BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037620
(330 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 240/326 (73%), Positives = 287/326 (88%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+KFGL+ L DFNRL+D LCKSRHVERAQEVFDKMK R+F PDIKSYTILLEGWGQ++N
Sbjct: 205 MEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQN 264
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL ++EVYREMKD+GFEPD V+YGI+INAHC A+RYD AVELF +MEA C P+PHI+CT
Sbjct: 265 LLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCT 324
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGLGSE+RL+EALQFF +SK GF PEAPTYNAVVG+YC SMR++DAYR++DEMRKCG
Sbjct: 325 LINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCG 384
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+GP TRTYDI+LHHLIKA RT+EAY VF+ MS +PG EP+VSTYEIVVRMFC +VDMA
Sbjct: 385 VGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMA 444
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R+WDEMKA+GVLP MHM+STLINSLC+E+KLD+ACKYF EMLD+GIRPP +FSNLKQ
Sbjct: 445 LRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQT 504
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L DEG ++ ++LAQK+DK+R T ++
Sbjct: 505 LLDEGKQDMVLILAQKLDKIRTTQVI 530
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Query: 134 ALQFFGQS-KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL FF + K++GF+ YNA++ A + + ++++MR G+ T+ ++
Sbjct: 128 ALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGL-LTQETFALIS 186
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+A + +EA F++M K G +P +S + ++ C + V+ A ++D+MK R
Sbjct: 187 RRYARARKVKEAVETFEKM-EKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKF 245
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ L+ E L + ++EM D G P + L A + AV
Sbjct: 246 RPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVE 305
Query: 313 LAQKIDKLRKTP 324
L K++ + P
Sbjct: 306 LFHKMEANKCMP 317
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 238/326 (73%), Positives = 288/326 (88%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+KFG + + DFNRL+DTLCKSR+V++AQEVFDKMK RF PDIKSYTILLEGWGQ +N
Sbjct: 216 MEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQN 275
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL +NEVYREM+D+GFEPDVV++GI+INAHC A++YDEA+ LF EMEA N KPSPH+FCT
Sbjct: 276 LLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCT 335
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGLGSEKRL EAL+FF Q K GF PEAPTYNAVVGAYCWSM++ AYRM+DEMRK G
Sbjct: 336 LINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSG 395
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+GPN+RTYDI+LHHLIK +++EAYSVF+RMSR+PG EPT+STY+I++RMFC +VDMA
Sbjct: 396 VGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMA 455
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++IWDEMKA+GVLP MH++STLINSLCHE KL+DAC YFQEMLD+GIRPP +FSNLKQA
Sbjct: 456 IQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQA 515
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L D+G ++TA+++A+KI KLRK PLV
Sbjct: 516 LLDDGRKDTALLMAEKIKKLRKAPLV 541
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQS-KKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
SP + ++ L + L AL FF + K++GF+ +YN ++ A + N + +
Sbjct: 121 SPALIVEVLKKLSNAGFL--ALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNL 178
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ +M++ GI + T+ ++ +A + +EA F++M K G + VS + ++ C
Sbjct: 179 VSDMKRKGI-LSRETFALITRRYARARKVKEAVESFEKM-EKFGFQMGVSDFNRLLDTLC 236
Query: 233 YNAQVDMAMRIWD-----------------------------------EMKARGVLPVMH 257
+ V A ++D EM+ G P +
Sbjct: 237 KSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVV 296
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ LIN+ C K D+A + F EM I+P +F L L E
Sbjct: 297 TFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSE 343
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 238/326 (73%), Positives = 288/326 (88%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+KFG + + DFNRL+DTLCKSR+V++AQEVFDKMK RF PDIKSYTILLEGWGQ +N
Sbjct: 216 MEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQN 275
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL +NEVYREM+D+GFEPDVV++GI+INAHC A++YDEA+ LF EMEA N KPSPH+FCT
Sbjct: 276 LLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCT 335
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGLGSEKRL EAL+FF Q K GF PEAPTYNAVVGAYCWSM++ AYRM+DEMRK G
Sbjct: 336 LINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSG 395
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+GPN+RTYDI+LHHLIK +++EAYSVF+RMSR+PG EPT+STY+I++RMFC +VDMA
Sbjct: 396 VGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMA 455
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++IWDEMKA+GVLP MH++STLINSLCHE KL+DAC YFQEMLD+GIRPP +FSNLKQA
Sbjct: 456 IQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQA 515
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L D+G ++TA+++A+KI KLRK PLV
Sbjct: 516 LLDDGRKDTALLMAEKIXKLRKAPLV 541
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQS-KKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
SP + ++ L + L AL FF + K++GF+ +YN ++ A + N + +
Sbjct: 121 SPALIVEVLKKLSNAGFL--ALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNL 178
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ +M++ GI + T+ ++ +A + +EA F++M K G + VS + ++ C
Sbjct: 179 VSDMKRKGI-LSRETFALITRRYARARKVKEAVESFEKM-EKFGFQMGVSDFNRLLDTLC 236
Query: 233 YNAQVDMAMRIWD-----------------------------------EMKARGVLPVMH 257
+ V A ++D EM+ G P +
Sbjct: 237 KSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVV 296
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ LIN+ C K D+A + F EM I+P +F L L E
Sbjct: 297 TFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSE 343
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 239/326 (73%), Positives = 284/326 (87%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+KFGLK E DFNRL+DTL KSR V AQ VFDKMK RRF PDIKSYTILLEGWGQ+KN
Sbjct: 207 MEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKN 266
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL ++EVYREMKD+GFEPDVV+YGI+INA+C ++YD+A+ELFREME+ NC+PSPHIFCT
Sbjct: 267 LLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCT 326
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGLGS +RLSEAL+FF +SK GF PE PTYNAVVGAYCWSMRI+DAYRM+DEMRK G
Sbjct: 327 LINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSG 386
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+GPN+RTYDI+LHHLIKA +T EA+SVF++MS + EPTVSTY+I+VRMFC +V+ A
Sbjct: 387 VGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESA 446
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++WD MKA+GV P MHM+S LINSLCHE+KLD ACKYFQEMLD+GIRPP LFS+LKQA
Sbjct: 447 IKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPAALFSHLKQA 506
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L ++G ++T V+LAQKIDKLRKTP V
Sbjct: 507 LIEDGRKDTVVLLAQKIDKLRKTPYV 532
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 93/225 (41%), Gaps = 38/225 (16%)
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQS-KKRGFEPEAPTYNAVVGA----------- 159
K SP + ++ L + L AL FF + K++GF +YNA++ +
Sbjct: 110 KVSPALVLEVLKRLSNAGAL--ALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIW 167
Query: 160 -----------------------YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
Y S ++ +A ++M K G+ + ++ +L LI
Sbjct: 168 NLVNDMKRKGVLTKETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLI 227
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K+ + A +VF +M + P + +Y I++ + + ++ EMK G P +
Sbjct: 228 KSRQVLSAQNVFDKMKIRRFV-PDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDV 286
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
Y LIN+ C K DDA + F+EM +P +F L L
Sbjct: 287 VTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGL 331
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/326 (73%), Positives = 281/326 (86%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+KFGLK E D NRL+DTLCKSR VERAQ VFDKM KR F DIKSYTILLEGWGQ+KN
Sbjct: 99 MEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKN 158
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EVY EMKD+GFEPDVV+YGI+INAHC ++RYD+A+ELF EMEA NCKPSPHI+CT
Sbjct: 159 LSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCT 218
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGLG+EKRLSEAL+FF SK GF PEAPTYNAVVGAYCWS R++D R +DEMRK G
Sbjct: 219 LINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGG 278
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+GP+ RTYDI+LHHLI+AG+T+ AYSVF++MS + G +P+VSTYEI+VRMFC +VDMA
Sbjct: 279 VGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCE-GCQPSVSTYEIIVRMFCNEDRVDMA 337
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++WD+MKA+G+LPVMHM+STLINSLCHE KLD+AC YFQEMLD+GIRPP QLFSNLKQ
Sbjct: 338 IKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQN 397
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L DEG ++T VV +K+DKLRK PLV
Sbjct: 398 LLDEGKKDTVVVFERKLDKLRKAPLV 423
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 5/177 (2%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQS-KKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
SP + + L + L AL FF + K++GF+ +Y+A++ + + N + +
Sbjct: 4 SPSLVFEALKKLSNAGAL--ALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNL 61
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ +M++ G+ N T+ ++ +A + +EA F +M K G + S ++ C
Sbjct: 62 VTDMKQKGL-LNKETFALISRRYARARKVKEAVDAFMKM-EKFGLKIESSDVNRLLDTLC 119
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ QV+ A ++D+M RG + + Y+ L+ E L + + EM D G P
Sbjct: 120 KSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEP 176
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 234/326 (71%), Positives = 282/326 (86%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++FG K E DFNRL+DTLCKSRHVE+A +VFDKMKKRRF PDIKSYTILLEGWG++ N
Sbjct: 217 MEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHN 276
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL ++EVY EMK DGFEPDVV+YGI+I+A+C AK+YD A+ELF EMEA NCKP+PH++CT
Sbjct: 277 LLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCT 336
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGLGSEKRLSEAL+FF + K GF PEAPTYN++VGAYCWSMRI+DA++++DEMRK
Sbjct: 337 LINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHS 396
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
GPN+RTYDI+LHHLIKA RT EAY F++MS +PG EPTVSTYEI+VRMFC +VD+A
Sbjct: 397 AGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLA 456
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++WD+MKA+GVLP MHMYS LI SLCH++KL +ACKYFQEMLD GIRPP ++FSNLKQA
Sbjct: 457 KQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQA 516
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L DEG + A+ LA+KI+KLR TPLV
Sbjct: 517 LLDEGKNDEALNLARKINKLRGTPLV 542
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 104/264 (39%), Gaps = 71/264 (26%)
Query: 106 MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS-KKRGFEPEAPTYNAVVGA----- 159
+E + K SP + ++ L + + AL FF + K++GF+ +YNA++ A
Sbjct: 114 LEDASIKVSPSLVVEVLKRLSNAGVI--ALSFFTWAEKQKGFKYNTESYNALIEALGKIK 171
Query: 160 -----------------------------YCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ + ++ +A + M + G T ++
Sbjct: 172 QFKLIRSLVNEMKSRKLLNKDTFALISRRHARARKVEEAIEAFERMEEFGFKLETSDFNR 231
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRK----------------------------------PG 216
+L L K+ E+A VF +M ++ G
Sbjct: 232 LLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDG 291
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
EP V TY I++ +C + D A+ ++ EM+A+ P H+Y TLIN L E +L +A
Sbjct: 292 FEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEAL 351
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQA 300
++F+ G P +++L A
Sbjct: 352 EFFERFKSCGFTPEAPTYNSLVGA 375
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/327 (67%), Positives = 271/327 (82%), Gaps = 1/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +GLK + DFN+L+D LCKS+ VE A EVFDKM+K R DPDIKSYTILLEGW QQ+N
Sbjct: 180 MEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQN 239
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ +NEV REM+D GF+ DVV+YGI++NAHC AK++DEA+ L+ EM+A +PSPH++CT
Sbjct: 240 LIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCT 299
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGLGS+KRL EAL+FF SK GF PEAPTYNAVVGAYCWS+R++DAYRM+ EM+KCG
Sbjct: 300 LINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCG 359
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP-GTEPTVSTYEIVVRMFCYNAQVDM 239
IGPN+RT+DIVLHHLIK R EEA SVF+RM+ G EP+VSTYEI+VRMFC +DM
Sbjct: 360 IGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDM 419
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ +WDEMK +G+LP MHM+STL+ +LCHE KLD+ACKYFQEMLD+GIRPP ++FS LK+
Sbjct: 420 AVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKE 479
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLV 326
AL D GME A+ KIDKLRK+PLV
Sbjct: 480 ALVDAGMEHVAMHFTLKIDKLRKSPLV 506
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 222/326 (68%), Positives = 271/326 (83%), Gaps = 4/326 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G K E DFNR++D L KSR+V AQ+VFDKMKK+RF+PDIKSYTILLEGWGQ+ N
Sbjct: 190 MEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 249
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL +NEVY EMKD+GFEPDVV+YGI+INA+C AK+YDEAV F EME NCKPSPHIFC+
Sbjct: 250 LLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCS 309
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGLGSEK+L++AL+FF +SK GF EAPTYNA+VGAYCWS R+ DA++ +DEMR G
Sbjct: 310 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKG 369
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
IGPN RTYDI+LHHLI+ RT+EAY V+++MS EPTVSTYEI+VRMFC ++DMA
Sbjct: 370 IGPNARTYDIILHHLIRMQRTKEAYEVYQKMS----CEPTVSTYEIMVRMFCNKERLDMA 425
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++IWDEMK +GVLP MHM+S+LI +LCHE+KLD+AC+YF EMLD+GIRPPG LFS LKQ
Sbjct: 426 IKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHLFSRLKQT 485
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L DEG ++ LA K+D+LRKT LV
Sbjct: 486 LLDEGRKDKVADLAVKMDRLRKTQLV 511
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 219/326 (67%), Positives = 271/326 (83%), Gaps = 4/326 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++FG K E DFNR++DTL KSR+V AQ+VFDKMKK+RF+PDIKSYTILLEGWGQ+ N
Sbjct: 188 MEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELN 247
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL ++EV REMKD+GFEPDVV+YGI+INAHC AK+Y+EA+ F EME NCKPSPHIFC+
Sbjct: 248 LLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCS 307
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGLGSEK+L++AL+FF +SK GF EAPTYNA+VGAYCWS R+ DAY+ +DEMR G
Sbjct: 308 LINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG 367
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+GPN RTYDI+LHHLI+ R++EAY V++ MS EPTVSTYEI+VRMFC ++DMA
Sbjct: 368 VGPNARTYDIILHHLIRMQRSKEAYEVYQTMS----CEPTVSTYEIMVRMFCNKERLDMA 423
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++IWDEMK +GVLP MHM+S+LI +LCHE+KLD+AC+YF EMLD+GIRPPG +FS LKQ
Sbjct: 424 IKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQT 483
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L DEG ++ L K+D+LRKT LV
Sbjct: 484 LLDEGRKDKVTDLVVKMDRLRKTQLV 509
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 270/327 (82%), Gaps = 1/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSR-HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M+K+GLK ++ DFN+LID LCKS+ HVE+AQE+FDKM++ +P++KSYTIL+EGW QQ+
Sbjct: 180 MEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQ 239
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
NLL ++EV REMKDDGF+PDVV+YGI+INA+C AK+YDEA+ ++ +M + N PSPHI+C
Sbjct: 240 NLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYC 299
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T I GLG+ R+ EA +FF +SK GF PEAPTYNAVV AYCWSMRI+DAYR++ EM++
Sbjct: 300 TFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKEL 359
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GIGPN RTYDI+L HLIK GRT+EAYSVF+RMS + G EP+VSTY I+VRMFC Q+DM
Sbjct: 360 GIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDM 419
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
AM +W+EMK +G+LP +HM+STLI SLCHE+KLDDAC+YFQ+MLD+GIRP +FS K+
Sbjct: 420 AMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKR 479
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLV 326
AL GME T + A+K+DKLR TPL+
Sbjct: 480 ALMAAGMENTVIHFAKKVDKLRNTPLI 506
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 254/326 (77%), Gaps = 2/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQK 59
M FGLK +L D+N LID L KS+ V++A +F +MK+ RF PD+K+YT+L+EGWG +K
Sbjct: 239 MAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEK 298
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+LL + VY+EM D G +PDVV+YG++I++ C + + DEA+++FREME C PSPH++C
Sbjct: 299 DLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYC 358
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGLGSE+RL EAL++F SK GF E PT NAVVGAYC S + A++M+DEMRK
Sbjct: 359 MLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKS 418
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GIGPN+RTYDI+LHHLIK+ + EEAY+VF+ MS K G EP ++TY ++V MFC N +VD+
Sbjct: 419 GIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMS-KDGCEPQLNTYTMMVGMFCSNERVDV 477
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+++W++MK +GVLP MHM+S LIN LC E++L++AC YFQEMLD GIRPPGQLFSNLK+
Sbjct: 478 ALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKE 537
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPL 325
AL + G A +A K+D+LRKTP+
Sbjct: 538 ALIEGGRISLAQEMALKLDELRKTPM 563
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 7/212 (3%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP--SPHIFCTLINGLGSEK 129
+ GF S+ +I A K++ L +EA C+ S F ++ +
Sbjct: 171 RQQGFVYTADSFHNLIEALGKIKQFRLVWSL---VEAMRCRGLLSKDTFRLIVRRYARAR 227
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTY 188
++ EA++ F + G + + YN ++ S ++ A+ + EM++ G P+ +TY
Sbjct: 228 KVKEAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTY 287
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+++ SV++ M G +P V Y +++ FC + + D A++++ EM+
Sbjct: 288 TVLMEGWGHEKDLLMLKSVYQEM-LDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREME 346
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
G +P H+Y LIN L E++LD+A KYF+
Sbjct: 347 TNGCMPSPHVYCMLINGLGSEERLDEALKYFE 378
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 250/326 (76%), Gaps = 2/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQK 59
M FGLK +L D+N LID L KS+ V++A +F +MK+ RF PD+K+YT+L+EGWG +K
Sbjct: 221 MSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEK 280
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+LL + VY+EM D G +PDVV+YG +I++ C + + DEA+++FREMEA C PSPH++C
Sbjct: 281 DLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYC 340
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGLGSE+RL EAL++F SK GF E PT NAVVGAYC S + A++M+DEMRK
Sbjct: 341 MLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKT 400
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GIGPN RTYDI+L +LIK+ + EEAY+VF+RM + G EP ++TY ++V MFC N +VDM
Sbjct: 401 GIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGME-GCEPQLNTYTMMVGMFCSNERVDM 459
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+++W +MK +GVLP MHM+S+LIN LC E++L++AC YFQEMLD GIRPPGQLFSNLK+
Sbjct: 460 ALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKE 519
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPL 325
AL + G A +A K+D LRKTP
Sbjct: 520 ALIEGGRISLAQDMALKLDTLRKTPF 545
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 7/212 (3%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP--SPHIFCTLINGLGSEK 129
+ GF S+ +I A K++ L +EA C+ S F ++ +
Sbjct: 153 RQQGFRYTAESFHNLIEALGKIKQFRLVWSL---VEAMRCRGLLSKDTFRLIVRRYARAR 209
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTY 188
++ EA++ F + G + + YN ++ S ++ A+ + EM++ G P+ +TY
Sbjct: 210 KVKEAVETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTY 269
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+++ SV++ M G +P V Y ++ FC + + D A++++ EM+
Sbjct: 270 TVLMEGWGHEKDLLMLKSVYQEM-LDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREME 328
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
A G +P H+Y LIN L E++LD+A KYF+
Sbjct: 329 ANGCMPSPHVYCMLINGLGSEERLDEALKYFE 360
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
F LI LG K+ + RG + T+ +V Y + ++ +A ++M
Sbjct: 164 FHNLIEALGKIKQFRLVWSLVEAMRCRGLLSK-DTFRLIVRRYARARKVKEAVETFEKMS 222
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G+ + Y+ ++ L K+ + ++A+++FK M R P + TY +++ + + +
Sbjct: 223 SFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDL 282
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
M ++ EM G+ P + Y TLI+S C K D+A K F+EM G P ++ L
Sbjct: 283 LMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCML 342
Query: 298 KQALRDE 304
L E
Sbjct: 343 INGLGSE 349
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/326 (57%), Positives = 252/326 (77%), Gaps = 2/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQK 59
M FGLK EL D+N LIDTL KS+ V++AQ ++ +MK++ +F PD+K+YT+L+EGWG +K
Sbjct: 225 MSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEK 284
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+LL + +Y+EM D G PDVV+YG++I+A C + + DEA+++F EMEA+ C PSPH++C
Sbjct: 285 DLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYC 344
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGLGSE+RL EAL++F Q KK GF E PT NAVVGAYC + + A++M+DEMR+C
Sbjct: 345 MLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMREC 404
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
IGPN+RTYD++LH+LIK+ + EEAY+VF+RM G EP ++TY ++V MFC N +VDM
Sbjct: 405 KIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMD-GCEPQLNTYTMMVGMFCSNGRVDM 463
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ +W +M RGVLP MHM+S LIN LC E++L++AC YFQEMLD GIRPPGQLFSNLK+
Sbjct: 464 ALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKE 523
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPL 325
AL + G A +A K+D +RKTP
Sbjct: 524 ALVEGGRISLAQEMASKLDAIRKTPF 549
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 13/216 (6%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP--SPHIFCTLINGLGSEK 129
+ +GF + +I A K++ L +E C+ S F ++ +
Sbjct: 157 RQEGFSYTAEGFHNLIEALGKIKQFKLVWSL---VETMRCRGLLSKDTFKLIVRRYARAR 213
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTY 188
++ EA++ F + G + E YN ++ S ++ A + EM++ G P+ +TY
Sbjct: 214 KVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTY 273
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRK---PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
+ L++ E+ + K M ++ G P V Y +++ FC + + D A++++
Sbjct: 274 TV----LMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFY 329
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
EM+A G +P H+Y LIN L E++LD+A KYF++
Sbjct: 330 EMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQ 365
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/326 (56%), Positives = 254/326 (77%), Gaps = 2/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQK 59
M FGLK +L D+N LID L KS+ V++A +F +MK++ RF PD+K+YT+L+EGWG +K
Sbjct: 214 MSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEK 273
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+LL + VY+EM D G +PDVV+YG++I+A C + + DEA+++F EME + C PSPH++C
Sbjct: 274 DLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYC 333
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGLGS +RL EAL++F SK+ GF E PT NAV+GAYC ++ + A++M+DEMRK
Sbjct: 334 MLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKS 393
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GIGPNTRTYDI+L+HLIK+ + EEAY++F+RM R G EP ++TY ++V MFC N +VDM
Sbjct: 394 GIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERD-GCEPELNTYTMMVGMFCSNERVDM 452
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+++W +MK +GVLP MHM+S LIN LC E++L++AC YFQEMLD GIRPPGQLFSNLK+
Sbjct: 453 ALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKE 512
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPL 325
AL + G A + Q+++ LR+TP+
Sbjct: 513 ALVEGGRITLAQEVTQRLEMLRRTPM 538
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ GF + +I A K++ L M +C S F ++ +++
Sbjct: 146 RQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCL-SKDTFKIIVRRYARARKV 204
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYDI 190
EA++ F + G + + YN ++ S ++ A+ + EM++ G P+ +TY +
Sbjct: 205 KEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTV 264
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ +V++ M G +P V Y +++ FC + + D A++++ EM+
Sbjct: 265 LMEGWGHEKDLLMLKAVYQEM-LDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEES 323
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
G +P H+Y LIN L ++LD+A KYFQ
Sbjct: 324 GCMPSPHVYCMLINGLGSMERLDEALKYFQ 353
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/326 (56%), Positives = 251/326 (76%), Gaps = 2/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQK 59
M FGLK EL D+N LIDTL KS+ V++AQ ++ +MK++ +F PD+K+YT+L+EGWG +K
Sbjct: 221 MSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEK 280
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+LL + +Y+EM D G PDVV+YG++I+A C + + DEA+++F EMEA+ C PSPH++C
Sbjct: 281 DLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYC 340
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGLGSE+RL EAL++F KK GF E PT NAVVGAYC + + A++M+DEMRKC
Sbjct: 341 MLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKC 400
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+GPN+RTYD++LH+LIK+ + EEAY++F+RM G EP ++TY ++V MFC N +VDM
Sbjct: 401 KVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGID-GCEPQLNTYTMMVGMFCSNGRVDM 459
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+++W +M +GVLP MHM+S LIN LC E++L++AC YFQEMLD GIRPPGQLFSNLK+
Sbjct: 460 ALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKE 519
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPL 325
AL G A +A K+D +RKTP
Sbjct: 520 ALVQGGRISLAQEVALKLDAIRKTPF 545
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP--SPHIFCTLINGLGSEK 129
+ +GF + +I A K++ L +E C+ S F ++ +
Sbjct: 153 RQEGFSYTAEGFHNLIEALGKIKQFRLVWSL---VETMRCRGLLSKDTFKLIVRRYARAR 209
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTY 188
++ EA++ F + G + E YN ++ S ++ A + EM++ G P+ +TY
Sbjct: 210 KVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTY 269
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRK---PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
+ L++ E+ + K M ++ G P V Y +++ FC + + D A++++
Sbjct: 270 TV----LMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFY 325
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
EM+A G +P H+Y LIN L E++LD+A KYF+
Sbjct: 326 EMEASGCMPSPHVYCMLINGLGSEERLDEALKYFE 360
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 182/326 (55%), Positives = 254/326 (77%), Gaps = 2/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQK 59
M FGLK +L D+N LID L KS+ V++A +F +MK++ RF PD+K+YT+L+EGWG +K
Sbjct: 214 MSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEK 273
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+LL + VY+EM D G +PDVV+YG++I+A C + + DEA+++F EME + C PSPH++C
Sbjct: 274 DLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYC 333
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGLGS +RL EAL++F SK+ GF E PT NAV+GAYC ++ + A++M+DEMRK
Sbjct: 334 MLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKS 393
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GIGPNTRTYDI+L+HLIK+ + EEAY++F+RM R G EP ++TY ++V MFC N +VDM
Sbjct: 394 GIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERD-GCEPELNTYTMMVGMFCSNERVDM 452
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+++W +MK +GVLP MHM+S LIN LC +++L++AC YFQEMLD GIRPPGQLFSNLK+
Sbjct: 453 ALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKE 512
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPL 325
AL + G A + Q+++ LR+TP+
Sbjct: 513 ALVEGGRITLAQEVTQRLEMLRRTPM 538
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ GF + +I A K++ L M +C S F ++ +++
Sbjct: 146 RQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCRSCL-SKDTFKIIVRRYARARKV 204
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYDI 190
EA++ F + G + + YN ++ S ++ A+ + EM++ G P+ +TY +
Sbjct: 205 KEAVETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTV 264
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ +V++ M G +P V Y +++ FC + + D A++++ EM+
Sbjct: 265 LMEGWGHEKDLLMLKAVYQEM-LDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEES 323
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
G +P H+Y LIN L ++LD+A KYFQ
Sbjct: 324 GCMPSPHVYCMLINGLGSMERLDEALKYFQ 353
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 216/327 (66%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+G+ L FN L+ LCKS++V +AQE+FDKM R F PD K+Y+ILLEGWG+ N
Sbjct: 161 MEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSR-FSPDAKTYSILLEGWGRAPN 219
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L M EVY EM D G EPD+V+YGIM+++ C R +EAV + ++M + C+P+ +I+
Sbjct: 220 LPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSV 279
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G E R+ +A+ F +K G P+ YNA+V A+C + + +A+R++++M G
Sbjct: 280 LVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHG 339
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I N+RT++I+L+HLI GR +EAY VF+RM + +P TY ++++MFC N +V+MA
Sbjct: 340 ITTNSRTWNIILNHLISLGRDDEAYKVFRRMIK--CCQPDCDTYTMMIKMFCENDKVEMA 397
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++W M+ + LP MH +S LIN LC + ++ AC ++M++ GIRPPG F L+Q
Sbjct: 398 LKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQL 457
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L EG ++ L +K++ L + PL D
Sbjct: 458 LLKEGRKDVLDFLVEKMNILIQEPLFD 484
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 133/266 (50%), Gaps = 3/266 (1%)
Query: 45 IKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR 104
++SY ++ + + M +V M+ +G +V ++GI++ + A++ DEAV F
Sbjct: 101 VRSYHTVVASLAKIRQYQLMWDVVAVMRREG-AVNVETFGIIMRKYARAQKVDEAVYTFN 159
Query: 105 EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
ME P+ F +L+ L K + +A + F + R F P+A TY+ ++ + +
Sbjct: 160 VMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSR-FSPDAKTYSILLEGWGRAP 218
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+ + EM G P+ TY I++ L K GR EEA V + M+ + G +PT Y
Sbjct: 219 NLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSR-GCQPTTYIY 277
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++V + +++ A+ + +M+ G++P + +Y+ L+++ C K ++A + +M
Sbjct: 278 SVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEG 337
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETA 310
GI + ++ + L G ++ A
Sbjct: 338 HGITTNSRTWNIILNHLISLGRDDEA 363
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 213/327 (65%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+G+ L FN L+ LCKS++V +AQE+FDKM R F+PD K+Y+ILLEGWG+ N
Sbjct: 163 MEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGR-FNPDAKTYSILLEGWGKAPN 221
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L M EVY EM D G +PD+V+YGIM+++ C R +EAV + ++M + C+P+ I+
Sbjct: 222 LPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSV 281
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G E R+ +A+ F +K G P+ YNA+V A+C + +A+R+MD+M G
Sbjct: 282 LVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHG 341
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN+RT++I+L+ LI G+ +EAY VF+RM ++ +P TY ++++MFC N V+MA
Sbjct: 342 IAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR--CQPDSDTYTMMIKMFCENDNVEMA 399
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++W M+ + LP MH +S LIN LC + ++ AC ++M++ GIRPPG F L+Q
Sbjct: 400 LKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQL 459
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L EG ++ L K+ L + PL D
Sbjct: 460 LLKEGRKDVLEFLVDKMKILIQEPLFD 486
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 138/276 (50%), Gaps = 3/276 (1%)
Query: 35 KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAK 94
K K+ + I+SY ++ + + M +V M+ +G +V ++GI++ + A+
Sbjct: 93 KQKRGGCNHTIRSYHTVVASLAKIRQYQLMWDVVAIMRREGV-VNVETFGIIMRKYARAQ 151
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
++DEAV F ME P+ F +L+ L K + +A + F + R F P+A TY+
Sbjct: 152 KFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGR-FNPDAKTYS 210
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ + + + + EM G P+ TY I++ L K GR EEA V + MS +
Sbjct: 211 ILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSR 270
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G +PT Y ++V + +++ A+ + +M+ G++P + +Y+ L+ + C K ++
Sbjct: 271 -GCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFEN 329
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
A + +M GI P + ++ + L G ++ A
Sbjct: 330 AFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEA 365
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 207/325 (63%), Gaps = 3/325 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK+ + L FN L+ LCKS++V +AQE+FD +K R F PD K+Y+ILLEGWG+ N
Sbjct: 116 MDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDR-FVPDSKTYSILLEGWGKDPN 174
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++REM +G PD+V+YGIM++ C A R DEA+ + EM++T CKP+P I+
Sbjct: 175 LPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSV 234
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G E R+ +A+ F + + G EP+ YNA++GA+C + R+ + YR+++EM G
Sbjct: 235 LVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKG 294
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN+RT++I+L LI G T+EAY VF RM + EP TY ++++MFC ++ A
Sbjct: 295 VTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKV--CEPDADTYTMMIKMFCERDELKKA 352
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++W MK + +P MH + LIN LC + + AC +EM++ GIRP G F L+Q
Sbjct: 353 LKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQL 412
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPL 325
L EG E+ L +KI+ L PL
Sbjct: 413 LIKEGREDVLKFLQKKINVLVNDPL 437
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 213/327 (65%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+++G+ L FN L+ LCKS++V +AQE+FDKM R F PD K+Y+ILLEGWG+ N
Sbjct: 164 MERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAPN 222
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L M EVY +M G +PD+V+YGIM++A C R +EAV + ++M + C+P+ I+
Sbjct: 223 LPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSV 282
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G + R+ +A+ F +K G P+ YNA+V A+C + ++A+R+MD+M G
Sbjct: 283 LVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHG 342
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN+RT++I+L+ LI G+ +EAY VF+ M ++ +P TY ++++MFC N +++MA
Sbjct: 343 ISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKR--CKPDSDTYTMMIKMFCENDKIEMA 400
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++W M+ + LP MH +S LIN LC + ++ AC ++M++ GIRPPG F L+Q
Sbjct: 401 LKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQL 460
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L EG ++ L +K+ L + PL D
Sbjct: 461 LLKEGRKDVLDFLVEKMKMLIQEPLFD 487
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 133/266 (50%), Gaps = 3/266 (1%)
Query: 45 IKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR 104
++SY ++ + + M +V M+ +G +V ++ I++ + A+++DEAV F
Sbjct: 104 VRSYHTVVASLAKIRQYQLMWDVVAVMRKEGV-ANVETFSIIMRKYARAQKFDEAVYTFN 162
Query: 105 EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
ME + F +L+ L K + +A + F + R F P+A TY+ ++ + +
Sbjct: 163 IMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAP 221
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+ + +M G P+ TY I++ L K GR EEA V + MS + G +PT Y
Sbjct: 222 NLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSR-GCQPTTFIY 280
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++V + + +++ A+ + +M+ G++P + +Y+ L+ + C K D+A + +M
Sbjct: 281 SVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEG 340
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETA 310
GI P + ++ + L G ++ A
Sbjct: 341 HGISPNSRTWNIILNTLISLGKDDEA 366
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 213/327 (65%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+G+ L FN L+ LCKS++V +AQE+FDKM R F PD K+Y+ILLEGWG+ +
Sbjct: 166 MEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAPS 224
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L M EVY +M G +PD+V+YGIM++A C R +EAV + ++M + C+P+ I+
Sbjct: 225 LPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSI 284
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G + R+ +A+ F +K G P+ YNA++ A+C + +A+R+MD+M+ G
Sbjct: 285 LVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHG 344
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN+RT++I+L+ LI G+ +EAY VF+ M ++ +P TY ++++MFC N +++MA
Sbjct: 345 ISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKR--CKPDSDTYTMMIKMFCENDKIEMA 402
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++W M+ + LP MH +S LIN LC + ++ AC ++M++ GIRPPG F L+Q
Sbjct: 403 LKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQL 462
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L EG ++ L +K+ L + PL D
Sbjct: 463 LLKEGRKDVLDFLVEKMKILAQEPLFD 489
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 134/266 (50%), Gaps = 3/266 (1%)
Query: 45 IKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR 104
++SY ++ + + M +V M+ +G +V ++GI++ + A++ DEAV F
Sbjct: 106 VRSYHTVVTSLAKIRQYQLMWDVVAIMRKEGV-ANVETFGIIMRKYARAQKLDEAVYTFN 164
Query: 105 EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
ME + F +L++ L K + +A + F + R F P+A TY+ ++ + +
Sbjct: 165 VMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAP 223
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+ + +M G P+ TY I++ L K GR EEA V + MS + G +PT Y
Sbjct: 224 SLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSR-GCQPTTFIY 282
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
I+V + + +++ A+ + +M+ G++P + +Y+ LI + C K ++A + +M
Sbjct: 283 SILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQG 342
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETA 310
GI P + ++ + L G ++ A
Sbjct: 343 HGISPNSRTWNIILNTLISLGKDDEA 368
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 208/327 (63%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+ + L FN L LCKS++V +AQE+FD K RF PD K+YTILLEGWG+ N
Sbjct: 116 MEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDS-SKDRFVPDSKTYTILLEGWGKTPN 174
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++REM D G PD+V+YGIM++ C A R DEA+++ +EM+ T CKP+ I+
Sbjct: 175 LPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSV 234
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ G E R+ +A+ F +K G + + YNA++GA+C + + YR+++EM G
Sbjct: 235 LIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKG 294
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN+RT +I+L++LI G T+EA+ VF+RM + EP TY ++++MFC +++MA
Sbjct: 295 MQPNSRTLNIILNNLIARGETDEAFRVFRRMIKV--CEPDADTYTMMIKMFCERNELEMA 352
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++W MK + +P MH +S LIN LC E + AC ++M++ GIRP G F L+
Sbjct: 353 LKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHL 412
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L EG E+ L QKI+ L K PL D
Sbjct: 413 LIKEGREDVLEFLQQKINVLIKEPLWD 439
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 214/327 (65%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+G+ L FN L+ LCKS++V +AQE+F++M R F PD K+Y+ILLEGWG+ N
Sbjct: 162 MEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGR-FSPDAKTYSILLEGWGRAPN 220
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L M +VY +M D G +PD+V+YGIM+++ C R +EAV + ++M + C+P+ I+
Sbjct: 221 LPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSV 280
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G E R+ +A+ F +K G P+ YNA+V A+C + ++A+R+MD+M G
Sbjct: 281 LVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHG 340
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN+RT++I+L+ LI G+ +EAY VF+RM ++ +P TY ++++MFC N +++MA
Sbjct: 341 ITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR--CQPDSDTYTMMIKMFCENDRLEMA 398
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++W M+ + LP MH +S LIN LC + ++ AC ++M++ GIRPPG F L+Q
Sbjct: 399 LKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQL 458
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L EG ++ L K+ L + PL D
Sbjct: 459 LLKEGRKDVLEFLVDKMKILIQEPLFD 485
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 133/266 (50%), Gaps = 3/266 (1%)
Query: 45 IKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR 104
++S+ ++ + + M +V M+ G +V ++GI++ + A++ DEAV F
Sbjct: 102 VRSFHTVVASLAKIRQYQLMWDVVAIMRRQGV-VNVETFGIIMRKYARAQKVDEAVYTFN 160
Query: 105 EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
ME P+ F +L+ L K + +A + F Q R F P+A TY+ ++ + +
Sbjct: 161 VMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGR-FSPDAKTYSILLEGWGRAP 219
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+ ++ +M G P+ TY I++ L K GR EEA V + M+ + G +PT Y
Sbjct: 220 NLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSR-GCQPTTFIY 278
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++V + +++ A+ + +M+ G++P + +Y+ L+ + C K D+A + +M
Sbjct: 279 SVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEG 338
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETA 310
GI P + ++ + L G ++ A
Sbjct: 339 HGITPNSRTWNIILNKLISLGKDDEA 364
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 169 AYRMMDEMRK----CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
AYR + RK G R++ V+ L K + + + V M R+ V T+
Sbjct: 82 AYRFFEWARKQRRGGGCAHTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQGVV--NVETF 139
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
I++R + +VD A+ ++ M+ GV+P + +++L+ +LC + A + F++M
Sbjct: 140 GIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQM 197
>gi|388515597|gb|AFK45860.1| unknown [Medicago truncatula]
Length = 197
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 129/196 (65%), Positives = 160/196 (81%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ EA +FF +SK GF PEAPTYNAVV AYCWSMRI+DAYR++ EM++ GIGPN RTYDI
Sbjct: 1 MDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDI 60
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L HLIK GRT+EAYSVF+RMS + G EP+VSTY I+VRMFC Q+DMAM +W+EMK +
Sbjct: 61 ILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDK 120
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G+LP +HM+STLI SLCHE+KLDDAC+YFQ+MLD+GIRP +FS K+AL GME T
Sbjct: 121 GILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTV 180
Query: 311 VVLAQKIDKLRKTPLV 326
+ A+K+DKLR TPL+
Sbjct: 181 IHFAKKVDKLRNTPLI 196
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G E P +N ++ C S ++ A + +MK+ P+ ++Y I+L +
Sbjct: 15 GFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEA 74
Query: 65 NEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V++ M + G EP V +Y IM+ C+ + D A+ ++ EM+ P H+F TLI
Sbjct: 75 YSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLII 134
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
L E +L +A ++F Q G P A ++A
Sbjct: 135 SLCHENKLDDACRYFQQMLDVGIRPTANMFSA 166
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A E F+K K F P+ +Y ++ + + + EMK+ G P+ +Y I
Sbjct: 1 MDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDI 60
Query: 86 MINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
++ R EA +F+ M + T C+PS + ++ +E +L A+ + + K +
Sbjct: 61 ILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDK 120
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
G P ++ ++ + C +++DA R +M GI P + L+ AG
Sbjct: 121 GILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAG 175
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 209/327 (63%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+ L L FN L+ LCKS++V +AQEVF+ M+ R F PD K+Y+ILLEGWG++ N
Sbjct: 158 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPN 216
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L EV+REM D G PD+V+Y IM++ C A R DEA+ + R M+ + CKP+ I+
Sbjct: 217 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 276
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G+E RL EA+ F + ++ G + + +N+++GA+C + R+ + YR++ EM+ G
Sbjct: 277 LVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKG 336
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN+++ +I+L HLI+ G +EA+ VF++M + EP TY +V++MFC +++ A
Sbjct: 337 VTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK--VCEPDADTYTMVIKMFCEKKEMETA 394
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++W M+ +GV P MH +S LIN LC E AC +EM+++GIRP G F L+Q
Sbjct: 395 DKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQL 454
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L E E+ L +K++ L PL D
Sbjct: 455 LIKEEREDVLKFLNEKMNVLVNEPLCD 481
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 3/230 (1%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
K +E V +Y +MI + ++Y +L M + FC ++ +++
Sbjct: 90 KQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK-MLNVETFCIVMRKYARAQKV 148
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA+ F +K P +N ++ A C S + A + + MR P+++TY I+
Sbjct: 149 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSIL 207
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L K +A VF+ M G P + TY I+V + C +VD A+ I M
Sbjct: 208 LEGWGKEPNLPKAREVFREMI-DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI 266
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P +YS L+++ E++L++A F EM G++ +F++L A
Sbjct: 267 CKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 316
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 209/327 (63%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+ L L FN L+ LCKS++V +AQEVF+ M+ R F PD K+Y+ILLEGWG++ N
Sbjct: 194 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPN 252
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L EV+REM D G PD+V+Y IM++ C A R DEA+ + R M+ + CKP+ I+
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 312
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G+E RL EA+ F + ++ G + + +N+++GA+C + R+ + YR++ EM+ G
Sbjct: 313 LVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKG 372
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN+++ +I+L HLI+ G +EA+ VF++M + EP TY +V++MFC +++ A
Sbjct: 373 VTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK--VCEPDADTYTMVIKMFCEKKEMETA 430
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++W M+ +GV P MH +S LIN LC E AC +EM+++GIRP G F L+Q
Sbjct: 431 DKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQL 490
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L E E+ L +K++ L PL D
Sbjct: 491 LIKEEREDVLKFLNEKMNVLVNEPLCD 517
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 3/230 (1%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
K +E V +Y +MI + ++Y +L M + FC ++ +++
Sbjct: 126 KQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK-MLNVETFCIVMRKYARAQKV 184
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA+ F +K P +N ++ A C S + A + + MR P+++TY I+
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSIL 243
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L K +A VF+ M G P + TY I+V + C +VD A+ I M
Sbjct: 244 LEGWGKEPNLPKAREVFREMI-DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI 302
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P +YS L+++ E++L++A F EM G++ +F++L A
Sbjct: 303 CKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 352
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 207/327 (63%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+ +K + FN L+ LCKS++V +AQE+FD MK + F PD K+Y+IL+EGWG+ N
Sbjct: 116 MEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQ-FVPDSKTYSILIEGWGRAPN 174
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+YREM D G PD V+Y IM++ C A R DEAVE+ +EM+ NCKPS I+
Sbjct: 175 LPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSV 234
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G E R+ +A+ F + ++ G + YNA++ A+C + ++ + YR++ +M G
Sbjct: 235 LVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKG 294
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN+RT +I+++ LI G T+EA+ +F+RM + EP V +Y ++++MFC ++DMA
Sbjct: 295 VNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKV--CEPDVDSYTMIIKMFCGRKELDMA 352
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++IW MK + +P MH +S LIN LC AC +EM++ GIRP G F L+
Sbjct: 353 LKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHL 412
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L EG ++ L +K++ L K PL D
Sbjct: 413 LIKEGRKDVLKFLQEKMNLLVKEPLCD 439
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 142/284 (50%), Gaps = 3/284 (1%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
K+R + +++Y ++E + + + ++ M++ +V ++ I++ + A++
Sbjct: 48 KQRNYVHSVRAYHSMIESLAKIRQYQMVWDLVNAMRNKEI-LNVEAFCIIMRKYARAQKV 106
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+EAV F ME N KP+ F L++ L K + +A + F K + F P++ TY+ +
Sbjct: 107 EEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQ-FVPDSKTYSIL 165
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ + + + A + EM G P+ TY I++ L KAGR +EA + K M
Sbjct: 166 IEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYN-N 224
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+P+ Y ++V + +++ A+ + EM+ GV+ + Y+ LI++ C +K+ +
Sbjct: 225 CKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVY 284
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+ ++M G+ P + + + +L G + A + +++ K+
Sbjct: 285 RVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIKV 328
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/328 (41%), Positives = 212/328 (64%), Gaps = 3/328 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+ + L FN L+ LCKS++V +AQE+F+ MK + F PD K+Y+ILLEGWG+ N
Sbjct: 137 MEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQ-FIPDSKTYSILLEGWGKAPN 195
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++REM D G +PD+V+YGIM++ C A R DEAV + +EM+++ CKP+ I+
Sbjct: 196 LPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSV 255
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G E R+ +A+ F ++ E + YNA++GA+C ++ +AYR+++EM G
Sbjct: 256 LVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKG 315
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN+RT +I+L+ LI G T+EA+ VF+RM + +P TY ++++MFC N +++MA
Sbjct: 316 IRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV--CDPDADTYTMMIKMFCENDKLEMA 373
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++W M+ + +P MH +S LIN LC + AC +EM++ GIRP F LKQ
Sbjct: 374 LKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQL 433
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVDR 328
L EG E+ L +K++ L K PL D+
Sbjct: 434 LIKEGREDVLEFLQEKMNLLVKEPLCDQ 461
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/327 (40%), Positives = 208/327 (63%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+ L L FN L+ LCKS++V +AQE+F+ M+ R F PD K+Y+ILLEGWG++ N
Sbjct: 159 MEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRDR-FTPDSKTYSILLEGWGKEPN 217
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L EV+REM D G PD+V+Y IM++ C A R DEA+ + R M+ + CKP+ I+
Sbjct: 218 LPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 277
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G+E RL EA+ F + ++ G + + +N+++GA+C + R+ + YR++ EM+ G
Sbjct: 278 LVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKG 337
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN+++ +I+L HLI G +EA+ VF++M + EP TY ++++MFC +++ A
Sbjct: 338 VTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIK--VCEPDADTYTMMIKMFCEKKEMETA 395
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++W M+ +GV P MH +S LIN LC E AC +EM+++GIRP G F L+Q
Sbjct: 396 DKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQL 455
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L E E+ L +K++ L PL D
Sbjct: 456 LLKEDREDVLKFLNEKMNVLVNEPLCD 482
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 3/230 (1%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
K +E V +Y +MI + ++Y +L M + FC ++ +++
Sbjct: 91 KQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKKKM-LNVETFCIVMRKYARAQKV 149
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA+ F +K P +N ++ A C S + A + + MR P+++TY I+
Sbjct: 150 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENMRD-RFTPDSKTYSIL 208
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L K +A VF+ M G+ P + TY I+V + C +VD A+ I M
Sbjct: 209 LEGWGKEPNLPKAREVFREMV-DAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI 267
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P +YS L+++ E +L++A F EM G++ +F++L A
Sbjct: 268 CKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAF 317
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 207/327 (63%), Gaps = 3/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK+ + L FN L+ LCKS +V +AQE+FD MK + F PD KSY+ILLEGWG+ N
Sbjct: 138 MDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQ-FVPDEKSYSILLEGWGKAPN 196
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L EV+REM + G +PDVV+YGIM++ C A R DEAVE+ +EM+ NC+P+ I+
Sbjct: 197 LPRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSV 256
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ G E R+ +A+ F + K+G + + YNA++GA+C + + +R++ EM G
Sbjct: 257 LVHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNG 316
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN+RT ++++ +I G+T+ A+ VF RM + EP TY ++++MFC +++MA
Sbjct: 317 VAPNSRTCNVIISSMIGQGQTDRAFRVFCRMIKL--CEPDADTYTMMIKMFCEKNELEMA 374
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++IW MK++ +P MH +S LI LC +D AC +EM++ GIRP F L+Q
Sbjct: 375 LKIWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQL 434
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L EG E+ L +K++ L K PL D
Sbjct: 435 LIKEGREDVLKFLHEKMNLLVKEPLYD 461
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 174/317 (54%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + N LI+ LC+ HV+ A V+ KM K PD+ ++T L+ G +
Sbjct: 119 MDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGK 178
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+Y EM G EPDV+SY +IN C++ + AV +F++ME CKP+ + T
Sbjct: 179 IKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNT 238
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ +++A+ F + RG P+A TYN++V C ++N+A R+ M + G
Sbjct: 239 IIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNG 298
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+I++ L K +A M + G P V TY ++ CY Q++ A
Sbjct: 299 CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQ-GIPPDVVTYTTILHGLCYLGQLNEA 357
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R++ +M+ +G P + Y+T+I+SLC + ++DA ++ EM+D GI P +S +
Sbjct: 358 IRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHG 417
Query: 301 LRDEGMEETAVVLAQKI 317
+ G + A L +++
Sbjct: 418 FCNLGQLDEATQLFKEM 434
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 170/326 (52%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K ++ +N +ID+LCK R V A E +M R P+ +Y+ +L G+
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++++EM P+ +++ I+++ C EA +F M +P+ + +
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG +++EA + F +G P+ +YN ++ YC S R++ A ++ +M
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT TY+ ++ L GR +A +FK+M G PT+ TY I++ C + +D A
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSS-GMLPTLMTYSILLNGLCKHGHLDEA 602
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++ MK + + P + +Y+ LI + KL+ A F ++ GI+PPG+ ++ + +
Sbjct: 603 LKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKG 662
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L EG+ + A L +K ++ ++
Sbjct: 663 LLKEGLSDEAYELFRKWKMMKHNVII 688
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 172/353 (48%), Gaps = 36/353 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K ++ +N +ID+L K R V A + +M + PD+ +YT +L G
Sbjct: 294 MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ 353
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINA------------------------------- 89
L ++++M+ G +PDVV+Y +I++
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413
Query: 90 ----HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
C+ + DEA +LF+EM N P+ F L++GL E +SEA F ++G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
EP TYNA++ YC ++N+A ++ + M G P+ +Y+I+++ + R ++A
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ +MS K T P TY +++ CY ++ A ++ +M + G+LP + YS L+N
Sbjct: 534 ALLTQMSVKKLT-PNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNG 592
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
LC LD+A K F+ M + + P L++ L + + G E A L K+
Sbjct: 593 LCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLS 645
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 158/297 (53%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N ++ LC + A +F +M++ PD+ +Y I+++ + + +
Sbjct: 263 GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDA 322
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM D G PDVV+Y +++ C + +EA+ LF++ME CKP + T+I+
Sbjct: 323 ADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDS 382
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ +++A++F + RG P A TY+ ++ +C ++++A ++ EM + PN
Sbjct: 383 LCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPN 442
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T T+ I++ L + G EA VF+ M+ K G EP + TY ++ +C +++ A +++
Sbjct: 443 TLTFSILVDGLCQEGMVSEARWVFETMTEK-GVEPNIYTYNALMNGYCLRCKMNEARKVF 501
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ M +G P +H Y+ LIN C+ ++D A +M + P ++ + + L
Sbjct: 502 EIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558
>gi|302141771|emb|CBI18974.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 148/237 (62%), Gaps = 2/237 (0%)
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
+A R DEAV + +EM+++ CKP+ I+ L++ G E R+ +A+ F ++ E +
Sbjct: 75 NAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVA 134
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
YNA++GA+C ++ +AYR+++EM GI PN+RT +I+L+ LI G T+EA+ VF+RM
Sbjct: 135 VYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRM 194
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ +P TY ++++MFC N +++MA+++W M+ + +P MH +S LIN LC +
Sbjct: 195 IKV--CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGN 252
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVDR 328
AC +EM++ GIRP F LKQ L EG E+ L +K++ L K PL D+
Sbjct: 253 ASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLLVKEPLCDQ 309
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 1/188 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L+ T +E A F M++ + D+ Y L+ + + L + V EM
Sbjct: 101 YSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMD 160
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+ + I++N+ S DEA +FR M C P + +I +L
Sbjct: 161 CKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLE 219
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL+ + + + F P T++ ++ C + A +++EM + GI P++ T+ +
Sbjct: 220 MALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLK 279
Query: 193 HHLIKAGR 200
LIK GR
Sbjct: 280 QLLIKEGR 287
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%), Gaps = 2/200 (1%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
V+ A + +M P Y++L+ +G + + + +M+ + E DV Y
Sbjct: 78 RVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYN 137
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
+I A C + A + EM+ +P+ ++N L S EA + F + K
Sbjct: 138 ALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV 197
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
+P+A TY ++ +C + ++ A ++ MR P+ T+ ++++ L K G +A
Sbjct: 198 C-DPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKA 256
Query: 205 YSVFKRMSRKPGTEPTVSTY 224
+ + M K G P+ T+
Sbjct: 257 CILLEEMIEK-GIRPSSVTF 275
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ ++ ++ +N LI CK ++ A V ++M + P+ ++ I+L +
Sbjct: 124 MERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGD 183
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V+R M +PD +Y +MI C + + A+++++ M PS H F
Sbjct: 184 TDEAFRVFRRMIK-VCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSV 242
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
LINGL + S+A + ++G P + T+
Sbjct: 243 LINGLCKKGNASKACILLEEMIEKGIRPSSVTF 275
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 186 RTYDIVLHHLIK----AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
R IV+ +++K AGR +EA + K M +PT Y ++V + +++ A+
Sbjct: 60 RVSPIVVENVLKRFENAGRVDEAVGIVKEMDSSV-CKPTSFIYSVLVHTYGIENRIEDAV 118
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +M+ + + +Y+ LI + C +KL +A + EM GIRP
Sbjct: 119 YTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRP 166
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 174/318 (54%), Gaps = 2/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G K + N L+D+L ++ + AQ VF+K+K R F P +++YTILL GW + KN
Sbjct: 298 MKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDR-FTPSLQTYTILLSGWCRLKN 356
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL V+ EM D GF PDVV++ +M+ K+ +A++LF M+A P+ +
Sbjct: 357 LLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTI 416
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I +K + EA+++F RG +P+A Y ++ + +++ Y ++ EMR+ G
Sbjct: 417 MIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERG 476
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ RTY+ ++ + ++A ++K+M + G +PT+ TY ++++ + +M
Sbjct: 477 CPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQS-GIKPTIHTYNMIMKSYFVTKNYEMG 535
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
IWDEM +G P + Y I L +D+ +ACKY +EML+ G++ P ++
Sbjct: 536 HEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAPKLDYNKFASD 595
Query: 301 LRDEGMEETAVVLAQKID 318
+ G LA+K++
Sbjct: 596 ISKTGNAVILEELARKMN 613
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 73/261 (27%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
K GF D +Y M+ ++++ V + EM GL + +
Sbjct: 230 KRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGE--------------KGLLTMETF 275
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
S A++ F ++K+R A + D M+K G + +
Sbjct: 276 SIAIKAFAEAKQR----------------------KKAVGIFDLMKKYGFKVGVDVINFL 313
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE----- 246
L L A +EA +VF+++ K P++ TY I++ +C + A R+W+E
Sbjct: 314 LDSLSTAKLGKEAQAVFEKL--KDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRG 371
Query: 247 ------------------------------MKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
MKA+G P + Y+ +I C + + +A
Sbjct: 372 FNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAI 431
Query: 277 KYFQEMLDIGIRPPGQLFSNL 297
+YF M+D G +P L++ L
Sbjct: 432 EYFDVMVDRGCQPDAALYTCL 452
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 163/298 (54%), Gaps = 5/298 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD +N LID CK+ +E+ +E+FD+M K P++ + L+ G + + S
Sbjct: 417 PDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF 476
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ E + G + D V+Y +INA C+ +++A+ELF EM + C P ++ TLI+G
Sbjct: 477 FVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQ 536
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
R+++A + KK G P+ YN ++G +C + + + + M+ EM + G+ P+T T
Sbjct: 537 AGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTIT 596
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y+ ++ + K G + A V ++M K G PTV+TY V+ +C N + AM I+ +M
Sbjct: 597 YNTLIAYASKNGDLKFAQKVMRKMI-KAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDM 655
Query: 248 KARG-VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
KA V P +Y+ LINSLC +K+ A ++M G+ P ++ + + LRDE
Sbjct: 656 KAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDE 713
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 10/292 (3%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
RLI LC++R R ++F +M K + + LL G ++ N MNE+ +M +
Sbjct: 275 RLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEM 334
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREME--------ATNCKPSPHIFCTLINGLG 126
+P+VV++GI+IN C +R D+A+E+ +M + + +P I+ TLI+GL
Sbjct: 335 DIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLC 394
Query: 127 SEKRLSEALQFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R E L + + ++G P+ TYN ++ +C + I + DEM K G+ PN
Sbjct: 395 KVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNV 454
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T + ++ + + GR A + F R+ G + TY ++ FC + AM +++
Sbjct: 455 VTVNTLVGGMCRTGRVSSAVNFFVEAQRR-GMKGDAVTYTALINAFCNVNNFEKAMELFN 513
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
EM G P +Y TLI+ ++ DA E+ +GIRP ++ L
Sbjct: 514 EMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTL 565
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 152/335 (45%), Gaps = 14/335 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR--------FDPDIKSYTILL 52
M + ++ + F LI+ +CK R V+ A EV +KM + +PD+ Y L+
Sbjct: 331 MVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLI 390
Query: 53 EGW---GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
+G G+Q+ L + E R K G PD ++Y +I+ C A ++ ELF EM
Sbjct: 391 DGLCKVGRQQEGLGLMERMRSQK--GCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKE 448
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
P+ TL+ G+ R+S A+ FF ++++RG + +A TY A++ A+C A
Sbjct: 449 GVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKA 508
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ +EM K G P+ Y ++ +AGR +A V + +K G P Y ++
Sbjct: 509 MELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAEL-KKLGIRPDTVCYNTLIG 567
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
FC + + EM+ G+ P Y+TLI L A K ++M+ G+ P
Sbjct: 568 GFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVP 627
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ + A G A+ + + + K P
Sbjct: 628 TVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVP 662
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 1/203 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G++ + +N LI C++ R E+ +M++ PD +Y L+ + +
Sbjct: 550 LKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGD 609
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFC 119
L +V R+M G P V +YG +INA+C +EA+E+F++M+A + P+ I+
Sbjct: 610 LKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYN 669
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LIN L ++ A+ K G P TYNA+ + + MD M +
Sbjct: 670 ILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEH 729
Query: 180 GIGPNTRTYDIVLHHLIKAGRTE 202
P+ T +I+ L G E
Sbjct: 730 ACNPDYITMEILTEWLSAVGEIE 752
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 4/186 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GLK + +N LI K+ ++ AQ+V KM K P + +Y ++ + N
Sbjct: 585 MEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGN 644
Query: 61 LLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
E++++MK P+ V Y I+IN+ C + AV L +M+ P+ +
Sbjct: 645 GNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYN 704
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+ GL EK L + +F + + P+ T + W + + R+ + C
Sbjct: 705 AIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTE---WLSAVGEIERLKKFVAGC 761
Query: 180 GIGPNT 185
+ +T
Sbjct: 762 EVSSST 767
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 163/288 (56%), Gaps = 2/288 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G K + N L+D+L ++ + AQ VF+K+K R F P +++YTILL GW + KN
Sbjct: 160 MKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDR-FTPSLQTYTILLSGWCRLKN 218
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL V+ EM D GF PD+V++ +M+ K+ +A++LF M+A P+ +
Sbjct: 219 LLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTI 278
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I +K + EA+++F RG +P+A Y ++ + +++ Y ++ EMR+ G
Sbjct: 279 MIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERG 338
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ RTY+ ++ + ++A ++K+M + G +PT+ TY ++++ + +M
Sbjct: 339 CPPDGRTYNALIKLMTSQHMPDDAVRIYKKMI-QSGIKPTIHTYNMIMKSYFVTKNYEMG 397
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
IWDEM +G P + Y I L +D+ +ACKY +EML+ G++
Sbjct: 398 HEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMK 445
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 143/304 (47%), Gaps = 5/304 (1%)
Query: 16 LIDTLCKSRHVER-AQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
++D L + +H + A F KR F D ++Y ++ G+ + +M EM +
Sbjct: 69 VVDVLQRFKHARKPAFRFFCXAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGE 128
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G + ++ I I A AK+ + V +F M+ K + L++ L + K E
Sbjct: 129 KGL-LTMETFSIAIKAFAEAKQRKKEVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKE 187
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A F + K R F P TY ++ +C + +A R+ +EM G P+ ++++L
Sbjct: 188 AQAVFEKLKDR-FTPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLE 246
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+K + +A +F+ M K G P V +Y I+++ FC + A+ +D M RG
Sbjct: 247 GLLKCKKKSDAIKLFEIMKAK-GPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQ 305
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P +Y+ LI + K+D +EM + G P G+ ++ L + + + M + AV +
Sbjct: 306 PDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRI 365
Query: 314 AQKI 317
+K+
Sbjct: 366 YKKM 369
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 134/285 (47%), Gaps = 3/285 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N ++ L ++R E ++M ++ +++++I ++ + + K
Sbjct: 95 GFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGEKGL-LTMETFSIAIKAFAEAKQRKKE 153
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ MK GF+ V ++++ +AK EA +F +++ PS + L++G
Sbjct: 154 VGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLK-DRFTPSLQTYTILLSG 212
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K L EA + + + RGF P+ +N ++ + +DA ++ + M+ G PN
Sbjct: 213 WCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPN 272
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
R+Y I++ K EA F M + G +P + Y ++ F ++DM +
Sbjct: 273 VRSYTIMIQDFCKQKLMGEAIEYFDVMVDR-GCQPDAALYTCLITGFGRQKKMDMVYSLL 331
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM+ RG P Y+ LI + + DDA + +++M+ GI+P
Sbjct: 332 KEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKP 376
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I CK + + A E FD M R PD YT L+ G+G+QK + + + +EM+
Sbjct: 276 YTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMR 335
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G PD +Y +I S D+AV ++++M + KP+ H + ++ K
Sbjct: 336 ERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYE 395
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + + +G P+ +Y +G R +A + ++EM + G+ Y+
Sbjct: 396 MGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKALKLDYNKFA 455
Query: 193 HHLIKAG 199
+ K G
Sbjct: 456 SDISKTG 462
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 178/317 (56%), Gaps = 2/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+ K + N L+D+L +++ + AQ +F+ +K R F P++++YT+LL GW + KN
Sbjct: 189 MKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGR-FTPNLRTYTVLLNGWCKVKN 247
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V+ EM D GF+PD+V++ IM+ +K+ +A++LF M+A P +
Sbjct: 248 LMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTI 307
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + ++ EA+++F + G +P+A Y ++ + R++ Y ++ EM++ G
Sbjct: 308 LIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEG 367
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ + + ++A ++K+M+ + G EPT+ TY ++++ + +M
Sbjct: 368 CPPDGLTYNALIKLMTRLKMPDDAARIYKKMT-QSGIEPTIHTYNMIMKSYFQTRNYEMG 426
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+WDEM +G P + Y+ LI L + + +ACKY +EML+ G++ P ++
Sbjct: 427 RAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKFGAD 486
Query: 301 LRDEGMEETAVVLAQKI 317
L G + LAQ++
Sbjct: 487 LSRGGNPDILEELAQRL 503
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 134/290 (46%), Gaps = 3/290 (1%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
+K+ F+ D ++Y ++ + + ++ + EM G + ++ I + A +AK
Sbjct: 121 EKQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGV-LTMDTFSIAMRAFAAAKER 179
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+AV +F M+ N K L++ LG K EA F K R F P TY +
Sbjct: 180 KKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGR-FTPNLRTYTVL 238
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ +C + +A + +EM G P+ ++I+L L+++ + +A +F M K G
Sbjct: 239 LNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAK-G 297
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P V +Y I++R C ++++ A+ + EM G P +Y+ LI + ++D
Sbjct: 298 PSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVY 357
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+EM + G P G ++ L + + M + A + +K+ + P +
Sbjct: 358 DLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTI 407
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 93/233 (39%), Gaps = 70/233 (30%)
Query: 134 ALQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A +FF +K+GFE ++ TYN+++ + + M++EM G+ T+ I +
Sbjct: 112 AFRFFCWAGEKQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGV-LTMDTFSIAM 170
Query: 193 HHLIKAGRTEEAYSVFKRMSR---KPGTE------------------------------P 219
A ++A ++F+ M + K G E P
Sbjct: 171 RAFAAAKERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGRFTP 230
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDE--------------------------------- 246
+ TY +++ +C + A +W+E
Sbjct: 231 NLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLF 290
Query: 247 --MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
MKA+G P + Y+ LI LC + K+++A +YFQEM+D G +P +++ L
Sbjct: 291 MVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCL 343
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 169/320 (52%), Gaps = 3/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG++ + D ++L+ TLCK +HV AQ+ FDK+K F+P +K+Y+IL GWG +
Sbjct: 177 MGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSV-FNPSVKTYSILTRGWGVVGD 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ EM++ G DV++Y ++ A C + DEA ++F EM++ P +
Sbjct: 236 SNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSI 295
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I E L + ++K++ P TYN V+ C + +AY+++DEM + G
Sbjct: 296 FIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERG 355
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T +Y+ + + A ++ KRM R P TY +V+++ + D A
Sbjct: 356 VTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCV-PDKHTYNMVLKLLVRVGRFDRA 414
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W+ M RG P + Y+ +I+ C + KL++ACKYF+ M+D GI P L+
Sbjct: 415 NEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRD 474
Query: 300 ALRDEGMEETAVVLAQKIDK 319
L G ++ +L K+ +
Sbjct: 475 RLLGIGFKDQVAILGDKMKR 494
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 7/287 (2%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD--- 97
F+P SY I+++ G + + E+++ V+++ + + + R D
Sbjct: 111 FEPSDDSYHIVVDILGGSGQFAILWDFLIEIRET--RSSVITHELFWHVFTAYSRADLPQ 168
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+A+ F M + L+ L K ++ A QFF + K F P TY+ +
Sbjct: 169 DAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSV-FNPSVKTYSILT 227
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+ N+A ++ DEMR+ G + Y+ +L L K G+ +EAY +F M G
Sbjct: 228 RGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSN-GV 286
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P TY I +R C + R+ + K + +LP + Y+ +I LC + +++A +
Sbjct: 287 DPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQ 346
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM++ G+ P ++ ++ D +A+ L +++D+ + P
Sbjct: 347 ILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVP 393
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 169/320 (52%), Gaps = 3/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG++ + D ++L+ TLCK +HV AQ+ FDK+K F+P +K+Y+IL GWG +
Sbjct: 177 MGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSV-FNPSVKTYSILTRGWGVVGD 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ EM++ G DV++Y ++ A C + DEA ++F EM++ P +
Sbjct: 236 SNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSI 295
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I E L + ++K++ P TYN V+ C + +AY+++DEM + G
Sbjct: 296 FIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERG 355
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T +Y+ + + A ++ KRM R P TY +V+++ + D A
Sbjct: 356 VTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCV-PDKHTYNMVLKLLVRVGRFDRA 414
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W+ M RG P + Y+ +I+ C + KL++ACKYF+ M+D GI P L+
Sbjct: 415 NEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRD 474
Query: 300 ALRDEGMEETAVVLAQKIDK 319
L G ++ +L K+ +
Sbjct: 475 RLLGIGFKDQVAILGDKMKR 494
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 131/287 (45%), Gaps = 7/287 (2%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD--- 97
F+P SY I+++ G + + E+++ V+++ + + + R D
Sbjct: 111 FEPSDDSYHIVVDILGSSGQFAILWDFLIEIRET--RSSVITHELFWHVFTAYSRADLPQ 168
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+A+ F M + L+ L K ++ A QFF + K F P TY+ +
Sbjct: 169 DAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSV-FNPSVKTYSILT 227
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+ N+A ++ DEMR+ G + Y+ +L L K G+ +EAY +F M G
Sbjct: 228 RGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSN-GV 286
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P TY I +R C + R+ + K + +LP + Y+ +I LC + +++A +
Sbjct: 287 DPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQ 346
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM++ G+ P ++ ++ D +A+ L +++D+ + P
Sbjct: 347 ILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVP 393
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 164/317 (51%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + N LI+ LC+ HV A V KM K PD ++ L+ G +
Sbjct: 118 MDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGE 177
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G +PDV+SY +IN C + A++L R+ME CKP+ + T
Sbjct: 178 IKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTT 237
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L + +++A+ + RG P+ TY+ ++ +C +N+A + +EM
Sbjct: 238 IIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN 297
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT T+ I++ L K G EA VF+ M++K G EP TY ++ +C N Q+D A
Sbjct: 298 VMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKK-GAEPNAYTYNALMDGYCLNNQMDEA 356
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ D M +G PV+H Y+ LIN C +LD+A EM + + P +S L Q
Sbjct: 357 QKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQG 416
Query: 301 LRDEGMEETAVVLAQKI 317
L G + A+ L +++
Sbjct: 417 LCQVGRPQEALNLFKEM 433
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 170/317 (53%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ ++ +I+ LCKS + A ++ KM+++ P++ +YT +++ +
Sbjct: 188 MVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTL 247
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM D G PDVV+Y +++ CS +EA LF EM N P+ F
Sbjct: 248 VNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTI 307
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL E +SEA F K+G EP A TYNA++ YC + ++++A +++D M G
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P +Y+I+++ K R +EA S+ MS K T TV TY +++ C + A
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTV-TYSTLMQGLCQVGRPQEA 426
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ EM + G+LP + YSTL++ LC LD+A K + M + I P L++ L +
Sbjct: 427 LNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEG 486
Query: 301 LRDEGMEETAVVLAQKI 317
+ G E A L K+
Sbjct: 487 MFIAGKLEVAKELFSKL 503
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 1/271 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+D LCK V A+ VF+ M K+ +P+ +Y L++G+ + +V M
Sbjct: 305 FTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMV 364
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G P V SY I+IN +C +R DEA L EM P + TL+ GL R
Sbjct: 365 DKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQ 424
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL F + G P+ TY+ ++ C +++A +++ M++ I P+ Y+I++
Sbjct: 425 EALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILI 484
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ AG+ E A +F ++ G +PT+ TY I+++ D A ++ +M+ G
Sbjct: 485 EGMFIAGKLEVAKELFSKLFAD-GIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGF 543
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
LP Y+ +I A + EM+
Sbjct: 544 LPNSCSYNVIIQGFLQNQDSSTAIRLIDEMV 574
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 147/309 (47%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ ++ C H+ A +F++M R P+ ++TIL++G ++ +
Sbjct: 262 GIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEA 321
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G EP+ +Y +++ +C + DEA ++ M C P H + LING
Sbjct: 322 RCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILING 381
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+RL EA + ++ P+ TY+ ++ C R +A + EM G+ P+
Sbjct: 382 YCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPD 441
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L L K G +EA + K M ++ EP + Y I++ ++++A ++
Sbjct: 442 LMTYSTLLDGLCKHGHLDEALKLLKSM-QESKIEPDIVLYNILIEGMFIAGKLEVAKELF 500
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++ A G+ P + Y+ +I L E D+A + F++M D G P ++ + Q
Sbjct: 501 SKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQN 560
Query: 305 GMEETAVVL 313
TA+ L
Sbjct: 561 QDSSTAIRL 569
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 1/250 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N L+D C + ++ AQ+V D M + P + SY IL+ G+ +++
Sbjct: 328 MTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRR 387
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM + PD V+Y ++ C R EA+ LF+EM ++ P + T
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL L EAL+ ++ EP+ YN ++ + ++ A + ++ G
Sbjct: 448 LLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADG 507
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P RTY I++ L+K G ++EAY +F++M G P +Y ++++ F N A
Sbjct: 508 IQPTIRTYTIMIKGLLKEGLSDEAYELFRKM-EDDGFLPNSCSYNVIIQGFLQNQDSSTA 566
Query: 241 MRIWDEMKAR 250
+R+ DEM +
Sbjct: 567 IRLIDEMVGK 576
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K+ PD ++ L+ LC+ + A +F +M PD+ +Y+ LL+G + +L
Sbjct: 401 KELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDE 460
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ + M++ EPD+V Y I+I A + + A ELF ++ A +P+ + +I
Sbjct: 461 ALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIK 520
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL E EA + F + + GF P + +YN ++ + + + A R++DEM
Sbjct: 521 GLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSA 580
Query: 184 NTRTYDIVL 192
++ T+ ++L
Sbjct: 581 DSSTFQMLL 589
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +L ++ L+D LCK H++ A ++ M++ + +PDI Y IL+EG L
Sbjct: 437 GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVA 496
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ ++ DG +P + +Y IMI DEA ELFR+ME P+ + +I G
Sbjct: 497 KELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQG 556
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ S A++ + + F ++ T+ ++
Sbjct: 557 FLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 167/317 (52%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD F + + N LI+ LC+ HV+ + V KM K PD ++ L+ G +
Sbjct: 119 MDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGK 178
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ EM G EP+V+SY +IN C AV++F++ME CKP+ + T
Sbjct: 179 IKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYST 238
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ +++A++F + +RG P TYN++V +C ++N+A R+ EM
Sbjct: 239 IIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT T+ I++ L K G EA VF+ M+ K G EP +STY ++ +C ++ A
Sbjct: 299 VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEK-GVEPDISTYNALMDGYCLQRLMNEA 357
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++ M +G P H Y+ LIN C ++D+A EM + P +S L Q
Sbjct: 358 KKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 417
Query: 301 LRDEGMEETAVVLAQKI 317
L G + A+ L +++
Sbjct: 418 LCQLGRPKEALNLFKEM 434
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 180/388 (46%), Gaps = 71/388 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + FN LI+ LC ++ A E+F++M KR +P++ SYT ++ G + N
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGN 213
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINA------------------------------- 89
+V+++M+ +G +P+VV+Y +I++
Sbjct: 214 TSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNS 273
Query: 90 ----HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
C+ + +EA LF+EM + P+ F L++GL E +SEA F ++G
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333
Query: 146 FEPEAPTYNAV-----------------------------------VGAYCWSMRINDAY 170
EP+ TYNA+ + YC S R+++A
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++ EM + P+T TY ++ L + GR +EA ++FK M G P + TY I++
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSY-GPHPNLVTYVILLDG 452
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
FC + +D A+++ MK + + P + Y+ LI + KL+ A + F ++ G RP
Sbjct: 453 FCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPD 512
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKID 318
+ ++ + + L EG+ + A L +K++
Sbjct: 513 IRTYTVMIKGLLKEGLSDEAYDLFRKME 540
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 141/309 (45%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N ++ C + A +F +M R P+ ++TIL++G ++ +
Sbjct: 263 GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEA 322
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M + G EPD+ +Y +++ +C + +EA ++F M C P H + LING
Sbjct: 323 RLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILING 382
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+R+ EA + + P+ TY+ ++ C R +A + EM G PN
Sbjct: 383 YCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPN 442
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+L K G +EA + K M K EP + Y I++ ++++A ++
Sbjct: 443 LVTYVILLDGFCKHGHLDEALKLLKSMKEKK-LEPNIVHYTILIEGMFIAGKLEVAKELF 501
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++ G P + Y+ +I L E D+A F++M D G P ++ + Q
Sbjct: 502 SKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQN 561
Query: 305 GMEETAVVL 313
TA+ L
Sbjct: 562 QDSSTAIRL 570
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 1/271 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+D LCK V A+ VF+ M ++ +PDI +Y L++G+ Q+ + +V+ M
Sbjct: 306 FTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMI 365
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P SY I+IN +C ++R DEA L EM P + TL+ GL R
Sbjct: 366 RKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPK 425
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL F + G P TY ++ +C +++A +++ M++ + PN Y I++
Sbjct: 426 EALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILI 485
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ AG+ E A +F ++ GT P + TY ++++ D A ++ +M+ G
Sbjct: 486 EGMFIAGKLEVAKELFSKLFGD-GTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 544
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
LP Y+ +I A + EM+
Sbjct: 545 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 575
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 1/233 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P VV +G + + K+Y V L +M+ + + LIN L + ++
Sbjct: 91 PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G+ K G P+A T+NA++ C +I +A + +EM K G PN +Y V++ L K
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G T A VFK+M + G +P V TY ++ C + V+ AM EM RG+ P +
Sbjct: 211 TGNTSMAVDVFKKMEQN-GCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
Y+++++ C+ +L++A + F+EM+ + P F+ L L EGM A
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEA 322
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 1/264 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
V+ A F +M + P + + L + ++K ++ + +M +V S I
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C D +V + +M P F LINGL +E ++ EA++ F + KRG
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
EP +Y V+ C + + A + +M + G PN TY ++ L K +A
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
M + G P V TY +V FC Q++ A R++ EM R V+P ++ L++
Sbjct: 254 EFLSEMVER-GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312
Query: 266 LCHEDKLDDACKYFQEMLDIGIRP 289
LC E + +A F+ M + G+ P
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEP 336
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 113/231 (48%), Gaps = 1/231 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N LI+ CKSR ++ A+ + +M + +PD +Y+ L++G Q +++EM
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G P++V+Y I+++ C DEA++L + M+ +P+ + LI G+ +L
Sbjct: 435 CSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKL 494
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A + F + G P+ TY ++ ++AY + +M G PN+ +Y+++
Sbjct: 495 EVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVM 554
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+ ++ + A + M K + +ST+++++ + + + MR
Sbjct: 555 IQGFLQNQDSSTAIRLIDEMVGKRFS-VNLSTFQMLLDLESQDEIISQFMR 604
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
L + ++ L+ LC+ + A +F +M P++ +Y ILL+G+ + +L
Sbjct: 403 ALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEA 462
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ + MK+ EP++V Y I+I A + + A ELF ++ +P + +I G
Sbjct: 463 LKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKG 522
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E EA F + + GF P + +YN ++ + + + A R++DEM N
Sbjct: 523 LLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVN 582
Query: 185 TRTYDIVL 192
T+ ++L
Sbjct: 583 LSTFQMLL 590
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 71/138 (51%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L+ + + LI+ + + +E A+E+F K+ PDI++YT++++G ++
Sbjct: 474 LEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAY 533
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+++R+M+DDGF P+ SY +MI + A+ L EM + F L++
Sbjct: 534 DLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDLE 593
Query: 126 GSEKRLSEALQFFGQSKK 143
++ +S+ ++ Q +K
Sbjct: 594 SQDEIISQFMRGSSQGRK 611
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Query: 147 EPEAPTYN-AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P P N V ++ ++DA M + P+ + L K +
Sbjct: 54 KPSLPKNNDGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVV 113
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
S+ +M T V + I++ C VD ++ + +M G+ P ++ LIN
Sbjct: 114 SLCNQMDLFRVTH-NVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALING 172
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
LC+E K+ +A + F EM+ G P ++ + L G AV + +K+++
Sbjct: 173 LCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQ 226
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
++A + F RM R P+V + + F Q + + ++M V ++ +
Sbjct: 74 VDDALASFYRMVR-INPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLN 132
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
LIN LC + +D + +M +GI P F+ L L +EG + AV L ++ K
Sbjct: 133 ILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKR 192
Query: 321 RKTPLV 326
P V
Sbjct: 193 GHEPNV 198
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 162/293 (55%), Gaps = 2/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID CK+ +E A+E+FD+M K P++ + L++G + + E + EM+
Sbjct: 419 YNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQ 478
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + + V+Y +I A C+ ++A+ELF EM C P ++ TLI+GL +L
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD 538
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + K+ GF P+ ++N ++ +C ++++AY M+ EM GI P+ TY+ ++
Sbjct: 539 RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG- 251
H K G A+ + K+M K G PTV TY ++ +C N +D AM+I+ +M +
Sbjct: 599 SHFSKTGDFSTAHRLMKKMV-KEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK 657
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
V P +Y+ LINSLC ++++D A +M G++P F+ + + L+++
Sbjct: 658 VPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEK 710
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 164/371 (44%), Gaps = 47/371 (12%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+ KF + P+ +LI LC+S +RA +V + K + S LL G+
Sbjct: 258 VSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGR 317
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-----CK 112
+ MN + EMK+ +P+VV++GI+IN C +R DEA+E+F +M +
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVE 377
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQ--SKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
P + TLI+GL R E L + S+ R P TYN ++ YC + I A
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCM-PNTVTYNCLIDGYCKASMIEAAR 436
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ D+M K G+ PN T + ++ + K GR A F M K G + TY ++R
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGK-GLKGNAVTYTALIRA 495
Query: 231 FCYNAQVDMAMRIWDEM-----------------------------------KARGVLPV 255
FC ++ AM ++DEM K G P
Sbjct: 496 FCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPD 555
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ ++ LIN C ++KLD+A + +EM + GI+P G ++ L G TA L +
Sbjct: 556 IVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615
Query: 316 KIDKLRKTPLV 326
K+ K P V
Sbjct: 616 KMVKEGLVPTV 626
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 161/332 (48%), Gaps = 11/332 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-----FDPDIKSYTILLEGW 55
M + ++ + F LI+ LCK R V+ A EVF+KM +PD+ +Y L++G
Sbjct: 331 MKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGL 390
Query: 56 ---GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
G+Q+ L + E R P+ V+Y +I+ +C A + A ELF +M
Sbjct: 391 CKVGRQEEGLGLVERMRSQPR--CMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVP 448
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ TL++G+ R++ A++FF + + +G + A TY A++ A+C I A +
Sbjct: 449 PNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMEL 508
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
DEM + G P+ Y ++ L +AG+ + A V +M ++ G P + ++ +++ FC
Sbjct: 509 FDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKM-KEAGFSPDIVSFNVLINGFC 567
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
++D A + EM+ G+ P Y+TLI+ A + ++M+ G+ P
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVV 627
Query: 293 LFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ L A G + A+ + + + K P
Sbjct: 628 TYGALIHAYCLNGNLDEAMKIFRDMSSTSKVP 659
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 1/207 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ FN LI+ C+ ++ A E+ +M+ PD +Y L+ + + +
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFC 119
+ + + ++M +G P VV+YG +I+A+C DEA+++FR+M +T+ P+ I+
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LIN L + ++ AL K +G +P T+NA+ ++ A+ +MD M +
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P+ T +I+ L G T + S
Sbjct: 727 ACNPDYITMEILTEWLSAVGETAKLKS 753
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 136/308 (44%), Gaps = 27/308 (8%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKM--KKRRFDPDIKSYTILLEGWGQQKNL-LSMNE---- 66
N LID L + V+ A + D+M K F P+ + I+ ++ + +++E
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255
Query: 67 -VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE-------MEATNCKPSPHIF 118
+ + + P+ + +I+ C + R D A ++ MEA +C
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCN------ 309
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L+ LG + + K+ +P T+ ++ C R+++A + ++M
Sbjct: 310 -ALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368
Query: 179 CG-----IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ P+ TY+ ++ L K GR EE + +RM +P P TY ++ +C
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCK 428
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+ ++ A ++D+M GV P + +TL++ +C +++ A ++F EM G++
Sbjct: 429 ASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVT 488
Query: 294 FSNLKQAL 301
++ L +A
Sbjct: 489 YTALIRAF 496
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 160/311 (51%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + N LI+ LC+ HV+ A + KM K P ++ L+ G +
Sbjct: 114 MDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGK 173
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ EM G EP+V+SY +IN C AV++F++ME CKP + T
Sbjct: 174 IKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNT 233
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ +++A++F + RG P TYN +V +C ++N+A R+ EM
Sbjct: 234 IIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T T I++ L K G EA VF+ M+ K G EP +STY ++ +C ++ A
Sbjct: 294 VMPDTVTLTILVDGLCKEGMVSEARLVFETMTEK-GVEPNISTYNALMDGYCLQRLMNEA 352
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++ M +G P +H Y+ LIN C ++D+A EM + P +S L Q
Sbjct: 353 KKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQG 412
Query: 301 LRDEGMEETAV 311
L G + A+
Sbjct: 413 LCQFGRPKEAL 423
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 165/318 (51%), Gaps = 1/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K ++ +N +ID+LCK R V A E +M R P++ +Y ++ G+
Sbjct: 219 MEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQ 278
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++EM PD V+ I+++ C EA +F M +P+ +
Sbjct: 279 LNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNA 338
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ ++EA + F ++G P +YN ++ +C S R+++A ++ EM
Sbjct: 339 LMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T TY ++ L + GR +EA ++FK M G P + TY I++ FC + +D A
Sbjct: 399 LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSY-GLLPNLVTYSILLDGFCKHGHLDEA 457
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M+ + + P + ++ LI + KL+ A + F ++ GIRP + ++ + +
Sbjct: 458 LKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKG 517
Query: 301 LRDEGMEETAVVLAQKID 318
L EG+ + A L +K++
Sbjct: 518 LLKEGLSDEAYDLFRKME 535
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 1/268 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+D LCK V A+ VF+ M ++ +P+I +Y L++G+ Q+ + +V+ M G
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P V SY I+IN C ++R DEA L EM P + TL+ GL R EAL
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + G P TY+ ++ +C +++A +++ M++ + PN + I++ +
Sbjct: 424 NIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGM 483
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
AG+ E A +F ++ G PT+ TY ++++ D A ++ +M+ G LP
Sbjct: 484 FIAGKLEVAKELFSKLF-ADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 542
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEML 283
Y+ +I A + EM+
Sbjct: 543 SCSYNVMIQGFLQNQDSSTAIRLIDEMV 570
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 1/264 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F +M + P + + L + ++K ++ + +M G +V S +
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C D AV + +M P+ F LINGL +E ++ EA++ F + +RG
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
EP +YN ++ C + + A + +M + G P+ TY+ ++ L K +A
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
M + G P V TY +V FC Q++ A R++ EM R V+P + L++
Sbjct: 249 EFLSEMLDR-GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307
Query: 266 LCHEDKLDDACKYFQEMLDIGIRP 289
LC E + +A F+ M + G+ P
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEP 331
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 120/245 (48%), Gaps = 7/245 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG---WGQ 57
M + G + +N LI+ CKSR ++ A+ + +M + +PD +Y+ L++G +G+
Sbjct: 359 MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGR 418
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K L+ +++EM G P++V+Y I+++ C DEA++L + M+ +P+
Sbjct: 419 PKEALN---IFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVH 475
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
LI G+ +L A + F + G P TY ++ ++AY + +M
Sbjct: 476 HTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKME 535
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G PN+ +Y++++ ++ + A + M K + +ST+++++ + + +
Sbjct: 536 DDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFS-ANLSTFQMLLDLESQDEII 594
Query: 238 DMAMR 242
MR
Sbjct: 595 SQFMR 599
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 35/178 (19%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----- 55
M +GL L ++ L+D CK H++ A ++ M++++ +P+I +TIL+EG
Sbjct: 429 MCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGK 488
Query: 56 ----------------------------GQQKNLLS--MNEVYREMKDDGFEPDVVSYGI 85
G K LS +++R+M+DDGF P+ SY +
Sbjct: 489 LEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 548
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
MI + A+ L EM + F L++ ++ +S+ ++ Q +K
Sbjct: 549 MIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLDLESQDEIISQFMRGSSQGRK 606
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 2/174 (1%)
Query: 147 EPEAPTYNA-VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P P N V ++ I+DA M + P+ + L K +
Sbjct: 49 KPSLPQNNGGFVSNNSTNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVV 108
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
S+ +M G V + +++ C VD A+ I +M G+ P ++ LIN
Sbjct: 109 SLCNQMDLF-GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALING 167
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
LC+E K+ +A + F EM+ G P ++ + L G AV + +K+++
Sbjct: 168 LCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQ 221
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
++A + F RM R P+V+ + + F Q + + ++M GV ++ +
Sbjct: 70 DDALASFYRMVRM-NPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
LIN LC + +D A +M +GI P F+ L L +EG + AV L ++ +
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 322 KTPLV 326
P V
Sbjct: 189 HEPNV 193
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 180/312 (57%), Gaps = 8/312 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+GL+ + F L+D LCK+ V+ A +VF+ M+++ F P+++ +T LL GW ++
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGK 251
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ EV +MK+ G EPD+V + +++ + A + +A +L +M +P+ + +
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 121 LINGLG-SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC-WSMRINDAYRMMDEMRK 178
LI L +EKR+ EA++ F + ++ G E + TY A++ +C W M I+ Y ++D+MRK
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM-IDKGYSVLDDMRK 370
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P+ TY ++ K + EE + ++M R+ G P + Y +V+R+ C +V
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR-GCHPDLLIYNVVIRLACKLGEVK 429
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP---GQLFS 295
A+R+W+EM+A G+ P + + +IN + L +AC +F+EM+ GI G L S
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKS 489
Query: 296 NLKQALRDEGME 307
L +RD+ +E
Sbjct: 490 LLNNLVRDDKLE 501
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 153/324 (47%), Gaps = 4/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ-QK 59
M + GL+ ++ F L+ + + A ++ + M+KR F+P++ YT+L++ + +K
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ V+ EM+ G E D+V+Y +I+ C D+ + +M PS +
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
++ +++ E L+ + K+RG P+ YN V+ C + +A R+ +EM
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P T+ I+++ G EA + FK M SR + P T + ++ + +++
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Query: 239 MAMRIWDEM--KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
MA +W + K + ++ I++L + + +AC Y +M+++ + P ++
Sbjct: 502 MAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 297 LKQALRDEGMEETAVVLAQKIDKL 320
L + L A + +K+ K+
Sbjct: 562 LMKGLNKLYNRTIAAEITEKVVKM 585
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 8/316 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR---FDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L K R + ++M+K +P++ + +L+ + + EV EM
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTNPELIEPEL--FVVLMRRFASANMVKKAVEVLDEMP 194
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD +G +++A C EA ++F +M P+ F +L+ G E +L
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLM 253
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + Q K+ G EP+ + ++ Y + ++ DAY +M++MRK G PN Y +++
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 193 HHLIKA-GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L + R +EA VF M R G E + TY ++ FC +D + D+M+ +G
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERY-GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG 372
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
V+P Y ++ + +++ ++ + ++M G P +++ + + G + AV
Sbjct: 373 VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAV 432
Query: 312 VLAQKIDKLRKTPLVD 327
L +++ +P VD
Sbjct: 433 RLWNEMEANGLSPGVD 448
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 180/312 (57%), Gaps = 8/312 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+GL+ + F L+D LCK+ V+ A +VF+ M+++ F P+++ +T LL GW ++
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGK 251
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ EV +MK+ G EPD+V + +++ + A + +A +L +M +P+ + +
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 121 LINGL-GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC-WSMRINDAYRMMDEMRK 178
LI L +EKR+ EA++ F + ++ G E + TY A++ +C W M I+ Y ++D+MRK
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM-IDKGYSVLDDMRK 370
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P+ TY ++ K + EE + ++M R+ G P + Y +V+R+ C +V
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR-GCHPDLLIYNVVIRLACKLGEVK 429
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP---GQLFS 295
A+R+W+EM+A G+ P + + +IN + L +AC +F+EM+ GI G L S
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKS 489
Query: 296 NLKQALRDEGME 307
L +RD+ +E
Sbjct: 490 LLNNLVRDDKLE 501
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 150/316 (47%), Gaps = 8/316 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR---FDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L K R + ++M+K +P++ + +L+ + + EV EM
Sbjct: 137 MVMILSKMRQFGAVWGLIEEMRKTNPELIEPEL--FVVLMRRFASANMVKKAVEVLDEMP 194
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD +G +++A C EA ++F +M P+ F +L+ G E +L
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLM 253
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + Q K+ G EP+ + ++ Y + ++ DAY +M++MRK G PN Y +++
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 193 HHLIKA-GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L + R +EA VF M R G E + TY ++ FC +D + D+M+ +G
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERY-GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG 372
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
V+P Y ++ + +++ ++ + ++M G P +++ + + G + AV
Sbjct: 373 VMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAV 432
Query: 312 VLAQKIDKLRKTPLVD 327
L +++ +P VD
Sbjct: 433 RLWNEMEANGLSPGVD 448
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 152/324 (46%), Gaps = 4/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ-QK 59
M + GL+ ++ F L+ + + A ++ + M+KR F+P++ YT+L++ + +K
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ V+ EM+ G E D+V+Y +I+ C D+ + +M PS +
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
++ +++ E L+ + K+RG P+ YN V+ C + +A R+ +EM
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P T+ I+++ G EA + FK M SR + P T + ++ + +++
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Query: 239 MAMRIWD--EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
MA +W K + ++ I++L + + +AC Y +M+++ + P ++
Sbjct: 502 MAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 297 LKQALRDEGMEETAVVLAQKIDKL 320
L + L A + +K+ K+
Sbjct: 562 LMKGLNKLYNRTIAAEITEKVVKM 585
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + +N LID CK ++ A + M + P++ SY +++ G ++ +
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ EM GF PD V+Y ++N +C + +A+ + EM PS +
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN + + L+ A++FF Q + RG P TY ++ + +N+AYR+++EM + G
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 419
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ +H R EEA V + M K G P V +Y ++ FC ++D A
Sbjct: 420 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK-GLAPDVVSYSTIISGFCRKGELDRA 478
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM +GV P YS+LI LC +L +AC QEMLD+G+ P ++ L A
Sbjct: 479 FQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINA 538
Query: 301 LRDEG 305
EG
Sbjct: 539 YCVEG 543
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ L +N +I+ LC+ ++ A E+ ++M + F PD +Y LL G+ ++ N
Sbjct: 275 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 334
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM +G P VV+Y +IN+ C A+ + A+E F +M +P+ + T
Sbjct: 335 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + L+EA + + + GF P TYNA + +C R+ +A ++ EM + G
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y ++ + G + A+ + + M K G P TY +++ C ++ A
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK-GVSPDAVTYSSLIQGLCEMRRLTEA 513
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ EM G+ P Y+TLIN+ C E L+ A EM+ G P +S L
Sbjct: 514 CDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING 573
Query: 301 LRDEG 305
L +
Sbjct: 574 LNKQA 578
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 159/334 (47%), Gaps = 38/334 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVER--AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
G + +N ++D + +SR + A+EV+ +M + R P++ +Y IL+ G+ L
Sbjct: 172 GFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQ 231
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ EM+ +G P+VV+Y +I+A+C R DEA L + M + +P+ + +I
Sbjct: 232 KGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVII 291
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW-------------------- 162
NGL E + EA + + +GF P+ TYN ++ YC
Sbjct: 292 NGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVS 351
Query: 163 ---------------SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
+ +N A D+MR G+ PN RTY ++ + G EAY +
Sbjct: 352 PSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
M+ + G P+V TY + C +++ A+ + EM +G+ P + YST+I+ C
Sbjct: 412 LNEMT-ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFC 470
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ +LD A + QEM++ G+ P +S+L Q L
Sbjct: 471 RKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 504
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 163/361 (45%), Gaps = 57/361 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + LI+++CK+R++ RA E FD+M+ R P+ ++YT L++G+ +Q
Sbjct: 345 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGL 404
Query: 61 LLSMNEVYR---EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP---- 113
L NE YR EM + GF P VV+Y I+ HC +R +EA+ + +EM P
Sbjct: 405 L---NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVS 461
Query: 114 -----------------------------SPH--IFCTLINGLGSEKRLSEALQFFGQSK 142
SP + +LI GL +RL+EA +
Sbjct: 462 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 521
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
G P+ TY ++ AYC +N A + DEM G P+ TY ++++ L K RT
Sbjct: 522 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR 581
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEI---------------VVRMFCYNAQVDMAMRIWDEM 247
EA + ++ + P+ TY+ +++ FC + A R+++ M
Sbjct: 582 EAKRLLFKLIYEESV-PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM 640
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
R P +Y+ +I+ C L A ++EM+ G P L +AL EGM
Sbjct: 641 VERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMN 700
Query: 308 E 308
E
Sbjct: 701 E 701
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 159/330 (48%), Gaps = 25/330 (7%)
Query: 6 LKQEL------PDFNRLIDTLCKSRHV-ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
L QEL P + + L S HV + VFD M +KSY+ L Q
Sbjct: 111 LAQELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLM--------VKSYS-HLNMIDQA 161
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDE--AVELFREMEATNCKPSPH 116
N +++ K GF P V+SY +++A ++ + A E++REM + P+ +
Sbjct: 162 VNTINL------AKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVY 215
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ LI G S L + L FG+ ++ G P TYN ++ AYC RI++A+ ++ M
Sbjct: 216 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 275
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ PN +Y+++++ L + G +EA+ + + M K G P TY ++ +C
Sbjct: 276 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK-GFTPDEVTYNTLLNGYCKEGN 334
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
A+ I EM GV P + Y+ LINS+C L+ A ++F +M G+RP + ++
Sbjct: 335 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394
Query: 297 LKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
L +G+ A + ++ + +P V
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSV 424
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 116/300 (38%), Gaps = 51/300 (17%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ ++ +I C+ ++RA ++ +M ++ PD +Y+ L++G + + L
Sbjct: 454 GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 513
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +EM D G PD +Y +INA+C ++A+ L EM P + LING
Sbjct: 514 CDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING 573
Query: 125 LGSEKRLSEA----------------------------LQF------------------- 137
L + R EA ++F
Sbjct: 574 LNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEA 633
Query: 138 ---FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
F +R +P YN ++ +C + A+ + EM G P+T T ++
Sbjct: 634 DRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKA 693
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K G EE V R +++V + ++ + + +M G+LP
Sbjct: 694 LFKEGMNEEMSEVIGDTLRSCRLNEA-ELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLP 752
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 63/154 (40%)
Query: 32 VFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHC 91
+D + + + + KS L++G+ + + + V+ M + +P Y ++I+ HC
Sbjct: 601 TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHC 660
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
+A L++EM + P TLI L E E + G + + EA
Sbjct: 661 RGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAE 720
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+V + ++ +M K G+ PN+
Sbjct: 721 LAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPNS 754
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 154/284 (54%), Gaps = 1/284 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ FN L++ CK ++ + VFD M K+ P+ +Y L++G+ K +
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ M G PD+ SY IMIN C K++DEA+ LF+EM N P + +LI+GL
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+S ALQ Q RG P TYN+++ A C +++ A ++ +++ GI PN
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNM 470
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY I++ L ++G+ E+A VF+ + K G V TY I+++ FC + A+ +
Sbjct: 471 YTYSILIKGLCQSGKLEDARKVFEGLLVK-GHNLNVDTYTIMIQGFCVEGLFNEALALLS 529
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M+ G +P Y +I SL +D+ D A K +EM+ G+RP
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 152/298 (51%), Gaps = 1/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LCK A ++ ++ P++ Y +++ + K + +++ EM
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMI 252
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDVV+Y +I+ C + ++A++LF +M N KP + F L+N + ++
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E F K+G +P TYN+++ YC +N A + + M + G+ P+ ++Y I++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K + +EA ++FK M RK P V TY ++ + ++ A+++ D+M RGV
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRK-NIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P + Y++++++LC ++D A ++ D GI+P +S L + L G E A
Sbjct: 432 PPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDA 489
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 162/325 (49%), Gaps = 9/325 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K L + N LI+ C+ + A VF K+ K + PD ++T L++G + +
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQA 174
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ GF D +SYG +I+ C A++L + ++ +P+ ++ T+I+
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ K ++EA F + +G P+ TY+A++ +C ++NDA + ++M I P+
Sbjct: 235 MCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPD 294
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I+++ K G+ +E +VF M K G +P TY ++ +C +V+ A I+
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMM-MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIF 353
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M GV P + YS +IN C K D+A F+EM I P +S+L L
Sbjct: 354 NTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKS 413
Query: 305 GMEETAVVLAQKIDKLRKTPLVDRG 329
G A+ Q +D++ DRG
Sbjct: 414 GRISYAL---QLVDQMH-----DRG 430
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 144/290 (49%), Gaps = 1/290 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ LI C + A ++F+KM PD+ ++ IL+ + + +
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G +P+ V+Y +++ +C K ++A +F M P + +ING
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K+ EA+ F + ++ P+ TY++++ S RI+ A +++D+M G+ P
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPT 434
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
RTY+ +L L K + ++A ++ ++ K G +P + TY I+++ C + +++ A +++
Sbjct: 435 IRTYNSILDALCKIHQVDKAIALLTKLKDK-GIQPNMYTYSILIKGLCQSGKLEDARKVF 493
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+ + +G + Y+ +I C E ++A +M D G P + +
Sbjct: 494 EGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 130/279 (46%), Gaps = 1/279 (0%)
Query: 19 TLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
T + V+ A +F+++ +R P + +L + K+ ++ + ++M+ G +P
Sbjct: 59 TFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 118
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
++V+ I+IN C A +F ++ P F TLI GL + ++ +A F
Sbjct: 119 NLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFH 178
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+ GF + +Y ++ C A ++ + + PN Y+ ++ + K
Sbjct: 179 DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV 238
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
EA+ +F M K G P V TY ++ FC +++ A+ ++++M + P ++
Sbjct: 239 KLVNEAFDLFSEMISK-GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYT 297
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++ L+N+ C + K+ + F M+ GI+P +++L
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSL 336
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 37/271 (13%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR------LS 132
+ +SY S D+AV LF + N P F ++ L K LS
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 133 EALQF-----------------------------FGQSKKRGFEPEAPTYNAVVGAYCWS 163
+ ++F F + K G+ P+ T+ ++ C
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+I A+ D++ G + +Y ++H L K G T A + +R+ +P V
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL-VQPNVVM 227
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y ++ C V+ A ++ EM ++G+ P + YS LI+ C KL+DA F +M+
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Query: 284 DIGIRPPGQLFSNLKQAL-RDEGMEETAVVL 313
I+P F+ L A +D M+E V
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/167 (17%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+Y++ + + ++DA + + + + P ++ +L L+K+ + ++M
Sbjct: 52 SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ G +P + I++ FC + A ++ ++ G +P ++TLI LC + +
Sbjct: 112 EFR-GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+ A + +++ +G + L L G A+ L Q++D
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + +N LID CK ++ A + M + P++ SY +++ G ++ +
Sbjct: 36 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 95
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ EM GF PD V+Y ++N +C + +A+ + EM PS +
Sbjct: 96 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 155
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN + + L+ A++FF Q + RG P TY ++ + +N+AYR+++EM + G
Sbjct: 156 LINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 215
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ +H R EEA V + M K G P V +Y ++ FC ++D A
Sbjct: 216 FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK-GLAPDVVSYSTIISGFCRKGELDRA 274
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM +GV P YS+LI LC +L +AC QEMLD+G+ P ++ L A
Sbjct: 275 FQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINA 334
Query: 301 LRDEG 305
EG
Sbjct: 335 YCVEG 339
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 151/304 (49%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ L +N +I+ LC+ ++ A E+ ++M + F PD +Y LL G+ ++ N
Sbjct: 71 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 130
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM +G P VV+Y +IN+ C A+ + A+E F +M +P+ + T
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + L+EA + + + GF P TYNA + +C R+ +A ++ EM + G
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y ++ + G + A+ + + M K G P TY +++ C ++ A
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK-GVSPDAVTYSSLIQGLCEMRRLTEA 309
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ EM G+ P Y+TLIN+ C E L+ A EM+ G P +S L
Sbjct: 310 CDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING 369
Query: 301 LRDE 304
L +
Sbjct: 370 LNKQ 373
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI C +++ F +M++ P++ +Y L++ + + + + + M
Sbjct: 13 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 72
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+++SY ++IN C EA E+ EM P + TL+NG E
Sbjct: 73 SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 132
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL + + G P TY A++ + C + +N A D+MR G+ PN RTY ++
Sbjct: 133 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 192
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G EAY + M+ + G P+V TY + C +++ A+ + EM +G+
Sbjct: 193 DGFSRQGLLNEAYRILNEMT-ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + YST+I+ C + +LD A + QEM++ G+ P +S+L Q L
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 169/375 (45%), Gaps = 58/375 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + LI+++CK+R++ RA E FD+M+ R P+ ++YT L++G+ +Q
Sbjct: 141 MVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGL 200
Query: 61 LLSMNEVYR---EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP---- 113
L NE YR EM + GF P VV+Y I+ HC +R +EA+ + +EM P
Sbjct: 201 L---NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVS 257
Query: 114 -----------------------------SPH--IFCTLINGLGSEKRLSEALQFFGQSK 142
SP + +LI GL +RL+EA +
Sbjct: 258 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 317
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
G P+ TY ++ AYC +N A + DEM G P+ TY ++++ L K RT
Sbjct: 318 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR 377
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEI---------------VVRMFCYNAQVDMAMRIWDEM 247
EA + ++ + P+ TY+ +++ FC + A R+++ M
Sbjct: 378 EAKRLLFKLIYEESV-PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM 436
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM- 306
R P +Y+ +I+ C L A ++EM+ G P L +AL EGM
Sbjct: 437 VERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMN 496
Query: 307 EETAVVLAQKIDKLR 321
EE + V+ + R
Sbjct: 497 EEMSEVIGDTLRSCR 511
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 1/215 (0%)
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
P+ + + LI G S L + L FG+ ++ G P TYN ++ AYC RI++A+
Sbjct: 7 SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 66
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
++ M G+ PN +Y+++++ L + G +EA+ + + M K G P TY ++ +
Sbjct: 67 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK-GFTPDEVTYNTLLNGY 125
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C A+ I EM GV P + Y+ LINS+C L+ A ++F +M G+RP
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 292 QLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+ ++ L +G+ A + ++ + +P V
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSV 220
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M + + PN TY+I++ G ++ F M R G P V TY ++ +C
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERN-GCLPNVVTYNTLIDAYCKMG 59
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
++D A + M ++G+ P + Y+ +IN LC E + +A + +EM G P ++
Sbjct: 60 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
L EG A+V+ ++ + +P V
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSV 150
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 178/312 (57%), Gaps = 8/312 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G + + F L+D LCK+ V+ A +VF+ M+++ P+++ +T LL GW ++
Sbjct: 196 MPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREK-IPPNLRYFTSLLYGWCREGK 254
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ EV +MK+ G EPD+V + +++ + A + +A +L +M +P+ + +
Sbjct: 255 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTV 314
Query: 121 LINGL-GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC-WSMRINDAYRMMDEMRK 178
LI L +EKR+ EA++ F + ++ G E + TY A++ +C W M I+ Y ++D+MRK
Sbjct: 315 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM-IDKGYSVLDDMRK 373
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P+ TY +L K + EE + ++M ++ G P + Y +V+R+ C +V
Sbjct: 374 KGVMPSQVTYMQILVAHEKKEQFEECLELIEKM-KQIGCHPDLLIYNVVIRLACNFREVK 432
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP---GQLFS 295
A+R+W+EM+A G+ P M+ +IN + L +AC +F+EM+ GI G L S
Sbjct: 433 EAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQYGTLKS 492
Query: 296 NLKQALRDEGME 307
L LRD+ +E
Sbjct: 493 LLNTLLRDDKLE 504
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 135/278 (48%), Gaps = 8/278 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR---FDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L K R + ++M+K +P++ + +L+ + + EV EM
Sbjct: 140 MVKILSKMRQFGAVWGLIEEMRKENPELIEPEL--FVVLIRRFASANMVKKAVEVLDEMP 197
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GFEPD +G +++A C +A ++F +M P+ F +L+ G E +L
Sbjct: 198 KYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMR-EKIPPNLRYFTSLLYGWCREGKLM 256
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + Q K+ G EP+ + ++ Y + ++ DAY ++++MRK G PN Y +++
Sbjct: 257 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLI 316
Query: 193 HHLIKA-GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L + R +EA VF M R G E + TY ++ FC +D + D+M+ +G
Sbjct: 317 QALCRTEKRMDEAMRVFVEMERY-GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKG 375
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
V+P Y ++ + +++ ++ + ++M IG P
Sbjct: 376 VMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHP 413
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 148/324 (45%), Gaps = 4/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ-QK 59
M + GL+ ++ F L+ + + A ++ + M+KR ++P+ YT+L++ + +K
Sbjct: 265 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTEK 324
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ V+ EM+ G E D+V+Y +I+ C D+ + +M PS +
Sbjct: 325 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 384
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
++ +++ E L+ + K+ G P+ YN V+ C + +A R+ +EM
Sbjct: 385 QILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEAN 444
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P + I+++ G EA S FK M SR + P T + ++ + +++
Sbjct: 445 GLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQYGTLKSLLNTLLRDDKLE 504
Query: 239 MAMRIWD--EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
MA +W K + ++ I++L + + +AC Y +M+++ + P +
Sbjct: 505 MAKDVWSCISNKTSSCELNVSAWTIWIHALFAKGHVKEACSYCLDMMEMDLMPQPNTYVK 564
Query: 297 LKQALRDEGMEETAVVLAQKIDKL 320
L + L A + +K+ K+
Sbjct: 565 LMKGLNKLYNRTIAAEITEKVMKM 588
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 118/288 (40%), Gaps = 35/288 (12%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N ID +CK H+ R + D T ++KN L + V+ E +
Sbjct: 24 NSRIDLICKRFHISRV-----------LNNDFVEST-------ERKNGLGL--VFPEKHE 63
Query: 74 DGFEPDVVS-YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D F DV Y I+ N H + + + + + P + +++ G L
Sbjct: 64 DEFAGDVEKIYRILRNYHSRVPKLELS------LNESGIDLRPGLIVRVLSRCGDAGNLG 117
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG---IGPNTRTYD 189
F +K+ G+ ++V + + +++EMRK I P +
Sbjct: 118 YRF-FLWATKQPGYCHSYEVCKSMVKILSKMRQFGAVWGLIEEMRKENPELIEPEL--FV 174
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ A ++A V M K G EP + ++ C N V A +++++M+
Sbjct: 175 VLIRRFASANMVKKAVEVLDEMP-KYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMRE 233
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ + P + +++L+ C E KL +A + +M + G+ P +F+NL
Sbjct: 234 K-IPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNL 280
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 164/317 (51%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + N LI+ LC+ HV+ A V KM K PD ++ L+ G +
Sbjct: 122 MDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGK 181
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G EP+V+SY +IN C AV +FR+ME KP+ + T
Sbjct: 182 IKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNT 241
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ ++EA++F + RG P+ TYN ++ +C ++N+A R+ EM
Sbjct: 242 IIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN 301
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T T++I++ L K G EA V + M+ K G EP TY ++ +C + Q+D A
Sbjct: 302 VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEK-GAEPNAYTYNALMDGYCLHNQMDEA 360
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M +G P + Y+ LIN C ++++A + EM + + P +S L Q
Sbjct: 361 IKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQG 420
Query: 301 LRDEGMEETAVVLAQKI 317
L G A+ L +++
Sbjct: 421 LCQVGRPREALNLFKEM 437
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 158/312 (50%), Gaps = 1/312 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + +N +ID+LCK R V A E +M R PD+ +Y +L G+ L
Sbjct: 233 KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATR 292
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++EM PD V++ I+++ C EA + M +P+ + + L++G
Sbjct: 293 LFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYC 352
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ EA++ G +G P +YN ++ YC S R+N+A R++ EM + + P+T
Sbjct: 353 LHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTV 412
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ L + GR EA ++FK M G P + Y I++ FC + +D A+++ E
Sbjct: 413 TYSTLMQGLCQVGRPREALNLFKEMC-SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKE 471
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M R + P + +Y+ LI + KL+ A + F ++ GIRP ++ + + L EG+
Sbjct: 472 MHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGL 531
Query: 307 EETAVVLAQKID 318
+ A +K++
Sbjct: 532 SDEAYEFFRKME 543
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 151/316 (47%), Gaps = 4/316 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N ++ C + A +F +M R PD ++ IL++G ++ +
Sbjct: 266 GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA 325
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V M + G EP+ +Y +++ +C + DEA+++ M C P+ + LING
Sbjct: 326 RCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILING 385
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
KR++EA + + ++ P+ TY+ ++ C R +A + EM G+ P+
Sbjct: 386 YCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPD 445
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y I+L K G +EA + K M + +P + Y I++R ++++A ++
Sbjct: 446 LMAYSILLDGFCKHGHLDEALKLLKEMHERR-IKPNIILYTILIRGMFIAGKLEVAKELF 504
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++ A G+ P + Y+ +I L E D+A ++F++M D G P ++ + Q
Sbjct: 505 SKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQN 564
Query: 305 GMEETAVVLAQKIDKL 320
TA+ Q ID++
Sbjct: 565 QDSSTAI---QLIDEM 577
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 4/277 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD FN L+D LCK V A+ V + M ++ +P+ +Y L++G+ + +
Sbjct: 303 MPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIK 362
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V M G P++ SY I+IN +C +KR +EA L EM N P + TL+ GL
Sbjct: 363 VLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLC 422
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R EAL F + G P+ Y+ ++ +C +++A +++ EM + I PN
Sbjct: 423 QVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNII 482
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y I++ + AG+ E A +F ++S G P + TY ++++ D A + +
Sbjct: 483 LYTILIRGMFIAGKLEVAKELFSKLS-ADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRK 541
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
M+ G LP Y+ +I A + EM+
Sbjct: 542 MEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMV 578
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 122/247 (49%), Gaps = 1/247 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P VV +G + + K+Y AV L +M+ + + LIN L + A+
Sbjct: 94 PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSV 153
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G+ K G +P+A T+N ++ C +I +A + +EM G PN +Y+ V++ L K
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G T A VF++M + G +P V TY ++ C + V+ A+ EM RG+ P +
Sbjct: 214 NGNTIMAVRVFRKMEQNRG-KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVV 272
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
Y+T+++ C +L++A + F+EM+ + P F+ L L EGM A +++ +
Sbjct: 273 TYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETM 332
Query: 318 DKLRKTP 324
+ P
Sbjct: 333 TEKGAEP 339
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 4/296 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F +M + P + + L ++K S + +M G +V S +
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C D AV + +M +P F TLINGL +E ++ EA+ F + G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
EP +YN V+ C + A R+ +M + PN TY+ ++ L K EA
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
M + G P V TY ++ FC Q++ A R++ EM R V+P ++ L++
Sbjct: 257 EFLSEMVDR-GIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA--LRDEGMEETAVVLAQKIDK 319
LC E + +A + M + G P ++ L L ++ M+E VL I K
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQ-MDEAIKVLGIMIGK 370
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 2/181 (1%)
Query: 147 EPEAPTYNAVVGAYCWS-MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P P + G+ + + I+DA M + P+ + L + K + A
Sbjct: 57 KPSLPQKHCGFGSNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAV 116
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
S+ +M G V + +++ C + VD A+ + +M G+ P ++TLIN
Sbjct: 117 SLCNQMDLF-GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLING 175
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 325
LC+E K+ +A F EM+ G P ++ + L G AV + +K+++ R P
Sbjct: 176 LCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPN 235
Query: 326 V 326
V
Sbjct: 236 V 236
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 159/296 (53%), Gaps = 1/296 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N +ID +CK +E A +F++MK R PD +Y +++G+G+ L
Sbjct: 128 GSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDT 187
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EMK EPDV++Y +IN C + + +E FREM+ + KP+ + TL++
Sbjct: 188 VYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDA 247
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + +AL+F+ ++ G P TY ++V AYC ++DA+R+ DEM + G+ N
Sbjct: 248 FCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWN 307
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L R +EA +F +M G P +++Y ++ F +D A+ +
Sbjct: 308 VVTYTALIDGLCDVERIKEAEELFGKMV-TAGVIPNLASYTALIHGFVKAKNMDRALELL 366
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
DEMK RG+ P + +Y T I SLC +K++ A EM + GI+ +++ L A
Sbjct: 367 DEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDA 422
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L L + E A + F KMK+ R P +S LL + + M +++M
Sbjct: 66 FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI 125
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P V +Y IMI+ C + A LF EM+ P + ++I+G G RL
Sbjct: 126 GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + FF + K EP+ TYN ++ +C ++ EM++ G+ PN +Y ++
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLV 245
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K ++A + M R+ G P TY +V +C + A R+ DEM GV
Sbjct: 246 DAFCKEDMMQQALKFYVDM-RRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGV 304
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+ LI+ LC +++ +A + F +M+ G+ P
Sbjct: 305 EWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIP 341
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 150/321 (46%), Gaps = 2/321 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + ++ L+D CK +++A + + M++ P+ +YT L++ + + N
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGN 288
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM G E +VV+Y +I+ C +R EA ELF +M P+ +
Sbjct: 289 LSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTA 348
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G K + AL+ + K RG +P+ Y + + C +I A +M+EM++ G
Sbjct: 349 LIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKG 408
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I NT Y ++ K+ + E T T+ +++ C N V A
Sbjct: 409 IKANTFIYTTLMDAYFKS-ENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKA 467
Query: 241 MRIWDEMKAR-GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+ + + G+ +Y+ +I+ LC ED+++ A F++M G+ P +++L
Sbjct: 468 IDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLID 527
Query: 300 ALRDEGMEETAVVLAQKIDKL 320
+G A+ L K+ ++
Sbjct: 528 GKLKQGNVVQALALRDKMAEI 548
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 140/299 (46%), Gaps = 1/299 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + L+D CK ++ A + D+M + + ++ +YT L++G +
Sbjct: 264 MRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVER 323
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ +M G P++ SY +I+ AK D A+EL EM+ KP ++ T
Sbjct: 324 IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGT 383
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I L +++ A + +++G + Y ++ AY S ++ +++EM +
Sbjct: 384 FIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELD 443
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I T+ +++ L K +A F R+S G + + Y ++ C QV+ A
Sbjct: 444 IEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAA 503
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
++++M +G++P Y++LI+ + + A +M +IG+ G F +L Q
Sbjct: 504 TTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVE-SGARFGDLCQ 561
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 126/303 (41%), Gaps = 54/303 (17%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN------------------CK 112
M +GF+ + SY I+ + A+ Y +A + REM + C
Sbjct: 1 MNRNGFKHTIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCV 60
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKK----------------------------- 143
P +F L + L E EALQ F + K+
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 144 ------RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G +P TYN ++ C I A + +EM+ G+ P+T TY+ ++ K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGK 180
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
GR ++ F+ M + EP V TY ++ FC ++ + + EMK G+ P +
Sbjct: 181 VGRLDDTVYFFEEM-KSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVV 239
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
YSTL+++ C ED + A K++ +M +G+ P +++L A G A LA ++
Sbjct: 240 SYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEM 299
Query: 318 DKL 320
++
Sbjct: 300 SQV 302
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 168/324 (51%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+D+ + ++ +N ++ TLC S ++ A EV D+ +R PD+ +YTIL+E ++
Sbjct: 203 LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESG 262
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+D G +PDVV+Y ++IN C R DEA+ M + C+P+
Sbjct: 263 VGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNI 322
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + S R +A +F + ++G P T+N ++ C I A ++++M + G
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG 382
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ +Y+ +LH L K + E A M + G P + TY ++ C + +VD+A
Sbjct: 383 CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR-GCYPDIVTYNTLLTALCKDGKVDVA 441
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I +++ ++G PV+ Y+T+I+ L K DDA K EM G++P +S L
Sbjct: 442 VEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGG 501
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG + A+ ++++ P
Sbjct: 502 LSREGKVDEAIAFFHDLEEMGVKP 525
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 148/345 (42%), Gaps = 33/345 (9%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N + L ++ +E + + M R PDI + T L+ G + V ++D
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT------------------------ 109
G PDV++Y ++I+ +C A++L M +
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAME 233
Query: 110 --------NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
C P + LI E + +A++ + + +G +P+ TYN ++ C
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
R+++A R ++ M G PN T++I+L + GR +A M RK G P+V
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK-GCSPSV 352
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
T+ I++ C + A+ + ++M G P Y+ L+++LC + K++ A +Y
Sbjct: 353 VTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDI 412
Query: 282 MLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
M+ G P ++ L AL +G + AV + ++ +P++
Sbjct: 413 MVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVL 457
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 126/253 (49%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI+ LC+ + RA +V +KM + P+ SY LL + K
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E M G PD+V+Y ++ A C + D AVE+ ++ + C P + T
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + +A++ + K +G +P+ TY+ +VG ++++A ++ + G
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG 522
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ ++ L KA +T A M + G +PT ++Y I++ Y A
Sbjct: 523 VKPNAITYNSIMLGLCKARQTVRAIDFLAYMVAR-GCKPTETSYMILIEGLAYEGLAKEA 581
Query: 241 MRIWDEMKARGVL 253
+ + +E+ +RGV+
Sbjct: 582 LELLNELCSRGVV 594
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 133/287 (46%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + + N ++ ++C + A++ +M ++ P + ++ IL+ ++
Sbjct: 308 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGL 367
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V +M G P+ +SY +++A C K+ + A+E M + C P + T
Sbjct: 368 IGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNT 427
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L + ++ A++ Q +G P TYN V+ + +DA +++DEM+ G
Sbjct: 428 LLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKG 487
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ L + G+ +EA + F + + G +P TY ++ C Q A
Sbjct: 488 LKPDIITYSTLVGGLSREGKVDEAIAFFHDL-EEMGVKPNAITYNSIMLGLCKARQTVRA 546
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ M ARG P Y LI L +E +A + E+ G+
Sbjct: 547 IDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGV 593
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 88/188 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N L+ LCK V+ A E+ +++ + P + +Y +++G +
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMK G +PD+++Y ++ + DEA+ F ++E KP+ + +++ G
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLG 536
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ A+ F RG +P +Y ++ + +A +++E+ G+
Sbjct: 537 LCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKK 596
Query: 185 TRTYDIVL 192
+ +V+
Sbjct: 597 SSAEQVVV 604
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 169/305 (55%), Gaps = 2/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N L+D+L +++ + AQ +F K++ R F P++++YT+LL GW + KNL+ ++ EM
Sbjct: 212 INALLDSLGRAKLGKEAQALFGKLEGR-FTPNLRTYTVLLNGWCRVKNLMEAGRIWNEML 270
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D+GF+PD+V++ IM+ +K+ +A++ F M+A P + LI L + ++
Sbjct: 271 DEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMK 330
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ +F + G P+A Y ++ Y R++ Y ++ EM++ G P+ +TY+ ++
Sbjct: 331 EAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALI 390
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ ++A ++K+M + G EP++ +Y ++++ + +M +WDEM +G
Sbjct: 391 KLMTSQRMPDDAVRIYKKMIQN-GIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGF 449
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ I L + + ++ACKY +EM++ G++ P ++ G +
Sbjct: 450 CPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEE 509
Query: 313 LAQKI 317
LAQK+
Sbjct: 510 LAQKM 514
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ N +++ L +S+ A + F+ MK + PD++SYTIL+ +Q +
Sbjct: 273 GFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEA 332
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM D G PD Y ++ + + KR D EL +EM+ C P + LI
Sbjct: 333 VGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKL 392
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ S++ +A++ + + + G EP +YN ++ +Y + + DEM K G P+
Sbjct: 393 MTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPD 452
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y + + LI GR+EEA + M K P + Y F + D+ +
Sbjct: 453 DNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLD-YNKFAADFSRAGKPDILEELA 511
Query: 245 DEMKARGVLPVMHMYS 260
+MK G V ++++
Sbjct: 512 QKMKFSGKFEVSNVFA 527
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 162/320 (50%), Gaps = 3/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FG+K + D ++L+ LCK +HV++AQE FDK+ P+ K+Y+IL+ GWG +
Sbjct: 149 MGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVM-PNAKTYSILMRGWGDVGD 207
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ EM++ G DVV+Y ++ A C DEA +LFREM + P +
Sbjct: 208 SSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSI 267
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I + A Q + ++ P TYN +V C S ++++AY+++DEM + G
Sbjct: 268 FIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERG 327
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y+ + +A + RM K P TY +V++M + D
Sbjct: 328 VSPDLWSYNAIQAFHCDHCEVNKALRLISRM-EKENCMPDRHTYNMVLKMLLRVGRFDRV 386
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLC-HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W M+ RG P Y+ +++ C + KL++ACKYF+ M+D GI P L+
Sbjct: 387 TDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRN 446
Query: 300 ALRDEGMEETAVVLAQKIDK 319
+ G E VLA K+++
Sbjct: 447 RVIGLGFSEQIDVLAGKMER 466
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 147/289 (50%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G N +I LC+ +++A +VF +M+ R PD SY IL++G +
Sbjct: 141 MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGK 200
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++R M D G P V+Y ++I+ C A DEA+ELF+ M + C+PS F
Sbjct: 201 LNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ ++ EA + + G P+ TY+ ++ C R++DA ++++M K
Sbjct: 261 LIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P T + ++H L KAGR +EA V M G P V TY +V C Q + A
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV-SSGQSPDVVTYNTLVHGHCRAGQTERA 379
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +M ARG+ P + Y+ L++ LC ++L +AC F +M G P
Sbjct: 380 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 151/285 (52%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + LI LC + + A+E+F M +R P +Y ++++ ++ L
Sbjct: 40 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEA 99
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++M +DG PDVV+Y +++ C + R +EA+ LF EME C P+ T+I G
Sbjct: 100 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILG 159
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + ++ +A Q F + + R P++ +Y ++ + ++N+AY++ M GI P+
Sbjct: 160 LCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPS 219
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY++V+H + A +EA +FK M R G P+ T+ I++ C ++D A R+
Sbjct: 220 AVTYNVVIHGMCLAYTLDEALELFKSM-RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLL 278
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M G +P + YSTLI+ LC ++DDA ++M+ +P
Sbjct: 279 KRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 145/289 (50%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LID L K+ + A+++F K+ P +YT L+ G + E++ +M
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P V+Y ++I+A C +EA +L ++M P + T+++GL R+
Sbjct: 73 RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL F + ++ G P ++N ++ C +I+ A ++ EM I P++ +Y I++
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KAG+ EAY +F+RM G P+ TY +V+ C +D A+ ++ M+++G
Sbjct: 193 DGLAKAGKLNEAYKLFRRM-LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P ++ LI++ C K+D+A + + M D G P +S L L
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 150/310 (48%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G +N +ID CK +E A ++ KM + PD+ +Y +++G +
Sbjct: 71 MNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGR 130
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ G P+ S+ +I C + D+A ++F EMEA + P +
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGI 190
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL +L+EA + F + G P A TYN V+ C + +++A + MR G
Sbjct: 191 LIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++I++ K G+ +EA+ + KRM+ G P V TY ++ C A+VD A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT-DDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++M R P + +TLI+ LC ++ +A + M+ G P ++ L
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 301 LRDEGMEETA 310
G E A
Sbjct: 370 HCRAGQTERA 379
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 4/280 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ LI LC V+ A+ + + M KR+ P + + L+ G + + E
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 346
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V M G PDVV+Y +++ HC A + + A EL +M A P+ + L++GL
Sbjct: 347 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 406
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL EA F Q K G P TY A++ +C + +++ ++ EM GI P+
Sbjct: 407 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 466
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP-TVSTYEIVVRMFCYNAQVDMAMRIWD 245
Y + L K+GR+ A + + +E Y V +++MA+
Sbjct: 467 VYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVR 526
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+M G LP ++L+ LC + +A +E++D+
Sbjct: 527 DMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDL 566
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N L+ C++ ERA+E+ M R P++ +YT L+ G +
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V+ +MK G P++ +Y +I CSA + D ++LF EM P ++ T
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470
Query: 121 LINGLGSEKRLSEALQFF--GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L L R + AL+ G+ R Y V + ++ A + +M +
Sbjct: 471 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVR 530
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
G P ++ L K+G+ EA +V + +
Sbjct: 531 GGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 162/320 (50%), Gaps = 3/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FG+K + D ++L+ LCK +HV++AQE FDK+ P+ K+Y+IL+ GWG +
Sbjct: 176 MGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVM-PNAKTYSILMRGWGDVGD 234
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ EM++ G DVV+Y ++ A C DEA +LFREM + P +
Sbjct: 235 SSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSI 294
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I + A Q + ++ P TYN +V C S ++++AY+++DEM + G
Sbjct: 295 FIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERG 354
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y+ + +A + RM K P TY +V++M + D
Sbjct: 355 VSPDLWSYNAIQAFHCDHCEVNKALRLISRM-EKENCMPDRHTYNMVLKMLLRVGRFDRV 413
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLC-HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W M+ RG P Y+ +++ C + KL++ACKYF+ M+D GI P L+
Sbjct: 414 TDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRN 473
Query: 300 ALRDEGMEETAVVLAQKIDK 319
+ G E VLA K+++
Sbjct: 474 RVIGLGFSEQIDVLAGKMER 493
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 120/285 (42%), Gaps = 36/285 (12%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCTLINGLGSEKRLSE 133
GFE SY I+++ S+K++ + +M T C+ P IF + +
Sbjct: 109 GFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGD 168
Query: 134 ALQFFGQSKKRGFE----------------------------------PEAPTYNAVVGA 159
A++ F Q G + P A TY+ ++
Sbjct: 169 AIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRG 228
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+ ++A ++ +EMR+ G + Y+ +L L K G +EAY +F+ M G P
Sbjct: 229 WGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSN-GLAP 287
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
+Y I +R +C + A ++ D M+ ++P + Y+ ++ LC +K+D+A +
Sbjct: 288 DACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLL 347
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM++ G+ P ++ ++ D A+ L +++K P
Sbjct: 348 DEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMP 392
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 169/310 (54%), Gaps = 5/310 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G + + F L+D LCK+ V+ A +F+ M+ R F P +K +T LL GW ++
Sbjct: 217 MPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGK 275
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V ++++ GFEPD+V Y ++ + +A + +A +L +EM C+P+ F T
Sbjct: 276 LMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTT 335
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L ++K++ EA++ F + + G +A TY ++ +C +I+ Y ++D M + G
Sbjct: 336 LIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQG 395
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ K EE + + M RK G P ++ Y IV+R+ C ++
Sbjct: 396 HIPNPMTYLHIMAAHEKKEELEECIELMEEM-RKIGCTPDLNIYNIVIRLACKLGEIKEG 454
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP---GQLFSNL 297
+R+W+EM+A G+ P + + +I+ + L +AC++F+EM+ G+ G L L
Sbjct: 455 VRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELL 514
Query: 298 KQALRDEGME 307
LR E +E
Sbjct: 515 NSLLRAEKLE 524
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 134/280 (47%), Gaps = 7/280 (2%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS---YGIMINAHCSAKRYDEAVELFR 104
Y +++ G+ + ++ + EM+ + P VS + +++ SA+ +A+E+
Sbjct: 158 YKAMIKILGKMRQFGAVWALIEEMRREN--PQFVSPYVFVVLMRRFASARMVKKAIEVLD 215
Query: 105 EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
EM C+P H+F L++ L + EA F + R F P + +++ +C
Sbjct: 216 EMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREG 274
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ +A ++ ++R+ G P+ Y+ +L AG+ +AY + K M RK EP V ++
Sbjct: 275 KLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKE-CEPNVMSF 333
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ C +++ AMR++ EM++ G Y+TLI+ C K+ + M+
Sbjct: 334 TTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQ 393
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G P + ++ A + E + L +++ K+ TP
Sbjct: 394 QGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTP 433
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 169/310 (54%), Gaps = 5/310 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G + + F L+D LCK+ V+ A +F+ M+ R F P +K +T LL GW ++
Sbjct: 184 MPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGK 242
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V ++++ GFEPD+V Y ++ + +A + +A +L +EM C+P+ F T
Sbjct: 243 LMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTT 302
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L ++K++ EA++ F + + G +A TY ++ +C +I+ Y ++D M + G
Sbjct: 303 LIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQG 362
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ K EE + + M RK G P ++ Y IV+R+ C ++
Sbjct: 363 HIPNPMTYLHIMAAHEKKEELEECIELMEEM-RKIGCTPDLNIYNIVIRLACKLGEIKEG 421
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP---GQLFSNL 297
+R+W+EM+A G+ P + + +I+ + L +AC++F+EM+ G+ G L L
Sbjct: 422 VRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELL 481
Query: 298 KQALRDEGME 307
LR E +E
Sbjct: 482 NSLLRAEKLE 491
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 134/280 (47%), Gaps = 7/280 (2%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS---YGIMINAHCSAKRYDEAVELFR 104
Y +++ G+ + ++ + EM+ + P VS + +++ SA+ +A+E+
Sbjct: 125 YKAMIKILGKMRQFGAVWALIEEMRREN--PQFVSPYVFVVLMRRFASARMVKKAIEVLD 182
Query: 105 EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
EM C+P H+F L++ L + EA F + R F P + +++ +C
Sbjct: 183 EMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREG 241
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ +A ++ ++R+ G P+ Y+ +L AG+ +AY + K M RK EP V ++
Sbjct: 242 KLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKE-CEPNVMSF 300
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ C +++ AMR++ EM++ G Y+TLI+ C K+ + M+
Sbjct: 301 TTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQ 360
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G P + ++ A + E + L +++ K+ TP
Sbjct: 361 QGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTP 400
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 165/320 (51%), Gaps = 3/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FGL+ + D ++L+ LCK +HV+ AQ+ FD++K +F+ K+Y+IL+ GWG
Sbjct: 174 MAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVK-HKFEAKAKTYSILVRGWGDIGE 232
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ EM+ G DV++Y ++ A C DEA ++FRE+ + +P +
Sbjct: 233 AVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAI 292
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I + + K+ P TYN ++ C + ++ DAY+++ EM + G
Sbjct: 293 FIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERG 352
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y+ +L + + A + M K P +Y +++++ + D A
Sbjct: 353 VSPDAWSYNTILAYHCEHSEVNRATKLISIMV-KDNCLPDRHSYNMLLKLLVRVGRFDRA 411
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
IW+ M RG P + YS +I+ LC + KL++AC+YF+ M+D GI P L+
Sbjct: 412 TEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRN 471
Query: 300 ALRDEGMEETAVVLAQKIDK 319
L G+ + +LA K+++
Sbjct: 472 RLIGFGLLDHIEILACKMER 491
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 3/258 (1%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEA 99
F+ +SY IL+ G + + + EM++ FE + ++ ++ A +A
Sbjct: 108 FEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDA 167
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ F M +PS L+ L K + A QFF + K + FE +A TY+ +V
Sbjct: 168 IRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHK-FEAKAKTYSILVRG 226
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+ +A ++ DEMR G + Y+ +L L K G +EAY +F+ + G EP
Sbjct: 227 WGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSH-GVEP 285
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
+Y I +R +C + + D MK ++P + Y+ +I LC K++DA +
Sbjct: 286 DACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLL 345
Query: 280 QEMLDIGIRPPGQLFSNL 297
EM++ G+ P ++ +
Sbjct: 346 HEMMERGVSPDAWSYNTI 363
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 167/317 (52%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K+ + +N +ID LCK +E A+ +F +MK+ F PDI +Y L++G G+
Sbjct: 47 MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL 106
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ +MKD +PDV++Y +IN C +R +A E EM+A KP+ + T
Sbjct: 107 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 166
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I+ E L EA++FF ++ P TY +++ A C + + +A ++++E+ + G
Sbjct: 167 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 226
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I N TY +L L + GR +EA VF+ M G P TY +V F +++ A
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAM-LNAGVAPNQETYTALVHGFIKAKEMEYA 285
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I EMK + + P + +Y T++ LC+E +L++A E+ + GI +++ L A
Sbjct: 286 KDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDA 345
Query: 301 LRDEGMEETAVVLAQKI 317
G A+ L +++
Sbjct: 346 YFKSGQATEALTLLEEM 362
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 139/298 (46%), Gaps = 24/298 (8%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LID CK+ ++ A ++ +++ + ++ +YT LL+G ++ + EV+R M
Sbjct: 199 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 258
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+ +Y +++ AK + A ++ +EM+ KP ++ T++ GL +E RL
Sbjct: 259 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 318
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY---------------------- 170
EA G+ K+ G A Y ++ AY S + +A
Sbjct: 319 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVA 378
Query: 171 -RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
++ DEM G+ P+ Y ++ +K G +EA ++ RM + G E + Y ++
Sbjct: 379 KKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMI-EIGMELDLHAYTALIW 437
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
++ QV A + DEM +GVLP +Y LI K+D+A + EM G+
Sbjct: 438 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 126/272 (46%), Gaps = 24/272 (8%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + + L+D LC+ ++ A+EVF M P+ ++YT L+ G+ + K +
Sbjct: 226 GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYA 285
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +EMK+ +PD++ YG ++ C+ R +EA L E++ + + I+ TL++
Sbjct: 286 KDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDA 345
Query: 125 LGSEKRLSEAL-----------------------QFFGQSKKRGFEPEAPTYNAVVGAYC 161
+ +EAL + F + +G P+ Y A++
Sbjct: 346 YFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 405
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ +A + D M + G+ + Y ++ L +G+ ++A ++ M K G P
Sbjct: 406 KHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK-GVLPDE 464
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
Y +++ + +VD A+ + +EM RG++
Sbjct: 465 VVYMCLIKKYYALGKVDEALELQNEMAKRGMI 496
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+E + +M+ P S +++ R D + + F++M A K S + +I+
Sbjct: 6 SECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDY 65
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E L A F Q K+ GF P+ TYN+++ + +++ + ++M+ P+
Sbjct: 66 LCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPD 125
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ K R +A+ M + G +P V TY + FC + A++ +
Sbjct: 126 VITYNALINCFCKFERMPKAFEFLHEM-KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFF 184
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M+ + P Y++LI++ C L +A K +E+L GI+ ++ L L +E
Sbjct: 185 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 244
Query: 305 G 305
G
Sbjct: 245 G 245
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+EA E F +M P P L++ L R + +FF G + TYN +
Sbjct: 3 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 62
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ C + A + +M++ G P+ TY+ ++ K G +E +F++M +
Sbjct: 63 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM-KDAD 121
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+P V TY ++ FC ++ A EMKA G+ P + YST I++ C E L +A
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
K+F +M + + P +++L A G A+ L ++I
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 222
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 1/194 (0%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L EA + F + +K P+ + NA++ R + + + +M GI + TY+I
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ +L K G E A S+F +M ++ G P + TY ++ +D + I+++MK
Sbjct: 62 MIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P + Y+ LIN C +++ A ++ EM G++P +S A EGM + A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 311 VVLAQKIDKLRKTP 324
+ + ++ TP
Sbjct: 181 IKFFVDMRRVALTP 194
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 147/289 (50%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G N +I LC+ +++A +VF +M+ + PD SY IL++G +
Sbjct: 141 MERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGK 200
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++++ M D G P V+Y ++I+ C A DEA+ELF+ M + C+PS F
Sbjct: 201 LNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNI 260
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ +L EA + + G P+ TY+ ++ C R++DA ++++M K
Sbjct: 261 LIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 320
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P T + ++H L KAGR +EA V M G P V TY +V C Q + A
Sbjct: 321 CKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV-SSGQSPDVVTYNTLVHGHCRAGQTERA 379
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +M ARG+ P + Y+ L++ LC ++L +AC F +M G P
Sbjct: 380 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 428
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 151/285 (52%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + LI LC + + A+E+F M +R P +Y ++++ ++ L
Sbjct: 40 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 99
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++M +DG PDVV+Y +++ C + R +EA+ LF EME C P+ T+I G
Sbjct: 100 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 159
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + ++ +A Q F + + + P++ +Y ++ + ++N+AY++ M GI P+
Sbjct: 160 LCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPS 219
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY++V+H + A +EA +FK M R G P+ T+ I++ C ++D A R+
Sbjct: 220 AVTYNVVIHGMCLAYTLDEALELFKSM-RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLL 278
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M G +P + YSTLI+ LC ++DDA ++M+ +P
Sbjct: 279 KRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 323
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LID L K+ + A+ +F K+ P +YT L+ G + E++ +M
Sbjct: 13 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P V+Y +MI+A C +EA +L ++M P + T+++GL R+
Sbjct: 73 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL F + ++ G P ++N ++ C +I+ A ++ EM I P++ +Y I++
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KAG+ EAY +F+RM G P+ TY +V+ C +D A+ ++ M+++G
Sbjct: 193 DGLAKAGKLNEAYKLFQRM-LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P ++ LI++ C KLD+A + + M D G P +S L L
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 150/310 (48%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G +N +ID CK +E A ++ KM + PD+ +Y +++G +
Sbjct: 71 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 130
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ G P+ S+ +I C + D+A ++F EMEA + P +
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGI 190
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL +L+EA + F + G P A TYN V+ C + +++A + MR G
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++I++ K G+ +EA+ + KRM+ G P V TY ++ C A+VD A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT-DDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++M R P + +TLI+ LC ++ +A + M+ G P ++ L
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 369
Query: 301 LRDEGMEETA 310
G E A
Sbjct: 370 HCRAGQTERA 379
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 4/280 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ LI LC V+ A+ + + M KR+ P + + L+ G + + E
Sbjct: 287 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 346
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V M G PDVV+Y +++ HC A + + A EL +M A P+ + L++GL
Sbjct: 347 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 406
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL EA F Q K G P TY A++ +C + +++ ++ EM GI P+
Sbjct: 407 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 466
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP-TVSTYEIVVRMFCYNAQVDMAMRIWD 245
Y + L K+GR+ A + + +E Y V +++MA+
Sbjct: 467 VYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVR 526
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+M G LP ++L+ LC + +A +E++D+
Sbjct: 527 DMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDL 566
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N L+ C++ ERA+E+ M R P++ +YT L+ G +
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V+ +MK G P++ +Y +I CSA + D ++LF EM P ++ T
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470
Query: 121 LINGLGSEKRLSEALQFF--GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L L R + AL+ G+ R Y V + ++ A + +M +
Sbjct: 471 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVR 530
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
G P ++ L K+G+ EA +V + +
Sbjct: 531 GGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 167/317 (52%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K+ + +N +ID LCK +E A+ +F +MK+ F PDI +Y L++G G+
Sbjct: 246 MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL 305
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ +MKD +PDV++Y +IN C +R +A E EM+A KP+ + T
Sbjct: 306 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 365
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I+ E L EA++FF ++ P TY +++ A C + + +A ++++E+ + G
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I N TY +L L + GR +EA VF+ M G P TY +V F +++ A
Sbjct: 426 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAM-LNAGVAPNQETYTALVHGFIKAKEMEYA 484
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I EMK + + P + +Y T++ LC+E +L++A E+ + GI +++ L A
Sbjct: 485 KDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDA 544
Query: 301 LRDEGMEETAVVLAQKI 317
G A+ L +++
Sbjct: 545 YFKSGQATEALTLLEEM 561
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 150/298 (50%), Gaps = 1/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LID CK+ ++ A ++ +++ + ++ +YT LL+G ++ + EV+R M
Sbjct: 398 YTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAML 457
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+ +Y +++ AK + A ++ +EM+ KP ++ T++ GL +E RL
Sbjct: 458 NAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLE 517
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA G+ K+ G A Y ++ AY S + +A +++EM G+ TY ++
Sbjct: 518 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALI 577
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+G +EA F RMS + G +P V+ Y +V C N ++A +++DEM +G+
Sbjct: 578 DGLCKSGLVQEAMHHFGRMS-EIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGM 636
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+P Y+ LI+ L +A M++IG+ ++ L L G + A
Sbjct: 637 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKA 694
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + + L+D LC+ ++ A+EVF M P+ ++YT L+ G+ + K +
Sbjct: 425 GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYA 484
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI------- 117
++ +EMK+ +PD++ YG ++ C+ R +EA L E++ + + I
Sbjct: 485 KDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDA 544
Query: 118 ----------------------------FCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+C LI+GL + EA+ FG+ + G +P
Sbjct: 545 YFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPN 604
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
Y A+V C + A ++ DEM G+ P+ Y ++ +K G +EA ++
Sbjct: 605 VAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD 664
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
RM + G E + Y ++ ++ QV A + DEM +GVLP +Y LI
Sbjct: 665 RMI-EIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYAL 723
Query: 270 DKLDDACKYFQEMLDIGI 287
K+D+A + EM G+
Sbjct: 724 GKVDEALELQNEMAKRGM 741
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 132/296 (44%), Gaps = 3/296 (1%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
D N ++ L R V + +VFD + R P + L + L +E +
Sbjct: 150 DANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFL 209
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M+ P S +++ R D + + F++M A K S + +I+ L E
Sbjct: 210 KMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEG 269
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
L A F Q K+ GF P+ TYN+++ + +++ + ++M+ P+ TY+
Sbjct: 270 DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYN 329
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ K R +A+ M + G +P V TY + FC + A++ + +M+
Sbjct: 330 ALINCFCKFERMPKAFEFLHEM-KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 388
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ P Y++LI++ C L +A K +E+L GI+ ++ L L +EG
Sbjct: 389 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEG 444
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 19/268 (7%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN------------------CKPSPH 116
GF+ +Y I+++ A+ Y +A + +E+ C P
Sbjct: 127 GFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFG 186
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+F L + L L EA + F + +K P+ + NA++ R + + + +M
Sbjct: 187 VFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM 246
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
GI + TY+I++ +L K G E A S+F +M ++ G P + TY ++
Sbjct: 247 GAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNSLIDGHGKLGL 305
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+D + I+++MK P + Y+ LIN C +++ A ++ EM G++P +S
Sbjct: 306 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 365
Query: 297 LKQALRDEGMEETAVVLAQKIDKLRKTP 324
A EGM + A+ + ++ TP
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTP 393
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + + L+D LCK+ E A+++FD+M + PD +YT L++G + N
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 655
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + M + G E D+ +Y +I + + +A L EM P ++
Sbjct: 656 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 715
Query: 121 LINGLGSEKRLSEALQFFGQSKKRG 145
LI + ++ EAL+ + KRG
Sbjct: 716 LIKKYYALGKVDEALELQNEMAKRG 740
>gi|224139118|ref|XP_002326772.1| predicted protein [Populus trichocarpa]
gi|222834094|gb|EEE72571.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 166/319 (52%), Gaps = 6/319 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
KFG++ +FN L+ C R ++ A+ VF KM +R F P++K+ ILL G+ + +++
Sbjct: 181 KFGVE----EFNVLLRAFCTVRKLKEAKSVFVKMHER-FPPNVKTMNILLLGFKESRDVT 235
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+M Y EM GF+P SYGI I+A+C + +A+ +F EME NC P+ TLI
Sbjct: 236 AMELFYHEMVKRGFKPSSSSYGIRIDAYCKKGYFADALRIFEEMERANCLPTLETVTTLI 295
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G G + +A + F + KR + + YNA++ + + A ++MDEM K I
Sbjct: 296 HGAGVARNAMKARELFDEIPKRNLQADTGAYNALISSLVKCREVKSAIQLMDEMEKNNIH 355
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+ TY + L+K+G E ++ +M + P T ++++ FC N+Q+D+ +
Sbjct: 356 YDDMTYHTMFLGLMKSGSIEGVCELYHKMIDR-NFVPKTRTVVMLMKFFCVNSQIDLGLN 414
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+W + +G P H L+ LC + +A K ++ L+ GI ++ L++ L
Sbjct: 415 LWGYLVGKGYCPHHHALDLLVTGLCSRGRSHEAFKCSKQSLERGIHVSEAVYGMLERFLL 474
Query: 303 DEGMEETAVVLAQKIDKLR 321
M + L Q I+KL+
Sbjct: 475 QSNMTDKLGELNQMIEKLQ 493
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 1/238 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K + ID CK + A +F++M++ P +++ T L+ G G +N
Sbjct: 244 MVKRGFKPSSSSYGIRIDAYCKKGYFADALRIFEEMERANCLPTLETVTTLIHGAGVARN 303
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ E+ + D +Y +I++ + A++L EME N + T
Sbjct: 304 AMKARELFDEIPKRNLQADTGAYNALISSLVKCREVKSAIQLMDEMEKNNIHYDDMTYHT 363
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ GL + + + + R F P+ T ++ +C + +I+ + + G
Sbjct: 364 MFLGLMKSGSIEGVCELYHKMIDRNFVPKTRTVVMLMKFFCVNSQIDLGLNLWGYLVGKG 423
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
P+ D+++ L GR+ EA+ K+ S + G + + Y ++ R + D
Sbjct: 424 YCPHHHALDLLVTGLCSRGRSHEAFKCSKQ-SLERGIHVSEAVYGMLERFLLQSNMTD 480
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 164/330 (49%), Gaps = 9/330 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + N LI++ C + + A V K+ K P+I ++ L+ G +
Sbjct: 94 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ +M +GF+P+VV+YG +IN C A+ L R ME NC+P ++ +
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++++++A F + +G P TYN+++ A C +++EM
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + V+ L K G+ EA+ V M ++ G EP V TY ++ C +++D A
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR-GVEPNVVTYNALMDGHCLRSEMDEA 332
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M +G P + YSTLIN C +++ A F+EM + P +S L
Sbjct: 333 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 392
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L G + A+ L + +V RGQ
Sbjct: 393 LCHVGRLQDAIALFHE--------MVTRGQ 414
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 150/298 (50%), Gaps = 1/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ ++D LCK V A +V D M KR +P++ +Y L++G + + +V+ M
Sbjct: 281 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMV 340
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF PDVVSY +IN +C +R ++A+ LF EM P+ + TL++GL RL
Sbjct: 341 CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQ 400
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ F + RG P+ +Y ++ C + R+++A ++ + + P+ + Y IV+
Sbjct: 401 DAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVI 460
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ +AG E A +F +S K G P V TY I++ C + A +++ EMK +G
Sbjct: 461 DGMCRAGELEAARDLFSNLSSK-GLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P Y+ + ++ + QEML G + L + L D+G++++
Sbjct: 520 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSV 577
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + LI+ LCK A + M++ PD+ YT +++ + + +
Sbjct: 168 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 227
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G P + +Y +I+A C+ + L EM + P+ IF T+++
Sbjct: 228 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 287
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ EA KRG EP TYNA++ +C +++A ++ D M G P+
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 347
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y +++ K R E+A +F+ M RK P TY ++ C+ ++ A+ ++
Sbjct: 348 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKE-LIPNTVTYSTLMHGLCHVGRLQDAIALF 406
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM RG +P Y L++ LC +LD+A + + + P Q+++ + +
Sbjct: 407 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 466
Query: 305 GMEETA 310
G E A
Sbjct: 467 GELEAA 472
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 1/287 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N LI LC + + ++M + P++ ++ +++ ++ ++
Sbjct: 238 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 297
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V M G EP+VV+Y +++ HC DEAV++F M P + TLING
Sbjct: 298 HDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLING 357
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+R+ +A+ F + ++ P TY+ ++ C R+ DA + EM G P+
Sbjct: 358 YCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 417
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+L +L K R +EA ++ K + +P + Y IV+ C +++ A ++
Sbjct: 418 FVSYCILLDYLCKNRRLDEAIALLKAI-EGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 476
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
+ ++G+ P + Y+ +IN LC + L +A K F EM G P G
Sbjct: 477 SNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 523
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 2/277 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ + +N L+D C ++ A +VFD M + F PD+ SY+ L+ G+ + +
Sbjct: 304 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 363
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM P+ V+Y +++ C R +A+ LF EM P +C
Sbjct: 364 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 423
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L +RL EA+ + +P+ Y V+ C + + A + + G
Sbjct: 424 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 483
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY I+++ L + G EA +F M RK G P TY ++ R F N +
Sbjct: 484 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK-GYSPNGCTYNLITRGFLRNNETLRG 542
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+++ EM ARG + + L+ L +D LD + K
Sbjct: 543 IQLLQEMLARGFSADVSTSTVLVEML-SDDGLDQSVK 578
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 4/296 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F++M P I +T LL + K+ ++ + +M G P++ + I
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN+ C +R A + ++ +P+ F TLI GL E ++ E L F + G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+P TY ++ C + A R++ M + P+ Y ++ L K + +A+
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++F M + G P++ TY ++ C + + +EM ++P + ++ST++++
Sbjct: 229 NLFSEMIHQ-GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 287
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDEGMEETAVVLAQKIDK 319
LC E K+ +A M+ G+ P ++ L LR E M+E V + K
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE-MDEAVKVFDTMVCK 342
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 164/330 (49%), Gaps = 9/330 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + N LI++ C + + A V K+ K P+I ++ L+ G +
Sbjct: 85 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ +M +GF+P+VV+YG +IN C A+ L R ME NC+P ++ +
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++++++A F + +G P TYN+++ A C +++EM
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + V+ L K G+ EA+ V M ++ G EP V TY ++ C +++D A
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR-GVEPNVVTYNALMDGHCLRSEMDEA 323
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M +G P + YSTLIN C +++ A F+EM + P +S L
Sbjct: 324 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 383
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L G + A+ L + +V RGQ
Sbjct: 384 LCHVGRLQDAIALFHE--------MVTRGQ 405
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 150/298 (50%), Gaps = 1/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ ++D LCK V A +V D M KR +P++ +Y L++G + + +V+ M
Sbjct: 272 FSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMV 331
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF PDVVSY +IN +C +R ++A+ LF EM P+ + TL++GL RL
Sbjct: 332 CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQ 391
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ F + RG P+ +Y ++ C + R+++A ++ + + P+ + Y IV+
Sbjct: 392 DAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVI 451
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ +AG E A +F +S K G P V TY I++ C + A +++ EMK +G
Sbjct: 452 DGMCRAGELEAARDLFSNLSSK-GLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P Y+ + ++ + QEML G + L + L D+G++++
Sbjct: 511 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSV 568
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + LI+ LCK A + M++ PD+ YT +++ + + +
Sbjct: 159 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQA 218
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G P + +Y +I+A C+ + L EM + P+ IF T+++
Sbjct: 219 FNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 278
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ EA KRG EP TYNA++ +C +++A ++ D M G P+
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 338
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y +++ K R E+A +F+ M RK P TY ++ C+ ++ A+ ++
Sbjct: 339 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKE-LIPNTVTYSTLMHGLCHVGRLQDAIALF 397
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM RG +P Y L++ LC +LD+A + + + P Q+++ + +
Sbjct: 398 HEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRA 457
Query: 305 GMEETA 310
G E A
Sbjct: 458 GELEAA 463
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 1/287 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N LI LC + + ++M + P++ ++ +++ ++ ++
Sbjct: 229 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 288
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V M G EP+VV+Y +++ HC DEAV++F M P + TLING
Sbjct: 289 HDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLING 348
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+R+ +A+ F + ++ P TY+ ++ C R+ DA + EM G P+
Sbjct: 349 YCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 408
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+L +L K R +EA ++ K + +P + Y IV+ C +++ A ++
Sbjct: 409 FVSYCILLDYLCKNRRLDEAIALLKAI-EGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 467
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
+ ++G+ P + Y+ +IN LC + L +A K F EM G P G
Sbjct: 468 SNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 514
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 2/277 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ + +N L+D C ++ A +VFD M + F PD+ SY+ L+ G+ + +
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM P+ V+Y +++ C R +A+ LF EM P +C
Sbjct: 355 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L +RL EA+ + +P+ Y V+ C + + A + + G
Sbjct: 415 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY I+++ L + G EA +F M RK G P TY ++ R F N +
Sbjct: 475 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRK-GYSPNGCTYNLITRGFLRNNETLRG 533
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+++ EM ARG + + L+ L +D LD + K
Sbjct: 534 IQLLQEMLARGFSADVSTSTVLVEML-SDDGLDQSVK 569
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 4/296 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F++M P I +T LL + K+ ++ + +M G P++ + I
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN+ C +R A + ++ +P+ F TLI GL E ++ E L F + G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+P TY ++ C + A R++ M + P+ Y ++ L K + +A+
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++F M + G P++ TY ++ C + + +EM ++P + ++ST++++
Sbjct: 220 NLFSEMIHQ-GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDA 278
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDEGMEETAVVLAQKIDK 319
LC E K+ +A M+ G+ P ++ L LR E M+E V + K
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE-MDEAVKVFDTMVCK 333
>gi|147789025|emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 167/328 (50%), Gaps = 4/328 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FG + +FN L+ C R ++ A+ VF KM R F P+ K+ ILL G+ + ++ +
Sbjct: 180 FGREFGANEFNVLLRAFCTQRQMKEARSVFHKMHSR-FSPNTKTMNILLLGFKESGDVTA 238
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ Y EM GF+P+ V+Y I I+A+C + + + L EME NC P+ TLI+
Sbjct: 239 VELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIH 298
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G G + +S A + F + R +P+ YNA + + S + A +MDEM + GIG
Sbjct: 299 GAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGH 358
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
++ TY + L+++ E ++ +M R+ P T ++++ FC N Q+D+++ +
Sbjct: 359 DSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFV-PKTRTIVMLMKWFCQNQQLDLSLDL 417
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ-LFSNLKQALR 302
W + RG P H L+ LC K+ +A + ++ L+ G RP + +F L++ L
Sbjct: 418 WGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERG-RPMSEGVFRMLERYLV 476
Query: 303 DEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
+ G E L Q I KL RG
Sbjct: 477 EAGEGEMLWKLDQMIKKLHTVLPPSRGH 504
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 109/256 (42%), Gaps = 4/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K +N ID CK + ++M+K P +++ T L+ G G +N
Sbjct: 246 MIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQN 305
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ E+ +PD+ Y +++ ++ A+ L EME + T
Sbjct: 306 ISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHT 365
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ GL + + + + +R F P+ T ++ +C + +++ + + + G
Sbjct: 366 MFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRG 425
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ D+++ L G+ +EA K+ + G + + ++ R + +M
Sbjct: 426 YCPHGHALDLLVTGLCSHGKVKEAVECAKQTLER-GRPMSEGVFRMLERYLVEAGEGEML 484
Query: 241 MRIWDEM--KARGVLP 254
++ D+M K VLP
Sbjct: 485 WKL-DQMIKKLHTVLP 499
>gi|225460540|ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera]
gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 167/328 (50%), Gaps = 4/328 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FG + +FN L+ C R ++ A+ VF KM R F P+ K+ ILL G+ + ++ +
Sbjct: 180 FGREFGANEFNVLLRAFCTQRQMKEARSVFHKMHSR-FSPNTKTMNILLLGFKESGDVTA 238
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ Y EM GF+P+ V+Y I I+A+C + + + L EME NC P+ TLI+
Sbjct: 239 VELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIH 298
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G G + +S A + F + R +P+ YNA + + S + A +MDEM + GIG
Sbjct: 299 GAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGH 358
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
++ TY + L+++ E ++ +M R+ P T ++++ FC N Q+D+++ +
Sbjct: 359 DSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFV-PKTRTIVMLMKWFCQNQQLDLSLDL 417
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ-LFSNLKQALR 302
W + RG P H L+ LC K+ +A + ++ L+ G RP + +F L++ L
Sbjct: 418 WGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERG-RPMSEGVFRMLERYLV 476
Query: 303 DEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
+ G E L Q I KL RG
Sbjct: 477 EAGEGEMLWKLDQMIKKLHTVLPPSRGH 504
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 109/256 (42%), Gaps = 4/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K +N ID CK + ++M+K P +++ T L+ G G +N
Sbjct: 246 MIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQN 305
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ E+ +PD+ Y +++ ++ A+ L EME + T
Sbjct: 306 ISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHT 365
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ GL + + + + +R F P+ T ++ +C + +++ + + + G
Sbjct: 366 MFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLWGYLIDRG 425
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ D+++ L G+ +EA K+ + G + + ++ R + +M
Sbjct: 426 YCPHGHALDLLVTGLCSHGKVKEAVECAKQTLER-GRPMSEGVFRMLERYLVEAGEGEML 484
Query: 241 MRIWDEM--KARGVLP 254
++ D+M K VLP
Sbjct: 485 WKL-DQMIKKLHTVLP 499
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 159/282 (56%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + +N ++ LC+ VE A+ +F+KM K+R +P++ +Y L+ G +
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 199
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+++EM G+ P VSY +I+ C K A ++F +M +NC P+ + T
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL ++ A + K+G P TY+ ++ +C R+++A++++++M G
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 319
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY+I+L+ L +A + E+A+ +F+ M+++ PTV TY ++R C++ Q+D A
Sbjct: 320 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR-CHPTVVTYNTLLRALCHHKQLDGA 378
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
R++ EM A+G P Y TL L K+ +A + ++M
Sbjct: 379 HRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 150/296 (50%), Gaps = 2/296 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
K++ ++ +I+ LCK VE A+E+ +KM R PD +Y ++E + K +
Sbjct: 76 FKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVERLCKTKRIDDAL 134
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
EM G +PD Y +++ C ++ +EA LF +M P+ + TLINGL
Sbjct: 135 ATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGL 194
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+ A + F + +G+ P +YN ++ +C + A + D+M + PN
Sbjct: 195 CKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNV 254
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY ++ L K+G+ + A V M +K G P V+TY ++ FC +VD A ++ +
Sbjct: 255 VTYTTLIDGLSKSGKVQAAAEVLDGMVKK-GVTPNVATYSCLIDGFCKVRRVDEAHKLLE 313
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+M +G+ P + Y+ L+NSLC DKL+DA K F+ M P ++ L +AL
Sbjct: 314 QMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 369
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 146/326 (44%), Gaps = 2/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + LI LCK + + A ++ M+ +RF +Y+ ++ +
Sbjct: 36 MVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNR 95
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M PD ++YG ++ C KR D+A+ EM KP I+
Sbjct: 96 VEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNF 154
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL E+++ EA F + K+ P TYN ++ C + RI AY + EM G
Sbjct: 155 VLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P +Y+ ++ K A VF +M R P V TY ++ + +V A
Sbjct: 215 YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS-NCVPNVVTYTTLIDGLSKSGKVQAA 273
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ D M +GV P + YS LI+ C ++D+A K ++M+ GI P ++ L +
Sbjct: 274 AEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNS 333
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L E A L + + + R P V
Sbjct: 334 LCRADKLEDAFKLFRGMAQRRCHPTV 359
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 2/291 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M RR P ++ + +G+ + L + EVY+ M + G+ YGI+I+ C
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+DEA +L M K + T+IN L R+ EA + + R P+A TY
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELI-EKMARYAPPDALTYGP 119
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
+V C + RI+DA ++EM GI P+ Y+ VL L + + EEA +F++M ++
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
P V TY ++ C +++ A ++ EM +G +P Y+TLI+ C + L A
Sbjct: 180 -INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAA 238
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F +M+ P ++ L L G + A + + K TP V
Sbjct: 239 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNV 289
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 141/297 (47%), Gaps = 5/297 (1%)
Query: 4 FGLKQELP---DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
L++ +P FN + D K+ +E+ +EV+ M + + Y IL+ + N
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ M+ F+ ++Y +IN C R +EA EL +M A P +
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ L KR+ +AL + RG +P+A YN V+ C ++ +A + ++M K
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ +++ L KA R E AY +FK M+ K G PT +Y ++ FC + A
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGK-GYVPTEVSYNTLIDGFCKKKDLVAA 238
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++D+M +P + Y+TLI+ L K+ A + M+ G+ P +S L
Sbjct: 239 KDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 295
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ LCK+ +E A E+F +M + + P SY L++G+ ++K+L++ +V+ +M
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+VV+Y +I+ + + A E+ M P+ + LI+G +R+
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + Q +G P TYN ++ + C + ++ DA+++ M + P TY+ +L
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
L + + A+ ++ M K G P TY+ + +V A + ++MK
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAK-GCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+++LC++ +E A ++F M +RR P + +Y LL K L
Sbjct: 319 GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGA 378
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
+ +Y EM G PD ++Y + A + EA EL +M+ T P
Sbjct: 379 HRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 159/282 (56%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + +N ++ LC+ VE A+ +F+KM K+R +P++ +Y L+ G +
Sbjct: 35 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 94
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+++EM G+ P VSY +I+ C K A ++F +M +NC P+ + T
Sbjct: 95 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 154
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL ++ A + K+G P TY+ ++ +C R+++A++++++M G
Sbjct: 155 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 214
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY+I+L+ L +A + E+A+ +F+ M+++ PTV TY ++R C++ Q+D A
Sbjct: 215 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR-CHPTVVTYNTLLRALCHHKQLDGA 273
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
R++ EM A+G P Y TL L K+ +A + ++M
Sbjct: 274 HRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 151/313 (48%), Gaps = 1/313 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +++ LCK++ ++ A ++M R PD Y +L G Q++ + ++ +M
Sbjct: 12 YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 71
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+VV+Y +IN C A R + A ELF+EM P+ + TLI+G +K L
Sbjct: 72 KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLV 131
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A F + + P TY ++ S ++ A ++D M K G+ PN TY ++
Sbjct: 132 AAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLI 191
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K R +EA+ + ++M + G PTV TY I++ C +++ A +++ M R
Sbjct: 192 DGFCKVRRVDEAHKLLEQMVTQ-GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 250
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+TL+ +LCH +LD A + + EM+ G P + L L G A
Sbjct: 251 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 310
Query: 313 LAQKIDKLRKTPL 325
L +K+ ++ P
Sbjct: 311 LMEKMKLTKRNPF 323
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 39 RRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDE 98
R PD +Y ++E + K + EM G +PD Y +++ C ++ +E
Sbjct: 3 RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 62
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
A LF +M P+ + TLINGL R+ A + F + +G+ P +YN ++
Sbjct: 63 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 122
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
+C + A + D+M + PN TY ++ L K+G+ + A V M +K G
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK-GVT 181
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V+TY ++ FC +VD A ++ ++M +G+ P + Y+ L+NSLC DKL+DA K
Sbjct: 182 PNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKL 241
Query: 279 FQEMLDIGIRPPGQLFSNLKQAL 301
F+ M P ++ L +AL
Sbjct: 242 FRGMAQRRCHPTVVTYNTLLRAL 264
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
PD ++YG ++ C KR D+A+ EM KP I+ +++GL E+++ EA
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + K+ P TYN ++ C + RI AY + EM G P +Y+ ++ K
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
A VF +M R P V TY ++ + +V A + D M +GV P +
Sbjct: 127 KKDLVAAKDVFDKMVRS-NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
YS LI+ C ++D+A K ++M+ GI P ++ L +L E A L + +
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245
Query: 318 DKLRKTPLV 326
+ R P V
Sbjct: 246 AQRRCHPTV 254
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+++LC++ +E A ++F M +RR P + +Y LL K L
Sbjct: 214 GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGA 273
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
+ +Y EM G PD ++Y + A + EA EL +M+ T P
Sbjct: 274 HRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
AR P Y ++ LC ++DDA +EM GI+P +++ + L E E
Sbjct: 2 ARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVE 61
Query: 309 TAVVLAQKIDKLRKTPLV 326
A +L +K+ K R P V
Sbjct: 62 EARLLFEKMVKQRINPNV 79
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 163/298 (54%), Gaps = 5/298 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+D LCK+ V+ A +F+ M+ R F P +K +T LL GW ++ L+ V +++
Sbjct: 88 FGCLLDALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIR 146
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GFEPD+V Y ++ + +A + +A +L +EM C+P+ F TLI L ++K++
Sbjct: 147 EAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKME 206
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ F + + G +A TY ++ +C +I+ Y ++D M + G PN TY ++
Sbjct: 207 EAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIM 266
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K EE + + M RK G P ++ Y IV+R+ C ++ +R+W+EM+A G+
Sbjct: 267 AAHEKKEELEECIELMEEM-RKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGL 325
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP---GQLFSNLKQALRDEGME 307
P + + +I+ + L +AC++F+EM+ G+ G L L LR E +E
Sbjct: 326 SPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLE 383
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 146/317 (46%), Gaps = 1/317 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ +N L+ + + A ++ +M+++ +P++ S+T L++ +K +
Sbjct: 149 GFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEA 208
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ EM+ G D V+Y +I+ C + + EL M P+P + ++
Sbjct: 209 MRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAA 268
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ L E ++ + +K G P+ YN V+ C I + R+ +EM G+ P
Sbjct: 269 HEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPG 328
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
T+ I++H + EA FK M R + P T + ++ +++M+ +
Sbjct: 329 LDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDV 388
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
W + +G ++ ++ I++L + +AC Y +M+D G+ P F+ L + LR
Sbjct: 389 WSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRK 448
Query: 304 EGMEETAVVLAQKIDKL 320
+ A + +K+ K+
Sbjct: 449 LYNRQIAAEITEKVRKM 465
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
H+F L++ L + EA F + R F P + +++ +C ++ +A ++
Sbjct: 85 AHVFGCLLDALCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKLMEAKYVLV 143
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
++R+ G P+ Y+ +L AG+ +AY + K M RK EP V ++ +++ C
Sbjct: 144 QIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKE-CEPNVMSFTTLIQALCAK 202
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+++ AMR++ EM++ G Y+TLI+ C K+ + M+ G P +
Sbjct: 203 KKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTY 262
Query: 295 SNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++ A + E + L +++ K+ TP
Sbjct: 263 LHIMAAHEKKEELEECIELMEEMRKIGCTP 292
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 103/241 (42%), Gaps = 5/241 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + LI CK + + E+ D M ++ P+ +Y ++ +++
Sbjct: 215 MQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEE 274
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+ EM+ G PD+ Y I+I C E V ++ EMEAT P F
Sbjct: 275 LEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVI 334
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGF--EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+G S++ L EA +FF + RG P+ T ++ + + ++ + + +
Sbjct: 335 MIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMT 394
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF--CYNAQ 236
G N + I +H L G +EA S M G P T+ ++R YN Q
Sbjct: 395 KGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMM-DAGVMPQPDTFAKLMRGLRKLYNRQ 453
Query: 237 V 237
+
Sbjct: 454 I 454
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 165/313 (52%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G ++ + LID LC +R ++ A+EVF+KMK R PD +Y LL+ + ++
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L S+ + + EM+ DG PDVV++ I+++A C A + EA + M P+ H + T
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL RL +AL+ FG + G +P A TY + Y S A ++M+ G
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 463
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + L+ L KAGR EA +F + + G P TY ++++ + ++D A
Sbjct: 464 IAPNIVACNASLYSLAKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ EM G P + + ++LIN+L D++D+A K F M ++ ++P ++ L
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 301 LRDEGMEETAVVL 313
L G + A+ L
Sbjct: 583 LGKNGKIQEAIEL 595
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 163/316 (51%), Gaps = 3/316 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G++ +LP +N LI L ++ +E AQ+VF ++K PD+ +Y LL+ +G+ +
Sbjct: 779 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDE 838
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE-MEATNCKPSPHIFCTLI 122
+ E+Y+EM E + +++ I+I+ A D+A++L+ + M + P+ + LI
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL RL EA Q F G P YN ++ + + + A + M K G+
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ +TY +++ L GR +E FK + ++ G P V Y +++ + +++ A+
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 243 IWDEMK-ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+++EMK +RG+ P ++ Y++LI +L +++A K + E+ G+ P F+ L +
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Query: 302 RDEGMEETAVVLAQKI 317
G E A + Q +
Sbjct: 1078 SLSGKPEHAYAVYQTM 1093
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 172/378 (45%), Gaps = 52/378 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG +N LI L KSR A EV+ +M F P +++Y+ L+ G G++++
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 61 LLS--------------------------------MNEVY---REMKDDGFEPDVVSYGI 85
+ S +NE Y + M D+G PDVV+Y +
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+A C+A++ D A E+F +M+ KP + TL++ + L QF+ + +K G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ T+ +V A C + +A+ +D MR GI PN TY+ ++ L++ R ++A
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F M G +PT TY + + + + A+ +++MK +G+ P + + + S
Sbjct: 419 ELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFS----------------NLKQALRDEGMEET 309
L + +A + F + DIG+ P ++ L + + G E
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 310 AVVLAQKIDKLRKTPLVD 327
+V+ I+ L K VD
Sbjct: 538 VIVVNSLINTLYKADRVD 555
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 135/315 (42%), Gaps = 34/315 (10%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +++ L +E VFD M+KR D +Y + + + L R+M++
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GF + SY +I+ ++ EA+E++R M +PS + +L+ GLG + +
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ + + G +P T+ + + +IN+AY ++ M G GP+ TY +++
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 194 HLIKAGRTEEAYSVFKRMS----------------------------------RKPGTEP 219
L A + + A VF++M K G P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V T+ I+V C A D M+ +G+LP +H Y+TLI L +LDDA + F
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 280 QEMLDIGIRPPGQLF 294
M +G++P +
Sbjct: 422 GNMESLGVKPTAYTY 436
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 136/278 (48%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ L +N LI L + ++ A E+F M+ P +Y + ++ +G+ + +S
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 452
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + +MK G P++V+ + + A R EA ++F ++ P + ++
Sbjct: 453 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 512
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EA++ + + G EP+ N+++ + R+++A++M M++ + P
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +L L K G+ +EA +F+ M +K G P T+ + C N +V +A+++
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+M G +P + Y+T+I L ++ +A +F +M
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 141/319 (44%), Gaps = 5/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + ID KS A E F+KMK + P+I + L +
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ +KD G PD V+Y +M+ + DEA++L EM C+P + +
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN L R+ EA + F + K+ +P TYN ++ + +I +A + + M + G
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYS-VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
PNT T++ + L K A +FK M G P V TY ++ N QV
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM--GCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF-SNLK 298
AM + +MK + V P TL+ + ++DA K L P LF +L
Sbjct: 662 AMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLI 720
Query: 299 QALRDEGMEETAVVLAQKI 317
++ E + AV ++++
Sbjct: 721 GSILAEAGIDNAVSFSERL 739
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 31/298 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + N + +L K+ A+++F +K PD +Y ++++ + + +
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM ++G EPDV+ +IN A R DEA ++F M+ KP+ + TL+ G
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
LG ++ EA++ F ++G P T+N + C + + A +M+ +M G P+
Sbjct: 583 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSR------------KPGTEPTV---STYEIVVR 229
TY+ ++ L+K G+ +EA F +M + PG Y+I+
Sbjct: 643 VFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITN 702
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
F YN A W++ LI S+ E +D+A + + ++ GI
Sbjct: 703 -FLYNCADQPANLFWED---------------LIGSILAEAGIDNAVSFSERLVANGI 744
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + +N LI+ K+ + A +F +M K PD+K+Y++L++
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCKPSPHIFC 119
+ ++E+K+ G PDVV Y ++IN + R +EA+ LF EM+ + P + +
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI LG + EA + + + ++ G EP T+NA++ Y S + AY + M
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 180 GIGPNTRTYD 189
G PNT TY+
Sbjct: 1097 GFSPNTGTYE 1106
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 2/251 (0%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
KD G +P + +Y ++I A + A ++F ++++T C P + L++ G ++
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM-DEMRKCGIGPNTRTYDI 190
E + + + E T+N V+ + ++DA + D M P TY
Sbjct: 837 DELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 896
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L K+GR EA +F+ M G P + Y I++ F + D A ++ M
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGM-LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
GV P + YS L++ LC ++D+ YF+E+ + G+ P ++ + L E A
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 311 VVLAQKIDKLR 321
+VL ++ R
Sbjct: 1016 LVLFNEMKTSR 1026
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 141/343 (41%), Gaps = 47/343 (13%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------------ 54
+PD +N +I L K+ V+ A F +MKK + PD + LL G
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYK 698
Query: 55 ---------WGQQKNLLSMNEVYREMKDDG------FEPDVVSYGI----------MINA 89
Q NL + + + + G F +V+ GI +I
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 90 HCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C A LF + + +P + LI GL + A F Q K G P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ TYN ++ AY S +I++ + + EM NT T++IV+ L+KAG ++A ++
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+ PT TY ++ + ++ A ++++ M G P +Y+ LIN
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-----RDEGM 306
+ D AC F+ M+ G+RP + +S L L DEG+
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ L + +L E F +KR + + TY + + + A + +MR+ G
Sbjct: 124 MLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFG 183
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N +Y+ ++H L+K+ EA V++RM + G P++ TY ++ +D
Sbjct: 184 FVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE-GFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + EM+ G+ P ++ ++ I L K+++A + + M D G P ++ L A
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 301 L 301
L
Sbjct: 303 L 303
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLS 63
GL ++ +N +I+ L KS +E A +F++MK R PD+ +Y L+ G +
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y E++ G EP+V ++ +I + + + + A +++ M P+ + L N
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 170/341 (49%), Gaps = 17/341 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N +ID +CK VE A+ +F++MK R PD +Y +++G+G+ L
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EMKD EPDV++Y +IN C + +E +REM+ KP+ + TL++
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + +A++F+ ++ G P TY +++ A C ++DA+R+ +EM + G+ N
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L A R +EA +F +M G P +++Y ++ F +D A+ +
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMD-TAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+E+K RG+ P + +Y T I LC +K++ A EM + GI+ +++ L A
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 305 G----------------MEETAVVLAQKIDKLRKTPLVDRG 329
G +E T V ID L K LV +
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L L +E A + F KMK+ R P +S LL + + + +++M
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P V +Y IMI+ C + A LF EM+ P + ++I+G G RL
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + FF + K EP+ TYNA++ +C ++ EM+ G+ PN +Y ++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G ++A + M R+ G P TY ++ C + A R+ +EM GV
Sbjct: 375 DAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+ LI+ LC +++ +A + F +M G+ P
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 147/355 (41%), Gaps = 70/355 (19%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + ++ L+D CK +++A + + M++ P+ +YT L++ + NL
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM G E +VV+Y +I+ C A+R EA ELF +M+ P+ + LI+G
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + AL+ + K RG +P+ Y + C +I A +M+EM++CGI N
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 185 TRTYDIVLHHLIKAGRTEE-----------------------------------AYSVFK 209
+ Y ++ K+G E A F
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV-------------- 255
R+S G + + + ++ C + QV+ A ++++M +G++P
Sbjct: 602 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 661
Query: 256 ---------------------MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y++L+ L H ++L A + +EM+ GI P
Sbjct: 662 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 145/301 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK ++ A + ++M + + ++ +YT L++G +
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ +M G P++ SY +I+ AK D A+EL E++ KP ++ T
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I GL S +++ A + K+ G + + Y ++ AY S + ++DEM++
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I T+ +++ L K +A F R+S G + + + ++ C + QV+ A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++M +G++P Y++L++ + + +A +M +IG++ +++L
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 301 L 301
L
Sbjct: 693 L 693
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 51/281 (18%)
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN---------------CKPS 114
M +GF+ V SY I+ + A+ Y +A + +EM + C P
Sbjct: 132 SMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPG 191
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKK------------------------------- 143
+F L + L L EA+Q F + K+
Sbjct: 192 FGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFK 251
Query: 144 ----RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
G P TYN ++ C + A + +EM+ G+ P+T TY+ ++ K G
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
R ++ F+ M + EP V TY ++ FC ++ + + + EMK G+ P + Y
Sbjct: 312 RLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
STL+++ C E + A K++ +M +G+ P +++L A
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ FGL+ F +ID LCK VE A +F++M ++ PD +YT L++G +Q N+
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
L + +M + G + D+++Y ++ + +A EM P
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 89/205 (43%), Gaps = 1/205 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K + L+D KS + + D+MK+ + + ++ +L++G + K
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 592
Query: 61 LLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + + + +D G + + + MI+ C + + A LF +M P +
Sbjct: 593 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 652
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+L++G + + EAL + + G + + Y ++V ++ A ++EM
Sbjct: 653 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEA 204
GI P+ VL + G +EA
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEA 737
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 161/313 (51%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G ++ + LID LC + + A+E+F KMK PD +Y LL+ + +
Sbjct: 288 MDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGD 347
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E + EM+ DG+ PDVV++ I+I+A C + DEA M+ P+ H + T
Sbjct: 348 LDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNT 407
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL RL EAL+ F + G E A TY + Y S A + ++M+ G
Sbjct: 408 LICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNG 467
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + L+ L + GR EEA F + +K G P TY I++R + +VD A
Sbjct: 468 IVPNIVACNASLYSLAEQGRLEEAKEFFNGL-KKCGLAPDAITYNILMRCYGKAGRVDDA 526
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ EM+ G P + + ++LI++L D++D+A K FQ M ++ + P ++ L
Sbjct: 527 IKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAG 586
Query: 301 LRDEGMEETAVVL 313
L EG + A L
Sbjct: 587 LGKEGRVQEATAL 599
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 165/315 (52%), Gaps = 1/315 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K L ++ L+ L K R +E + +M+ P+I ++TI + G+ +
Sbjct: 222 GIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEA 281
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M D G PDVV+Y ++I+A C+A + + A ELF +M+A++ KP + TL++
Sbjct: 282 YGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDK 341
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +F+ + + G+ P+ T+ ++ A C ++++A+ +D M+K G+ PN
Sbjct: 342 FSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPN 401
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L++ R +EA +F M G E T TY + + + + + A++ +
Sbjct: 402 LHTYNTLICGLLRLNRLDEALELFNSM-ESLGLETTAYTYILFIDYYGKSGESGKAIKTF 460
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++MK G++P + + + SL + +L++A ++F + G+ P ++ L +
Sbjct: 461 EKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKA 520
Query: 305 GMEETAVVLAQKIDK 319
G + A+ L ++++
Sbjct: 521 GRVDDAIKLLSEMEE 535
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 152/286 (53%), Gaps = 1/286 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
F + L +N LID L K+R E A +F KMK PD+ +Y + L+ G+ +
Sbjct: 782 FCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKE 841
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ ++Y EM G +P+ +++ I+I + D+A++L+ ++ + + P+P + LI+
Sbjct: 842 LFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL RL EA QFF + G P P YN ++ + + A + M K GI P
Sbjct: 902 GLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRP 961
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ ++Y I++ L G+ ++A F+ + + G +P + Y +++ + +V+ A+ +
Sbjct: 962 DLKSYSIMVDCLCMVGKVDDALHYFEEL-KLSGLDPDLVCYNLMINGLGRSQRVEEALSL 1020
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+DEM+ RG+ P ++ Y+ LI +L +++A K ++E+ G+ P
Sbjct: 1021 FDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEP 1066
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 143/318 (44%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL+ + ID KS +A + F+KMK P+I + L +Q
Sbjct: 428 MESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGR 487
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E + +K G PD ++Y I++ + A R D+A++L EME C P I +
Sbjct: 488 LEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINS 547
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ EA + F + K+ P TYN ++ R+ +A + M
Sbjct: 548 LIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADD 607
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT +++ +L L K G + A + RM+ P V TY V+ +V+ A
Sbjct: 608 CPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEM-NCFPDVLTYNTVIYGLIKENRVNYA 666
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML-DIGIRPPGQLFSNLKQ 299
++ +MK + + P TL+ + + +++DA + +E + +G G + +L
Sbjct: 667 FWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMG 725
Query: 300 ALRDEGMEETAVVLAQKI 317
+ E +++ A+ +
Sbjct: 726 GILIEAEIGQSILFAESL 743
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + LI L KS A +V+ +M P +K+Y+ L+ G++++
Sbjct: 183 MRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRD 242
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + +EM+ G P++ ++ I I A + DEA + + M+ C P +
Sbjct: 243 IETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTV 302
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + +L+ A + F + K +P+ TY ++ + ++ EM G
Sbjct: 303 LIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADG 362
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T+ I++ L K G+ +EA+ M +K G P + TY ++ ++D A
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDEAFGTLDVM-KKQGVAPNLHTYNTLICGLLRLNRLDEA 421
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +++ M++ G+ + Y I+ + A K F++M GI P
Sbjct: 422 LELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVP 470
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 132/308 (42%), Gaps = 34/308 (11%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +++ L R VE VF+ M+K+ I +Y + + + L +M+
Sbjct: 126 NYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRK 185
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GF + SY +I+ + EA++++R M + KPS + L+ LG + +
Sbjct: 186 VGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIET 245
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ + + G P T+ + + +I++AY ++ M G GP+ TY +++
Sbjct: 246 VMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLID 305
Query: 194 HLIKAGRTEEAYSVFKRM---SRKP-------------------------------GTEP 219
L AG+ A +F +M S KP G P
Sbjct: 306 ALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLP 365
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V T+ I++ C +VD A D MK +GV P +H Y+TLI L ++LD+A + F
Sbjct: 366 DVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELF 425
Query: 280 QEMLDIGI 287
M +G+
Sbjct: 426 NSMESLGL 433
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 148/344 (43%), Gaps = 39/344 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+D LCK+ V+ A ++ +M + PD+ +Y ++ G ++ + ++ +MK
Sbjct: 615 FNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK 674
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-------------------------- 106
+ PD V+ ++ R ++A + +E
Sbjct: 675 KVIY-PDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEI 733
Query: 107 -------EATNCKP---SPHIFCTLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNA 155
E+ C + L+ L + +A F + +K P YN+
Sbjct: 734 GQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNS 793
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ + A+ + +M+ G P+ TY++ L L K+G+ +E + +++ M +
Sbjct: 794 LIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFR- 852
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G +P T+ IV+ + +D A+ ++ ++ + P Y LI+ L +L++A
Sbjct: 853 GCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEA 912
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
++F+EMLD G P L++ L +G ETA L +++ K
Sbjct: 913 KQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVK 956
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 63/119 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +L +N +I+ L +S+ VE A +FD+M+ R PD+ +Y L+ G +
Sbjct: 993 GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y E++ G EP+V +Y +I H + D A ++++M C+P+ F L N
Sbjct: 1053 GKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
R+ D + + M+K I + TY + L G EA ++M RK G +Y
Sbjct: 137 RVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKM-RKVGFVLNGYSY 195
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ + + A++++ M + G+ P + YS L+ +L ++ QEM
Sbjct: 196 IGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMES 255
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+G+RP F+ + L G + A + +++D
Sbjct: 256 LGLRPNIYTFTICIRILGRAGKIDEAYGILKRMD 289
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 154/286 (53%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + F L+D L K+ V+ A E+ D+MK+R P + +Y L+ G+G+ +
Sbjct: 210 MKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGD 269
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ + EMK +G +PDVV+Y +I A + DEA ++ ++ME C P + T
Sbjct: 270 LVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNT 329
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGLG L++A + F + K +G P+ TY+ ++ A + R+ A + +EM G
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVG 389
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY ++ L KAG+ ++A +F M R G P V TY + + A
Sbjct: 390 IQPDLFTYCSIITVLGKAGQVDDADRLFSEM-RGKGLSPDVITYNAFLNSLGRGGRFKEA 448
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+I+++MK G+LP + Y L+ L ++DDAC +E+++ G
Sbjct: 449 RKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 162/324 (50%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K L +N L+D L K+ + A + +M+ PD+++Y L+ G+
Sbjct: 70 MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM++ G PD +Y +I R +A+EL EME C P + +
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GLG + +A + F + K+RG +P++ T+ A++ A + R++DA ++DEM++ G
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ ++ K G EAY++ M R G +P V TY ++ +Q+D A
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN-GCKPDVVTYSCLITGLIKASQLDEA 308
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ +M+ G P Y+TLIN L L+DA + F M G P +S L A
Sbjct: 309 CQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITA 368
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L E+A VL ++++ + P
Sbjct: 369 LGKAARVESACVLFEEMESVGIQP 392
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 156/307 (50%), Gaps = 1/307 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L++ L K+ E AQ +F+++K ++ PD+ SY+ L+ G+ + EV EM+
Sbjct: 12 YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P++ +Y +++ A ++DEA+ L EM C P + LI+ LG RLS
Sbjct: 72 AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + ++RG P+ TYN+++ R A +++EM + G P+ TY ++
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K G T +A+ +F+ M R+ G +P T+ ++ +VD A+ + DEMK RGV
Sbjct: 192 TGLGKDGETVKAFKLFQEMKRR-GRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ LI L +A EM G +P +S L L + A
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310
Query: 313 LAQKIDK 319
+ +K++K
Sbjct: 311 VLKKMEK 317
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 135/247 (54%), Gaps = 1/247 (0%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P++ +Y LL + ++ E+K + PDVVSY +IN+ A +++ A+E+
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
EM+A CKP+ + TL++ LG + EAL+ + + G P+ TYN ++
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
+ R+++A+ + EMR+ G P+T TY+ +++ L K GR+++A + + M R G P V
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERH-GCPPDVM 185
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY ++ + + A +++ EMK RG P ++ L+++L ++DDA + EM
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245
Query: 283 LDIGIRP 289
+ G++P
Sbjct: 246 KERGVKP 252
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 153/305 (50%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G + +N LI+ L K+ + A +FD+MK + +PD+ +Y+ L+ G+
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S ++ EM+ G +PD+ +Y +I A + D+A LF EM P +
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+N LG R EA + F K+ G P+ TY+A++ + ++DA ++ E+ + G
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
++ +D L L G +EA+ + + + K G P S+Y ++ +V A
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSK-GLWPGASSYNALIDALAKAGRVSEA 553
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++K +G P + YS+LI++L ++D A + +EM G++ + +SNL +
Sbjct: 554 FNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRK 613
Query: 301 LRDEG 305
L+D G
Sbjct: 614 LQDWG 618
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%)
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V TY ++ Q + A +++E+KA P + YS LINSL K + A +
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
EM G +P ++ L L G + A+ L
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRL 101
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 158/305 (51%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + +N +ID CK R + A ++ M + +P++ SY +++ G ++
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E+ EM + PD V++ +IN +C+ + +A+ L EM P+ + T
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN + L+ A++F Q + RG P TY ++ + + AY++M EM + G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY+ +++ GR E+A + + M + G P V +Y ++ FC N +++ A
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIER-GFIPDVVSYSTIISGFCRNQELEKA 467
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM A+G+ P + YS+LI LC + +L + C FQEML +G+ P +++L A
Sbjct: 468 FQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINA 527
Query: 301 LRDEG 305
EG
Sbjct: 528 YCIEG 532
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 143/285 (50%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL L +N +I+ LC+ ++ E+ ++M KRR+ PD ++ L+ G+ N
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM +G P+VV+Y +IN+ C A + A+E +M P+ + TLI+G
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L +A Q + + GF P TYNA++ +C R+ DA ++ EM + G P+
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y ++ + E+A+ + M K G P V+TY +++ C ++ ++
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAK-GISPDVATYSSLIQGLCKQRRLGEVCDLF 506
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM + G+ P Y++LIN+ C E LD A + EM+ G P
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 167/373 (44%), Gaps = 54/373 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + + LI+++CK+ ++ RA E D+M+ R P+ ++YT L++G+ QQ
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR---------------- 104
L ++ +EM ++GF P +++Y +IN HC R ++A L +
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 105 -------------------EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
EM A P + +LI GL ++RL E F + G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ TY +++ AYC ++ A R+ DEM + G P+ TY+++++ K RT+EA
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573
Query: 206 SVFKRMSRKPGTEPTVSTYEIVV---------------RMFCYNAQVDMAMRIWDEMKAR 250
+ ++ + P TY ++ + FC ++ A R+ + M +
Sbjct: 574 RLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQK 632
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G +Y+ +I+ ++ A ++EML G P L ++L EG E
Sbjct: 633 GYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE--- 689
Query: 311 VVLAQKIDKLRKT 323
V L Q +D K+
Sbjct: 690 VELNQLLDYTLKS 702
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 142/287 (49%), Gaps = 2/287 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+G + +N ++D + +++ V+ A+ +F +M + P++ +Y IL+ G+ NL
Sbjct: 161 YGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLE 220
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ EM+ +G P+VV+Y +I+A+C ++ EA +L R M P+ + +I
Sbjct: 221 MGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVI 280
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL E ++ E + + KR + P+ T+N ++ YC + A + EM K G+
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY +++ + KAG A +M R G P TY ++ F + A +
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQM-RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
I EM G P + Y+ LIN C +++DA QEM++ G P
Sbjct: 400 IMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP 446
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 133/256 (51%), Gaps = 2/256 (0%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVE-LFREMEATNCKPSPHIFCTLINGLGSEKR 130
K GF P V+SY +++A K+ + E +F+EM + P+ + + LI G +
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGN 218
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L L FFG+ ++ G P TYN ++ AYC +I +A++++ M G+ PN +Y++
Sbjct: 219 LEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNV 278
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
V++ L + G+ +E + + MS++ P T+ ++ +C A+ + EM
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYV-PDRVTFNTLINGYCNVGNFHQALVLHAEMVKN 337
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G+ P + Y+TLINS+C L+ A ++ +M D G+ P G+ ++ L +G + A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397
Query: 311 VVLAQKIDKLRKTPLV 326
+ +++ + TP +
Sbjct: 398 YQIMKEMVENGFTPTI 413
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 142/312 (45%), Gaps = 25/312 (8%)
Query: 2 DKFGLKQE------LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
D GL QE +PD ++ +I C+++ +E+A ++ +M + PD+ +Y+ L+
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+G +Q+ L + ++++EM G PD V+Y +INA+C D+A+ L EM
Sbjct: 491 QGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN---------------AVV 157
P + LING + R EA + + P TYN A++
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALM 610
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+C +N+A R+++ M + G N Y++++H K G E+AY+++K M
Sbjct: 611 KGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFA 670
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+V+ + ++ +V++ + +K+ + + LI E +D
Sbjct: 671 PHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAA-LAKVLIGINSKEGNMDAVFN 729
Query: 278 YFQEMLDIGIRP 289
++M G+ P
Sbjct: 730 VLKDMALSGLLP 741
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR-INDA 169
CK S +F ++ +++AL +K GF P +YNA++ A + + + A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ EM + G+ PN TY+I++ AG E F M R G P V TY ++
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERN-GCLPNVVTYNTIID 246
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+C ++ A ++ M +G+ P + Y+ +IN LC E ++ + + +EM P
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+ L + G A+VL ++ K +P V
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 158/305 (51%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + +N +ID CK R + A ++ M + +P++ SY +++ G ++
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E+ EM + PD V++ +IN +C+ + +A+ L EM P+ + T
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN + L+ A++F Q + RG P TY ++ + + AY++M EM + G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY+ +++ GR E+A + + M + G P V +Y ++ FC N +++ A
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIER-GFIPDVVSYSTIISGFCRNQELEKA 467
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM A+G+ P + YS+LI LC + +L + C FQEML +G+ P +++L A
Sbjct: 468 FQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINA 527
Query: 301 LRDEG 305
EG
Sbjct: 528 YCIEG 532
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 143/285 (50%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL L +N +I+ LC+ ++ E+ ++M KRR+ PD ++ L+ G+ N
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM +G P+VV+Y +IN+ C A + A+E +M P+ + TLI+G
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L +A Q + + GF P TYNA++ +C R+ DA ++ EM + G P+
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y ++ + E+A+ + M K G P V+TY +++ C ++ ++
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAK-GISPDVATYSSLIQGLCKQRRLGEVCDLF 506
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM + G+ P Y++LIN+ C E LD A + EM+ G P
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSP 551
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 167/373 (44%), Gaps = 54/373 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + + LI+++CK+ ++ RA E D+M+ R P+ ++YT L++G+ QQ
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR---------------- 104
L ++ +EM ++GF P +++Y +IN HC R ++A L +
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453
Query: 105 -------------------EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
EM A P + +LI GL ++RL E F + G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ TY +++ AYC ++ A R+ DEM + G P+ TY+++++ K RT+EA
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573
Query: 206 SVFKRMSRKPGTEPTVSTYEIVV---------------RMFCYNAQVDMAMRIWDEMKAR 250
+ ++ + P TY ++ + FC ++ A R+ + M +
Sbjct: 574 RLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQK 632
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G +Y+ +I+ ++ A ++EML G P L ++L EG E
Sbjct: 633 GYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKE--- 689
Query: 311 VVLAQKIDKLRKT 323
V L Q +D K+
Sbjct: 690 VELNQLLDYTLKS 702
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 142/287 (49%), Gaps = 2/287 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+G + +N ++D + +++ V+ A+ +F +M + P++ +Y IL+ G+ NL
Sbjct: 161 YGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLE 220
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ EM+ +G P+VV+Y +I+A+C ++ EA +L R M P+ + +I
Sbjct: 221 MGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVI 280
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL E ++ E + + KR + P+ T+N ++ YC + A + EM K G+
Sbjct: 281 NGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLS 340
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY +++ + KAG A +M R G P TY ++ F + A +
Sbjct: 341 PNVVTYTTLINSMCKAGNLNRAMEFLDQM-RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
I EM G P + Y+ LIN C +++DA QEM++ G P
Sbjct: 400 IMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP 446
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 133/256 (51%), Gaps = 2/256 (0%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVE-LFREMEATNCKPSPHIFCTLINGLGSEKR 130
K GF P V+SY +++A K+ + E +F+EM + P+ + + LI G +
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGN 218
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L L FFG+ ++ G P TYN ++ AYC +I +A++++ M G+ PN +Y++
Sbjct: 219 LEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNV 278
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
V++ L + G+ +E + + MS++ P T+ ++ +C A+ + EM
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYV-PDRVTFNTLINGYCNVGNFHQALVLHAEMVKN 337
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G+ P + Y+TLINS+C L+ A ++ +M D G+ P G+ ++ L +G + A
Sbjct: 338 GLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQA 397
Query: 311 VVLAQKIDKLRKTPLV 326
+ +++ + TP +
Sbjct: 398 YQIMKEMVENGFTPTI 413
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 142/312 (45%), Gaps = 25/312 (8%)
Query: 2 DKFGLKQE------LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
D GL QE +PD ++ +I C+++ +E+A ++ +M + PD+ +Y+ L+
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLI 490
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+G +Q+ L + ++++EM G PD V+Y +INA+C D+A+ L EM
Sbjct: 491 QGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFS 550
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN---------------AVV 157
P + LING + R EA + + P TYN A++
Sbjct: 551 PDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALM 610
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+C +N+A R+++ M + G N Y++++H K G E+AY+++K M
Sbjct: 611 KGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFA 670
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+V+ + ++ +V++ + +K+ + + LI E +D
Sbjct: 671 PHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAA-LAKVLIGINSKEGNMDAVFN 729
Query: 278 YFQEMLDIGIRP 289
++M G+ P
Sbjct: 730 VLKDMALSGLLP 741
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR-INDA 169
CK S +F ++ +++AL +K GF P +YNA++ A + + + A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ EM + G+ PN TY+I++ AG E F M R G P V TY ++
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERN-GCLPNVVTYNTIID 246
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+C ++ A ++ M +G+ P + Y+ +IN LC E ++ + + +EM P
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+ L + G A+VL ++ K +P V
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNV 343
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 166/307 (54%), Gaps = 2/307 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI+ C+S +E A ++F++M+ + +P++ + L++G + + + E +R M+
Sbjct: 266 FNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQ 325
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + + V+Y + INA C+ ++A+E EM C P ++ TLI GL RL
Sbjct: 326 QKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLD 385
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + K+ GF + YN ++ +C +++ A ++EM G+ P++ TY+ ++
Sbjct: 386 DASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLI 445
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK--AR 250
+ K G + A+ K+M+ + G PTV TY ++ +C N +D A++I+ EM A
Sbjct: 446 SYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVAS 505
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
V P +Y+ LI+SLC + +++ A +M G+ P ++++ +ALRD+ + A
Sbjct: 506 KVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKA 565
Query: 311 VVLAQKI 317
L ++
Sbjct: 566 FKLMDRM 572
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 138/295 (46%), Gaps = 10/295 (3%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+ KFG PD +LI LC+S + A + D + D LL G G+
Sbjct: 105 VSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGK 164
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN------C 111
+ MN + R+MKD +P V+++GI+IN C +R D+A+E+F +M+
Sbjct: 165 AREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFV 224
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
P ++ TLI+GL R EAL G+ + P T+N ++ YC S I A++
Sbjct: 225 APDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHK 284
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ +EM I PN T + ++ + K R A F+ M +K G + TY + + F
Sbjct: 285 LFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQK-GLKGNNVTYTVFINAF 343
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
C ++ AM DEM G P +Y TLI L +LDDA ++ + G
Sbjct: 344 CNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAG 398
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 129/299 (43%), Gaps = 8/299 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK P N L+ L K+R + + KMK P + ++ IL+ + + +
Sbjct: 148 GLKDAAP-CNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDA 206
Query: 65 NEVYREMKDDGFE------PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
EV+ +MK + E PD + Y +I+ C R +EA+ L +M + C P+ F
Sbjct: 207 LEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATF 266
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LING + A + F + + EP T N +V C RI+ A M++
Sbjct: 267 NCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQ 326
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ N TY + ++ +A MS K G P Y ++ ++D
Sbjct: 327 KGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMS-KDGCFPDAVVYYTLICGLAQAGRLD 385
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A + ++K G Y+ LI+ C ++KLD A ++ EM G++P ++ L
Sbjct: 386 DASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTL 444
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 3/190 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM- 71
+N LI CK ++RAQE ++M+ PD +Y L+ + + N ++ ++M
Sbjct: 406 YNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMT 465
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME--ATNCKPSPHIFCTLINGLGSEK 129
+++G P V +YG +I+A+C DEA+++F+EM A+ P+ I+ LI+ L +
Sbjct: 466 EEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQT 525
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+++ AL K RG P TYN++ A ++ A+++MD M + P+ T +
Sbjct: 526 QVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITME 585
Query: 190 IVLHHLIKAG 199
I+ L G
Sbjct: 586 ILTEWLSAVG 595
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 119/318 (37%), Gaps = 62/318 (19%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKM--KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
N +I+ L KS V+ A V D+M + F P+ K+ I+ NLL ++ + +
Sbjct: 43 NEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFN------NLLKIDGLEGRV 96
Query: 72 KDDGFE------------PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
K+D PD ++ +I+ C + + A + + N
Sbjct: 97 KEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCN 156
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-- 177
L+ GLG + + + K +P T+ ++ C RI+DA + ++M+
Sbjct: 157 ALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGE 216
Query: 178 ----KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
K + P+T Y+ ++ L K GR EEA + +M R PT +T+
Sbjct: 217 KEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKM-RSDQCAPTTATF--------- 266
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+ LIN C +++ A K F EM + I P
Sbjct: 267 --------------------------NCLINGYCRSGEIEVAHKLFNEMENAQIEPNVIT 300
Query: 294 FSNLKQALRDEGMEETAV 311
+ L + TAV
Sbjct: 301 LNTLVDGMCKHNRISTAV 318
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 15/255 (5%)
Query: 86 MINAHCSAKRYDEAVELFREMEAT------NCKPSPHIFCTL--INGLGSEKRLSEALQF 137
+IN + R D A+ + EM N K + +F L I+GL + E
Sbjct: 45 IINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGL 104
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ K P+ ++ C S N A+ ++D + + + +L L K
Sbjct: 105 VSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGK 164
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG------ 251
A R ++ R + +PTV T+ I++ C ++D A+ ++++MK
Sbjct: 165 A-REFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVF 223
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
V P MY+TLI+ LC + ++A +M P F+ L G E A
Sbjct: 224 VAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAH 283
Query: 312 VLAQKIDKLRKTPLV 326
L +++ + P V
Sbjct: 284 KLFNEMENAQIEPNV 298
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 163/320 (50%), Gaps = 2/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG+K + D ++L+ +LC +HV AQE FDK K P K+Y+IL+ GW + ++
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+V+ EM ++ D+++Y +++A C + D A ++F+EM KP + F
Sbjct: 224 ASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPDAYSFAI 283
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I+ + A Q + K+ P T+N ++ C + +++DAY ++DEM + G
Sbjct: 284 FIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T TY+ ++ + A + RM R P TY +V+++ + D
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL-PDRHTYNMVLKLLIRIGRFDRV 402
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
IW+ M R P + Y+ +I+ L + KL++AC+YF+ M+D GI P L+
Sbjct: 403 TEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRN 462
Query: 300 ALRDEGMEETAVVLAQKIDK 319
L G + VLA K+++
Sbjct: 463 RLVGWGQMDVVDVLAGKMER 482
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 132/285 (46%), Gaps = 2/285 (0%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD-DGFEPDVVSYGIMINAHCSAKRYDEA 99
F+ ++SY IL+E G K + + E ++ + FE + I+ A+ A EA
Sbjct: 98 FEHSLESYHILVEILGCSKQFALLWDFLIEAREYNYFEITSKVFWIVFRAYSRANLPSEA 157
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
F M KP L++ L K ++ A +FF ++K G P A TY+ +V
Sbjct: 158 SRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRG 217
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+ + A ++ DEM + + Y+ +L L K+G + AY +F+ M G +P
Sbjct: 218 WARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMG-NLGLKP 276
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
++ I + +C + V A ++ D MK ++P ++ ++ +I +LC +K+DDA
Sbjct: 277 DAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM+ G P ++++ D A L ++D+ + P
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 170/341 (49%), Gaps = 17/341 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N +ID +CK VE A+ +F++MK R PD +Y +++G+G+ L
Sbjct: 125 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 184
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EMKD EPDV++Y +IN C + +E +REM+ KP+ + TL++
Sbjct: 185 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 244
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + +A++F+ ++ G P TY +++ A C ++DA+R+ +EM + G+ N
Sbjct: 245 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 304
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L A R +EA +F +M G P +++Y ++ F +D A+ +
Sbjct: 305 VVTYTALIDGLCDAERMKEAEELFGKMD-TAGVIPNLASYNALIHGFVKAKNMDRALELL 363
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+E+K RG+ P + +Y T I LC +K++ A EM + GI+ +++ L A
Sbjct: 364 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 423
Query: 305 G----------------MEETAVVLAQKIDKLRKTPLVDRG 329
G +E T V ID L K LV +
Sbjct: 424 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 464
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L L +E A + F KMK+ R P +S LL + + + +++M
Sbjct: 63 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 122
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P V +Y IMI+ C + A LF EM+ P + ++I+G G RL
Sbjct: 123 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 182
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + FF + K EP+ TYNA++ +C ++ EM+ G+ PN +Y ++
Sbjct: 183 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 242
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G ++A + M R+ G P TY ++ C + A R+ +EM GV
Sbjct: 243 DAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 301
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+ LI+ LC +++ +A + F +M G+ P
Sbjct: 302 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 338
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 147/355 (41%), Gaps = 70/355 (19%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + ++ L+D CK +++A + + M++ P+ +YT L++ + NL
Sbjct: 230 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 289
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM G E +VV+Y +I+ C A+R EA ELF +M+ P+ + LI+G
Sbjct: 290 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 349
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + AL+ + K RG +P+ Y + C +I A +M+EM++CGI N
Sbjct: 350 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 409
Query: 185 TRTYDIVLHHLIKAGRTEE-----------------------------------AYSVFK 209
+ Y ++ K+G E A F
Sbjct: 410 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 469
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV-------------- 255
R+S G + + + ++ C + QV+ A ++++M +G++P
Sbjct: 470 RISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 529
Query: 256 ---------------------MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y++L+ L H ++L A + +EM+ GI P
Sbjct: 530 GNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 584
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 145/301 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK ++ A + ++M + + ++ +YT L++G +
Sbjct: 261 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 320
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ +M G P++ SY +I+ AK D A+EL E++ KP ++ T
Sbjct: 321 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 380
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I GL S +++ A + K+ G + + Y ++ AY S + ++DEM++
Sbjct: 381 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 440
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I T+ +++ L K +A F R+S G + + + ++ C + QV+ A
Sbjct: 441 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 500
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++M +G++P Y++L++ + + +A +M +IG++ +++L
Sbjct: 501 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 560
Query: 301 L 301
L
Sbjct: 561 L 561
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 117/280 (41%), Gaps = 51/280 (18%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN---------------CKPSP 115
M +GF+ V SY I+ + A+ Y +A + +EM + C P
Sbjct: 1 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 60
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKK-------------------------------- 143
+F L + L L EA+Q F + K+
Sbjct: 61 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120
Query: 144 ---RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
G P TYN ++ C + A + +EM+ G+ P+T TY+ ++ K GR
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
++ F+ M + EP V TY ++ FC ++ + + + EMK G+ P + YS
Sbjct: 181 LDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 239
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
TL+++ C E + A K++ +M +G+ P +++L A
Sbjct: 240 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 279
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 18/254 (7%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ FGL+ F +ID LCK VE A +F++M ++ PD +YT L++G +Q N+
Sbjct: 473 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 532
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L + +M + G + D+++Y ++ + +A EM P + ++
Sbjct: 533 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 592
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+ + EA++ K + NA+ Y ++ E R +
Sbjct: 593 LKKHYELGCIDEAVELQSYLMKHQL-LTSDNDNALPNIYSDQNLVSSREHEEQETRISNL 651
Query: 182 GPN--TRTYDIVLHHLIKAGRTEEAYSVFKRMSR---KPGTEPTVSTYEIVVRMFCYNAQ 236
P Y + +H LI+ Y V ++ R ++S Y+ N+Q
Sbjct: 652 QPKLLLGIYKLAIHRLIRGESLSMGYIVHRKELRCGVWSQVRRSLSPYD--------NSQ 703
Query: 237 VDMAMRIWDEMKAR 250
V RI +EM AR
Sbjct: 704 V----RIQEEMGAR 713
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 89/205 (43%), Gaps = 1/205 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K + L+D KS + + D+MK+ + + ++ +L++G + K
Sbjct: 401 MKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL 460
Query: 61 LLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + + + +D G + + + MI+ C + + A LF +M P +
Sbjct: 461 VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 520
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+L++G + + EAL + + G + + Y ++V ++ A ++EM
Sbjct: 521 SLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 580
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEA 204
GI P+ VL + G +EA
Sbjct: 581 GIHPDEVLCISVLKKHYELGCIDEA 605
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 163/330 (49%), Gaps = 9/330 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + N LI++ C V A V K+ K PD ++T L+ G +
Sbjct: 82 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 141
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M D+GF+P+VV+YG +IN C A+ L R ME NC+P I+ +
Sbjct: 142 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 201
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++++EA F Q +G P+ TY ++V A C ++++M
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 261
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + V+ L K G+ EA+ + M ++ G EP V TY ++ C +++D A
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR-GVEPDVVTYTTLMDGHCLQSEMDEA 320
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M +G P + Y+TLIN C K+D A F+EM P + ++ L
Sbjct: 321 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHG 380
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L G + A+ L + +V RGQ
Sbjct: 381 LCHVGRLQDAIALFHE--------MVARGQ 402
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 157/311 (50%), Gaps = 4/311 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD F+ ++D LCK V A E+ D M +R +PD+ +YT L++G Q + +
Sbjct: 263 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 322
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ M GF PDV+SY +IN +C + D+A+ LF EM P + TL++GL
Sbjct: 323 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLC 382
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL +A+ F + RG P+ TY+ ++ + C + + +A ++ + + P+ +
Sbjct: 383 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQ 442
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y+I++ + +AG E A +F +S K G P+V TY I++ C ++ A +++ E
Sbjct: 443 VYNIIIDGMCRAGELEAARDLFSNLSSK-GLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M P Y+T+ ++ A + +EML G + L + L D+G+
Sbjct: 502 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGL 561
Query: 307 EETAVVLAQKI 317
++++ L +
Sbjct: 562 DQSSCFLMLSV 572
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 157/318 (49%), Gaps = 1/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ + ++ + +ID+LCK R V A +F +M + PDI +YT L+
Sbjct: 187 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 246
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + PDVV + +++A C + EA E+ M +P + T
Sbjct: 247 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 306
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + + EA++ F ++GF P+ +Y ++ YC +I+ A + +EM +
Sbjct: 307 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 366
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T+TY+ ++H L GR ++A ++F M + G P + TY I++ C N ++ A
Sbjct: 367 WIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVAR-GQMPDLVTYSILLDSLCKNCHLEEA 425
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + ++A + P + +Y+ +I+ +C +L+ A F + G+ P ++ +
Sbjct: 426 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 485
Query: 301 LRDEGMEETAVVLAQKID 318
L G+ A L ++D
Sbjct: 486 LCKRGLLNEANKLFMEMD 503
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 4/279 (1%)
Query: 22 KSRH---VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
KS H ++ A F+++ P I + LL + K+ ++ + +M G P
Sbjct: 30 KSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPP 89
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
+V + I+IN+ C R A + ++ +P P F TLI GL E ++ EAL F
Sbjct: 90 NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 149
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+ GF+P TY ++ C + A R++ M + P+ Y ++ L K
Sbjct: 150 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 209
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
+ EA+++F +M + G P + TY +V C + + ++M +LP + +
Sbjct: 210 RQVTEAFNLFSQMVGQ-GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 268
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ST++++LC E K+ +A + M+ G+ P ++ L
Sbjct: 269 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 307
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + LI+ CK +++A +F++M ++ + PD K+Y L+ G
Sbjct: 327 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGR 386
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM G PD+V+Y I++++ C +EA+ L + +EA+N P ++
Sbjct: 387 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNI 446
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G+ L A F +G P TYN ++ C +N+A ++ EM
Sbjct: 447 IIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 506
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
P+ TY+ + ++ T A + + M + G VST ++V M
Sbjct: 507 CSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR-GFSADVSTTTLLVEML 556
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 172/345 (49%), Gaps = 36/345 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----- 55
M K GL+ L FN L+ LC + A ++FD+M K +PD+ +Y+ ++ G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 56 --------------GQQKNLLSMNEV----------------YREMKDDGFEPDVVSYGI 85
G + N+++ N + + EM +G PDV +Y
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+++ C+ R +EA LF++M N P+ F LI+GL ++ +SEA F ++G
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
EP+ TYNA+V YC ++++A ++ + M + G PN R+Y+I+++ K+GR +EA
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ MS K T P + TY ++R FC + A + EM + G+LP + YS +++
Sbjct: 241 GLLAEMSHKSLT-PDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
LC LD+A + + M + I P +++ L + + G E A
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAA 344
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 163/352 (46%), Gaps = 36/352 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSY------------ 48
M++ G K + +N +ID+LCK R V A + F +M K PD+ +Y
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 49 -----------------------TILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
TIL++G +++ + V+ M + G EPDV +Y
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+++ +CS + DEA +LF M+ C P+ + LING R+ EA + +
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ TY+ ++ +C R +A ++ EM G+ PN TY IVL L K G +EA+
Sbjct: 251 LTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAF 310
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ K M ++ EP + Y I++ C +++ A ++ + +G+ P + Y+ +I+
Sbjct: 311 ELLKAM-QESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISG 369
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
L ++AC+ F+EM G P ++ + Q G AV L +++
Sbjct: 370 LLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 1/285 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F LID LCK R + A VF+ M ++ +PD+ +Y L++G+ + + +++ M
Sbjct: 153 FTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMD 212
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V SY I+IN HC + R DEA L EM + P + TL+ G R
Sbjct: 213 RKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQ 272
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + G P TY+ V+ C +++A+ ++ M++ I PN Y I++
Sbjct: 273 EAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILI 332
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G+ E A +F + K G +PTV TY +++ + A ++ EM G
Sbjct: 333 EGMCTFGKLEAARELFSNLFVK-GIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGC 391
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
LP Y+ +I +A + +EM+ G F L
Sbjct: 392 LPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 1/251 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ ++ +N L+D C ++ AQ++F+ M ++ P+++SY IL+ G +
Sbjct: 176 MTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGR 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM PD+ +Y ++ C R EA EL +EM + P+ +
Sbjct: 236 IDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSI 295
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL L EA + ++ EP Y ++ C ++ A + + G
Sbjct: 296 VLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG 355
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY +++ L+K G + EA +F+ M+ G P TY ++++ F N A
Sbjct: 356 IQPTVVTYTVMISGLLKGGLSNEACELFREMAVN-GCLPNSCTYNVIIQGFLRNGDTPNA 414
Query: 241 MRIWDEMKARG 251
+R+ +EM +G
Sbjct: 415 VRLIEEMVGKG 425
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 1/227 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ G + +N LI+ CKS ++ A+ + +M + PDI +Y+ L+ G+ Q
Sbjct: 211 MDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGR 270
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ +EM G P++++Y I+++ C DEA EL + M+ + +P+ I+
Sbjct: 271 PQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTI 330
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G+ + +L A + F +G +P TY ++ N+A + EM G
Sbjct: 331 LIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNG 390
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
PN+ TY++++ ++ G T A + + M K G ST+ ++
Sbjct: 391 CLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK-GFSADSSTFRML 436
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 1/304 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID L K ++ A E+ ++M +RF+P++ +YTIL+ G+ +Q L E+ M
Sbjct: 380 FNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMS 439
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + V Y +I A C +EA++LF EM CKP + F +LINGL ++
Sbjct: 440 AKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKME 499
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL + G TYN +V A+ I A++++DEM G + TY+ ++
Sbjct: 500 EALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLI 559
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K G E+ +F+ M K G PT+ + I++ C +V+ A++ +M RG+
Sbjct: 560 KALCKTGAVEKGLGLFEEMLGK-GIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGL 618
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y++LIN LC + +A F ++ GIRP ++ L EGM A +
Sbjct: 619 TPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACL 678
Query: 313 LAQK 316
L K
Sbjct: 679 LLYK 682
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 143/302 (47%), Gaps = 6/302 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + LI LC++ V A ++ + M +PD++++ ++ G +
Sbjct: 231 MAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGR 290
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M GF D ++YG +++ C + DEA L ++ P+ ++ T
Sbjct: 291 IHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNT 346
Query: 121 LINGLGSEKRLSEALQ-FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI+G + R EA + G+EP+A T+N ++ + A +++EM
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
PN TY I+++ K GR EEA + MS K + TV Y ++ C + ++
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG-YNCLICALCKDGNIEE 465
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A++++ EM +G P ++ +++LIN LC K+++A + +M G+ ++ L
Sbjct: 466 ALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVH 525
Query: 300 AL 301
A
Sbjct: 526 AF 527
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 150/345 (43%), Gaps = 37/345 (10%)
Query: 1 MDKFGLKQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D +G+ P F N ++D L A VF M R P + ++ ++++
Sbjct: 158 LDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCM 217
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ S + R+M G P+ V Y +I+A C R EA++L +M C+P
Sbjct: 218 VSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQT 277
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT------------------------- 152
F +I+GL R+ EA + + RGF +A T
Sbjct: 278 FNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP 337
Query: 153 ------YNAVVGAYCWSMRINDAYRMM-DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
YN ++ Y S R +A ++ + M G P+ T++I++ L+K G A
Sbjct: 338 NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSAL 397
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ M K EP V TY I++ FC +++ A I + M A+G+ Y+ LI +
Sbjct: 398 ELLNEMVAKR-FEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICA 456
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEET 309
LC + +++A + F EM G +P F++L L ++ MEE
Sbjct: 457 LCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEA 501
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 131/303 (43%), Gaps = 31/303 (10%)
Query: 42 DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
DP KSY ++L+ V+ +M G P V ++G+++ A C D A
Sbjct: 167 DPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACS 226
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L R+M C P+ I+ TLI+ L R+SEALQ EP+ T+N V+ C
Sbjct: 227 LLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLC 286
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK------- 214
+ RI++A +++D M G + TY ++H L + G+ +EA ++ ++
Sbjct: 287 RAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNT 346
Query: 215 ------------------------PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
G EP T+ I++ + A+ + +EM A+
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P + Y+ LIN C + +L++A + M G+ ++ L AL +G E A
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466
Query: 311 VVL 313
+ L
Sbjct: 467 LQL 469
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL +N LI LCK ++E A ++F +M + PDI ++ L+ G +
Sbjct: 438 MSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHK 497
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +Y +M +G + V+Y +++A +A +L EM C +
Sbjct: 498 MEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNG 557
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + + L F + +G P + N ++ C + ++NDA + + +M G
Sbjct: 558 LIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG 617
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ +++ L K G +EA ++F ++ + G P TY ++ C+ + A
Sbjct: 618 LTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSE-GIRPDAITYNTLISRHCHEGMFNDA 676
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN 264
+ + G +P +S LIN
Sbjct: 677 CLLLYKGVDSGFIPNEVTWSILIN 700
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 35/232 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----- 55
M G K ++ FN LI+ LCK+ +E A ++ M + +Y L+ +
Sbjct: 473 MSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDS 532
Query: 56 ------------------------GQQKNLLSMNEV------YREMKDDGFEPDVVSYGI 85
G K L V + EM G P ++S I
Sbjct: 533 IQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNI 592
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ C + ++A++ ++M P + +LINGL + EA F + + G
Sbjct: 593 LISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG 652
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
P+A TYN ++ +C NDA ++ + G PN T+ I++++++K
Sbjct: 653 IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Query: 99 AVELFREMEATNCKPSPHIF--C-TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
++ELF+ A K H F C LI+ LG+ + Q K G + +
Sbjct: 82 SMELFQRAGAQ--KGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFIL 139
Query: 156 VVGAYCWSMRINDAYRMMDEMRKC-GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ Y + A R++ +M P ++Y++VL L+ A +VF M +
Sbjct: 140 IMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSR 199
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G PTV T+ +V++ C ++VD A + +M G +P +Y TLI++LC +++ +
Sbjct: 200 -GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSE 258
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVL 313
A + ++M + P Q F+++ L G + E A +L
Sbjct: 259 ALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLL 298
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 9/175 (5%)
Query: 147 EPEAPTYNAV----VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+P +YN V V C + N Y M+ G+ P T+ +V+ L +
Sbjct: 167 DPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSR----GVSPTVYTFGVVMKALCMVSEVD 222
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
A S+ + M+ K G P Y+ ++ C N +V A+++ ++M P + ++ +
Sbjct: 223 SACSLLRDMA-KHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDV 281
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
I+ LC ++ +A K ML G + L L G + A L KI
Sbjct: 282 IHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI 336
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 171/347 (49%), Gaps = 35/347 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + LI CKSR V R E+ ++ +R F PDI +Y+ +++G + L
Sbjct: 174 GCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 233
Query: 65 NEVYREMK--------------------------------DDGFEPDVVSYGIMINAHCS 92
+++ EM DD PDVV+Y +++A C
Sbjct: 234 VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCK 293
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
R D+A ELF++M A P F +L++GL E R+ +AL+ + +RG P T
Sbjct: 294 MGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYT 353
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
YN VV YC + ++ A ++ + R G PNT TY+I++ +AGRT++A +++
Sbjct: 354 YNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLN 413
Query: 213 RKPGTEPT-VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ G PT V+ Y I++ C + + D A++ ++EM RG +P ++T++ +LC +
Sbjct: 414 SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQ 473
Query: 272 LDDACKYFQEMLDIGIRP-PGQLFSNLKQALRDEGMEETAVVLAQKI 317
A + +EM+ G P PG + + R GM + A LA ++
Sbjct: 474 PQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR-AGMIQKADELASEL 519
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 155/319 (48%), Gaps = 7/319 (2%)
Query: 11 PDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PDF +L+ L K+R + A +V +M R PD + T++++ + E+
Sbjct: 37 PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 96
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
EM G + ++Y +++ C +R DEAV L M C P+ + ++I G
Sbjct: 97 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+R+ EA F Q G P+ TY A++G +C S + ++ E+ + G P+ T
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT 216
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y V+ L KAGR +A +F+ MS PT TY ++ +C +D A+R+ +M
Sbjct: 217 YSTVIDGLCKAGRLRDAVDIFEEMS----CAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
P + Y+TL+++ C +LDDA + FQ+M+ + P F++L L EG
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332
Query: 308 ETAVVLAQKIDKLRKTPLV 326
E A+ L ++I + P +
Sbjct: 333 EDALELLEEITRRGCPPTI 351
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 170/361 (47%), Gaps = 41/361 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N +I C++R V+ A ++M PDI +YT L+ G+ + ++
Sbjct: 135 MAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRD 194
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ E+ GF PD+V+Y +I+ C A R +AV++F EM +C P+ + +
Sbjct: 195 VGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNS 251
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + EA++ G+ P+ TY ++ A+C R++DAY + +M
Sbjct: 252 LIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK 311
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ ++ L GR E+A + + ++R+ G PT+ TY VV +C QV A
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR-GCPPTIYTYNCVVDGYCKANQVRKA 370
Query: 241 MRIWDEMKARGVLP-------------------------------------VMHMYSTLI 263
+ + ++RG +P + MY+ ++
Sbjct: 371 EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 430
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
++LC + + DDA ++++EM+ G P F+ + AL + A L +++ K T
Sbjct: 431 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 490
Query: 324 P 324
P
Sbjct: 491 P 491
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAV 100
+P + +++ G + L VYR+M +D PD ++Y +++ A+R +AV
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAV 59
Query: 101 ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
++ +EM + P ++ L R+ +A + + RG A TY+A+V
Sbjct: 60 QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C R+++A +++ M + G P TY+ ++ +A R +EA+ ++M + G P
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAE-GCHPD 178
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
+ TY ++ FC + V + + E+ RG P + YST+I+ LC +L DA F+
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238
Query: 281 EMLDIGIRPPGQLFSNLKQA-LRDEGMEETAVVLAQKID 318
EM P +++L R M+E +L + +D
Sbjct: 239 EM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L ++ F L+D LC +E A E+ +++ +R P I +Y +++G+ + +
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAE 371
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIFCTLIN 123
E+ + + GF P+ V+Y I++ C A R D+A++ ++ E C S ++ +++
Sbjct: 372 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 431
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTY------------------------------ 153
L + R +A+QF+ + +RG+ P A T+
Sbjct: 432 ALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 491
Query: 154 -----NAVVGAYCWSMRINDAYRMMDEMR 177
+AVV AYC + I A + E+R
Sbjct: 492 GPGTCDAVVSAYCRAGMIQKADELASELR 520
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P T +++V+ L +AGR A V+++M+ P TY +V ++ A
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN--DAHPPDFLTYTKLVHGLSKARRLRDA 58
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ EM + +P + ++ SLC D++DDA + +EML G+ +S L
Sbjct: 59 VQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118
Query: 301 L-RDEGMEETAVVLAQKIDKLRKTPLV 326
L + E ++E AV L + + + P V
Sbjct: 119 LCKCERLDE-AVALVETMAERGCAPTV 144
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 159/317 (50%), Gaps = 8/317 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + +N LID LCK+ +RAQE+F+ MK P + +Y LL+G +
Sbjct: 105 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 164
Query: 61 LLSMNEVYREM-------KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
L +++EM DD P+V++Y ++I+ C A R +AVEL M+A C P
Sbjct: 165 LERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSP 224
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ L++GL E +++ A + + G P TYN+++ C + R++DA +M
Sbjct: 225 DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM 284
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+M G PN TY ++ L K GR ++A ++ M K GT P + Y +++ C
Sbjct: 285 RDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT-PDLMIYNMLINGLCK 343
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
QVD ++ + + G+ P + YS++I LC ++LD+AC+ + G P L
Sbjct: 344 ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVIL 403
Query: 294 FSNLKQALRDEGMEETA 310
+S L L G + A
Sbjct: 404 YSTLIDGLCKAGKVDEA 420
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 162/312 (51%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID LCK+ V +A E+ + MK R PD+ +YTIL++G ++ + + EV REM
Sbjct: 194 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 253
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G P++V+Y +++ C A+R +A+ L R+M C P+ + TLI+GL R+
Sbjct: 254 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 313
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A +G P+ YN ++ C + +++++ ++ GI P+ TY V+
Sbjct: 314 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 373
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L ++ R +EA + + + G P V Y ++ C +VD A +++ M G
Sbjct: 374 YGLCRSNRLDEACRLLLYVKSR-GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ YSTLI+ LC ++D+A M+ +G P +++L + L D + A+
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492
Query: 313 LAQKIDKLRKTP 324
L +++++ P
Sbjct: 493 LVEEMERSNCAP 504
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 9/310 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LID LCK++ A F M+ D YT LL G ++K L + EM+D G
Sbjct: 50 LIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHG 109
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
EP+VV+Y +I+ C D A ELF M++ C PS + TL++GL +L A+
Sbjct: 110 CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 169
Query: 136 QFFGQSKKR-------GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
F + R P TY+ ++ C + R++ A +++ M+ G P+ TY
Sbjct: 170 ALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITY 229
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
I++ L K + A+ V + M G P + TY ++ C +V A+ + +M
Sbjct: 230 TILVDGLCKESKVAAAWEVLREM-LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMT 288
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGME 307
RG P + Y TLI+ LC ++ DAC +M+D G P +++ L L + + ++
Sbjct: 289 CRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVD 348
Query: 308 ETAVVLAQKI 317
E+ +L + +
Sbjct: 349 ESIALLRRAV 358
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 147/303 (48%), Gaps = 6/303 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LID LCK V+ A + M + PD+ Y +L+ G + +
Sbjct: 291 GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDES 350
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ R G +PDVV+Y +I C + R DEA L +++ C P ++ TLI+G
Sbjct: 351 IALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDG 410
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ EA + G + + TY+ ++ C + R+++A+ ++ M + G P+
Sbjct: 411 LCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPS 470
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+ ++ L +EA + + M R P+ TY I++ C +VD A+ +
Sbjct: 471 TMTYNSLIKGLCDLNHLDEAIELVEEMERS-NCAPSAVTYNILIHGMCRMERVDSAVVLL 529
Query: 245 DEMKAR-----GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
++ KAR G YS+LI+ LC ++ +A YFQEM+D G+ P +S L +
Sbjct: 530 EQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLE 589
Query: 300 ALR 302
L+
Sbjct: 590 GLK 592
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 131/265 (49%), Gaps = 6/265 (2%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
PD+ +Y LL G+ + + + EM+ P+V I+I+ C AKR +A+
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
FR M+ + I+ L++GL EKRL +AL + + G EP TYN+++ C
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG------ 216
+ + A + + M+ P+ TY+ +L L + G+ E A ++F+ M +
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P V TY +++ C +V A+ + + MKARG P + Y+ L++ LC E K+ A
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQAL 301
+ +EMLD G P +++L L
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGL 271
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 1/182 (0%)
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+P+ TY A++ +C I+ A R DEMR + PN I++ L KA R+ +A
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
F+ M + G Y ++ ++D A+ I EM+ G P + Y++LI+ L
Sbjct: 66 CFRAM-QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
C ++ D A + F+ M + P ++ L L G E A+ L Q++ R +
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 327 DR 328
DR
Sbjct: 185 DR 186
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
P +P V TY ++R FC ++D A R +DEM+++ ++P + + S LI+ LC + D
Sbjct: 3 PICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSID 62
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQAL----------------RDEGMEETAVVLAQKID 318
A + F+ M GI +++ L L RD G E V ID
Sbjct: 63 ALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID 122
Query: 319 KLRKTPLVDRGQ 330
L K DR Q
Sbjct: 123 GLCKNNEPDRAQ 134
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 5/138 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G +N LI LC H++ A E+ ++M++ P +Y IL+ G + +
Sbjct: 462 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 521
Query: 61 LLSMNEVYREMKD-----DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
+ S + + K G D ++Y +I+ C A R EA++ F+EM P
Sbjct: 522 VDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDH 581
Query: 116 HIFCTLINGLGSEKRLSE 133
+ L+ GL K L E
Sbjct: 582 ITYSILLEGLKKSKDLHE 599
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 170/313 (54%), Gaps = 11/313 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G + + F L+D LCK+ V+ A +F+ M+ R F P +K +T LL GW ++
Sbjct: 177 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FSPSLKHFTCLLYGWCKEGK 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL V +M++ GFEPD+V Y +++ + +A + +A +L +E+ C P+ +
Sbjct: 236 LLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYTI 295
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC-WSMRINDAYRMMDEMRKC 179
LI L ++++ EA++ F + ++ G + + TY A+V +C W M I+ Y+++ M +
Sbjct: 296 LIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRM-IDKGYQILQSMIQK 354
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS--RKPGTEPTVSTYEIVVRMFCYNAQV 237
G PN TY LH ++ + EE + M +K G P +S Y +V+R+ C +V
Sbjct: 355 GHMPNQLTY---LHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVIRLACKLGEV 411
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI---RPPGQLF 294
+ + W+EM+ G+ P + + +IN L +AC+YF+EM++ G+ R G L
Sbjct: 412 NAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERGLLSSRQYGILK 471
Query: 295 SNLKQALRDEGME 307
L LR E +E
Sbjct: 472 DLLNALLRGEKLE 484
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 3/211 (1%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ +++ S++ ++A+E+ EM C+P ++F L++ L + EA F +
Sbjct: 154 FVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR 213
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
R F P + ++ +C ++ +A ++ +MR+ G P+ Y+ +L AG+
Sbjct: 214 VR-FSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMG 272
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
+A+ + K + RK G +P ++Y I+++ C ++D AMR++ EM+ G + Y+ L
Sbjct: 273 DAFDLLKEIRRK-GCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTAL 331
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
++ C +D + Q M+ G P QL
Sbjct: 332 VSGFCKWRMIDKGYQILQSMIQKG-HMPNQL 361
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 3/202 (1%)
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
+Y MI K++ L EM N + +F ++ S + +++A++ +
Sbjct: 117 NYKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVVVMRRFASSRMVNKAIEVLDE 176
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
K G EP+ + ++ A C + + +A + ++MR P+ + + +L+ K G+
Sbjct: 177 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR-VRFSPSLKHFTCLLYGWCKEGK 235
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
EA V +M R+ G EP + Y ++ + ++ A + E++ +G P Y+
Sbjct: 236 LLEAKHVLVQM-REAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYT 294
Query: 261 TLINSLCHEDKLDDACKYFQEM 282
LI +LC ++K+D+A + F EM
Sbjct: 295 ILIQALCGQEKMDEAMRVFVEM 316
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 75/182 (41%), Gaps = 3/182 (1%)
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-CGIGPNTRTYDIVLHHL 195
F SK+ + Y A++ + + +++EMR+ + + + +V+
Sbjct: 102 FVWASKQPCYRHCYENYKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVVVMRRF 161
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ +A V M K G EP + ++ C N V A ++++M+ R P
Sbjct: 162 ASSRMVNKAIEVLDEMP-KYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FSPS 219
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ ++ L+ C E KL +A +M + G P +++NL G A L +
Sbjct: 220 LKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLK 279
Query: 316 KI 317
+I
Sbjct: 280 EI 281
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + +N +ID CK + + A M + +P++ ++ +++ G +
Sbjct: 9 MERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGR 68
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +EV EM G+ PD V+Y ++N +C + +A+ L EM P+ + +
Sbjct: 69 LKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTS 128
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN + L+ A++FF Q RG P TY ++ + +++AYR+++EM + G
Sbjct: 129 LINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ +++ GR EEA + + M K G P V +Y ++ F N ++D A
Sbjct: 189 FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGK-GVLPDVVSYSTIISGFARNQELDRA 247
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM + VLP YS+LI LC + +L +AC FQEML I + P ++ L A
Sbjct: 248 FQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINA 307
Query: 301 LRDEG 305
EG
Sbjct: 308 YCKEG 312
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 149/313 (47%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ L FN +I+ LC+ ++ EV +M ++ + PD +Y L+ G+ ++ N
Sbjct: 48 GLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQA 107
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM +G P+VV+Y +IN+ C A + A+E F +M P+ + T+ING
Sbjct: 108 LVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIING 167
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L EA + + + GF P TYNA++ +C R+ +A ++ +M G+ P+
Sbjct: 168 FAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPD 227
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y ++ + + A+ + M K P TY +++ C ++ A ++
Sbjct: 228 VVSYSTIISGFARNQELDRAFQMKVEMIGKS-VLPDAVTYSSLIQGLCEQRRLTEACDMF 286
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM + P Y+TLIN+ C E L+ A EM+ G P ++ L L +
Sbjct: 287 QEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQ 346
Query: 305 GMEETAVVLAQKI 317
+ A L K+
Sbjct: 347 ARSKEARRLLLKL 359
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 167/378 (44%), Gaps = 55/378 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LI+++CK+ ++ RA E FD+M R P+ ++YT ++ G+ QQ
Sbjct: 114 MVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGL 173
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR---------------- 104
L V EM GF P +V+Y +IN HC R +EA+ L +
Sbjct: 174 LDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYST 233
Query: 105 -------------------EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
EM + P + +LI GL ++RL+EA F +
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ TY ++ AYC +N A + DEM + G P+ TY+++++ L K R++EA
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353
Query: 206 SVFKRMSRKPGTEPTVSTYEI---------------VVRMFCYNAQVDMAMRIWDEMKAR 250
+ ++ P+ TY +V+ FC +D A ++++ M +
Sbjct: 354 RLLLKLFYDDSI-PSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINK 412
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME-ET 309
P +Y+ +I+ C + A K ++EM+ + P L +AL EGM+ E
Sbjct: 413 NHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGEL 472
Query: 310 AVVLAQKIDKLRKTPLVD 327
V+ D LR L D
Sbjct: 473 NEVIG---DILRSCKLTD 487
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
+ F+EME C P+ + T+I+G KR EA F +G EP T+N ++
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
C R+ + ++ EM + G P+ TY+ +++ K G +A + M R G
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRN-GLS 120
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V TY ++ C ++ AM +D+M RG+ P Y+T+IN + LD+A +
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
EM G P ++ L G E A+ L Q
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQ 217
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 83/230 (36%), Gaps = 53/230 (23%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK-------- 59
PD + LI+ CK + +A + D+M ++ F PD +Y +L+ G +Q
Sbjct: 296 PDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRL 355
Query: 60 ----------------NLLSMN--------------------------EVYREMKDDGFE 77
N L N +V+ M + +
Sbjct: 356 LLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHK 415
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P+ Y ++I+ HC +A +L++EM + P L+ L +E E +
Sbjct: 416 PNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEV 475
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
G + +A +V ++ + ++ EM K G+ P+T T
Sbjct: 476 IGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
M +R + EM+ G LP + Y+T+I+ C + D+A + + M G+ P F+ +
Sbjct: 1 MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60
Query: 299 QAL-RDEGMEETAVVLAQ 315
L RD ++ET+ VL +
Sbjct: 61 NGLCRDGRLKETSEVLVE 78
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 174/341 (51%), Gaps = 17/341 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ Q + +N +I +CK + A+ +F +MK+ PDI +Y L++G+G+ L
Sbjct: 247 GIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDES 306
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMKD G EPDV++Y +IN C ++ +A EM+ + KP+ + TLI+
Sbjct: 307 FCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDA 366
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E L +A++F ++ G P TY +++ A C + ++DA ++ DEM + +G N
Sbjct: 367 LCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFN 426
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L L K GR EA +F+ M K G P + TY +V N +V+ A+ +
Sbjct: 427 VVTYTTLLDGLCKEGRMMEAEDLFRAMI-KAGVTPNLKTYTALVHGHIKNKRVENALELL 485
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--------- 295
E+K + + P + +Y T+I LC ++KL++ EM GIR +++
Sbjct: 486 KEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKT 545
Query: 296 -------NLKQALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
NL Q + D G+E T V ID L K LV+
Sbjct: 546 GKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEA 586
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 144/289 (49%), Gaps = 9/289 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK+ ++ A ++ D+M + + ++ +YT LL+G ++
Sbjct: 383 MRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGR 442
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +++R M G P++ +Y +++ H KR + A+EL +E++ KP ++ T
Sbjct: 443 MMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGT 502
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL S+ +L E + K G + Y + AY + + +A ++ EM G
Sbjct: 503 IIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLG 562
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ T+ +++ L K G EEA F RM+ V+ ++ C N ++ A
Sbjct: 563 VEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAA 622
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN-SLCHEDKLDDACKYFQEMLDIGIR 288
+++DEM+ + ++P Y+ LI+ +L H+D FQE L+I R
Sbjct: 623 KKLFDEMQDKNMVPDKIAYTALIDGNLKHKD--------FQEALNIRSR 663
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPD-IKSYTILLEGWGQQK 59
M G++ + F LID LCK VE A + F +M P+ + T L++G +
Sbjct: 558 MCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNN 617
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + +++ EM+D PD ++Y +I+ + K + EA+ + M + H +
Sbjct: 618 YIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYT 677
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+L+ GL + +A F + +G P+ ++ Y I++A + DE+ K
Sbjct: 678 SLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLK 736
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 88/238 (36%), Gaps = 36/238 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I LC +E + V +MK + YTI ++ + + + + +EM
Sbjct: 500 YGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMC 559
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVE------------------------------- 101
D G E +V++ ++I+ C +EA++
Sbjct: 560 DLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYI 619
Query: 102 -----LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
LF EM+ N P + LI+G K EAL + + G E + Y ++
Sbjct: 620 EAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSL 679
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
V + A ++EM GI P+ +L + G +EA + + +K
Sbjct: 680 VWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 35/156 (22%)
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR-------------- 213
D + ++ R + P +D + I+ G EEA F RM+R
Sbjct: 166 DVFEVLWSTRNVCV-PGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFL 224
Query: 214 --------------------KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
G +V TY I++ C + A ++ +MK G+
Sbjct: 225 YRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLT 284
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + Y++LI+ LD++ F+EM D+G P
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEP 320
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 2/311 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
F + L N L+ L K VE +VFD M + PD+ +YT ++ + N+
Sbjct: 174 FEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKD 233
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V EM + G P++V+Y ++I C A+ DEA+EL R M P + + LIN
Sbjct: 234 AKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILIN 293
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G EKR EA + G +PE TYNA++ + I A+R+ DEM CGI
Sbjct: 294 GFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEA 353
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N ++ +L+ + KAG+ E+A + + M K G EP TY +++ C + A +
Sbjct: 354 NLIIWNTLLNGVCKAGKMEKALEIMQEMMEK-GVEPDSQTYSLLIEGHCRGQNMARAFEL 412
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
DEMK R + P + YS +IN LC L +EM+ G++P +++ L A
Sbjct: 413 LDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAK 472
Query: 304 EG-MEETAVVL 313
EG +EE+ ++L
Sbjct: 473 EGRVEESRMIL 483
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ LI+ C+ +++ RA E+ D+MKKR+ P + +Y++++ G + NL
Sbjct: 385 GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGT 444
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N + REM +G +P+ V Y ++ AH R +E+ + M P + +LI G
Sbjct: 445 NAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIG 504
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
KR+ EA + + +R P A TY A + Y + + A R +EM CG+ PN
Sbjct: 505 FCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 564
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFK-RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
Y ++ K G EA+SVF+ +SR+ V TY +++ N ++ A I
Sbjct: 565 VGIYTALIEGHCKEGNVTEAFSVFRFILSRR--VLQDVQTYSVLIHGLSRNGKMHEAFGI 622
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ E++ +G+LP Y++LI+ C + +D A + +EM GI P ++ L L
Sbjct: 623 FSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 682
Query: 304 EGMEETAVVLAQKIDKLRKTP 324
G E A L I+ TP
Sbjct: 683 AGEIERAKNLFDDIEGRGLTP 703
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 156/313 (49%), Gaps = 4/313 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N LI CK++ +E A+ +M +RR P+ +Y ++G+ + + +
Sbjct: 492 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 551
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM G P+V Y +I HC EA +FR + + + LI+GL
Sbjct: 552 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS 611
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ EA F + +++G P A TYN+++ C ++ A ++++EM GI P+
Sbjct: 612 RNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIV 671
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+I++ L KAG E A ++F + + G P TY +V +C + A ++ +E
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDIEGR-GLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 730
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M RGV P +Y+ ++N C E+K + A FQEML+ G + ++ + +
Sbjct: 731 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKL 790
Query: 307 EETAVVLAQKIDK 319
+E +L + I+K
Sbjct: 791 QEANHLLEEMIEK 803
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 158/310 (50%), Gaps = 3/310 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N LID LCK+ +ERA+ +FD ++ R P+ +Y +++G+ + KN +
Sbjct: 665 GINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA 724
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G PD Y +++N C +++++A++LF+EM + F TLI G
Sbjct: 725 FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEG 783
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L EA + ++ F P TY +++ C + + +A R+ EM++ + P
Sbjct: 784 YCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPT 843
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+TY +LH G E ++F+ M K G EP TY +++ +C V A ++
Sbjct: 844 AKTYTSLLHGYHNIGNMSEVSALFEEMVAK-GIEPDKMTYYVMIDAYCREGNVMEACKLK 902
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DE+ +G+ + Y LI +LC +++ + K E+ + G R S + + +
Sbjct: 903 DEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIA 962
Query: 305 G-MEETAVVL 313
G M+E A VL
Sbjct: 963 GNMDEAAEVL 972
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 153/310 (49%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L +N +I LC++R ++ A E+ M + PD+ +Y IL+ G+ +K
Sbjct: 241 MGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKR 300
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM D G +P+ ++Y +I+ ++A + EM A + + I+ T
Sbjct: 301 SREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNT 360
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG+ ++ +AL+ + ++G EP++ TY+ ++ +C + A+ ++DEM+K
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 420
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY ++++ L + G + ++ + M G +P Y ++ +V+ +
Sbjct: 421 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMN-GLKPNAVVYTTLMTAHAKEGRVEES 479
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I + M+ +G+LP + Y++LI C ++++A Y EML+ +RP +
Sbjct: 480 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539
Query: 301 LRDEGMEETA 310
G E A
Sbjct: 540 YSKAGEMEIA 549
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 152/309 (49%), Gaps = 11/309 (3%)
Query: 2 DKFGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ FG+ EL + +N LI CK +V++A ++ ++M + +PDI +Y IL+
Sbjct: 618 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 677
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+G + + ++ +++ G P+ V+Y M++ +C +K A +L EM
Sbjct: 678 DGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP 737
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P I+ ++N E++ +AL F + ++GF ++N ++ YC S ++ +A +
Sbjct: 738 PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHL 796
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
++EM + PN TY ++ H KAG EA ++ M + PT TY ++ +
Sbjct: 797 LEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER-NVMPTAKTYTSLLHGYH 855
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+ +++EM A+G+ P Y +I++ C E + +ACK E+L G+
Sbjct: 856 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVA 915
Query: 293 LFSNLKQAL 301
+ L QAL
Sbjct: 916 AYDALIQAL 924
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 137/282 (48%), Gaps = 2/282 (0%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
Q++ ++ LI L ++ + A +F +++++ P+ +Y L+ G +Q N+ +++
Sbjct: 598 QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQL 657
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
EM G PD+V+Y I+I+ C A + A LF ++E P+ + +++G
Sbjct: 658 LEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCK 717
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
K + A Q + RG P+A YN ++ C + A + EM + G +T +
Sbjct: 718 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVS 776
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++ ++ K+G+ +EA + + M K P TY ++ C + A R+W EM
Sbjct: 777 FNTLIEGYCKSGKLQEANHLLEEMIEKQFI-PNHVTYTSLIDHNCKAGMMGEAKRLWLEM 835
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ R V+P Y++L++ + + + F+EM+ GI P
Sbjct: 836 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP 877
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 6/241 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ CK E+A ++F +M ++ F + S+ L+EG+ + L N + EM
Sbjct: 743 YNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMI 801
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ F P+ V+Y +I+ +C A EA L+ EM+ N P+ + +L++G + +S
Sbjct: 802 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 861
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E F + +G EP+ TY ++ AYC + +A ++ DE+ G+ + YD ++
Sbjct: 862 EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALI 921
Query: 193 HHLIKAGRTEEAYSVFKRMSR--KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
L K EE + V K ++ + G + T ++ R F +D A + M
Sbjct: 922 QALCK---KEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKF 978
Query: 251 G 251
G
Sbjct: 979 G 979
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 36/285 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L+D+ K + A VF K F P + S LL + + +V+ M
Sbjct: 148 FDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMC 207
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDV +Y MI+AHC +A + EM
Sbjct: 208 AHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEM-------------------------- 241
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
++G P TYN ++G C + +++A + M G+ P+ TYDI++
Sbjct: 242 ---------GEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILI 292
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ R+ EA + M G +P TY ++ F ++ A RI DEM A G+
Sbjct: 293 NGFCMEKRSREAKLMLLEMI-DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGI 351
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ +++TL+N +C K++ A + QEM++ G+ P Q +S L
Sbjct: 352 EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 396
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
KQ +P+ + LID CK+ + A+ ++ +M++R P K+YT LL G+ N+
Sbjct: 803 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 862
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ ++ EM G EPD ++Y +MI+A+C EA +L E+ S + LI
Sbjct: 863 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQ 922
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L ++ E L+ + + GF PT + + + + +++A ++ M K G
Sbjct: 923 ALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVS 982
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
NT + ++ +E++ ++ K+M+
Sbjct: 983 NTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 130/320 (40%), Gaps = 26/320 (8%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY--- 68
D R I TL S + + E D KK + DI IL G K LL N Y
Sbjct: 25 DSVREITTLLNSHNWQALMESSDIPKK--LNTDIIRSVILQNQVGDPKRLL--NFFYWSQ 80
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------------------EATN 110
+M + D+ + C++ Y A +L + + + N
Sbjct: 81 HKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCN 140
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
P+ IF L++ L EA+ F K F P + N+++G ++ +
Sbjct: 141 GSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 200
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++ D M + P+ TY ++ K G ++A V M K G P + TY +++
Sbjct: 201 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEK-GCSPNLVTYNVIIGG 259
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C +D A+ + M +G++P ++ Y LIN C E + +A EM+D+G++P
Sbjct: 260 LCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 319
Query: 291 GQLFSNLKQALRDEGMEETA 310
++ L +G E A
Sbjct: 320 PITYNALIDGFMRQGDIEQA 339
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 169/330 (51%), Gaps = 11/330 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ + K + F+ LI LC+ R +AQE FD +K + F+PD+ YT L+ GW + N
Sbjct: 155 MEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 213
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ EMK G +P+V +Y I+I++ C + A ++F EM C+P+ + +
Sbjct: 214 ISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNS 273
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ R + LQ + Q K+ G EP+ TYN ++ +C + DA +++ M K G
Sbjct: 274 LMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKG 333
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T++ + + K G A+ ++K+M ++ E TY +++MF + DM
Sbjct: 334 CAPNASTFNTLFGCIAKLGDVNAAHRMYKKM-KELNCEANTVTYNTLMKMFVASKSTDMV 392
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD-IGIRPPGQLFSNLKQ 299
+++ EM + P ++ Y LI C ++A K+F+EM+D +RP ++ + Q
Sbjct: 393 LKLKTEMDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQ 452
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
LR G + L +K +VDRG
Sbjct: 453 QLRKAGQLKKHEELVEK--------MVDRG 474
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 123/250 (49%), Gaps = 2/250 (0%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
MK + V ++ I++ + A EA+ F ME NCKP F LI+ L E+R
Sbjct: 120 MKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERR 179
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
S+A +FF S K FEP+ Y +V +C + I++A R+ EM+ GI PN TY I
Sbjct: 180 ASQAQEFF-DSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSI 238
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
V+ L + G+ A+ +F M G +P TY ++R+ + + ++++++MK
Sbjct: 239 VIDSLCRCGQITRAHDIFAEM-LDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRL 297
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G P Y+ LI + C ++ L+DA K M G P F+ L + G A
Sbjct: 298 GCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNTLFGCIAKLGDVNAA 357
Query: 311 VVLAQKIDKL 320
+ +K+ +L
Sbjct: 358 HRMYKKMKEL 367
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 152/323 (47%), Gaps = 2/323 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N ++D + + A D MK R D ++++ IL+ + +
Sbjct: 89 GFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMRRYVRAGLAAEA 148
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M+D +PD +++ I+I+ C +R +A E F ++ +P ++ L+ G
Sbjct: 149 IHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLK-DKFEPDVIVYTNLVRG 207
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+SEA + FG+ K G +P TY+ V+ + C +I A+ + EM G PN
Sbjct: 208 WCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPN 267
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY+ ++ +KAGRTE+ V+ +M R G EP TY ++ C + ++ A+++
Sbjct: 268 SITYNSLMRIHVKAGRTEKVLQVYNQMKRL-GCEPDTVTYNFLIETHCKDENLEDAIKVI 326
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M +G P ++TL + ++ A + +++M ++ ++ L +
Sbjct: 327 GLMAKKGCAPNASTFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVAS 386
Query: 305 GMEETAVVLAQKIDKLRKTPLVD 327
+ + L ++D+ + P V+
Sbjct: 387 KSTDMVLKLKTEMDENKIEPNVN 409
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 34/228 (14%)
Query: 131 LSEALQFFG-QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ + L FF S + GF YN +V M + A+ +D M+ + T+
Sbjct: 74 VPQVLAFFNWASNQDGFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFL 133
Query: 190 IVLHHLIKAGRTEEAYSVFKRM---------------------------------SRKPG 216
I++ ++AG EA F RM S K
Sbjct: 134 ILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDK 193
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
EP V Y +VR +C + A R++ EMK G+ P ++ YS +I+SLC ++ A
Sbjct: 194 FEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAH 253
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F EMLD G +P +++L + G E + + ++ +L P
Sbjct: 254 DIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEP 301
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 170/316 (53%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+ K + N L+D+L +++ + AQ +FDK+K+R F P++ +YT+LL GW + +N
Sbjct: 264 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRN 322
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++ +M D G +PD+V++ +M+ +++ +A++LF M++ P+ +
Sbjct: 323 LIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTI 382
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I + + A+++F G +P+A Y ++ + +++ Y ++ EM++ G
Sbjct: 383 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 442
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +TY+ ++ + E A ++ +M + EP++ T+ ++++ + +M
Sbjct: 443 HPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNE-IEPSIHTFNMIMKSYFMARNYEMG 501
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+WDEM +G+ P + Y+ LI L E K +AC+Y +EMLD G++ P ++
Sbjct: 502 SAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 561
Query: 301 LRDEGMEETAVVLAQK 316
G E LAQ+
Sbjct: 562 FHKGGQPEIFEELAQR 577
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 138/281 (49%), Gaps = 3/281 (1%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
+K+ F D ++Y ++ + + +M V EM G + ++ I + A +AK
Sbjct: 196 EKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKER 254
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+AV +F M+ K L++ LG K EA F + K+R F P TY +
Sbjct: 255 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVL 313
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ +C + +A R+ ++M G+ P+ ++++L L+++ + +A +F M K G
Sbjct: 314 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSK-G 372
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P V +Y I++R FC + ++ A+ +D+M G+ P +Y+ LI + KLD
Sbjct: 373 PCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 432
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ +EM + G P G+ ++ L + + ++ M E A + K+
Sbjct: 433 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM 473
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/233 (18%), Positives = 90/233 (38%), Gaps = 70/233 (30%)
Query: 134 ALQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A +FF ++K+GF ++ TYN+++ + + +++EM G+ T+ I +
Sbjct: 187 AFRFFCWAAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM 245
Query: 193 HHLIKAGRTEEAYSVFKRMSR---KPGTE------------------------------P 219
A ++A +F+ M + K G E P
Sbjct: 246 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTP 305
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDE--------------------------------- 246
+ TY +++ +C + A RIW++
Sbjct: 306 NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLF 365
Query: 247 --MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
MK++G P + Y+ +I C + ++ A +YF +M+D G++P +++ L
Sbjct: 366 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 418
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 150/282 (53%), Gaps = 1/282 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ FN L++ CK ++ + VFD M K+ P+ +Y L++G+ K +
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ M G PD+ SY IMIN C K++DEA+ LF+EM N P + +LI+GL
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+S ALQ Q RG P TYN+++ A C + +++ A ++ + + G P+
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDI 470
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY I++ L ++G+ E+A VF+ + K G V Y I+++ FC + A+ +
Sbjct: 471 STYSILIKGLCQSGKLEDARKVFEDLLVK-GYNLDVYAYTIMIQGFCVEGLFNEALALLS 529
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+M+ G +P Y +I SL +D+ D A K +EM+ G+
Sbjct: 530 KMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 149/298 (50%), Gaps = 1/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LCK A ++ ++ P++ Y +++ + K + +++ EM
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMV 252
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDVV+Y +I+ C + +A++LF +M N KP + F L+N + ++
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E F K+G +P TYN+++ YC +N A + + M + G+ P+ ++Y I++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K + +EA ++FK M RK P V TY ++ + ++ A+++ D+M RGV
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRK-NIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P + Y++++++LC ++D A + D G +P +S L + L G E A
Sbjct: 432 PPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDA 489
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 154/306 (50%), Gaps = 1/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID++CK + V A ++F +M + PD+ +Y+ L+ G+ L +++ +M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ +PDV ++ I++NA C + E +F M KP+ + +L++G K ++
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F + G P+ +Y+ ++ +C + ++A + EM + I P+ TY ++
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+GR A + +M + G P + TY ++ C QVD A+ + + K +G
Sbjct: 408 DGLSKSGRISYALQLVDQMHDR-GVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGF 466
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + YS LI LC KL+DA K F+++L G ++ + Q EG+ A+
Sbjct: 467 QPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALA 526
Query: 313 LAQKID 318
L K++
Sbjct: 527 LLSKME 532
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 160/325 (49%), Gaps = 9/325 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K L + N LI+ C+ + A VF K+ K + PD ++T L +G + +
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA 174
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ GF D +SYG +I+ C A++L + ++ +P+ ++ T+I+
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ K ++EA F + +G P+ TY+A++ +C ++ DA + ++M I P+
Sbjct: 235 MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I+++ K G+ +E +VF M K G +P TY ++ +C +V+ A I+
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMM-MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIF 353
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M GV P + YS +IN C K D+A F+EM I P +S+L L
Sbjct: 354 NTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKS 413
Query: 305 GMEETAVVLAQKIDKLRKTPLVDRG 329
G A+ Q +D++ DRG
Sbjct: 414 GRISYAL---QLVDQMH-----DRG 430
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 147/290 (50%), Gaps = 1/290 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ LI C ++ A ++F+KM PD+ ++ IL+ + + +
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G +P+ V+Y +++ +C K ++A +F M P + +ING
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMING 374
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K+ EA+ F + ++ P+ TY++++ S RI+ A +++D+M G+ PN
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +L L K + ++A ++ + K G +P +STY I+++ C + +++ A +++
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLTKFKDK-GFQPDISTYSILIKGLCQSGKLEDARKVF 493
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+++ +G ++ Y+ +I C E ++A +M D G P + +
Sbjct: 494 EDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 106/271 (39%), Gaps = 37/271 (13%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR------LS 132
+ +SY S D+AV LF + N P F ++ L K LS
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 133 EALQF-----------------------------FGQSKKRGFEPEAPTYNAVVGAYCWS 163
+ ++F F + K G+ P+ T+ + C
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+I A+ D++ G + +Y ++H L K G T A + +R+ +P V
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL-VQPNVVM 227
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y ++ C V+ A ++ EM ++G+ P + YS LI+ C KL DA F +M+
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 284 DIGIRPPGQLFSNLKQAL-RDEGMEETAVVL 313
I+P F+ L A +D M+E V
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/167 (17%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+Y++ + + ++DA + + + + P ++ +L L+K+ + ++M
Sbjct: 52 SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ G +P + I++ FC + A ++ ++ G +P ++TL LC + +
Sbjct: 112 EFR-GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+ A + +++ +G + L L G A+ L Q++D
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 6/321 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+FG+ ++ N L+DTLCK R V+RA+ VF +++ PD S+ L+ GW + +
Sbjct: 286 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARM 344
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EMK GF P VV+Y ++ A+C K + L EM C P+ +
Sbjct: 345 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 404
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ LG R EAL F + K+ G P+A YN+++ + R+ DAY +++EMR G
Sbjct: 405 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 464
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T++ ++ + E A + +M + P + TY ++++ C V +
Sbjct: 465 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQ-SCNPDIKTYTPLLKLCCKRQWVKIL 523
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + + P Y+ L++ LC K+ +C + +EM+ G P + F + +
Sbjct: 524 LFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEK 583
Query: 301 LRDEGMEETAVVLAQKIDKLR 321
L ++ + +KI LR
Sbjct: 584 LEKRNLQS----VYKKIQVLR 600
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 2/278 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
SY ++++ G+ K M + +M + G +++ ++ A R+ EA++ F +M
Sbjct: 227 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 286
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ L++ L E+ + A F Q + P+ ++N +V +C + +
Sbjct: 287 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVF-QELRGTIPPDENSFNTLVHGWCKARML 345
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A M+EM++ G P+ TY ++ + Y++ M RK P V TY I
Sbjct: 346 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEM-RKRRCPPNVVTYTI 404
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ + A+ +D++K GV P Y++LI L +L+DA +EM G
Sbjct: 405 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 464
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
I P F+ L A D E A+ L K+++ P
Sbjct: 465 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 502
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ ++++M + G + T V+ L A R EA F +M R G +++
Sbjct: 245 WGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRF-GVVKDTKAMNVLLD 303
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPV-MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C V A ++ E+ RG +P + ++TL++ C L +A +EM G
Sbjct: 304 TLCKERSVKRARGVFQEL--RGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFS 361
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
P +++L +A E +T L ++ K R P V
Sbjct: 362 PSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNV 399
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 6/321 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+FG+ ++ N L+DTLCK R V+RA+ VF +++ PD S+ L+ GW + +
Sbjct: 227 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARM 285
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EMK GF P VV+Y ++ A+C K + L EM C P+ +
Sbjct: 286 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 345
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ LG R EAL F + K+ G P+A YN+++ + R+ DAY +++EMR G
Sbjct: 346 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 405
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T++ ++ + E A + +M + P + TY ++++ C V +
Sbjct: 406 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQ-SCNPDIKTYTPLLKLCCKRQWVKIL 464
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + + P Y+ L++ LC K+ +C + +EM+ G P + F + +
Sbjct: 465 LFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEK 524
Query: 301 LRDEGMEETAVVLAQKIDKLR 321
L ++ + +KI LR
Sbjct: 525 LEKRNLQS----VYKKIQVLR 541
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 2/278 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
SY ++++ G+ K M + +M + G +++ ++ A R+ EA++ F +M
Sbjct: 168 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 227
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ L++ L E+ + A F Q + P+ ++N +V +C + +
Sbjct: 228 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVF-QELRGTIPPDENSFNTLVHGWCKARML 286
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A M+EM++ G P+ TY ++ + Y++ M RK P V TY I
Sbjct: 287 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEM-RKRRCPPNVVTYTI 345
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ + A+ +D++K GV P Y++LI L +L+DA +EM G
Sbjct: 346 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 405
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
I P F+ L A D E A+ L K+++ P
Sbjct: 406 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 443
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 4/191 (2%)
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
F + G+ A +Y+ +V + + + ++++M + G + T V+ L
Sbjct: 153 FMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLA 212
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV- 255
A R EA F +M R G +++ C V A ++ E+ RG +P
Sbjct: 213 GASRWTEAIDAFHKMDRF-GVVKDTKAMNVLLDTLCKERSVKRARGVFQEL--RGTIPPD 269
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ ++TL++ C L +A +EM G P +++L +A E +T L
Sbjct: 270 ENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLD 329
Query: 316 KIDKLRKTPLV 326
++ K R P V
Sbjct: 330 EMRKRRCPPNV 340
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 5/313 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG Q+L FN ++D LCKS+ VE A +F K+ K +F D SY +++ GW K
Sbjct: 162 MHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLF-KVFKGKFRADCVSYNVMVNGWCLIKR 220
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ +EM G P++ SY M+ + A + +EA + F EM+ +C+ + T
Sbjct: 221 TNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTT 280
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G G + A + F K+G P TYNA + C +++A + +EM G
Sbjct: 281 VIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKG 340
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ TY++V+ L G E A RM + G EP V TY +V+R FC ++D A
Sbjct: 341 YVPNSITYNLVIRGLCHRGEMERAMEFMGRM-KDDGCEPNVQTYNLVIRYFCDEGEIDKA 399
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFSNL 297
+ ++ +M + LP + Y+ LI+++ K DD A EM+D G P F+ +
Sbjct: 400 LDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRV 459
Query: 298 KQALRDEGMEETA 310
L G + A
Sbjct: 460 LNGLLLTGNQGFA 472
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 149/309 (48%), Gaps = 8/309 (2%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
++ ID + R + + +M+ R P K++ I+ E + +V+ M
Sbjct: 103 SYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSM 162
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA---TNCKPSPHIFCTLINGLGSE 128
G D+ S+ +++ C +KR + A LF+ + +C + ++NG
Sbjct: 163 HQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVS----YNVMVNGWCLI 218
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
KR ++AL+ + KRG P +YN ++ Y + +IN+A+ EM+K + TY
Sbjct: 219 KRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITY 278
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
V+H AG + A VF M +K G P+V+TY +++ C VD A+ I++EM
Sbjct: 279 TTVIHGFGVAGEIKRARKVFDTMVKK-GVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMV 337
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+G +P Y+ +I LCH +++ A ++ M D G P Q ++ + + DEG +
Sbjct: 338 VKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEID 397
Query: 309 TAVVLAQKI 317
A+ L QK+
Sbjct: 398 KALDLFQKM 406
>gi|297737723|emb|CBI26924.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 74/106 (69%), Positives = 92/106 (86%)
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
VSTYEIVVRMFC +VDMA+R+WDEMKA+GVLP MHM+STLINSLC+E+KLD+ACKYF
Sbjct: 109 VSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFH 168
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
EMLD+GIRPP +FSNLKQ L DEG ++ ++LAQK+DK+R T ++
Sbjct: 169 EMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQKLDKIRTTQVI 214
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
V +Y I++ C+ +R D A+ ++ EM+A P H+F TLIN L E +L EA ++F
Sbjct: 109 VSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFH 168
Query: 140 QSKKRGFEPEAPTYN 154
+ G P A ++
Sbjct: 169 EMLDMGIRPPAAMFS 183
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 170/317 (53%), Gaps = 2/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++ + N L+D L +++ + AQ +F+K++ R F P++++YT+LL GW + KN
Sbjct: 329 MKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVLLNGWCRIKN 387
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ + EM D GF+PD++++ M+ K+ +A++LF M+A P+ +
Sbjct: 388 LVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTI 447
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + ++ EA+++F + G +P+A Y ++ + +++ Y ++ EM++ G
Sbjct: 448 LIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKG 507
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ RTY+ ++ + ++A ++K+M + G +PT+ TY ++++ + Y +M
Sbjct: 508 CPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQN-GIQPTLHTYNMMMKSYFYTRNYEMG 566
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+W EM +G P + Y I L + ++AC+Y +EM++ G++ P ++
Sbjct: 567 CAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAAD 626
Query: 301 LRDEGMEETAVVLAQKI 317
G + LA+K+
Sbjct: 627 FSRAGKPDILEELARKM 643
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 106/273 (38%), Gaps = 74/273 (27%)
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE--ALQFF-GQSKKRGFEPEAPTY 153
DE L R MEA + + + L+ G+ + + A +FF +K GF + TY
Sbjct: 213 DELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTY 272
Query: 154 NAVVGAYCWSMRINDAYRMMDEM-----------------------RKCGIG-------- 182
NA++ + + M+ EM RK +G
Sbjct: 273 NAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMKRY 332
Query: 183 ---PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
T + +L +L +A +EA ++F+++ + P + TY +++ +C +
Sbjct: 333 NFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR--FTPNLRTYTVLLNGWCRIKNLVE 390
Query: 240 AMRIWDE-----------------------------------MKARGVLPVMHMYSTLIN 264
A R W+E MKA+G P + Y+ LI
Sbjct: 391 AGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIR 450
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
LC + K+ +A +YF EM+D G +P +++ L
Sbjct: 451 DLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCL 483
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 166/322 (51%), Gaps = 2/322 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ +LI SR++++A V + ++ DPD+ SY ++ G+ + + S
Sbjct: 92 GFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSA 150
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N+V+ M+ GF PDVV+Y IMI + CS + + A E+ E+ CKPS + LI
Sbjct: 151 NQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEA 210
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E R++EAL+ F + RG P+ TYNA++ C + A + + G P+
Sbjct: 211 TILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPD 270
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+I+L + R E+ + K M G EP V T+ I++ FC +V A+ +
Sbjct: 271 VVSYNILLRSFLNKSRWEDGERLMKDMVLS-GCEPNVVTHSILISSFCREGRVREAVNVL 329
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ MK +G+ P + Y LI++ C E +LD A +Y ++M+ G P ++ + L
Sbjct: 330 EVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKF 389
Query: 305 GMEETAVVLAQKIDKLRKTPLV 326
G + A+ + +K+D++ P V
Sbjct: 390 GCADLALDVFEKLDEVGCPPTV 411
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 151/293 (51%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I K+ ++ A +VFD+M+ R F PD+ +Y I++ + L EV E+
Sbjct: 134 YNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELL 193
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG +P V++Y I+I A R +EA+ELF E+ + +P + + +I G+ E
Sbjct: 194 KDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMED 253
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL F RG P+ +YN ++ ++ R D R+M +M G PN T+ I++
Sbjct: 254 RALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILI 313
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ GR EA +V + M K G P +Y+ ++ FC ++D+A+ ++M + G
Sbjct: 314 SSFCREGRVREAVNVLEVMKEK-GLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGC 372
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LP + Y+T++ +LC D A F+++ ++G P + ++ + AL G
Sbjct: 373 LPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCG 425
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 135/280 (48%), Gaps = 1/280 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G K + + LI+ + A E+FD++ R PD+ +Y ++ G ++
Sbjct: 194 KDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMED 253
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ R + G PDVVSY I++ + + R+++ L ++M + C+P+ LI
Sbjct: 254 RALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILI 313
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ E R+ EA+ K++G P++ +Y+ ++ A+C R++ A +++M G
Sbjct: 314 SSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCL 373
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ Y+ +L L K G + A VF+++ + G PTV Y + A+
Sbjct: 374 PDIVNYNTILATLCKFGCADLALDVFEKLD-EVGCPPTVRAYNTMFSALWSCGNKIKALE 432
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ EM +G+ P Y++LI+ LC + +D+A +M
Sbjct: 433 MISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDM 472
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 144/316 (45%), Gaps = 1/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ +L +N +I +CK +RA + + R +PD+ SY ILL + +
Sbjct: 231 GLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDG 290
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++M G EP+VV++ I+I++ C R EAV + M+ P + + LI+
Sbjct: 291 ERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISA 350
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E RL A+++ + G P+ YN ++ C + A + +++ + G P
Sbjct: 351 FCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPT 410
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
R Y+ + L G +A + M RK G +P TY ++ C + VD A+ +
Sbjct: 411 VRAYNTMFSALWSCGNKIKALEMISEMIRK-GIDPDEITYNSLISCLCRDGLVDEAIGLL 469
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M+A P + ++ ++ +C ++ + + M++ G P + L + +
Sbjct: 470 VDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYA 529
Query: 305 GMEETAVVLAQKIDKL 320
G A+ LA + +L
Sbjct: 530 GWRAEAMELANSLYRL 545
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 113/238 (47%), Gaps = 1/238 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LI + C+ V A V + MK++ PD SY L+ + ++ L E +M DG
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG 371
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PD+V+Y ++ C D A+++F +++ C P+ + T+ + L S +AL
Sbjct: 372 CLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKAL 431
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + ++G +P+ TYN+++ C +++A ++ +M P +++IVL +
Sbjct: 432 EMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGM 491
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
KA R E + M K G P ++Y +++ Y AM + + + GV+
Sbjct: 492 CKAHRVFEGIELLITMVEK-GCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVI 548
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 107/204 (52%), Gaps = 2/204 (0%)
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++N C A +++E++ + + KP + LI G + + L +A++ + G
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P+ +YNA++ + + +I+ A ++ D MR G P+ TY+I++ L G+ E A+
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
V + K G +P+V TY I++ +++ A+ ++DE+ +RG+ P ++ Y+ +I
Sbjct: 187 EVMDEL-LKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRG 245
Query: 266 LCHEDKLDDACKYFQEMLDIGIRP 289
+C E D A + + + G P
Sbjct: 246 ICKEGMEDRALDFVRHLSARGCNP 269
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+E+L F +GF+P+ ++ + S + A R+M+ + G P+ +Y+ +
Sbjct: 79 NESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAM 137
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ KA + + A VF RM R G P V TY I++ C ++++A + DE+ G
Sbjct: 138 ISGFSKANQIDSANQVFDRM-RSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDG 196
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+ LI + E ++++A + F E++ G+RP ++ + + + EGME+ A+
Sbjct: 197 CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRAL 256
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 85/177 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ ++N ++ TLCK + A +VF+K+ + P +++Y + N +
Sbjct: 371 GCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKA 430
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ EM G +PD ++Y +I+ C DEA+ L +MEAT +P+ F ++ G
Sbjct: 431 LEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLG 490
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+ R+ E ++ ++G P +Y ++ ++ +A + + + + G+
Sbjct: 491 MCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N LI LC+ V+ A + M+ RF P + S+ I+L G +
Sbjct: 437 MIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHR 496
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
+ E+ M + G P+ SY ++I A EA+EL
Sbjct: 497 VFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMEL 538
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 164/311 (52%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + + +N LID+LCK + V A ++F MK +R PDI +Y L++G +
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRR 285
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM P++ ++ ++++A C + EA +F+ M +P + +
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ G + EA + F +G +P+A +YN ++ YC + RI++A ++ +EM G
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ Y+ ++H L + GR EA +FK M G P + TY +++ FC + A
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN-GNLPDLFTYSMLLDGFCKEGYLGKA 464
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ M++ + P + MY+ LI+++C L DA K F E+ G+ P Q+++ +
Sbjct: 465 FRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINN 524
Query: 301 LRDEGMEETAV 311
L EG+ + A+
Sbjct: 525 LCKEGLLDEAL 535
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL ++ + LID + V+ A VF KM K PD ++ L+ G +
Sbjct: 121 MELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGK 180
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E + + + G +P V +Y +IN C A LF++ME C+P+ +
Sbjct: 181 FAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNI 240
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L +K ++EAL F K + P+ TYN+++ C R +A +++EM
Sbjct: 241 LIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLN 300
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T+++++ + K G+ EA VFK M+ G EP V TY ++ + ++ A
Sbjct: 301 IMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEM-GVEPDVVTYSSLMYGYSLRMEIVEA 359
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++D M +G P Y+ LI C ++D+A + F EM+ G+ P ++ L
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419
Query: 301 LRDEG 305
L G
Sbjct: 420 LCQLG 424
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ ++ ++ L+ + A+++FD M + PD SY IL++G+ + K
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G PD V+Y +I+ C R EA +LF+ M + P +
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G E L +A + F + +P+ YN ++ A C + DA ++ E+ G
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN + Y ++++L K G +EA F+ M G P +Y +++R F A
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNM-EGDGCPPDEFSYNVIIRGFLQYKDESRA 569
Query: 241 MRIWDEMKARGVL 253
++ EM+ RG +
Sbjct: 570 AQLIGEMRDRGFV 582
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD ++ L+D CK ++ +A +F M+ PDI Y IL++ + NL +
Sbjct: 442 LPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARK 501
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ E+ G P+V Y +IN C DEA+E FR ME C P + +I G
Sbjct: 502 LFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFL 561
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPT 152
K S A Q G+ + RGF EA T
Sbjct: 562 QYKDESRAAQLIGEMRDRGFVAEAGT 587
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 2/234 (0%)
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA-LQFFGQSKKRGFEPEA 150
S + D+A+ F M P F L++ + + A + Q + G P+
Sbjct: 71 SFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDI 130
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
T + ++ + R++ A+ + +M K G+ P+ T++ +++ L K G+ +A F
Sbjct: 131 YTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDD 190
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
G +PTV TY ++ C + A ++ +M+ G P + Y+ LI+SLC +
Sbjct: 191 F-EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDK 249
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+++A F M I P +++L Q L + + A L ++ L P
Sbjct: 250 LVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP 303
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%)
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
I+DA + M P + +L ++K G+ A + G P + T
Sbjct: 75 IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
I++ F + +VD+A ++ +M G+ P ++TLIN LC K A ++F +
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
G +P ++ + L G A L +K+++ P V
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNV 235
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 6/321 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+FG+ ++ N L+DTLCK R V+RA+ VF +++ PD S+ L+ GW + +
Sbjct: 1547 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARM 1605
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EMK GF P VV+Y ++ A+C K + L EM C P+ +
Sbjct: 1606 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 1665
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ LG R EAL F + K+ G P+A YN+++ + R+ DAY +++EMR G
Sbjct: 1666 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 1725
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T++ ++ + E A + +M + P + TY ++++ C V +
Sbjct: 1726 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQ-SCNPDIKTYTPLLKLCCKRQWVKIL 1784
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + + P Y+ L++ LC K+ +C + +EM+ G P + F + +
Sbjct: 1785 LFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEK 1844
Query: 301 LRDEGMEETAVVLAQKIDKLR 321
L ++ + +KI LR
Sbjct: 1845 LEKRNLQS----VYKKIQVLR 1861
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 2/278 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
SY ++++ G+ K M + +M + G +++ ++ A R+ EA++ F +M
Sbjct: 1488 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 1547
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ L++ L E+ + A F Q + P+ ++N +V +C + +
Sbjct: 1548 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVF-QELRGTIPPDENSFNTLVHGWCKARML 1606
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A M+EM++ G P+ TY ++ + Y++ M RK P V TY I
Sbjct: 1607 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEM-RKRRCPPNVVTYTI 1665
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ + A+ +D++K GV P Y++LI L +L+DA +EM G
Sbjct: 1666 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 1725
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
I P F+ L A D E A+ L K+++ P
Sbjct: 1726 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1763
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ ++++M + G + T V+ L A R EA F +M R G +++
Sbjct: 1506 WGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRF-GVVKDTKAMNVLLD 1564
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPV-MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C V A ++ E+ RG +P + ++TL++ C L +A +EM G
Sbjct: 1565 TLCKERSVKRARGVFQEL--RGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFS 1622
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
P +++L +A E +T L ++ K R P V
Sbjct: 1623 PSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNV 1660
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 5/313 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++G Q+L FN ++D LCKS+ VE A +F +K + F D SY I++ GW K
Sbjct: 153 MHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGK-FKADCVSYNIIVNGWCLIKR 211
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ +EM + G P++ +Y IM+N + A + +EA F EM+ C + +
Sbjct: 212 TPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTS 271
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GLG + A F Q K G P T+NA++ C + +A + +EM K G
Sbjct: 272 VIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRG 331
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ TY++V+ L G + A + +RM EP V TY I++R FC +++
Sbjct: 332 YVPNSITYNLVIRGLCHVGEMQRAMELMERM-EDDDCEPNVQTYNILIRYFCDAGEIEKG 390
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLC---HEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ ++ +M LP + Y+ LINS+ + D L A K EM+D G P F+ +
Sbjct: 391 LDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRV 450
Query: 298 KQALRDEGMEETA 310
L G ++ A
Sbjct: 451 LDGLLLTGNQDFA 463
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 6/322 (1%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
+ F+ ID + R + +M+ R P +++ I+ E + V
Sbjct: 90 HQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTV 149
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ M + G D+ S+ +++ C +KR + A LF+ ++ K + ++NG
Sbjct: 150 FMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKG-KFKADCVSYNIIVNGWCL 208
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKCGIGPNT 185
KR +AL+ + +RG P TYN ++ Y + + N+A+ EM RKC I +
Sbjct: 209 IKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDI--DV 266
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY V+H L G + A +VF +M K G P+V+T+ ++++ C V+ A+ I++
Sbjct: 267 VTYTSVIHGLGVVGEIKRARNVFNQMV-KDGVLPSVATFNALIQILCKKDSVENAILIFE 325
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
EM RG +P Y+ +I LCH ++ A + + M D P Q ++ L + D G
Sbjct: 326 EMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAG 385
Query: 306 MEETAVVLAQKIDKLRKTPLVD 327
E + L QK+ P +D
Sbjct: 386 EIEKGLDLFQKMGNGDCLPNLD 407
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 167 bits (422), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 168/302 (55%), Gaps = 5/302 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G + + F L+D LCK+ V++A +F+ M+ R F P ++ +T LL GW ++
Sbjct: 202 MPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVR-FSPSLRHFTSLLYGWCREGK 260
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V +M++ GFEPD+V + +++A+ A + +A +L +EM C+P+ + +
Sbjct: 261 LIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTI 320
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I S++++ EA++ F + ++ G E + TY A++ +C +IN Y+++D M++ G
Sbjct: 321 MIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKG 380
Query: 181 IGPNTRTY-DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
PN TY I+L H K E + R G P +S Y +V+R+ C +V
Sbjct: 381 HMPNQLTYLRILLAHEKKEELEECLELIESM--RMVGCVPDLSIYNVVIRLACKLGEVKQ 438
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
++IW+EM+A P + + +I+ + L +AC+YF+EM+ G+ Q + LK+
Sbjct: 439 GVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRGLLTTPQ-YGILKE 497
Query: 300 AL 301
L
Sbjct: 498 LL 499
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 3/209 (1%)
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
++I SA+ ++A+E+ EM C+P ++F L++ L + +A F + R
Sbjct: 181 VLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVR 240
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
F P + +++ +C ++ +A ++ +MR+ G P+ ++ +L AG+ +A
Sbjct: 241 -FSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDA 299
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+ + K M RK G EP ++Y I+++ FC ++D AMR++ EM+ G + Y+ LI+
Sbjct: 300 FDLLKEMVRK-GCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALIS 358
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
C K++ + M G P QL
Sbjct: 359 GFCKWGKINRGYQILDAMKQKG-HMPNQL 386
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCTLINGLGSEKR 130
K G+ +Y M+ +++ L EM N + +F LI S +
Sbjct: 132 KQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVLIRRFASARL 191
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ +A++ + K G EP+ + ++ A C + + A + ++MR P+ R +
Sbjct: 192 VEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMR-VRFSPSLRHFTS 250
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L+ + G+ EA V +M R+ G EP + + ++ + ++ A + EM +
Sbjct: 251 LLYGWCREGKLIEAKHVLVQM-REAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRK 309
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
G P + Y+ +I + C ++K+D+A + F EM G
Sbjct: 310 GCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTG 345
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 3/170 (1%)
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-CGIGPNTRTYDIVLHHL 195
F SK+ G+ Y A+V + + + +++EMRK + + + +++
Sbjct: 127 FVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVLIRRF 186
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
A E+A V M K G EP + ++ C N V A ++++M+ R P
Sbjct: 187 ASARLVEKAIEVLDEMP-KYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMRVR-FSPS 244
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ +++L+ C E KL +A +M + G P +F+NL A G
Sbjct: 245 LRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAG 294
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTL 262
Y F S++PG + Y+ +V++F Q + +EM K VL ++ L
Sbjct: 123 GYRFFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVL 182
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
I ++ A + EM G P +F L AL G + A L + + ++R
Sbjct: 183 IRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDM-RVRF 241
Query: 323 TP 324
+P
Sbjct: 242 SP 243
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 166/319 (52%), Gaps = 3/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FGLK + D ++L+ LCK +H + AQ++FD++K +F K+Y+IL+ GWG
Sbjct: 170 MVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVK-HQFQTRAKTYSILVRGWGDIGE 228
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+S +V+ EM++ DV++Y ++ A C + EA ++FREM + KP F
Sbjct: 229 SVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSI 288
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I + A + + K+ P TYN ++ C ++ +AY++++E+ +
Sbjct: 289 FIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERS 348
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+ +L + + A + RM K P +Y +++++ + D A
Sbjct: 349 GQPDAWSYNAILAYHCEHSEVNSATRLISRMV-KDNCLPDKHSYNMLLKLLIRVGRFDRA 407
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+ +W+ M +G P + YS +++ LC + KL++ACKYF+ M+D GI P L+
Sbjct: 408 IEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRN 467
Query: 300 ALRDEGMEETAVVLAQKID 318
L G+ + +LA K++
Sbjct: 468 RLIGLGLLDYIEILAGKME 486
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 3/250 (1%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEA 99
FD +SY IL++ G K + + E+++ FE + ++ A+ A +A
Sbjct: 104 FDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDA 163
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ F M KP+ L+ L K A Q F + K + F+ A TY+ +V
Sbjct: 164 IRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQ-FQTRAKTYSILVRG 222
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+ A ++ DEMR+ + Y+ +L K G+ EAY +F+ M G +P
Sbjct: 223 WGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSN-GIKP 281
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
T+ I +R +C + +A R+ DEMK ++P + Y+ +I LC ++K+++A +
Sbjct: 282 DACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLL 341
Query: 280 QEMLDIGIRP 289
E+++ +P
Sbjct: 342 NEIIERSGQP 351
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKK-RGFEPEAPTYNAVVGAYCWSMRINDAY 170
K S HI L++ LGS K+ + F + ++ + FE + V AY + +DA
Sbjct: 108 KESYHI---LVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDAI 164
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
R D M + G+ P D +L+ L K + A +F R+ + T TY I+VR
Sbjct: 165 RAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTR--AKTYSILVRG 222
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ + A +++DEM+ + + Y++L+ + C K+ +A K F+EM GI+P
Sbjct: 223 WGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPD 282
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKI-DKLRKTPLV 326
FS +A E + LA ++ D++++ LV
Sbjct: 283 ACTFSIFIRAY----CEANDIHLAYRVLDEMKRYDLV 315
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 6/321 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+FG+ ++ N L+DTLCK R V+RA+ VF +++ PD S+ L+ GW + +
Sbjct: 1506 MDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARM 1564
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EMK GF P VV+Y ++ A+C K + L EM C P+ +
Sbjct: 1565 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 1624
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ LG R EAL F + K+ G P+A YN+++ + R+ DAY +++EMR G
Sbjct: 1625 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 1684
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T++ ++ + E A + +M + P + TY ++++ C V +
Sbjct: 1685 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQ-SCNPDIKTYTPLLKLCCKRQWVKIL 1743
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + + P Y+ L++ LC K+ +C + +EM+ G P + F + +
Sbjct: 1744 LFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEK 1803
Query: 301 LRDEGMEETAVVLAQKIDKLR 321
L ++ + +KI LR
Sbjct: 1804 LEKRNLQS----VYKKIQVLR 1820
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 2/278 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
SY ++++ G+ K M + +M + G +++ ++ A R+ EA++ F +M
Sbjct: 1447 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 1506
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ L++ L E+ + A F Q + P+ ++N +V +C + +
Sbjct: 1507 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVF-QELRGTIPPDENSFNTLVHGWCKARML 1565
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A M+EM++ G P+ TY ++ + Y++ M RK P V TY I
Sbjct: 1566 KEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEM-RKRRCPPNVVTYTI 1624
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ + A+ +D++K GV P Y++LI L +L+DA +EM G
Sbjct: 1625 LMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTG 1684
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
I P F+ L A D E A+ L K+++ P
Sbjct: 1685 IAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 1722
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ ++++M + G + T V+ L A R EA F +M R G +++
Sbjct: 1465 WGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDRF-GVVKDTKAMNVLLD 1523
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPV-MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C V A ++ E+ RG +P + ++TL++ C L +A +EM G
Sbjct: 1524 TLCKERSVKRARGVFQEL--RGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFS 1581
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
P +++L +A E +T L ++ K R P V
Sbjct: 1582 PSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNV 1619
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 146/277 (52%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID LCK + AQ V M KR PDI +Y L+EG+ ++N+ E++ M
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPDV++Y ++I+ +C K DEA+ LF+E+ N P+ + +LI+GL + R+S
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + P+ TYN ++ A C RI +A ++ M K G+ PN TY+ ++
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
A +F RM K G EP + Y +++ +C VD A+ ++ EM+ + +
Sbjct: 448 DGYCLRNNVNVAKDIFNRMV-KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+P + Y++LI+ LC+ ++ + EM D G P
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N LID C + ++ KM + DPD ++ IL++ ++ +L
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V M G +PD+V+Y ++ +CS + EA ELF M +P + LI+G
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + EA+ F + + P +YN+++ C S RI+ +++DEM P+
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I++ L K GR EA V M +K G +P + TY ++ +C V++A I+
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKK-GVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M G+ P + Y+ LIN C + +D+A F+EM + P +++L L +
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523
Query: 305 G 305
G
Sbjct: 524 G 524
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 2/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID LCK + A V M K+ P+I +Y +++G+ + N+ +++ M
Sbjct: 408 YNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV 467
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD+++Y ++IN +C + DEA+ LF+EM N P + +LI+GL + R+
Sbjct: 468 KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIP 527
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + G P+ TYN ++ A+C + + A + ++ + GI P+ T ++
Sbjct: 528 HVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIV 586
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+L K + + A K + G P V TY I++ C + AM + +M+
Sbjct: 587 DNLCKGEKLKMAEDALKHLLMH-GCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
P + +I L ++ D A K +EM+ G+
Sbjct: 646 PPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + F LI+ H A + + K + P++ ++ ++ G+ +
Sbjct: 85 GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + + G+ D +YG +IN + A+ L +EME ++ +P+ ++ LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +S+AL Q +RG +A TYN+++ C R + +++ +M + + P+
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I++ L K GR EA V MS++ G +P + TY ++ +C V A ++
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKR-GEKPDIVTYNALMEGYCSRENVHEARELF 323
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M RG+ P + Y+ LI+ C +D+A F+E+ + + P +++L L +
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS 383
Query: 305 G 305
G
Sbjct: 384 G 384
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 144/322 (44%), Gaps = 36/322 (11%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + L FN +I+ C + + +A + + + + D +Y L+ G + +
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177
Query: 63 SMNEVYREMKDDGFEPDVVSY--------------------------GIMINA------- 89
+ + +EM+ +P++V Y GI+++A
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 90 --HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
CS R+ E +L +M N P + F LI+ L E R+ EA KRG +
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P+ TYNA++ YC +++A + + M K G+ P+ Y++++ K +EA +
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
FK + K PT+++Y ++ C + ++ ++ DEM P + Y+ LI++LC
Sbjct: 358 FKELCNK-NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416
Query: 268 HEDKLDDACKYFQEMLDIGIRP 289
E ++ +A M+ G++P
Sbjct: 417 KEGRILEALGVLVMMMKKGVKP 438
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 34/215 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL+ ++ ++N LI+ CK+ V+ A +F +M+ + PDI SY L++G
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-------TN--- 110
+ + E+ EM D G PDV++Y I+++A C + +D+A+ LFR++ TN
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAI 585
Query: 111 ------------------------CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
C P+ + LIN L + EA+ + +
Sbjct: 586 VDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
P+A T+ ++G + A ++ +EM G+
Sbjct: 646 PPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 2/238 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + ++ A Y A+ LF ++++ PS F LIN + + A
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
K G++P T+N ++ +C + I A + G + TY +++ L K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G+ + A + + M K +P + Y ++ C + V A+ + ++ RG+L
Sbjct: 173 NGQIKAALHLLQEM-EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLA 314
Y++LI+ C + + + +M+ + P F+ L AL EG + E VLA
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLA 289
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ + +A+ F + + P ++ ++GA A + +++ GI P+ T+
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
I+++ T A+S+ + K G +P + T+ ++ FC N + A+ +
Sbjct: 94 TILINCYFHQSHTAFAFSLLATI-LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLL 152
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
A+G L Y TLIN L ++ A QEM ++P ++S L L +G
Sbjct: 153 AQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVS 212
Query: 309 TAVVLAQKI 317
A+ L +I
Sbjct: 213 DALGLCSQI 221
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 170/360 (47%), Gaps = 37/360 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G +N L+ LC + AQ ++++M K + PD+ +Y LL G+ +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP------- 113
L +++ GF PDVV+Y +IN C A + DEA + + M + N P
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 114 -----------------------SPHI--FCTLINGLGSEKR-LSEALQFFGQSKKRGFE 147
SP++ + TLI+GL E R +SEAL+ FG K+G+E
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE 180
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
PE PTYN ++ R+N+A+ + + K G+ P+ TY + + L KAGR E+A +
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
K M K G P V ++ V+ C +VD A + M+A+G P ++TLI C
Sbjct: 241 LKDMDEK-GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQC 299
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL---RDEGMEETAVVLAQKIDKLRKTP 324
K A F+EML G++P ++ L L R EG + A+ L + + + P
Sbjct: 300 RAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 157/300 (52%), Gaps = 5/300 (1%)
Query: 5 GLKQELPDFNRLIDTLCKS-RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + ++ LI LC+ R V A ++F + K+ ++P++ +Y IL++G ++ +
Sbjct: 142 GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNE 201
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E++ + G EPD ++Y + I+ C A R ++A+ + ++M+ C P +IN
Sbjct: 202 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL EKR+ EA + +G P A ++N ++ C + + A EM K G+ P
Sbjct: 262 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 321
Query: 184 NTRTYDIVLHHLIKA---GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TY+I++ L KA GR +EA ++F M K G P V TY ++ ++D A
Sbjct: 322 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK-GRVPDVVTYSALIDGLGKAGKLDDA 380
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ M+A+G +P ++ Y++LI+ LC +K+D+A + F M++ G P + + A
Sbjct: 381 RRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 135/266 (50%), Gaps = 4/266 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + E+P +N LID L K V A E+F + K +PD +YT+ ++G + +
Sbjct: 176 KQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVE 235
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ ++M + G PDVVS+ +IN C KR DEA L MEA C P+ F TLI
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM---RINDAYRMMDEMRKC 179
G + +A+ F + KRG +P TYN +V C + RI +A + D M +
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEK 355
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ TY ++ L KAG+ ++A + M K G P V TY ++ C +VD
Sbjct: 356 GRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK-GCIPNVYTYNSLISGLCGLEKVDE 414
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINS 265
A+ ++ M +G +P Y T+I++
Sbjct: 415 ALELFVAMVEKGCVPDTITYGTIISA 440
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 156/338 (46%), Gaps = 43/338 (12%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G ++ +N LI+ CK+ ++ AQ + +M PD+ +Y L+ G + +
Sbjct: 73 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV- 131
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR-YDEAVELFREMEATNCKPSPHIFCTL 121
+E + D GF P+V++Y +I+ C R EA++LF + +P + L
Sbjct: 132 --DEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNIL 189
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL E R++EA + F K G EP+A TY + C + R+ DA M+ +M + G
Sbjct: 190 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 249
Query: 182 GPNTRTYDIVLHHLIK-----------------------------------AGRTEEAYS 206
P+ +++ V++ L K AG+ ++A +
Sbjct: 250 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 309
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ---VDMAMRIWDEMKARGVLPVMHMYSTLI 263
FK M ++ G +PTV TY I+V C Q + A+ ++D M +G +P + YS LI
Sbjct: 310 TFKEMLKR-GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 368
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ L KLDDA + M G P +++L L
Sbjct: 369 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL 406
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ G ++ N +I+ LCK + V+ A+ + M+ + P+ S+ L+ G +
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAK---RYDEAVELFREMEATNCKPSPHI 117
++EM G +P VV+Y I+++ C A+ R EA+ LF M P
Sbjct: 304 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 363
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+GLG +L +A + G + +G P TYN+++ C ++++A + M
Sbjct: 364 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMV 423
Query: 178 KCGIGPNTRTYDIVL 192
+ G P+T TY ++
Sbjct: 424 EKGCVPDTITYGTII 438
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 3/162 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G FN LI C++ ++A F +M KR P + +Y IL++G + +
Sbjct: 279 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ 338
Query: 61 LLSMNE---VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ E ++ M + G PDVV+Y +I+ A + D+A L MEA C P+ +
Sbjct: 339 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT 398
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ +LI+GL +++ EAL+ F ++G P+ TY ++ A
Sbjct: 399 YNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 168/324 (51%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+D+ + ++ +N ++ +LC S +++A EV D+M +R PD+ +YTIL+E +
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+D G PDVV+Y +++N C R DEA++ +M ++ C+P+
Sbjct: 255 VGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + S R +A + ++GF P T+N ++ C + A ++++M K G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ +Y+ +LH K + + A +RM + G P + TY ++ C + +V+ A
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I +++ ++G PV+ Y+T+I+ L K A K EM ++P +S+L
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG + A+ + +++ P
Sbjct: 494 LSREGKVDEAIKFFHEFERMGVRP 517
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 155/323 (47%), Gaps = 13/323 (4%)
Query: 10 LPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLS 63
+PD LI C+ +A ++ + ++ PD+ +Y +++ G+ G+ N LS
Sbjct: 134 VPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ + PDVV+Y ++ + C + + +A+E+ M +C P + LI
Sbjct: 194 V------LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ + +A++ + + RG P+ TYN +V C R+++A + +++M G P
Sbjct: 248 ATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++I+L + GR +A + M RK G P+V T+ I++ C + A+ I
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++M G P Y+ L++ C E K+D A +Y + M+ G P ++ + AL
Sbjct: 367 LEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 304 EGMEETAVVLAQKIDKLRKTPLV 326
+G E AV + ++ +P++
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVL 449
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 153/313 (48%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N L++ +CK ++ A + + M P++ ++ I+L +
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M GF P VV++ I+IN C A+++ +M C+P+ + L++G
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHG 388
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
EK++ A+++ + RG P+ TYN ++ A C ++ DA +++++ G P
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ V+ L KAG+T +A + M R +P TY +V +VD A++ +
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
E + GV P +++++ LC + D A + M++ G +P ++ L + L E
Sbjct: 508 HEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYE 567
Query: 305 GMEETAVVLAQKI 317
GM + A+ L ++
Sbjct: 568 GMAKEALELLNEL 580
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 129/253 (50%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI+ LC+ + RA ++ +KM K P+ SY LL G+ ++K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E M G PD+V+Y M+ A C + ++AVE+ ++ + C P + T
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + +A++ + + + +P+ TY+++VG ++++A + E + G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T++ ++ L K +T+ A M + G +PT ++Y I++ Y A
Sbjct: 515 VRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINR-GCKPTETSYTILIEGLAYEGMAKEA 573
Query: 241 MRIWDEMKARGVL 253
+ + +E+ +G++
Sbjct: 574 LELLNELCNKGLM 586
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 158/315 (50%), Gaps = 1/315 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N L++ LCK +E A ++ K+ PD+ +YT L++G G++K
Sbjct: 195 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 254
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++EM G D V Y +I A + +A +++ M + C P T+I+G
Sbjct: 255 YKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDG 314
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ A++ F + RG P Y+A++ C + +++ A M+ +M+K P+
Sbjct: 315 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 374
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+I++ L K+G E A + F M + G +P V TY I+V FC D A ++
Sbjct: 375 TITYNILIDGLCKSGDVEAARAFFDEM-LEAGCKPDVYTYNILVSGFCKAGNTDAACGVF 433
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M + P + Y TLI+ LC +L A YFQ M + G P ++S+L L
Sbjct: 434 DDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKS 493
Query: 305 GMEETAVVLAQKIDK 319
G E +L ++++
Sbjct: 494 GKLEGGCMLFDEMER 508
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 136/283 (48%), Gaps = 1/283 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + LID L K + A ++F +M R D YT L+ G Q +
Sbjct: 230 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQA 289
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ VY+ M G PDVV+ MI+ C A R AV +F+ MEA P+ ++ LI+G
Sbjct: 290 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 349
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +++ AL+ Q KK P+ TYN ++ C S + A DEM + G P+
Sbjct: 350 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 409
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I++ KAG T+ A VF MS P V TY ++ C Q+ A +
Sbjct: 410 VYTYNILVSGFCKAGNTDAACGVFDDMSSSH-CSPNVVTYGTLISGLCKRRQLTKASLYF 468
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
MK RG P +YS+L++ LC KL+ C F EM G+
Sbjct: 469 QHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 133/242 (54%), Gaps = 3/242 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL ++ LI LCK+R ++ A E+ +MKK PD +Y IL++G + +
Sbjct: 331 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 390
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EM + G +PDV +Y I+++ C A D A +F +M +++C P+ + T
Sbjct: 391 VEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGT 450
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL ++L++A +F K+RG P++ Y+++V C S ++ + DEM + G
Sbjct: 451 LISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 510
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N++T ++ HL KA R +EA S+F + RK G P Y ++ +A+V+
Sbjct: 511 VA-NSQTRTRLIFHLCKANRVDEAVSLFNAI-RKEGM-PHPYAYNSIISTLIKSAKVNPC 567
Query: 241 MR 242
R
Sbjct: 568 TR 569
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 150/323 (46%), Gaps = 2/323 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FG + + N L+D +++ A + F PD++++ +L+ G+ +
Sbjct: 52 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPE 111
Query: 63 SMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
V REM++D G P + ++ ++++ C + + A++ F C H + +
Sbjct: 112 EAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAI 171
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++ L K++ +A+ + G P TYNA++ C R+ +A ++ ++ G
Sbjct: 172 VDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 231
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY ++ L K R+ EAY +FK M+ + TV Y ++R ++ A
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVC-YTALIRGLLQAGKIPQAS 290
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ M ++G +P + ST+I+ LC ++ A + F+ M G+ P ++S L L
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 350
Query: 302 RDEGMEETAVVLAQKIDKLRKTP 324
+ A+ + ++ K TP
Sbjct: 351 CKARKMDCALEMLAQMKKAFCTP 373
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
S + GF+ T NA++ + + R +A ++ P+ T+++++ A
Sbjct: 49 SSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAR 108
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
EEA++V + M G P++ T+ +V+ C + +V AM ++ G +H Y
Sbjct: 109 EPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTY 168
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI-- 317
+ +++ L K+ DA +++ G P ++ L L G E A+ L +KI
Sbjct: 169 TAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 228
Query: 318 -----DKLRKTPLVD 327
D + T L+D
Sbjct: 229 NGCTPDVVTYTSLID 243
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 160/330 (48%), Gaps = 9/330 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ +I++LC V+ A K+ K PD ++T L+ G +
Sbjct: 96 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +GF+P+VV+YG +IN C A+ L R ME NC+P+ +F T
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L +++++EA F + +G P TYN+++ C +M+EM
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ T + V+ L K G EA+ V M + G EP V TY ++ C +VD+A
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR-GVEPNVVTYNALMDGHCLRNEVDVA 334
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M + + + Y+TLIN C +D A F+EM + P ++ L
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L G + A+ L + +V RGQ
Sbjct: 395 LCHVGRLQDAISLFHE--------MVARGQ 416
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 151/323 (46%), Gaps = 7/323 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID+LCK R V A +F +M + P+I +Y L+ G + + + EM
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D PDV + +++A C EA ++ M +P+ + L++G +
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A++ F + +YN ++ YC ++ A + +EM + + PNT TY+ ++
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L GR ++A S+F M + G P + TY + C N +D AM + ++
Sbjct: 393 HGLCHVGRLQDAISLFHEMVAR-GQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + +Y+T+++ +C +L+DA F + G++P ++ + L +G+ A
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511
Query: 313 LAQKIDKLRKTP------LVDRG 329
L +++K +P L+ RG
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRG 534
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 4/304 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD N ++D LCK V A +V D M R +P++ +Y L++G + + +
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ M +V+SY +IN +C + D+A+ LF EM P+ + TLI+GL
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL +A+ F + RG P+ TY + C + ++ A ++ + P+ +
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y +L + +AG E+A +F +S K G +P V TY I++ C + A +++ E
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSK-GLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G P Y+ + ++ + +EML G + L L D+G+
Sbjct: 516 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 575
Query: 307 EETA 310
+++
Sbjct: 576 DQSV 579
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 3/281 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F++M ++ P + LL + K+ ++ + R+M G PDV + I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN+ C R D A ++ +P F TLI GL E ++ EAL F + G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+P TY ++ C + A R++ M + PN + ++ L K + EA+
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++F M K G P + TY ++ C + + +EM ++P + +T++++
Sbjct: 231 NIFSEMITK-GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDE 304
LC E + +A M+ G+ P ++ L LR+E
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+T ++ +L + K S+ ++M G P V T IV+ C+ +VD A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSF-GIPPDVYTLAIVINSLCHLNRVDFAFS 126
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ G P ++TLI LC E K+ +A F +M+ G +P + L L
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186
Query: 303 DEGMEETAVVLAQKIDK 319
G A+ L + +++
Sbjct: 187 KVGNTSAAIRLLRSMEQ 203
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 166/311 (53%), Gaps = 7/311 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G + + F L+D LCK+ V+ A +F+ M+ R F+P+++ +T LL GW ++
Sbjct: 226 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREGK 284
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ V ++K+ GFEPD+V Y ++ + A + +A +L EM+ NC P+ F
Sbjct: 285 IMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTI 344
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI +++ EA++ F + + G E + TY ++ +C + AY ++D+M + G
Sbjct: 345 LIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKG 404
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y ++ K EE + + M RK G P ++ Y ++R+ C + A
Sbjct: 405 HDPSQLSYLCIMMAHEKKEELEECMELIEEM-RKIGCVPDLNIYNTMIRLVCKLGDLKEA 463
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ- 299
+R+W EM+A G+ P + Y +++ + L +AC YF+EM++ G+ Q + LK+
Sbjct: 464 VRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQ-YGTLKEL 522
Query: 300 ---ALRDEGME 307
LR E +E
Sbjct: 523 TNALLRAEKLE 533
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 137/282 (48%), Gaps = 10/282 (3%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDG---FEPDVVSYGIMINAHCSAKRYDEAVELFR 104
Y +++ G+ + ++ + EM+ + P+V + +++ S + +AVE+
Sbjct: 167 YKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEV--FIVLMRRFASVRMVKKAVEVLD 224
Query: 105 EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
EM C+P ++F L++ L + EA F + R F P + +++ +C
Sbjct: 225 EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREG 283
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+I +A ++ ++++ G P+ Y+ +L +AG+ +A+ + M +K P +++
Sbjct: 284 KIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEM-KKVNCGPNAASF 342
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
I+++ FC ++D AMRI+ EM+ G + Y+TLI+ C D A + +M+
Sbjct: 343 TILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQ 402
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
G P QL S L + E EE + + I+++RK V
Sbjct: 403 KG-HDPSQL-SYLCIMMAHEKKEELEECM-ELIEEMRKIGCV 441
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 3/189 (1%)
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
F SK+ G+ Y A++ + + +++EMRK T IVL
Sbjct: 151 FVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRF 210
Query: 197 KAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ R ++A V M K G EP + ++ C N V A ++++M+ R P
Sbjct: 211 ASVRMVKKAVEVLDEMP-KYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPN 268
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ +++L+ C E K+ +A ++ + G P +++NL G A L
Sbjct: 269 LRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLA 328
Query: 316 KIDKLRKTP 324
++ K+ P
Sbjct: 329 EMKKVNCGP 337
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 166/313 (53%), Gaps = 4/313 (1%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNE 66
L FN +I+ LCK + +A +V D MK F P++ +Y L++G+ G+ + +
Sbjct: 230 LITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADA 289
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ +EM ++ P+ V++ ++I+ C + A+++F EM++ KP+ + +L+NGL
Sbjct: 290 ILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLC 349
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+E +L+EA + +P TYNA++ YC + +A + D + K G+ PN
Sbjct: 350 NEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVI 409
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T++ +LH K G+ EEA+ + K M K G P STY ++ FC +++ + +E
Sbjct: 410 TFNTLLHGYCKFGKMEEAFLLQKVMLEK-GFLPNASTYNCLIVGFCREGKMEEVKNLLNE 468
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M+ RGV Y+ LI++ C + + A + EMLD G++P ++ L EG
Sbjct: 469 MQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGN 528
Query: 307 EETAVVLAQKIDK 319
A+ L ++++K
Sbjct: 529 LRAALNLRKQMEK 541
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 145/285 (50%), Gaps = 4/285 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVER---AQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M +G + +N LID CK V + A + +M + + P+ ++ +L++G+ +
Sbjct: 256 MKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCK 315
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+NL + +V+ EM+ G +P VV+Y ++N C+ + +EA L EM ++N KP+
Sbjct: 316 DENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVIT 375
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LING +K L EA + F K+G P T+N ++ YC ++ +A+ + M
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ G PN TY+ ++ + G+ EE ++ M + G + TY I++ +C +
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCR-GVKADTVTYNILISAWCEKKEP 494
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
A R+ DEM +G+ P Y+ L+N C E L A ++M
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQM 539
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 130/262 (49%), Gaps = 1/262 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + +N L++ LC + A+ + D+M P++ +Y L+ G+ ++K
Sbjct: 329 MQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ + G P+V+++ +++ +C + +EA L + M P+ +
Sbjct: 389 LEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNC 448
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G E ++ E + + RG + + TYN ++ A+C A R++DEM G
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+I+L+ G A ++ K+M K G V TY ++++ +C +++ A
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQM-EKEGRWANVVTYNVLIQGYCRKGKLEDA 567
Query: 241 MRIWDEMKARGVLPVMHMYSTL 262
+ +EM +G++P Y +
Sbjct: 568 NGLLNEMLEKGLIPNRTTYEII 589
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 137/315 (43%), Gaps = 21/315 (6%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
RL++ L ++H + + + D K + I +++ N + +M
Sbjct: 112 RLLNLLANAKHYPKIRSILDSFVKGETNCSI---SLIFHSLSVCSGQFCANSIIADML-- 166
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
V++Y + + A + ++ +C P L++ L E
Sbjct: 167 -----VLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNP-------LLSALVKENEFGGV 214
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ + +R P T+N V+ C ++N A ++D+M+ G PN TY+ ++
Sbjct: 215 EFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDG 274
Query: 195 LIKAGRTEEAY---SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
K GR + Y ++ K M P T+ +++ FC + + A+++++EM+++G
Sbjct: 275 YCKMGRVGKMYKADAILKEMVENK-VSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQG 333
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ P + Y++L+N LC+E KL++A EML ++P ++ L + + E A
Sbjct: 334 LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEAR 393
Query: 312 VLAQKIDKLRKTPLV 326
L I K TP V
Sbjct: 394 ELFDNIGKQGLTPNV 408
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 168/310 (54%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + ++ ++ +I+ LCK A ++ KM+++ P++ Y+ +++ + K
Sbjct: 73 MVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKL 132
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E EM + G P+VV+Y +++ C+ R +EA LF++M N P F
Sbjct: 133 ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL E + EA F ++G EP TYNA++ YC ++++A ++ + M + G
Sbjct: 193 LVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ R+Y+I++ K+GR +EA + MS K T TV TY +++ FC + + A
Sbjct: 253 CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTV-TYSTLMKGFCQDGRPQDA 311
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ +EM++ G+LP + YS +++ LC + LD+A + + M + I P +++ L Q
Sbjct: 312 QKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQG 371
Query: 301 LRDEGMEETA 310
+ + G E A
Sbjct: 372 MCNFGKLEAA 381
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 164/319 (51%), Gaps = 3/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRH--VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
MD ++ ++ LI+ C S H A V M K P+ +++ LL G +
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ +++ EM G+EPDV++Y +IN C A++L ++ME CKP+ ++
Sbjct: 61 AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
T+I+ L +K ++EA++F + RG P TY++++ +C R N+A + +M +
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ P+T T++I++ L K G EA VF+ M K G EP V+TY ++ +C +Q+D
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEK-GVEPNVNTYNALMDGYCSQSQMD 239
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++++ M +G P + Y+ LI C ++D+A EM + P +S L
Sbjct: 240 EAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLM 299
Query: 299 QALRDEGMEETAVVLAQKI 317
+ +G + A L +++
Sbjct: 300 KGFCQDGRPQDAQKLLEEM 318
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 149/301 (49%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ ++ C A +F +M +R PD ++ IL++G ++ +L
Sbjct: 147 GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEA 206
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M + G EP+V +Y +++ +CS + DEA +LF M C PS + LI G
Sbjct: 207 QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG 266
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
R+ EA + + P+ TY+ ++ +C R DA ++++EMR G+ P+
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY IVL L K G +EA+ + K M ++ EP + Y I+++ C +++ A ++
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAM-QESKIEPNIFIYTILIQGMCNFGKLEAARELF 385
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ +G+ P + Y+ +I+ L ++AC+ F++M G P ++ + Q
Sbjct: 386 SNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRN 445
Query: 305 G 305
G
Sbjct: 446 G 446
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 9/301 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD FN L+D L K + AQ VF+ M ++ +P++ +Y L++G+ Q + +
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQK 243
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M G P V SY I+I HC + R DEA L EM P + TL+ G
Sbjct: 244 LFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFC 303
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ R +A + + + G P+ TY+ V+ C +++A+ ++ M++ I PN
Sbjct: 304 QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIF 363
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y I++ + G+ E A +F + K G +P V TY +++ + A ++ +
Sbjct: 364 IYTILIQGMCNFGKLEAARELFSNLFVK-GIQPDVVTYTVMISGLLKGGLSNEACELFRD 422
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG---QLFSNLKQALRD 303
M G LP Y+ +I +A + +EM+ G Q+ S+L+ RD
Sbjct: 423 MAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSDLES--RD 480
Query: 304 E 304
E
Sbjct: 481 E 481
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + +N L+D C ++ AQ++F+ M ++ P ++SY IL++G + +
Sbjct: 217 GVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEA 276
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM PD V+Y ++ C R +A +L EM + P + +++G
Sbjct: 277 KGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDG 336
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + L EA + ++ EP Y ++ C ++ A + + GI P+
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPD 396
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ L+K G + EA +F+ M+ G P TY ++++ F N A R+
Sbjct: 397 VVTYTVMISGLLKGGLSNEACELFRDMAVH-GCLPNSCTYNVIIQGFLRNGDTSNAGRLI 455
Query: 245 DEMKARG 251
+EM RG
Sbjct: 456 EEMVGRG 462
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 112/227 (49%), Gaps = 1/227 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LI CKS ++ A+ + +M + PD +Y+ L++G+ Q
Sbjct: 248 MVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM+ G PD+++Y I+++ C DEA EL + M+ + +P+ I+
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTI 367
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G+ + +L A + F +G +P+ TY ++ N+A + +M G
Sbjct: 368 LIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHG 427
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
PN+ TY++++ ++ G T A + + M + G ST++++
Sbjct: 428 CLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGR-GFSADSSTFQML 473
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 219 PTVSTYEIVVRMFCYNAQ--VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P V T I++ FC++ A + M G+ P +STL+N L + K+ DA
Sbjct: 8 PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
K F EM+ +G P +S + L G A+ L +K+++
Sbjct: 68 KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEE 110
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 160/330 (48%), Gaps = 9/330 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ +I++LC V+ A K+ K PD ++T L+ G +
Sbjct: 96 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +GF+P+VV+YG +IN C A+ L R ME NC+P+ +F T
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L +++++EA F + +G P TYN+++ C +M+EM
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ T + V+ L K G EA+ V M + G EP V TY ++ C +VD+A
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR-GVEPNVVTYNALMDGHCLRNEVDVA 334
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M + + + Y+TLIN C +D A F+EM + P ++ L
Sbjct: 335 VKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHG 394
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L G + A+ L + +V RGQ
Sbjct: 395 LCHVGRLQDAISLFHE--------MVARGQ 416
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 151/323 (46%), Gaps = 7/323 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID+LCK R V A +F +M + P+I +Y L+ G + + + EM
Sbjct: 213 FSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 272
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D PDV + +++A C EA ++ M +P+ + L++G +
Sbjct: 273 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 332
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A++ F + +YN ++ YC ++ A + +EM + + PNT TY+ ++
Sbjct: 333 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 392
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L GR ++A S+F M + G P + TY + C N +D AM + ++
Sbjct: 393 HGLCHVGRLQDAISLFHEMVAR-GQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + +Y+T+++ +C +L+DA F + G++P ++ + L +G+ A
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511
Query: 313 LAQKIDKLRKTP------LVDRG 329
L +++K +P L+ RG
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRG 534
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 4/311 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD N ++D LCK V A +V D M R +P++ +Y L++G + + +
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ M +V+SY +IN +C + D+A+ LF EM P+ + TLI+GL
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 396
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL +A+ F + RG P+ TY + C + ++ A ++ + P+ +
Sbjct: 397 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y +L + +AG E+A +F +S K G +P V TY I++ C + A +++ E
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSK-GLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G P Y+ + ++ + +EML G + L L D+G+
Sbjct: 516 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 575
Query: 307 EETAVVLAQKI 317
+++ + KI
Sbjct: 576 DQSVKQILCKI 586
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 3/281 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F++M ++ P + LL + K+ ++ + R+M G PDV + I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN+ C R D A ++ +P F TLI GL E ++ EAL F + G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+P TY ++ C + A R++ M + PN + ++ L K + EA+
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++F M K G P + TY ++ C + + +EM ++P + +T++++
Sbjct: 231 NIFSEMITK-GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDE 304
LC E + +A M+ G+ P ++ L LR+E
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+T ++ +L + K S+ ++M G P V T IV+ C+ +VD A
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSF-GIPPDVYTLAIVINSLCHLNRVDFAFS 126
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ G P ++TLI LC E K+ +A F +M+ G +P + L L
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186
Query: 303 DEGMEETAVVLAQKIDK 319
G A+ L + +++
Sbjct: 187 KVGNTSAAIRLLRSMEQ 203
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 162/311 (52%), Gaps = 8/311 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + +N +ID CK+ + +A + +M +R P+ ++ IL++G+ + +N
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +V+ EM+ G +P+VV+Y +IN CS + DEA+ L +M KP+ +
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING +K L EA + KRG P T+N ++ AY + R++DA+ + M G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ ++ + G +EA + K M G + + TY I+V C + A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN-GLKADLVTYNILVDALCKKGETRKA 493
Query: 241 MRIWDE---MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+R+ DE M+ +G + Y+ LI C++ KL++A + EML+ G+ P +
Sbjct: 494 VRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY--- 550
Query: 298 KQALRDEGMEE 308
LRDE ME+
Sbjct: 551 -DILRDEMMEK 560
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 142/270 (52%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ +I+ LCK ++A +V + MK F P + +Y +++G+ + + + + +EM
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+ +++ I+I+ C + A ++F EM+ +P+ + +LINGL S +L
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL + G +P TYNA++ +C + +A M+D++ K G+ PN T++ ++
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
KAGR ++A+ + + M G P VSTY ++ FC V A ++ EM+ G+
Sbjct: 412 DAYGKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ Y+ L+++LC + + A + EM
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEM 500
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 157/319 (49%), Gaps = 1/319 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G + N ++ +L K + + V+ +M +RR ++ ++ +++ G +
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQK 247
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+V +MK GF P V++Y +I+ +C A + +A L +EM A P+ F LI+
Sbjct: 248 AGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILID 307
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G ++ ++ A + F + +++G +P TYN+++ C + ++++A + D+M G+ P
Sbjct: 308 GFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKP 367
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY+ +++ K +EA + + ++ G P V T+ ++ + ++D A +
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKR-GLAPNVITFNTLIDAYGKAGRMDDAFLL 426
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
M GV P + Y+ LI C E + +A K +EM G++ ++ L AL
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCK 486
Query: 304 EGMEETAVVLAQKIDKLRK 322
+G AV L ++ + K
Sbjct: 487 KGETRKAVRLLDEMTLMEK 505
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 147/303 (48%), Gaps = 1/303 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ K+ ++ A E FD+ F S +L ++ + + VY+EM
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+VV++ ++IN C ++ +A ++ +M+A PS + T+I+G ++ +A
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + P T+N ++ +C + A ++ +EM++ G+ PN TY+ +++ L
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
G+ +EA + +MS G +P V TY ++ FC + A + D++ RG+ P
Sbjct: 345 CSNGKLDEALGLQDKMSGM-GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ ++TLI++ ++DDA MLD G+ P ++ L EG + A LA+
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463
Query: 316 KID 318
+++
Sbjct: 464 EME 466
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 23/289 (7%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRF--DPDIKSYTILLEGWGQQKN 60
+FG + F RL+ L +++ + + + D K + I +L WG +
Sbjct: 100 EFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANS 159
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ V+ +K+ E D+ G +D A + + A +C P
Sbjct: 160 IIVDMLVWAYVKNG--EMDLALEG-----------FDRAGDYGFRLSALSCNP------- 199
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ L E R+ + + +R T++ V+ C + A ++++M+ G
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ KAG+ +A ++ K M K P T+ I++ FC + V A
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR-IHPNEITFNILIDGFCRDENVTAA 318
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++++EM+ +G+ P + Y++LIN LC KLD+A +M +G++P
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKP 367
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 166/324 (51%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G +L + LID LC + +E A+E+F KMK PD Y LL+ + +
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGD 347
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E + +M+ DG+ PDVV++ I+++ C A+ +DEA F M P+ H + T
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL R+ +AL+ G + G +P A TYN + + S A ++M+ G
Sbjct: 408 LICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKG 467
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + L+ L + GR EA ++F + R+ G P TY ++++ + QVD A
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGL-RENGLAPDSVTYNMMMKCYSKVGQVDEA 526
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + EM G P + + ++LI+SL ++D+A + F M D+ + P ++ L
Sbjct: 527 VNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSG 586
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG + A+ L + + + + +P
Sbjct: 587 LGKEGRVQKAIELFESMIEKKCSP 610
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 166/341 (48%), Gaps = 17/341 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK L ++ L+ L K R E + +M+ P++ ++TI + G+ +
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA 281
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++R M D+G PD+V+Y ++I+A C+A + + A ELF +M+A KP I+ TL++
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK 341
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +F+ Q + G+ P+ T+ +V C + ++A+ D MRK GI PN
Sbjct: 342 FNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPN 401
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L++AGR E+A + M G +PT TY I + F + + A+ +
Sbjct: 402 LHTYNTLICGLLRAGRIEDALKLLGTM-ESVGVQPTAYTYNIFIDYFGKSGETGKAVETF 460
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--------- 295
++MKA+G++P + + + SL +L +A F + + G+ P ++
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520
Query: 296 -------NLKQALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
NL + G E +V+ ID L K VD
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 2/296 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
L+ LCK + A ++FDK KK P + SY L+ + +++++MK+
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G PD ++ +++ H + + E EL++EM + CKP + +I+ L L +A
Sbjct: 818 GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L FF F P TY ++ R+ +A R+ +EM G PN ++I+++
Sbjct: 878 LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K G TE A +FKRM + G P + +Y I+V C +VD A+ ++E+K+ G+ P
Sbjct: 938 YGKIGDTETACQLFKRMVNE-GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
Y+ +IN L ++++A + EM + GI P +++L L GM E A
Sbjct: 997 DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 152/287 (52%), Gaps = 1/287 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+ L +N LI L + + E+A ++F MK PD ++ +LL G+ +
Sbjct: 781 KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKIT 840
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ E+Y+EM +PD ++Y I+I++ + D+A++ F ++ +++ +P+P + LI
Sbjct: 841 ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL RL EA++ F + G +P +N ++ Y A ++ M GI
Sbjct: 901 DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ ++Y I++ L AGR +EA F + + G +P Y ++ + +++ A+
Sbjct: 961 PDLKSYTILVDCLCLAGRVDEALYYFNEL-KSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+++EM+ RG++P ++ Y++L+ +L ++ A + ++E+ G+ P
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEP 1066
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + FN L+ KS + E++ +M RR PD +Y I++ + N
Sbjct: 814 MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNN 873
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + ++ F P +YG +I+ R +EA+ LF EM CKP+ IF
Sbjct: 874 LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING G A Q F + G P+ +Y +V C + R+++A +E++ G
Sbjct: 934 LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ Y+ +++ L K+ R EEA +++ M R G P + TY ++ V+ A
Sbjct: 994 LDPDFIAYNRIINGLGKSQRMEEALALYNEM-RNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R+++E++ G+ P + Y+ LI + + A ++ M+ G P ++ L
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 127/252 (50%), Gaps = 1/252 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I +L KS ++++A + F + F P ++Y L++G + L ++ EM
Sbjct: 861 YNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS 920
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G +P+ + I+IN + + A +LF+ M +P + L++ L R+
Sbjct: 921 DYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVD 980
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL +F + K G +P+ YN ++ S R+ +A + +EMR GI P+ TY+ ++
Sbjct: 981 EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM 1040
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+L AG E+A +++ + + G EP V TY ++R + + + A ++ M G
Sbjct: 1041 LNLGLAGMVEQAKRMYEEL-QLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGC 1099
Query: 253 LPVMHMYSTLIN 264
P + Y+ L N
Sbjct: 1100 NPNIGTYAQLPN 1111
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 145/317 (45%), Gaps = 36/317 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G ++ F L+D LCK+R + A FD M+K+ P++ +Y L+ G +
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M+ G +P +Y I I+ + +AVE F +M+A P+
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW------------------ 162
+ L RL EA F ++ G P++ TYN ++ Y
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537
Query: 163 -----------------SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+ R+++A++M D M+ + P TY+ +L L K GR ++A
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ M K + T+S + ++ FC N +V++A++++ +M P + Y+T+I
Sbjct: 598 ELFESMIEKKCSPNTIS-FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656
Query: 266 LCHEDKLDDACKYFQEM 282
L E+K++ A +F ++
Sbjct: 657 LIKENKVNHAFWFFHQL 673
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 34/316 (10%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +++ L VE VF+ M+K+ D+ +Y + + + L M V +M+
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRK 185
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GF + SY +I+ + EA+E++R M + KPS + L+ LG ++
Sbjct: 186 AGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ + + G P T+ + + +I++AY + M G GP+ TY +++
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305
Query: 194 HLIKAGRTEEAYSVFKRM---SRKP-------------------------------GTEP 219
L AG+ E A +F +M KP G P
Sbjct: 306 ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP 365
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V T+ I+V + C D A +D M+ +G+LP +H Y+TLI L +++DA K
Sbjct: 366 DVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL 425
Query: 280 QEMLDIGIRPPGQLFS 295
M +G++P ++
Sbjct: 426 GTMESVGVQPTAYTYN 441
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 140/318 (44%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ +N ID KS +A E F+KMK + P+I + L +
Sbjct: 428 MESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ ++++G PD V+Y +M+ + + DEAV L EM C+P + +
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ EA Q F + K P TYN ++ R+ A + + M +
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT +++ +L K E A +F +M+ +P V TY V+ +V+ A
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD-CKPDVLTYNTVIYGLIKENKVNHA 666
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE-MLDIGIRPPGQLFSNLKQ 299
+ ++K + + P TL+ L ++ DA ++ M + R + +L
Sbjct: 667 FWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMG 725
Query: 300 ALRDEGMEETAVVLAQKI 317
E + A++ A+++
Sbjct: 726 GTLVEAEMDKAIIFAEEL 743
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 143/342 (41%), Gaps = 39/342 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+D CK+ VE A ++F KM PD+ +Y ++ G ++ + + ++K
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674
Query: 73 DD---------GFEPDVVSYGIMINAHCSAKRY--------------------------D 97
P +V G + +A A+ + D
Sbjct: 675 KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMD 734
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAV 156
+A+ E+ L+ L KR A Q F + +KK G P +YN +
Sbjct: 735 KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKP 215
+G A+ + +M+ G P+ T++++L K+G+ E + ++K M SR+
Sbjct: 795 IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR- 853
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+P TY IV+ + +D A+ + ++ + P Y LI+ L +L++A
Sbjct: 854 -CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ F+EM D G +P +F+ L G ETA L +++
Sbjct: 913 MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +NR+I+ L KS+ +E A ++++M+ R PD+ +Y L+ G +
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+Y E++ G EPDV +Y +I + ++ + A +++ M C P+ + L N
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 157/305 (51%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID LCK + AQ V M KR PDI +Y L+EG+ ++N+ E++ M
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPDV++Y ++I+ +C K DEA+ LF+E+ N P+ + +LI+GL + R+S
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + P+ TYN ++ A C RI +A ++ M K G+ PN TY+ ++
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
A +F RM K G EP + Y +++ +C VD A+ ++ EM+ + +
Sbjct: 448 DGYCLRNNVNVAKDIFNRMV-KSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P + Y++LI+ LC+ ++ + EM D G P ++ L A + A+
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 313 LAQKI 317
L ++I
Sbjct: 567 LFRQI 571
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N LID C + ++ KM + DPD ++ IL++ ++ +L
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V M G +PD+V+Y ++ +CS + EA ELF M +P + LI+G
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDG 344
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + EA+ F + + P +YN+++ C S RI+ +++DEM P+
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPD 404
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I++ L K GR EA V M +K G +P + TY ++ +C V++A I+
Sbjct: 405 VVTYNILIDALCKEGRILEALGVLVMMMKK-GVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M G+ P + Y+ LIN C + +D+A F+EM + P +++L L +
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523
Query: 305 G 305
G
Sbjct: 524 G 524
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 140/290 (48%), Gaps = 5/290 (1%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D+ + PD +N LID LCK + A V M K+ P+I +Y +++G+
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ N+ +++ M G EPD+++Y ++IN +C + DEA+ LF+EM N P
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LI+GL + R+ + + G P+ TYN ++ A+C + + A + ++
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV 572
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ GI P+ T ++ +L K + + A K + G P V TY I++ C +
Sbjct: 573 E-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH-GCSPNVQTYTILINALCKDGSF 630
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
AM + +M+ P + +I L ++ D A K +EM+ G+
Sbjct: 631 GEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + F LI+ H A + + K + P++ ++ ++ G+ +
Sbjct: 85 GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + + G+ D +YG +IN + A+ L +EME ++ +P+ ++ LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +S+AL Q +RG +A TYN+++ C R + +++ +M + + P+
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I++ L K GR EA V MS++ G +P + TY ++ +C V A ++
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKR-GEKPDIVTYNALMEGYCSRENVHEARELF 323
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M RG+ P + Y+ LI+ C +D+A F+E+ + + P +++L L +
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS 383
Query: 305 G 305
G
Sbjct: 384 G 384
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 144/322 (44%), Gaps = 36/322 (11%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + L FN +I+ C + + +A + + + + D +Y L+ G + +
Sbjct: 118 KSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK 177
Query: 63 SMNEVYREMKDDGFEPDVVSY--------------------------GIMINA------- 89
+ + +EM+ +P++V Y GI+++A
Sbjct: 178 AALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLI 237
Query: 90 --HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
CS R+ E +L +M N P + F LI+ L E R+ EA KRG +
Sbjct: 238 DGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEK 297
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P+ TYNA++ YC +++A + + M K G+ P+ Y++++ K +EA +
Sbjct: 298 PDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVL 357
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
FK + K PT+++Y ++ C + ++ ++ DEM P + Y+ LI++LC
Sbjct: 358 FKELCNK-NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC 416
Query: 268 HEDKLDDACKYFQEMLDIGIRP 289
E ++ +A M+ G++P
Sbjct: 417 KEGRILEALGVLVMMMKKGVKP 438
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 2/238 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + ++ A Y A+ LF ++++ PS F LIN + + A
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
K G++P T+N ++ +C + I A + G + TY +++ L K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G+ + A + + M K +P + Y ++ C + V A+ + ++ RG+L
Sbjct: 173 NGQIKAALHLLQEM-EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLA 314
Y++LI+ C + + + +M+ + P F+ L AL EG + E VLA
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLA 289
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 1/189 (0%)
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ + +A+ F + + P ++ ++GA A + +++ GI P+ T+
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
I+++ T A+S+ + K G +P + T+ ++ FC N + A+ +
Sbjct: 94 TILINCYFHQSHTAFAFSLLATI-LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLL 152
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
A+G L Y TLIN L ++ A QEM ++P ++S L L +G
Sbjct: 153 AQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVS 212
Query: 309 TAVVLAQKI 317
A+ L +I
Sbjct: 213 DALGLCSQI 221
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 168/315 (53%), Gaps = 6/315 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ ++ +ID LCK+ + A ++F++M P +Y L+ G+ + ++
Sbjct: 250 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEA 306
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M DD PDV++Y +++A C R D+A ELF++M A P F +L++G
Sbjct: 307 IRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDG 366
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E R+ +AL+ + +RG P TYN VV YC S ++ A ++ + R G PN
Sbjct: 367 LCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPN 426
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT-VSTYEIVVRMFCYNAQVDMAMRI 243
T TY+I++ +AGRT++A +++ + G PT V+ Y I++ C + + D A++
Sbjct: 427 TVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQF 486
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP-PGQLFSNLKQALR 302
++EM RG +P ++T++ +LC + A + +EM+ G P PG + + R
Sbjct: 487 YEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCR 546
Query: 303 DEGMEETAVVLAQKI 317
GM + A LA ++
Sbjct: 547 -AGMIQKADELASEL 560
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 155/323 (47%), Gaps = 7/323 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVF-DKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G+ ++ L+D LCK ++ A + ++ +R F PDI +Y+ +++G + L
Sbjct: 214 GMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRD 273
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+++ EM P ++Y +I +C A DEA+ L +M NC P + TL++
Sbjct: 274 AVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMS 330
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
RL +A + F Q P+ T+ ++V C R+ DA +++E+ + G P
Sbjct: 331 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 390
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
TY+ V+ K+ + +A + R G P TY I+V C + D A++
Sbjct: 391 TIYTYNCVVDGYCKSNQVRKAEELVADF-RSRGFVPNTVTYNILVAGCCRAGRTDQALQY 449
Query: 244 WDEMKARG--VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
D++ + G + MY+ ++++LC + + DDA ++++EM+ G P F+ + AL
Sbjct: 450 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 509
Query: 302 RDEGMEETAVVLAQKIDKLRKTP 324
+ A L +++ K TP
Sbjct: 510 CKAHQPQQAHELLEEMIKYGHTP 532
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 155/315 (49%), Gaps = 6/315 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LCK+R ++ A + MK R +P + +++ G + L VYR+M
Sbjct: 83 YYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM- 141
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+D PD ++Y +++ A R +AV++ +EM + P ++ L R+
Sbjct: 142 NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVD 201
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM-DEMRKCGIGPNTRTYDIV 191
+A + + RG A TY+A+V C R+++A ++ E+ + G P+ TY V
Sbjct: 202 DARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTV 261
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L KAGR +A +F+ MS PT TY ++ +C +D A+R+ +M
Sbjct: 262 IDGLCKAGRLRDAVDIFEEMS----CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDN 317
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+TL+++ C +LDDA + FQ+M+ + P F++L L EG E A+
Sbjct: 318 CAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 377
Query: 312 VLAQKIDKLRKTPLV 326
L ++I + P +
Sbjct: 378 ELLEEITRRGCPPTI 392
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 11/276 (3%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVY-REMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
+ D ++ ++L G L + + E++D G PD V ++ C A+ A
Sbjct: 6 YPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTA 65
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ LF +M + + LI+ L + L EA+ K RG P +N V+G
Sbjct: 66 MALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGG 124
Query: 160 YCWSMRINDA---YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
C + R+ A YR M++ P+ TY ++H L KAGR +A V + M
Sbjct: 125 LCRAGRLRHALGVYRQMNDAHP----PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARH 180
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P +T +VV+ C +VD A + +EM RG+ YS L++ LC ++LD+A
Sbjct: 181 V-PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAV 239
Query: 277 K-YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
E+ G P +S + L G AV
Sbjct: 240 ALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 275
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 37/209 (17%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L ++ F L+D LC +E A E+ +++ +R P I +Y +++G+ + +
Sbjct: 353 LSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAE 412
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIFCTLIN 123
E+ + + GF P+ V+Y I++ C A R D+A++ ++ E C S ++ +++
Sbjct: 413 ELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILD 472
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTY------------------------------ 153
L + R +A+QF+ + +RG+ P A T+
Sbjct: 473 ALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 532
Query: 154 -----NAVVGAYCWSMRINDAYRMMDEMR 177
+AVV AYC + I A + E+R
Sbjct: 533 GPGTCDAVVSAYCRAGMIQKADELASELR 561
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 156/305 (51%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID LCK + A+ +F +MK PD+ +Y L++G+G+ +L + ++ EM+
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMR 262
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G DVV+Y +IN R ++A F EM+ + F T ++ E +
Sbjct: 263 KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQ 322
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ F Q + RG P TY ++V C + R++DA ++DEM G+ PN TY +++
Sbjct: 323 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 382
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K G+ EA +V M R G + Y ++ N + A+ + ++MK +G+
Sbjct: 383 DGLCKEGKVAEADNVLSLMERG-GVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGM 441
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ +Y TLI LC + K+D+A +M G+RP +++ + AL G E AV
Sbjct: 442 ELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVA 501
Query: 313 LAQKI 317
L KI
Sbjct: 502 LLHKI 506
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 150/317 (47%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + F+ +D CK V+ A ++F +M+ R P+ +YT L++G +
Sbjct: 296 MKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 355
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM G P+VV+Y +M++ C + EA + ME K + ++ T
Sbjct: 356 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTT 415
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G AL Q K +G E + Y ++ C ++++A ++ +M CG
Sbjct: 416 LIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCG 475
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT Y ++ L KAG+ EA ++ ++ G +P V TY ++ C + A
Sbjct: 476 LRPNTVIYTTIMDALFKAGKESEAVALLHKI-LDSGFQPNVVTYCALIDGLCKAGSISEA 534
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +++M+ G+ P + Y+ LI+ C L+ A EM+D G+ ++++L
Sbjct: 535 ISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDG 594
Query: 301 LRDEGMEETAVVLAQKI 317
+ + A L K+
Sbjct: 595 YMKQANLQDAFALKTKM 611
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ + ++D L K+ A + K+ F P++ +Y L++G + +
Sbjct: 471 MAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGS 530
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M++ G +P+V +Y +I+ C ++A+ L EM ++ +
Sbjct: 531 ISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTS 590
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + L +A + + G + + Y + +C + +A ++ EM G
Sbjct: 591 LIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 650
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
I P+ Y+ ++ K G EEA S+ M
Sbjct: 651 ITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 32/179 (17%)
Query: 166 INDAYRMMDEMRKCGIGPNTR-------------------------------TYDIVLHH 194
++DA R + +R+ + PNTR T++IV+
Sbjct: 150 LDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPVPNVFTFNIVIDF 209
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K G EA ++F RM + G P V TY ++ + ++ ++ EM+ G
Sbjct: 210 LCKEGELVEARALFVRM-KAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAA 268
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ Y+ LIN +++ A YF EM G+ FS A EG+ + A+ L
Sbjct: 269 DVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKL 327
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 35/144 (24%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LID CK + +A + ++M + D YT L++G+ +Q N
Sbjct: 541 MRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQAN 600
Query: 61 L-----------------------------LSMN------EVYREMKDDGFEPDVVSYGI 85
L +MN V EM G PD Y
Sbjct: 601 LQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNC 660
Query: 86 MINAHCSAKRYDEAVELFREMEAT 109
+I + +EA L EME+
Sbjct: 661 LIRKYQKLGNMEEASSLQNEMESV 684
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 170/316 (53%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+ K + N L+D+L +++ + AQ +FDK+K+R F P++ +YT+LL GW + +N
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRN 313
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++ +M D G +PD+V++ +M+ +++ +A++LF M++ P+ +
Sbjct: 314 LIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I + + A+++F G +P+A Y ++ + +++ Y ++ EM++ G
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +TY+ ++ + E A ++ +M + EP++ T+ ++++ + +M
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNE-IEPSIHTFNMIMKSYFMARNYEMG 492
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+W+EM +G+ P + Y+ LI L E K +AC+Y +EMLD G++ P ++
Sbjct: 493 RAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 301 LRDEGMEETAVVLAQK 316
G E LAQ+
Sbjct: 553 FHRGGQPEIFEELAQR 568
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 147/304 (48%), Gaps = 5/304 (1%)
Query: 16 LIDTLCKSRHVERAQEVFD--KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
+++ L + RH + F +++ F D ++Y ++ + + +M V EM
Sbjct: 164 IVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT 223
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G + ++ I + A +AK +AV +F M+ K L++ LG K E
Sbjct: 224 KGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKE 282
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A F + K+R F P TY ++ +C + +A R+ ++M G+ P+ ++++L
Sbjct: 283 AQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLE 341
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+++ + +A +F M K G P V +Y I++R FC + ++ A+ +D+M G+
Sbjct: 342 GLLRSRKKSDAIKLFHVMKSK-GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P +Y+ LI + KLD + +EM + G P G+ ++ L + + ++ M E A +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 314 AQKI 317
K+
Sbjct: 461 YNKM 464
>gi|255580386|ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529395|gb|EEF31358.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 530
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 163/319 (51%), Gaps = 2/319 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+FN L+ C R V+ A+ VF KM + F+P+ K+ ILL G+ + +++ +M Y E+
Sbjct: 205 EFNVLLQAFCSQREVKEARSVFQKMHDQ-FNPNTKTMNILLLGFKKARDITAMELFYHEI 263
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GF+ ++Y I I+A+C + + + +F EME NC P+ TLI+G G + +
Sbjct: 264 VRRGFKATSLTYNIRIDAYCKKGYFGDGLRIFEEMEKDNCPPTLETITTLIHGAGVARNI 323
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A F + KR +P+ YNA++ + I A R+MDEM + IG ++ TY +
Sbjct: 324 HKARHLFDEIGKRNLKPDTGAYNALISSLVKCKDIESAMRLMDEMEEKHIGRDSVTYHTI 383
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L+K TE ++ RM + P T ++++ FC N+++D+ + W M +G
Sbjct: 384 FFGLMKLNDTEGVCDLYHRMISRDFV-PKTRTVVMLMKFFCVNSRLDLGLAFWQYMLDKG 442
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P H L+ LC +L +A + ++ ++ G+R ++ L+++L+ +
Sbjct: 443 YCPHGHALDLLVTGLCSRGRLLEAYECSKQFVERGMRMSEVVYRMLERSLQQSDFTDKLR 502
Query: 312 VLAQKIDKLRKTPLVDRGQ 330
L Q I KL+ +G
Sbjct: 503 ELDQMIKKLQSVLPPSKGH 521
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 10/255 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K +N ID CK + +F++M+K P +++ T L+ G G +N+
Sbjct: 267 GFKATSLTYNIRIDAYCKKGYFGDGLRIFEEMEKDNCPPTLETITTLIHGAGVARNIHKA 326
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ E+ +PD +Y +I++ K + A+ L EME + + T+ G
Sbjct: 327 RHLFDEIGKRNLKPDTGAYNALISSLVKCKDIESAMRLMDEMEEKHIGRDSVTYHTIFFG 386
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + R F P+ T ++ +C + R++ M G P+
Sbjct: 387 LMKLNDTEGVCDLYHRMISRDFVPKTRTVVMLMKFFCVNSRLDLGLAFWQYMLDKGYCPH 446
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ---VDMAM 241
D+++ L GR EAY K+ E + E+V RM + Q +
Sbjct: 447 GHALDLLVTGLCSRGRLLEAYECSKQF-----VERGMRMSEVVYRMLERSLQQSDFTDKL 501
Query: 242 RIWDEM--KARGVLP 254
R D+M K + VLP
Sbjct: 502 RELDQMIKKLQSVLP 516
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/354 (18%), Positives = 120/354 (33%), Gaps = 79/354 (22%)
Query: 28 RAQEVFD-KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV---SY 83
+A E F ++ F+P ++ + L + + E+ E+ P ++ S
Sbjct: 111 KALEFFRFSLRHSHFNPSSFAFEMTLHILARMRYFEKAWELMMEIGKS--HPSLLTLKSM 168
Query: 84 GIMINAHCSAKRYDEAVELFREMEAT---------------------------------- 109
GIM++ + Y++ +E F+ ME T
Sbjct: 169 GIMLSKIAKFQSYEDTLEAFKRMEKTVFVGKTFGTEEFNVLLQAFCSQREVKEARSVFQK 228
Query: 110 ---NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
P+ L+ G + ++ F+ + +RGF+ + TYN + AYC
Sbjct: 229 MHDQFNPNTKTMNILLLGFKKARDITAMELFYHEIVRRGFKATSLTYNIRIDAYCKKGYF 288
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
D R+ +EM K P T ++H A +A +F + ++ +P Y
Sbjct: 289 GDGLRIFEEMEKDNCPPTLETITTLIHGAGVARNIHKARHLFDEIGKR-NLKPDTGAYNA 347
Query: 227 VVRMFCYNAQVDMAMRIWDEMK-----------------------------------ARG 251
++ ++ AMR+ DEM+ +R
Sbjct: 348 LISSLVKCKDIESAMRLMDEMEEKHIGRDSVTYHTIFFGLMKLNDTEGVCDLYHRMISRD 407
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P L+ C +LD ++Q MLD G P G L L G
Sbjct: 408 FVPKTRTVVMLMKFFCVNSRLDLGLAFWQYMLDKGYCPHGHALDLLVTGLCSRG 461
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 69/170 (40%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K L LI +R++ +A+ +FD++ KR PD +Y L+ + K+
Sbjct: 298 MEKDNCPPTLETITTLIHGAGVARNIHKARHLFDEIGKRNLKPDTGAYNALISSLVKCKD 357
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S + EM++ D V+Y + + +L+ M + + P
Sbjct: 358 IESAMRLMDEMEEKHIGRDSVTYHTIFFGLMKLNDTEGVCDLYHRMISRDFVPKTRTVVM 417
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
L+ RL L F+ +G+ P + +V C R+ +AY
Sbjct: 418 LMKFFCVNSRLDLGLAFWQYMLDKGYCPHGHALDLLVTGLCSRGRLLEAY 467
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 166/319 (52%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ ++ LID+LCK R V A ++F MK + P + SYT L++G
Sbjct: 222 MGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR 281
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM PD+V++ ++I+ C EA + + M +P+ + +
Sbjct: 282 WKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNS 341
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + + EA + F RG +P+ +Y+ ++ YC RI++A ++ +EM G
Sbjct: 342 LMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG 401
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT +Y ++H + G+ EA +FK M G P + TY +++ FC + A
Sbjct: 402 LTPNTVSYTTLIHAFCQLGKLREARELFKDMHTN-GYLPDLCTYSVLLEGFCKQGYLGKA 460
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ M+ + P + MY+ LI+S+C L+ A K F E+ G++P Q+++ +
Sbjct: 461 FRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIING 520
Query: 301 LRDEGMEETAVVLAQKIDK 319
L EG+ + A+ +K+++
Sbjct: 521 LCKEGLLDEALEAFRKMEE 539
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 143/305 (46%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL N LI+ C +HV+ V K+ K P I ++T L+ G +
Sbjct: 117 MELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGE 176
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E++ +M G +PDV +Y +IN C A L ++M C+P + T
Sbjct: 177 FAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYST 236
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L ++ ++EAL F K +G P +Y +++ C R +A M++EM
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ T+ +++ K G EA V K M+ G EP V TY ++ + +V A
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEM-GVEPNVITYNSLMHGYSLQMEVVEA 355
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++D M RG P + YS LIN C ++D+A + F EM+ G+ P ++ L A
Sbjct: 356 RKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHA 415
Query: 301 LRDEG 305
G
Sbjct: 416 FCQLG 420
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 156/303 (51%), Gaps = 1/303 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GL+ + F LI+ LCK+ +A E+FD M R PD+ +YT ++ G +
Sbjct: 154 KLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETA 213
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ + ++M + G +PDVV+Y +I++ C + +EA+++F M+A P+ + +LI
Sbjct: 214 AAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLI 273
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GL S R EA + P+ T++ ++ +C + +A ++ M + G+
Sbjct: 274 QGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVE 333
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY+ ++H EA +F M + G +P V +Y I++ +C ++D A +
Sbjct: 334 PNVITYNSLMHGYSLQMEVVEARKLFDVMITR-GCKPDVFSYSILINGYCMVKRIDEAKQ 392
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+++EM +G+ P Y+TLI++ C KL +A + F++M G P +S L +
Sbjct: 393 LFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFC 452
Query: 303 DEG 305
+G
Sbjct: 453 KQG 455
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 132/286 (46%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + ++ F+ LID CK +V AQ V M + +P++ +Y L+ G+ Q
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +++ M G +PDV SY I+IN +C KR DEA +LF EM P+ + T
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTT 411
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ +L EA + F G+ P+ TY+ ++ +C + A+R+ M+
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y I++ + K+G A +F + G +P V Y ++ C +D A
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVH-GLQPDVQIYTTIINGLCKEGLLDEA 530
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+ + +M+ G P Y+ +I A + EM D G
Sbjct: 531 LEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 124/267 (46%), Gaps = 2/267 (0%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL-SMNEVYREMKDDGFEPDVVS 82
R+++ A F+ M R+ P I + LL + + ++ + ++M+ G P+ +
Sbjct: 69 RNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT 128
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
I+IN C + D + ++ +P+ F TLINGL ++AL+ F
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
RG +P+ TY ++ C A ++ +M + G P+ TY ++ L K
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVN 248
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA +F M K G PTV +Y +++ C ++ A + +EM + ++P + +S L
Sbjct: 249 EALDIFSYMKAK-GISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLL 307
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRP 289
I+ C E + +A + M ++G+ P
Sbjct: 308 IDIFCKEGNVLEAQGVLKTMTEMGVEP 334
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G +L ++ L++ CK ++ +A +F M+ P++ YTIL++ + N
Sbjct: 432 MHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGN 491
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ E+ G +PDV Y +IN C DEA+E FR+ME C P+ +
Sbjct: 492 LNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNV 551
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+I G K S A+Q G+ + +GF + T
Sbjct: 552 IIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 6/240 (2%)
Query: 88 NAHCSAKRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSEA-LQFFGQSKKR 144
+A S + D+A+ F M + KP P I F L++ + ++ +A + Q +
Sbjct: 63 DASSSFRNIDDALASFNHM--LHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELA 120
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P T N ++ +C ++ + ++ ++ K G+ P T+ +++ L KAG +A
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQA 180
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+F M + G +P V TY ++ C + A + +M G P + YSTLI+
Sbjct: 181 LELFDDMVAR-GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLID 239
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
SLC + +++A F M GI P +++L Q L + A + ++ L P
Sbjct: 240 SLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMP 299
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 166/311 (53%), Gaps = 7/311 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G + + F L+D LCK+ V+ A +F+ M+ R F+P+++ +T LL GW ++
Sbjct: 203 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREGK 261
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ V ++K+ GFEPD+V Y ++ + A + +A +L EM+ NC P+ F
Sbjct: 262 IMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTI 321
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI +++ EA++ F + + G E + TY ++ +C + AY ++D+M + G
Sbjct: 322 LIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKG 381
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y ++ K EE + + M RK G P ++ Y ++R+ C + A
Sbjct: 382 HDPSQLSYLCIMMAHEKKEELEECMELIEEM-RKIGCVPDLNIYNTMIRLVCKLGDLKEA 440
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ- 299
+R+W EM+A G+ P + Y +++ + L +AC YF+EM++ G+ Q + LK+
Sbjct: 441 VRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQ-YGTLKEL 499
Query: 300 ---ALRDEGME 307
LR E +E
Sbjct: 500 TNALLRAEKLE 510
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 122/249 (48%), Gaps = 8/249 (3%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDG---FEPDVVSYGIMINAHCSAKRYDEAVELFR 104
Y +++ G+ + ++ + EM+ + P+V + +++ S + +AVE+
Sbjct: 144 YKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEV--FIVLMRRFASVRMVKKAVEVLD 201
Query: 105 EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
EM C+P ++F L++ L + EA F + R F P + +++ +C
Sbjct: 202 EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREG 260
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+I +A ++ ++++ G P+ Y+ +L +AG+ +A+ + M +K P +++
Sbjct: 261 KIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEM-KKVNCGPNAASF 319
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
I+++ FC ++D AMRI+ EM+ G + Y+TLI+ C D A + +M+
Sbjct: 320 TILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQ 379
Query: 285 IGIRPPGQL 293
G P QL
Sbjct: 380 KG-HDPSQL 387
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 3/189 (1%)
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
F SK+ G+ Y A++ + + +++EMRK T IVL
Sbjct: 128 FVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRF 187
Query: 197 KAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ R ++A V M K G EP + ++ C N V A ++++M+ R P
Sbjct: 188 ASVRMVKKAVEVLDEMP-KYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPN 245
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ +++L+ C E K+ +A ++ + G P +++NL G A L
Sbjct: 246 LRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLA 305
Query: 316 KIDKLRKTP 324
++ K+ P
Sbjct: 306 EMKKVNCGP 314
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 158/313 (50%), Gaps = 4/313 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +NRL + L ++R ++ + P++ +Y ++++G + +L
Sbjct: 19 GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ EM++ G PD Y +I+A C A+ +A++ FR ME C+ + + +I+G
Sbjct: 79 CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDG 135
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL EA +F + KK+G P TYN ++ +C +++ AY ++ EM++ G+ PN
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY V+H + + + AY +F++M G P + TY ++ C N +D A +
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVEN-GCMPNLVTYNTLLSGLCRNGLMDEAYELL 254
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM+ RG+ P Y TL+ LC K+D A K F++ + P +S L L
Sbjct: 255 DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKA 314
Query: 305 GMEETAVVLAQKI 317
G + A L +K+
Sbjct: 315 GRLDEACKLFEKM 327
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 158/312 (50%), Gaps = 4/312 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N LID LCK+ A +F MK + +PD+ +Y+ L+ G+ + + +
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 497
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ +M PDVV++ ++ +C+A D+A L EM A++C P + + +L++G
Sbjct: 498 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 557
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA + + KRG +P TY A++ A+C + + AYR+++EM G+ PN
Sbjct: 558 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVI 617
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ G EEA + +R+ R + + Y +++ C ++ A+ + +
Sbjct: 618 TYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA 677
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM-LDIGIRPPGQLFSNLKQALRDEG 305
+K G P +Y LI LC +L A + +EM L RP + + + Q L EG
Sbjct: 678 IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREG 737
Query: 306 MEETAVVLAQKI 317
E A LA ++
Sbjct: 738 RHEEANALADEL 749
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 159/297 (53%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + ++ L+ LCK+ ++ A +VF+ PD+ +Y+ L+ G +
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ +M+++ EPDVV++ +++ C R EA ++ ME NC P+ + +
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL ++ +A + F + RG EP TYN+++ +C + ++ A +M+EM G
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ L K GR EA +F M K P V TY ++ FC ++DMA
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK-FCNPDVITYSCLIGGFCKLERIDMA 495
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++D+M + VLP + +STL+ C+ +DDA + +EM+ P +++L
Sbjct: 496 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 552
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 153/307 (49%), Gaps = 1/307 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+D LCK ++ AQ+V + M+ R P++ +Y+ L++G + + EV++ M
Sbjct: 339 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 398
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP+VV+Y +I+ C D A+ L EM AT C P + TLI+GL R
Sbjct: 399 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 458
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + FG K + P+ TY+ ++G +C RI+ A + D+M K + P+ T+ ++
Sbjct: 459 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
AG ++A + + M P V TY +V FC ++ A R+ M RG
Sbjct: 519 EGYCNAGLVDDAERLLEEMV-ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGC 577
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ LI++ C K A + +EM+ G++P + +L G E A
Sbjct: 578 QPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARK 637
Query: 313 LAQKIDK 319
+ +++++
Sbjct: 638 ILERLER 644
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 145/282 (51%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + ++ +I C+ V+ A ++F +M + P++ +Y LL G +
Sbjct: 187 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 246
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ EM++ G +PD SY ++ C + D A+++F + +C P + T
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL RL EA + F + ++ EP+ T+ A++ C R+ +A ++++ M
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ L K G+ +A VFKRM + G EP V TY ++ FC VD A
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVR-GIEPNVVTYNSLIHGFCMTNGVDSA 425
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ + +EM A G LP + Y+TLI+ LC + +A + F +M
Sbjct: 426 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 467
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 161/302 (53%), Gaps = 1/302 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+ID LCK+ + A F KMKK+ P+ +Y +L+ G+ + + + +EMK+ G
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P+VV+Y +I+ C + D A +LFR+M C P+ + TL++GL + EA
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + ++RG +P+ +Y+ ++ C + +I+ A ++ ++ P+ Y ++ L
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
KAGR +EA +F++M R+ EP V T+ ++ C ++ A ++ + M+ R P
Sbjct: 312 CKAGRLDEACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 370
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ YS+LI+ LC ++ DA + F+ M+ GI P +++L ++A++L +
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 430
Query: 316 KI 317
++
Sbjct: 431 EM 432
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 152/299 (50%), Gaps = 7/299 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD +N +I LCK+R+ +A + F M+ + ++ ++TI+++G + L
Sbjct: 91 VPDAAIYNFVIHALCKARNTAKALDYFRSMECEK---NVITWTIMIDGLCKANRLPEATT 147
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ +MK G P+ +Y ++IN C + A L +EM+ + P+ + T+I+G
Sbjct: 148 YFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFC 207
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ ++ A + F Q + G P TYN ++ C + +++AY ++DEMR+ G+ P+
Sbjct: 208 RQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKF 267
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+YD ++ L K G+ + A VF+ S P V Y ++ C ++D A +++++
Sbjct: 268 SYDTLMAGLCKTGKIDMALKVFEDNSNGD-CPPDVVAYSTLIAGLCKAGRLDEACKLFEK 326
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M+ P + ++ L++ LC D+L +A + + M D P +S+L L G
Sbjct: 327 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 385
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 115/247 (46%), Gaps = 5/247 (2%)
Query: 6 LKQE-LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
LKQ LPD F+ L++ C + V+ A+ + ++M PD+ +YT L++G+ + +
Sbjct: 503 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 562
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ V + M G +P+VV+Y +I+A C A + A L EM +P+ + +L
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622
Query: 122 INGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I G L EA + + + + + Y ++ C + R++ A +++ +++ G
Sbjct: 623 IGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 682
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P Y ++ L + +A V + M+ + P YE V++ + + A
Sbjct: 683 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 742
Query: 241 MRIWDEM 247
+ DE+
Sbjct: 743 NALADEL 749
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 134 ALQFFG-QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL+FF SK++GF+ TYN + A + RI++ ++ GI PN TY +V+
Sbjct: 7 ALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVI 66
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA-RG 251
L K+G ++A + + M R+ G P + Y V+ C A+ + M+ +
Sbjct: 67 QGLCKSGDLDKACELLEEM-RESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKN 125
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
V+ ++ +I+ LC ++L +A YF +M G P
Sbjct: 126 VIT----WTIMIDGLCKANRLPEATTYFAKMKKKGTVP 159
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + + LID C++ A + ++M P++ +Y L+ G+ +
Sbjct: 572 MAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGD 631
Query: 61 LLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L ++ + +D+ + D+ +Y +M++ C R A+EL ++ + P I+
Sbjct: 632 LEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 691
Query: 120 TLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
LI GL K L +A++ + + R P A Y AV+ R +A + DE+
Sbjct: 692 ALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 749
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
+ A F S++ G + V TY + ++D I G+ P + Y+
Sbjct: 5 DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+I LC LD AC+ +EM + G P +++ + AL
Sbjct: 65 VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHAL 104
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 163/330 (49%), Gaps = 9/330 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + N LI++ C V A V K+ K PD ++T L+ G +
Sbjct: 91 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 150
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M D+GF+P+VV+YG +IN C A+ L R ME NC+P I+ +
Sbjct: 151 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 210
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++++EA F Q +G P+ TY ++V A C ++++M
Sbjct: 211 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 270
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + V+ L K G+ EA+ + M ++ G EP V TY ++ C +++D A
Sbjct: 271 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR-GVEPDVVTYTTLMDGHCLQSEMDEA 329
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M +G P + Y+TLIN C K+D A F+EM P + ++ L
Sbjct: 330 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYG 389
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L G + A+ L + +V RGQ
Sbjct: 390 LCHVGRLQDAIALFHE--------MVARGQ 411
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 142/281 (50%), Gaps = 4/281 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD F+ ++D LCK V A E+ D M +R +PD+ +YT L++G Q + +
Sbjct: 272 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 331
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ M GF PDV+SY +IN +C + D+A+ LF EM P + TL+ GL
Sbjct: 332 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLC 391
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL +A+ F + RG P+ TY+ ++ + C + + +A ++ + + P+ +
Sbjct: 392 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQ 451
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y+I++ + +AG E A +F +S K G P+V TY I++ C ++ A +++ E
Sbjct: 452 VYNIIIDGMCRAGELEAARDLFSNLSSK-GLHPSVWTYNIMIHGLCKRGLLNEANKLFME 510
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
M P Y+T+ ++ A + +EML G
Sbjct: 511 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 151/306 (49%), Gaps = 1/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +ID+LCK R V A +F +M + PDI +YT L+ + + +M
Sbjct: 208 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 267
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ PDVV + +++A C + EA E+ M +P + TL++G + +
Sbjct: 268 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMD 327
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ F ++GF P+ +Y ++ YC +I+ A + +EM + P+T+TY+ ++
Sbjct: 328 EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLM 387
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L GR ++A ++F M + G P + TY I++ C N ++ AM + ++A +
Sbjct: 388 YGLCHVGRLQDAIALFHEMVAR-GQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + +Y+ +I+ +C +L+ A F + G+ P ++ + L G+ A
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506
Query: 313 LAQKID 318
L ++D
Sbjct: 507 LFMEMD 512
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 136/296 (45%), Gaps = 5/296 (1%)
Query: 6 LKQELPDFNRLIDTL-CKSRH---VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
L LP F+ + KS H ++ A F+++ P I + LL + K+
Sbjct: 22 LSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHY 81
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
++ + +M G P+V + I+IN+ C R A + ++ +P P F TL
Sbjct: 82 STVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTL 141
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I GL E ++ EAL F + GF+P TY ++ C + A R++ M +
Sbjct: 142 IRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNC 201
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ Y ++ L K + EA+++F +M + G P + TY +V C +
Sbjct: 202 QPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ-GISPDIFTYTSLVHALCNLCEWKHVT 260
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ ++M +LP + ++ST++++LC E K+ +A + M+ G+ P ++ L
Sbjct: 261 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 316
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + LI+ CK +++A +F++M ++ + PD K+Y L+ G
Sbjct: 336 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGR 395
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM G PD+V+Y I++++ C + +EA+ L + +EA+N P ++
Sbjct: 396 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNI 455
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G+ L A F +G P TYN ++ C +N+A ++ EM
Sbjct: 456 IIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 515
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
P+ TY+ + ++ T A + + M
Sbjct: 516 CSPDGCTYNTIARGFLQNNETLRAIQLLEEM 546
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+ ++PD ++ L+D+LCK+RH+E A + ++ +PDI+ Y I+++G + L +
Sbjct: 409 RGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 468
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+++ + G P V +Y IMI+ C +EA +LF EM+ +C P + T+
Sbjct: 469 ARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIAR 528
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEA 150
G A+Q + RGF ++
Sbjct: 529 GFLQNNETLRAIQLLEEMLARGFSADS 555
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K+ +PD +N L+ LC ++ A +F +M R PD+ +Y+ILL+ + ++L
Sbjct: 374 KEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEE 433
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ + ++ PD+ Y I+I+ C A + A +LF + + PS + +I+
Sbjct: 434 AMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIH 493
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL L+EA + F + P+ TYN + + + A ++++EM G
Sbjct: 494 GLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSA 553
Query: 184 NT 185
++
Sbjct: 554 DS 555
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 159/302 (52%), Gaps = 7/302 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPD----IKSYTILLEGWGQQKNLLSMNEVY 68
F L+D+LCK HV A E FD+ +R DP I+ Y +LL GW + + L +++
Sbjct: 217 FKILLDSLCKEGHVRVASEYFDQ--QRGLDPSWVPSIRVYNVLLNGWFRSRKLKRAEQLW 274
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
R MK + +P VV+YG ++ +C +R ++A+EL EM +P+ ++ +I+ L
Sbjct: 275 RTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEA 334
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
R EA+ + P TYN++V +C + + A +++ M G P TY
Sbjct: 335 GRFKEAMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTY 394
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ + + G+TEE +++ +M + G P TY ++++M C ++D+A+++ EM+
Sbjct: 395 NYFFRYFSRCGKTEEGMNLYTKMI-ESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMR 453
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
ARG + + L++ LC +L++A F++M+ GI P F + ALR G+ E
Sbjct: 454 ARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFERMNNALRKRGLTE 513
Query: 309 TA 310
A
Sbjct: 514 MA 515
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 16/329 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQE-VFDKMKKRRFDPDIKS---YTILLEGWG 56
M + G + + FN +ID L KSR + A V D+++ +P++ S + +L+ +
Sbjct: 128 MKQPGFESSMTLFNSMIDVLAKSRAFDSAWLLVLDRIEGGE-EPELVSSNTFAVLIRRYA 186
Query: 57 QQKNLLSMNEVYR------EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
+ LS + ++D E + + I++++ C A E F + +
Sbjct: 187 RAGMTLSAIRTFEFAFSLDSIRDRDSEWSL--FKILLDSLCKEGHVRVASEYFDQQRGLD 244
Query: 111 CK--PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
PS ++ L+NG ++L A Q + K+ +P TY +V YC R
Sbjct: 245 PSWVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEK 304
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A ++ EMR GI PN Y+ ++ L +AGR +EA + +R T PT+STY +V
Sbjct: 305 AIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMER-CLVSETGPTISTYNSLV 363
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+ FC + A ++ M +RG P + Y+ K ++ + +M++ G
Sbjct: 364 KGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHT 423
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKI 317
P + L + + +E + AV +++++
Sbjct: 424 PDRLTYHLLIKMMCEEERLDLAVQVSKEM 452
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L +N + E ++ KM + PD +Y +L++ +++ L
Sbjct: 386 GFDPTLTTYNYFFRYFSRCGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEEERLDLA 445
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V +EM+ G + D+ + ++++ C R +EA F +M P F + N
Sbjct: 446 VQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEFEDMIRRGIVPQYLTFERMNNA 505
Query: 125 L 125
L
Sbjct: 506 L 506
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 163/311 (52%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + + ++ LID+LC+ R V A ++F MK + PDI +YT L++G +
Sbjct: 224 MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSR 283
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM PD+V++ ++++ C + EA+ + + M +P+ + +
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSS 343
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ G + EA + F +G +P +YN ++ YC + RI++A ++ +EM G
Sbjct: 344 LMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG 403
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN +Y+ ++H + G+ EA +F+ M G P + TY I++ FC + A
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTN-GNLPDLFTYSILLDGFCKQGYLGKA 462
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ M++ + P + MY+ L++++C DA K F E+ G++P QL++ +
Sbjct: 463 FRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIING 522
Query: 301 LRDEGMEETAV 311
L EG+ + A+
Sbjct: 523 LCKEGLLDEAL 533
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL + + ++ C+ + V+ V K+ K P I ++T L+ G +
Sbjct: 119 MELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGE 178
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E++ +M G +PDV +Y +IN C A L ++ME C+P+ + T
Sbjct: 179 FAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYST 238
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L ++ ++EAL F K +G P+ TY +++ C R +A +++EM
Sbjct: 239 LIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN 298
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ T+++++ K G+ EA V K M+ G EP V TY ++ + V A
Sbjct: 299 IMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEM-GVEPNVVTYSSLMYGYSLWTDVVEA 357
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M +G P + Y+ LIN C ++D+A + F EM+ G+ P ++ L
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417
Query: 301 LRDEG 305
G
Sbjct: 418 FCQLG 422
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 5/293 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + ++ FN L+DT CK V A V M + +P++ +Y+ L+ G+ +
Sbjct: 294 MTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTD 353
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +++ M G +P++ SY I+IN +C AKR DEA++LF EM P+ + T
Sbjct: 354 VVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNT 413
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +L EA F G P+ TY+ ++ +C + A+R+ M+
Sbjct: 414 LIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTY 473
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y I++H + K+G ++A +F + + G +P V Y ++ C +D A
Sbjct: 474 LKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQ-GLQPHVQLYTTIINGLCKEGLLDEA 532
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG----IRP 289
+ + M+A G P Y+ +I L A EM D G +RP
Sbjct: 533 LEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRP 585
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 132/277 (47%), Gaps = 6/277 (2%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEG---WGQQKNLLSMNEVYREMKDDGFEPDV 80
R+++ A F+ M R+ P I + LL GQ +++ + ++M+ G P++
Sbjct: 71 RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVI--SLSKQMELVGLSPNI 128
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
+ I +N C +R D + ++ +P+ F TLINGL ++A++ F
Sbjct: 129 YTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDD 188
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
+G +P+ TYN ++ C A ++ +M + G PN TY ++ L +
Sbjct: 189 MVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRL 248
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
EA +F M K G P + TY +++ C ++ A + +EM + ++P + ++
Sbjct: 249 VNEALDIFSYMKAK-GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFN 307
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
L+++ C E K+ +A + M ++G+ P +S+L
Sbjct: 308 VLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSL 344
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 2/250 (0%)
Query: 78 PDVVSYGIMINAHCS-AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
P ++ + +++A + YD + L ++ME P+ + +N +R+
Sbjct: 90 PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFS 149
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
+ K G +P T+ ++ C A + D+M G P+ TY+ +++ L
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC 209
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K G T A + K+M + G +P + TY ++ C + V+ A+ I+ MKA+G+ P +
Sbjct: 210 KIGETAAAAGLLKKM-EEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDI 268
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
Y++LI LC + +A EM + I P F+ L EG A+ + +
Sbjct: 269 FTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKT 328
Query: 317 IDKLRKTPLV 326
+ ++ P V
Sbjct: 329 MTEMGVEPNV 338
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 162/311 (52%), Gaps = 7/311 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G + + F L+D LCK+ V+ A +F+ M+ R+ P +K +T LL GW ++
Sbjct: 218 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR-YRWKPSVKHFTSLLYGWCKEGK 276
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V +MKD G EPD+V Y ++ + A + +A +L +EM C+P+ +
Sbjct: 277 LMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTV 336
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L +RL EA + F + + G + + TY+ ++ +C +I Y ++DEM + G
Sbjct: 337 LIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQG 396
Query: 181 IGPNTRTYD-IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
PN Y I+L H K E V + +K G P +S Y V+R+ C +V
Sbjct: 397 HFPNQVIYQHIMLAHEKKEELEECKELVNE--MQKIGCAPDLSIYNTVIRLACKLGEVKE 454
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP---GQLFSN 296
+++W+EM++ G+ P M + +IN + L +AC+YF+EM+ G+ G L
Sbjct: 455 GIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKEL 514
Query: 297 LKQALRDEGME 307
+ LR E +E
Sbjct: 515 MNSLLRAEKLE 525
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 149/318 (46%), Gaps = 7/318 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI---KSYTILLEGWGQQKNLLSMNEVYR 69
+ +I L + R + ++M R+ +P + + + IL+ + + + EV
Sbjct: 159 YKAMIKVLSRMRQFGAVWALIEEM--RQENPHLITPQVFVILMRRFASARMVHKAVEVLD 216
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM G EPD +G +++A C EA LF +M KPS F +L+ G E
Sbjct: 217 EMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR-YRWKPSVKHFTSLLYGWCKEG 275
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L EA Q K G EP+ YN ++G Y + ++ DAY ++ EMR+ PN +Y
Sbjct: 276 KLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYT 335
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ L K R EEA +F M + G + V TY ++ FC ++ + DEM
Sbjct: 336 VLIQSLCKHERLEEATRLFVEM-QTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQ 394
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G P +Y ++ + +++L++ + EM IG P +++ + + G +
Sbjct: 395 QGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKE 454
Query: 310 AVVLAQKIDKLRKTPLVD 327
+ L +++ +P +D
Sbjct: 455 GIQLWNEMESSGLSPGMD 472
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 133/270 (49%), Gaps = 9/270 (3%)
Query: 34 DKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS---YGIMINAH 90
K R D D +Y +++ + + ++ + EM+ + P +++ + I++
Sbjct: 147 SKQSGHRLDHD--AYKAMIKVLSRMRQFGAVWALIEEMRQEN--PHLITPQVFVILMRRF 202
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
SA+ +AVE+ EM C+P ++F L++ L + EA F + R ++P
Sbjct: 203 ASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYR-WKPSV 261
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
+ +++ +C ++ +A ++ +M+ GI P+ Y+ +L +AG+ +AY + K
Sbjct: 262 KHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKE 321
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M RK EP ++Y ++++ C + +++ A R++ EM+ G + YSTLI+ C
Sbjct: 322 MRRKR-CEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWG 380
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
K+ + EM+ G P ++ ++ A
Sbjct: 381 KIKRGYELLDEMIQQGHFPNQVIYQHIMLA 410
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 150/293 (51%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I CK + ++ A ++ M +P++ +Y +++ G + + + V EM
Sbjct: 241 YNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD 300
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF PD V+Y ++N +C + +A+ L EM P + +LIN + L+
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLN 360
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A++FF Q RG P TY +++ + +++AYR+ DEM + G P TY+ +L
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ +GR EEA + + M K G P V +Y ++ FC ++D A ++ EM +GV
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGK-GLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV 479
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P YS+LI LC + +L++AC FQEML+ + P +++L EG
Sbjct: 480 SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEG 532
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 177/380 (46%), Gaps = 59/380 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ + LI+T+CK+ ++ RA E FD+M R P+ +YT L+ G+ Q+
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKG- 392
Query: 61 LLSMNEVYR---EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP---- 113
M+E YR EM GF P +V+Y ++N HC + R +EA+ L R ME P
Sbjct: 393 --FMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVS 450
Query: 114 -----------------------------SPH--IFCTLINGLGSEKRLSEALQFFGQSK 142
SP + +LI GL ++RL+EA F +
Sbjct: 451 YSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEML 510
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+ P+ TY +++ YC +N+A + DEM K G P+T TY+++++ L K RT
Sbjct: 511 NKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTR 570
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVV---------------RMFCYNAQVDMAMRIWDEM 247
EA + ++ P TY+ ++ + FC ++ A ++++ M
Sbjct: 571 EAKRLLLKLFYDESI-PNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESM 629
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
R P +Y+ +I+ C + + A K ++EM+D G P L +AL EGM+
Sbjct: 630 IKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMD 689
Query: 308 ETAVVLAQKIDKLRKTPLVD 327
E ++ + D LR L D
Sbjct: 690 EQLNLVIR--DILRSCKLSD 707
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ L +N +I+ LC+ +E V +M ++ F PD +Y L+ G+ + N
Sbjct: 268 GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQA 327
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM +G PDVV+Y +IN C A + A+E F +M +P+ + +LING
Sbjct: 328 LVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLING 387
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + EA + + + + GF P TYNA++ +C S R+ +A ++ M G+ P+
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y ++ + + A+ + M K G P TY +++ C +++ A ++
Sbjct: 448 VVSYSTIIAGFCRYQELDRAFQMNAEMVEK-GVSPDAITYSSLIQGLCEQRRLNEACDLF 506
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM + +LP Y++LIN C E L++A EM+ G P ++ L L +
Sbjct: 507 QEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQ 566
Query: 305 GMEETAVVLAQKI 317
A L K+
Sbjct: 567 ARTREAKRLLLKL 579
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + +N ++D++ + R V A++V+ +M ++ SY IL+ G+ NL
Sbjct: 162 GFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEM 221
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ EM+ + P+VV+Y +I A+C KR DEA +L R M +P+ + +IN
Sbjct: 222 GLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN 281
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL R+ E + ++GF P+ TYN +V YC + A + EM + G+ P
Sbjct: 282 GLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPP 341
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY +++ + KAG A F +M + G P TY ++ F +D A RI
Sbjct: 342 DVVTYTSLINTMCKAGNLNRAMEFFDQMHVR-GLRPNGVTYTSLINGFSQKGFMDEAYRI 400
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
WDEM G P + Y+ L+N C ++++A + M G+ P
Sbjct: 401 WDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP 446
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 2/313 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ-QKNLLSMNEVYREM 71
F+ ++ + +E+A + D K F P + SY +L+ + +K ++ +VYREM
Sbjct: 135 FDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREM 194
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G +V SY I+I C+A + + F EME C P+ + T+I KR+
Sbjct: 195 IASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRI 254
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA + G EP TYN V+ C RI + ++ EM + G P+ TY+ +
Sbjct: 255 DEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTL 314
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ K G +A + M R G P V TY ++ C ++ AM +D+M RG
Sbjct: 315 VNGYCKVGNFHQALVLHSEMLRN-GLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ P Y++LIN + +D+A + + EM+ G P ++ L G E A+
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433
Query: 312 VLAQKIDKLRKTP 324
L + ++ +P
Sbjct: 434 GLLRGMEGKGLSP 446
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 2/204 (0%)
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR-INDA 169
C S +F ++ + +AL +K GF P +YNA++ + + + A
Sbjct: 128 CNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFA 187
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
++ EM G+ N +Y+I++ AG E F+ M R P V TY V+
Sbjct: 188 EKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNR-CLPNVVTYNTVIG 246
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+C ++D A ++ M G+ P + Y+ +IN LC ++++ EM G P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306
Query: 290 PGQLFSNLKQALRDEGMEETAVVL 313
G ++ L G A+VL
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVL 330
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 149/300 (49%), Gaps = 1/300 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G+ + +N LID CK + V+ A + M ++ SY ++ G +
Sbjct: 233 MEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGR 292
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ EM+ G PD V+Y ++N C + + L EM P+ + T
Sbjct: 293 MSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTT 352
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN + LS A++ F Q + RG P TY ++ +C +N+AY+++ EM G
Sbjct: 353 LINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG 412
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++H GR +EA + + M + G P V +Y V+ FC ++ A
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVER-GLPPDVVSYSTVIAGFCRERELGKA 471
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ +EM +GVLP YS+LI LC + KL +A F+EM+ G+ P +++L A
Sbjct: 472 FQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINA 531
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 151/313 (48%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ L +N +I+ LC + E+ ++M+ + PD +Y L+ G+ ++ NL
Sbjct: 272 GVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQG 331
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM G P+VV+Y +IN C A AVE+F +M +P+ + TLI+G
Sbjct: 332 LVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDG 391
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++EA + + GF P TYNA+V YC+ R+ +A ++ M + G+ P+
Sbjct: 392 FCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPD 451
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y V+ + +A+ + + M K G P TY +++ C ++ A ++
Sbjct: 452 VVSYSTVIAGFCRERELGKAFQMKEEMVEK-GVLPDTVTYSSLIQGLCLQQKLVEAFDLF 510
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM RG+ P Y++LIN+ C + +L A + EM+ G P +S L L +
Sbjct: 511 REMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKK 570
Query: 305 GMEETAVVLAQKI 317
+ A L K+
Sbjct: 571 ARTKVAKRLLLKL 583
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N +I + +E+ KM+K P++ +Y L++ ++K
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R M G +++SY +IN C R E EL EM P + T
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG E L + L + +G P TY ++ C + ++ A + D+MR G
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN RTY ++ + G EAY V M G P+V TY +V +C+ +V A
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVS-GFSPSVVTYNALVHGYCFLGRVQEA 436
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I M RG+ P + YST+I C E +L A + +EM++ G+ P +S+L Q
Sbjct: 437 VGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQG 496
Query: 301 L 301
L
Sbjct: 497 L 497
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 163/375 (43%), Gaps = 57/375 (15%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI+ +CK+ ++ RA E+FD+M+ R P+ ++YT L++G+ Q+ M
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKG---LM 398
Query: 65 NEVYR---EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR----------------- 104
NE Y+ EM GF P VV+Y +++ +C R EAV + R
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTV 458
Query: 105 ------------------EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
EM P + +LI GL +++L EA F + +RG
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P+ TY +++ AYC ++ A R+ DEM + G P+ TY ++++ L K RT+ A
Sbjct: 519 PPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKR 578
Query: 207 VFKRMSRKPGTEPTVS--------------TYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ ++ + V+ + E +V+ FC ++ A R++ M R
Sbjct: 579 LLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH 638
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P +Y+ +I+ + A + E+ L +AL EGM +
Sbjct: 639 KPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSR 698
Query: 313 LAQKIDKLRKTPLVD 327
L Q I LR L D
Sbjct: 699 LLQNI--LRSCRLND 711
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 7/249 (2%)
Query: 75 GFEPDVVSYGIMINA-----HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
GF P V+SY +++A + + YD+A +FR+M P+ + + +I G+ S+
Sbjct: 162 GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQG 221
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
L + L F + +K G P TYN ++ A C ++ +A ++ M G+ N +Y+
Sbjct: 222 DLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYN 281
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
V++ L GR E + + M R G P TY +V FC + + + EM
Sbjct: 282 SVINGLCGKGRMSEVGELVEEM-RGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVG 340
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEE 308
+G+ P + Y+TLIN +C L A + F +M G+RP + ++ L +G M E
Sbjct: 341 KGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNE 400
Query: 309 TAVVLAQKI 317
VL++ I
Sbjct: 401 AYKVLSEMI 409
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 130/307 (42%), Gaps = 16/307 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ ++ +I C+ R + +A ++ ++M ++ PD +Y+ L++G Q+ L+
Sbjct: 447 GLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEA 506
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++REM G PD V+Y +INA+C +A+ L EM P + LING
Sbjct: 507 FDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLING 566
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYN---------------AVVGAYCWSMRINDA 169
L + R A + + P+ TYN +V +C +N+A
Sbjct: 567 LNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEA 626
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
R+ M + PN Y++++H + G +AY+++ + TV+ + V+
Sbjct: 627 DRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIAL-VK 685
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D R+ + L + L+ E +D EM G+ P
Sbjct: 686 ALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLP 745
Query: 290 PGQLFSN 296
G + S+
Sbjct: 746 DGGIHSS 752
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 130/307 (42%), Gaps = 30/307 (9%)
Query: 41 FDPDIKSYTILLEGWGQQK---NLLSMNEVYREMKDDGFEPD--------VVSYGIMINA 89
F P SY +LL Q+ N L+ + + + F P +V + + A
Sbjct: 37 FTPQAASY-VLLNSQSDQRTLLNFLTWAQAQAQAHNFFFTPHCKCLALHILVRFKLYRTA 95
Query: 90 HCSAKRYDEAV------ELFREMEATN--CKP---SPHIFCTLINGLGSEKRLSEALQFF 138
H A + LFR + T C S +F ++ L + +AL
Sbjct: 96 HSLAADLAATLPDPTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLL 155
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRIN-----DAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ + GF P +YNAV+ A N DA R+ +M + G+ PN TY++++
Sbjct: 156 HLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIR 215
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
++ G E+ ++M K G P V TY ++ C +V AM + M GV
Sbjct: 216 GVVSQGDLEKGLGFMRKM-EKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVA 274
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVV 312
+ Y+++IN LC + ++ + + +EM G+ P ++ L EG + + V+
Sbjct: 275 ANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVL 334
Query: 313 LAQKIDK 319
L++ + K
Sbjct: 335 LSEMVGK 341
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/261 (19%), Positives = 108/261 (41%), Gaps = 21/261 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LI+ C + +A + D+M +R F PD +Y++L+ G ++
Sbjct: 513 MMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKAR 572
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + PD V+Y +I +CS F+ +E
Sbjct: 573 TKVAKRLLLKLFYEESVPDDVTYNTLIE-NCSNNE-------FKSVEG------------ 612
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ G + ++EA + F +R +P A YN ++ + ++ AY + E+
Sbjct: 613 LVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSS 672
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+T ++ L + G +E + + + R +++V + +D
Sbjct: 673 FACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDA-KVAKVLVEVNFKEGNMDAV 731
Query: 241 MRIWDEMKARGVLPVMHMYST 261
+ + EM G+LP ++S+
Sbjct: 732 LNVLTEMAKDGLLPDGGIHSS 752
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 170/317 (53%), Gaps = 2/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++ + N L+D L +++ + AQ +F+K++ R F P++++YT+LL GW + KN
Sbjct: 329 MKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVLLNGWCRIKN 387
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ + EM D GF+PD++++ M+ K+ +A++LF M+A P+ +
Sbjct: 388 LVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTI 447
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + ++ EA+++F + G +P+A Y ++ + +++ Y ++ EM++ G
Sbjct: 448 LIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKG 507
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ RTY+ ++ + ++A ++K+M + G + T+ TY ++++ + Y +M
Sbjct: 508 CPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQN-GIQSTLHTYNMMMKSYFYTRNYEMG 566
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+W+EM +G P + Y I L + ++AC+Y +EM++ G++ P ++
Sbjct: 567 CAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAAD 626
Query: 301 LRDEGMEETAVVLAQKI 317
G + LA+K+
Sbjct: 627 FSRAGKPDILEELARKM 643
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 106/273 (38%), Gaps = 74/273 (27%)
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE--ALQFF-GQSKKRGFEPEAPTY 153
DE L R MEA + + + L+ G+ + + A +FF +K GF + TY
Sbjct: 213 DELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTY 272
Query: 154 NAVVGAYCWSMRINDAYRMMDEM-----------------------RKCGIG-------- 182
NA++ + + M+ EM RK +G
Sbjct: 273 NAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFELMKRY 332
Query: 183 ---PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
T + +L +L +A +EA ++F+++ + P + TY +++ +C +
Sbjct: 333 NFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR--FTPNLRTYTVLLNGWCRIKNLVE 390
Query: 240 AMRIWDE-----------------------------------MKARGVLPVMHMYSTLIN 264
A R W+E MKA+G P + Y+ LI
Sbjct: 391 AGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIR 450
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
LC + K+ +A +YF EM+D G +P +++ L
Sbjct: 451 DLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCL 483
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 168/316 (53%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+ K + N L+D+L +++ + AQ +FDK+K+R F P++ +YT+LL GW + +N
Sbjct: 254 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRN 312
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++ +M D G +PD+V++ +M+ + + +A++LF M++ P+ +
Sbjct: 313 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 372
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I + + A+++F G +P+A Y ++ + +++ Y ++ EM++ G
Sbjct: 373 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 432
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +TY+ ++ + E ++ +M + EP++ T+ ++++ + +M
Sbjct: 433 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMG 491
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+WDEM +G+ P + Y+ LI L E K +AC+Y +EMLD G++ P ++
Sbjct: 492 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 551
Query: 301 LRDEGMEETAVVLAQK 316
G E LAQ+
Sbjct: 552 FHRGGQPEIFEELAQR 567
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 146/304 (48%), Gaps = 5/304 (1%)
Query: 16 LIDTLCKSRHVERAQEVFD--KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
+++ L + RH + F +++ F D ++Y ++ + + +M V EM
Sbjct: 163 IVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGT 222
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G + ++ I + A +AK +AV +F M+ K L++ LG K E
Sbjct: 223 KGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKE 281
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A F + K+R F P TY ++ +C + +A R+ ++M G+ P+ ++++L
Sbjct: 282 AQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLE 340
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+++ + +A +F M K G P V +Y I++R FC + ++ A+ +D+M G+
Sbjct: 341 GLLRSMKKSDAIKLFHVMKSK-GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P +Y+ LI + KLD + +EM + G P G+ ++ L + + ++ M E +
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 314 AQKI 317
K+
Sbjct: 460 YNKM 463
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 168/316 (53%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+ K + N L+D+L +++ + AQ +FDK+K+R F P++ +YT+LL GW + +N
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRN 313
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++ +M D G +PD+V++ +M+ + + +A++LF M++ P+ +
Sbjct: 314 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I + + A+++F G +P+A Y ++ + +++ Y ++ EM++ G
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +TY+ ++ + E ++ +M + EP++ T+ ++++ + +M
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE-IEPSIHTFNMIMKSYFVARNYEMG 492
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+WDEM +G+ P + Y+ LI L E K +AC+Y +EMLD G++ P ++
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAAD 552
Query: 301 LRDEGMEETAVVLAQK 316
G E LAQ+
Sbjct: 553 FHRGGQPEIFEELAQR 568
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 145/304 (47%), Gaps = 5/304 (1%)
Query: 16 LIDTLCKSRHVERAQEVFD--KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
+++ L + RH + F +++ F ++Y ++ + + +M V EM
Sbjct: 164 IVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGT 223
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G + ++ I + A +AK +AV +F M+ K L++ LG K E
Sbjct: 224 KGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKE 282
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A F + K+R F P TY ++ +C + +A R+ ++M G+ P+ ++++L
Sbjct: 283 AQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLE 341
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+++ + +A +F M K G P V +Y I++R FC + ++ A+ +D+M G+
Sbjct: 342 GLLRSMKKSDAIKLFHVMKSK-GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P +Y+ LI + KLD + +EM + G P G+ ++ L + + ++ M E +
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 314 AQKI 317
K+
Sbjct: 461 YNKM 464
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 168/324 (51%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+D+ + ++ +N ++ +LC S +++A EV D+M +R PD+ +YTIL+E +
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+D G PDVV+Y +++N C R DEA++ +M ++ C+P+
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + S R +A + ++GF P T+N ++ C + A ++++M + G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ +Y+ +LH K + + A +RM + G P + TY ++ C + +V+ A
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I +++ ++G PV+ Y+T+I+ L K A K EM ++P +S+L
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG + A+ + +++ P
Sbjct: 494 LSREGKVDEAIKFFHEFERMGIRP 517
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 154/323 (47%), Gaps = 13/323 (4%)
Query: 10 LPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLS 63
+PD LI C+ +A ++ + ++ PD+ +Y +++ G+ G+ N LS
Sbjct: 134 VPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALS 193
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ + PDVV+Y ++ + C + + +A+E+ M +C P + LI
Sbjct: 194 V------LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ + A++ + + RG P+ TYN +V C R+++A + +++M G P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++I+L + GR +A + M RK G P+V T+ I++ C + A+ I
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++M G P Y+ L++ C E K+D A +Y + M+ G P ++ + AL
Sbjct: 367 LEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426
Query: 304 EGMEETAVVLAQKIDKLRKTPLV 326
+G E AV + ++ +P++
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVL 449
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 153/313 (48%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N L++ +CK ++ A + + M P++ ++ I+L +
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M GF P VV++ I+IN C A+++ +M C+P+ + L++G
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
EK++ A+++ + RG P+ TYN ++ A C ++ DA +++++ G P
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ V+ L KAG+T +A + M R +P TY +V +VD A++ +
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
E + G+ P +++++ LC + D A + M++ G +P ++ L + L E
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Query: 305 GMEETAVVLAQKI 317
GM + A+ L ++
Sbjct: 568 GMAKEALELLNEL 580
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 129/253 (50%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI+ LC+ + RA ++ +KM + P+ SY LL G+ ++K
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E M G PD+V+Y M+ A C + ++AVE+ ++ + C P + T
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + +A++ + + + +P+ TY+++VG ++++A + E + G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T++ ++ L K+ +T+ A M + G +P ++Y I++ Y A
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYEGMAKEA 573
Query: 241 MRIWDEMKARGVL 253
+ + +E+ +G++
Sbjct: 574 LELLNELCNKGLM 586
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 165/312 (52%), Gaps = 4/312 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ +N LI L + + V A ++F + ++ ++P++ +Y IL++G ++ +
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ + G EPD ++Y + I+ C A R ++A+ + ++M+ C P +ING
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 372
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L EKR+ EA + +G P A ++N ++ C + + A EM K G+ P
Sbjct: 373 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT 432
Query: 185 TRTYDIVLHHLIKA---GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
TY+I++ L KA GR +EA ++F M K G P V TY ++ ++D A
Sbjct: 433 VVTYNILVDGLCKARQEGRIKEAITLFDAMIEK-GRVPDVVTYSALIDGLGKAGKLDDAR 491
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R+ M+A+G +P ++ Y++LI+ LC DK+D+A + F M++ G P + + AL
Sbjct: 492 RLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISAL 551
Query: 302 RDEGMEETAVVL 313
+ M + A+ L
Sbjct: 552 CKQEMVDKALAL 563
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 152/300 (50%), Gaps = 4/300 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + E+P +N LID L K V A E+F + K +PD +YT+ ++G + +
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 347
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++M + G PDVVS+ +IN C KR DEA L MEA C P+ F TLI G
Sbjct: 348 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 407
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM---RINDAYRMMDEMRKCGI 181
+ +A+ F + KRG +P TYN +V C + RI +A + D M + G
Sbjct: 408 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGR 467
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY ++ L KAG+ ++A + M K G P V TY ++ C +VD A+
Sbjct: 468 VPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK-GCIPNVYTYNSLISGLCGLDKVDEAL 526
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ M +G +P Y T+I++LC ++ +D A F L+ G+ P ++ +L L
Sbjct: 527 ELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGL 586
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 140/281 (49%), Gaps = 4/281 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GL+ + + ID LCK+ VE A + M ++ PD+ S+ ++ G ++K +
Sbjct: 321 KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVD 380
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ M+ G P+ +S+ +I C A ++ +A+ F+EM KP+ + L+
Sbjct: 381 EAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILV 440
Query: 123 NGLG---SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+GL E R+ EA+ F ++G P+ TY+A++ + +++DA R++ M
Sbjct: 441 DGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 500
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN TY+ ++ L + +EA +F M K G P TY ++ C VD
Sbjct: 501 GCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEK-GCVPDTITYGTIISALCKQEMVDK 559
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
A+ ++D GV+P MY +LI+ LC ++D+A K Q
Sbjct: 560 ALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 5/290 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G +N L+ LC + AQ ++++M K + PD+ +Y LL G+ +
Sbjct: 76 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGK 135
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ GF PDVV+Y +IN C A + DEA + + M + + P + +
Sbjct: 136 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNS 195
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM-RINDAYRMMDEMRKC 179
L+NGL R+ EA +GF P TY+ ++ C + R+ A +++++M
Sbjct: 196 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ +Y+ ++H L + EA +F + R+ G EP V TY I++ +V+
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ-GYEPEVPTYNILIDGLLKEDRVNE 311
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A ++ + G+ P Y+ I+ LC +++DA ++M + G P
Sbjct: 312 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 361
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 149/317 (47%), Gaps = 5/317 (1%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ FN I LC++ + AQ VFD M+K F P+ +Y LL G + +Y
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
M G+ PDVV+Y +++ C + DEA+++F P + LING
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+L EA + + P+ TYN++V C + R+++A ++ + G PN TY
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVITY 225
Query: 189 DIVLHHLIK-AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++ L + R E A + ++M G +P + +Y ++ V A++++ +
Sbjct: 226 STLISGLCRELRRLESARQLLEKMVLN-GCKPDIVSYNALIHGLAREQGVSEALKLFGSV 284
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+G P + Y+ LI+ L ED++++A + F ++ G+ P ++ L G
Sbjct: 285 LRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 344
Query: 308 ETAVVLAQKIDKLRKTP 324
E A+++ + +D+ P
Sbjct: 345 EDALLMLKDMDEKGCVP 361
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 6/290 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ +L KS +E+A +++ + DI ++ I + G + + V+ M+ G
Sbjct: 22 LLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHG 80
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F P+ ++Y +++ C+ R +A L+ M P + TL++G +L EAL
Sbjct: 81 FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEAL 140
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + KRGF P+ TYNA++ +C + ++++A R++ M + P+ TY+ +++ L
Sbjct: 141 KIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGL 200
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA-QVDMAMRIWDEMKARGVLP 254
K GR +EA + + G P V TY ++ C +++ A ++ ++M G P
Sbjct: 201 CKNGRVDEA----RMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ Y+ LI+ L E + +A K F +L G P ++ L L E
Sbjct: 257 DIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 121/246 (49%), Gaps = 4/246 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ G ++ N +I+ LCK + V+ A+ + M+ + P+ S+ L+ G +
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAK---RYDEAVELFREMEATNCKPSPHI 117
++EM G +P VV+Y I+++ C A+ R EA+ LF M P
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 473
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+GLG +L +A + G + +G P TYN+++ C ++++A + M
Sbjct: 474 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMV 533
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ G P+T TY ++ L K ++A ++F S + G PT Y ++ C A+V
Sbjct: 534 EKGCVPDTITYGTIISALCKQEMVDKALALFDG-SLEAGVVPTSGMYFSLIDGLCAVARV 592
Query: 238 DMAMRI 243
D A+++
Sbjct: 593 DEALKL 598
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 3/212 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G FN LI C++ ++A F +M KR P + +Y IL++G + +
Sbjct: 389 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ 448
Query: 61 LLSMNE---VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ E ++ M + G PDVV+Y +I+ A + D+A L MEA C P+ +
Sbjct: 449 EGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYT 508
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LI+GL ++ EAL+ F ++G P+ TY ++ A C ++ A + D
Sbjct: 509 YNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSL 568
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+ G+ P + Y ++ L R +EA + +
Sbjct: 569 EAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 160/324 (49%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + + LI++ C V A V K+ K PD ++T L+ G +
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +GF PDVV+YG +IN C A+ L M NC+P+ + T
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++++EA F + +G P+ TYN+++ A C +++EM
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ +++ V+ L K G+ EA+ V +M ++ G EP V TY ++ C +++D A
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR-GVEPNVVTYTALMDGHCLLSEMDEA 325
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M +G +P + Y+TLIN C ++D A F EM + P +S L
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 385
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L + A+ L ++ + P
Sbjct: 386 LCHVERLQDAIALFHEMVACSQIP 409
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 154/313 (49%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N LI LC + + ++M + PD+ S+ +++ ++ +
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V +M G EP+VV+Y +++ HC DEAV++F M C P+ + TLING
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+R+ +A+ FG+ ++ P+ TY+ ++ C R+ DA + EM C PN
Sbjct: 351 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 410
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+L +L K EA ++ K + +P + I + C +++ A ++
Sbjct: 411 LVTYRILLDYLCKNRYLAEAMALLKAI-EGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 469
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ ++G+ P + YS +IN LC LD+A K F+EM + G G +++ + +
Sbjct: 470 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 529
Query: 305 GMEETAVVLAQKI 317
A+ L Q++
Sbjct: 530 NETSRAIQLLQEM 542
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 148/303 (48%), Gaps = 4/303 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD FN ++D LCK V A +V DKM +R +P++ +YT L++G + +
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ M G P+V+SY +IN +C +R D+A+ LF EM P + TLI+GL
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 387
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+RL +A+ F + P TY ++ C + + +A ++ + + P+ +
Sbjct: 388 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 447
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+I + + +AG E A +F +S K G +P V TY I++ C +D A +++ E
Sbjct: 448 VNNIAIDGMCRAGELEAARDLFSNLSSK-GLQPDVWTYSIMINGLCRRGLLDEASKLFRE 506
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G +Y+T+ ++ A + QEM+ G + + L D+G+
Sbjct: 507 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 566
Query: 307 EET 309
+++
Sbjct: 567 DQS 569
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
Query: 22 KSRH---VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
KS H ++ A F++M + + P + LL + K+ ++ + +M G P
Sbjct: 35 KSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP 94
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
++ + I+IN+ C R A + ++ +P F TLI G+ E ++ EAL F
Sbjct: 95 NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLF 154
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+ GF P+ TY ++ C + A R++ M + PN Y+ ++ L K
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
+ EA+++F M K G P + TY ++ C + + +EM ++P +
Sbjct: 215 RQVTEAFNLFSEMVTK-GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++T++++LC E K+ +A +M+ G+ P
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 80/193 (41%), Gaps = 45/193 (23%)
Query: 7 KQEL-PD---FNRLIDTLCKSRHVERAQE---VFDKMKKRRFDPDIKSYTILL------- 52
+QEL PD ++ LI LC HVER Q+ +F +M P++ +Y ILL
Sbjct: 369 RQELIPDTVTYSTLIHGLC---HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 425
Query: 53 ----------------------------EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
+G + L + +++ + G +PDV +Y
Sbjct: 426 YLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS 485
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
IMIN C DEA +LFREM+ C + I+ T+ G S A+Q + R
Sbjct: 486 IMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 545
Query: 145 GFEPEAPTYNAVV 157
GF +A T V
Sbjct: 546 GFSADASTMTLFV 558
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 152/272 (55%), Gaps = 1/272 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I +LCK V+ A E+ + + PD+ ++ L++G N S +++ EMK
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMK 440
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD +Y ++I++ CS+++ +EA+ L +EME C + I+ TLI+G KR+
Sbjct: 441 GKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIE 500
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + + +G ++ TYN ++ C S R+ DA ++MD+M G+ P+ TY+ +L
Sbjct: 501 EAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLL 560
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H K G ++A + + M+ G P + TY ++ C +V +A R+ ++ +G+
Sbjct: 561 THFCKTGDIKKAADIVQTMT-SSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGM 619
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+ H Y+ +I +L ++ +A + F+EMLD
Sbjct: 620 VLTPHAYNPVIQALFKRNRTHEAMRLFREMLD 651
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 1/277 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
++ ++ FN LI LCK+ V A + ++M PD ++T +++G+ + NL
Sbjct: 199 IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL 258
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ +M + G V+ ++IN C R D+A+ +E + +P + TL+NGL
Sbjct: 259 RIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGL 318
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
A++ G +P+ TYN+++ C I +A +++D+M PN
Sbjct: 319 CKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNA 378
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ ++ L K R +EA + + ++ K G P V T+ +++ C ++ AM +++
Sbjct: 379 VTYNAIISSLCKENRVDEATEIARLLTSK-GILPDVCTFNSLIQGLCLSSNHKSAMDLFE 437
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
EMK +G P Y+ LI+SLC KL++A +EM
Sbjct: 438 EMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 142/313 (45%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N L++ LCK H + A EV D M DPDI +Y L+ G + +
Sbjct: 303 GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEA 362
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M P+ V+Y +I++ C R DEA E+ R + + P F +LI G
Sbjct: 363 VKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A+ F + K +G P+ TYN ++ + C S ++ +A ++ EM G N
Sbjct: 423 LCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARN 482
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ ++ K R EEA +F M + + +V TY ++ C + +V+ A ++
Sbjct: 483 VVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSV-TYNTLIDGLCKSKRVEDAAQLM 541
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M G+ P Y++L+ C + A Q M G P ++ L L
Sbjct: 542 DQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKA 601
Query: 305 GMEETAVVLAQKI 317
G + A L + I
Sbjct: 602 GRVQVASRLLRSI 614
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 1/317 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D++ +K + +N L++ L + ++ + M +RR D+ ++ IL++ + +
Sbjct: 160 DEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQV 219
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ EM G PD ++ ++ + D A+ + +M C + L
Sbjct: 220 RPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVL 279
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
ING + R+ +AL F ++ GF P+ TYN +V C A ++D M G+
Sbjct: 280 INGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGL 339
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY+ ++ L K G EEA + +M + P TY ++ C +VD A
Sbjct: 340 DPDIYTYNSLISGLCKLGEIEEAVKILDQMVSR-DCSPNAVTYNAIISSLCKENRVDEAT 398
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I + ++G+LP + +++LI LC A F+EM G RP ++ L +L
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458
Query: 302 RDEGMEETAVVLAQKID 318
E A+ L ++++
Sbjct: 459 CSSRKLEEALNLLKEME 475
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 117/256 (45%), Gaps = 2/256 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID+LC SR +E A + +M+ ++ Y L++G+ + K + E++ EM+
Sbjct: 451 YNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 510
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G D V+Y +I+ C +KR ++A +L +M +P + +L+ +
Sbjct: 511 LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIK 570
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A G P+ TY ++ C + R+ A R++ ++ G+ Y+ V+
Sbjct: 571 KAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVI 630
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY-NAQVDMAMRIWDEMKARG 251
L K RT EA +F+ M K P TY+IV R C + A+ EM RG
Sbjct: 631 QALFKRNRTHEAMRLFREMLDK-SEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERG 689
Query: 252 VLPVMHMYSTLINSLC 267
+P + L LC
Sbjct: 690 NIPEFSSFVMLAEGLC 705
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 6/314 (1%)
Query: 11 PDFN--RLIDTLCKSRHVERAQEVFD-KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PDF +LI+TL + A VF+ K+ F P Y +L G+ + M V
Sbjct: 60 PDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRV 119
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFCTLINGLG 126
EMK G E D + I + ++ + YDE V + + ME KP + L+N L
Sbjct: 120 LEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLV 179
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+L +R + T+N ++ A C + ++ A MM+EM G+ P+
Sbjct: 180 DANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDET 239
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T+ ++ I+ G + A + ++M G T T +++ FC ++D A+ E
Sbjct: 240 TFTTIMQGYIEGGNLDGALRIKEQMVEY-GCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG- 305
+ G P Y+TL+N LC A + ML G+ P +++L L G
Sbjct: 299 AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGE 358
Query: 306 MEETAVVLAQKIDK 319
+EE +L Q + +
Sbjct: 359 IEEAVKILDQMVSR 372
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + + +N LID CK++ +E A+E+FD+M+ + D +Y L++G + K
Sbjct: 474 MELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKR 533
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +G PD +Y ++ C +A ++ + M ++ C P + T
Sbjct: 534 VEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYAT 593
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL R+ A + + +G YN V+ A R ++A R+ EM
Sbjct: 594 LISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKS 653
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P+ TY IV L G EA M + G P S++ ++ C + D
Sbjct: 654 EPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIER-GNIPEFSSFVMLAEGLCTLSMDDT 712
Query: 240 AMRIWD 245
+++ D
Sbjct: 713 LVKLVD 718
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 157/315 (49%), Gaps = 1/315 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N L++ LCK +E A ++ K+ PD+ +YT L++G G++K
Sbjct: 64 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEA 123
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++EM G D V Y +I A + +A +++ M + C P T+I+G
Sbjct: 124 YKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDG 183
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ A++ F + RG P Y+A++ C + +++ A M+ +M+K P+
Sbjct: 184 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 243
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+I++ L K+G A + F M + G +P V TY I++ FC D A ++
Sbjct: 244 TITYNILIDGLCKSGDVAAARAFFDEM-LEAGCKPDVYTYNILISGFCKAGNTDAACGVF 302
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M + P + Y TLI+ LC +L A Y+Q M + G P ++S+L L
Sbjct: 303 DDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKS 362
Query: 305 GMEETAVVLAQKIDK 319
G E +L ++++
Sbjct: 363 GKLEGGCMLFDEMER 377
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 136/283 (48%), Gaps = 1/283 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + LID L K + A ++F +M R D YT L+ G Q +
Sbjct: 99 GCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQA 158
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ VY+ M G PDVV+ MI+ C A R AV +F+ MEA P+ ++ LI+G
Sbjct: 159 SSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 218
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +++ AL+ Q KK P+ TYN ++ C S + A DEM + G P+
Sbjct: 219 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPD 278
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I++ KAG T+ A VF MS P V TY ++ C Q+ A +
Sbjct: 279 VYTYNILISGFCKAGNTDAACGVFDDMSSSR-CSPNVVTYGTLISGLCKRRQLTKASLYY 337
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
MK RG P +YS+L++ LC KL+ C F EM G+
Sbjct: 338 QHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 380
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 134/247 (54%), Gaps = 3/247 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL ++ LI LCK+R ++ A E+ +MKK PD +Y IL++G + +
Sbjct: 200 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 259
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EM + G +PDV +Y I+I+ C A D A +F +M ++ C P+ + T
Sbjct: 260 VAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGT 319
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL ++L++A ++ K+RG P++ Y+++V C S ++ + DEM + G
Sbjct: 320 LISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG 379
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N++T ++ HL KA R +EA S+F + RK G P Y ++ + +V+
Sbjct: 380 VA-NSQTRTRLIFHLCKANRVDEAVSLFNAI-RKEGM-PHPYAYNSIISALIKSGKVNEG 436
Query: 241 MRIWDEM 247
++ EM
Sbjct: 437 QAVYQEM 443
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 141/314 (44%), Gaps = 1/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LI+ L K+ + +A + + DI +YT +++ + K + + ++
Sbjct: 2 FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G P + +Y ++N C R +EA++L R++ C P + +LI+GLG +KR
Sbjct: 62 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + RG + Y A++ + +I A + M G P+ T ++
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KAGR A +FK M + G P Y ++ C ++D A+ + +MK
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P Y+ LI+ LC + A +F EML+ G +P ++ L G + A
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300
Query: 313 LAQKIDKLRKTPLV 326
+ + R +P V
Sbjct: 301 VFDDMSSSRCSPNV 314
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+++IL+ G + L+ + + +E +G D+ +Y +++ K+ EAV L ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
A C P+ + L+NGL RL EA+ + G P+ TY +++ R
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+AY++ EM G+ +T Y ++ L++AG+ +A SV+K M+ + G P V T
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ-GCVPDVVTLST 179
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ C ++ A+RI+ M+ARG+ P +YS LI+ LC K+D A + +M
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 235
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 161/313 (51%), Gaps = 2/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL+ ++ +I LCK VF+ M K+ ++ YT L++ +G+ N
Sbjct: 321 MEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGN 380
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ MK +GFEPD V+YG+++N C + R DEAVE F + + + +
Sbjct: 381 VNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSS 440
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GLG R+ EA +FF + +RG ++ YNA++ A S ++ +A + M K G
Sbjct: 441 LIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEG 500
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TY I++ L K R EEA ++ M K G PT +++ + C + +V A
Sbjct: 501 CDQTVYTYTILISGLFKEHRNEEALKLWDLMIDK-GITPTTASFRALSVGLCLSGKVARA 559
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+I DE+ GV+P + +IN LC + + ACK ++D G PG++ + L A
Sbjct: 560 CKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINA 618
Query: 301 LRDEGMEETAVVL 313
LR G + A+ L
Sbjct: 619 LRKAGNADLAMKL 631
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 146/306 (47%), Gaps = 1/306 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N LI + VE V+ +MK+ +P + ++ LL G + S V+ M+
Sbjct: 194 NSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMEC 253
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
PDVVSY MI +C A +A+E F +ME N +P + TLI SE
Sbjct: 254 GKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDS 313
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
L + + ++RG E Y+ V+G C R + + + M K G N Y ++
Sbjct: 314 CLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALID 373
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
K G EA ++F+RM + G EP TY ++V C + ++D A+ ++ K V
Sbjct: 374 AYGKNGNVNEAINLFERM-KGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVA 432
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
YS+LI+ L ++D+A K+F+EM++ G ++ L AL G E A+VL
Sbjct: 433 VNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVL 492
Query: 314 AQKIDK 319
++++K
Sbjct: 493 FKRMEK 498
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 131/309 (42%), Gaps = 36/309 (11%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
K++ + I+ Y L++ + + ++ E K+ GF V + +I + +
Sbjct: 147 KQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMV 206
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+E + ++R M+ + +PS + F L+NGL + + A + F + P+ +YN +
Sbjct: 207 EELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTM 266
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRT----------------------------- 187
+ YC + A +M K + P+ T
Sbjct: 267 IKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGL 326
Query: 188 ------YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
Y +V+ L K GRT E SVF+ M++K G + V+ Y ++ + N V+ A+
Sbjct: 327 EIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKK-GCKANVAIYTALIDAYGKNGNVNEAI 385
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+++ MK G P Y ++N LC +LD+A +YF+ D + +S+L L
Sbjct: 386 NLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGL 445
Query: 302 RDEGMEETA 310
G + A
Sbjct: 446 GKAGRVDEA 454
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 164/324 (50%), Gaps = 5/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + FN LI C++ V+ A+++FDKM R F D+ SY L+EG +
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ EM +PD+ Y ++ C+A+R +E + + R M+ +PS +
Sbjct: 61 IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ E++ EA + + ++G P T AV+ AYC R++DA R+++ M+ G
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+ ++ G+ +A ++ +M R G P TY +++R C + ++ A
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKM-RACGVNPDAVTYNLLIRGQCIDGHIESA 235
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ M+ G++ + Y+ LIN+LC + + D AC F + GI+P F++L
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 295
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A +K+ TP
Sbjct: 296 LCKSGKADIAWKFLEKMVSAGCTP 319
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +I+ CK + A V + MK R P++ +Y L++G+ + +
Sbjct: 141 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 200
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M+ G PD V+Y ++I C + A L R ME + + LIN
Sbjct: 201 MTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 260
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R +A F + RG +P A T+N+++ C S + + A++ +++M G P+
Sbjct: 261 LCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPD 320
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY + HL K ++E S M +K +P+ Y IV+ + R W
Sbjct: 321 TYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD-VKPSTVNYTIVIHKLLKERNYGLVARTW 379
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM + G P + Y+T + + C E +L++A EM G+ ++ L
Sbjct: 380 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI 439
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G + AV + +++ + P
Sbjct: 440 GQTDHAVSILKQMTSVASVP 459
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 138/277 (49%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ LC + E + +MK+ + P ++Y +++ +++ E+ +EM
Sbjct: 79 YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMF 138
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P VV+ +INA+C R +A+ + M+ CKP+ + L+ G +E ++
Sbjct: 139 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 198
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ + + G P+A TYN ++ C I A+R++ M G+ + TY+ ++
Sbjct: 199 KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 258
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K GRT++A S+F + + G +P T+ ++ C + + D+A + ++M + G
Sbjct: 259 NALCKDGRTDQACSLFDSLETR-GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGC 317
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + YS+ I LC + + EML ++P
Sbjct: 318 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 354
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 126/323 (39%), Gaps = 18/323 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K FN LI+ LCKS + A + +KM PD +Y+ +E + K
Sbjct: 281 GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 340
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM +P V+Y I+I+ + Y + EM ++ C P + T +
Sbjct: 341 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 400
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E RL+EA + K G + YN ++ + + + A ++ +M PN
Sbjct: 401 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 460
Query: 185 TRTYDIVLHHLI-----------------KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
TY I+L HL+ KA + + +F M +K P TY +
Sbjct: 461 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM-KKNEFLPNSGTYSSI 519
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ F + + + A + MK + +Y+ L+ C + DA M+ G
Sbjct: 520 LEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGF 579
Query: 288 RPPGQLFSNLKQALRDEGMEETA 310
P + +L L EG + A
Sbjct: 580 IPQLMSYQHLLSGLICEGQTDKA 602
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 115/313 (36%), Gaps = 53/313 (16%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ +I L K R+ + +M +PD+ +YT + + + L
Sbjct: 352 VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 411
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN-- 123
V EM +G D ++Y +++ H S + D AV + ++M + P+ + L+
Sbjct: 412 NVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 471
Query: 124 ---------------GLGSEKRLSEALQFFGQSKKRGFEPEAPTYN-------------- 154
G+ L++ F KK F P + TY+
Sbjct: 472 VRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEE 531
Query: 155 ---------------------AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+V +C S R DA+ ++ M + G P +Y +L
Sbjct: 532 ATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLS 591
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
LI G+T++A +F SR P +++++ D++ + ++
Sbjct: 592 GLICEGQTDKAKEIFMN-SRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCR 650
Query: 254 PVMHMYSTLINSL 266
P Y+ L L
Sbjct: 651 PSHQTYAMLTEEL 663
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 163/311 (52%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ ++ +ID+LCK R V A ++F MK + P+I +Y L++G
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM P++V++ ++IN C EA + + M +P+ + +
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG + + EA + F +G +P+ +YN ++ YC + RI +A ++ +EM G
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y+ ++ L + GR EA+ +FK M G P + TY I++ FC + A
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN-GNLPDLCTYSILLDGFCKQGYLAKA 491
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ M++ + P M MY+ LI+++C L +A K F E+ G++P Q+++ +
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIING 551
Query: 301 LRDEGMEETAV 311
L EG+ + A+
Sbjct: 552 LCKEGLLDEAL 562
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 156/303 (51%), Gaps = 1/303 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GL+ + FN LI+ LCK +A E+FD M R + PD+ +YT ++ G + +
Sbjct: 185 KLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETV 244
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ ++R+M + G +PDVV+Y +I++ C +R +EA+++F M+A P+ + +LI
Sbjct: 245 AAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLI 304
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GL + R EA + P T++ ++ +C + +A ++ M + G+
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY +++ EA +F M K G +P V +Y I++ +C ++ A +
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVMITK-GCKPDVFSYNILINGYCKAKRIGEAKQ 423
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+++EM +G+ P + Y+TLI+ LC +L +A F+ ML G P +S L
Sbjct: 424 LFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFC 483
Query: 303 DEG 305
+G
Sbjct: 484 KQG 486
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 126/253 (49%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + ++ L++ V A+++FD M + PD+ SY IL+ G+ + K
Sbjct: 358 MTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 417
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G PD+VSY +I+ C R EA +LF+ M P +
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + L++A + F + +P YN ++ A C S + +A ++ E+ G
Sbjct: 478 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 537
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN + Y +++ L K G +EA F+ M + G P +Y +++R F + A
Sbjct: 538 LQPNVQIYTTIINGLCKEGLLDEALEAFRNM-EEDGCPPNEFSYNVIIRGFLQHKDESRA 596
Query: 241 MRIWDEMKARGVL 253
+++ EM+ +G +
Sbjct: 597 VQLIGEMREKGFV 609
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 2/229 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAV-ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
P ++ + +++A + Y +AV L ++ME P + LIN +R+
Sbjct: 119 PCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFS 178
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
+ K G + T+N ++ C + A + D+M G P+ TY +++ L
Sbjct: 179 VLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLC 238
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K G T A +F++M + G +P V TY ++ C + +V+ A+ I+ MKA+G+ P +
Sbjct: 239 KIGETVAAAGLFRKMG-EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNI 297
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y++LI LC+ + +A EM+ + I P FS L EG
Sbjct: 298 FTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEG 346
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 99/183 (54%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ +N LID LC+ + A ++F M PD+ +Y+ILL+G+ +Q L
Sbjct: 432 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 491
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++R M+ +P++V Y I+I+A C ++ EA +LF E+ +P+ I+ T+ING
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIING 551
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E L EAL+ F ++ G P +YN ++ + + A +++ EMR+ G +
Sbjct: 552 LCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611
Query: 185 TRT 187
T
Sbjct: 612 VAT 614
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 64/159 (40%)
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
I+DA + M P ++ +L ++K +A + G P T
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+++ F +VD+ + ++ G+ + ++TLIN LC K A + F +M+
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G +P ++ + L G A L +K+ + P
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQP 260
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 157/301 (52%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + +L N +D + K+ VE+ + +F+ +K F PD++SY+IL+ G +
Sbjct: 15 MNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 74
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ MK GF D +Y +++ C + + D+A E EM+ + P+ + +
Sbjct: 75 ARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGS 134
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL RL EA F ++K +G E Y++++ + RI++AY +++EM K G
Sbjct: 135 IIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 194
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T++ ++ L+KA EA F+ M ++ P TY I++ C + + A
Sbjct: 195 LAPNVYTWNSLMDALVKAEEINEALICFQSM-KEMKCSPNTYTYSILINGLCRVQKYNKA 253
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
W EM+ +G++P + Y+T+I+ L + DAC F+ G P F+ L +
Sbjct: 254 FVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEG 313
Query: 301 L 301
+
Sbjct: 314 M 314
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 131/275 (47%), Gaps = 1/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N ++D CKS V++A E ++MK + P + +Y +++G +
Sbjct: 85 MKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDR 144
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E K G E +V+ Y +I+ R DEA + EM P+ + + +
Sbjct: 145 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNS 204
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + ++EAL F K+ P TY+ ++ C + N A+ EM+K G
Sbjct: 205 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 264
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ L K G +A S+F+R G P +++ ++ + + A
Sbjct: 265 LVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGI-PDAASFNALIEGMSHANRAIEA 323
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+++E + RG + +L+++L + ++ A
Sbjct: 324 YHVFEETRLRGCRINVKACISLLDALNKAECIEQA 358
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 128/262 (48%), Gaps = 1/262 (0%)
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++++EM G +PD+ ++ A ++ +F +++ P + LI+G
Sbjct: 9 HKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHG 68
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + E F K+RGF +A YNAVV +C S +++ AY ++EM+ + P
Sbjct: 69 LTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPT 128
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L K R +EAY +F+ ++ G E V Y ++ F ++D A I
Sbjct: 129 VATYGSIIDGLAKIDRLDEAYMLFEE-AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLIL 187
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+EM +G+ P ++ +++L+++L +++++A FQ M ++ P +S L L
Sbjct: 188 EEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRV 247
Query: 305 GMEETAVVLAQKIDKLRKTPLV 326
A V Q++ K P V
Sbjct: 248 QKYNKAFVFWQEMQKQGLVPNV 269
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 1/279 (0%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
E ++F +M +R PD+ ++ + ++ ++ ++K GF PDV SY I+
Sbjct: 6 EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 65
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
I+ A + E +F M+ + +++G ++ +A + + K +
Sbjct: 66 IHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHV 125
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P TY +++ R+++AY + +E + GI N Y ++ K GR +EAY
Sbjct: 126 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 185
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ + M +K G P V T+ ++ +++ A+ + MK P + YS LIN L
Sbjct: 186 ILEEMMKK-GLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 244
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C K + A ++QEM G+ P ++ + L G
Sbjct: 245 CRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVG 283
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
GR E+ + +FK M+R+ G +P ++ + V+ I++++K G LP +
Sbjct: 3 GRKEDGHKIFKEMNRR-GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS 61
Query: 259 YSTLINSLCHEDKLDDACKYFQEM 282
YS LI+ L + + F M
Sbjct: 62 YSILIHGLTKAGQARETSSIFHAM 85
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 174/321 (54%), Gaps = 10/321 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+ K + N L+D+L +++ + A +F+K+ R F P++++YT+LL GW + +N
Sbjct: 269 MKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGR-FTPNLQTYTVLLNGWCRVRN 327
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ +++ +M D+ F+PD+V++ M+ K+ +A++LF M+A P +
Sbjct: 328 LMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTI 387
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ + ++ EA+Q+F + + G P+A Y ++ + R++ Y ++ EM+ G
Sbjct: 388 LVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANG 447
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +TY+ ++ + ++A ++K+M G +PT TY ++++ + +M
Sbjct: 448 CPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIEN-GIKPTTHTYSMMMKSYFQTRNYEMG 506
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP----GQLFSN 296
+ WDEMK +G P + Y+ I L + +A KY +EM++ G++ P + ++
Sbjct: 507 VAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAAD 566
Query: 297 LKQALRDEGMEETAVVLAQKI 317
+A R + +EE LAQK+
Sbjct: 567 FSRAGRPDILEE----LAQKM 583
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 87/211 (41%), Gaps = 35/211 (16%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL--- 61
G ++ + L+ CK ++ A + F++M+ PD YT L+ G+G QK +
Sbjct: 377 GPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTV 436
Query: 62 ------------------------LSMNE--------VYREMKDDGFEPDVVSYGIMINA 89
L N+ +Y++M ++G +P +Y +M+ +
Sbjct: 437 YGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKS 496
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+ + Y+ V + EM+ C P + + I GL S R +EA ++ + ++G +
Sbjct: 497 YFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAP 556
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
YN + + R + + +M+ G
Sbjct: 557 QLDYNKFAADFSRAGRPDILEELAQKMKFSG 587
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 163/314 (51%), Gaps = 4/314 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + +N LID LCK+ +RAQE+F+ MK P + +Y LL+G +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++EM D DV+S+ I++ C A + + A+E FR+M+ C P+ +
Sbjct: 61 LERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSV 118
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL R+S+A++ K RG P+ TY +V C ++ A+ ++ EM G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+ +LH L +A R +A ++ + M+ + G P V TY ++ C +V A
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR-GCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M +G P + +Y+ LIN LC D++D++ + + GI+P +S++
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297
Query: 301 L-RDEGMEETAVVL 313
L R ++E +L
Sbjct: 298 LCRSNRLDEACRLL 311
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 162/312 (51%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID LCK+ V +A E+ + MK R PD+ +YTIL++G ++ + + EV REM
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G P++V+Y +++ C A+R +A+ L R+M C P+ + TLI+GL R+
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A +G P+ YN ++ C + +++++ ++ GI P+ TY V+
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L ++ R +EA + + + G P V Y ++ C +VD A +++ M G
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSR-GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGC 354
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ YSTLI+ LC ++D+A M+ +G P +++L + L D + A+
Sbjct: 355 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 414
Query: 313 LAQKIDKLRKTP 324
L +++++ P
Sbjct: 415 LVEEMERSNCAP 426
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 155/298 (52%), Gaps = 3/298 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D L ++ +ERA +F +M RR D+ S+ IL+ G + + + E +R+M
Sbjct: 48 YNTLLDGLFRTGKLERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKM- 105
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DD P+V++Y ++I+ C A R +AVEL M+A C P + L++GL E +++
Sbjct: 106 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 165
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + G P TYN+++ C + R++DA +M +M G PN TY ++
Sbjct: 166 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 225
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR ++A ++ M K GT P + Y +++ C QVD ++ + + G+
Sbjct: 226 DGLCKVGRVKDACAMLADMIDKGGT-PDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 284
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P + YS++I LC ++LD+AC+ + G P L+S L L G + A
Sbjct: 285 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 342
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 151/299 (50%), Gaps = 2/299 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L +N L+ LC++R V A + M R P++ +Y L++G + +
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M D G PD++ Y ++IN C A + DE++ L R + KP + ++I G
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYG 297
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL EA + K RG P+ Y+ ++ C + ++++A+ + + M G +
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L KAGR +EA+ + RM R GT P+ TY +++ C +D A+ +
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLARMVRM-GTPPSTMTYNSLIKGLCDLNHLDEAIELV 416
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDAC-KYFQEMLDIGIRPPGQLFSNLKQALR 302
+EM+ P Y+ LI+ +C +++D A YFQEM+D G+ P +S L + L+
Sbjct: 417 EEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLK 475
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 125/253 (49%), Gaps = 10/253 (3%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M+D G EP+VV+Y +I+ C D A ELF M++ C PS + TL++GL +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA---YRMMDEMRKCGIGPNTRT 187
L A+ F + R + ++N +V C + +I A +R MD+ +C PN T
Sbjct: 61 LERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMDD--RC--SPNVIT 115
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y +++ L KA R +A + + M + G P V TY I+V C ++V A + EM
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKAR-GCSPDVITYTILVDGLCKESKVAAAWEVLREM 174
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-M 306
G +P + Y++L++ LC ++ DA ++M G P + L L G +
Sbjct: 175 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 234
Query: 307 EETAVVLAQKIDK 319
++ +LA IDK
Sbjct: 235 KDACAMLADMIDK 247
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G +N LI LC H++ A E+ ++M++ P +Y IL+ G + +
Sbjct: 384 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 443
Query: 61 LLSMN-EVYREMKDDGFEPDVVSYGIMI 87
+ S + ++EM D+G PD ++Y I++
Sbjct: 444 VDSAALDYFQEMIDNGVIPDHITYSILL 471
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 161/320 (50%), Gaps = 2/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG+K + D ++L+ +LC +HV AQE F K K P K+Y+IL+ GW + ++
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+V+ EM + D+++Y +++A C + D ++F+EM KP + F
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAI 283
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I+ + A + + K+ P T+N ++ C + +++DAY ++DEM + G
Sbjct: 284 FIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKG 343
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T TY+ ++ + A + RM R P TY +V+++ + D A
Sbjct: 344 ANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCL-PDRHTYNMVLKLLIRIGRFDRA 402
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
IW+ M R P + Y+ +I+ L + KL++AC+YF+ M+D GI P L+
Sbjct: 403 TEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRN 462
Query: 300 ALRDEGMEETAVVLAQKIDK 319
L G + VLA K+++
Sbjct: 463 RLVGWGQMDVVDVLAGKMER 482
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 2/285 (0%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD-DGFEPDVVSYGIMINAHCSAKRYDEA 99
F ++SY IL+E G K + + E ++ + FE + I+ A+ A EA
Sbjct: 98 FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 157
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
F M KP L++ L +K ++ A +FFG++K G P A TY+ +V
Sbjct: 158 CRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRG 217
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+ + A ++ DEM + + Y+ +L L K+G + Y +F+ M G +P
Sbjct: 218 WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMG-NLGLKP 276
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
++ I + +C V A ++ D MK ++P ++ ++ +I +LC +K+DDA
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM+ G P ++++ D A L ++D+ + P
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L+ LGS K+ + F ++++ FE + + V AY + ++A R + M +
Sbjct: 108 LVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEF 167
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GI P D +LH L A F + ++ G P+ TY I+VR +
Sbjct: 168 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGK-AKGFGIVPSAKTYSILVRGWARIRDASG 226
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A +++DEM R + + Y+ L+++LC +D K FQEM ++G++P F+
Sbjct: 227 ARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIH 286
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLV 326
A D G +A + +D++++ LV
Sbjct: 287 AYCDAGDVHSAY---KVLDRMKRYDLV 310
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 161/324 (49%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + +N L+ C++ V+ A+ + M++ P + ++ ++ G +
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGR 240
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM +G PD VSY +++ +C A EA+ +F EM P F +
Sbjct: 241 MEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTS 300
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ + L A+ GQ ++RG T+ A++ +C + ++DA M EMR+C
Sbjct: 301 LIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ Y+++++ K GR +EA + M K G +P V TY ++ +C D A
Sbjct: 361 IQPSVVCYNVLINGYCKLGRMDEARELIHEMEAK-GMKPDVVTYSTILSGYCKIGDTDSA 419
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M +GV+P YS+LI LC E +L DAC+ F++ML +G++P ++ L
Sbjct: 420 FELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDG 479
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
EG + A+ L ++ K P
Sbjct: 480 HCKEGNVQKALSLHDEMIKKGVLP 503
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L FN +++ LCK+ +E A+++FD+M + PD SY L+ G+ +
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC 275
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V+ EM G PDVV++ +I+A C A + AV L +M + + F
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G L +AL + ++ +P YN ++ YC R+++A ++ EM G
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +L K G T+ A+ + ++M +K G P TY ++R C ++ A
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK-GVVPDAITYSSLIRGLCEERRLGDA 454
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++M G+ P Y+TLI+ C E + A EM+ G+ P +S L
Sbjct: 455 CELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDG 514
Query: 301 L 301
L
Sbjct: 515 L 515
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 155/323 (47%), Gaps = 7/323 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G L +N ++ L + + A+ + M + P++ +Y IL+ GQ++
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L + V +M+ G P+VV+Y ++ A C A D A L M +PS F T+
Sbjct: 174 LGV--VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTV 231
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+NGL R+ +A + F + + G P+ +YN +V YC + +++A + EM + G+
Sbjct: 232 VNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGV 291
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ T+ ++H + +AG E A ++ +M R+ G T+ ++ FC N +D A+
Sbjct: 292 VPDVVTFTSLIHAMCRAGNLERAVALVGQM-RERGLRMNEFTFTALIDGFCRNGFLDDAL 350
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM+ + P + Y+ LIN C ++D+A + EM G++P +S +
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410
Query: 302 RDEGMEETAVVLAQKIDKLRKTP 324
G ++A L +K+ K P
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVP 433
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 154/333 (46%), Gaps = 18/333 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ F LID C++ ++ A +M++ R P + Y +L+ G+ +
Sbjct: 321 MRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGR 380
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ EM+ G +PDVV+Y +++ +C D A EL R+M P + +
Sbjct: 381 MDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSS 440
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL E+RL +A + F + + G +P+ TY ++ +C + A + DEM K G
Sbjct: 441 LIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKG 500
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYS-VFKRMSRKPGTEPTVSTYE-------------- 225
+ P+ TY +++ L K+ RT+EA +FK P P YE
Sbjct: 501 VLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP--VPDNIKYEALMHCCRTAEFKSV 558
Query: 226 -IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ F ++ A +++ M R +YS LI+ C + A + +++L
Sbjct: 559 VALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLR 618
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
G P +L + L +EGM A + Q++
Sbjct: 619 CGFSPNSTSTISLVRGLFEEGMTVEADNVIQEL 651
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 3/253 (1%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G+ P +++Y ++ A A A L M P+ + + L+ L + + EA
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 135 LQFFGQS-KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
L G + G P TYN +V A+C + ++ A R++ MR+ G+ P+ T++ V++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L KAGR E+A +F M+R+ G P +Y +V +C + A+ ++ EM +GV+
Sbjct: 234 GLCKAGRMEDARKMFDEMARE-GLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVV 292
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + +++LI+++C L+ A +M + G+R F+ L G + A++
Sbjct: 293 PDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLA 352
Query: 314 AQKIDKLRKTPLV 326
+++ + R P V
Sbjct: 353 MKEMRECRIQPSV 365
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 156/301 (51%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + +L N +D + K+ VE+ + +F+ +K F PD++SY+IL+ G +
Sbjct: 522 MNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 581
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ MK GF D +Y +++ C + + D+A E+ EM+ P+ + +
Sbjct: 582 ARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGS 641
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL RL EA F ++K +G E Y++++ + RI++AY +++EM K G
Sbjct: 642 IIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 701
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T++ ++ L+KA EA F+ M ++ P TY I++ C + + A
Sbjct: 702 LTPNVYTWNSLMDALVKAEEINEALICFQSM-KEMKCSPNTYTYSILINGLCRVQKYNKA 760
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
W EM+ +G++P + Y+T+I L + DAC F+ G P F+ L +
Sbjct: 761 FVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEG 820
Query: 301 L 301
+
Sbjct: 821 M 821
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 154/308 (50%), Gaps = 2/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +P F L+ L + VE A + D++K +PDI Y + ++ +G+ N
Sbjct: 208 MQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 267
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + E+K G +PD VSY MI C A R EA ELF +ME P + + T
Sbjct: 268 VDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNT 327
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G GS + A + Q K+RG P ++N+++ ++++A + + M+K
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-D 386
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ TY+I++ L AG+ EEAY + M G P + T I+V C + + A
Sbjct: 387 AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHA-GLFPNLLTVNIMVDRLCKAKKFEPA 445
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ RG P Y +LI+ L + +DDA + F+ MLD G ++++L +
Sbjct: 446 YEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRN 505
Query: 301 LRDEGMEE 308
G +E
Sbjct: 506 FFMHGRKE 513
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 151/305 (49%), Gaps = 2/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + + LI + ++R ERA E+ +M++ ++ + +T L+ ++
Sbjct: 173 MRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGR 232
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+K EPD+V Y + I+ A D A + F E+++ KP + +
Sbjct: 233 VEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTS 292
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L RLSEA + FGQ + P A YN ++ Y + + +AY+++D++++ G
Sbjct: 293 MIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERG 352
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +++ +L L K + +EA ++F+ M K EP STY I++ M C +V+ A
Sbjct: 353 CIPSVVSFNSILTCLGKKRKVDEALTLFEAM--KKDAEPNSSTYNIIIDMLCMAGKVEEA 410
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I DEM+ G+ P + + +++ LC K + A + F+ G P + +L
Sbjct: 411 YMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDG 470
Query: 301 LRDEG 305
L +G
Sbjct: 471 LGKKG 475
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 159/350 (45%), Gaps = 37/350 (10%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN ++ L K R V+ A +F+ MKK +P+ +Y I+++ + + EM
Sbjct: 359 SFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEM 417
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G P++++ IM++ C AK+++ A E+F C P+ +C+LI+GLG + +
Sbjct: 418 EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNV 477
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKC---------- 179
+A + F G Y +++ + R D +++ EM R C
Sbjct: 478 DDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTY 537
Query: 180 -----------------------GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
G P+ R+Y I++H L KAG+ E S+F M ++ G
Sbjct: 538 MDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM-KQQG 596
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
Y VV FC + ++D A + +EMK + V P + Y ++I+ L D+LD+A
Sbjct: 597 FALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAY 656
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+E GI ++S+L G + A ++ +++ K TP V
Sbjct: 657 MLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 706
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 164/361 (45%), Gaps = 36/361 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL L N ++D LCK++ E A E+F+ +R +P+ +Y L++G G++ N
Sbjct: 417 MEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGN 476
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M D G + V Y +I R ++ ++F+EM C+P + T
Sbjct: 477 VDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNT 536
Query: 121 -----------------------------------LINGLGSEKRLSEALQFFGQSKKRG 145
LI+GL + E F K++G
Sbjct: 537 YMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG 596
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F +A YNAVV +C S +++ AY +++EM+ + P TY ++ L K R +EAY
Sbjct: 597 FALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAY 656
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ K G E V Y ++ F ++D A I +EM +G+ P ++ +++L+++
Sbjct: 657 MLFEEAKSK-GIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDA 715
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 325
L +++++A FQ M ++ P +S L L A V Q++ K P
Sbjct: 716 LVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPN 775
Query: 326 V 326
V
Sbjct: 776 V 776
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 134/275 (48%), Gaps = 1/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N ++D CKS +++A EV ++MK +R P + +Y +++G +
Sbjct: 592 MKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDR 651
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E K G E +V+ Y +I+ R DEA + EM P+ + + +
Sbjct: 652 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 711
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + ++EAL F K+ P TY+ ++ C + N A+ EM+K G
Sbjct: 712 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 771
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ L K G +A S+F+R GT P +++ ++ + + A
Sbjct: 772 LVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGT-PDAASFNALIEGMSHANRAIEA 830
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+++E + +G + +L+++L + L+ A
Sbjct: 831 YHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 142/314 (45%), Gaps = 2/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I + E A ++ D++K+R P + S+ +L G+++ + ++ MK
Sbjct: 325 YNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK 384
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D EP+ +Y I+I+ C A + +EA + EME P+ +++ L K+
Sbjct: 385 KDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFE 443
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + +RG P + TY +++ ++DAYR+ + M G N Y ++
Sbjct: 444 PAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLI 503
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ GR E+ + +FK M+R+ G +P ++ + V+ I++++K G
Sbjct: 504 RNFFMHGRKEDGHKIFKEMNRR-GCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF 562
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
LP + YS LI+ L + + F M G + ++ + G + A
Sbjct: 563 LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYE 622
Query: 313 LAQKIDKLRKTPLV 326
+ +++ R P V
Sbjct: 623 VLEEMKVKRVPPTV 636
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V M+ F P +Y ++I A A++ + A+EL R+M+ + +F TL+ L
Sbjct: 169 VIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALA 228
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
E R+ AL + K EP+ YN + + + ++ A++ E++ G+ P+
Sbjct: 229 REGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDV 288
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y ++ L KAGR EA +F +M + P Y ++ + Q + A ++ D+
Sbjct: 289 SYTSMIWVLCKAGRLSEAEELFGQMETERAV-PCAYAYNTMIMGYGSAGQFENAYKLLDQ 347
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+K RG +P + +++++ L + K+D+A F+ M
Sbjct: 348 LKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM 383
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 115 PHIFCT-LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
P+ C L++ L +RL +A + ++ F P Y ++GA + + A ++
Sbjct: 146 PNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELL 205
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+M++ G + ++ L + GR E A ++ + + EP + Y + + F
Sbjct: 206 RQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV-KGSCLEPDIVLYNVCIDCFGK 264
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
VDMA + + E+K++G+ P Y+++I LC +L +A + F +M
Sbjct: 265 AGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQM 313
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 164/314 (52%), Gaps = 6/314 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + + +ID L KS HV++A +F++M Y L+ G G+
Sbjct: 185 MKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGR 244
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++REM G +PD V++ ++ A R EA +F+E C +++
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNV 304
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L KRL EA + FG+ ++ G P+ T+NA++ C S RI+DA+ ++ +M++ G
Sbjct: 305 LIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y+ ++ L K+GR EEA + M + G EP V TY ++ C +++ A
Sbjct: 365 CTPDVTVYNTLIDGLRKSGRVEEAGQLLLEM-QSLGYEPDVVTYNTLIDESCKGGRIEDA 423
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF----QEMLDIGIRPPGQLFSN 296
+R+++E+ A+G + Y+T++N LC ++D+A K F QE +D I P ++
Sbjct: 424 LRLFEEISAKGFANTV-TYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTT 482
Query: 297 LKQALRDEGMEETA 310
L R G+ E A
Sbjct: 483 LLNGARQAGLSELA 496
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 162/312 (51%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID K+ + ++A V+ M + PD ++ +L+ + + K + S+ +++ EM+
Sbjct: 92 YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQ 151
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ P+V++Y I+I+A C ++A+++F +M++ C+P+ + ++I+GLG +
Sbjct: 152 NQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVD 211
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F + G YN+++ S R + A ++ EM G+ P+ T+ ++
Sbjct: 212 KAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLV 271
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L AGR EA +F+ +R G V+ Y +++ C + ++D A I+ E++ G+
Sbjct: 272 YGLGVAGRASEARRIFQE-ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGL 330
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P ++ ++ L++ LC ++ DA +M G P +++ L LR G E A
Sbjct: 331 VPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQ 390
Query: 313 LAQKIDKLRKTP 324
L ++ L P
Sbjct: 391 LLLEMQSLGYEP 402
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 162/317 (51%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + FN L++ K++ V+ ++F++M+ + P++ +Y+IL++ +
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ +MK G P++ +Y MI+ + D+A LF EM + + ++ +
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GLG R A + F + +G +P+ T+ ++V + R ++A R+ E R G
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ Y++++ L K+ R +EA+ +F + + G P V T+ ++ C + ++ A
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGEL-EEDGLVPDVYTFNALMDGLCKSGRIHDA 353
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +MK G P + +Y+TLI+ L ++++A + EM +G P ++ L
Sbjct: 354 FILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDE 413
Query: 301 LRDEGMEETAVVLAQKI 317
G E A+ L ++I
Sbjct: 414 SCKGGRIEDALRLFEEI 430
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 1/299 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+E++ E +M+ R +Y L++ + + VYR M G PD ++ +
Sbjct: 70 LEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNV 129
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++NA AKR D +LF EM+ NC P+ + LI+ + + +AL+ F K RG
Sbjct: 130 LMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRG 189
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P TY +++ S ++ A+ + +EM G+ Y+ ++H L ++GR + A
Sbjct: 190 CRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAA 249
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ M K G +P T+ +V + A RI+ E + G +++Y+ LI++
Sbjct: 250 KLFREMLSK-GLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT 308
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
LC +LD+A + F E+ + G+ P F+ L L G A +L + + TP
Sbjct: 309 LCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTP 367
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G P V + ++ A+R++EA E+ E+E + P IF L G S L ++
Sbjct: 14 GGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKS 73
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
++ + + A YN+++ A+ + A + M + G+ P+T T++++++
Sbjct: 74 VEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNA 133
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
KA R + + +F+ M + P V TY I++ C V+ A++++ +MK+RG P
Sbjct: 134 FKKAKRVDSVWKLFEEMQNQ-NCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRP 192
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ Y+++I+ L +D A F+EM G+ ++++L L G + A L
Sbjct: 193 NIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKL 251
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 92/222 (41%), Gaps = 41/222 (18%)
Query: 134 ALQFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAY---------------RMMDEM- 176
A +FF + +RG P +V + R N+A R+ E+
Sbjct: 2 AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELA 61
Query: 177 ---------------------RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
+C + Y+ ++ +KAG T++A +V++ M +
Sbjct: 62 RGYASAGLLEKSVEALKRMEGHRCAL--TASAYNSLIDAFVKAGYTQKALAVYRVMG-QS 118
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P T+ +++ F +VD ++++EM+ + P + YS LI+++C ++ A
Sbjct: 119 GLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKA 178
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
K F +M G RP ++++ L G + A L +++
Sbjct: 179 LKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEM 220
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 171/320 (53%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK L F+ L+ K R+++ + ++M+ P+I +YTI + G+ +
Sbjct: 224 GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEA 283
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M DDG PDVV+Y ++I+A C+A++ D+A+ LF +M++++ KP + TL++
Sbjct: 284 YRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDK 343
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + + + + G+ P+ T+ +V A C + RIN+A+ ++D MRK G+ PN
Sbjct: 344 FSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPN 403
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L++A R ++A +F M G EPT TY +++ + A+ +
Sbjct: 404 LHTYNTLISGLLRANRLDDALDLFSNM-ESLGVEPTAYTYILLIDYHGKSGHPGKALETF 462
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++MKARG+ P + + + SL +L +A F E+ G+ P ++ + +
Sbjct: 463 EKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKV 522
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G + A+ L ++ K++ P
Sbjct: 523 GQVDEAIKLLSEMSKVQCEP 542
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 178/392 (45%), Gaps = 71/392 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G ++ + LID LC +R ++ A +F KMK PD +Y LL+ + +
Sbjct: 290 MDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGH 349
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +++ EM+ DG+ PDVV++ I++NA C A R +EA +L M P+ H + T
Sbjct: 350 LDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNT 409
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV----------------------- 157
LI+GL RL +AL F + G EP A TY ++
Sbjct: 410 LISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARG 469
Query: 158 --------GAYCWSM----RINDAYRMMDEMRKCGIGPNTRTYD---------------- 189
A +S+ R+ +A M +E++ G+ P++ TY+
Sbjct: 470 IAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAI 529
Query: 190 ---------------IVLHHLI----KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
IV++ LI KAGR EEA+ +F RM + PTV TY I++
Sbjct: 530 KLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRM-EEMNLAPTVVTYNILLAG 588
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
Q+ A+++++ M G P ++TL++ LC D++D A K F +M + RP
Sbjct: 589 LGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPD 648
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
F+ + + + A+ L ++ KL +
Sbjct: 649 VLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLR 680
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 149/296 (50%), Gaps = 2/296 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+I LCK + A+ VF K K P +K Y +L++G+ + N+ ++ EMK
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G PD +Y +I+AH + + +E +L+ EM CKP+ + +I+ L RL +A
Sbjct: 820 GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKA 879
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ + F P T+ ++ S R++DA+ M D M G PN+ Y+I+++
Sbjct: 880 MDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNG 939
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K G + A FKRM K G P + +Y I+V + C +VD A+ ++++K G+ P
Sbjct: 940 YGKLGHVDTACEFFKRMV-KEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDP 998
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ Y+ +IN L + ++A F EM + GI P +++L L GM E A
Sbjct: 999 DLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 168/315 (53%), Gaps = 1/315 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+ G+K L +N LID + +VE A +F++MK PD +Y L++ G+ +
Sbjct: 783 ELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKIN 842
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ ++Y EM G +P+ ++Y ++I+ + R D+A++L+ + + + P+P F LI
Sbjct: 843 ELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLI 902
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL RL +A + F G P + YN +V Y ++ A M K GI
Sbjct: 903 DGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIR 962
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ ++Y I++ L AGR ++A F+++ ++ G +P + Y +++ + + + A+
Sbjct: 963 PDLKSYTILVDILCIAGRVDDALHYFEKL-KQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ EM+ RG++P ++ Y++LI +L +++A K ++E+ IG++P ++ L +
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYT 1081
Query: 303 DEGMEETAVVLAQKI 317
G E A + +K+
Sbjct: 1082 LSGNSELAYGIYKKM 1096
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 34/310 (10%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +++ L R VE VFD M+++ ++ +Y I+ + + L +M++
Sbjct: 128 NHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMRE 187
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GF + SY +I+ + EA+E++R M + KPS F L+ G + +
Sbjct: 188 AGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKT 247
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ + + G P TY + +I++AYR+M M G GP+ TY +++
Sbjct: 248 VMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLID 307
Query: 194 HLIKAGRTEEAYSVFKRM---SRKP-------------------------------GTEP 219
L A + ++A +F +M S KP G P
Sbjct: 308 ALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAP 367
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V T+ I+V C +++ A + D M+ +GVLP +H Y+TLI+ L ++LDDA F
Sbjct: 368 DVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLF 427
Query: 280 QEMLDIGIRP 289
M +G+ P
Sbjct: 428 SNMESLGVEP 437
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 136/277 (49%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI L +S + A EV+ +M P +K+++ L+ G+++N+ ++ + EM+
Sbjct: 197 YNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEME 256
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P++ +Y I I + DEA + + M+ C P + LI+ L + ++L
Sbjct: 257 SMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLD 316
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ F + K +P+ TY ++ + ++ ++ EM G P+ T+ I++
Sbjct: 317 DAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILV 376
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L KAGR EA+ + M RK G P + TY ++ ++D A+ ++ M++ GV
Sbjct: 377 NALCKAGRINEAFDLLDTM-RKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGV 435
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + Y LI+ A + F++M GI P
Sbjct: 436 EPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAP 472
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 166/349 (47%), Gaps = 44/349 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K + ++ N LIDTL K+ VE A ++F +M++ P + +Y ILL G G++
Sbjct: 535 MSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQ 594
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ M G P+ +++ +++ C D A+++F +M NC+P F T
Sbjct: 595 IQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNT 654
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + ++ A+ F Q KK P+ T ++ S +I DA+R+ ++
Sbjct: 655 IIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFY-Q 712
Query: 181 IGPNT-RTY--DIVLHHLIKAG----------------------------------RTEE 203
+G N R++ D++ L +AG +T
Sbjct: 713 VGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSV 772
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A +VF + +++ G +PT+ Y +++ F V++A +++EMK+ G P Y++LI
Sbjct: 773 ARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLI 832
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPP----GQLFSNLKQALR-DEGME 307
++ K+++ + EML G +P + SNL ++ R D+ M+
Sbjct: 833 DAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMD 881
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 146/318 (45%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + LID KS H +A E F+KMK R P+I + L +
Sbjct: 430 MESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGR 489
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E+K G PD V+Y +M+ + + DEA++L EM C+P + +
Sbjct: 490 LGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINS 549
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ EA Q F + ++ P TYN ++ +I A ++ + M G
Sbjct: 550 LIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHG 609
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT T++ +L L K + A +F +M+ P V T+ ++ F Q+ A
Sbjct: 610 CSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTM-NCRPDVLTFNTIIHGFIKQNQIKNA 668
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML-DIGIRPPGQLFSNLKQ 299
+ ++ +MK + + P TL+ + +++DA + ++ +G + ++
Sbjct: 669 IWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMG 727
Query: 300 ALRDEGMEETAVVLAQKI 317
+ E E A++ +++
Sbjct: 728 GILTEAGTEKAILFGERL 745
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +L +N +I+ L +S+ E A +F +M+ R PD+ +Y L+ G +
Sbjct: 995 GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y E++ G +P+V +Y +I + + + A ++++M C P+ F L N
Sbjct: 1055 GKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + N LI++ C V A V K+ K PD S+T L++G +
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +GF+PDVV Y +IN C A+ L R ME NC+P ++ T
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L +++ ++A F + +G P T N++V A C +++EM
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + V+ L K G +A+ V M + G EP V TY ++ C +++D A
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQS-GVEPDVVTYTALIDGHCLRSEMDEA 338
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M +G P + Y+TLIN C +++D A F+EM + P ++ L
Sbjct: 339 VKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHG 398
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A+ L +++ + P
Sbjct: 399 LCHVGRLQDAIALFREMVACGQIP 422
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + N L+ LC + + ++M + P+ S T +++ ++ +
Sbjct: 244 GISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQA 303
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V M G EPDVV+Y +I+ HC DEAV++F M C P+ + TLING
Sbjct: 304 HDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLING 363
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+R+ +A+ F + ++ P TYN ++ C R+ DA + EM CG P+
Sbjct: 364 YCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPD 423
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+L +L K ++A ++ K + +P + Y IV+ C +++ A ++
Sbjct: 424 LVTYRILLDYLCKNCHLDKAMALLKAI-EGSNLDPDIQIYTIVIDGMCRAGELEDARDLF 482
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ ++G+ P + Y+ + + LC LD+A K F EM + G ++ + Q
Sbjct: 483 SNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRN 542
Query: 305 GMEETAVVLAQKI 317
A+ L +++
Sbjct: 543 NETSRAIQLLEEM 555
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 153/319 (47%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + ++ + LI +LCK R +A +F +M + P+I + L+
Sbjct: 205 MEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGE 264
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+N + EM D P+ +S +++A C +A ++ M + +P +
Sbjct: 265 WKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTA 324
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + EA++ F +G P +YN ++ YC R++ A + +EM +
Sbjct: 325 LIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQK 384
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT TY+ ++H L GR ++A ++F+ M G P + TY I++ C N +D A
Sbjct: 385 LIPNTVTYNTLIHGLCHVGRLQDAIALFREMV-ACGQIPDLVTYRILLDYLCKNCHLDKA 443
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + ++ + P + +Y+ +I+ +C +L+DA F + G++P ++ +
Sbjct: 444 MALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHG 503
Query: 301 LRDEGMEETAVVLAQKIDK 319
L G+ + A L ++D+
Sbjct: 504 LCKRGLLDEATKLFMEMDE 522
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++D LCK V +A +V D M + +PD+ +YT L++G + + +V+ M
Sbjct: 287 LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV 346
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V SY +IN +C +R D+A+ LF EM P+ + TLI+GL RL
Sbjct: 347 HKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQ 406
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ F + G P+ TY ++ C + ++ A ++ + + P+ + Y IV+
Sbjct: 407 DAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVI 466
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ +AG E+A +F +S K G +P V TY I+ C +D A +++ EM
Sbjct: 467 DGMCRAGELEDARDLFSNLSSK-GLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENAC 525
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
Y+T+ ++ A + +EML G + L L D+G++++
Sbjct: 526 SADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQS 582
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 2/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ ++ + LID C ++ A +VFD M + P++ SY L+ G+ + +
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIER 369
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM P+ V+Y +I+ C R +A+ LFREM A P +
Sbjct: 370 MDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRI 429
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L L +A+ + +P+ Y V+ C + + DA + + G
Sbjct: 430 LLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG 489
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+I+ H L K G +EA +F M + TY + + F N + A
Sbjct: 490 LKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADG-CTYNTITQGFLRNNETSRA 548
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+++ +EM ARG +TL+ + +D LD +
Sbjct: 549 IQLLEEMLARG-FSCDVSTTTLLVGMLSDDGLDQS 582
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 129/296 (43%), Gaps = 4/296 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F++M P I + +L + K ++ + R+M G +V + +
Sbjct: 55 LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN+ C R + A + ++ C+P F TLI GL E ++ EAL F + G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+P+ Y ++ C + + A R++ M K P+ Y ++H L K + +A+
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++F M K G P + T +V C + + +EM ++P +T++++
Sbjct: 235 NLFSEMITK-GISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDA 293
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDEGMEETAVVLAQKIDK 319
LC E + A M G+ P ++ L LR E M+E V + K
Sbjct: 294 LCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSE-MDEAVKVFDMMVHK 348
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 162/313 (51%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G ++ + LID LC +R ++ A+EVF KMK R PD +Y LL+ + ++
Sbjct: 286 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRD 345
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L S+N+ + EM+ DG PDVV++ I+++A C A + EA M P+ H + T
Sbjct: 346 LDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNT 405
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL RL +AL+ F + G +P A TY + Y S A ++M+ G
Sbjct: 406 LICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKG 465
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + L+ L KAGR EA +F + + G P TY ++++ + ++D A
Sbjct: 466 IAPNIVACNASLYSLAKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEA 524
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ EM P + + ++LIN+L D++D+A K F M ++ ++P ++ L
Sbjct: 525 IKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 584
Query: 301 LRDEGMEETAVVL 313
L G + A+ L
Sbjct: 585 LGKNGKIQEAIEL 597
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 163/316 (51%), Gaps = 3/316 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G++ +LP +N LI L ++ +E AQ+VF ++K PD+ +Y LL+ +G+ +
Sbjct: 781 LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDE 840
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE-MEATNCKPSPHIFCTLI 122
+ E+Y+EM EP+ +++ I+I+ A D+A++L+ + M + P+ + LI
Sbjct: 841 LFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 900
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL RL EA Q F G P YN ++ + + + A + M K G+
Sbjct: 901 DGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 960
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ +TY +++ L GR +E F+ + ++ G P V Y +++ +++ A+
Sbjct: 961 PDLKTYSVLVDCLCMVGRVDEGLHYFREL-KESGLNPDVVCYNLIINGLGKFHRLEEALV 1019
Query: 243 IWDEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+++EM K+RG+ P ++ Y++LI +L +++A K + E+ G+ P F+ L +
Sbjct: 1020 LFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1079
Query: 302 RDEGMEETAVVLAQKI 317
G E A + Q +
Sbjct: 1080 SLSGKPEHAYAVYQTM 1095
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 157/313 (50%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L ++ L+ L K R +E + +M+ P++ ++TI + G+ +
Sbjct: 220 GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 279
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ + M D+G PDVV+Y ++I+A C+A++ D A E+F +M+ KP + TL++
Sbjct: 280 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDR 339
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L QF+ + +K G P+ T+ +V A C + +A+ +D MR GI PN
Sbjct: 340 FSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPN 399
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L++ R ++A +F M G +PT TY + + + + A+ +
Sbjct: 400 LHTYNTLICGLLRVHRLDDALEIFDNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 458
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++MK +G+ P + + + SL + +A + F + DIG+ P ++ + +
Sbjct: 459 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 518
Query: 305 GMEETAVVLAQKI 317
G + A+ L ++
Sbjct: 519 GEIDEAIKLLSEM 531
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 134/315 (42%), Gaps = 34/315 (10%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +++ L +E VFD M+KR D +Y + + + L R+M++
Sbjct: 124 NYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMRE 183
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GF + SY +I+ ++ EA+E++R M +PS + +L+ GLG + +
Sbjct: 184 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIES 243
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ + + G +P T+ + + +IN+AY ++ M G GP+ TY +++
Sbjct: 244 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 303
Query: 194 HLIKAGRTEEAYSVFKRMS----------------------------------RKPGTEP 219
L A + + A VF +M K G P
Sbjct: 304 ALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVP 363
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V T+ I+V C A D M+ +G+LP +H Y+TLI L +LDDA + F
Sbjct: 364 DVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIF 423
Query: 280 QEMLDIGIRPPGQLF 294
M +G++P +
Sbjct: 424 DNMESLGVKPTAYTY 438
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 136/278 (48%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ L +N LI L + ++ A E+FD M+ P +Y + ++ +G+ + +S
Sbjct: 395 GILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 454
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + +MK G P++V+ + + A R EA ++F ++ P + ++
Sbjct: 455 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKC 514
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EA++ + + EP+ N+++ + R+++A++M M++ + P
Sbjct: 515 YSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 574
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +L L K G+ +EA +F+ M +K G P T+ + C N +V +A+++
Sbjct: 575 VVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLCKNDEVTLALKML 633
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+M G +P + Y+T+I L ++ +A +F +M
Sbjct: 634 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 671
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 141/319 (44%), Gaps = 5/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + ID KS A E F+KMK + P+I + L +
Sbjct: 426 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 485
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ +KD G PD V+Y +M+ + DEA++L EM C+P + +
Sbjct: 486 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNS 545
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN L R+ EA + F + K+ +P TYN ++ + +I +A + + M + G
Sbjct: 546 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 605
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYS-VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
PNT T++ + L K A +FK M G P V TY ++ N QV
Sbjct: 606 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM--GCVPDVFTYNTIIFGLVKNGQVKE 663
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF-SNLK 298
AM + +MK + V P TL+ + ++DA K L P LF +L
Sbjct: 664 AMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLM 722
Query: 299 QALRDEGMEETAVVLAQKI 317
++ E + AV ++++
Sbjct: 723 GSILAEAGIDNAVSFSERL 741
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 2/251 (0%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
KD G +P + +Y ++I A + A ++F +++ T C P + L++ G ++
Sbjct: 779 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKI 838
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM-DEMRKCGIGPNTRTYDI 190
E + + + EP T+N V+ + ++DA + D M P TY
Sbjct: 839 DELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 898
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L K+GR EA +F+ MS G P + Y I++ F + D A ++ M
Sbjct: 899 LIDGLSKSGRLYEAKQLFEGMSDY-GCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 957
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
GV P + YS L++ LC ++D+ YF+E+ + G+ P ++ + L E A
Sbjct: 958 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEA 1017
Query: 311 VVLAQKIDKLR 321
+VL ++ K R
Sbjct: 1018 LVLFNEMKKSR 1028
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 1/190 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + +N LI+ K+ + A +F +M K PD+K+Y++L++
Sbjct: 919 MSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 978
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCKPSPHIFC 119
+ +RE+K+ G PDVV Y ++IN R +EA+ LF EM+ + P + +
Sbjct: 979 VDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYN 1038
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI LG + EA + + + ++ G EP T+NA++ Y S + AY + M
Sbjct: 1039 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1098
Query: 180 GIGPNTRTYD 189
G PNT TY+
Sbjct: 1099 GFSPNTGTYE 1108
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 39/345 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
FN L D LCK+ V A ++ KM PD+ +Y ++ G GQ K + +
Sbjct: 613 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 672
Query: 70 EMKDDGFE------PDVVSYGIMINAHCSAKRY--------------------------D 97
++ F P VV G++ +A+ + D
Sbjct: 673 KLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGID 732
Query: 98 EAVELFREMEATN-CKPSPHIFCTLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNA 155
AV + A C+ I +I S A F + +K G +P+ PTYN
Sbjct: 733 NAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNL 792
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++G + I A + +++ G P+ TY+ +L K+G+ +E + ++K MS
Sbjct: 793 LIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHE 852
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRI-WDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
EP T+ IV+ VD A+ + +D M R P Y LI+ L +L +
Sbjct: 853 -CEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 911
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
A + F+ M D G RP +++ L G + A L +++ K
Sbjct: 912 AKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVK 956
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLS 63
GL ++ +N +I+ L K +E A +F++MKK R PD+ +Y L+ G +
Sbjct: 993 GLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEE 1052
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y E++ G EP+V ++ +I + + + + A +++ M P+ + L N
Sbjct: 1053 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+I + + D M+K I +T TY + L G +A ++M R+ G +Y
Sbjct: 135 KIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM-REFGFVLNAYSY 193
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ + + AM ++ M G P + YS+L+ L ++ +EM
Sbjct: 194 NGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMET 253
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+G++P F+ + L G A + +++D
Sbjct: 254 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMD 287
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 150/277 (54%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI TLCK HVE A E+ + + PD+ ++ L++G N E++ EMK
Sbjct: 375 YNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMK 434
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G +PD +Y I+I + CS +R EA+ L +EME + C + ++ TLI+GL R+
Sbjct: 435 EKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVG 494
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F Q + G + TYN ++ C S R+ +A ++MD+M G+ P+ TY +L
Sbjct: 495 DAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTML 554
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + G + A + + M+ G EP + TY ++ C +VD+A ++ ++ +G+
Sbjct: 555 KYFCQQGDIKRAADIVQNMTLN-GCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM 613
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+ +I +LC + +A + F+EM++ G P
Sbjct: 614 VLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPP 650
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ +N LI LCK ++ A E+ M R +P+ +Y L+ ++ ++ +
Sbjct: 332 GFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAA 391
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ R + G PDV ++ +I C + A+ELF EM+ C P + LI
Sbjct: 392 TELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIES 451
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L SE+RL EAL + + G YN ++ C + R+ DA + D+M G+ +
Sbjct: 452 LCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRS 511
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY+ +++ L K+ R EEA + +M + G +P TY +++ FC + A I
Sbjct: 512 SVTYNTLINGLCKSKRVEEAAQLMDQMIME-GLKPDKFTYTTMLKYFCQQGDIKRAADIV 570
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M G P + Y TLI LC ++D A K + + G+ Q ++ + QAL
Sbjct: 571 QNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQAL 627
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 136/274 (49%), Gaps = 3/274 (1%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ FN LI LCK+ + A + + M PD K++T L++G+ ++ ++ +
Sbjct: 198 DVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIK 257
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
M + G E VS +++N C R +EA+ E E C P F L+NGL
Sbjct: 258 ELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGF-C-PDQVTFNALVNGLCRT 315
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ + L+ ++GFE + TYN+++ C I++A ++ M PNT TY
Sbjct: 316 GHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY 375
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ L K E A + + ++ K G P V T+ +++ C + ++AM +++EMK
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSK-GVLPDVCTFNSLIQGLCLTSNREIAMELFEEMK 434
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+G P YS LI SLC E +L +A +EM
Sbjct: 435 EKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 3/276 (1%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L++ LCK +E A ++ F PD ++ L+ G + ++ E+ M +
Sbjct: 273 NVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLE 330
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GFE DV +Y +I+ C DEAVE+ M + +C+P+ + TLI L E +
Sbjct: 331 KGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEA 390
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + +G P+ T+N+++ C + A + +EM++ G P+ TY I++
Sbjct: 391 ATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIE 450
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L R +EA + K M G V Y ++ C N +V A I+D+M+ GV
Sbjct: 451 SLCSERRLKEALMLLKEMELS-GCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVS 509
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
Y+TLIN LC ++++A + +M+ G++P
Sbjct: 510 RSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKP 545
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 137/300 (45%), Gaps = 40/300 (13%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K LPD FN LI LC + + E A E+F++MK++ DPD +Y+IL+E ++ L
Sbjct: 401 KGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKE 460
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ +EM+ G +VV Y +I+ C R +A ++F +ME S + TLIN
Sbjct: 461 ALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLIN 520
Query: 124 GLGSEKRLSEALQFFGQSKKRGF-----------------------------------EP 148
GL KR+ EA Q Q G EP
Sbjct: 521 GLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEP 580
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ TY ++G C + R++ A +++ ++ G+ + Y+ V+ L K RT+EA +F
Sbjct: 581 DIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLF 640
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNA-QVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+ M K G P V TY+IV R C + A+ EM +G+LP + L LC
Sbjct: 641 REMMEK-GDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC 699
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 147/315 (46%), Gaps = 3/315 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
F +K + +N + L K+ ++ + + KM PD+ ++ IL+ + L
Sbjct: 158 FAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRP 217
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ +M + G PD ++ ++ + A+ + M + C+ + L+N
Sbjct: 218 AILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVN 277
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL E R+ EAL+F ++ GF P+ T+NA+V C + I MMD M + G
Sbjct: 278 GLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFEL 335
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY+ ++ L K G +EA + M + EP TY ++ C V+ A +
Sbjct: 336 DVYTYNSLISGLCKLGEIDEAVEILHHMVSR-DCEPNTVTYNTLIGTLCKENHVEAATEL 394
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ ++GVLP + +++LI LC + A + F+EM + G P +S L ++L
Sbjct: 395 ARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCS 454
Query: 304 EGMEETAVVLAQKID 318
E + A++L ++++
Sbjct: 455 ERRLKEALMLLKEME 469
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 1/196 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + +N LI+ LCKS+ VE A ++ D+M PD +YT +L+ + QQ +
Sbjct: 503 MEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGD 562
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + M +G EPD+V+YG +I C A R D A +L R ++ +P +
Sbjct: 563 IKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNP 622
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC-WSMRINDAYRMMDEMRKC 179
+I L KR EA++ F + ++G P+ TY V C I +A EM +
Sbjct: 623 VIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEK 682
Query: 180 GIGPNTRTYDIVLHHL 195
GI P ++ + L
Sbjct: 683 GILPEFPSFGFLAEGL 698
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 4/285 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + + +N LID LCK+ V A+++FD+M+ +Y L+ G + K
Sbjct: 468 MELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKR 527
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +G +PD +Y M+ C A ++ + M C+P + T
Sbjct: 528 VEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGT 587
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL R+ A + + +G YN V+ A C R +A R+ EM + G
Sbjct: 588 LIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKG 647
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P+ TY IV L G +EA M K G P ++ + C + D
Sbjct: 648 DPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEK-GILPEFPSFGFLAEGLCSLSMEDT 706
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ + + +G +++I K +DA +LD
Sbjct: 707 LIQLINMVMEKGRFS--QSETSIIRGFLKIQKFNDALANLGAILD 749
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 165/317 (52%), Gaps = 10/317 (3%)
Query: 6 LKQELPD-----FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
K+ +PD FN L+ TLC+ + + A+ V+ +K F P+++++ ILL GW KN
Sbjct: 156 FKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSLK-HNFRPNLQTFNILLSGW---KN 211
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EMK+ G EPDVV+Y +++ +C + ++A ++F EM + P + +
Sbjct: 212 VEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTS 271
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GLG + +A + K+ G P+ P YNA + YC + R+ A+ ++DEM G
Sbjct: 272 VIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKG 331
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY++ + + +++++KRM + G P + ++R+F + +++MA
Sbjct: 332 LSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGE-GCLPYTQSCMFLIRLFKRHEKMEMA 390
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++W EM +G + L + LC KL +A K F EM++ G RP F +K
Sbjct: 391 LQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSFKRIKVL 450
Query: 301 LRDEGMEETAVVLAQKI 317
+ E L QK+
Sbjct: 451 MELANKHEAIQNLTQKM 467
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ ++ +N L+D CK R +E+A +VFD+M+++ PD+ +YT ++ G G
Sbjct: 222 MKEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQ 281
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+V +EMK+ G PDV +Y I +C AKR A EL EM P+ +
Sbjct: 282 PDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYNL 341
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L + + + G P + ++ + ++ A ++ EM + G
Sbjct: 342 FFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVEKG 401
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
G T D++ L G+ EA F M K VS I V M
Sbjct: 402 FGSYTLVSDVLFDMLCDMGKLMEAEKCFLEMIEKGQRPSNVSFKRIKVLM 451
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 162/318 (50%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+FG+K + DF++L+ LCK++HV++AQ+ FD+ K RF K+Y+IL+ GWG +
Sbjct: 173 MDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQ-AKNRFLLTAKTYSILISGWGDIGD 231
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+E+++ M + G D+++Y ++ A C DEA +F +M + +P +
Sbjct: 232 SEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSI 291
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I+ + AL+ + ++ P TYN ++ C + + +AY ++DEM G
Sbjct: 292 FIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRG 351
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T +Y+ + + A + RM K P TY +V+++ + D
Sbjct: 352 VRPDTWSYNAIQAYHCDHCEVNRAIRLMFRM-EKDNCLPDRHTYNMVLKLLIRIGRFDKV 410
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
++W M + P + YS +I+ C + KL++ACKYF+ M+D GI P L+
Sbjct: 411 TKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRN 470
Query: 300 ALRDEGMEETAVVLAQKI 317
L G + +LA K+
Sbjct: 471 QLLGLGFLDHIEILAAKM 488
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 3/280 (1%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEA 99
F + S+ IL+E G K + + EM+ +E + + ++ A+ A D A
Sbjct: 107 FQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRAYSQANLPDGA 166
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ F M+ KP+ + F L+ L K + +A QFF Q+K R F A TY+ ++
Sbjct: 167 IRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNR-FLLTAKTYSILISG 225
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+ A+ + M + G + Y+ +L L K G +EA ++F M K EP
Sbjct: 226 WGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSK-RVEP 284
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
TY I + +C V A+R+ D+M+ +LP + Y+ +I LC + +++A
Sbjct: 285 DAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLL 344
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
EM+ G+RP ++ ++ D A+ L +++K
Sbjct: 345 DEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEK 384
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 6/206 (2%)
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKR-GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
F L+ LGS K+ + F + + +E + + + AY + + A R + M
Sbjct: 114 FHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRAYSQANLPDGAIRSFNRM 173
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ GI P +D +L L K ++A F + + T TY I++ +
Sbjct: 174 DEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNR--FLLTAKTYSILISGWGDIGD 231
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+ A ++ M +G + Y+ L+ +LC +D+A F +ML + P +S
Sbjct: 232 SEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSI 291
Query: 297 LKQALRDEGMEETAVVLAQKIDKLRK 322
+ D ++A+ + +DK+R+
Sbjct: 292 FIHSYCDADDVQSAL---RVLDKMRR 314
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
Query: 133 EALQFFGQSKK-RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGIGPNTRTYDI 190
A +FF +K GF+ +++ +V + + + EMR C N+ + +
Sbjct: 93 SAHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWL 152
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+ +A + A F RM + G +PT++ ++ ++ + C V A + +D+ K R
Sbjct: 153 IFRAYSQANLPDGAIRSFNRMD-EFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNR 211
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+L YS LI+ + A + FQ ML+ G ++NL QAL G + A
Sbjct: 212 FLLTA-KTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEA 270
Query: 311 VVLAQKIDKLRKTP 324
+ + R P
Sbjct: 271 KTIFHDMLSKRVEP 284
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 159/297 (53%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + ++ L+ LCK+ ++ A +VF+ PD+ +Y+ L+ G +
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGR 197
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ +M+++ EPDVV++ +++ C R EA ++ ME NC P+ + +
Sbjct: 198 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL ++ +A + F + RG EP TYN+++ +C + ++ A +M+EM G
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ L K GR EA +F M K P V TY ++ FC ++DMA
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF-CNPDVITYSCLIGGFCKLERIDMA 376
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++D+M + VLP + +STL+ C+ +DDA + +EM+ P +++L
Sbjct: 377 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 433
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 158/312 (50%), Gaps = 4/312 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N LID LCK+ A +F MK + +PD+ +Y+ L+ G+ + + +
Sbjct: 319 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 378
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ +M PDVV++ ++ +C+A D+A L EM A++C P + + +L++G
Sbjct: 379 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 438
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA + + KRG +P TY A++ A+C + + AY++++EM G+ PN
Sbjct: 439 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVI 498
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ G EEA + +R+ R + + Y +++ C ++ A+ + +
Sbjct: 499 TYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEA 558
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM-LDIGIRPPGQLFSNLKQALRDEG 305
+K G P +Y LI LC +L A + +EM L RP + + + Q L EG
Sbjct: 559 IKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREG 618
Query: 306 MEETAVVLAQKI 317
E A LA ++
Sbjct: 619 RHEEANALADEL 630
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 153/307 (49%), Gaps = 1/307 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+D LCK ++ AQ+V + M+ R P++ +Y+ L++G + + EV++ M
Sbjct: 220 FTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 279
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP+VV+Y +I+ C D A+ L EM AT C P + TLI+GL R
Sbjct: 280 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 339
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + FG K + P+ TY+ ++G +C RI+ A + D+M K + P+ T+ ++
Sbjct: 340 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
AG ++A + + M P V TY +V FC ++ A R+ M RG
Sbjct: 400 EGYCNAGLVDDAERLLEEMV-ASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGC 458
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ LI++ C K A K +EM+ G++P + +L G E A
Sbjct: 459 QPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARK 518
Query: 313 LAQKIDK 319
+ +++++
Sbjct: 519 MLERLER 525
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 145/282 (51%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + ++ +I C+ V+ A ++F +M + P++ +Y LL G +
Sbjct: 68 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 127
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ EM++ G +PD SY ++ C + D A+++F + +C P + T
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL RL EA + F + ++ EP+ T+ A++ C R+ +A ++++ M
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ L K G+ +A VFKRM + G EP V TY ++ FC VD A
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVR-GIEPNVVTYNSLIHGFCMTNGVDSA 306
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ + +EM A G LP + Y+TLI+ LC + +A + F +M
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 348
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 160/302 (52%), Gaps = 1/302 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+ID LCK+ + A F KMKK+ P+ +Y +L+ G+ + + + +EMK+ G
Sbjct: 13 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P+VV+Y +I+ C + D A +LFR+M C P+ + TL++GL + EA
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + ++RG +P+ +Y+ ++ C + +I+ A ++ ++ P+ Y ++ L
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K GR +EA +F++M R+ EP V T+ ++ C ++ A ++ + M+ R P
Sbjct: 193 CKTGRLDEACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 251
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ YS+LI+ LC ++ DA + F+ M+ GI P +++L ++A++L +
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311
Query: 316 KI 317
++
Sbjct: 312 EM 313
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
E +V+++ IMI+ C A R EA F +M+ P+ + LING ++ A
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
+ K+ G P TY+ V+ +C +++ AY++ +M + G PN TY+ +L L
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
+ G +EAY + M R+ G +P +Y+ ++ C ++DMA++++++ P +
Sbjct: 124 RNGLMDEAYELLDEM-RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQ 315
YSTLI LC +LD+ACK F++M + P F+ L L + + ++E VL
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242
Query: 316 KIDK 319
D+
Sbjct: 243 MEDR 246
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 133/264 (50%), Gaps = 1/264 (0%)
Query: 42 DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
+ ++ ++TI+++G + L + +MK G P+ +Y ++IN C + A
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L +EM+ + P+ + T+I+G + ++ A + F Q + G P TYN ++ C
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ +++AY ++DEMR+ G+ P+ +YD ++ L K G+ + A VF+ S P V
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD-CPPDV 182
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
Y ++ C ++D A +++++M+ P + ++ L++ LC D+L +A + +
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242
Query: 282 MLDIGIRPPGQLFSNLKQALRDEG 305
M D P +S+L L G
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTG 266
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 1/207 (0%)
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
C+ + + +I+GL RL EA +F + KK+G P TYN ++ +C +++ AY
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++ EM++ G+ PN TY V+H + + + AY +F++M G P + TY ++
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVEN-GCMPNLVTYNTLLSG 121
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C N +D A + DEM+ RG+ P Y TL+ LC K+D A K F++ + P
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD 181
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKI 317
+S L L G + A L +K+
Sbjct: 182 VVAYSTLIAGLCKTGRLDEACKLFEKM 208
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 116/247 (46%), Gaps = 5/247 (2%)
Query: 6 LKQE-LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
LKQ LPD F+ L++ C + V+ A+ + ++M PD+ +YT L++G+ + +
Sbjct: 384 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 443
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ V + M G +P+VV+Y +I+A C A + A +L EM +P+ + +L
Sbjct: 444 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSL 503
Query: 122 INGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I G L EA + + + + + Y ++ C + R++ A +++ +++ G
Sbjct: 504 IGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 563
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P Y ++ L + +A V + M+ + P YE V++ + + A
Sbjct: 564 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 623
Query: 241 MRIWDEM 247
+ DE+
Sbjct: 624 NALADEL 630
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 2/178 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + + LID C++ A ++ ++M P++ +Y L+ G+ +
Sbjct: 453 MAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGD 512
Query: 61 LLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L ++ + +D+ + D+ +Y +M++ C R A+EL ++ + P I+
Sbjct: 513 LEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 572
Query: 120 TLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
LI GL K L +A++ + + R P A Y AV+ R +A + DE+
Sbjct: 573 ALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 630
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 159/324 (49%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ N LI++ C A V K+ K PD ++T L+ G +
Sbjct: 93 MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +GF+P+VV+YG +IN C + A+ L R ME NC+P ++ +
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++++EA F + +G P+ TY +++ + C ++++M
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + V+ L K G+ EA+ V M + G EP V TY ++ C +++D A
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR-GVEPNVVTYNALMDGHCLQSEMDEA 331
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M G P + Y+TLIN C ++D A F+EM + P ++ L
Sbjct: 332 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHG 391
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A+ L ++ + P
Sbjct: 392 LCHVGRLQDAIALFHEMVAHGQIP 415
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 149/304 (49%), Gaps = 4/304 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD F+ ++D LCK + A +V D M R +P++ +Y L++G Q + +
Sbjct: 274 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVK 333
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ M +G+ P+V+SY +IN +C +R D+A LF EM P+ + TL++GL
Sbjct: 334 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLC 393
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL +A+ F + G P+ TY ++ C +++A ++ + + P+ +
Sbjct: 394 HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 453
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y IV+ + +AG E A +F +S K G P V TY I++ C +D A +++ E
Sbjct: 454 IYTIVIDGMCRAGELEAARDIFSNLSSK-GLRPNVRTYTIMINGLCRRGLLDEANKLFME 512
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G P Y+T+ L + A + QEML G + L + L D+ +
Sbjct: 513 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKL 572
Query: 307 EETA 310
+++
Sbjct: 573 DQSV 576
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 158/352 (44%), Gaps = 36/352 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M++ + ++ + +ID+LCK R V A +F KM + PDI +YT L+
Sbjct: 198 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 257
Query: 55 WGQQKNLLSM-----------------------------NEVYREMKDDGFEPDVVSYGI 85
W LL+ ++V M G EP+VV+Y
Sbjct: 258 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 317
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+++ HC DEAV++F M P+ + TLING +R+ +A F + ++
Sbjct: 318 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 377
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P TYN ++ C R+ DA + EM G P+ TY I+L +L K +EA
Sbjct: 378 LIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 437
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ K + +P + Y IV+ C +++ A I+ + ++G+ P + Y+ +IN
Sbjct: 438 ALLKTI-EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMING 496
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
LC LD+A K F EM G P G ++ + Q L A+ L Q++
Sbjct: 497 LCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 548
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F++M P + LL + K ++ + +M G PDV + I
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN+ C R A + ++ +P F TLI GL E ++ +AL F + G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+P TY ++ C N A R++ M + P+ Y ++ L K + EA+
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++F +M + G P + TY ++ C + + ++M ++P + ++ST++++
Sbjct: 228 NLFSKMVGQ-GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 286
Query: 266 LCHEDKLDDACKYFQEMLDIGIRP 289
LC E K+ +A M+ G+ P
Sbjct: 287 LCKEGKITEAHDVVDMMIIRGVEP 310
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N LI+ CK + +++A +F++M ++ P+ +Y L+ G L
Sbjct: 342 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDA 401
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G PD+ +Y I+++ C DEA+ L + +E +N P I+ +I+G
Sbjct: 402 IALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDG 461
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L A F +G P TY ++ C +++A ++ EM G P+
Sbjct: 462 MCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPD 521
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
TY+ + L++ A + + M + G VST ++V M C
Sbjct: 522 GCTYNTITQGLLQNKEALRAIQLLQEMLAR-GFSADVSTTTLLVEMLC 568
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++DA + M P+T ++ +L + K + +S+ +M G P V T
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSF-GIPPDVYTLN 106
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
I++ FC+ + A + ++ G+ P ++TLI LC E K+ DA F +M+
Sbjct: 107 ILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 166
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
G +P + L L G A+ L + +++
Sbjct: 167 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ 200
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + + +I+ LC+ ++ A ++F +M PD +Y + +G Q K L
Sbjct: 482 GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRA 541
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
++ +EM GF DV + +++ C K D++V+
Sbjct: 542 IQLLQEMLARGFSADVSTTTLLVEMLCDDK-LDQSVK 577
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 170/334 (50%), Gaps = 20/334 (5%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+K PD + L++ L K+ V+ A+ FD M +R P+I +Y +L++ + + L
Sbjct: 128 IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLD 187
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ EMK GF+P VV+Y I+++A CSA R A +LF +M C P + + TL+
Sbjct: 188 MALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLV 247
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGLG R+ EA + F + RG + YN+++ + ++ +++M EM + G
Sbjct: 248 NGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFH 307
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ +++ ++ L KA + + A VF RM + G +P + +Y I++ + A +
Sbjct: 308 PDAFSFNTIMDALGKANKPDAAREVFARMV-ESGCKPDLISYNILIDSYARFGDAAQARQ 366
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP------------- 289
+ +EM G +P Y++LI+ L + ++D+A +EM G RP
Sbjct: 367 MLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLG 426
Query: 290 ---PGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
Q + L Q ++D+G+E + A +ID L
Sbjct: 427 KRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGL 460
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 146/288 (50%), Gaps = 1/288 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ F + F +LID L S ERA+ V+ K+ ++ D +Y +L+ +G+ L
Sbjct: 57 ESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQL 116
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
S E++REMK G EPD +YG ++NA A R EA F M P+ + L
Sbjct: 117 DSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLL 176
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++ +L AL F + K+RGF+P TYN ++ A C + R+ A ++ +M G
Sbjct: 177 MDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGC 236
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P++ TY +++ L K+GR EEA+ VF+ M + G + Y ++ +D
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDR-GVAVDLVNYNSLLATLAKAGNMDRVW 295
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ EM +G P ++T++++L +K D A + F M++ G +P
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP 343
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 147/286 (51%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +N L+D LC + V A+++F KM PD +Y+ L+ G G+
Sbjct: 196 MKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGR 255
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++V+REM D G D+V+Y ++ A D +L +EM P F T
Sbjct: 256 VEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNT 315
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ LG + A + F + + G +P+ +YN ++ +Y A +M++EM + G
Sbjct: 316 IMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG 375
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P T+TY+ ++H L G+ +EA++V + M G P V TY ++ M + A
Sbjct: 376 FIPETKTYNSLIHWLATDGQVDEAFAVLEEME-TAGCRPDVVTYNRLMDMLGKRGENQRA 434
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
R++ +MK +GV P Y+ I+ L +D+LD+A F++M +G
Sbjct: 435 ARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 9/281 (3%)
Query: 50 ILLEGWGQQKNLLSMNEVYREMKDDG--FEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
++L WG L + + +EM +G P+ + +I A+ + +A +LF + E
Sbjct: 3 VVLASWGI---LDPLETLLKEMVAEGRPLRPNTLVK--LITAYGRGNKSGDAFDLFNQAE 57
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
+ C P+ H F LI+ L + A + + ++G + + YN ++ + S +++
Sbjct: 58 SFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLD 117
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
A M EM+ G P+ TY +++ L KAGR +EA S F M + G P + TY ++
Sbjct: 118 SAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLER-GLTPNIPTYNLL 176
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ F Q+DMA+ ++ EMK RG P + Y+ L+++LC ++ A K F +M G
Sbjct: 177 MDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGC 236
Query: 288 RPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTPLVD 327
P +S L L G +EE V + +D+ LV+
Sbjct: 237 SPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVN 277
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 164/324 (50%), Gaps = 5/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + FN LI C++ V+ A+++FDKM R F D+ SY L+EG +
Sbjct: 179 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 238
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ EM +PD+ Y ++ C+A+R +E + + R M+ +PS +
Sbjct: 239 IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 294
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ E++ EA + + ++G P T AV+ AYC R++DA R+++ M+ G
Sbjct: 295 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 354
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+ ++ G+ +A ++ +M R G P TY +++R C + ++ A
Sbjct: 355 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKM-RACGVNPDAVTYNLLIRGQCIDGHIESA 413
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ M+ G++ + Y+ LIN+LC + + D AC F + GI+P F++L
Sbjct: 414 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 473
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A +K+ TP
Sbjct: 474 LCKSGKADIAWKFLEKMVSAGCTP 497
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +I+ CK + A V + MK R P++ +Y L++G+ + +
Sbjct: 319 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 378
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M+ G PD V+Y ++I C + A L R ME + + LIN
Sbjct: 379 MTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 438
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R +A F + RG +P A T+N+++ C S + + A++ +++M G P+
Sbjct: 439 LCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPD 498
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY + HL K ++E S M +K +P+ Y IV+ + R W
Sbjct: 499 TYTYSSFIEHLCKMKGSQEGLSFIGEMLQK-DVKPSTVNYTIVIHKLLKERNYGLVARTW 557
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM + G P + Y+T + + C E +L++A EM G+ ++ L
Sbjct: 558 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI 617
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G + AV + +++ + P
Sbjct: 618 GQTDHAVSILKQMTSVASVP 637
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 138/277 (49%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ LC + E + +MK+ + P ++Y +++ +++ E+ +EM
Sbjct: 257 YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMF 316
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P VV+ +INA+C R +A+ + M+ CKP+ + L+ G +E ++
Sbjct: 317 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 376
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ + + G P+A TYN ++ C I A+R++ M G+ + TY+ ++
Sbjct: 377 KAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 436
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K GRT++A S+F + + G +P T+ ++ C + + D+A + ++M + G
Sbjct: 437 NALCKDGRTDQACSLFDSLETR-GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGC 495
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + YS+ I LC + + EML ++P
Sbjct: 496 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 532
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 126/323 (39%), Gaps = 18/323 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K FN LI+ LCKS + A + +KM PD +Y+ +E + K
Sbjct: 459 GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 518
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM +P V+Y I+I+ + Y + EM ++ C P + T +
Sbjct: 519 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 578
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E RL+EA + K G + YN ++ + + + A ++ +M PN
Sbjct: 579 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 638
Query: 185 TRTYDIVLHHLI-----------------KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
TY I+L HL+ KA + + +F M +K P TY +
Sbjct: 639 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM-KKNEFLPNSGTYSSI 697
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ F + + + A + MK + +Y+ L+ C + DA M+ G
Sbjct: 698 LEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGF 757
Query: 288 RPPGQLFSNLKQALRDEGMEETA 310
P + +L L EG + A
Sbjct: 758 IPQLMSYQHLLSGLICEGQTDKA 780
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 39/270 (14%)
Query: 99 AVELFREMEATNCKPSPH--IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
A+ LF M + P+P + +I L L+ AL++ + G+ P+A T+N++
Sbjct: 136 ALRLFAHMH-RHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSL 194
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS---- 212
+ YC + +++ A + D+M G + +Y ++ L +AGR +EA +F M
Sbjct: 195 IVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDM 254
Query: 213 --------------------------RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
++ G P+ Y VV C + A + E
Sbjct: 255 HMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQE 314
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M +G+ P + + +IN+ C E ++ DA + + M G +P ++ L Q +EG
Sbjct: 315 MFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGK 374
Query: 307 EETAVVLAQKIDKLRKTP------LVDRGQ 330
A+ L K+ P L+ RGQ
Sbjct: 375 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 404
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 115/313 (36%), Gaps = 53/313 (16%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ +I L K R+ + +M +PD+ +YT + + + L
Sbjct: 530 VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 589
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN-- 123
V EM +G D ++Y +++ H S + D AV + ++M + P+ + L+
Sbjct: 590 NVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 649
Query: 124 ---------------GLGSEKRLSEALQFFGQSKKRGFEPEAPTYN-------------- 154
G+ L++ F KK F P + TY+
Sbjct: 650 VRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEE 709
Query: 155 ---------------------AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+V +C S R DA+ ++ M + G P +Y +L
Sbjct: 710 ATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLS 769
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
LI G+T++A +F SR P +++++ D++ + ++
Sbjct: 770 GLICEGQTDKAKEIFMN-SRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCR 828
Query: 254 PVMHMYSTLINSL 266
P Y+ L L
Sbjct: 829 PSHQTYAMLTEEL 841
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
R + +L HL + A +F M R PT TY V+R C A + A+R
Sbjct: 118 RPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLS 177
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M G P + +++LI C +++D A F +M G ++ L + L + G
Sbjct: 178 LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAG 237
Query: 306 MEETAVVLAQKIDK 319
+ AV L ++D+
Sbjct: 238 RIDEAVELFGEMDQ 251
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 170/341 (49%), Gaps = 17/341 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N +ID + K +E A+ +F++MK R PD +Y +++G+G+ L
Sbjct: 128 GSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDT 187
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EMK EPDV++Y +IN C + + + +E +REM+ + KP+ + TL++
Sbjct: 188 VYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDA 247
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + +A++F+ ++ G P TY ++V A C ++DA+R+ +EM + G+ N
Sbjct: 248 FCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWN 307
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L A R +EA +F +M G P +++Y ++ F +D A+ +
Sbjct: 308 VVTYTALIDGLCDAERMKEAEKLFGKMV-TAGVIPNLASYNALIHGFVKAKNMDRALELL 366
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+E+K RG+ P + +Y T I LC +K++ A EM + GI+ +++ L A
Sbjct: 367 NELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKS 426
Query: 305 G----------------MEETAVVLAQKIDKLRKTPLVDRG 329
G E T V ID L K LV +
Sbjct: 427 GNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKA 467
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 164/339 (48%), Gaps = 19/339 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + ++ L+D CK +++A + + M++ P+ +YT L++ + N
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGN 288
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM + G E +VV+Y +I+ C A+R EA +LF +M P+ +
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNA 348
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G K + AL+ + K RG +P+ Y + C +I A +M+EM++ G
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I NT Y ++ K+G E + + M ++ E TV T+ +++ C N V A
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEM-QELDHEVTVVTFCVLIDGLCKNKLVSKA 467
Query: 241 MRIWDEMKAR-GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS---- 295
+ + M G+ P +Y+ +I+ LC E+++ A F++M G+ P ++
Sbjct: 468 IDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMD 527
Query: 296 -NLKQ-------ALRDEGMEETAVVLAQKIDKLRKTPLV 326
NLKQ ALRD+ E + K+D L T LV
Sbjct: 528 GNLKQGNMLEALALRDKMAE-----IGMKLDLLAYTSLV 561
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L L +E A + F KMK+ R P +S LL + + + +++M
Sbjct: 66 FDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 125
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P V +Y IMI+ + A LF EM+ P + ++I+G G RL
Sbjct: 126 GAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + FF + K EP+ TYN+++ +C S ++ EM++ G+ PN +Y ++
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLV 245
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K ++A + M R+ G P TY +V C + A R+ +EM GV
Sbjct: 246 DAFCKEDMMQQAIKFYVDM-RRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+ LI+ LC +++ +A K F +M+ G+ P
Sbjct: 305 EWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIP 341
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 116/272 (42%), Gaps = 19/272 (6%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN------------------CK 112
M +GF + SY I+ + A+ Y +A + RE+ + C
Sbjct: 1 MNRNGFNHTIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCV 60
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P +F L + L L EA Q F + K+ P+ + N ++ + + + R
Sbjct: 61 PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+M G P TY+I++ + K G E A +F+ M + G P TY ++ +
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFR-GLIPDTVTYNSMIDGYG 179
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
++D + ++EMK+ P + Y++LIN C KL ++++EM G++P
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239
Query: 293 LFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+S L A E M + A+ + ++ P
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVP 271
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ FGL+ + +ID LCK V+ A +F++M + PD +YT L++G +Q N+
Sbjct: 476 NDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNM 535
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
L + +M + G + D+++Y ++ + +A EM
Sbjct: 536 LEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEM 580
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
F LID LCK++ V +A + F +M P+ YT +++G ++ + + ++ +M
Sbjct: 451 FCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQM 510
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+G PD +Y +++ + EA+ L +M K + +L+ G +L
Sbjct: 511 AQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQL 570
Query: 132 SEALQFF 138
+A F
Sbjct: 571 QKARSFL 577
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 169/338 (50%), Gaps = 17/338 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I +CK + A+ +F++MKK PDI +Y L++G+G+ L
Sbjct: 127 GIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDES 186
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMK G EPDV++Y +IN+ C K A E FREM+ + KP+ + TLI+
Sbjct: 187 VCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDA 246
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E + A++FF + G P TY++++ A C + + +A+ + DEM + + N
Sbjct: 247 LCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLN 306
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L L + G EA +F+ M K G P + Y ++ +D AM ++
Sbjct: 307 IVTYTTLLDGLCEEGMMNEAEELFRAMG-KAGVTPNLQAYTALIHGHIKVRSMDKAMELF 365
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--------- 295
+EM+ + + P + ++ T++ LC E KL++ EM + GI +++
Sbjct: 366 NEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKA 425
Query: 296 -------NLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
NL + +RD G E T V ID L K LV
Sbjct: 426 GNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLV 463
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 155/320 (48%), Gaps = 2/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ LID CK+ ++ A + D+M + D +I +YT LL+G ++
Sbjct: 263 MTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGM 322
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++R M G P++ +Y +I+ H + D+A+ELF EM + KP ++ T
Sbjct: 323 MNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGT 382
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL SE +L E + K+ G Y ++ AY + +A +++EMR G
Sbjct: 383 IVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLG 442
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
T+ ++ L K G +EA F RM +P V+ Y ++ C N + A
Sbjct: 443 TEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHD-LQPNVAVYTALIDGLCKNNCIGDA 501
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++DEM+ + ++P Y+ +I+ +A +M+++GI +++L
Sbjct: 502 KKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWG 561
Query: 301 LRDEG-MEETAVVLAQKIDK 319
L G +++ LA+ I K
Sbjct: 562 LSQCGQVQQARKFLAEMIGK 581
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 144/311 (46%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL ++ +N LID K ++ + +F++MK +PD+ +Y L+ + + K
Sbjct: 158 MKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKG 217
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L E +REMKD +P+V+SY +I+A C A++ F +M P+ + +
Sbjct: 218 MLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSS 277
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L EA + + + TY ++ C +N+A + M K G
Sbjct: 278 LIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAG 337
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN + Y ++H IK ++A +F M R+ +P + + +V C ++++
Sbjct: 338 VTPNLQAYTALIHGHIKVRSMDKAMELFNEM-REKDIKPDILLWGTIVWGLCSESKLEEC 396
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I EMK G+ +Y+TL+++ +A +EM D+G F L
Sbjct: 397 KIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDG 456
Query: 301 LRDEGMEETAV 311
L G+ + A+
Sbjct: 457 LCKRGLVQEAI 467
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 136/287 (47%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ L + LI K R +++A E+F++M+++ PDI + ++ G +
Sbjct: 333 MGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESK 392
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EMK+ G + V Y +++A+ A EA+ L EM + + FC
Sbjct: 393 LEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCA 452
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + EA+ +FG+ +P Y A++ C + I DA ++ DEM+
Sbjct: 453 LIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKN 512
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ Y ++ +K G +EA ++ +M + G E + Y +V QV A
Sbjct: 513 MIPDKIAYTAMIDGNLKHGNFQEALNMRNKM-MEMGIELDLYAYTSLVWGLSQCGQVQQA 571
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ EM +G++P + + L+ +D+A + E+++ G+
Sbjct: 572 RKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
FF G P TYN ++G C + A + ++M+K G+ P+ TY+ ++
Sbjct: 119 FFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K G +E+ +F+ M + G EP V TY ++ FC + A + EMK + + P +
Sbjct: 179 KIGLLDESVCLFEEM-KFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
YSTLI++LC E + A K+F +M +G+ P +S+L A G A +LA +
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297
Query: 317 I 317
+
Sbjct: 298 M 298
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 12/330 (3%)
Query: 1 MDKFGLKQELP-DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
+D F + P DF L+DTLCK HV A EVF+K K F P +K YT+L+ GW +
Sbjct: 163 IDAFSETKTTPQDFCVLLDTLCKYGHVRLAVEVFNK-NKHTFPPTVKMYTVLIYGWCKIG 221
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHC------SAKRYDEAV----ELFREMEAT 109
+ + EM D G EP+VV+Y +++N C +R++ + E+F +M +
Sbjct: 222 RIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEEVFDQMRES 281
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+P F L++ + L K++G P Y +V+ + DA
Sbjct: 282 GIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVIKCLASCGWLEDA 341
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
R++ EM + G+ P TY+ E A +FKRM P+ TY I++R
Sbjct: 342 ERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLCMPSSHTYVILIR 401
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
MF + + IW +MK G P + +Y+ LI+ LC + +AC YF EM++ G P
Sbjct: 402 MFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREACHYFVEMIENGFLP 461
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
F +L + L M T L +K+D+
Sbjct: 462 LKGTFESLYRGLIQADMLRTWRRLKKKLDE 491
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 150/311 (48%), Gaps = 2/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ FN L+D+LCK + + A E+F + + PDI SY+ILL G+ +
Sbjct: 368 MTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGR 427
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ MN ++ M D+G D + I+INAH DEA+ +F EM P+ + T
Sbjct: 428 FVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYAT 487
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L RL++A++ Q G +P Y++++ +C + A ++ EM G
Sbjct: 488 VIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQG 547
Query: 181 IG-PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I PN + ++H L GR A VF + G P + T+ ++ +C ++D
Sbjct: 548 IPRPNITFFSSIIHSLCNEGRVMNAQDVFN-LVIHIGDRPDIFTFNSLIDGYCLVGKMDK 606
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + D M + G P + YSTLIN ++DD F+EML ++P +S +
Sbjct: 607 AFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLD 666
Query: 300 ALRDEGMEETA 310
L G A
Sbjct: 667 GLFRAGRTSAA 677
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N ++ LCK+R +++A+ V +M PD +YT ++ G+
Sbjct: 302 GVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEA 361
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++EM +G PD+V++ ++++ C KR EA E+F + KP + L++G
Sbjct: 362 AKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHG 421
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+E R + F G ++ +N ++ A+ +++A + EMR G+ PN
Sbjct: 422 YATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPN 481
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY V+ L + GR +A +M G +P Y +++ FC + + A +
Sbjct: 482 VVTYATVIAALCRMGRLADAMEKLSQMI-SIGLKPNTVVYHSLIQGFCTHGDLIKAKELV 540
Query: 245 DEMKARGV-LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
EM +G+ P + +S++I+SLC+E ++ +A F ++ IG RP F++L
Sbjct: 541 SEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSL 594
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 149/306 (48%), Gaps = 2/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQK 59
M + G + +N +I +LC + A ++ +M K PD+ SYT+++ G +
Sbjct: 227 MSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEG 286
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ ++ EM G P+VV+Y +++A C A+ D+A + R+M + +P +
Sbjct: 287 EISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYT 346
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+G R EA + F + + G P+ T+N+++ + C R +A + +
Sbjct: 347 AMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ +Y I+LH GR + ++F M+ G + I++ +D
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDN-GIVADSHCFNILINAHAKRGMMDE 465
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ I+ EM+ +GV P + Y+T+I +LC +L DA + +M+ IG++P ++ +L Q
Sbjct: 466 ALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQ 525
Query: 300 ALRDEG 305
G
Sbjct: 526 GFCTHG 531
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 144/302 (47%), Gaps = 2/302 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + +I L + +A +F++M ++ P++ +Y ++ + + +
Sbjct: 267 GCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKA 326
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V R+M D+ +PD V+Y MI+ + R+ EA ++F+EM P F +L++
Sbjct: 327 ELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDS 386
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L KR EA + F +G +P+ +Y+ ++ Y R D + M GI +
Sbjct: 387 LCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVAD 446
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ ++I+++ K G +EA +F M R G P V TY V+ C ++ AM
Sbjct: 447 SHCFNILINAHAKRGMMDEALLIFTEM-RGQGVSPNVVTYATVIAALCRMGRLADAMEKL 505
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI-RPPGQLFSNLKQALRD 303
+M + G+ P +Y +LI C L A + EM+D GI RP FS++ +L +
Sbjct: 506 SQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCN 565
Query: 304 EG 305
EG
Sbjct: 566 EG 567
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 149/321 (46%), Gaps = 2/321 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + +I LC+ + A E +M P+ Y L++G+ +L+
Sbjct: 477 GVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKA 536
Query: 65 NEVYREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E+ EM D G P++ + +I++ C+ R A ++F + +P F +LI+
Sbjct: 537 KELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLID 596
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G ++ +A G EP+ TY+ ++ Y S RI+D + EM + P
Sbjct: 597 GYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKP 656
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
T TY +VL L +AGRT A +F M + GT ++STY I+++ C N D A+ +
Sbjct: 657 TTVTYSLVLDGLFRAGRTSAAKKMFHEMI-ESGTAMSISTYTIILQGLCRNNCTDEAITL 715
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ ++ A + + + +T+I++L + ++A F + G+ P + + L
Sbjct: 716 FHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLK 775
Query: 304 EGMEETAVVLAQKIDKLRKTP 324
EG E A ++ ++K P
Sbjct: 776 EGSVEEADIMFSSMEKTGCAP 796
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 140/303 (46%), Gaps = 3/303 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPD-IKSYTILLEGWGQQKNLLSMNEVYREM 71
+ L+D C++R + F ++ + D I + T L ++ +++ + M
Sbjct: 168 YGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRM 227
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVE-LFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ G PD SY +I + C R EA++ L R + C P + +I+GL E
Sbjct: 228 SELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGE 287
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+S+A F + ++G P TYN++V A C + ++ A ++ +M I P+ TY
Sbjct: 288 ISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTA 347
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++H GR +EA +FK M+R+ G P + T+ ++ C + + A I+ + +
Sbjct: 348 MIHGYSCLGRWKEAAKMFKEMTRE-GLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATK 406
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G P + YS L++ E + D F M D GI F+ L A GM + A
Sbjct: 407 GHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEA 466
Query: 311 VVL 313
+++
Sbjct: 467 LLI 469
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 143/319 (44%), Gaps = 2/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQK 59
M GLK ++ LI C + +A+E+ +M + P+I ++ ++ +
Sbjct: 508 MISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEG 567
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+++ +V+ + G PD+ ++ +I+ +C + D+A + M + +P +
Sbjct: 568 RVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYS 627
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TLING R+ + L F + + +P TY+ V+ + R + A +M EM +
Sbjct: 628 TLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIES 687
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G + TY I+L L + T+EA ++F ++ + ++ ++ + +
Sbjct: 688 GTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAM-NLKFEIAILNTMIHALYKVKRREE 746
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ + A G++P Y +I +L E +++A F M G P +L +++ +
Sbjct: 747 AHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIR 806
Query: 300 ALRDEGMEETAVVLAQKID 318
L +G A K+D
Sbjct: 807 MLLQKGEIVKAGYYMSKVD 825
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 5/233 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + ++ ++ LI+ KS ++ +F +M +R P +Y+++L+G +
Sbjct: 614 MVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGR 673
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM + G + +Y I++ C DEA+ LF ++ A N K I T
Sbjct: 674 TSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNT 733
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L KR EA F G P A TY ++ + +A M M K G
Sbjct: 734 MIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTG 793
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV--STYEIVVRMF 231
P++R + ++ L++ G +A MS+ GT ++ ST +++ +F
Sbjct: 794 CAPSSRLLNDIIRMLLQKGEIVKAG---YYMSKVDGTIISLEASTTSLLISLF 843
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 4/240 (1%)
Query: 65 NEVYREMKDDGFEPDVV-SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
N + RE P V +YGI+++ C A+R D F + + + T +
Sbjct: 149 NRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLK 208
Query: 124 GLGSEKRLSEALQ-FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC-GI 181
L KR EAL + + G P+A +YN V+ + C R +A M+ M K G
Sbjct: 209 CLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGC 268
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ +Y +V+H L G +A ++F M +K G P V TY +V C +D A
Sbjct: 269 SPDVVSYTMVIHGLFMEGEISKACNLFNEMVQK-GVVPNVVTYNSIVHALCKARAMDKAE 327
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ +M + P Y+ +I+ + +A K F+EM G+ P F++L +L
Sbjct: 328 LVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSL 387
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ ++D L ++ A+++F +M + I +YTI+L+G +
Sbjct: 654 VKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAI 713
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ ++ + ++ MI+A KR +EA +LF + A+ P+ + +I L
Sbjct: 714 TLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINL 773
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
E + EA F +K G P + N ++ I A M ++ I
Sbjct: 774 LKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEA 833
Query: 186 RTYDIVLHHLIKAGRTEE 203
T +++ GR E
Sbjct: 834 STTSLLISLFASKGRYRE 851
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 160/312 (51%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LC A V D+M +RR PD+ +YTILLE ++ ++ EM+
Sbjct: 35 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 94
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PD+V+Y +++N C R D+A+E + + + C+P+ + ++ GL + +R
Sbjct: 95 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 154
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + G+ ++G P T+N ++ C + A +++++ K G PN+ +Y+ +L
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 214
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H K + ++A + M + G P + +Y ++ C + +VD+A+ + ++K +G
Sbjct: 215 HAFCKQKKMDKAMAFLDLMVSR-GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 273
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
PV+ Y+T+I+ L K +A + EM+ G++P +S + L E E A+
Sbjct: 274 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333
Query: 313 LAQKIDKLRKTP 324
K+ + P
Sbjct: 334 AFGKVQDMGIRP 345
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 10/308 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
+N ++ C + ++ A+ + +M +PD +Y L+ G G+ N L+ V
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALA---VLD 56
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM PDVV+Y I++ A C Y +A++L EM C P + ++NG+ E
Sbjct: 57 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R+ +A++F G EP +YN V+ C + R DA +M EM + G PN T++
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ L + G E A V +++ K G P +Y ++ FC ++D AM D M +
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIP-KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 235
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
RG P + Y+TL+ +LC ++D A + ++ D G P ++ + L G +
Sbjct: 236 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 295
Query: 310 AVVLAQKI 317
A+ L ++
Sbjct: 296 ALELLNEM 303
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 163/348 (46%), Gaps = 39/348 (11%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D+ ++ +PD + L++ CK ++A ++ D+M+ + PDI +Y +++ G Q
Sbjct: 55 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 114
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS--- 114
+ + E + + G EP+ VSY I++ C+A+R+++A EL EM C P+
Sbjct: 115 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 174
Query: 115 ------------------------PHIFCT--------LINGLGSEKRLSEALQFFGQSK 142
P CT L++ +K++ +A+ F
Sbjct: 175 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 234
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
RG P+ +YN ++ A C S ++ A ++ +++ G P +Y+ V+ L KAG+T+
Sbjct: 235 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 294
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA + M K G +P + TY + C +++ A+R + +++ G+ P +Y+ +
Sbjct: 295 EALELLNEMVSK-GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 353
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
I LC + A F M+ G P ++ L + L EG+ + A
Sbjct: 354 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 401
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI LC+ VE A EV +++ K P+ SY LL + +QK
Sbjct: 163 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 222
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G PD+VSY ++ A C + D AVEL +++ C P + T
Sbjct: 223 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 282
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + EAL+ + +G +P+ TY+ + C RI DA R +++ G
Sbjct: 283 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 342
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PNT Y+ ++ L K T A +F M G P STY I++ Y + A
Sbjct: 343 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN-GCMPNESTYTILIEGLAYEGLIKEA 401
Query: 241 MRIWDEMKARG 251
+ DE+ +R
Sbjct: 402 RDLLDELCSRA 412
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 5/249 (2%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K+G +N L+ CK + +++A D M R PDI SY LL + +
Sbjct: 200 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 259
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E+ ++KD G P ++SY +I+ A + EA+EL EM + +P + T+
Sbjct: 260 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 319
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GL E R+ +A++ FG+ + G P YNA++ C + A + M G
Sbjct: 320 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 379
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF-----CYNAQV 237
PN TY I++ L G +EA + + + G E + + I V C NA
Sbjct: 380 PNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLIDVAFLTTFLPCSNANG 439
Query: 238 DMAMRIWDE 246
+R+ E
Sbjct: 440 GPFLRLPPE 448
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 163/324 (50%), Gaps = 5/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + FN LI C++ V+ A+++FDKM R F D+ SY L+EG+ +
Sbjct: 37 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGR 96
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ EM +PD+ Y ++ C A R +E + + R M+ +PS +
Sbjct: 97 IDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAA 152
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ E++ EA + + ++G P T AV+ AYC R++DA R+++ M+ G
Sbjct: 153 VVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 212
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+ ++ G+ +A ++ +M R G P TY +++R C + ++ A
Sbjct: 213 CKPNVWTYNALVQGFCNEGKVHKAMALLNKM-RVCGVNPDAVTYNLLIRGQCIDGHIESA 271
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ M+ G++ + Y+ LIN+LC + + D AC F + GI+P F++L
Sbjct: 272 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 331
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A +K+ TP
Sbjct: 332 LCKSGKVDIAWKFLEKMVSAGCTP 355
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 144/320 (45%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +I+ CK + A V + MK R P++ +Y L++G+ + +
Sbjct: 177 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 236
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M+ G PD V+Y ++I C + A L R ME + + LIN
Sbjct: 237 MALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 296
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R +A F + RG +P A T+N+++ C S +++ A++ +++M G P+
Sbjct: 297 LCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPD 356
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY + HL K ++E S M +K +P+ Y IV+ + R W
Sbjct: 357 TYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD-VKPSTVNYTIVIHKLLKERNYGLVARTW 415
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM + G P + Y+T + + C E +L++A EM G+ ++ L
Sbjct: 416 GEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASI 475
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G + AV + +++ + P
Sbjct: 476 GQTDHAVSILKQMTSVASVP 495
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 139/277 (50%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ LCK+ E + +MK+ + P ++Y +++ ++ E+ +EM
Sbjct: 115 YAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMF 174
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P VV+ +INA+C R +A+ + M+ CKP+ + L+ G +E ++
Sbjct: 175 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 234
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ + + G P+A TYN ++ C I A+R++ M G+ + TY+ ++
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 294
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K GRT++A S+F + + G +P T+ ++ C + +VD+A + ++M + G
Sbjct: 295 NALCKDGRTDQACSLFDSLETR-GIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGC 353
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + YS+ I LC + + EML ++P
Sbjct: 354 TPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 390
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 11/255 (4%)
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+Y +I + C A+ M + +P + F +LI G ++ A F +
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
RGF + +Y A++ +C + RI++A + EM + P+ Y ++ L KAGR
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EE + +RM ++ G P+ Y VV C+ + A + EM +G+ P + +
Sbjct: 129 EEGLLMLRRM-KELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
+IN+ C E ++ DA + + M G +P ++ L Q +EG A+ L K+
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247
Query: 322 KTP------LVDRGQ 330
P L+ RGQ
Sbjct: 248 VNPDAVTYNLLIRGQ 262
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 127/323 (39%), Gaps = 18/323 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K FN LI+ LCKS V+ A + +KM PD +Y+ +E + K
Sbjct: 317 GIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 376
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM +P V+Y I+I+ + Y + EM ++ C P + T +
Sbjct: 377 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 436
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E RL+EA + K G + YN ++ + + + A ++ +M PN
Sbjct: 437 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 496
Query: 185 TRTYDIVLHHLI-----------------KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
TY I+L HL+ KA + + +F M +K P TY +
Sbjct: 497 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM-KKNEFLPNSGTYSSI 555
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ F + + + A + MK + +Y+ L+ C + DA M+ G
Sbjct: 556 LEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGF 615
Query: 288 RPPGQLFSNLKQALRDEGMEETA 310
P + +L L EG + A
Sbjct: 616 IPHLMSYQHLLSGLICEGQTDKA 638
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 116/313 (37%), Gaps = 53/313 (16%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ +I L K R+ + +M +PD+ +YT + + + L
Sbjct: 388 VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 447
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN-- 123
V EM +G D ++Y +++ H S + D AV + ++M + P+ + L+
Sbjct: 448 NVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 507
Query: 124 ---------------GLGSEKRLSEALQFFGQSKKRGFEPEAPTYN-------------- 154
G+ L++ F KK F P + TY+
Sbjct: 508 VRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEE 567
Query: 155 ---------------------AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+V +C S R DA+ ++ M + G P+ +Y +L
Sbjct: 568 ATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLS 627
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
LI G+T++A +F SR P +++++ D++ + ++
Sbjct: 628 GLICEGQTDKAKEIFMN-SRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCR 686
Query: 254 PVMHMYSTLINSL 266
P Y+ L L
Sbjct: 687 PSHQTYAMLTEEL 699
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 155/313 (49%), Gaps = 5/313 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G Q+L FN ++D LCKS+ VE A K+ + +F D+ SY I+ GW K
Sbjct: 173 MREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKR 232
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
EV +EM + G P + +Y I++ + A + EA E F +M+ + + T
Sbjct: 233 TPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTT 292
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++G G + A + F + G P TYNA++ C + +A M +EM K G
Sbjct: 293 MVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKG 352
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY++V+ L AG ++A +RM + G EP V TY + +R FC V+
Sbjct: 353 YVPNLTTYNVVIRGLFHAGNMDKAMEFIERM-KTDGCEPNVQTYNVAIRYFCDAGDVEKG 411
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFSNL 297
+ ++++M +G LP + Y+ LI+++ K +D A K EM+D G P F+ +
Sbjct: 412 LSMFEKM-GQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRV 470
Query: 298 KQALRDEGMEETA 310
L G + A
Sbjct: 471 LNGLLLTGNQAFA 483
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
G+ ++ ++ + M+ P ++ I+ +A + D A+++F M C
Sbjct: 123 GRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDL 182
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
H F T+++ L KR+ A + + F+ + +YN + +C R A ++ E
Sbjct: 183 HSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKE 242
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M + G+ P TY+I+L +AG+ +EA+ F +M + E V TY +V F
Sbjct: 243 MVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKERE-VEIDVVTYTTMVHGFGVVG 301
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
++ A ++++EM G+LP Y+ +I LC +D +++A F+EM+ G P ++
Sbjct: 302 EIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYN 361
Query: 296 NLKQALRDEGMEETAVVLAQKI 317
+ + L G + A+ +++
Sbjct: 362 VVIRGLFHAGNMDKAMEFIERM 383
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 171/339 (50%), Gaps = 17/339 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +ID LCK +E ++ +F +M++ PD+ +Y L++G+G+ +L +
Sbjct: 284 GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEV 343
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMKD G PD+++Y +IN +C ++ A E F EM+ KP+ + TLI+
Sbjct: 344 ASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 403
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + A++ F ++ G P TY +++ A C + + +A++++++M + G+ N
Sbjct: 404 FCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 463
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L L KAGR EA VF+ M K G P Y +V + +++ AM+I
Sbjct: 464 IVTYTALLDGLCKAGRMIEAEEVFRSM-LKDGISPNQQVYTALVHGYIKAERMEDAMKIL 522
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--------- 295
+M + P + +Y ++I C + KL++ +EM GI + +
Sbjct: 523 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 582
Query: 296 -------NLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
N Q ++D G+E T V ID L K +V+
Sbjct: 583 GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVE 621
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 156/311 (50%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ +N LID K +E +F++MK PDI +Y L+ + + +
Sbjct: 315 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 374
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E + EMK++G +P+VV+Y +I+A C A++LF +M T P+ + +
Sbjct: 375 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTS 434
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L+EA + + G + TY A++ C + R+ +A + M K G
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + Y ++H IKA R E+A + K+M+ + +P + Y ++ C +++
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMT-ECNIKPDLILYGSIIWGHCSQRKLEET 553
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I +EMK+RG+ + +T+I++ K DA +FQEM D+G+ + L
Sbjct: 554 KLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDG 613
Query: 301 LRDEGMEETAV 311
L G+ E AV
Sbjct: 614 LCKAGIVELAV 624
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK+ ++ A ++ + M + +I +YT LL+G +
Sbjct: 420 MRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGR 479
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EV+R M DG P+ Y +++ + A+R ++A+++ ++M N KP ++ +
Sbjct: 480 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGS 539
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G S+++L E + K RG ++ AY + + +DA EM+ G
Sbjct: 540 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 599
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY +++ L KAG E A F RM G +P V+ Y ++ C N ++ A
Sbjct: 600 VEATIVTYCVLIDGLCKAGIVELAVDYFCRM-LSLGLQPNVAVYTSLIDGLCKNNCIESA 658
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++DEM+ RG+ P + ++ LI+ L +A M ++ I ++++L
Sbjct: 659 KKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSG 718
Query: 301 LRDEG 305
G
Sbjct: 719 FSQCG 723
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 143/319 (44%), Gaps = 2/319 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L + +E A E F +M+ R P +S LL + N + + + +M
Sbjct: 222 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 281
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P V +Y +MI+ C + + LF +M P + +LI+G G L
Sbjct: 282 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 341
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E F + K G P+ TYN ++ YC ++ A+ EM+ G+ PN TY ++
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 401
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G + A +F M R+ G P TY ++ C + A ++ ++M GV
Sbjct: 402 DAFCKEGMMQGAIKLFVDM-RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAV 311
+ Y+ L++ LC ++ +A + F+ ML GI P Q+++ L ++ E ME+
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 520
Query: 312 VLAQKIDKLRKTPLVDRGQ 330
+L Q + K L+ G
Sbjct: 521 ILKQMTECNIKPDLILYGS 539
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 150/303 (49%), Gaps = 2/303 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ L KS + + ++ F+ M P + +Y ++++ ++ +L + ++ +M++
Sbjct: 258 NFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMRE 317
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G PDVV+Y +I+ + +E LF EM+ C P + LIN +++
Sbjct: 318 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 377
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A ++F + K G +P TY+ ++ A+C + A ++ +MR+ G+ PN TY ++
Sbjct: 378 AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLID 437
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
KAG EA+ + M + G + + TY ++ C ++ A ++ M G+
Sbjct: 438 ANCKAGNLTEAWKLLNDM-LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 496
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAVV 312
P +Y+ L++ ++++DA K ++M + I+P L+ ++ +EET ++
Sbjct: 497 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 556
Query: 313 LAQ 315
L +
Sbjct: 557 LEE 559
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 152/320 (47%), Gaps = 1/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K + + L+D LCK+ + A+EVF M K P+ + YT L+ G+ + +
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 514
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ ++M + +PD++ YG +I HCS ++ +E + EM++ +P I T
Sbjct: 515 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 574
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + S+AL FF + + G E TY ++ C + + A M G
Sbjct: 575 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLG 634
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++ L K E A +F M + G P ++ + ++ + + A
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCR-GMTPDITAFTALIDGNLKHGNLQEA 693
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + +H+Y++L++ +L A K+F EM++ GI P L L +
Sbjct: 694 LVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLRE 753
Query: 301 LRDEGMEETAVVLAQKIDKL 320
G + A+ L +++++
Sbjct: 754 YYKRGQLDEAIELKNEMERM 773
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 115/253 (45%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + +K +L + +I C R +E + + ++MK R + T +++ + +
Sbjct: 525 MTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGK 584
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++EM+D G E +V+Y ++I+ C A + AV+ F M + +P+ ++ +
Sbjct: 585 SSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTS 644
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + A + F + + RG P+ + A++ + +A ++ M +
Sbjct: 645 LIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELA 704
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + Y ++ + G +A F M K G P ++R + Q+D A
Sbjct: 705 IEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEK-GILPEEVLCICLLREYYKRGQLDEA 763
Query: 241 MRIWDEMKARGVL 253
+ + +EM+ G++
Sbjct: 764 IELKNEMERMGLI 776
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ + + LID LCK+ +E A+++FD+M+ R PDI ++T L++G + N
Sbjct: 630 MLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 689
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + M + E D+ Y +++ +A + F EM P +
Sbjct: 690 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCIC 749
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
L+ +L EA++ + ++ G E+ T
Sbjct: 750 LLREYYKRGQLDEAIELKNEMERMGLITESAT 781
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 160/312 (51%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LC A V D+M +RR PD+ +YTILLE ++ ++ EM+
Sbjct: 161 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 220
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PD+V+Y +++N C R D+A+E + + + C+P+ + ++ GL + +R
Sbjct: 221 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 280
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + G+ ++G P T+N ++ C + A +++++ K G PN+ +Y+ +L
Sbjct: 281 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 340
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H K + ++A + M + G P + +Y ++ C + +VD+A+ + ++K +G
Sbjct: 341 HAFCKQKKMDKAMAFLDLMVSR-GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGC 399
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
PV+ Y+T+I+ L K +A + EM+ G++P +S + L E E A+
Sbjct: 400 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIR 459
Query: 313 LAQKIDKLRKTP 324
K+ + P
Sbjct: 460 AFGKVQDMGIRP 471
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 10/308 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
+N ++ C + ++ A+ + +M +PD +Y L+ G G+ N L+ V
Sbjct: 129 YNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALA---VLD 182
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM PDVV+Y I++ A C Y +A++L EM C P + ++NG+ E
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R+ +A++F G EP +YN V+ C + R DA +M EM + G PN T++
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ L + G E A V +++ K G P +Y ++ FC ++D AM D M +
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIP-KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
RG P + Y+TL+ +LC ++D A + ++ D G P ++ + L G +
Sbjct: 362 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 421
Query: 310 AVVLAQKI 317
A+ L ++
Sbjct: 422 ALELLNEM 429
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 163/348 (46%), Gaps = 39/348 (11%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D+ ++ +PD + L++ CK ++A ++ D+M+ + PDI +Y +++ G Q
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS--- 114
+ + E + + G EP+ VSY I++ C+A+R+++A EL EM C P+
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300
Query: 115 ------------------------PHIFCT--------LINGLGSEKRLSEALQFFGQSK 142
P CT L++ +K++ +A+ F
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
RG P+ +YN ++ A C S ++ A ++ +++ G P +Y+ V+ L KAG+T+
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 420
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA + M K G +P + TY + C +++ A+R + +++ G+ P +Y+ +
Sbjct: 421 EALELLNEMVSK-GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
I LC + A F M+ G P ++ L + L EG+ + A
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 527
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI LC+ VE A EV +++ K P+ SY LL + +QK
Sbjct: 289 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 348
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G PD+VSY ++ A C + D AVEL +++ C P + T
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 408
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + EAL+ + +G +P+ TY+ + C RI DA R +++ G
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 468
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PNT Y+ ++ L K T A +F M G P STY I++ Y + A
Sbjct: 469 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN-GCMPNESTYTILIEGLAYEGLIKEA 527
Query: 241 MRIWDEMKARGVL 253
+ DE+ +RGV+
Sbjct: 528 RDLLDELCSRGVV 540
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 39/275 (14%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL-- 135
PDV++Y M+ +C A + D A L EM +P + + TLI GL R + AL
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 136 ---------------------------------QFFGQSKKRGFEPEAPTYNAVVGAYCW 162
+ + + +G P+ TYN VV C
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
R++DA + + G PNT +Y+IVL L A R E+A + M +K G P V
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK-GCPPNVV 299
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
T+ +++ C V+ A+ + +++ G P Y+ L+++ C + K+D A + M
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359
Query: 283 LDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ G P ++ L AL G + AV L ++
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 152/314 (48%), Gaps = 1/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LCK + +E+A KM + F PD+ +YT ++ + L + EM
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ P+VV+Y ++I+ C R DEAV L +M C P+ + +LI+GL +R S
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERAS 132
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + G P+ TY ++ +C S + +DA R+ +++ G P+ TY ++
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR +EA +F RM + P TY ++ FC ++D AM + + M G
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+TL+N C +LDDA +M G+ P F++L L E AV
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312
Query: 313 LAQKIDKLRKTPLV 326
+ ++ + +P V
Sbjct: 313 ILGEMRRKSCSPTV 326
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 146/279 (52%), Gaps = 3/279 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + +I LC + A++ ++M R P++ +YT+L++G + +
Sbjct: 41 GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M+ P V+Y +I+ C A+R EA +L EM + C P + TLI G
Sbjct: 101 VALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 159
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGP 183
K+ +AL+ F Q RGF P+ TY+ ++ C R+ +A + M K G P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
NT TY+ ++ + G+ +EA ++ +RM+ + G+ P V TY ++ FC A++D A +
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMA-ETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++M +G+ P + +++L++ LC E++L DA EM
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 151/306 (49%), Gaps = 5/306 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + ++ ++ LID LCK ++ A ++F +M K P+ +Y L+ G+ + +
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ M + G PDVV+Y ++N C R D+A +L +M P F +L++
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL E RLS+A+ G+ +++ P TYN ++ YC + ++ +A + M E C P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC--PP 357
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N +++I++ L K R+ EA + + +R+ P V Y V+ C +VD A R+
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEE-ARRRRCNPDVVMYTTVIDGLCREKKVDEACRV 416
Query: 244 WDEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ +M + G LP YSTLI LC+ LD A Y ++ I L ++A R
Sbjct: 417 YRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANR 476
Query: 303 DEGMEE 308
DE E
Sbjct: 477 DEDARE 482
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Query: 106 MEATN-CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
M ATN C + +LI GL KRL +AL F G+ +GF P+ TY AV+ A C
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
R+++A + ++EM + PN TY +++ L K GR +EA ++ +M +K PT TY
Sbjct: 61 RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTY 118
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ C + A + +EM G +P + Y+TLI C K DDA + F++++
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
G RP +S L L EG + A+ L ++ K
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
D V+Y +I C KR ++A+ +M + P + + +I+ L E RL EA +F
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+ R P TY ++ C R+++A ++ +MRK + P TY+ ++ L KA
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
R EAY + + M G P + TY ++ FC + + D A+R+++++ ARG P +
Sbjct: 129 ERASEAYDLLEEMVYS-GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL-FSNLKQALRDEGMEETAVVLAQKI 317
YS LI+ LC E +L +A F M+ G P + +++L G + A+ L +++
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247
Query: 318 DKLRKTP 324
+ +P
Sbjct: 248 AETGSSP 254
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 124/252 (49%), Gaps = 8/252 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + L++ CK ++ A ++ ++M ++ PD+ ++T L++G ++
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM+ P V +Y +++ +C A + +EA + +E +C P+ F
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNI 364
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKC 179
+I GL R SEA++ ++++R P+ Y V+ C ++++A R+ +M +
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN+ TY ++ L AG + A ++ G P + TY +++ F + +
Sbjct: 425 GCLPNSITYSTLITGLCNAGMLDRARGYIEK-----GCVPNIGTYNLLIDAFRKANRDED 479
Query: 240 AMRIWDEMKARG 251
A + D+M RG
Sbjct: 480 ARELLDDMVQRG 491
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 34/214 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ F L+D LC+ + A + +M+++ P + +Y +L+G+ +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E D P+VVS+ IMI C R EA+EL E C P ++ T
Sbjct: 342 LEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399
Query: 121 LINGLGSEKRLSEALQFFGQ---------------------------SKKRGF-----EP 148
+I+GL EK++ EA + + + + RG+ P
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVP 459
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
TYN ++ A+ + R DA ++D+M + G G
Sbjct: 460 NIGTYNLLIDAFRKANRDEDARELLDDMVQRGFG 493
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 152/314 (48%), Gaps = 1/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LCK + +E+A KM + F PD+ +YT ++ + L + EM
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ P+VV+Y ++I+ C R DEAV L +M C P+ + +LI+GL +R S
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERAS 132
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + G P+ TY ++ +C S + +DA R+ +++ G P+ TY ++
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR +EA +F RM + P TY ++ FC ++D AM + + M G
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+TL+N C +LDDA +M G+ P F++L L E AV
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312
Query: 313 LAQKIDKLRKTPLV 326
+ ++ + +P V
Sbjct: 313 ILGEMRRKSCSPTV 326
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 159/316 (50%), Gaps = 4/316 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + +I LC + A++ ++M R P++ +YT+L++G + +
Sbjct: 41 GFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEA 100
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M+ P V+Y +I+ C A+R EA +L EM + C P + TLI G
Sbjct: 101 VALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITG 159
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGP 183
K+ +AL+ F Q RGF P+ TY+ ++ C R+ +A + M K G P
Sbjct: 160 FCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP 219
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
NT TY+ ++ + G+ +EA ++ +RM+ + G+ P V TY ++ FC A++D A +
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMA-ETGSSPDVVTYTTLMNGFCKLARLDDAYDL 278
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN-LKQALR 302
++M +G+ P + +++L++ LC E++L DA EM P ++ L R
Sbjct: 279 LNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCR 338
Query: 303 DEGMEETAVVLAQKID 318
+EE + +++D
Sbjct: 339 ANQLEEARKFMLEEMD 354
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 151/306 (49%), Gaps = 5/306 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + ++ ++ LID LCK ++ A ++F +M K P+ +Y L+ G+ + +
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ M + G PDVV+Y ++N C R D+A +L +M P F +L++
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL E RLS+A+ G+ +++ P TYN ++ YC + ++ +A + M E C P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC--PP 357
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N +++I++ L K R+ EA + + +R+ P V Y V+ C +VD A R+
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEE-ARRRRCNPDVVMYTTVIDGLCREKKVDEACRV 416
Query: 244 WDEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ +M + G LP YSTL+ LC+ LD A Y ++ I L ++A R
Sbjct: 417 YRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANR 476
Query: 303 DEGMEE 308
DE E
Sbjct: 477 DEDARE 482
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Query: 106 MEATN-CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
M ATN C + +LI GL KRL +AL F G+ +GF P+ TY AV+ A C
Sbjct: 1 MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
R+++A + ++EM + PN TY +++ L K GR +EA ++ +M +K PT TY
Sbjct: 61 RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTY 118
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ C + A + +EM G +P + Y+TLI C K DDA + F++++
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
G RP +S L L EG + A+ L ++ K
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
D V+Y +I C KR ++A+ +M + P + + +I+ L E RL EA +F
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+ R P TY ++ C R+++A ++ +MRK + P TY+ ++ L KA
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKA 128
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
R EAY + + M G P + TY ++ FC + + D A+R+++++ ARG P +
Sbjct: 129 ERASEAYDLLEEMVYS-GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL-FSNLKQALRDEGMEETAVVLAQKI 317
YS LI+ LC E +L +A F M+ G P + +++L G + A+ L +++
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247
Query: 318 DKLRKTP 324
+ +P
Sbjct: 248 AETGSSP 254
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 124/252 (49%), Gaps = 8/252 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + L++ CK ++ A ++ ++M ++ PD+ ++T L++G ++
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM+ P V +Y +++ +C A + +EA + +E +C P+ F
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNI 364
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKC 179
+I GL R SEA++ ++++R P+ Y V+ C ++++A R+ +M +
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP 424
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN+ TY ++ L AG + A ++ G P + TY +++ F + +
Sbjct: 425 GCLPNSITYSTLVTGLCNAGMLDRARGYIEK-----GCVPNIGTYNLLIDAFRKANRDED 479
Query: 240 AMRIWDEMKARG 251
A + D+M RG
Sbjct: 480 ARELLDDMVQRG 491
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 34/214 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ F L+D LC+ + A + +M+++ P + +Y +L+G+ +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E D P+VVS+ IMI C R EA+EL E C P ++ T
Sbjct: 342 LEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399
Query: 121 LINGLGSEKRLSEALQFFGQ---------------------------SKKRGF-----EP 148
+I+GL EK++ EA + + + + RG+ P
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVP 459
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
TYN ++ A+ + R DA ++D+M + G G
Sbjct: 460 NIGTYNLLIDAFRKANRDEDARELLDDMVQRGFG 493
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 151/311 (48%), Gaps = 2/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + FN + +LCK + A+E+F M + PD+ SY+ILL G+ +
Sbjct: 360 MTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGR 419
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
MN ++ M D G + + I+I+AH DEA+ +F EM+ +P + T
Sbjct: 420 FADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYST 479
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ RL++A++ F Q G EP Y++++ +C + A ++ EM G
Sbjct: 480 LISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKG 539
Query: 181 IG-PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I PN + ++H L GR +A+ VF + G PT+ T+ ++ +C +++
Sbjct: 540 IPRPNIVFFSSIIHSLCNEGRVMDAHDVFN-LVIHIGDRPTIVTFNSLIDGYCLVGKMEK 598
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + D M + G+ P + Y+TL++ C K+DD F+EML ++P +S +
Sbjct: 599 AFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLD 658
Query: 300 ALRDEGMEETA 310
L G A
Sbjct: 659 GLFHAGRTSAA 669
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 143/299 (47%), Gaps = 3/299 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR--RFDPDIKSYTILLEGWGQQ 58
M G +N +I +LC + A ++ +M K R PD+ S+ ++ G+ +Q
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 277
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ + EM G EPDVV+Y +++A C A+ D+A + R+M +P +
Sbjct: 278 GEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTY 337
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+G E+ + F + +G P T+N+ + + C R DA + M
Sbjct: 338 TAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTT 397
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G P+ +Y I+LH GR + ++F M+ K G + I++ +D
Sbjct: 398 KGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK-GIVANCHCFNILISAHAKRGMMD 456
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
AM ++ EM+ +GV P + YSTLI++ C +L DA + F +M+ IG+ P ++ +L
Sbjct: 457 EAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSL 515
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 150/321 (46%), Gaps = 2/321 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ ++ LI C+ + A E F +M +P+ Y L+ G+ +L+
Sbjct: 469 GVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKA 528
Query: 65 NEVYREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E+ EM G P++V + +I++ C+ R +A ++F + +P+ F +LI+
Sbjct: 529 KELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLID 588
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G ++ +A G EP+ TYN +V YC S +I+D + EM + P
Sbjct: 589 GYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKP 648
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
T TY IVL L AGRT A +F M GT + TY+I+++ C N D A+ +
Sbjct: 649 TTVTYSIVLDGLFHAGRTSAAKKMFHEMI-DSGTAVDIDTYKILLKGLCRNDLTDEAITL 707
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ ++ A + + +T+IN+L + ++A F + G+ P + + L
Sbjct: 708 FHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLK 767
Query: 304 EGMEETAVVLAQKIDKLRKTP 324
EG E A + ++K P
Sbjct: 768 EGSVEEADTMFSSMEKSGCAP 788
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 122/270 (45%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ +I +LC V A +VF+ + P I ++ L++G+ + V M
Sbjct: 548 FSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMV 607
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPDVV+Y +++ +C + + D+ + LFREM KP+ + +++GL R S
Sbjct: 608 SVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTS 667
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G + TY ++ C + ++A + ++ + + V+
Sbjct: 668 AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVI 727
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K R EEA +F +S G P VSTY +++ V+ A ++ M+ G
Sbjct: 728 NALYKVRRREEANDLFAAISTS-GLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGC 786
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P + + +I L + + A Y ++
Sbjct: 787 APSSRLLNDIIRMLLQKGDIVKAGYYMSKV 816
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 5/233 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ +N L+ CKS ++ +F +M ++ P +Y+I+L+G
Sbjct: 606 MVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGR 665
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM D G D+ +Y I++ C DEA+ LF ++ A +CK I T
Sbjct: 666 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 725
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN L +R EA F G P TY ++ + +A M M K G
Sbjct: 726 VINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSG 785
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV--STYEIVVRMF 231
P++R + ++ L++ G +A MS+ GT ++ ST +++ +F
Sbjct: 786 CAPSSRLLNDIIRMLLQKGDIVKAG---YYMSKVDGTIISLEASTTSLLMSLF 835
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 1/228 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + + FN LID C +E+A V D M +PD+ +Y L+ G+ + +
Sbjct: 574 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDD 633
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++REM +P V+Y I+++ A R A ++F EM + + L+
Sbjct: 634 GLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLK 693
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL EA+ F + + + N V+ A R +A + + G+ P
Sbjct: 694 GLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVP 753
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
N TY +++H+L+K G EEA ++F M K G P+ ++RM
Sbjct: 754 NVSTYGVMIHNLLKEGSVEEADTMFSSM-EKSGCAPSSRLLNDIIRML 800
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 5/250 (2%)
Query: 65 NEVYREMKDDGFEP-DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
N + RE P V +YGI+++ C A+R D F + + T +
Sbjct: 140 NRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLK 199
Query: 124 GLGSEKRLSEALQ-FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-- 180
L KR EA+ + G P A +YN V+ + C R +A M+ M K G
Sbjct: 200 CLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR 259
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +++ V+H K G +A ++ M +K G EP V TY +V C +D A
Sbjct: 260 CSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQK-GVEPDVVTYNSIVDALCKARAMDKA 318
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M +GV P Y+ +I+ ++ K F++M G+ P F++ +
Sbjct: 319 ELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSS 378
Query: 301 LRDEGMEETA 310
L G + A
Sbjct: 379 LCKHGRSKDA 388
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 157/346 (45%), Gaps = 38/346 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + +N LID KS + +A E+ +MK R+ P +Y++L+ G +L
Sbjct: 411 GIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
NEV +M +G +P+V YG +I A+ RY+ A+EL + M A P + LI G
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L K++ EA ++G +P A TY A + Y S I A R +M GI PN
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 185 T-----------------------------------RTYDIVLHHLIKAGRTEEAYSVFK 209
R Y ++H L K G+T+EA VF
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN--SLC 267
+ K G P V Y ++ FC ++ A +++DEM G+ P + +Y+TLIN C
Sbjct: 651 KF-LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYC 709
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
L +A K F EM+ GI P G ++ L EG E A+ L
Sbjct: 710 KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSL 755
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + LID K ++E A + D+M R ++ +Y ++ G +
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G EPD +Y ++I+ + + +A EL EM+A PSP +
Sbjct: 397 MAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L +A + Q + G +P Y ++ AY R A ++ M G
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ Y+ ++ L +A + EEA + M K G +P TY + ++ + ++ +A
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEK-GIKPNAHTYGAFINLYSKSGEIQVA 575
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R + +M + G++P +Y+ LI C +A F+ ML+ G+ P + +S + +
Sbjct: 576 ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A+ + K K P
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVP 659
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 143/302 (47%), Gaps = 2/302 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ L K+ + +V+ M + + PD+ +YT +++ + +++ V EM+
Sbjct: 211 NNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK 270
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+ +P++ +Y I C DEA+E+ + M P H + L++G +KR E
Sbjct: 271 EC-KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A F G P TY A++ + I +A R+ DEM G+ N TY+ ++
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
+ KAG +A S+F M G EP TY +++ + + + A + EMKAR +
Sbjct: 390 GIAKAGEMAKAMSLFNEM-LMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P YS LI+ LCH L A + +M+ G++P ++ L +A E E A+ L
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508
Query: 314 AQ 315
+
Sbjct: 509 LK 510
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 140/301 (46%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + L+D CK + + A+ +F+ M +P+ +YT L++G+ ++ N+
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM G + +VV+Y MI A +A+ LF EM +P + LI+G
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDG 425
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+++A + + K R P TY+ ++ C S + A ++D+M + G+ PN
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ ++ R E A + K M G P + Y ++ C +V+ A +
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIAN-GVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M +G+ P H Y IN ++ A +YF++ML GI P +++ L + D
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDV 604
Query: 305 G 305
G
Sbjct: 605 G 605
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 140/288 (48%), Gaps = 1/288 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K L +N I LC++ V+ A EV M ++ PD +YT+L++G+ +QK
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M G P+ +Y +I+ +EA+ + EM K + + +I G+
Sbjct: 333 IFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+++A+ F + G EP+ TYN ++ Y S + A ++ EM+ + P+
Sbjct: 393 KAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY +++ L + ++A V +M R G +P V Y +++ + ++ +MA+ +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRN-GVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
M A GVLP + Y+ LI LC K+++A +M + GI+P +
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + +N +I + K+ + +A +F++M +PD +Y +L++G+ + ++
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKA 435
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ EMK P +Y ++I+ C + +A E+ +M KP+ ++ TLI
Sbjct: 436 CELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKA 495
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E R A++ G P+ YN ++ C + ++ +A ++ +M + GI PN
Sbjct: 496 YVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPN 555
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ K+G + A FK M G P Y I+++ C A+ +
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDM-LSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M +G++P + YS +I+SL K +A F + L G+ P L+++L E
Sbjct: 615 KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKE 674
Query: 305 GMEETA 310
G E A
Sbjct: 675 GDIEKA 680
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 4/317 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ ++ +I +L K+ + A VF K K PD+ Y L+ G+ ++ ++
Sbjct: 621 GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKA 680
Query: 65 NEVYREMKDDGFEPDVVSYGIMIN--AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+++Y EM +G P++V Y +IN +C + EA +LF EM + P +I+C LI
Sbjct: 681 SQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 740
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G G E L +AL F +++++ +N+++ ++C ++ +A + D+M +
Sbjct: 741 DGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLT 799
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY I++ KA EEA +F M + P TY ++ + +
Sbjct: 800 PNIVTYTILIDAYGKAEMMEEAEQLFLDMETR-NIIPNTLTYTSLLLSYNQIGNRFKMIS 858
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ +M+ARG+ Y + ++ C E K +A K + L GI+ +F L L
Sbjct: 859 LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 918
Query: 303 DEGMEETAVVLAQKIDK 319
E T + L ++ K
Sbjct: 919 KEKQISTVLELLSEMGK 935
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 8/306 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N LI LC+++ VE A+ + M ++ P+ +Y + + + +
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++M G P+ V Y I+I HC EA+ F+ M P + +I+ L
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ EA+ F + K G P+ YN+++ +C I A ++ DEM GI PN
Sbjct: 638 KNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697
Query: 187 TYDIVL--HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ ++ + K+G EA+ +F M K G P Y I++ ++ A+ ++
Sbjct: 698 VYNTLINDYGYCKSGNLTEAFKLFDEMISK-GISPDGYIYCILIDGCGKEGNLEKALSLF 756
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RD 303
E + + V + +++LI+S C K+ +A + F +M+D + P ++ L A +
Sbjct: 757 HEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 815
Query: 304 EGMEET 309
E MEE
Sbjct: 816 EMMEEA 821
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 143/299 (47%), Gaps = 4/299 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K + I+ KS ++ A+ F M P+ YTIL++G N
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M + G PD+ +Y +I++ + EA+ +F + T P ++ +
Sbjct: 607 TVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG--AYCWSMRINDAYRMMDEMRK 178
LI+G E + +A Q + + G P YN ++ YC S + +A+++ DEM
Sbjct: 667 LISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMIS 726
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
GI P+ Y I++ K G E+A S+F +K + ++S + ++ FC + +V
Sbjct: 727 KGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQK--SVGSLSAFNSLIDSFCKHGKVI 784
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A ++D+M + + P + Y+ LI++ + +++A + F +M I P +++L
Sbjct: 785 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 843
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 126/283 (44%), Gaps = 3/283 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K + + LI + E A E+ M PD+ Y L+ G + K
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G +P+ +YG IN + + A F++M ++ P+ I+
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G EAL F ++G P+ Y+A++ + + + +A + + K G
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR--MFCYNAQVD 238
+ P+ Y+ ++ K G E+A ++ M G P + Y ++ +C + +
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN-GINPNIVVYNTLINDYGYCKSGNLT 715
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
A +++DEM ++G+ P ++Y LI+ E L+ A F E
Sbjct: 716 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE 758
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L FN LID+ CK V A+E+FD M ++ P+I +YTIL++ +G+ + + +++
Sbjct: 767 LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 826
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M+ P+ ++Y ++ ++ + + LF++MEA + + + E
Sbjct: 827 DMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 886
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ EAL+ +S G + E ++A++ C +I+ ++ EM K + +++T +
Sbjct: 887 KSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 946
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
+L K+G +EA V M R G PT
Sbjct: 947 TLLLGFYKSGNEDEASKVLGVMQR-LGWVPT 976
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 127/289 (43%), Gaps = 43/289 (14%)
Query: 5 GLKQELPDFNRLID--TLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL- 61
G+ + +N LI+ CKS ++ A ++FD+M + PD Y IL++G G++ NL
Sbjct: 691 GINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 750
Query: 62 ---------------------------------LSMNEVYREMKDDGFEPDVVSYGIMIN 88
+ E++ +M D P++V+Y I+I+
Sbjct: 751 KALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILID 810
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI---NGLGSEKRLSEALQFFGQSKKRG 145
A+ A+ +EA +LF +ME N P+ + +L+ N +G+ ++ + F + RG
Sbjct: 811 AYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM---ISLFKDMEARG 867
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+A Y + AYC + +A +++++ GI +D ++ HL K +
Sbjct: 868 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 927
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+ M ++ + + T ++ F + D A ++ M+ G +P
Sbjct: 928 ELLSEMGKEELSLSS-KTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 168/341 (49%), Gaps = 17/341 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N +I L + +E A+ +F++MK + PDI +Y L++G+G+ L
Sbjct: 246 GLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGA 305
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ EMKD G EPDV++Y +IN C +R +A E M+ +P+ + TLI+
Sbjct: 306 VSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDA 365
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L EA +FF + G +P TY +++ A C +N+A+++ EM++ G+ N
Sbjct: 366 FCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLN 425
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L L + GR EA +F + K G Y + + ++ AM I
Sbjct: 426 IVTYTALLDGLCEDGRMREAEELFGAL-LKAGWTLNQQIYTSLFHGYIKAKMMEKAMDIL 484
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--------- 295
+EM + + P + +Y T I LC +++++D+ +EM+D G+ +++
Sbjct: 485 EEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKV 544
Query: 296 -------NLKQALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
NL Q ++D G++ T V ID L K LV +
Sbjct: 545 GKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQA 585
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 147/297 (49%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + ++ LID CK+ + A + F M + P+ +YT L++ + +
Sbjct: 347 MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGD 406
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM+ G ++V+Y +++ C R EA ELF + + I+ +
Sbjct: 407 LNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTS 466
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L +G K + +A+ + K+ +P+ Y + C I D+ ++ EM CG
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N+ Y ++ K G+T EA ++ + M + G + TV TY +++ C V A
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEM-QDLGIKITVVTYGVLIDGLCKIGLVQQA 585
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+R +D M G+ P + +Y+ LI+ LC D L++A F EMLD GI P ++++L
Sbjct: 586 VRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSL 642
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L K++ +E+A ++ ++M K+ PD+ Y + G +Q + V REM
Sbjct: 464 YTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMM 523
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G + Y +I+A+ + EAV L +EM+ K + + LI+GL +
Sbjct: 524 DCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQ 583
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+++F + G +P Y A++ C + + +A + +EM GI P+ Y ++
Sbjct: 584 QAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLI 643
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+K G EA S+ RM + G E + Y ++ F QV +A + DEM +G+
Sbjct: 644 DGNMKHGNPGEALSLRNRMV-EIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGI 702
Query: 253 LP 254
+P
Sbjct: 703 IP 704
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 125/289 (43%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + L+D LC+ + A+E+F + K + + + YT L G+ + K
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM +PD++ YG I C ++++ + REM + +I+ T
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ + +EA+ + + G + TY ++ C + A R D M + G
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++ L K EEA ++F M K G P Y ++ + A
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDK-GISPDKLVYTSLIDGNMKHGNPGEA 655
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + + M G+ + Y++LI ++ A EML GI P
Sbjct: 656 LSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIP 704
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 1/223 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + + N +EA + F +M P L++ L + AL F
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F G P TYN V+G + A + +EM+ G+ P+ TY+ ++ K
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G A SVF+ M + G EP V TY ++ FC ++ A MK RG+ P +
Sbjct: 299 VGMLTGAVSVFEEM-KDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
YSTLI++ C L +A K+F +M+ +G++P +++L A
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDA 400
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + + LID LCK V++A FD M + P+I YT L++G +
Sbjct: 557 MQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDC 616
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM D G PD + Y +I+ + EA+ L M + + +
Sbjct: 617 LEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTS 676
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G ++ A + ++G P+ ++ Y IN+A + D+M + G
Sbjct: 677 LIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736
Query: 181 IGPNT 185
+ T
Sbjct: 737 LISGT 741
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + LID K A + +M+ + +Y +L++G + +
Sbjct: 526 GLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQA 585
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M +G +P+++ Y +I+ C +EA LF EM P ++ +LI+G
Sbjct: 586 VRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDG 645
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
EAL + + G E + Y +++ + ++ A ++DEM + GI P+
Sbjct: 646 NMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPD 705
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+L + G EA ++ M+R+ T+
Sbjct: 706 QVLCICLLRKYYELGDINEALALHDDMARRGLISGTI 742
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 149/291 (51%), Gaps = 4/291 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + LID CK + A + F +M R PD+ +YT ++ G+ Q +++ +
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ EM G EPD V++ +IN +C A +A + M C P+ + TLI+GL
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
E L A + + K G +P TYN++V C S I +A +++ E G+ +T
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ K+G ++A + K M K G +PT+ T+ +++ FC + ++ ++ +
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
M A+G+ P +++L+ C + L A +++M G+ P G+ + NL
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 3/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + +I LC+ + A+E F +M ++ PD YT L++G+ ++ +
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ + EM PDV++Y +I+ C EA +LF EM +P F
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING + +A + + G P TY ++ C ++ A ++ EM K G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +++ L K+G EEA + G TY ++ +C + ++D A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--K 298
I EM +G+ P + ++ L+N C L+D K ML GI P F++L +
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 299 QALRDEGMEETAV 311
+R+ TA+
Sbjct: 606 YCIRNNLKAATAI 618
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 153/323 (47%), Gaps = 4/323 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + F LI+ CK+ H++ A V + M + P++ +YT L++G ++ +L S
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
NE+ EM G +P++ +Y ++N C + +EAV+L E EA + TL++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A + + +G +P T+N ++ +C + D ++++ M GI PN
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ + A +++K M + G P TYE +V+ C + A ++
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EMK +G + YS LI K +A + F +M G+ ++F + +
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT-KYK 713
Query: 305 GMEETAVVLAQKIDKLRKTPLVD 327
G +V ID++ + LVD
Sbjct: 714 GKRPDTIV--DPIDEIIENYLVD 734
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 149/316 (47%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I +C+ ++ A + M+ + + PD+ SY+ ++ G+ + L +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ MK G +P+ YG +I C + EA E F EM P ++ TLI+G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ A +FF + R P+ TY A++ +C + +A ++ EM G+ P+
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ T+ +++ KAG ++A+ V M + G P V TY ++ C +D A +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELL 479
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM G+ P + Y++++N LC +++A K E G+ ++ L A
Sbjct: 480 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 539
Query: 305 G-MEETAVVLAQKIDK 319
G M++ +L + + K
Sbjct: 540 GEMDKAQEILKEMLGK 555
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 125/252 (49%), Gaps = 1/252 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + LID LCK ++ A E+ +M K P+I +Y ++ G + N
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ E + G D V+Y +++A+C + D+A E+ +EM +P+ F
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG L + + +G P A T+N++V YC + A + +M G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+GP+ +TY+ ++ KA +EA+ +F+ M K G +VSTY ++++ F + A
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 241 MRIWDEMKARGV 252
++D+M+ G+
Sbjct: 686 REVFDQMRREGL 697
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+RE + G +V SY I+I+ C R EA L ME P + T++NG
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
L + + K++G +P + Y +++G C ++ +A EM + GI P+T
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y ++ K G A F M + T P V TY ++ FC + A +++ E
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDIT-PDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M +G+ P ++ LIN C + DA + M+ G P ++ L L EG
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 307 EETAVVLAQKIDKLRKTP 324
++A L ++ K+ P
Sbjct: 472 LDSANELLHEMWKIGLQP 489
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 149/275 (54%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L+D CK V+ A+ V M K+ PD+ +Y L++G+ K + ++ M
Sbjct: 269 FSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMA 328
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +V SY IMIN C K+ DEA+ LF+EM N P + +LI+GL ++S
Sbjct: 329 QGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKIS 388
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL+ + RG + TYN+++ A C + +++ A ++ +M+ GI P+ TY I++
Sbjct: 389 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILI 448
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR ++A ++F+ + K G TV TY ++++ FC N D A+ + +M+ G
Sbjct: 449 DGLCKGGRLKDAQNIFEDLLVK-GYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGC 507
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+P Y +I SL +D+ D A K +EM+ G+
Sbjct: 508 IPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 149/293 (50%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI+ LCK A ++ ++ + P++ Y +++ + K + ++Y EM
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDVV+Y +I+ C + ++A+ LF +M + P + F L++G E R+
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA K+G +P+ TY +++ YC ++N A + + M + G+ N ++Y+I++
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K + +EA ++FK M K P V TY ++ C + ++ A+++ DEM RGV
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCK-NIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV 402
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y++++++LC ++D A +M D GI+P ++ L L G
Sbjct: 403 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGG 455
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 161/330 (48%), Gaps = 8/330 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L FN LI+ + H + VF + K+ ++P+ + T L++G + +
Sbjct: 86 GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ GF + V YG +IN C + A++L R ++ +P+ ++ T+I+
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 205
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ K ++EA + + +G P+ TY+A++ +C ++NDA + ++M I P+
Sbjct: 206 MCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPD 265
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ I++ K GR +EA +V M K G +P V TY ++ +C QV+ A I+
Sbjct: 266 VYTFSILVDGFCKEGRVKEAKNVLAMM-MKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIF 324
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M GV + Y+ +IN C K+D+A F+EM I P +++L L
Sbjct: 325 NTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKS 384
Query: 305 GMEETAVVLAQKI-------DKLRKTPLVD 327
G A+ L ++ DK+ ++D
Sbjct: 385 GKISYALKLVDEMHDRGVPHDKITYNSILD 414
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 2/238 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + +G ++ + Y A+ L REME F LIN +
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F K+G+EP A T ++ C +I+ A D++ G N Y +++ L K
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G+T A + +R+ K +P V Y ++ C V+ A ++ EM ++G+ P +
Sbjct: 174 VGQTSAALQLLRRVDGKL-VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 232
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLA 314
YS LI+ C KL+DA F +M+ I P FS L EG ++E VLA
Sbjct: 233 TYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLA 290
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N +I+ CK + V+ A +F +M + PD+ +Y L++G +
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM D G D ++Y +++A C + D+A+ L +M+ +P + +
Sbjct: 387 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTI 446
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL RL +A F +G+ TY ++ +C + + A ++ +M G
Sbjct: 447 LIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNG 506
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
PN +TY+I++ L + + A + + M
Sbjct: 507 CIPNAKTYEIIILSLFEKDENDMAEKLLREM 537
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 165/317 (52%), Gaps = 5/317 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + FN LI C+++ ++ AQ++FDKM R F D SY L+EG+ +
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++RE++ +PD+ ++ ++ C A+R +E + + ++M+ +P+ +
Sbjct: 215 VDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ E++ EA + + G P A T AVV AYC R++ A R+ + M+ G
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+ ++ G+ +A ++ +M R+ G EP V TY +++R C + ++ A
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQM-RECGVEPDVVTYNLLIRGQCIDGHIESA 389
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ M+ G+ + Y+ LI++LC K+D+AC F + GIRP F+ +
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449
Query: 301 LRDEGMEETAVVLAQKI 317
L G + A +K+
Sbjct: 450 LCKGGKFDVACTFLEKM 466
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 134/274 (48%), Gaps = 1/274 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ LC +R E + KMK+ + P ++Y L++ W +++ ++ EM D+G
Sbjct: 236 LVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNG 295
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P V+ ++NA+C R AV +F M+ C+P+ + ++ G + ++ +A+
Sbjct: 296 LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAM 355
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q ++ G EP+ TYN ++ C I A+R++ M G+ + TY++++ L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDAL 415
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G+ +EA S+F + + G P T+ V+ C + D+A ++M + G P
Sbjct: 416 CKTGKVDEACSLFDGLEYR-GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPD 474
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ YS I +LC + + EML ++P
Sbjct: 475 TYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKP 508
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 139/309 (44%), Gaps = 1/309 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+++ C+ + A VF+ MK + +P++ +Y +++G+ + + +M++ G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
EPDVV+Y ++I C + A L R ME + + LI+ L ++ EA
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + RG P + T+N V+ C + + A +++M G P+T TY + +L
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K + E S M +K +P+ Y IV+ +A RIW +M + G P
Sbjct: 486 CKTKGSREGLSFIDEMLQK-DVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPD 544
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ Y+T + + C+E +L +A EM GI ++ L G + AV + +
Sbjct: 545 VVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILK 604
Query: 316 KIDKLRKTP 324
+ + P
Sbjct: 605 HMTGVASMP 613
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 129/285 (45%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N ++ C V +A + D+M++ +PD+ +Y +L+ G ++ S
Sbjct: 330 GCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESA 389
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ R M+ +G D +Y ++I+A C + DEA LF +E +P+ F T+ING
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + A F + G P+ TY+ + C + + +DEM + + P+
Sbjct: 450 LCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPS 509
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T Y IV+ L K A ++ +M G P V TY VR +C ++ A +
Sbjct: 510 TVNYTIVIDRLFKERNYGLATRIWGQMVSL-GCSPDVVTYTTSVRAYCNEGRLHEAENVV 568
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EMK G++ Y+TLI+ K D A + M + P
Sbjct: 569 MEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMP 613
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%), Gaps = 8/245 (3%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P +Y +I A C A M + +P F +LI G ++L A
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + RGF +A +Y A++ +C + R+++A + E+ + P+ T+ ++ L
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCD 242
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
A R EE + ++M ++ G P Y +V ++C + + A ++ +EM G++P
Sbjct: 243 ARRGEEGLYMLQKM-KELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV 301
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ ++N+ C E ++ A + F+ M G P ++ + Q + G A+ L +
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMAL---L 358
Query: 318 DKLRK 322
D++R+
Sbjct: 359 DQMRE 363
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 119/321 (37%), Gaps = 15/321 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ FN +I+ LCK + A +KM PD +Y+ +E + K
Sbjct: 435 GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREG 494
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM +P V+Y I+I+ + Y A ++ +M + C P + T +
Sbjct: 495 LSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRA 554
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+E RL EA + KK G +A YN ++ + + + A ++ M PN
Sbjct: 555 YCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPN 614
Query: 185 TRTYDI-------------VLHHLIKAGRTEEAYSVFK--RMSRKPGTEPTVSTYEIVVR 229
T+ I V +T E VF+ + +K + Y ++
Sbjct: 615 HFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILE 674
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
F ++D + MK + +Y++L+N C DA M+ G P
Sbjct: 675 GFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLP 734
Query: 290 PGQLFSNLKQALRDEGMEETA 310
+ L EG + A
Sbjct: 735 NLISYQYLLSGFTAEGQADRA 755
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 110/315 (34%), Gaps = 58/315 (18%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ +ID L K R+ A ++ +M PD+ +YT + + + L
Sbjct: 506 VKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAE 565
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAV------------------------- 100
V EMK G D ++Y +I+ H S + D AV
Sbjct: 566 NVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHL 625
Query: 101 --------------------------ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
ELF M+ + S + ++ G E+RL E
Sbjct: 626 LQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEV 685
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
K+ Y ++V +C DA+ ++ M G PN +Y +L
Sbjct: 686 TSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSG 745
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA---MRIWDEMKARG 251
G+ + A +F+ + K + ++I++ DM + I ++MK +
Sbjct: 746 FTAEGQADRAKEIFRGLRWKEYNTDEI-VWKIIIDGLIRQGHPDMCHDMISILEQMKCK- 803
Query: 252 VLPVMHMYSTLINSL 266
P Y+ L L
Sbjct: 804 --PSDETYAMLTEEL 816
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 56/134 (41%)
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
RT+ +L H + T +F M PT +TY ++R C A + A R
Sbjct: 94 RTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLS 153
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M G P +++LI C +LD A F +M G ++ L + + G
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETG 213
Query: 306 MEETAVVLAQKIDK 319
+ A+ L +++++
Sbjct: 214 RVDEALELFRELEQ 227
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 160/312 (51%), Gaps = 2/312 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+LI SR++ +A V + ++ R PD+ +Y L+ G+ + L + N V MK
Sbjct: 109 KLIKGFFNSRNIGKATRVMEILE-RYGKPDVFAYNALISGFIKANQLENANRVLDRMKSR 167
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
GF PDVV+Y IMI + CS + D A+E+F E+ NC+P+ + LI + + A
Sbjct: 168 GFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVA 227
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
++ + +G EP+ TYNA++ C M ++ A+ ++ + G P+ TY+I+L
Sbjct: 228 MKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRT 287
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L+ G+ E + M G +P V T+ I++ C + +V+ A+ + MK +G+ P
Sbjct: 288 LLSRGKWSEGEKLISEMI-SIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKP 346
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ Y LI C E +LD A ++ + M+ G P ++ + L G + A+ +
Sbjct: 347 DAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVF 406
Query: 315 QKIDKLRKTPLV 326
+K+D++ P V
Sbjct: 407 EKLDEVGCPPNV 418
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 162/323 (50%), Gaps = 7/323 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++++G K ++ +N LI K+ +E A V D+MK R F PD+ +Y I++ + +
Sbjct: 130 LERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGK 188
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ E+ D EP V++Y I+I A D A++L EM + +P +
Sbjct: 189 LDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNA 248
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G+ E + +A + RG +P+ TYN ++ + ++ +++ EM G
Sbjct: 249 IIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T+ I++ L + G+ EEA ++ + M K G +P Y+ ++ FC ++D+A
Sbjct: 309 CKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEK-GLKPDAYCYDPLIAGFCREGRLDLA 367
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M + G LP + Y+T++ LC K D A + F+++ ++G P ++ L A
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427
Query: 301 LRDEG-----MEETAVVLAQKID 318
L G +E +L Q ID
Sbjct: 428 LWSSGDRYRALEMILKLLNQGID 450
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 158/341 (46%), Gaps = 25/341 (7%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQ 58
GL+ + +N +I +CK V++A E+ + R PDI +Y ILL W +
Sbjct: 238 GLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEG 297
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ L+S EM G +P+VV++ I+I C + +EAV L R M+ KP + +
Sbjct: 298 EKLIS------EMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCY 351
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LI G E RL A +F G P+ YN ++ C + + + A + +++ +
Sbjct: 352 DPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDE 411
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G PN +Y+ + L +G A + ++ + G +P TY ++ C + VD
Sbjct: 412 VGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ-GIDPDEITYNSLISCLCRDGMVD 470
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A+ + +M++ P + Y+ ++ LC ++ +DA + M + G +P + L
Sbjct: 471 EAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLI 530
Query: 299 QALRDEGMEETAVVLAQKI-----------DKLRKT-PLVD 327
+ + G+ A+ LA + ++L KT PL+D
Sbjct: 531 EGIGFSGLRAEAMELANSLHGMNAISEDSFNRLNKTFPLLD 571
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 1/247 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K + + LI TLC+ VE A + MK++ PD Y L+ G+ ++
Sbjct: 304 MISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGR 363
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E M DG PD+V+Y ++ C + D+A+E+F +++ C P+ + T
Sbjct: 364 LDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNT 423
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L + L S AL+ + +G +P+ TYN+++ C +++A ++ +M+
Sbjct: 424 LFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +Y+I+L L K R +A V M+ K G +P +TY +++ ++ A
Sbjct: 484 YRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEK-GCQPNETTYILLIEGIGFSGLRAEA 542
Query: 241 MRIWDEM 247
M + + +
Sbjct: 543 MELANSL 549
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 113/221 (51%), Gaps = 4/221 (1%)
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT-LINGLGSEKRLSEALQFFGQSKKR 144
++N C A +Y+E++ M P I CT LI G + + + +A + ++
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDV-ILCTKLIKGFFNSRNIGKATRVMEILERY 133
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P+ YNA++ + + ++ +A R++D M+ G P+ TY+I++ G+ + A
Sbjct: 134 G-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLA 192
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+F+ + K EPTV TY I++ + +D+AM++ DEM ++G+ P Y+ +I
Sbjct: 193 LEIFEEL-LKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIR 251
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+C E +D A + + + G +P ++ L + L G
Sbjct: 252 GMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRG 292
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 149/291 (51%), Gaps = 4/291 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + LID CK + A + F +M R PD+ +YT ++ G+ Q +++ +
Sbjct: 791 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 850
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ EM G EPD V++ +IN +C A +A + M C P+ + TLI+GL
Sbjct: 851 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 910
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
E L A + + K G +P TYN++V C S I +A +++ E G+ +T
Sbjct: 911 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 970
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ K+G ++A + K M K G +PT+ T+ +++ FC + ++ ++ +
Sbjct: 971 TYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1029
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
M A+G+ P +++L+ C + L A +++M G+ P G+ + NL
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 1080
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 147/313 (46%), Gaps = 3/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + +I LC+ + A+E F +M ++ PD YT L++G+ ++ +
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ + EM PDV++Y +I+ C EA +LF EM +P F
Sbjct: 810 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING + +A + + G P TY ++ C ++ A ++ EM K G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +++ L K+G EEA + G TY ++ +C + ++D A
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKA 988
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--K 298
I EM +G+ P + ++ L+N C L+D K ML GI P F++L +
Sbjct: 989 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 1048
Query: 299 QALRDEGMEETAV 311
+R+ TA+
Sbjct: 1049 YCIRNNLKAATAI 1061
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 140/290 (48%), Gaps = 1/290 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + F LI+ CK+ H++ A V + M + P++ +YT L++G ++ +L S
Sbjct: 859 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 918
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
NE+ EM G +P++ +Y ++N C + +EAV+L E EA + TL++
Sbjct: 919 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 978
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A + + +G +P T+N ++ +C + D ++++ M GI PN
Sbjct: 979 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1038
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ + A +++K M + G P TYE +V+ C + A ++
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCKARNMKEAWFLF 1097
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
EMK +G + YS LI K +A + F +M G+ ++F
Sbjct: 1098 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 149/316 (47%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I +C+ ++ A + M+ + + PD+ SY+ ++ G+ + L +
Sbjct: 684 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 743
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ MK G +P+ YG +I C + EA E F EM P ++ TLI+G
Sbjct: 744 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 803
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ A +FF + R P+ TY A++ +C + +A ++ EM G+ P+
Sbjct: 804 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ T+ +++ KAG ++A+ V M + G P V TY ++ C +D A +
Sbjct: 864 SVTFTELINGYCKAGHMKDAFRVHNHMI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELL 922
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM G+ P + Y++++N LC +++A K E G+ ++ L A
Sbjct: 923 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 982
Query: 305 G-MEETAVVLAQKIDK 319
G M++ +L + + K
Sbjct: 983 GEMDKAQEILKEMLGK 998
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 125/252 (49%), Gaps = 1/252 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + LID LCK ++ A E+ +M K P+I +Y ++ G + N
Sbjct: 890 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 949
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ E + G D V+Y +++A+C + D+A E+ +EM +P+ F
Sbjct: 950 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 1009
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG L + + +G P A T+N++V YC + A + +M G
Sbjct: 1010 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+GP+ +TY+ ++ KA +EA+ +F+ M K G +VSTY ++++ F + A
Sbjct: 1070 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIKGFLKRKKFLEA 1128
Query: 241 MRIWDEMKARGV 252
++D+M+ G+
Sbjct: 1129 REVFDQMRREGL 1140
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+RE + G +V SY I+I+ C R EA L ME P + T++NG
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
L + + K++G +P + Y +++G C ++ +A EM + GI P+T
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y ++ K G A F M + T P V TY ++ FC + A +++ E
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMHSRDIT-PDVLTYTAIISGFCQIGDMVEAGKLFHE 854
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M +G+ P ++ LIN C + DA + M+ G P ++ L L EG
Sbjct: 855 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 914
Query: 307 EETAVVLAQKIDKLRKTP 324
++A L ++ K+ P
Sbjct: 915 LDSANELLHEMWKIGLQP 932
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 163/318 (51%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + FN L+ L + A +VFD+M+ R + PD++SYT L+ W +N
Sbjct: 27 MRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARN 85
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V+ EM ++G +PDVV + MI +R EAV++F M+A P+ +
Sbjct: 86 LVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTM 145
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++ A++ F + + G +P+ TY ++ Y + R++ +++EM + G
Sbjct: 146 LIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKG 205
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR-MFCYNAQVDM 239
P+ RTY+ ++ L ++A ++K+M +K G EPT+ TY ++++ F M
Sbjct: 206 CPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKK-GLEPTIHTYNMMMKSYFLGGRNYMM 264
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W+EM +G+ P ++ Y+ IN + ++ACKY +EM+ G++ P ++
Sbjct: 265 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAA 324
Query: 300 ALRDEGMEETAVVLAQKI 317
G + LAQK+
Sbjct: 325 DFSKAGKPDILYELAQKV 342
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 2/245 (0%)
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
++ I I + +A AV +F M F L+ L E EA Q F +
Sbjct: 3 AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRM 62
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+ R + P+ +Y A++ A+C + + +A R+ +EM + G+ P+ ++ ++ L++ R
Sbjct: 63 RDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRR 121
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EA +F+ M K G P V TY +++R C ++DMAMR ++EM+ G P + Y+
Sbjct: 122 PEAVKMFELMKAK-GPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTC 180
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
L+ + ++D +EM G P G+ ++ L + L + M + A + +K+ K
Sbjct: 181 LLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKG 240
Query: 322 KTPLV 326
P +
Sbjct: 241 LEPTI 245
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 76/204 (37%), Gaps = 36/204 (17%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI CK ++ A F++M+ PD+ +YT LL G+G K + + + EM
Sbjct: 143 YTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMT 202
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF-------------- 118
G PD +Y +I + D+A ++++M +P+ H +
Sbjct: 203 QKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNY 262
Query: 119 ----------------------CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
ING R EA ++ + ++G + YN
Sbjct: 263 MMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKF 322
Query: 157 VGAYCWSMRINDAYRMMDEMRKCG 180
+ + + + Y + +++ G
Sbjct: 323 AADFSKAGKPDILYELAQKVKFTG 346
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 163/318 (51%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + FN L+ L + A +VFD+M+ R + PD++SYT L+ W +N
Sbjct: 281 MRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARN 339
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V+ EM ++G +PDVV + MI +R EAV++F M+A P+ +
Sbjct: 340 LVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTM 399
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++ A++ F + + G +P+ TY ++ Y + R++ +++EM + G
Sbjct: 400 LIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKG 459
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR-MFCYNAQVDM 239
P+ RTY+ ++ L ++A ++K+M +K G EPT+ TY ++++ F M
Sbjct: 460 CPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKK-GLEPTIHTYNMMMKSYFLGGRNYMM 518
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W+EM +G+ P ++ Y+ IN + ++ACKY +EM+ G++ P ++
Sbjct: 519 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAA 578
Query: 300 ALRDEGMEETAVVLAQKI 317
G + LAQK+
Sbjct: 579 DFSKAGKPDILYELAQKV 596
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+Y ++ G+ + SM + +EM +G + ++ I I + +A AV +F M
Sbjct: 223 TYCKMVHILGKARQFQSMVALIQEMGKEG-ALCMDAFKIAIKSFAAAGEIKNAVGVFEMM 281
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
F L+ L E EA Q F + + R + P+ +Y A++ A+C + +
Sbjct: 282 RTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARNL 340
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A R+ +EM + G+ P+ ++ ++ L++ R EA +F+ M K G P V TY +
Sbjct: 341 VEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAK-GPAPNVWTYTM 399
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++R C ++DMAMR ++EM+ G P + Y+ L+ + ++D +EM G
Sbjct: 400 LIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKG 459
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
P G+ ++ L + L + M + A + +K+ K P +
Sbjct: 460 CPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTI 499
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 76/204 (37%), Gaps = 36/204 (17%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI CK ++ A F++M+ PD+ +YT LL G+G K + + + EM
Sbjct: 397 YTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMT 456
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF-------------- 118
G PD +Y +I + D+A ++++M +P+ H +
Sbjct: 457 QKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNY 516
Query: 119 ----------------------CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
ING R EA ++ + ++G + YN
Sbjct: 517 MMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKF 576
Query: 157 VGAYCWSMRINDAYRMMDEMRKCG 180
+ + + + Y + +++ G
Sbjct: 577 AADFSKAGKPDILYELAQKVKFTG 600
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 156/315 (49%), Gaps = 4/315 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I C+ + A E +M +R+ PD+ +Y IL++G + +E+ EM
Sbjct: 229 YNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMV 288
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PD V++ +++ C A +++ A L M NC+PS + TLI+GL ++ +
Sbjct: 289 DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVD 348
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + GF P+ TY+ + C RI++A+ ++ EM G PN TY+ ++
Sbjct: 349 RAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLI 408
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KA +TE+AY + + + G P V TY I+V C ++D A+++ + M RG
Sbjct: 409 DGLCKASKTEKAYELLESLV-SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 467
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ L+ LC ++D+A F+EM+ + +L + A
Sbjct: 468 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA-- 525
Query: 313 LAQKIDKLRKTPLVD 327
+ +D +R TP +D
Sbjct: 526 -QKVVDGIRGTPYID 539
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 145/316 (45%), Gaps = 31/316 (9%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + FN ++D LCK+ ERA + M +R P +Y L+ G +Q+N+
Sbjct: 291 GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 350
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ E GF PDVV+Y I+ + C R DEA EL +EM C P+ + TLI+G
Sbjct: 351 KDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDG 410
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +A + GF P+ TY +V C R++ A +M++ M K G P+
Sbjct: 411 LCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 470
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE-------------------------- 218
TY ++ L + GR +EA+ +FK M K T
Sbjct: 471 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD 530
Query: 219 -----PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
P + Y ++ +C ++D ++++M RG +P + Y+ +++ LC K+D
Sbjct: 531 GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 590
Query: 274 DACKYFQEMLDIGIRP 289
+A + + M G P
Sbjct: 591 EAFPFLESMHSAGCVP 606
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 5/301 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K E+ + L CK+ ++ A E+F + PD +Y ++ G ++ +
Sbjct: 190 GFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGA 245
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E +EM + PDV +Y I+I+ C A + D+A E+ EM P F ++++G
Sbjct: 246 LEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDG 305
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + A +R P TYN ++ C ++ A ++DE G P+
Sbjct: 306 LCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPD 365
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+ L K GR +EA+ + K MS K G P + TY ++ C ++ + A +
Sbjct: 366 VVTYSILADGLCKRGRIDEAFELVKEMSGK-GCTPNLVTYNTLIDGLCKASKTEKAYELL 424
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ + + G +P + Y+ +++ LC E +LD A K + ML G P ++ L + L
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 484
Query: 305 G 305
G
Sbjct: 485 G 485
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 164/338 (48%), Gaps = 34/338 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LCK ++V+RA+++ D+ F PD+ +Y+IL +G ++ + E+ +EM
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P++V+Y +I+ C A + ++A EL + ++ P + +++GL E RL
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKC----------- 179
+AL+ KRG P TY A++ C + R+++A+ + EM + C
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513
Query: 180 -GIGPNTRT------------------YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
G ++RT Y+ ++ K GR +E +VF+ M+ + G P
Sbjct: 514 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR-GCVPN 572
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
+ TY IV+ C + +VD A + M + G +P + Y+ +I+ L K +A +
Sbjct: 573 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 632
Query: 281 EMLDIGIRPPGQLFSNL-KQALRDEGMEETAVVLAQKI 317
+M+ GI P ++ L Q ++E ++ +L I
Sbjct: 633 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI 670
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 3/267 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ CKS + AQ+V D + R P I Y L++G+ ++ L + V+ +M G
Sbjct: 512 LVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 568
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P++ +Y I+++ C + DEA M + C P + +I+GL + EA
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q Q + G P+A TYN ++ +C R +DA ++ M K G+ P+ TY+ ++ L
Sbjct: 629 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ R +AY + M R +TY ++ C + A+ + D M GV
Sbjct: 689 SQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEAN 748
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEM 282
Y+ I+ LC E +LD+A EM
Sbjct: 749 TVTYNIFIDRLCKEGRLDEASSLLSEM 775
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 147/313 (46%), Gaps = 5/313 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K N + TL ++ +R +F++M + PD +Y ++++ Q +
Sbjct: 120 GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKA 179
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + K GF+P+V Y I+ A C R +A+E+FR + + P + +I+G
Sbjct: 180 FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHG 235
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ AL+F + +R P+ TYN ++ C + + + A M+ EM G+ P+
Sbjct: 236 HCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPD 295
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T T++ ++ L KAG+ E A+S+ M+ + P+ TY ++ C VD A +
Sbjct: 296 TVTFNSIMDGLCKAGKFERAHSLLAVMAER-NCRPSCCTYNTLISGLCKQQNVDRAKDLV 354
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DE + G +P + YS L + LC ++D+A + +EM G P ++ L L
Sbjct: 355 DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKA 414
Query: 305 GMEETAVVLAQKI 317
E A L + +
Sbjct: 415 SKTEKAYELLESL 427
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 131/287 (45%), Gaps = 6/287 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N ++D LCK V+ A + M PD+ SY I+++G +
Sbjct: 568 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 627
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V +M G PD V+Y ++ C +R+D+AV + + M P + TLI+G
Sbjct: 628 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 687
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEA-PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L RL +A + + + G A TYN ++ C + A +MD M G+
Sbjct: 688 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 747
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
NT TY+I + L K GR +EA S+ M T +Y V+ C Q+D A ++
Sbjct: 748 NTVTYNIFIDRLCKEGRLDEASSLLSEMD----TLRDEVSYTTVIIGLCKAEQLDRASKL 803
Query: 244 WDEMKA-RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM A +G+ H ++ LI++ +LD+A M+ G P
Sbjct: 804 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSP 850
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 35/316 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N +ID L K+ + A++V D+M + PD +Y L+ + +++
Sbjct: 599 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP-HIFC 119
+ + M G +PD V+Y +I+ R +A EL EM C S +
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+I+ L E L +AL G E TYN + C R+++A ++ EM
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 778
Query: 180 ---------------------------------GIGPNTRTYDIVLHHLIKAGRTEEAYS 206
G+ + T+++++ K R +EA +
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 838
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ M ++ G P+V TY +V+ C +VD A ++DEM RG++ Y+ LI L
Sbjct: 839 LLGLMVQR-GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 897
Query: 267 CHEDKLDDACKYFQEM 282
C + + +A + +EM
Sbjct: 898 CGQGRGKEALQVLEEM 913
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID LCK +++A + D M + + +Y I ++ ++ L + + EM
Sbjct: 717 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM- 775
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN--CKPSPHIFCTLINGLGSEKR 130
D D VSY +I C A++ D A +L REM A C S H F LI+ KR
Sbjct: 776 -DTLR-DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITS-HTFNLLIDAFTKTKR 832
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L EAL G +RG P TYN V+ C +++ A+ + DEM GI ++ +Y +
Sbjct: 833 LDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTV 892
Query: 191 VLHHLIKAGRTEEAYSVFKRMS 212
+++ L GR +EA V + M+
Sbjct: 893 LIYGLCGQGRGKEALQVLEEMA 914
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 5/229 (2%)
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D GF+ + + D +F M P + + +I L ++
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A ++K RGF+PE Y + A+C + R+ DA + + P+ Y+ ++
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAII 233
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H + + A K M+ + P V TY I++ C ++ D A + EM RGV
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERK-VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGV 292
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P ++++++ LC K + A M + RP ++ L L
Sbjct: 293 TPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGL 341
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID K++ ++ A + M +R P + +Y +++ + + E++ EM
Sbjct: 820 FNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMA 879
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
G VSY ++I C R EA+++ EM +++C+
Sbjct: 880 VRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCE 919
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N +I LCK V++A E+FD+M R SYT+L+ G Q
Sbjct: 843 MVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGR 902
Query: 61 LLSMNEVYREMKDDGFEPD 79
+V EM E D
Sbjct: 903 GKEALQVLEEMASSDCEID 921
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 4/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC++ ER EV +M + PDI+ Y +++G ++ +L NE+ M
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+VV Y ++ CSA+R+ EA EL EM +C F L++ +
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
++ Q G P+ TY V+ +C I++A ++ M CG PNT +Y IVL
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L AGR +A + +M ++ G P T+ ++ C V+ A+ + +M G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQ-GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + YST+I+ L K ++A + M++ GI P ++S++ AL EG +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI- 551
Query: 313 LAQKIDKLRKTPL 325
Q D ++ T +
Sbjct: 552 --QMFDNIKDTTI 562
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N ++ LC + + A+E+ +M ++ D ++ IL++ + Q
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M G PDV++Y +IN C DEAV L + M + CKP+ +
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL S R +A + Q ++G P T+N ++ C + A ++ +M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+TEEA + M K G P Y + +V+
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK-GISPNTIIYSSIACALSREGRVNKV 550
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D +K + +Y+ +I+SLC + D A +F M+ G P ++ L +
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610
Query: 301 LRDEGMEETA 310
L EG+ + A
Sbjct: 611 LASEGLAKEA 620
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 1/295 (0%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P ++ +++ C+S + V + M + D + ++L +Q + + R+
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ G E D+VSY ++ C AKR+ + EL EM +C P+ F TLI L
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ Q + G P+ Y ++ C + A +++ M G+ PN Y+
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
VL L A R +EA + M +K V T+ I+V FC N VD + + ++M +
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
G +P + Y+T+IN C E +D+A + M G +P ++ + + L G
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ + +I+ CK ++ A + M P+ SYTI+L+G
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M G P+ V++ +IN C ++A+EL ++M C P + T
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GLG + EAL+ +G P Y+++ A R+N +M D ++
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + Y+ V+ L K T+ A F M G P STY ++++ A
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN-GCMPNESTYTMLIKGLASEGLAKEA 620
Query: 241 MRIWDEMKARGVL 253
+ E+ +RG L
Sbjct: 621 QELLSELCSRGAL 633
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
VV+Y M+ +C A + A L + P+ + F ++ GL + R+++AL+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ +G P P Y+ ++ A C S ++ R+++ M G +T ++VL+ + + G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+EA + ++++ G E + +Y V++ C + + DEM P + +
Sbjct: 196 CVDEAVGLLRKLAFF-GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+TLI LC + + +M + G P ++++ + + EG E A
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 4/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC++ ER EV +M + PDI+ Y +++G ++ +L NE+ M
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+VV Y ++ CSA+R+ EA EL EM +C F L++ +
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
++ Q G P+ TY V+ +C I++A ++ M CG PNT +Y IVL
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L AGR +A + +M ++ G P T+ ++ C V+ A+ + +M G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQ-GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + YST+I+ L K ++A + M++ GI P ++S++ AL EG +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI- 551
Query: 313 LAQKIDKLRKTPL 325
Q D ++ T +
Sbjct: 552 --QMFDNIKDTTI 562
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N ++ LC + + A+E+ +M ++ D ++ IL++ + Q
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M G PDV++Y +IN C DEAV L + M + CKP+ +
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL S R +A + Q ++G P T+N ++ C + A ++ +M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+TEEA + M K G P Y + +V+
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK-GISPNTIIYSSIACALSREGRVNKV 550
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D +K + +Y+ +I+SLC + D A +F M+ G P ++ L +
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610
Query: 301 LRDEGMEETA 310
L EG+ + A
Sbjct: 611 LASEGLAKEA 620
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 1/295 (0%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P ++ +++ C+S + V + M + D + ++L +Q + + R+
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ G E D+VSY ++ C AKR+ + EL EM +C P+ F TLI L
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ Q + G P+ Y ++ C + A +++ M G+ PN Y+
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
VL L A R +EA + M +K V T+ I+V FC N VD + + ++M +
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
G +P + Y+T+IN C E +D+A + M G +P ++ + + L G
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ + +I+ CK ++ A + M P+ SYTI+L+G
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M G P+ V++ +IN C ++A+EL ++M C P + T
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GLG + EAL+ +G P Y+++ A R+N +M D ++
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + Y+ V+ L K T+ A F M G P STY ++++ A
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN-GCMPNESTYTMLIKGLASEGLAKEA 620
Query: 241 MRIWDEMKARGVL 253
+ E+ +RG L
Sbjct: 621 QELLSELCSRGAL 633
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
VV+Y M+ +C A + A L + P+ + F ++ GL + R+++AL+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ +G P P Y+ ++ A C S ++ R+++ M G +T ++VL+ + + G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+EA + ++++ G E + +Y V++ C + + DEM P + +
Sbjct: 196 CVDEAVGLLRKLAFF-GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+TLI LC + + +M + G P ++++ + + EG E A
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 11/317 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+DTLCK +V+ A E+F++ RF D+K YT+L+ GW + + EMK
Sbjct: 169 FTYLLDTLCKYGYVKHACELFNR-NSNRFVADVKMYTVLIYGWCKIGRFKTALSFLNEMK 227
Query: 73 DDGFEPDVVSYGIMINAHCSA------KRYDEAV----ELFREMEATNCKPSPHIFCTLI 122
G EP+VV+Y +++N C +R++ + ++F EM + +P F ++
Sbjct: 228 VKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVL 287
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ + L G K++G P TY +V+ C RI +A ++DEM + G+
Sbjct: 288 HVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVS 347
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P TY+ ++A FK+M EPT TY +++ MF + +
Sbjct: 348 PCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKE 407
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
IW++M GV P + Y+ LI+ LC K +AC+YF EM++ G P F L + L
Sbjct: 408 IWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLI 467
Query: 303 DEGMEETAVVLAQKIDK 319
M T L +++D+
Sbjct: 468 QSDMLRTWRRLKKRLDQ 484
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 46/253 (18%)
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
SY ++I+ ++D A +L EM+ N P+P F LI L S +A++ F +
Sbjct: 97 SYNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQAVRAFNEI 156
Query: 142 K--------------------KRG---------------FEPEAPTYNAVVGAYCWSMRI 166
+ K G F + Y ++ +C R
Sbjct: 157 ESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRNSNRFVADVKMYTVLIYGWCKIGRF 216
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG---------RT-EEAYSVFKRMSRKPG 216
A ++EM+ G+ PN TY+++L+ + + RT +A VF M R+ G
Sbjct: 217 KTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEM-RESG 275
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
EP V+++ IV+ ++ + + + MK +G+ P + Y+++I LC ++++A
Sbjct: 276 IEPDVTSFSIVLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAE 335
Query: 277 KYFQEMLDIGIRP 289
EM+ G+ P
Sbjct: 336 DLIDEMVRNGVSP 348
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 1 MDKFGLKQE------LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
+DK GL +E + + +I LC +E A+++ D+M + P +Y +
Sbjct: 300 LDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKE 359
Query: 55 WGQQKNLLSMNEVYREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
+ +K+ + +++MK+DG EP +YG++I A E++ +M + P
Sbjct: 360 YRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGP 419
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+ LI+GL K+ EA Q+F + ++GF P+ T+ +
Sbjct: 420 DLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETL 462
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 116/292 (39%), Gaps = 86/292 (29%)
Query: 5 GLKQELPDFNRLIDTLCKS----------RHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
G++ + +N +++ +C+ R + A++VFD+M++ +PD+ S++I+L
Sbjct: 230 GVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHV 289
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY------------------ 96
+ + + + MK+ G P+VV+Y +I CS R
Sbjct: 290 YSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPC 349
Query: 97 -----------------DEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
D+A++ F++M E C+P+ H
Sbjct: 350 AATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTH---------------------- 387
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
TY ++ + + I + ++M + G+GP+ +Y +++H L ++
Sbjct: 388 -------------TYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCES 434
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+ EA F M K G P T+E + R Q DM +R W +K R
Sbjct: 435 KKWREACQYFVEMIEK-GFLPQKVTFETLYRGL---IQSDM-LRTWRRLKKR 481
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 161/299 (53%), Gaps = 4/299 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD FN L+ +LCK ++ A++VFD M + +PD+ SY I+L G+ + L+ M +
Sbjct: 321 LPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M DG P + ++ ++I A+ + D+A+ +F EM KP+ + T+I L
Sbjct: 381 LFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALC 440
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A++ F Q +G P+ Y+ ++ +C + A ++ E+ G+ +
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+ ++++L K GR +A ++F ++ G PT Y +++ +C +++ A+R++D
Sbjct: 501 LFSSIINNLCKLGRVMDAQNIFD-LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + G+ P +Y TL+N C ++D+ F+EML GI+P L++ + L + G
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 155/305 (50%), Gaps = 3/305 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEGWGQQKN 60
+ G ++ ++ L+ +LC +A ++ M + PD+ +Y +++G+ ++ +
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGD 234
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++EM G PD V+Y +++A C A+ D+A R+M P+ +
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN 294
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G S + EA++ F + +++ P+ T+N ++G+ C +I +A + D M G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKG 354
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+I+L+ G + +F M G P + T+ ++++ + +D A
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLM-LGDGIAPVICTFNVLIKAYANCGMLDKA 413
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M I++EM+ GV P + Y+T+I +LC K+DDA + F +M+D G+ P + L Q
Sbjct: 414 MIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQG 473
Query: 301 LRDEG 305
G
Sbjct: 474 FCTHG 478
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 147/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + + +I LC+ ++ A E F++M + PD +Y L++G+ +
Sbjct: 420 MRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+ E+ ++G D+V + +IN C R +A +F P+ ++
Sbjct: 480 LLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ +AL+ F G EP Y +V YC RI++ + EM + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T Y+I++ L +AGRT A F M+ + G TY IV+R N D A
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT-ESGIAMNKCTYSIVLRGLFKNRCFDEA 658
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ E++A V + +T+I + ++++A F + G+ P +S +
Sbjct: 659 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718
Query: 301 LRDEGMEETA 310
L EG+ E A
Sbjct: 719 LIKEGLVEEA 728
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 157/341 (46%), Gaps = 17/341 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ ++ LCK+R +++A+ +M + P+ +Y L+ G+
Sbjct: 249 GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEA 308
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V++EM+ PDVV++ +++ + C + EA ++F M P + ++NG
Sbjct: 309 VRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 368
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ L + F G P T+N ++ AY ++ A + +EMR G+ PN
Sbjct: 369 YATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPN 428
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY V+ L + G+ ++A F +M + G P Y +++ FC + + A +
Sbjct: 429 VLTYTTVIAALCRIGKMDDAMEKFNQMIDQ-GVAPDKYAYHCLIQGFCTHGSLLKAKELI 487
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL------- 297
E+ G+ + ++S++IN+LC ++ DA F +++G+ P ++S L
Sbjct: 488 SEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV 547
Query: 298 ---KQALR------DEGMEETAVVLAQKIDKLRKTPLVDRG 329
++ALR G+E VV ++ K +D G
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 36/260 (13%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ F+ +I+ LCK V AQ +FD P Y++L++G+ +
Sbjct: 494 GMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G EP+ V YG ++N +C R DE + LFREM KPS ++ +I+G
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613
Query: 125 LGSEKR-----------------------------------LSEALQFFGQSKKRGFEPE 149
L R EA+ F + + + +
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 673
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
T N ++ + R+ +A + + + G+ P TY I++ +LIK G EEA +F
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFS 733
Query: 210 RMSRKPGTEPTVSTYEIVVR 229
M + G EP VVR
Sbjct: 734 SM-QNAGCEPDSRLLNHVVR 752
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 137/329 (41%), Gaps = 45/329 (13%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+R RAQ R P +Y IL++ + + ++ G D++
Sbjct: 95 NRAASRAQ------GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIII 148
Query: 83 YGIMINAHCSAKRYDEAV------------------------------------ELFREM 106
++ C AKR DEA+ +L R M
Sbjct: 149 ANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMM 208
Query: 107 E--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
C P + T+I+G E +++A F + +RG P+ TY++VV A C +
Sbjct: 209 AEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ A + +M G+ PN TY+ +++ G+ +EA VFK M R+ P V T+
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRQSILPDVVTF 327
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ C ++ A ++D M +G P + Y+ ++N + L D F ML
Sbjct: 328 NMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 387
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVL 313
GI P F+ L +A + GM + A+++
Sbjct: 388 DGIAPVICTFNVLIKAYANCGMLDKAMII 416
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 95/215 (44%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L++ CK ++ +F +M ++ P Y I+++G + + + EM
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G + +Y I++ + +DEA+ LF+E+ A N K T+I G+ +R+
Sbjct: 632 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 691
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + G P TY+ ++ + +A M M+ G P++R + V+
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
L+K A + ++ + + ++T +V
Sbjct: 752 RELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 22/223 (9%)
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
R + C+ P + L N S + R P + TY ++ +
Sbjct: 76 RAPSSAACRSGPALAVALFNRAASRAQ-----------GPRVLSPTSHTYAILMDCCTRA 124
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK----AGRTEEAYSVFKRMSRKPGTEP 219
R A ++ + G+ R I+ +HL+K A RT+EA + + + G P
Sbjct: 125 HRPELALAFFGQLLRTGL----RVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVP 180
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL--PVMHMYSTLINSLCHEDKLDDACK 277
V +Y I+++ C + A + M G + P + Y+T+I+ E ++ AC
Sbjct: 181 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACD 240
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
F+EM+ GI P +S++ AL + M++ L Q ++K
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 69/160 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ ++ L K+R + A +F +++ DI + ++ G Q +
Sbjct: 630 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 689
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ + G P VV+Y IMI +EA ++F M+ C+P +
Sbjct: 690 VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 749
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
++ L + + A + + +R F E T +V +
Sbjct: 750 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 160/311 (51%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + + ++ LI +LCK R V A ++F MK + P I +YT L++G
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM P+VV++ ++++ C + A + + M +P + +
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNS 225
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ G + EA + F +G +P+ +Y+ ++ YC + RI++A ++ +EM G
Sbjct: 226 LMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +Y+ ++H L + GR EA +FK M G P + TY I++ FC + A
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTN-GNLPNLYTYAILLDGFCKQGYLGKA 344
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ M++ + P + MY+ L+N++C L DA + F E+ IG++P Q+++ +
Sbjct: 345 FRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIING 404
Query: 301 LRDEGMEETAV 311
L EG+ + A+
Sbjct: 405 LCKEGLLDEAL 415
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 143/305 (46%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL N LI+ C+ + V+ V K K P I ++T L+ G G+
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E++ +M G +PD +Y +IN C A LF++ME C+ + + T
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L +R++EAL F K + P TY +++ C R +A +++EM
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T+++++ K G+ A V K M+ G EP V TY ++ + +V A
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEM-GVEPDVVTYNSLMYGYSMWTEVVEA 239
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++D M +G P + YS LIN C ++D+A + F EM+ G P ++ L
Sbjct: 240 RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299
Query: 301 LRDEG 305
L G
Sbjct: 300 LCQLG 304
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + FN L+DT CK V A+ V M + +PD+ +Y L+ G+
Sbjct: 176 MTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTE 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +++ M G +PDV SY I+IN +C AKR DEA +LF EM P+ + T
Sbjct: 236 VVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNT 295
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL RL EA F G P TY ++ +C + A+R+ M+
Sbjct: 296 LIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTY 355
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y+I+++ + K+G ++A +F + G +P V Y ++ C +D A
Sbjct: 356 LKPNLVMYNILVNAMCKSGNLKDARELFSEL-FVIGLQPNVQIYTTIINGLCKEGLLDEA 414
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+ + M+ G P Y+ +I A EM D G
Sbjct: 415 LEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+D CK ++ +A +F M+ P++ Y IL+ + NL E++ E+ G
Sbjct: 331 LLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIG 390
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+P+V Y +IN C DEA+E FR ME C P + +I G K S A+
Sbjct: 391 LQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAV 450
Query: 136 QFFGQSKKRGFEPEAPT 152
G+ + RGF +A T
Sbjct: 451 HLIGEMRDRGFITDAGT 467
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 1/182 (0%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P T N ++ +C R++ + ++ + K G+ P T+ +++ L K G+ +A
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+F M + G +P TY ++ C + +A ++ +M+ G + YSTLI+
Sbjct: 65 VELFDDMVAR-GCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIH 123
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
SLC ++++A F M I P +++L Q L + + A L ++ L P
Sbjct: 124 SLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMP 183
Query: 325 LV 326
V
Sbjct: 184 NV 185
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + + +I+ LCK ++ A E F M+ PD SY +++ G+ Q K+
Sbjct: 390 GLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRA 449
Query: 65 NEVYREMKDDGFEPD 79
+ EM+D GF D
Sbjct: 450 VHLIGEMRDRGFITD 464
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 151/285 (52%), Gaps = 4/285 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ + +ID+LCK+ HV+ A +F++M+ PD+ YT L+ G
Sbjct: 167 MVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGR 226
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R M +PDV+++ +I+A + +A EL+ EM + P+ + +
Sbjct: 227 WRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTS 286
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL E RL EA Q F + +G P+ Y +++ +C ++ DA ++ EM + G
Sbjct: 287 LINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ NT TY ++ G+ A VF M + G P + TY +++ CYN +V+ A
Sbjct: 347 LTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSR-GVPPNIRTYNVLLHCLCYNGKVNKA 405
Query: 241 MRIWDEMKAR---GVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ I+++M+ R GV P + Y+ L++ LC+ KL+ A F +M
Sbjct: 406 LMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDM 450
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 163/319 (51%), Gaps = 2/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G++ ++ + L++ LC S A + M KR+ PD+ ++ L++ + ++
Sbjct: 202 MENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGK 261
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+Y EM P++ +Y +IN C R DEA ++F ME C P + +
Sbjct: 262 LLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTS 321
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING K++ +A++ F + ++G TY ++ + + N A + M G
Sbjct: 322 LINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRG 381
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP--GTEPTVSTYEIVVRMFCYNAQVD 238
+ PN RTY+++LH L G+ +A +F+ M ++ G P + TY +++ CYN +++
Sbjct: 382 VPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLE 441
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A+ ++ +M+ R + + Y+ +I +C K+ DA F + G++P ++ +
Sbjct: 442 KALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMI 501
Query: 299 QALRDEGMEETAVVLAQKI 317
L EG+ A VL +K+
Sbjct: 502 SGLFREGLMLEAHVLFRKM 520
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L N L++ C+S A K+ K F+PDI ++T L+ G+ +
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEA 160
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M + G +PDVV Y +I++ C D A+ LF +ME +P ++ +L+NG
Sbjct: 161 MSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R +A KR +P+ T+NA++ A+ ++ DA + +EM + I PN
Sbjct: 221 LCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPN 280
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ L GR +EA +F M K G P V Y ++ FC +V+ AM+I+
Sbjct: 281 IFTYTSLINGLCMEGRLDEARQMFYLMETK-GCFPDVVAYTSLINGFCKCKKVEDAMKIF 339
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM +G+ Y+TLI K + A + F M+ G+ P + ++ L L
Sbjct: 340 YEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYN 399
Query: 305 GMEETAVVLAQKIDK 319
G A+++ + + K
Sbjct: 400 GKVNKALMIFEDMQK 414
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 137/299 (45%), Gaps = 1/299 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF RL++ + K + + + ++ D+ + +L+ + Q + ++
Sbjct: 73 DFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKL 132
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GFEPD+ ++ +IN C R +EA+ + +M KP I+ T+I+ L +
Sbjct: 133 MKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHV 192
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
AL F Q + G P+ Y ++V C S R DA ++ M K I P+ T++ +
Sbjct: 193 DNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNAL 252
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ +K G+ +A ++ M + P + TY ++ C ++D A +++ M+ +G
Sbjct: 253 IDAFVKEGKLLDAKELYNEMIQMS-IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKG 311
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P + Y++LIN C K++DA K F EM G+ ++ L Q G A
Sbjct: 312 CFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVA 370
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 129/275 (46%), Gaps = 1/275 (0%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
S A ++F M + R P I +T LL + K + + + ++ G D+ +
Sbjct: 49 SLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYT 108
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+++N C + + A ++ +P F +LING R+ EA+ Q
Sbjct: 109 CNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV 168
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+ G +P+ Y ++ + C + +++A + ++M GI P+ Y +++ L +GR
Sbjct: 169 EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWR 228
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
+A + + M ++ +P V T+ ++ F ++ A +++EM + P + Y++L
Sbjct: 229 DADLLLRGMMKRK-IKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL 287
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
IN LC E +LD+A + F M G P +++L
Sbjct: 288 INGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSL 322
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 118 FCT----LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
FC L NGL S + +EAL F + P + ++ + + +
Sbjct: 36 FCNYREILRNGLHSLQ-FNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLC 94
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
++ G+ + T +++++ ++ + A S ++ K G EP + T+ ++ FC
Sbjct: 95 KHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKL-MKLGFEPDIFTFTSLINGFCL 153
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+++ AM + ++M G+ P + +Y+T+I+SLC +D+A F +M + GIRP +
Sbjct: 154 GNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVM 213
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+++L L + G A +L + + K + P
Sbjct: 214 YTSLVNGLCNSGRWRDADLLLRGMMKRKIKP 244
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD---PDIKSYTILLEGWGQQKNL 61
G+ + +N L+ LC + V +A +F+ M+KR D P+I++Y +LL G L
Sbjct: 381 GVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKL 440
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
V+ +M+ + +++Y I+I C A + +A+ LF + + KP+ + T+
Sbjct: 441 EKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTM 500
Query: 122 INGLGSEKRLSEALQFFGQSKKRG 145
I+GL E + EA F + K+ G
Sbjct: 501 ISGLFREGLMLEAHVLFRKMKEDG 524
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M + GL + LI AQEVF M R P+I++Y +LL G+
Sbjct: 342 MSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGK 401
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
L + E ++ + DG P++ +Y ++++ C + ++A+ +F +M+ +
Sbjct: 402 VNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIIT 461
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +I G+ ++ +AL F +G +P TY ++ + +A+ + +M+
Sbjct: 462 YTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMK 521
Query: 178 KCGI 181
+ G+
Sbjct: 522 EDGV 525
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 158/314 (50%), Gaps = 6/314 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL Q+L FN L+D LCKS VE A ++ +K RF PD SY IL G+ +K
Sbjct: 162 MHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKS-RFRPDTVSYNILANGYCLKKR 220
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V +EM G EP +V+Y M+ + + + EA E + EM+ C+ + T
Sbjct: 221 TPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTT 280
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G G + +A + F + K G P TYNA++ +C + +A + +EM + G
Sbjct: 281 VIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREG 340
Query: 181 I-GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ PN T+++V+ L G E A +RM + G +V TY +V+R FC +++
Sbjct: 341 VCSPNVVTFNVVIRGLCHVGDMERALGFMERMG-EHGLRASVQTYNVVIRYFCDAGEIEK 399
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFSN 296
+ ++ +M LP + Y+ LI+++ K +D A K EM++ G P F+
Sbjct: 400 GLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNR 459
Query: 297 LKQALRDEGMEETA 310
+ L G ++ A
Sbjct: 460 VLNGLVITGNQDFA 473
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 141/297 (47%), Gaps = 7/297 (2%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
F+ +D + R A + +M+ R P K+ IL E + + M
Sbjct: 103 SFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSM 162
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G D+ S+ +++ C + R + A +L R ++ + +P + L NG +KR
Sbjct: 163 HEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLK-SRFRPDTVSYNILANGYCLKKRT 221
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKCGIGPNTRTYD 189
AL+ + +RG EP TYN ++ Y S +I +A+ EM RKC I + +Y
Sbjct: 222 PMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEI--DVVSYT 279
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
V+H +AG ++A VF M K G P V+TY ++++FC V A+ +++EM
Sbjct: 280 TVIHGFGEAGEVKKAKRVFDEMV-KEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVR 338
Query: 250 RGVL-PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
GV P + ++ +I LCH ++ A + + M + G+R Q ++ + + D G
Sbjct: 339 EGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAG 395
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 107/274 (39%), Gaps = 39/274 (14%)
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
K LL + R + P + + I A + ++ A L M + PSP
Sbjct: 82 KALLFFKHLDRHLPSYTHSPSSFDHAVDIAARM--RDFNSAWALVGRMRSLRLGPSPKTL 139
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L S + A++ F + G + ++N ++ C S R+ A+ ++ + K
Sbjct: 140 AILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTL-K 198
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE------------- 225
P+T +Y+I+ + RT A V K M ++ G EPT+ TY
Sbjct: 199 SRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQR-GIEPTMVTYNTMLKGYFRSNQIK 257
Query: 226 ----------------------IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
V+ F +V A R++DEM GV P + Y+ LI
Sbjct: 258 EAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALI 317
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
C +D + +A F+EM+ G+ P + N+
Sbjct: 318 QVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNV 351
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 146/297 (49%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + +N LID KS + +A E+ +MK R+ P +Y++L+ G +L
Sbjct: 411 GLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKA 470
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
NEV +M +G +P+V YG +I A+ RY+ A+EL + M A P + LI G
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L K++ EA ++G +P A TY A + Y S I A R +M GI PN
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y I++ G T EA S FK M K G P + Y ++ N + AM ++
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEK-GLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ GV+P + +Y++LI+ C E ++ A + + EML GI P +++ L L
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGL 706
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 154/317 (48%), Gaps = 2/317 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+ ++ +N LI CK +E+A +++D+M +P+I Y L+ G + +
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVT 713
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E++ E+++ PDVV+Y +I+ +C + EA +LF EM + P +I+C LI
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G G E L +AL F +++++ +N+++ ++C ++ +A + D+M +
Sbjct: 774 DGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLT 832
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY I++ KA EEA +F M + P TY ++ + +
Sbjct: 833 PNIVTYTILIDAYGKAEMMEEAEQLFLDMETR-NIIPNTLTYTSLLLSYNQIGNRFKMIS 891
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ +M+ARG+ Y + ++ C E K +A K + L GI+ +F L L
Sbjct: 892 LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 951
Query: 303 DEGMEETAVVLAQKIDK 319
E T + L ++ K
Sbjct: 952 KEKQISTVLELLSEMGK 968
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 148/324 (45%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + LID K ++E A + D+M R ++ +Y ++ G +
Sbjct: 337 MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G EPD +Y ++I+ + + +A EL EM+A PSP +
Sbjct: 397 MAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L +A + Q + G +P Y ++ AY R A ++ M G
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ Y+ ++ L +A + EEA + M K G +P TY + ++ + ++ +A
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEK-GIKPNAHTYGAFINLYSKSGEIQVA 575
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R + +M + G++P +Y+ LI C +A F+ ML+ G+ P + +S + +
Sbjct: 576 ERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A+ + K K P
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVP 659
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 143/302 (47%), Gaps = 2/302 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ L K+ + +V+ M + + PD+ +YT +++ + +++ V EM+
Sbjct: 211 NNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK 270
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+ +P++ +Y I C DEA+E+ + M P H + L++G +KR E
Sbjct: 271 EC-KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A F G P TY A++ + I +A R+ DEM G+ N TY+ ++
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
+ KAG +A S+F M G EP TY +++ + + + A + EMKAR +
Sbjct: 390 GIAKAGEMAKAMSLFNEM-LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P YS LI+ LCH L A + +M+ G++P ++ L +A E E A+ L
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508
Query: 314 AQ 315
+
Sbjct: 509 LK 510
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 140/301 (46%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + L+D CK + + A+ +F+ M +P+ +YT L++G+ ++ N+
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEA 365
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM G + +VV+Y MI A +A+ LF EM +P + LI+G
Sbjct: 366 LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDG 425
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+++A + + K R P TY+ ++ C S + A ++D+M + G+ PN
Sbjct: 426 YLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPN 485
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ ++ R E A + K M G P + Y ++ C +V+ A +
Sbjct: 486 VFMYGTLIKAYVQESRYEMAIELLKIMIAN-GVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M +G+ P H Y IN ++ A +YF++ML GI P +++ L + D
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDV 604
Query: 305 G 305
G
Sbjct: 605 G 605
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 140/288 (48%), Gaps = 1/288 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K L +N I LC++ V+ A EV M ++ PD +YT+L++G+ +QK
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M G P+ +Y +I+ +EA+ + EM K + + +I G+
Sbjct: 333 IFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIA 392
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+++A+ F + G EP+ TYN ++ Y S + A ++ EM+ + P+
Sbjct: 393 KAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPF 452
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY +++ L + ++A V +M R G +P V Y +++ + ++ +MA+ +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRN-GVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
M A GVLP + Y+ LI LC K+++A +M + GI+P +
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTY 559
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + +N +I + K+ + +A +F++M +PD +Y +L++G+ + ++
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKA 435
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ EMK P +Y ++I+ C + +A E+ +M KP+ ++ TLI
Sbjct: 436 CELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKA 495
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E R A++ G P+ YN ++ C + ++ +A ++ +M + GI PN
Sbjct: 496 YVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPN 555
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ K+G + A FK M G P Y I+++ C A+ +
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDM-LSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M +G++P + YS +I+SL K +A F + L G+ P L+++L E
Sbjct: 615 KCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKE 674
Query: 305 GMEETA 310
G E A
Sbjct: 675 GDIEKA 680
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 141/313 (45%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K + + LI + E A E+ M PD+ Y L+ G + K
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G +P+ +YG IN + + A F++M ++ P+ I+
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G EAL F ++G P+ Y+A++ + + + +A + + K G
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ Y+ ++ K G E+A ++ M G P + Y ++ C +V A
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHN-GINPNIVVYNTLINGLCKLGEVTKA 715
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++DE++ + ++P + YST+I+ C L +A K F EM+ GI P G ++ L
Sbjct: 716 RELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 775
Query: 301 LRDEGMEETAVVL 313
EG E A+ L
Sbjct: 776 CGKEGNLEKALSL 788
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 140/285 (49%), Gaps = 2/285 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI C + A F M ++ PDI++Y+ ++ + V+ +
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV Y +I+ C ++A +L+ EM P+ ++ TLINGL ++
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVT 713
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + F + +++ P+ TY+ ++ YC S + +A+++ DEM GI P+ Y I++
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G E+A S+F +K + ++S + ++ FC + +V A ++D+M + +
Sbjct: 774 DGCGKEGNLEKALSLFHEAQQK--SVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKL 831
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P + Y+ LI++ + +++A + F +M I P +++L
Sbjct: 832 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 876
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 106/211 (50%), Gaps = 1/211 (0%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L FN LID+ CK V A+E+FD M ++ P+I +YTIL++ +G+ + + +++
Sbjct: 800 LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFL 859
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M+ P+ ++Y ++ ++ + + LF++MEA + + + E
Sbjct: 860 DMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 919
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ EAL+ +S G + E ++A++ C +I+ ++ EM K + +++T +
Sbjct: 920 KSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 979
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
+L K+G +EA V M R G PT
Sbjct: 980 TLLLGFYKSGNEDEASKVLGVMQR-LGWVPT 1009
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 128/288 (44%), Gaps = 44/288 (15%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL-- 61
K +PD ++ +ID CKS ++ A ++FD+M + PD Y IL++G G++ NL
Sbjct: 725 KDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK 784
Query: 62 --------------------------------LSMNEVYREMKDDGFEPDVVSYGIMINA 89
+ E++ +M D P++V+Y I+I+A
Sbjct: 785 ALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 844
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLI---NGLGSEKRLSEALQFFGQSKKRGF 146
+ A+ +EA +LF +ME N P+ + +L+ N +G+ ++ + F + RG
Sbjct: 845 YGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM---ISLFKDMEARGI 901
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+A Y + AYC + +A +++++ GI +D ++ HL K +
Sbjct: 902 ACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLE 961
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+ M ++ + + T ++ F + D A ++ M+ G +P
Sbjct: 962 LLSEMGKEELSLSS-KTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 4/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC++ ER EV +M + PDI+ Y +++G ++ +L NE+ M
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+VV Y ++ CSA+R+ EA EL EM +C F L++ +
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
++ Q G P+ TY V+ +C I++A ++ M CG PNT +Y IVL
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L AGR +A + +M ++ G P T+ ++ C V+ A+ + +M G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQ-GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + YST+I+ L K ++A + M++ GI P ++S++ AL EG +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI- 551
Query: 313 LAQKIDKLRKTPL 325
Q D ++ T +
Sbjct: 552 --QMFDNIKDTTI 562
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N ++ LC + + A+E+ +M ++ D ++ IL++ + Q
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M G PDV++Y +IN C DEAV L + M + CKP+ +
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL S R +A + Q ++G P T+N ++ C + A ++ +M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+TEEA + M K G P Y + +V+
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK-GISPNTIIYSSIACALSREGRVNKV 550
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D +K + +Y+ +I+SLC + D A +F M+ G P ++ L +
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610
Query: 301 LRDEGMEETA 310
L EG+ + A
Sbjct: 611 LASEGLAKEA 620
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 1/295 (0%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P ++ +++ C+S + V + M + D + ++L +Q + + R+
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ G E D+VSY ++ C AKR+ + EL EM +C P+ F TLI L
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ Q + G P+ Y ++ C + A +++ M G+ PN Y+
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
VL L A R +EA + M +K V T+ I+V FC N VD + + ++M +
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
G +P + Y+T+IN C E +D+A + M G +P ++ + + L G
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ + +I+ CK ++ A + M P+ SYTI+L+G
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M G P+ V++ +IN C ++A+EL ++M C P + T
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GLG + EAL+ +G P Y+++ A R+N +M D ++
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + Y+ V+ L K T+ A F M G P STY ++++ A
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN-GCMPNESTYTMLIKGLASEGLAKEA 620
Query: 241 MRIWDEMKARGVL 253
+ E+ +RG L
Sbjct: 621 QELLSELCSRGAL 633
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
VV+Y M+ +C A + A L + P+ + F ++ GL + R+++AL+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ +G P P Y+ ++ A C S ++ R+++ M G +T ++VL+ + + G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+EA + ++++ G E + +Y V++ C + + DEM P + +
Sbjct: 196 CVDEAVGLLRKLAFF-GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+TLI LC + + +M + G P ++++ + + EG E A
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 4/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC++ ER EV +M + PDI+ Y +++G ++ +L NE+ M
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+VV Y ++ CSA+R+ EA EL EM +C F L++ +
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
++ Q G P+ TY V+ +C I++A ++ M CG PNT +Y IVL
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L AGR +A + +M ++ G P T+ ++ C V+ A+ + +M G
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQ-GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + YST+I+ L K ++A + M++ GI P ++S++ AL EG +
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI- 551
Query: 313 LAQKIDKLRKTPL 325
Q D ++ T +
Sbjct: 552 --QMFDNIKDTTI 562
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 149/310 (48%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N ++ LC + + A+E+ +M ++ D ++ IL++ + Q
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M G PDV++Y +IN C DEAV L + M + CKP+ +
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL S R +A + Q ++G P T+N ++ C + A ++ +M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+TEEA + M K G P Y + +V+
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK-GISPNTIIYSSIACALSREGRVNKV 550
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D +K + +Y+ +I+SLC + D A +F M+ G P ++ L +
Sbjct: 551 IQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKG 610
Query: 301 LRDEGMEETA 310
L EG+ + A
Sbjct: 611 LASEGLAKEA 620
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 132/295 (44%), Gaps = 1/295 (0%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P ++ +++ C+S + V + M + D + ++L +Q + + R+
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ G E D+VSY ++ C AKR+ + EL EM +C P+ F TLI L
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ Q + G P+ Y ++ C + A +++ M G+ PN Y+
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
VL L A R +EA + M +K V T+ I+V FC N VD + + ++M +
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDV-TFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
G +P + Y+T+IN C E +D+A + M G +P ++ + + L G
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAG 440
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ + +I+ CK ++ A + M P+ SYTI+L+G
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGR 441
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M G P+ V++ +IN C ++A+EL ++M C P + T
Sbjct: 442 WVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 501
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GLG + EAL+ +G P Y+++ A R+N +M D ++
Sbjct: 502 VIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTT 561
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + Y+ V+ L K T+ A F M G P STY ++++ A
Sbjct: 562 IRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSN-GCMPNESTYTMLIKGLASEGLAKEA 620
Query: 241 MRIWDEMKARGVL 253
+ E+ +RG L
Sbjct: 621 QELLSELCSRGAL 633
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
VV+Y M+ +C A + A L + P+ + F ++ GL + R+++AL+
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPV---PPNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ +G P P Y+ ++ A C S ++ R+++ M G +T ++VL+ + + G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+EA + ++++ G E + +Y V++ C + + DEM P + +
Sbjct: 196 CVDEAVGLLRKLAFF-GCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+TLI LC + + +M + G P ++++ + + EG E A
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVA 305
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 158/313 (50%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G + +N LID CK R ++ E+ M + +P++ SY +++ G ++
Sbjct: 231 MEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ V EM G+ D V+Y +I +C + +A+ + EM PS + +
Sbjct: 291 MKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTS 350
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ + ++ A +F Q + RG P TY +V + +N+AYR++ EM G
Sbjct: 351 LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ +++ AG+ +A +V + M K G P V +Y V+ FC + VD A
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEK-GLTPDVVSYSTVLSGFCRSYDVDEA 469
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R+ +M A+G+ P YS+LI C + + +AC F EML +G+ P ++ L A
Sbjct: 470 LRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINA 529
Query: 301 LRDEGMEETAVVL 313
EG + A+ L
Sbjct: 530 YCMEGDLQKAIQL 542
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 155/313 (49%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ L +N +I+ LC+ ++ V +M KR + D +Y L++G+ ++ N
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G P V++Y +I++ C A + A E +M P+ + TL++G
Sbjct: 330 LVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++EA + + GF P TYNA++ +C + ++ DA ++++M++ G+ P+
Sbjct: 390 FSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPD 449
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y VL ++ +EA V ++M K G +P TY +++ FC + A ++
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKRKMVAK-GIKPDTITYSSLIQGFCEQRRTKEACDLF 508
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM G+ P Y+ LIN+ C E L A + EM++ G+ P +S L L +
Sbjct: 509 DEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 305 GMEETAVVLAQKI 317
A L K+
Sbjct: 569 ARTREAKRLLLKL 581
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI C + +++ A FD+M+K+ P++ +Y L++G+ + + + E+ R M
Sbjct: 208 YNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMA 267
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP+++SY ++IN C R E + EM + TLI G E
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL + + G P TY +++ + C + +N A +D+MR G+ PN RTY ++
Sbjct: 328 QALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLV 387
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G EAY V K M G P+V TY ++ C ++ A+ + ++MK +G+
Sbjct: 388 DGFSQKGYMNEAYRVLKEMIDN-GFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGL 446
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + YST+++ C +D+A + ++M+ GI+P +S+L Q
Sbjct: 447 TPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGF 495
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 154/313 (49%), Gaps = 22/313 (7%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LI ++CK+ ++ RA E D+M+ R P+ ++YT L++G+ Q+
Sbjct: 336 MLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKG- 394
Query: 61 LLSMNEVYR---EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
MNE YR EM D+GF P VV+Y +IN HC A + +A+ + +M+ P
Sbjct: 395 --YMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVS 452
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+++G + EAL+ + +G +P+ TY++++ +C R +A + DEM
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEML 512
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ G+ P+ TY +++ G ++A + M K G P V TY +++ A+
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEK-GVLPDVVTYSVLINGLNKQART 571
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINS---------------LCHEDKLDDACKYFQEM 282
A R+ ++ +P Y TLI + C + + +A + F+ M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 283 LDIGIRPPGQLFS 295
L+ +P G ++
Sbjct: 632 LEKNHKPDGTAYN 644
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 145/293 (49%), Gaps = 12/293 (4%)
Query: 30 QEVFD--KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMI 87
QE +D FD +KSY+ L + +++ +++ + GF P V+SY ++
Sbjct: 124 QETYDLCNSTSSVFDLVVKSYSRLCL-IDKALSIVHLSQAH------GFMPGVLSYNAVL 176
Query: 88 NAHCSAKRYDEAVE-LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
+A +KR E +F+EM + P+ + LI G L AL+FF + +K+G
Sbjct: 177 DATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGC 236
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P TYN ++ YC +I+D + ++ M G+ PN +Y++V++ L + GR +E
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISF 296
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
V M+++ G TY +++ +C A+ + EM G+ P + Y++LI+S+
Sbjct: 297 VLTEMNKR-GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSM 355
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKID 318
C ++ A ++ +M G+ P + ++ L +G M E VL + ID
Sbjct: 356 CKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMID 408
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 16/265 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + ++ LI C+ R + A ++FD+M + PD +YT L+ + + +L
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKA 539
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI-- 122
+++ EM + G PDVV+Y ++IN R EA L ++ PS + TLI
Sbjct: 540 IQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 123 -------------NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
G + ++EA Q F ++ +P+ YN ++ +C I A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKA 659
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
Y + EM K G +T T ++ L K G+ E SV + R +++V
Sbjct: 660 YSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEA-EQAKVLVE 718
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLP 254
+ +D+ + + EM G LP
Sbjct: 719 INHREGNMDVVLDVLAEMAKDGFLP 743
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 6/240 (2%)
Query: 92 SAKRYDE--AVELFREMEATN--CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
+AK D+ A +FR ++ T C + +F ++ + +AL S+ GF
Sbjct: 107 AAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFM 166
Query: 148 PEAPTYNAVVGAYCWSMR-INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P +YNAV+ A S R I+ A + EM + + PN TY+I++ AG + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALR 226
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
F RM +K G P V TY ++ +C ++D + M +G+ P + Y+ +IN L
Sbjct: 227 FFDRMEKK-GCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGL 285
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
C E ++ + EM G ++ L + EG A+V+ ++ + +P V
Sbjct: 286 CREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSV 345
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 153/299 (51%), Gaps = 1/299 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LC + A V D M +R PD+ +YTILLE ++ ++ EM+
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PD+V+Y +++N C R D+A+E + + + C+P+ + ++ GL + +R
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + ++G P T+N ++ C + A ++D++ K G PN+ +Y+ +L
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H K + + A + F + G P + +Y ++ C +VD A+ + ++K +G
Sbjct: 335 HAFCKQKKMDRAMA-FVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 393
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
PV+ Y+T+I+ L K ++A + EM+ G++P +S + L EG E A+
Sbjct: 394 TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAI 452
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 155/301 (51%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + L++ CK ++A ++ D+M+ + PDI +Y +++ G Q+
Sbjct: 178 MLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGR 237
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E + + G EP+ VSY I++ C+A+R+++A +L EM P+ F
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + A++ Q K G P + +YN ++ A+C +++ A ++ M G
Sbjct: 298 LISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSG 357
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+ +L L + G + A + ++ K G P + +Y V+ + + A
Sbjct: 358 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK-GCTPVLISYNTVIDGLTKAGKTEEA 416
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +EM +G+ P + YST+ + LC E ++++A K F ++ D+GIRP L++ +
Sbjct: 417 LELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLG 476
Query: 301 L 301
L
Sbjct: 477 L 477
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 139/311 (44%), Gaps = 9/311 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LI LC S A+ V +PD+ SY ++ G+ L + + M
Sbjct: 96 LIKKLCASGRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP--- 147
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
EPD +Y +I C R D A+ + +M C P + L+ +A+
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + + +G P+ TYN VV C R++DA + + G PNT +Y+IVL L
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
A R E+A + MSRK G P V T+ +++ C V+ AM I D++ G P
Sbjct: 268 CTAERWEDAEKLMAEMSRK-GRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPN 326
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
Y+ ++++ C + K+D A + + M+ G P ++ L AL G + AV L
Sbjct: 327 SLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLH 386
Query: 316 KIDKLRKTPLV 326
++ TP++
Sbjct: 387 QLKDKGCTPVL 397
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 6/264 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI LC+ VE A E+ D++ K P+ SY +L + +QK
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKK 342
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G PD+VSY ++ A C D AVEL +++ C P + T
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + EAL+ + +G +P+ TY+ + C RI +A + +++ G
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PNT Y+ +L L K T A +F M G P STY I++ Y V A
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSN-GCMPNESTYTILIEGLAYEGLVKEA 521
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN 264
+ E+ +RGV+ TL+N
Sbjct: 522 REMMAELCSRGVVS-----KTLVN 540
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 145/306 (47%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +++ +C+ V+ A E + +P+ SY I+L+G +
Sbjct: 217 GCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDA 276
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G P+VV++ ++I+ C + A+E+ ++ C P+ + +++
Sbjct: 277 EKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHA 336
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+K++ A+ F G P+ +YN ++ A C ++ A ++ +++ G P
Sbjct: 337 FCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 396
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ V+ L KAG+TEEA + M K G +P + TY + C +++ A++ +
Sbjct: 397 LISYNTVIDGLTKAGKTEEALELLNEMVTK-GLQPDIITYSTISSGLCREGRIEEAIKAF 455
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+++ G+ P +Y+ ++ LC A F M+ G P ++ L + L E
Sbjct: 456 CKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYE 515
Query: 305 GMEETA 310
G+ + A
Sbjct: 516 GLVKEA 521
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 165/324 (50%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+D+ + ++ +N ++ TLC S +++A EV D+ ++ PD+ +YTIL+E ++
Sbjct: 150 LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESG 209
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM++ G +PDVV+Y ++IN C R DEA++ M + C+P+
Sbjct: 210 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 269
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + S R +A + ++G P T+N ++ C + A ++++M G
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 329
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ +Y+ +LH K + + A M + G P + TY ++ C + +VD+A
Sbjct: 330 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR-GCYPDIVTYNTLLTALCKDGKVDVA 388
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I +++ ++G PV+ Y+T+I+ L K + A K EM G++P +S+L
Sbjct: 389 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 448
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG + A+ ++ L P
Sbjct: 449 LSREGKVDEAIKFFHDLEGLGIRP 472
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 163/326 (50%), Gaps = 9/326 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++ G ++ +N LI CKS ++ A +V D+M PD+ +Y +L
Sbjct: 118 LEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGK 174
Query: 61 LLSMNEVY-REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L EV R+++ + + PDV++Y I+I A C +A++L EM KP +
Sbjct: 175 LKQAMEVLDRQLQKECY-PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYN 233
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LING+ E RL EA++F G +P T+N ++ + C + R DA +++ +M +
Sbjct: 234 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 293
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ T++I+++ L + G A + ++M G P +Y ++ FC ++D
Sbjct: 294 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH-GCTPNSLSYNPLLHGFCKEKKMDR 352
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ D M +RG P + Y+TL+ +LC + K+D A + ++ G P ++ +
Sbjct: 353 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVID 412
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPL 325
L G E A+ L +D++R+ L
Sbjct: 413 GLSKVGKTERAIKL---LDEMRRKGL 435
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 153/323 (47%), Gaps = 7/323 (2%)
Query: 7 KQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+ ++PD LI C+ ++A V + +++ PD+ +Y +L+ G+ + + +
Sbjct: 86 RGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDN 145
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+V M PDVV+Y ++ C + + +A+E+ C P + LI
Sbjct: 146 ALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIE 202
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E + +A++ + + +G +P+ TYN ++ C R+++A + ++ M G P
Sbjct: 203 ATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP 262
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++I+L + GR +A + M RK G P+V T+ I++ C + A+ I
Sbjct: 263 NVITHNIILRSMCSTGRWMDAEKLLSDMLRK-GCSPSVVTFNILINFLCRQGLLGRAIDI 321
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++M G P Y+ L++ C E K+D A +Y M+ G P ++ L AL
Sbjct: 322 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK 381
Query: 304 EGMEETAVVLAQKIDKLRKTPLV 326
+G + AV + ++ +P++
Sbjct: 382 DGKVDVAVEILNQLSSKGCSPVL 404
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 164/355 (46%), Gaps = 39/355 (10%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG--- 54
+D+ K+ PD + LI+ CK V +A ++ D+M+ + PD+ +Y +L+ G
Sbjct: 182 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 241
Query: 55 ----------------WGQQKNLLSMNEVYREMKDDG----------------FEPDVVS 82
+G Q N+++ N + R M G P VV+
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ I+IN C A+++ +M C P+ + L++G EK++ A+++
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
RG P+ TYN ++ A C +++ A +++++ G P TY+ V+ L K G+TE
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
A + M RK G +P + TY +V +VD A++ + +++ G+ P Y+++
Sbjct: 422 RAIKLLDEMRRK-GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 480
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ LC + D A + M+ +P ++ L + + EG+ + A+ L ++
Sbjct: 481 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI+ LC+ + RA ++ +KM P+ SY LL G+ ++K
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E M G PD+V+Y ++ A C + D AVE+ ++ + C P + T
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + A++ + +++G +P+ TY+++V ++++A + ++ G
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ L K+ +T+ A M K +PT +TY I++ Y A
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR-CKPTEATYTILIEGIAYEGLAKEA 528
Query: 241 MRIWDEMKARGVL 253
+ + +E+ +RG++
Sbjct: 529 LDLLNELCSRGLV 541
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 161/310 (51%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G L + +I LCK H A ++ KM+++ PD+ +Y +++ + +
Sbjct: 167 IGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRR 226
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM D G P+VV+Y +++ C+ + +EA LF++M N P+ F
Sbjct: 227 ANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTI 286
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL E + EA + F + G EP+A TY+A++ YC ++++A ++ D M G
Sbjct: 287 LVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKG 346
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ R Y+I+++ K+ R EA ++ M + T TV TY +++ FC + +A
Sbjct: 347 FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV-TYSTLMQGFCQAGRPQVA 405
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ EM + G+LP YS L++ LC LD+A + + M + I P +++ L Q
Sbjct: 406 QKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQG 465
Query: 301 LRDEGMEETA 310
+ + G E A
Sbjct: 466 MCNFGKLEAA 475
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 153/312 (49%), Gaps = 3/312 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSR--HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
MD ++ + LI+ LC S HV A KM K P ++ LL G +
Sbjct: 95 MDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSK 154
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ +++ E+ GF P +++Y +I C A++L ++ME CKP +
Sbjct: 155 AKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAY 214
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
T+I+ L ++R +EA+ FF + +G P TY++++ +C ++N+A + +M
Sbjct: 215 NTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIG 274
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ PNT T+ I++ L K G EA VF+ M+ G EP TY ++ +C +Q+D
Sbjct: 275 RNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTEN-GVEPDAYTYSALMDGYCLQSQMD 333
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +++D M +G P + +Y+ LIN C +L++A EM D + P +S L
Sbjct: 334 EAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLM 393
Query: 299 QALRDEGMEETA 310
Q G + A
Sbjct: 394 QGFCQAGRPQVA 405
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 156/317 (49%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K ++ +N +ID+LCK R A F +M + P++ +Y+ +L G+
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++++M P+ V++ I+++ C EA +F M +P + +
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSA 321
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + ++ EA + F +GF P YN ++ +C S R+N+A ++ EM
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD 381
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T TY ++ +AGR + A +FK M G P TY I++ C + +D A
Sbjct: 382 LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY-GLLPDSITYSILLDGLCKHGHLDEA 440
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ M+ + P + +Y+ LI +C+ KL+ A + F + GI+P ++ +
Sbjct: 441 FRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISG 500
Query: 301 LRDEGMEETAVVLAQKI 317
L EG+ A + +K+
Sbjct: 501 LLKEGLSNEACEMFRKM 517
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 157/313 (50%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ ++ C + A +F +M R P+ ++TIL++G ++ +L
Sbjct: 241 GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEA 300
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M ++G EPD +Y +++ +C + DEA +LF M PS ++ LING
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILING 360
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+RL+EA + R P+ TY+ ++ +C + R A ++ EM G+ P+
Sbjct: 361 HCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY I+L L K G +EA+ + K M ++ EP + Y I+++ C +++ A ++
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAM-QESKIEPHICIYNILIQGMCNFGKLEAARELF 479
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ +G+ P + Y+ +I+ L E ++AC+ F++M+ G P ++ Q
Sbjct: 480 SNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRN 539
Query: 305 GMEETAVVLAQKI 317
G AV L +++
Sbjct: 540 GDPSNAVRLIEEM 552
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 1/285 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+D LCK + A+ VF+ M + +PD +Y+ L++G+ Q + +++ M
Sbjct: 284 FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMV 343
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF P V Y I+IN HC ++R +EA L EM + P + TL+ G R
Sbjct: 344 GKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQ 403
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G P++ TY+ ++ C +++A+R++ M++ I P+ Y+I++
Sbjct: 404 VAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILI 463
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G+ E A +F + K G +P+V TY +++ + A ++ +M G
Sbjct: 464 QGMCNFGKLEAARELFSNLFVK-GIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGC 522
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
LP Y+ I +A + +EM+ G F L
Sbjct: 523 LPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQML 567
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 114/231 (49%), Gaps = 3/231 (1%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR--LSEAL 135
P VV + ++ + K Y + L ++M+ +N +P+ + LIN L R + A
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
G+ K G +P T+ ++ C +I DA ++ DE+ K G P+ TY ++ L
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G T A + K+M K G +P V Y V+ C + + + AM + EM +G+ P
Sbjct: 187 CKIGHTTNALQLLKKMEEK-GCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
+ YS++++ C+ +L++A F++M+ + P F+ L L EGM
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGM 296
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 131/274 (47%), Gaps = 3/274 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
V A F+++ R P + + LL ++K+ ++ + ++M P+V + I
Sbjct: 50 VADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTI 109
Query: 86 MINAHCSAKR--YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
+IN C + R A +M +P+ F TL+NGL S+ ++ +A++ F + K
Sbjct: 110 LINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGK 169
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
GF P TY ++ C +A +++ +M + G P+ Y+ V+ L K R E
Sbjct: 170 MGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANE 229
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A F M + G P V TY ++ FC Q++ A ++ +M R V+P ++ L+
Sbjct: 230 AMYFFSEMVDQ-GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILV 288
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ LC E + +A + F+ M + G+ P +S L
Sbjct: 289 DGLCKEGMILEARRVFEMMTENGVEPDAYTYSAL 322
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N LI+ CKSR + A+ + +M R PD +Y+ L++G+ Q
Sbjct: 346 GFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVA 405
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++EM G PD ++Y I+++ C DEA L + M+ + +P I+ LI G
Sbjct: 406 QKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQG 465
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + +L A + F +G +P TY ++ N+A M +M G PN
Sbjct: 466 MCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPN 525
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ TY++ + ++ G A + + M + G ST+++++ +
Sbjct: 526 SCTYNVAIQGFLRNGDPSNAVRLIEEMVGR-GFSADSSTFQMLLDL 570
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GL + ++ L+D LCK H++ A + M++ + +P I Y IL++G
Sbjct: 412 MCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGK 471
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E++ + G +P VV+Y +MI+ +EA E+FR+M C P+ +
Sbjct: 472 LEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNV 531
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
I G S A++ + RGF ++ T+ ++
Sbjct: 532 AIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 3/175 (1%)
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P + T Y + DA +++ P ++ +L L+K S
Sbjct: 31 SPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVIS 90
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNA--QVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+ K+M P V T I++ C++ V A +M G+ P + TL+N
Sbjct: 91 LCKQMDLS-NIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLN 149
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
LC + K+ DA K F E+ +G P ++ + + L G A+ L +K+++
Sbjct: 150 GLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEE 204
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 145/282 (51%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + + LI++ C V A V K+ K PD ++T L+ G +
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +GF PDVV+YG +IN C A+ L M NC+P+ + T
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++++EA F + +G P+ TYN+++ A C +++EM
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ +++ V+ L K G+ EA+ V +M ++ G EP V TY ++ C +++D A
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR-GVEPNVVTYTALMDGHCLLSEMDEA 325
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++++D M +G +P + Y+TLIN C ++D A Y M
Sbjct: 326 VKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLM 367
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 159/330 (48%), Gaps = 23/330 (6%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD FN ++D LCK V A +V DKM +R +P++ +YT L++G + +
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYD-------------------EAVELFREME 107
V+ M G P+V+SY +IN +C +R D EAV++F M
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMV 387
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
C P+ + TLING +R+ +A+ FG+ ++ P+ TY+ ++ C R+
Sbjct: 388 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 447
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
DA + EM C PN TY I+L +L K EA ++ K + +P + I
Sbjct: 448 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAI-EGSNLDPDIQVNNIA 506
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ C +++ A ++ + ++G+ P + YS +IN LC LD+A K F+EM + G
Sbjct: 507 IDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGC 566
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
G +++ + + A+ L Q++
Sbjct: 567 TLNGCIYNTITRGFLRNNETSRAIQLLQEM 596
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
Query: 22 KSRH---VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
KS H ++ A F++M + + P + LL + K+ ++ + +M G P
Sbjct: 35 KSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP 94
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
++ + I+IN+ C R A + ++ +P F TLI G+ E ++ EAL F
Sbjct: 95 NIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLF 154
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+ GF P+ TY ++ C + A R++ M + PN Y+ ++ L K
Sbjct: 155 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
+ EA+++F M K G P + TY ++ C + + +EM ++P +
Sbjct: 215 RQVTEAFNLFSEMVTK-GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++T++++LC E K+ +A +M+ G+ P
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 1/239 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+D C +++ A +VFD M + P++ SY L+ G+ + + + ++ EM
Sbjct: 363 YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 422
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PD V+Y +I+ C +R +A+ LF EM A + P+ + L++ L + L+
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 482
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ + +P+ N + C + + A + + G+ P+ TY I++
Sbjct: 483 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 542
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L + G +EA +F+ M G Y + R F N + A+++ EM ARG
Sbjct: 543 NGLCRRGLLDEASKLFREMDEN-GCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 600
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P V + ++ + K + + L +M++ P+ + LIN R+ A
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ K G +P+ T+ ++ C +I +A + D+M G P+ TY +++ L K
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G T A + M +K +P V Y ++ C + QV A ++ EM +G+ P +
Sbjct: 179 VGNTSAAIRLLGSMVQK-NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF 237
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y++LI++LC+ + EM+D I P F+ + AL EG
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEG 285
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N LI+ CK + +++A +F +M ++ PD +Y+ L+ G + L
Sbjct: 390 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 449
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM P++V+Y I+++ C + EA+ L + +E +N P + I+G
Sbjct: 450 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 509
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L A F +G +P+ TY+ ++ C +++A ++ EM + G N
Sbjct: 510 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 569
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
Y+ + ++ T A + + M + G ST + V+M
Sbjct: 570 GCIYNTITRGFLRNNETSRAIQLLQEMVAR-GFSADASTMTLFVKML 615
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 12/185 (6%)
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ LS F S R F ++ +N + GA ++ M M+ P+T +
Sbjct: 16 QMLSLLPHFLSLSHNR-FHSKSLHFNTIDGAI-------SSFNRMLRMQP---PPSTVDF 64
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ +L + K S+ +M G P + T I++ FC+ +V A + ++
Sbjct: 65 NKLLTSIAKMKHHSTLLSLSHQMD-SFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
G P ++TLI +C E K+ +A F +M+ G RP + L L G
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 309 TAVVL 313
A+ L
Sbjct: 184 AAIRL 188
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 165/324 (50%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+D+ + ++ +N ++ TLC S +++A EV D+ ++ PD+ +YTIL+E ++
Sbjct: 207 LDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESG 266
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM++ G +PDVV+Y ++IN C R DEA++ M + C+P+
Sbjct: 267 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 326
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + S R +A + ++G P T+N ++ C + A ++++M G
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 386
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ +Y+ +LH K + + A M + G P + TY ++ C + +VD+A
Sbjct: 387 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR-GCYPDIVTYNTLLTALCKDGKVDVA 445
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I +++ ++G PV+ Y+T+I+ L K + A K EM G++P +S+L
Sbjct: 446 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 505
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG + A+ ++ L P
Sbjct: 506 LSREGKVDEAIKFFHDLEGLGIRP 529
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 163/326 (50%), Gaps = 9/326 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++ G ++ +N LI CKS ++ A +V D+M PD+ +Y +L
Sbjct: 175 LEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGK 231
Query: 61 LLSMNEVY-REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L EV R+++ + + PDV++Y I+I A C +A++L EM KP +
Sbjct: 232 LKQAMEVLDRQLQKECY-PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYN 290
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LING+ E RL EA++F G +P T+N ++ + C + R DA +++ +M +
Sbjct: 291 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 350
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ T++I+++ L + G A + ++M G P +Y ++ FC ++D
Sbjct: 351 GCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH-GCTPNSLSYNPLLHGFCKEKKMDR 409
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ D M +RG P + Y+TL+ +LC + K+D A + ++ G P ++ +
Sbjct: 410 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVID 469
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPL 325
L G E A+ L +D++R+ L
Sbjct: 470 GLSKVGKTERAIKL---LDEMRRKGL 492
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 153/323 (47%), Gaps = 7/323 (2%)
Query: 7 KQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+ ++PD LI C+ ++A V + +++ PD+ +Y +L+ G+ + + +
Sbjct: 143 RGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDN 202
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+V M PDVV+Y ++ C + + +A+E+ C P + LI
Sbjct: 203 ALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIE 259
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E + +A++ + + +G +P+ TYN ++ C R+++A + ++ M G P
Sbjct: 260 ATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP 319
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++I+L + GR +A + M RK G P+V T+ I++ C + A+ I
Sbjct: 320 NVITHNIILRSMCSTGRWMDAEKLLSDMLRK-GCSPSVVTFNILINFLCRQGLLGRAIDI 378
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++M G P Y+ L++ C E K+D A +Y M+ G P ++ L AL
Sbjct: 379 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK 438
Query: 304 EGMEETAVVLAQKIDKLRKTPLV 326
+G + AV + ++ +P++
Sbjct: 439 DGKVDVAVEILNQLSSKGCSPVL 461
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 164/355 (46%), Gaps = 39/355 (10%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG--- 54
+D+ K+ PD + LI+ CK V +A ++ D+M+ + PD+ +Y +L+ G
Sbjct: 239 LDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 298
Query: 55 ----------------WGQQKNLLSMNEVYREMKDDG----------------FEPDVVS 82
+G Q N+++ N + R M G P VV+
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ I+IN C A+++ +M C P+ + L++G EK++ A+++
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
RG P+ TYN ++ A C +++ A +++++ G P TY+ V+ L K G+TE
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
A + M RK G +P + TY +V +VD A++ + +++ G+ P Y+++
Sbjct: 479 RAIKLLDEMRRK-GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 537
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ LC + D A + M+ +P ++ L + + EG+ + A+ L ++
Sbjct: 538 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI+ LC+ + RA ++ +KM P+ SY LL G+ ++K
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E M G PD+V+Y ++ A C + D AVE+ ++ + C P + T
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + A++ + +++G +P+ TY+++V ++++A + ++ G
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ L K+ +T+ A M K +PT +TY I++ Y A
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR-CKPTEATYTILIEGIAYEGLAKEA 585
Query: 241 MRIWDEMKARGVL 253
+ + +E+ +RG++
Sbjct: 586 LDLLNELCSRGLV 598
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 160/315 (50%), Gaps = 4/315 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
DK K LP+ +N LID CK R ++ ++ M + +P++ SY +++ G ++
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ ++ V EM G+ D V+Y +I +C + +A+ + EM PS +
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI+ + ++ A++F Q + RG P TY +V + +N+AYR++ EM
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G P+ TY+ +++ G+ E+A +V + M K G P V +Y V+ FC + VD
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVD 467
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A+R+ EM +G+ P YS+LI C + + +AC ++EML +G+ P ++ L
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 299 QALRDEGMEETAVVL 313
A EG E A+ L
Sbjct: 528 NAYCMEGDLEKALQL 542
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 149/289 (51%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI C + +++ A +FDKM+ + P++ +Y L++G+ + + + ++ R M
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP+++SY ++IN C R E + EM + TLI G E
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL + + G P TY +++ + C + +N A +D+MR G+ PN RTY ++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G EAY V + M+ G P+V TY ++ C +++ A+ + ++MK +G+
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDN-GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + YST+++ C +D+A + +EM++ GI+P +S+L Q
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 156/313 (49%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ L +N +I+ LC+ ++ V +M +R + D +Y L++G+ ++ N
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G P V++Y +I++ C A + A+E +M P+ + TL++G
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDG 389
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++EA + + GF P TYNA++ +C + ++ DA ++++M++ G+ P+
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y VL ++ +EA V + M K G +P TY +++ FC + A ++
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+EM G+ P Y+ LIN+ C E L+ A + EM++ G+ P +S L L +
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 305 GMEETAVVLAQKI 317
A L K+
Sbjct: 569 SRTREAKRLLLKL 581
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 140/275 (50%), Gaps = 36/275 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LI ++CK+ ++ RA E D+M+ R P+ ++YT L++G+ Q+
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V REM D+GF P VV+Y +IN HC + ++A+ + +M+
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK------------- 442
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
EK LS P+ +Y+ V+ +C S +++A R+ EM + G
Sbjct: 443 -------EKGLS---------------PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T TY ++ + RT+EA +++ M R G P TY ++ +C ++ A
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-VGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+++ +EM +GVLP + YS LIN L + + +A
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 3/246 (1%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVE-LFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GF P V+SY +++A +KR E +F+EM + P+ + LI G +
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL F + + +G P TYN ++ YC +I+D ++++ M G+ PN +Y++V++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L + GR +E V M+R+ G TY +++ +C A+ + EM G+
Sbjct: 284 GLCREGRMKEVSFVLTEMNRR-GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVV 312
P + Y++LI+S+C ++ A ++ +M G+ P + ++ L +G M E V
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 313 LAQKID 318
L + D
Sbjct: 403 LREMND 408
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 16/265 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + ++ LI C+ R + A +++++M + PD +YT L+ + + +L
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI-- 122
+++ EM + G PDVV+Y ++IN R EA L ++ PS + TLI
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 123 -------------NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
G + ++EA Q F + +P+ YN ++ +C + I A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
Y + EM K G +T T ++ L K G+ E SV + R +++V
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEA-EQAKVLVE 718
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLP 254
+ +D+ + + EM G LP
Sbjct: 719 INHREGNMDVVLDVLAEMAKDGFLP 743
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 6/240 (2%)
Query: 92 SAKRYDE--AVELFREMEATN--CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
+AK D+ A +F+ ++ T C + +F ++ + +AL ++ GF
Sbjct: 107 AAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFM 166
Query: 148 PEAPTYNAVVGAYCWSMR-INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P +YNAV+ A S R I+ A + EM + + PN TY+I++ AG + A +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+F +M K G P V TY ++ +C ++D ++ M +G+ P + Y+ +IN L
Sbjct: 227 LFDKMETK-GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
C E ++ + EM G ++ L + EG A+V+ ++ + TP V
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 151/285 (52%), Gaps = 4/285 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ + +ID+LCK+ HV A +FD+M+ PD+ YT L+ G
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R M +PDV+++ +I+A ++ +A EL+ EM + P+ + +
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING E + EA Q F + +G P+ Y +++ +C +++DA ++ EM + G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ NT TY ++ + G+ A VF M + G P + TY +++ CYN +V A
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 241 MRIWDEMKAR---GVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ I+++M+ R GV P + Y+ L++ LC+ KL+ A F++M
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 164/319 (51%), Gaps = 2/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G++ ++ + L++ LC S A + M KR+ PD+ ++ L++ + ++
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+Y EM P++ +Y +IN C DEA ++F ME C P + +
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING K++ +A++ F + ++G TY ++ + + N A + M G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP--GTEPTVSTYEIVVRMFCYNAQVD 238
+ PN RTY+++LH L G+ ++A +F+ M ++ G P + TY +++ CYN +++
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A+ ++++M+ R + + Y+ +I +C K+ +A F + G++P ++ +
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 299 QALRDEGMEETAVVLAQKI 317
L EG++ A VL +K+
Sbjct: 503 SGLFREGLKHEAHVLFRKM 521
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 153/315 (48%), Gaps = 1/315 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L N L++ C+S A KM K F+PDI ++T L+ G+ +
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M + G +PDVV Y +I++ C + A+ LF +ME +P ++ +L+NG
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R +A KR +P+ T+NA++ A+ + DA + +EM + I PN
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ G +EA +F M K G P V Y ++ FC +VD AM+I+
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETK-GCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM +G+ Y+TLI K + A + F M+ G+ P + ++ L L
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 305 GMEETAVVLAQKIDK 319
G + A+++ + + K
Sbjct: 401 GKVKKALMIFEDMQK 415
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 141/302 (46%), Gaps = 1/302 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ DF +L++ + K + + + D ++ D+ + +L+ + Q +
Sbjct: 71 SIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFL 130
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M GFEPD+V++ +IN C R +EA+ + +M KP ++ T+I+ L
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ AL F Q + G P+ Y ++V C S R DA ++ M K I P+ T+
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ +K G+ +A ++ M R P + TY ++ FC VD A +++ M+
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMS-IAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+G P + Y++LIN C K+DDA K F EM G+ ++ L Q G
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 309 TA 310
A
Sbjct: 370 VA 371
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 100/211 (47%), Gaps = 6/211 (2%)
Query: 118 FCT----LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
FC L NGL S + +EAL F + P + ++ + + +
Sbjct: 37 FCNYREILRNGLHS-LQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLC 95
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
D ++ G+ + T +++++ ++ + A S +M K G EP + T+ ++ FC
Sbjct: 96 DHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKM-MKLGFEPDIVTFTSLINGFCL 154
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+++ AM + ++M G+ P + MY+T+I+SLC ++ A F +M + GIRP +
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+++L L + G A L + + K + P
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKP 245
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M + GL + LI + AQEVF M R P+I++Y +LL G+
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K L + E ++ + DG P++ +Y ++++ C + ++A+ +F +M
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +I G+ ++ A+ F +G +P TY ++ ++A+ + +M+
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Query: 178 KCGI 181
+ G+
Sbjct: 523 EDGV 526
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 151/322 (46%), Gaps = 15/322 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L +N +ID C S AQ + +M +R+ +P++ +Y+ L+ + +++
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERK 334
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y EM G P+ ++Y MI+ C R D A +F M C P F T
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNT 394
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G KR+ + + + + G + TYN ++ +C +N A + +M G
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRM 230
+ P+ T + +L L G+ ++A +FK M + G EP V TY I++
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISG 514
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A ++ EM RG++P YS++IN LC + +LD+A + F M P
Sbjct: 515 LINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPD 574
Query: 291 GQLFSNL-----KQALRDEGME 307
F+ L K D+G+E
Sbjct: 575 VVTFNTLVSGYCKAGRVDDGLE 596
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 163/318 (51%), Gaps = 6/318 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G + ++ F+ L+ LC V A ++F +M + P++ ++T L+ G ++
Sbjct: 138 ITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTFTTLMNGLCREGR 193
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFC 119
++ + M +DG +P+ ++YG +++ C A+ L R+ME ++ KP+ I+
Sbjct: 194 VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYS 253
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+GL + R S+A + + +++G P+ TYN ++ +C S R ++A R++ EM +
Sbjct: 254 AIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLER 313
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I PN TY +++ +K + EA ++ M + G P TY ++ FC ++D
Sbjct: 314 KINPNVVTYSALINAYVKERKFFEAEELYDEMLPR-GIIPNTITYNSMIDGFCKQNRLDA 372
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ M +G P + ++TLI+ C ++DD + EM + G+ ++ L
Sbjct: 373 AEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIH 432
Query: 300 ALRDEGMEETAVVLAQKI 317
G A+ L+Q++
Sbjct: 433 GFCLVGDLNAALDLSQQM 450
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 143/282 (50%), Gaps = 12/282 (4%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DFN+L+ + + + ++ KM++++ D+ S+ IL++ + L + ++
Sbjct: 79 DFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKI 138
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GF+PDVV++ +++ C R EA++LF +M C+P+ F TL+NGL E R+
Sbjct: 139 TKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRV 194
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK----CGIGPNTRT 187
EA+ + + G +P TY +V C +I D ++ +RK I PN
Sbjct: 195 VEAVALLDRMVEDGLQPNQITYGTIVDGMC---KIGDTVSALNLLRKMEEMSHIKPNVVI 251
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ L K GR +A++++ M K G P + TY ++ FC + + A R+ EM
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEK-GIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
R + P + YS LIN+ E K +A + + EML GI P
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIP 352
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 12/288 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID CK ++ A+ +F M + PD+ ++ L++G+ K + E+ EM
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT 416
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G D +Y +I+ C + A++L ++M ++ P TL++GL +L
Sbjct: 417 ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 476
Query: 133 EALQFFGQSKK-----------RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+AL+ F +K G EP+ TYN ++ + +A + EM GI
Sbjct: 477 DALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGI 536
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PNT TY +++ L K R +EA +F M K + P V T+ +V +C +VD +
Sbjct: 537 VPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFS-PDVVTFNTLVSGYCKAGRVDDGL 595
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ EM RG++ Y TLI+ ++ A FQEM+ G+ P
Sbjct: 596 ELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYP 643
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 4/277 (1%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ +E A ++F M + R P + + L+ + + + +Y++M+ DV S+
Sbjct: 56 KGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSF 115
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+I CS + A+ F ++ +P F TL++GL E R+SEAL F Q +
Sbjct: 116 NILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR 175
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P T+ ++ C R+ +A ++D M + G+ PN TY ++ + K G T
Sbjct: 176 ----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVS 231
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++ ++M +P V Y ++ + + A ++ EM+ +G+ P + Y+ +I
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMI 291
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ C + +A + QEML+ I P +S L A
Sbjct: 292 DGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINA 328
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 123/259 (47%), Gaps = 12/259 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M + GL + +N LI C + A ++ +M PDI + LL+G G+
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474
Query: 58 QKNLLSMNEVYREMKDD--------GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
K+ L M + ++ K D G EPDV +Y I+I+ + ++ EA EL++EM
Sbjct: 475 LKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHR 534
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
P+ + ++INGL + RL EA Q F + F P+ T+N +V YC + R++D
Sbjct: 535 GIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDG 594
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ EM + GI + TY ++H K G A +F+ M G P T ++
Sbjct: 595 LELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMI-SSGVYPDTITIRSMLT 653
Query: 230 MFCYNAQVDMAMRIWDEMK 248
+ ++ A+ + ++++
Sbjct: 654 VLWSKEELKRAVAMLEDLQ 672
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 91/200 (45%), Gaps = 5/200 (2%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L +G K L +A+ F + P +N ++G R + + +M +
Sbjct: 48 LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + +++I++ + A S F +++ K G +P V T+ ++ C +V A
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKIT-KLGFQPDVVTFSTLLHGLCVEDRVSEA 166
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ +M P + ++TL+N LC E ++ +A M++ G++P + +
Sbjct: 167 LDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 222
Query: 301 LRDEGMEETAVVLAQKIDKL 320
+ G +A+ L +K++++
Sbjct: 223 MCKIGDTVSALNLLRKMEEM 242
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 163/324 (50%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G +L + LID LC + +E A+E+F KMK PD Y LL+ + +
Sbjct: 288 MDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGD 347
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E + +M+ DG+ PDVV++ I+++ C A+ +DEA F M P+ H + T
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL R+ +AL+ + G +P A TY + + S A ++M+ G
Sbjct: 408 LICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKG 467
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + L+ L + GR EA ++F + R+ G P TY ++++ + QVD A
Sbjct: 468 IVPNIVACNASLYSLAEMGRLREAKTMFNGL-RENGLAPDSVTYNMMMKCYSKVGQVDEA 526
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + EM G P + + ++LI+SL ++D+A + F M D+ + P ++ L
Sbjct: 527 VNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSG 586
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG + A+ L + + + +P
Sbjct: 587 LGKEGRVQKAIELFESMIXKKCSP 610
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 165/341 (48%), Gaps = 17/341 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK L ++ L+ L K R E + +M+ P++ ++TI + G+ +
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA 281
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++R M D+G PD+V+Y ++I+A C+A + + A ELF +M+A KP I+ TL++
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK 341
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +F+ Q + G+ P+ T+ +V C + ++A+ D MRK GI PN
Sbjct: 342 FNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPN 401
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L++AGR E+A + M G +PT TY + F + + A+ +
Sbjct: 402 LHTYNTLICGLLRAGRIEDALKLLDTM-ESVGVQPTAYTYITFIDYFGKSGETGKAVETF 460
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--------- 295
++MKA+G++P + + + SL +L +A F + + G+ P ++
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520
Query: 296 -------NLKQALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
NL + G E +V+ ID L K VD
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 147/296 (49%), Gaps = 2/296 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
L+ LCK + A ++FDK KK P + SY L+ + +++++MK+
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G PD ++ +++ H + + E EL++EM + CKP + +I+ L L +A
Sbjct: 818 GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L FF F P TY ++ R+ +A R+ +EM G PN ++I+++
Sbjct: 878 LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K G TE A +FKRM + G P + +Y I+V C +VD A+ ++E+K+ G+ P
Sbjct: 938 YGKIGDTETACQLFKRMVNE-GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
Y+ +IN L ++++A + EM + GI P +++L L GM E A
Sbjct: 997 DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 152/287 (52%), Gaps = 1/287 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+ L +N LI L + + E+A ++F MK PD ++ +LL G+ +
Sbjct: 781 KLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKIT 840
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ E+Y+EM +PD ++Y I+I++ + D+A++ F ++ +++ +P+P + LI
Sbjct: 841 ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL RL EA++ F + G +P +N ++ Y A ++ M GI
Sbjct: 901 DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ ++Y I++ L AGR +EA F + + G +P Y ++ + +++ A+
Sbjct: 961 PDLKSYTILVDCLCLAGRVDEALYYFNEL-KSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+++EM+ RG++P ++ Y++L+ +L ++ A + ++E+ G+ P
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEP 1066
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + FN L+ KS + E++ +M RR PD +Y I++ + N
Sbjct: 814 MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNN 873
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + ++ F P +YG +I+ R +EA+ LF EM CKP+ IF
Sbjct: 874 LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING G A Q F + G P+ +Y +V C + R+++A +E++ G
Sbjct: 934 LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ Y+ +++ L K+ R EEA +++ M R G P + TY ++ V+ A
Sbjct: 994 LDPDFIAYNRIINGLGKSQRMEEALALYNEM-RNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R+++E++ G+ P + Y+ LI + + A ++ M+ G P ++ L
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 141/338 (41%), Gaps = 34/338 (10%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +++ L VE VF+ M+K+ D+ +Y + + + L M V +M+
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRK 185
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GF + SY +I+ + EA+E++R M + KPS + L+ LG ++
Sbjct: 186 AGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ + + G P T+ + + +I++AY + M G GP+ TY +++
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305
Query: 194 HLIKAGRTEEAYSVFKRM---SRKP-------------------------------GTEP 219
L AG+ E A +F +M KP G P
Sbjct: 306 ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMP 365
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V T+ I+V + C D A +D M+ +G+LP +H Y+TLI L +++DA K
Sbjct: 366 DVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLL 425
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
M +G++P + G AV +K+
Sbjct: 426 DTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKM 463
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 137/282 (48%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ L +N LI L ++ +E A ++ D M+ P +Y ++ +G+
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E + +MK G P++V+ + + R EA +F + P +
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ ++ EA+ + + G EP+ N+++ + + R+++A++M D M+
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ +L L K GR ++A +F+ M K + T+S + ++ FC N +V++A
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTIS-FNTLLDCFCKNDEVELA 631
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++++ +M P + Y+T+I L E+K++ A +F ++
Sbjct: 632 LKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL 673
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + ID KS +A E F+KMK + P+I + L +
Sbjct: 428 MESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ ++++G PD V+Y +M+ + + DEAV L EM C+P + +
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ EA Q F + K P TYN ++ R+ A + + M
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK 607
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT +++ +L K E A +F +M+ +P V TY V+ +V+ A
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD-CKPDVLTYNTVIYGLIKENKVNHA 666
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE-MLDIGIRPPGQLFSNLKQ 299
+ ++K + + P TL+ L ++ DA ++ M + R + +L
Sbjct: 667 FWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMG 725
Query: 300 ALRDEGMEETAVVLAQKI 317
E + A++ A+++
Sbjct: 726 GTLVEAEMDKAIIFAEEL 743
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 143/342 (41%), Gaps = 39/342 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+D CK+ VE A ++F KM PD+ +Y ++ G ++ + + ++K
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK 674
Query: 73 DD---------GFEPDVVSYGIMINAHCSAKRY--------------------------D 97
P +V G + +A A+ + D
Sbjct: 675 KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMD 734
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAV 156
+A+ E+ L+ L KR A Q F + +KK G P +YN +
Sbjct: 735 KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKP 215
+G A+ + +M+ G P+ T++++L K+G+ E + ++K M SR+
Sbjct: 795 IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR- 853
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+P TY IV+ + +D A+ + ++ + P Y LI+ L +L++A
Sbjct: 854 -CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEA 912
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ F+EM D G +P +F+ L G ETA L +++
Sbjct: 913 MRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +NR+I+ L KS+ +E A ++++M+ R PD+ +Y L+ G +
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+Y E++ G EPDV +Y +I + ++ + A +++ M C P+ + L N
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 155/286 (54%), Gaps = 5/286 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ TLC+ + + A+ V+ ++KK F P+++++ ILL GW Q + + EM+
Sbjct: 179 FNALLRTLCQEKSMTDARNVYHRLKKE-FKPNLQTFNILLSGWKQSE---EAELFFEEMR 234
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G +PDVVSY +I+ +C + ++A ++ +M + P + ++I GLG +
Sbjct: 235 ELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGLGLVGQPD 294
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + K+ G P+ YNAV+ YC + R+ DA +MDEM G+ PN TY++
Sbjct: 295 KARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFF 354
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ ++S+++RM + G P + ++R+F + +V+MA+ +W++M +G
Sbjct: 355 RVFYWSNDLRNSWSLYRRM-MESGCLPNTQSCMFLIRLFRKHEKVEMALTLWNDMVEKGF 413
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
+ + L + LC KL +A K F +M++ G +P F +K
Sbjct: 414 GSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNVSFRRIK 459
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 159/311 (51%), Gaps = 1/311 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
+ LI LC A V D+M +RR PD+ +YTILLE ++ ++ EM+D
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 223
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G PD+V+Y +++N C R D+A+E + + + C+P+ + ++ GL + +R +
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + G+ ++G P T+N ++ C + A +++++ K G PN+ +Y+ +LH
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
K + ++A + M + G P + +Y ++ C + +VD+A+ + ++K +G
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSR-GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 402
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
PV+ Y+T+I+ L K +A + EM+ G++P +S + L E E A+
Sbjct: 403 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 462
Query: 314 AQKIDKLRKTP 324
K+ + P
Sbjct: 463 FGKVQDMGIRP 473
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 163/348 (46%), Gaps = 39/348 (11%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D+ ++ +PD + L++ CK ++A ++ D+M+ + PDI +Y +++ G Q
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS--- 114
+ + E + + G EP+ VSY I++ C+A+R+++A EL EM C P+
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302
Query: 115 ------------------------PHIFCT--------LINGLGSEKRLSEALQFFGQSK 142
P C+ L++ +K++ +A+ F
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
RG P+ +YN ++ A C S ++ A ++ +++ G P +Y+ V+ L KAG+T+
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 422
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA + M K G +P + TY + C +++ A+R + +++ G+ P +Y+ +
Sbjct: 423 EALELLNEMVSK-GLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 481
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
I LC + A F M+ G P ++ L + L EG+ + A
Sbjct: 482 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 529
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 139/297 (46%), Gaps = 16/297 (5%)
Query: 21 CKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDV 80
C R VER D + + L G G+ N L+ V EM PDV
Sbjct: 151 CAERAVERDAYTCDTLIRG------------LCGRGRTANALA---VLDEMLRRRCVPDV 195
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
V+Y I++ A C Y +A++L EM C P + ++NG+ E R+ +A++F
Sbjct: 196 VTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKN 255
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
G EP +YN V+ C + R DA +M EM + G PN T+++++ L + G
Sbjct: 256 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 315
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
E A V +++ K G P +Y ++ FC ++D AM D M +RG P + Y+
Sbjct: 316 VEPALEVLEQIP-KYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 374
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
TL+ +LC ++D A + ++ D G P ++ + L G + A+ L ++
Sbjct: 375 TLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 431
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI LC+ VE A EV +++ K P+ SY LL + +QK
Sbjct: 291 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKK 350
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G PD+VSY ++ A C + D AVEL +++ C P + T
Sbjct: 351 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 410
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + EAL+ + +G +P+ TY+ + C RI DA R +++ G
Sbjct: 411 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 470
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PNT Y+ ++ L K T A +F M G P STY I++ Y + A
Sbjct: 471 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN-GCMPNESTYTILIEGLAYEGLIKEA 529
Query: 241 MRIWDEMKARG 251
+ DE+ +RG
Sbjct: 530 RDLLDELCSRG 540
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 117/281 (41%), Gaps = 33/281 (11%)
Query: 78 PDVVSYGIMINAHCSAKRYD--------------------------------EAVELFRE 105
PDV++Y M+ +C A + D A+ + E
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDE 185
Query: 106 MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
M C P + L+ +A++ + + +G P+ TYN VV C R
Sbjct: 186 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 245
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++DA + + G PNT +Y+IVL L A R E+A + M +K G P V T+
Sbjct: 246 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK-GCPPNVVTFN 304
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+++ C V+ A+ + +++ G P Y+ L+++ C + K+D A + M+
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
G P ++ L AL G + AV L ++ P++
Sbjct: 365 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 405
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 145/282 (51%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ N LI++ C + A V K+ K PD ++T L+ G +
Sbjct: 95 MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +GF+P+VV+YG +IN C + A+ L R ME NC+P ++ +
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++++EA F + +G P+ TY +++ + C ++++M
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + V+ L K G+ EA+ V M + G EP V TY ++ C +++D A
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR-GVEPNVVTYNALMDGHCLQSEMDEA 333
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++++D M G P + Y+TLIN C ++D A F+EM
Sbjct: 334 VKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEM 375
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 158/352 (44%), Gaps = 37/352 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M++ + ++ + +ID+LCK R V A +F KM + PDI +YT L+
Sbjct: 200 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 259
Query: 55 WGQQKNLLSM-----------------------------NEVYREMKDDGFEPDVVSYGI 85
W LL+ ++V M G EP+VV+Y
Sbjct: 260 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 319
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+++ HC DEAV++F M P+ + TLING +R+ +A F + ++
Sbjct: 320 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 379
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P TYN ++ C R+ DA + EM G P+ TY I+L +L K +EA
Sbjct: 380 LIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 438
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ K + +P + Y IV+ C +++ A I+ + ++G+ P + Y+ +IN
Sbjct: 439 ALLKTI-EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMING 497
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
LC LD+A K F EM G P G ++ + Q L A+ L Q++
Sbjct: 498 LCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 549
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 147/304 (48%), Gaps = 5/304 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD F+ ++D LCK + A +V D M R +P++ +Y L++G Q + +
Sbjct: 276 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVK 335
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ M +G+ P+V+SY +IN +C +R D+A LF EM P+ + TL++
Sbjct: 336 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC- 394
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL +A+ F + G P+ TY ++ C +++A ++ + + P+ +
Sbjct: 395 HVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 454
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y IV+ + +AG E A +F +S K G P V TY I++ C +D A +++ E
Sbjct: 455 IYTIVIDGMCRAGELEAARDIFSNLSSK-GLRPNVRTYTIMINGLCRRGLLDEANKLFME 513
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G P Y+T+ L + A + QEML G + L + L D+ +
Sbjct: 514 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKL 573
Query: 307 EETA 310
+++
Sbjct: 574 DQSV 577
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F++M P + LL + K ++ + +M G PDV + I
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN+ C R A + ++ +P F TLI GL E ++ +AL F + G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+P TY ++ C N A R++ M + P+ Y ++ L K + EA+
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++F +M + G P + TY ++ C + + ++M ++P + ++ST++++
Sbjct: 230 NLFSKMVGQ-GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDA 288
Query: 266 LCHEDKLDDACKYFQEMLDIGIRP 289
LC E K+ +A M+ G+ P
Sbjct: 289 LCKEGKITEAHDVVDMMIIRGVEP 312
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 11/273 (4%)
Query: 33 FDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCS 92
F + RF ++ L + +L M+ P V + ++ +
Sbjct: 32 FSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHP----------PPSTVDFNRLLTSIAK 81
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
K+Y L +M++ P + LIN RL A + K G +P+ T
Sbjct: 82 TKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTAT 141
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
+ ++ C +I DA + D+M G PN TY +++ L K G T A + + M
Sbjct: 142 FTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 201
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
+ +P V Y ++ C + QV A ++ +M +G+ P + Y++LI+SLC+ +
Sbjct: 202 QG-NCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 260
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+M++ I P +FS + AL EG
Sbjct: 261 KHVTTLLNQMINSKIMPDVVIFSTVVDALCKEG 293
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 6/230 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW--GQQKNLL 62
G + +N LI+ CK + +++A +F++M ++ P+ +Y L+ G+ ++ +
Sbjct: 344 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAI 403
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ + EM G PD+ +Y I+++ C DEA+ L + +E +N P I+ +I
Sbjct: 404 AL---FHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVI 460
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G+ L A F +G P TY ++ C +++A ++ EM G
Sbjct: 461 DGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCS 520
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
P+ TY+ + L++ A + + M + G VST ++V M C
Sbjct: 521 PDGCTYNTITQGLLQNKEALRAIQLLQEMLAR-GFSADVSTTTLLVEMLC 569
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++DA + M P+T ++ +L + K + +S+ +M G P V T
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSF-GIPPDVYTLN 108
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
I++ FC+ ++ A + ++ G P ++TLI LC E K+ DA F +M+
Sbjct: 109 ILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 168
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
G +P + L L G A+ L + +++
Sbjct: 169 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQ 202
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + + +I+ LC+ ++ A ++F +M PD +Y + +G Q K L
Sbjct: 483 GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRA 542
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
++ +EM GF DV + +++ C K D++V+
Sbjct: 543 IQLLQEMLARGFSADVSTTTLLVEMLCDDK-LDQSVK 578
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 4/301 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + FN ++D LCK+ ERA + M +R P +Y L+ G +Q+N+
Sbjct: 40 GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 99
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ E GF PDVV+Y I+ + C R DEA EL +EM C P+ + TLI+G
Sbjct: 100 KTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDG 159
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +A + GF P+ TY +V C R++ A +M++ M K G P+
Sbjct: 160 LCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 219
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L + GR +EA+ +FK M K T ++ Y +V +C +++ A ++
Sbjct: 220 VITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALA-YVSLVNGYCKSSRTKEAQKVV 278
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D ++ P + +Y+ L++ C E +LD+ F++M G P + ++ + L
Sbjct: 279 DGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKH 335
Query: 305 G 305
G
Sbjct: 336 G 336
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 146/292 (50%), Gaps = 4/292 (1%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M +R+ PD+ +Y IL++G + +E+ EM D G PD V++ +++ C A +
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
++ A L M NC+PS + TLI+GL ++ + A + GF P+ TY+
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
+ C RI++A+ ++ EM G PN TY+ ++ L KA +TE+AY + + +
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLV-SS 179
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P V TY I+V C ++D A+++ + M RG P + Y+ L+ LC ++D+A
Sbjct: 180 GFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA 239
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
F+EM+ + +L + A + +D +R TP +D
Sbjct: 240 HHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA---QKVVDGIRGTPYID 288
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 164/338 (48%), Gaps = 34/338 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LCK ++V+RA+ + D+ F PD+ +Y+IL +G ++ + E+ +EM
Sbjct: 83 YNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 142
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G P++V+Y +I+ C A + ++A EL + ++ P + +++GL E RL
Sbjct: 143 GNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLD 202
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKC----------- 179
+AL+ KRG P TY A++ C + R+++A+ + EM + C
Sbjct: 203 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 262
Query: 180 -GIGPNTRT------------------YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
G ++RT Y+ ++ K GR +E +VF+ M+ + G P
Sbjct: 263 NGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR-GCVPN 321
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
+ TY IV+ C + +VD A + M + G +P + Y+ +I+ L K +A +
Sbjct: 322 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 381
Query: 281 EMLDIGIRPPGQLFSNL-KQALRDEGMEETAVVLAQKI 317
+M+ GI P ++ L Q ++E ++ +L I
Sbjct: 382 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI 419
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 3/270 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L++ CKS + AQ+V D + R P I Y L++G+ ++ L + V+ +M
Sbjct: 258 YVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMA 314
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P++ +Y I+++ C + DEA M + C P + +I+GL +
Sbjct: 315 CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPK 374
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA Q Q + G P+A TYN ++ +C R +DA ++ M K G+ P+ TY+ ++
Sbjct: 375 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 434
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + R +AY + M R +TY ++ C + A+ + D M GV
Sbjct: 435 SGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGV 494
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
Y+ I+ LC E +LD+A EM
Sbjct: 495 EANTVTYNIFIDRLCKEGRLDEASSLLSEM 524
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 156/368 (42%), Gaps = 42/368 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N ++D LCK V+ A + M PD+ SY I+++G +
Sbjct: 317 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 376
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V +M G PD V+Y ++ C +R+D+AV + + M P + TLI+G
Sbjct: 377 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 436
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEA-PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L RL +A + + + G A TYN ++ C + A +MD M G+
Sbjct: 437 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 496
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVF--------------------------------KRM 211
NT TY+I + L K GR +EA S+ + M
Sbjct: 497 NTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREM 556
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
G T T+ +++ F ++D A+ + + M RG P + Y+ +I LC DK
Sbjct: 557 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDK 616
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ-------KID--KLRK 322
+D A + F EM GI ++ L L +G + A+ + + +ID K RK
Sbjct: 617 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRK 676
Query: 323 TPLVDRGQ 330
L RGQ
Sbjct: 677 LYLALRGQ 684
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 149/351 (42%), Gaps = 35/351 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N +ID L K+ + A++V D+M + PD +Y L+ + +++
Sbjct: 348 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP-HIFC 119
+ + M G +PD V+Y +I+ R +A EL EM C S +
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+I+ L E L +AL G E TYN + C R+++A ++ EM
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 527
Query: 180 ---------------------------------GIGPNTRTYDIVLHHLIKAGRTEEAYS 206
G+ + T+++++ K R +EA +
Sbjct: 528 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 587
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ + M ++ G P+V TY +V+ C +VD A ++DEM RG++ Y+ LI L
Sbjct: 588 LLELMVQR-GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 646
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
C + + +A + +EM L ALR +G E A L +++
Sbjct: 647 CGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 158/311 (50%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + + ++ +ID+ K R V A ++F MK + PDI +Y L++G
Sbjct: 229 MEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQ 288
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM+ PD+V++ ++++ C + EA + + M +P + +
Sbjct: 289 WKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSS 348
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ G + EA + F +G +P+ +YN ++ YC RI++A ++ +EM G
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN +Y+ ++H L + G EA ++FK M G P + TY I++ FC A
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTN-GNLPNLFTYSILLDGFCKQGYFGKA 467
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ M++ P + MY+ LI+++C L DA K F E+ G++P Q+++ +
Sbjct: 468 FRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIING 527
Query: 301 LRDEGMEETAV 311
L EG+ + A+
Sbjct: 528 LCKEGLLDEAL 538
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 150/305 (49%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL + + LI+ + V+ A V K+ K P I ++T L+ +
Sbjct: 124 MELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGK 183
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E++ +M G PDV +Y +IN C A L ++ME C+P+ + T
Sbjct: 184 FAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYST 243
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ ++R++EAL F K +G P+ TYN+++ C + +A +++EMR
Sbjct: 244 IIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLN 303
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ T+++++ + K G+ EA V K M+ G EP V TY ++ + ++V A
Sbjct: 304 IMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEM-GVEPDVVTYSSLMYGYSLRSEVVEA 362
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++D M +G P + Y+ LIN C ++D+A + F EM+ G+ P ++ L
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422
Query: 301 LRDEG 305
L G
Sbjct: 423 LCQLG 427
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 145/293 (49%), Gaps = 2/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N LI LC + A + ++M+ PDI ++ +L++ ++ +
Sbjct: 268 GISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEA 327
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V + M + G EPDVV+Y ++ + EA +LF M CKP + LING
Sbjct: 328 QGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILING 387
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
KR+ EA Q F + +G P +YN ++ C + +A + M G PN
Sbjct: 388 YCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPN 447
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+L K G +A+ +F+ M + ++P + Y I++ C + + A +++
Sbjct: 448 LFTYSILLDGFCKQGYFGKAFRLFRAM-QSTYSKPNLVMYNILIDAMCKSGNLRDARKLF 506
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
E+ +G+ P +Y+T+IN LC E LD+A + F+ M + G PP ++ N+
Sbjct: 507 SELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGC-PPDEISYNV 558
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + ++ FN L+DT+CK V AQ V M + +PD+ +Y+ L+ G+ +
Sbjct: 299 MRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSE 358
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +++ M G +PDV SY I+IN +C KR DEA +LF EM P+ + T
Sbjct: 359 VVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNT 418
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L EA F G P TY+ ++ +C A+R+ M+
Sbjct: 419 LIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTY 478
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN Y+I++ + K+G +A +F + K G +P Y ++ C +D A
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK-GLQPNAQIYTTIINGLCKEGLLDEA 537
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+ + M+ G P Y+ +I H A + EM D G
Sbjct: 538 LEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 142/295 (48%), Gaps = 8/295 (2%)
Query: 18 DTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG---WGQQKNLLSMNEVYREMKDD 74
D C R+++ A F+ M R+ P I +T LL GQ + ++ + ++M+
Sbjct: 70 DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYD--TVISLTKQMELA 127
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G P++ + I+IN +R D A + ++ +P+ F TLIN L + ++A
Sbjct: 128 GLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQA 187
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
++ F RG P+ TY ++ C A ++ +M + G PN TY ++
Sbjct: 188 MELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDS 247
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K R EA +F M K G P + TY +++ C +Q A + +EM++ ++P
Sbjct: 248 HRKDRRVNEALDIFSYMKVK-GISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMP 306
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDEGME 307
+ ++ L++++C E K+ +A + M ++G+ P +S+L +LR E +E
Sbjct: 307 DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVE 361
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
L ++ L+D CK + +A +F M+ P++ Y IL++ + NL +++
Sbjct: 447 NLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLF 506
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
E+ G +P+ Y +IN C DEA+E FR ME C P + +I G
Sbjct: 507 SELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHH 566
Query: 129 KRLSEALQFFGQSKKRGFEPEAPT 152
K S A+Q G+ + +GF + T
Sbjct: 567 KDESRAVQLIGEMRDKGFIADVGT 590
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 108/237 (45%), Gaps = 6/237 (2%)
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSE-ALQFFGQSKKRGFE 147
CS + D+A+ F M + KP P I F L++ + + + + Q + G
Sbjct: 73 CSFRNIDDALASFNHM--LHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLS 130
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P T + ++ + R++ A+ ++ ++ K G+ P T+ +++ L K G+ +A +
Sbjct: 131 PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMEL 190
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
F M + G P V TY ++ C + A + +M+ G P + YST+I+S
Sbjct: 191 FDDMVAR-GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ ++++A F M GI P +++L Q L + + A L ++ L P
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMP 306
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%)
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C I+DA + M P + +L ++K G+ + + G P
Sbjct: 73 CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
+ T I++ F + +VD+A + ++ G+ P + ++TLIN LC K A + F
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+M+ G RP ++ + L G A L +K+++ P V
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNV 238
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + +I+ LCK ++ A E F M++ PD SY +++ G+ K+
Sbjct: 513 GLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRA 572
Query: 65 NEVYREMKDDGFEPDV 80
++ EM+D GF DV
Sbjct: 573 VQLIGEMRDKGFIADV 588
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 147/278 (52%), Gaps = 1/278 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI TLCK VE A E+ + + PD+ ++ L++G +N E++ EM+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD +Y ++I++ CS + DEA+ + ++ME + C S + TLI+G +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + + G + TYN ++ C S R+ DA ++MD+M G P+ TY+ +L
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H + G ++A + + M+ G EP + TY ++ C +V++A ++ ++ +G+
Sbjct: 548 THFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
H Y+ +I L + K +A F+EML+ PP
Sbjct: 607 NLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 148/283 (52%), Gaps = 2/283 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G+K ++ FN LI LC++ + A + + M PD K++T +++G+ ++ +
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC-KPSPHIFC 119
L + +M + G VS ++++ C R ++A+ +EM + P + F
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TL+NGL + A++ + G++P+ TYN+V+ C + +A ++D+M
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
PNT TY+ ++ L K + EEA + + ++ K G P V T+ +++ C +
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFNSLIQGLCLTRNHRV 418
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
AM +++EM+++G P Y+ LI+SLC + KLD+A ++M
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +I LCK V+ A EV D+M R P+ +Y L+ ++ +
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ R + G PDV ++ +I C + + A+ELF EM + C+P + LI+
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L S+ +L EAL Q + G TYN ++ +C + + +A + DEM G+ N
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY+ ++ L K+ R E+A + +M + G +P TY ++ FC + A I
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIME-GQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M + G P + Y TLI+ LC +++ A K + + GI ++ + Q L
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 145/311 (46%), Gaps = 4/311 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
PD FN L++ LCK+ HV+ A E+ D M + +DPD+ +Y ++ G + + E
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V +M P+ V+Y +I+ C + +EA EL R + + P F +LI GL
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ A++ F + + +G EP+ TYN ++ + C ++++A M+ +M G +
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI 471
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++ KA +T EA +F M G TY ++ C + +V+ A ++ D+
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G P + Y++L+ C + A Q M G P + L L G
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 307 EETAVVLAQKI 317
E A L + I
Sbjct: 591 VEVASKLLRSI 601
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 146/298 (48%), Gaps = 2/298 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQK 59
M +FG N ++ CK VE A +M + F PD ++ L+ G +
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
++ E+ M +G++PDV +Y +I+ C EAVE+ +M +C P+ +
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TLI+ L E ++ EA + +G P+ T+N+++ C + A + +EMR
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ TY++++ L G+ +EA ++ K+M G +V TY ++ FC +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLIDGFCKANKTRE 488
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A I+DEM+ GV Y+TLI+ LC +++DA + +M+ G +P +++L
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 137/323 (42%), Gaps = 14/323 (4%)
Query: 4 FGLKQELPDFN-------RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWG 56
F L + P+F+ ++ L +S + +++ + MK R + ++ IL+E +
Sbjct: 70 FNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYA 129
Query: 57 Q---QKNLLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
Q Q +LS V M D+ G +PD Y M+N +M K
Sbjct: 130 QFELQDEILS---VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIK 186
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P F LI L +L A+ G P+ T+ V+ Y ++ A R+
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
++M + G + + ++++H K GR E+A + + MS + G P T+ +V C
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
V A+ I D M G P ++ Y+++I+ LC ++ +A + +M+ P
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 293 LFSNLKQALRDEGMEETAVVLAQ 315
++ L L E E A LA+
Sbjct: 367 TYNTLISTLCKENQVEEATELAR 389
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 4/264 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID+LC ++ A + +M+ + +Y L++G+ + E++ EM+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + V+Y +I+ C ++R ++A +L +M KP + + +L+ +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A G EP+ TY ++ C + R+ A +++ ++ GI Y+ V+
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVI 617
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY-NAQVDMAMRIWDEMKARG 251
L + +T EA ++F+ M + P +Y IV R C + A+ E+ +G
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677
Query: 252 VLP---VMHMYSTLINSLCHEDKL 272
+P ++M + + +L E+ L
Sbjct: 678 FVPEFSSLYMLAEGLLTLSMEETL 701
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + +N LID LCKSR VE A ++ D+M PD +Y LL + + +
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGD 555
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + M +G EPD+V+YG +I+ C A R + A +L R ++ +PH +
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615
Query: 121 LINGLGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYC-WSMRINDAYRMMDEMRK 178
+I GL +++ +EA+ F + ++ P+A +Y V C I +A + E+ +
Sbjct: 616 VIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Query: 179 CGIGP 183
G P
Sbjct: 676 KGFVP 680
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 5/188 (2%)
Query: 121 LINGLGSEKRLSEALQFFG-QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-- 177
L++ L S+ S AL+ F SKK F PE Y ++ S +D +++++M+
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+C +G T T+ I++ + +E SV M + G +P Y ++ + +
Sbjct: 113 RCEMG--TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL 170
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ +M G+ P + ++ LI +LC +L A ++M G+ P + F+ +
Sbjct: 171 KLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
Query: 298 KQALRDEG 305
Q +EG
Sbjct: 231 MQGYIEEG 238
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 161/318 (50%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+FG+K + D ++L+ LCK +HV++AQ++F + K RF K+Y+IL+ GWG+ +
Sbjct: 173 MDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQ-AKNRFSLTAKTYSILISGWGEIGD 231
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++++ M + G D+++Y ++ A C R DEA +F +M + +P +
Sbjct: 232 SEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSI 291
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I+ + A + + ++ P TYN ++ C + + +AY+++DEM G
Sbjct: 292 FIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRG 351
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T +Y+ + + A + RM K P TY +V+++ + D
Sbjct: 352 VKPDTWSYNAIQAYHCDHCEVNRALRLMFRM-EKDICLPDRHTYNMVLKLLIRIGRFDKV 410
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W+ M + P + YS +I+ C + KL++ACKYF+ M+D GI P L+
Sbjct: 411 TEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRN 470
Query: 300 ALRDEGMEETAVVLAQKI 317
L G + +LA K+
Sbjct: 471 RLLGLGFIDHIEILAAKM 488
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 3/250 (1%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEA 99
F + S+ IL+E G K + + EM++ +E + + ++ A+ A D A
Sbjct: 107 FQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGA 166
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ F M+ KP+ H L+ L K + +A Q F Q+K R F A TY+ ++
Sbjct: 167 IRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNR-FSLTAKTYSILISG 225
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+ A + M + G + Y+ +L L K GR +EA ++F M K EP
Sbjct: 226 WGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSK-RVEP 284
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
TY I + +C V A R+ D+M+ +LP + Y+ +I LC + +++A +
Sbjct: 285 DAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLL 344
Query: 280 QEMLDIGIRP 289
EM+ G++P
Sbjct: 345 DEMISRGVKP 354
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 6/210 (2%)
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKK-RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
F L+ LGS K+ + F + ++ +E + + + AY + + A R + M
Sbjct: 114 FHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRM 173
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G+ P D +L L K ++A +F + + T TY I++ +
Sbjct: 174 DEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSL--TAKTYSILISGWGEIGD 231
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+ A ++ M +G + Y+ L+ +LC ++D+A F +ML + P +S
Sbjct: 232 SEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSI 291
Query: 297 LKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+ D ++A + +DK+R+ L+
Sbjct: 292 FIHSYCDADDVQSAF---RVLDKMRRYNLL 318
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 153/278 (55%), Gaps = 7/278 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+++ +CKS A E+ KM++R D Y+I+++G + +L + ++ EM+ G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F+ D+++Y +I C+A R+D+ +L R+M P+ F LI+ E +L EA
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q + +RG P TYN+++ +C R+ +A +M+D M G P+ T++I+++
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
KA R ++ +F+ MS + TV TY +V+ FC + ++++A +++ EM +R V P
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTV-TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEM------LDIGI 287
+ Y L++ LC +L+ A + F ++ LDIGI
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 161/322 (50%), Gaps = 1/322 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + + FN L++ LC V A E+ D+M + P + + L+ G +
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ M + GF+P+ V+YG ++N C + + A+EL R+ME N K + +I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL + L A F + + +GF+ + TYN ++G +C + R +D +++ +M K I
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN T+ +++ +K G+ EA + K M ++ G P TY ++ FC +++ A++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D M ++G P + ++ LIN C +++DD + F+EM G+ ++ L Q
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
G E A L Q++ R P
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRP 471
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 160/323 (49%), Gaps = 4/323 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G K ++ +N LI C + + ++ M KR+ P++ ++++L++ + ++
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ +EM G P+ ++Y +I+ C R +EA+++ M + C P F
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING R+ + L+ F + RG TYN +V +C S ++ A ++ EM
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y I+L L G E+A +F ++ K E + Y I++ C ++VD A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKI-EKSKMELDIGIYMIIIHGMCNASKVDDA 527
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV Y+ +I+ LC +D L A F++M + G P +L N+
Sbjct: 528 WDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG-HAPDELTYNI--L 584
Query: 301 LRDEGMEETAVVLAQKIDKLRKT 323
+R ++ A A+ I++++ +
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSS 607
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 1/277 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A ++F M + R P + + L + K + + ++M+ G + + IMIN
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C ++ A ++ +P IF TL+NGL E R+SEAL+ + + G +P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
T N +V C + +++DA ++D M + G PN TY VL+ + K+G+T A +
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
++M + V Y I++ C + +D A +++EM+ +G + Y+TLI C+
Sbjct: 252 RKMEERNIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ DD K ++M+ I P FS L + EG
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 138/279 (49%), Gaps = 5/279 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +N LID CK +E A ++ D M + DPDI ++ IL+ G+ + +
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++REM G + V+Y ++ C + + + A +LF+EM + +P + L++G
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L L +AL+ FG+ +K E + Y ++ C + +++DA+ + + G+ +
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
R Y+I++ L + +A +F++M+ + G P TY I++R + A +
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEE-GHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+EMK+ G + +IN L +LD K F +ML
Sbjct: 602 EEMKSSGFPADVSTVKMVINML-SSGELD---KSFLDML 636
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+++R+M P V+ + + +A K+Y+ + L ++ME+ S + +IN
Sbjct: 74 DLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++LS A G+ K G+EP+ +N ++ C R+++A ++D M + G P
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T + +++ L G+ +A + RM + G +P TY V+ + C + Q +AM +
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMV-ETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+M+ R + YS +I+ LC + LD+A F EM G + ++ L + G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
Query: 306 MEETAVVLAQKIDKLRKTPLV 326
+ L + + K + +P V
Sbjct: 313 RWDDGAKLLRDMIKRKISPNV 333
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 160/299 (53%), Gaps = 4/299 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD N L+ +LCK ++ A++VFD M + +PD+ SYTI+L G+ + L+ M +
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD 382
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M DG PD+ ++ ++I A+ + D+A+ +F EM KP + T+I L
Sbjct: 383 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A++ F Q +G P+ Y+ ++ +C + A ++ E+ G+ +
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIV 502
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+ ++++L K GR +A ++F ++ G P Y +++ +C +++ A+R++D
Sbjct: 503 FFGSIINNLCKLGRVMDAQNIFD-LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + G+ P + Y TL+N C ++D+ F+EML GI+P L++ + L + G
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 151/305 (49%), Gaps = 3/305 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEGWGQQKN 60
+ G ++ +N L+ +LC +A ++ M + PD+ +Y +++G+ ++ +
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++EM G PD+V+Y +++A C A+ D+A R+M P +
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G S + EA++ F + +++ P+ N ++G+ C +I +A + D M G
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y I+L+ G + +F M G P + T+ ++++ + +D A
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLM-LGDGIAPDIYTFNVLIKAYANCGMLDKA 415
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M I++EM+ GV P + Y T+I +LC K+DDA + F +M+D G+ P + L Q
Sbjct: 416 MIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQG 475
Query: 301 LRDEG 305
G
Sbjct: 476 FCTHG 480
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + + +I LC+ ++ A E F++M + PD +Y L++G+ +
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+ E+ ++G D+V +G +IN C R +A +F P ++
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ +AL+ F G EP Y +V YC RI++ + EM + G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T Y+I++ L +AGRT A F M+ + G TY IV+R N D A
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT-ESGIAMNKCTYSIVLRGLFKNRCFDEA 660
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ E++A V + +T+I + ++++A F + G+ P +S +
Sbjct: 661 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN 720
Query: 301 LRDEGMEETA 310
L EG+ E A
Sbjct: 721 LLKEGLVEEA 730
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID K V +A ++F +M +R PD+ +Y+ ++ + + + R+M
Sbjct: 224 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMV 283
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G PD +Y +I + S ++ EAV +F+EM + P TL+ L ++
Sbjct: 284 NKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK 343
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F +G P+ +Y ++ Y + D + D M GI P+ T+++++
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLI 403
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
G ++A +F M R G +P V TY V+ C ++D AM +++M +GV
Sbjct: 404 KAYANCGMLDKAMIIFNEM-RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+P + Y LI C L A + E+++ G+R F ++ L
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNL 511
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 139/293 (47%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L ++ ++ LCK+R +++A+ +M + PD +Y L+ G+
Sbjct: 251 GIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEA 310
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V++EM+ PDVV+ ++ + C + EA ++F M P + ++NG
Sbjct: 311 VRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNG 370
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ L + F G P+ T+N ++ AY ++ A + +EMR G+ P+
Sbjct: 371 YATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPH 430
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY V+ L + G+ ++A F +M + G P Y +++ FC + + A +
Sbjct: 431 VVTYMTVIAALCRIGKMDDAMEKFNQMIDQ-GVVPDKYAYHCLIQGFCTHGSLLKAKELI 489
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
E+ G+ + + ++IN+LC ++ DA F +++G+ P +++ L
Sbjct: 490 SEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 1/225 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N L+D C +E+A VFD M +P++ Y L+ G+ + +
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++REM G +P + Y I+I+ A R A F EM + + + ++ G
Sbjct: 591 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 650
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + EA+ F + + + + T N ++ + R+ +A + + + G+ P
Sbjct: 651 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 710
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
TY I++ +L+K G EEA +F M + G EP VVR
Sbjct: 711 AVTYSIMITNLLKEGLVEEAEDMFSSM-QNAGCEPDSRLLNHVVR 754
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 134/329 (40%), Gaps = 45/329 (13%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+R RAQ R P +Y IL++ + + ++ G D +
Sbjct: 97 NRAASRAQ------GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAII 150
Query: 83 YGIMINAHCSAKRYDEAV------------------------------------ELFREM 106
++ C AKR DEA+ +L R M
Sbjct: 151 ASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMM 210
Query: 107 E--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
T C P + T+I+G E +++A F + +RG P+ TY++VV A C +
Sbjct: 211 AEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 270
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ A + +M G+ P+ TY+ +++ G+ +EA VFK M R+ P V
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRQSILPDVVAL 329
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ C ++ A ++D M +G P + Y+ ++N + L D F ML
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVL 313
GI P F+ L +A + GM + A+++
Sbjct: 390 DGIAPDIYTFNVLIKAYANCGMLDKAMII 418
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 126 GSEKRLSEALQFFGQSKKRG---FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GS L+ AL S+ +G P + TY ++ + R A ++ + G+
Sbjct: 86 GSGPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGL- 144
Query: 183 PNTRTYDIVLHHLIK----AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
R I+ HL+K A RT+EA + + + G P V +Y I+++ C +
Sbjct: 145 ---RVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSG 201
Query: 239 MAMRIWDEMKARGVL--PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
A + M G + P + Y+T+I+ E ++ AC F+EM+ GI P +S+
Sbjct: 202 QADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 261
Query: 297 LKQAL-RDEGMEETAVVLAQKIDK 319
+ AL + M++ L Q ++K
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNK 285
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 65/152 (42%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ ++ L K+R + A +F +++ DI + ++ G Q +
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ + G P V+Y IMI +EA ++F M+ C+P +
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
++ L + + A + + +R F E T
Sbjct: 752 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 783
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 152/285 (53%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ F+ LIDTLCK V A+++ + M +R P++ +Y L++G+ +L S
Sbjct: 302 GVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSA 361
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G EPD +SY +IN +C + EA+ L+ EM P+ + TL+ G
Sbjct: 362 RELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKG 421
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + ++ +A + FG K G + Y + C + + +A + +E++ N
Sbjct: 422 LFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLN 481
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ L KAG+ E A+ +F+++S++ G +P V TY I++ FC QVD A ++
Sbjct: 482 IENYSCLIDGLCKAGKLETAWELFEKLSQE-GLQPDVVTYNIMIHGFCKVGQVDNANILF 540
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++M+ G P + Y+TL+ C +KL++ K +M+ + P
Sbjct: 541 EKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSP 585
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 159/318 (50%), Gaps = 13/318 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQKNLLSMNE 66
++ +ID LCK + A+E+F++MK + PD+ SY+ L+ G W Q K+L
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHL----- 294
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM D G +PD+V++ ++I+ C + EA +L M P+ + +LI+G
Sbjct: 295 -FDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFC 353
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
L+ A + F +G EP+ +Y ++ YC + ++ +A + +EM + G PN
Sbjct: 354 MVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVT 413
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY +L L + G+ +A +F M + G Y I + C N + AM +++E
Sbjct: 414 TYGTLLKGLFQKGKVGDAKKLFGVM-KTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNE 472
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
+K+ + YS LI+ LC KL+ A + F+++ G++P ++ + G
Sbjct: 473 LKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQ 532
Query: 307 EETAVVLAQKIDKLRKTP 324
+ A +L +K+++ TP
Sbjct: 533 VDNANILFEKMEENGCTP 550
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 149/307 (48%), Gaps = 7/307 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +L + L + LC V A + +R + P++ +YT L++G + +
Sbjct: 121 GLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEA 180
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------EATNCKPSPHIF 118
++ M+ G P+ V+YG +I C + A++L +EM NCKP +
Sbjct: 181 TRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITY 240
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+GL R EA + F + K +G P+ +Y+ ++ +C + + + + + DEM
Sbjct: 241 SIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVD 300
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P+ T+ +++ L K G+ EA + + M ++ G P + TY ++ FC ++
Sbjct: 301 QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQR-GIVPNLITYNSLIDGFCMVGDLN 359
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++ M ++G+ P Y+TLIN C K+ +A + EML +G P + L
Sbjct: 360 SARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLL 419
Query: 299 QALRDEG 305
+ L +G
Sbjct: 420 KGLFQKG 426
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 9/277 (3%)
Query: 21 CKSRHVERAQ--EVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
CK+ ++ Q FD M + P I S+ LL G + + + +Y EM+ G P
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
D+ + I+ N C+ R EA+ + P+ + TLI GL E R+SEA + F
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM----RKCGIG--PNTRTYDIVL 192
+ +K G P A TY ++ C + +N A ++ EM + G+ P TY I++
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR +EA +F+ M + G P V +Y ++ FC + D + ++DEM +GV
Sbjct: 245 DGLCKVGREDEAKELFEEM-KAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGV 303
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P M +S LI++LC E K+ +A K + M+ GI P
Sbjct: 304 QPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVP 340
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 153/325 (47%), Gaps = 7/325 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR------RFDPDIKSYTILLEG 54
M K G + LI LC++ +V A ++ +M P + +Y+I+++G
Sbjct: 187 MQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDG 246
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ E++ EMK G PDV+SY +I+ C A ++D++ LF EM +P
Sbjct: 247 LCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPD 306
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
F LI+ L E +++EA + +RG P TYN+++ +C +N A +
Sbjct: 307 MVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFL 366
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M G+ P+ +Y +++ K + +EA +++ M + G P V+TY +++
Sbjct: 367 SMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM-LQVGKSPNVTTYGTLLKGLFQK 425
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+V A +++ MK GV +Y ++ LC D L +A + F E+ + + +
Sbjct: 426 GKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENY 485
Query: 295 SNLKQALRDEGMEETAVVLAQKIDK 319
S L L G ETA L +K+ +
Sbjct: 486 SCLIDGLCKAGKLETAWELFEKLSQ 510
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 117/232 (50%), Gaps = 1/232 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ + + LI+ CK+ V+ A ++++M + P++ +Y LL+G Q+
Sbjct: 368 MPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGK 427
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ MK G + YGI ++ C EA+ELF E+++ N K + +
Sbjct: 428 VGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSC 487
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL +L A + F + + G +P+ TYN ++ +C ++++A + ++M + G
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
P+ Y+ +L + + EE + +M +K P ++ IVV M C
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQK-DVSPNAASCTIVVDMLC 598
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 92/197 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + L+ L + V A+++F MK + + Y I L+G +
Sbjct: 403 MLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDC 462
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ E+K F+ ++ +Y +I+ C A + + A ELF ++ +P +
Sbjct: 463 LFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNI 522
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G ++ A F + ++ G P+ YN ++ +C ++ + +++ +M +
Sbjct: 523 MIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582
Query: 181 IGPNTRTYDIVLHHLIK 197
+ PN + IV+ L K
Sbjct: 583 VSPNAASCTIVVDMLCK 599
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 8/162 (4%)
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A+ D M + P +++ +L L K + +S++ M R G P + T I+
Sbjct: 75 AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEM-RLAGLSPDLFTLSILA 133
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C +V A+ + RG +P + Y+TLI LC E ++ +A + F M +G
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
P + L + L G A+ KL K L D Q
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIAL-------KLHKEMLNDASQ 228
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ ++ +N +I CK V+ A +F+KM++ PDI +Y LL G+ + L +
Sbjct: 512 GLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEV 571
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
++ +M P+ S I+++ C ++Y + V+L
Sbjct: 572 IKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 163/322 (50%), Gaps = 5/322 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + LI C++ ++ A+++ +KMK+ PD +Y LL G +Q L +++
Sbjct: 159 VPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSK 218
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM + G EPD SY ++ C + +Y+EA ++ +M C P + +L++G
Sbjct: 219 LLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFC 278
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ EA + R P TY ++G + + R+ DAYR+M++M K GI P+
Sbjct: 279 KVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLV 338
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ +L L KAG+ EEA+ + + M K P V TY I+V C +VD A + +
Sbjct: 339 TYNCLLDGLCKAGKLEEAHELLEVMVEKD-CAPDVVTYSILVNGLCKLGKVDDARLLLEM 397
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEG 305
M RG P + ++T+I+ C K+D+ K + M ++ P +S L +
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANR 457
Query: 306 MEETAVVLAQKIDKLRKTPLVD 327
M++ +L DK + +++
Sbjct: 458 MQDAFAILGISPDKASYSSMLE 479
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 161/315 (51%), Gaps = 7/315 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ +L +N L+D LCK+ +E A E+ + M ++ PD+ +Y+IL+ G +
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGK 387
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M + G +P++V++ MI+ C A + DE ++ M+ +C P + T
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G R+ +A G S P+ +Y++++ C + ++ +A +MD M K G
Sbjct: 448 LIDGYCKANRMQDAFAILGIS------PDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQG 501
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P + Y +++ L R +EA + + MS + G EP + TY I++ C +V+ A
Sbjct: 502 CPPTSSHYALIIGGLCDVERGDEALKMLQVMSER-GCEPNLYTYSILINGLCKTKRVEDA 560
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + D M +G +P + Y++LI+ C +K+D A + F+ M D G P ++ L
Sbjct: 561 INVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISG 620
Query: 301 LRDEGMEETAVVLAQ 315
G E A+ + Q
Sbjct: 621 FCQSGNVEKAIEVMQ 635
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 150/310 (48%), Gaps = 7/310 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + +N L++ LCK +E ++ ++M + +PD SY ++ +
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +M + PDVV+Y +++ C + DEA L +M C P+ + T
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G RL++A + K G P+ TYN ++ C + ++ +A+ +++ M +
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY I+++ L K G+ ++A + + M + G +P + T+ ++ FC +VD
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLER-GCQPNLVTFNTMIDGFCKAGKVDEG 426
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + MK P + YSTLI+ C +++ DA +GI P +S++ +
Sbjct: 427 HKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA------FAILGISPDKASYSSMLEG 480
Query: 301 LRDEGMEETA 310
L G E A
Sbjct: 481 LCSTGKVEEA 490
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 144/307 (46%), Gaps = 4/307 (1%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N ++ C+ ++RA F K P +Y IL+ G Q + + ++ EM
Sbjct: 63 NTILKAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ 120
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
PD Y +I C + D A + + M +C P + +LI G L E
Sbjct: 121 KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDE 180
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + + K+ G P+ YNA++ C ++ + ++++EM + G P+T +Y+ V+
Sbjct: 181 ARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVA 240
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L ++G+ EEA + ++M K P V TY ++ FC +++D A R+ ++M R
Sbjct: 241 CLCESGKYEEAGKILEKMIEKK-CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCA 299
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVV 312
P + Y+TLI D+L DA + ++M GI P ++ L L G +EE +
Sbjct: 300 PTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359
Query: 313 LAQKIDK 319
L ++K
Sbjct: 360 LEVMVEK 366
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LI LC+ + ++ A ++ D+M ++ PD Y L+ G + + + V + M +
Sbjct: 98 LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PDV++Y +I C DEA +L +M+ + P + L+NGL + +L E
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVS 217
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + + G EP+ +YN VV C S + +A +++++M + GP+ TY+ ++
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGF 277
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K + +EA + + M + PTV TY ++ F ++ A R+ ++M G+ P
Sbjct: 278 CKVSKMDEAERLLEDMVGRR-CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPD 336
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ Y+ L++ LC KL++A + + M++ P +S L L G + A +L +
Sbjct: 337 LVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLE 396
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 30/254 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ------ 58
G + L FN +ID CK+ V+ +V + MK+ PD+ +Y+ L++G+ +
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA 461
Query: 59 -----------------KNLLSMN------EVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
+ L S EV M G P Y ++I C +R
Sbjct: 462 FAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVER 521
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
DEA+++ + M C+P+ + + LINGL KR+ +A+ ++G P+ TY +
Sbjct: 522 GDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTS 581
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ +C +++ AY+ MR G P+ Y+I++ ++G E+A V + M K
Sbjct: 582 LIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK- 640
Query: 216 GTEPTVSTYEIVVR 229
G P +TY ++R
Sbjct: 641 GCNPDAATYFSLMR 654
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G+ + ++ +++ LC + VE AQEV D M K+ P Y +++ G +
Sbjct: 465 LGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDE 524
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ + M + G EP++ +Y I+IN C KR ++A+ + M C P + +LI+
Sbjct: 525 ALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLID 584
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G ++ A Q F + G EP+ YN ++ +C S + A +M M + G P
Sbjct: 585 GFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644
Query: 184 NTRTYDIVLHHL 195
+ TY ++ L
Sbjct: 645 DAATYFSLMRSL 656
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 73/128 (57%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + L ++ LI+ LCK++ VE A V D M ++ PD+ +YT L++G+ +
Sbjct: 532 MSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINK 591
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + ++ M+D G EPD ++Y I+I+ C + ++A+E+ + M C P + +
Sbjct: 592 MDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFS 651
Query: 121 LINGLGSE 128
L+ L +E
Sbjct: 652 LMRSLTTE 659
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 3/192 (1%)
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E FF + +P TY A++ + + + +EM P+ T++ +L
Sbjct: 7 EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G + A S F+ K PT TY I++ C ++D A ++ DEM +
Sbjct: 67 KAYCQIGDLDRALSHFRG---KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P +Y+ LI LC K+D A + ML+ P +++L + A
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183
Query: 313 LAQKIDKLRKTP 324
L +K+ + TP
Sbjct: 184 LMEKMKESGLTP 195
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 151/320 (47%), Gaps = 2/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N ++ C+ +ERA +V M + PD +Y+ ++ G+ +
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK 420
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ +M G PDV +I+A C A D A EL R +C P +
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L KRL EA + K P+ TYN+VV C S RINDA+ + D MR G
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAG 540
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY IV+H K + A+ + +RM ++ P V TY ++ C VD A
Sbjct: 541 VMPDVVTYSIVIHSFCKDNNLDSAFKMLERM-KEAKCVPDVVTYSALINGLCKAGTVDKA 599
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM G P + Y+TLI+ LC +K++ A + + M P ++ L
Sbjct: 600 FDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLING 659
Query: 301 LRDEG-MEETAVVLAQKIDK 319
L + +EE VL + DK
Sbjct: 660 LCNASRLEEAWRVLREMKDK 679
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 155/327 (47%), Gaps = 4/327 (1%)
Query: 1 MDKF---GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
MDK G + + + L+D C+ ++ A E+ KM +R + P+ +Y ++ + +
Sbjct: 323 MDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCR 382
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ ++ ++V + M G PD ++Y +I+ C A + EA +L +M C+P
Sbjct: 383 RNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVAC 442
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
TLI+ L + A + S P+ Y+ ++ A C + R+ +A +D M
Sbjct: 443 LSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMV 502
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K P+ TY+ V+ L K+ R +A+ +F RM R G P V TY IV+ FC + +
Sbjct: 503 KNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM-RAAGVMPDVVTYSIVIHSFCKDNNL 561
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D A ++ + MK +P + YS LIN LC +D A FQEML G P ++ L
Sbjct: 562 DSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTL 621
Query: 298 KQALRDEGMEETAVVLAQKIDKLRKTP 324
L E A + + + K TP
Sbjct: 622 IDGLCKINKVEQAAEMLEIMRKQSCTP 648
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 158/318 (49%), Gaps = 6/318 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M + G + +N +ID CK ++ A + ++M P++ +YT+LL+ + G+
Sbjct: 1009 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 1068
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
++ + + EV M + G+ P++ +Y +++ C + A +L M C P+
Sbjct: 1069 AEDAIGLVEV---MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 1125
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+I GL ++ E + Q P+ T+N ++ A C + R++ AY + + ++
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ G PN TY+ ++H L K+ R ++A + + M+RK G P + TY V+ C + +V
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 1245
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D A +++ +M + G+ P YS +I+SLC +D+A + ML G P + L
Sbjct: 1246 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 1305
Query: 298 KQALRDEGMEETAVVLAQ 315
G + A+ + Q
Sbjct: 1306 IDGFCKTGNLDKALEILQ 1323
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 148/290 (51%), Gaps = 2/290 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F LI LC++ + A E+ +M + ++ + ++++G + L S E+++EM+
Sbjct: 880 FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEME 939
Query: 73 DDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G PDV +Y ++++ + + D+A L +M + C P+ + +L++GL +L
Sbjct: 940 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKL 999
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA + + G P TYN ++ +C RI++AY +++EM G PN TY ++
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 1059
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L K G+ E+A + + M K G P + TY ++ MFC +V+ A ++ M +G
Sbjct: 1060 LDAFCKCGKAEDAIGLVEVMVEK-GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+P + Y+T+I LC K+ + ++ML P F+ + A+
Sbjct: 1119 CVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 1168
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 151/286 (52%), Gaps = 4/286 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + N L+ L + + + A +V+ K P++ ++TIL+ G + ++ +
Sbjct: 839 GYNHDTYTCNCLLQALLRLKRPKDALQVY--RNKLCCSPNMFTFTILIHGLCRAGDIGTA 896
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCKPSPHIFCTLIN 123
E+ +EM G +V+ + ++I CSA++ D A+ELF+EME + +C P + T+++
Sbjct: 897 YELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVD 956
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L ++ +A + +G P TY++++ C + ++++A ++ M + G P
Sbjct: 957 SLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 1016
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY+ ++ K GR +EAY + + M G +P V TY +++ FC + + A+ +
Sbjct: 1017 NIVTYNTIIDGHCKLGRIDEAYHLLEEMV-DGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 1075
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ M +G +P + Y++L++ C +D+++ AC+ M+ G P
Sbjct: 1076 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVP 1121
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 159/343 (46%), Gaps = 20/343 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + E+ N L++ L K+ +A ++F + ++ D +Y+ L+ G+ + +L
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ EM G + + ++ C A + +AV FREM T C P + T+ING
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMING 239
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL +A++ + GF P +YN V+ +C + R+ +A ++++M G P+
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y V++ L K + +EA V +M ++ G +P V TY +V FC +D A+ +
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQR-GCQPNVITYGTLVDGFCRVGDLDGAVELV 358
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN-------- 296
+M RG P Y+ +++ C + ++ A + Q M+ G P +S
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKA 418
Query: 297 ---------LKQALRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L+Q +R G L+ ID L K +D Q
Sbjct: 419 GKLREAHDLLEQMIR-RGCRPDVACLSTLIDALCKAAAIDSAQ 460
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 159/347 (45%), Gaps = 19/347 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQK 59
M + G+ Q + N +I LC +R ++ A E+F +M++ PD+ +Y+ +++ +
Sbjct: 903 MPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSG 962
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + +M G P+VV+Y +++ C A + DEA L + M + C P+ +
Sbjct: 963 KVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 1022
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+I+G R+ EA + G +P TY ++ A+C + DA +++ M +
Sbjct: 1023 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 1082
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN TY+ +L K E A + M +K G P V +Y V+ C +V
Sbjct: 1083 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK-GCVPNVVSYNTVIAGLCKATKVHE 1141
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+ + ++M + +P + ++T+I+++C ++D A + F + + G P +++L
Sbjct: 1142 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVH 1201
Query: 300 AL-----------------RDEGMEETAVVLAQKIDKLRKTPLVDRG 329
L R +G + ID L K+ VDR
Sbjct: 1202 GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 139/301 (46%), Gaps = 2/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GLK ++ LC + A F +M K PD +Y ++ G +
Sbjct: 187 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 245
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM D+GF P+V SY +++ C A R + A+ L +M C P + T
Sbjct: 246 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTT 305
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL ++ EA + + +RG +P TY +V +C ++ A ++ +M + G
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+ ++H + E A+ V + M + G P Y ++ FC ++ A
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMI-QTGCPPDAINYSTIISGFCKAGKLREA 424
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++M RG P + STLI++LC +D A + + + + P +S L A
Sbjct: 425 HDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHA 484
Query: 301 L 301
L
Sbjct: 485 L 485
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 133/271 (49%), Gaps = 1/271 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I+ L KS ++ A + ++M F P++ SY +L G+ + + + + +M
Sbjct: 233 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 292
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDVVSY +IN C + DEA + +M C+P+ + TL++G L
Sbjct: 293 TRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 352
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A++ + +RG+ P A TYN ++ +C + A++++ M + G P+ Y ++
Sbjct: 353 GAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTII 412
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
KAG+ EA+ + ++M R+ G P V+ ++ C A +D A +
Sbjct: 413 SGFCKAGKLREAHDLLEQMIRR-GCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDC 471
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
P + YS LI++LC +L +A + M+
Sbjct: 472 APDVVAYSILIHALCKAKRLPEAESWLDVMV 502
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 108/199 (54%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++D LCKSR + A +FD+M+ PD+ +Y+I++ + + NL S ++ MK
Sbjct: 513 YNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMK 572
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ PDVV+Y +IN C A D+A ++F+EM C P+ + TLI+GL ++
Sbjct: 573 EAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVE 632
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + +K+ P++ TY ++ C + R+ +A+R++ EM+ G P+ TY +L
Sbjct: 633 QAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLL 692
Query: 193 HHLIKAGRTEEAYSVFKRM 211
L K E + K M
Sbjct: 693 RALQKTNNLELVEQLLKEM 711
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 149/361 (41%), Gaps = 58/361 (16%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G ++ +N +ID LCKS+ V+RA ++F +M PD +Y+I++ + + +
Sbjct: 1222 KQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMD 1281
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
N V M +GF+P ++YG +I+ C D+A+E+ + + + P F I
Sbjct: 1282 EANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFI 1341
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L RL +A + + G P+ TYN ++ +C + DA + + MR+CG
Sbjct: 1342 DWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCE 1401
Query: 183 PNTRTYDIVLHHLI---------------------------------------------- 196
P+ TY ++ HL+
Sbjct: 1402 PDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCA 1461
Query: 197 ------KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
K G ++A VF+ M ++ V + ++ ++ ++ Q + A +W M
Sbjct: 1462 IVDMFGKCGSPQDARKVFEGMDQR-----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLE 1516
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEML-DIGIRPPGQLFSNLKQALRDEGMEET 309
GV P + +L+ CH LD A F + D G+ P FS + L G+
Sbjct: 1517 GVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNE 1576
Query: 310 A 310
A
Sbjct: 1577 A 1577
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 114/225 (50%), Gaps = 2/225 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLS 63
G L +N L+ LCKSR ++A+ + +M +K+ PDI +Y +++G + K +
Sbjct: 1188 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDR 1247
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+++ +M DG PD V+Y I+I++ C + DEA + M P + TLI+
Sbjct: 1248 AYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID 1307
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G L +AL+ +G P+ T++ + R+ A +++ M + G+ P
Sbjct: 1308 GFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 1367
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
+T TY+ +L A TE+A +F+ M R+ G EP +TY +V
Sbjct: 1368 DTVTYNTLLKGFCDASLTEDAVDLFEVM-RQCGCEPDNATYTTLV 1411
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 19/287 (6%)
Query: 31 EVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAH 90
E+ K+ +R DP ++ W + + DG++ ++ ++N
Sbjct: 94 EIVGKVLQRLIDP---GAALVFFEWAETR--------------DGYQHEIFCCNCLLNVL 136
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
A +Y +A +LFR + TLI+G ++ A + F + ++G + A
Sbjct: 137 VKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHA 196
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
+ +++ C + + +DA EM K P++ TY+ +++ L K+ R ++A + +
Sbjct: 197 GVHKSILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDRLDDAIRLLEE 255
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M G P V +Y V+ FC +V+ A+ + ++M RG P + Y+T+IN LC D
Sbjct: 256 MVDN-GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLD 314
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
++D+AC+ +M+ G +P + L G + AV L +K+
Sbjct: 315 QVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L +N LID LCK VE+A E+ + M+K+ PD +YT L+ G L
Sbjct: 610 GCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEA 669
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
V REMKD G PD ++YG ++ A + +L +EMEAT
Sbjct: 670 WRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEAT 714
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 24/232 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + +N L+ C + E A ++F+ M++ +PD +YT L+ +K+
Sbjct: 1360 MLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKS 1419
Query: 61 LLS-MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ EV + M D GF+ +N S+K +E E+EA + C
Sbjct: 1420 YKDLLAEVSKSMVDTGFK---------LNHELSSK-----LEASIEVEA-----DVRLGC 1460
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+++ G +A + F +R ++A++G Y + + A+ + M
Sbjct: 1461 AIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLE 1516
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
G+ P+ T+ +L AG + A F +SR G EP V + V+ +
Sbjct: 1517 GVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLL 1568
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G +T T + +L L++ R ++A V++ K P + T+ I++ C +
Sbjct: 839 GYNHDTYTCNCLLQALLRLKRPKDALQVYRN---KLCCSPNMFTFTILIHGLCRAGDIGT 895
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL-FSNLK 298
A + EM GV + +++ +I LC KLD A + F+EM + G PP +S +
Sbjct: 896 AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIV 955
Query: 299 QALRDEGMEETAVVLAQKI 317
+L G + A L + +
Sbjct: 956 DSLVKSGKVDDACRLVEDM 974
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G ++ + LID LC + ++ A E+F KMK PD +Y +L+ + +
Sbjct: 290 MEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGD 349
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E + EM+ DG+ PDV+++ I++NA C A DEA L M P+ H + T
Sbjct: 350 LGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNT 409
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL RL +AL F + G P A TY + Y S R + A ++M+ G
Sbjct: 410 LISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRG 469
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + L+ L + GR EA +F R+ + G P TY ++++ + QVD A
Sbjct: 470 IAPNIVACNASLYSLAEMGRLREAKVIFNRL-KSNGLAPDSVTYNMMMKCYSKAGQVDEA 528
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +M P + + ++LIN+L ++D+A K F + D+ + P ++ L
Sbjct: 529 IELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAG 588
Query: 301 LRDEGMEETAVVL 313
L EG + A+ L
Sbjct: 589 LGKEGQVQRAMEL 601
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 166/320 (51%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK L F+ L+ K R E + + ++M+ P+I +YTI + G+ +
Sbjct: 224 GLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEA 283
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M+DDG PDVV+Y ++I+A C+A + D+A+ELF +M+A++ KP + T+++
Sbjct: 284 CRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDK 343
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +F+ + + G+ P+ T+ +V A C + I++A+ ++D MRK G+ PN
Sbjct: 344 FSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPN 403
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L++ R ++A +F M G PT TY + + + + + D A+ +
Sbjct: 404 LHTYNTLISGLLRVNRLDDALDLFNNM-ETLGVVPTAYTYILFIDFYGKSGRSDKALETF 462
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++MK RG+ P + + + SL +L +A F + G+ P ++ + +
Sbjct: 463 EKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKA 522
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G + A+ L + + + P
Sbjct: 523 GQVDEAIELLSDMSENQCEP 542
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 164/315 (52%), Gaps = 1/315 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+ G+K L +N LI+ + E A +F +MK PD+ +Y +LL+ G+ +
Sbjct: 783 ELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKIN 842
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ E+Y +M +P+ +++ I+I + D+A++LF ++ + + P+P + L+
Sbjct: 843 ELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLL 902
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL RL EA + F + G P YN ++ + + +N A + M + GI
Sbjct: 903 DGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIR 962
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ ++Y ++ L +AGR ++A F+++ ++ G Y +++ + +++ A+
Sbjct: 963 PDLKSYTSLVGCLCEAGRVDDALHYFEKL-KQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++DEM++RG+ P + Y++LI +L ++ A K ++E+ IG+ P ++ L +
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYS 1081
Query: 303 DEGMEETAVVLAQKI 317
G ++A + +++
Sbjct: 1082 MSGNSDSAYAVYKRM 1096
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 137/315 (43%), Gaps = 34/315 (10%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +++ L R V VF+ M+ + D+ +Y I+ +G + L + +M++
Sbjct: 128 NHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMRE 187
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GF + SY +I+ + EA+E++R M KPS F L+ G +
Sbjct: 188 AGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTET 247
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ + G +P TY + + RI++A R+M M G GP+ TY +++
Sbjct: 248 VKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLID 307
Query: 194 HLIKAGRTEEAYSVFKRM---SRKP-------------------------------GTEP 219
L AG+ ++A +F +M S KP G P
Sbjct: 308 ALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAP 367
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V T+ I+V C +D A + D M+ +GVLP +H Y+TLI+ L ++LDDA F
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427
Query: 280 QEMLDIGIRPPGQLF 294
M +G+ P +
Sbjct: 428 NNMETLGVVPTAYTY 442
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 138/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G +N LI L +S A E++ +M P +K+++ L+ G++++
Sbjct: 185 MREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRD 244
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ + EM+ G +P++ +Y I I A R DEA + + ME C P +
Sbjct: 245 TETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTV 304
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + +L +A++ F + K +P+ TY ++ + + EM G
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T+ I+++ L KAG +EA+ + M RK G P + TY ++ ++D A
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVM-RKQGVLPNLHTYNTLISGLLRVNRLDDA 423
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +++ M+ GV+P + Y I+ + D A + F++M GI P
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAP 472
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 39/274 (14%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGW-GQQKNLLSMNEVYREMKD 73
+I LCK + AQ VF + K P ++SY L+EG+ G + ++ N ++ EMK+
Sbjct: 760 IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWN-LFTEMKN 818
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G PDV +Y ++++AH + + +E EL+ +M ++CKP+ +I L L +
Sbjct: 819 AGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDK 878
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL F Y+ V G + P TY +L
Sbjct: 879 ALDLF--------------YDLVSGDF---------------------SPTPCTYGPLLD 903
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+K+GR EEA +F+ M G P + Y I++ F V+ A ++ M G+
Sbjct: 904 GLLKSGRLEEAKELFEEMV-DYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIR 962
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
P + Y++L+ LC ++DDA YF+++ G+
Sbjct: 963 PDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGL 996
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 1/251 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +I L KS +++A ++F + F P +Y LL+G + L E++ EM D
Sbjct: 864 NIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVD 923
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G P+ Y I+IN + A ELF+ M +P + +L+ L R+ +
Sbjct: 924 YGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDD 983
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL +F + K+ G ++ YN ++ S RI +A + DEM+ GI P+ TY+ ++
Sbjct: 984 ALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLIL 1043
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
+L AG E+A +++ + + G EP V TY ++R + + D A ++ M G
Sbjct: 1044 NLGVAGMVEQAGKLYEEL-QFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCS 1102
Query: 254 PVMHMYSTLIN 264
P ++ L N
Sbjct: 1103 PNTGTFAQLPN 1113
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 148/313 (47%), Gaps = 37/313 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N LI+TL K+ V+ A ++F ++K + P + +Y L+ G G++ + E++ M
Sbjct: 547 INSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMT 606
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G P+ +++ +++ C D A+++ +M NC P F T+I+GL EKR+S
Sbjct: 607 GNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVS 666
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM-DEMRKCGIGPNTRTYDIV 191
+A+ F Q KK P+ T ++ + + DA+++ D + + G+ + R ++ +
Sbjct: 667 DAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDL 725
Query: 192 LHHLIKAGRTEE-----------------------------------AYSVFKRMSRKPG 216
+ ++ TE+ A SVF R +++ G
Sbjct: 726 MGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELG 785
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+PT+ +Y ++ F +MA ++ EMK G P + Y+ L+++ K+++
Sbjct: 786 VKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELF 845
Query: 277 KYFQEMLDIGIRP 289
+ +++M+ +P
Sbjct: 846 ELYEQMICSSCKP 858
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 131/315 (41%), Gaps = 37/315 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + ID KS ++A E F+KMK R P+I + L +
Sbjct: 430 METLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGR 489
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ +K +G PD V+Y +M+ + A + DEA+EL +M C+P + +
Sbjct: 490 LREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINS 549
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN L R+ EA + F + K P TYN ++ ++ A + M G
Sbjct: 550 LINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNG 609
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT T++ +L L C N +VD+A
Sbjct: 610 CPPNTITFNTILDCL------------------------------------CKNDEVDLA 633
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ +M +P + ++T+I+ L E ++ DA F +M + + P L
Sbjct: 634 LKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPG 692
Query: 301 LRDEGMEETAVVLAQ 315
+ G+ E A +A+
Sbjct: 693 VVKNGLMEDAFKIAE 707
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N +ID L +S +E A ++D+M+ R +PD+ +Y L+ G +
Sbjct: 995 GLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQA 1054
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y E++ G EP+V +Y +I + + D A +++ M C P+ F L N
Sbjct: 1055 GKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 45/88 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ +L +N LI L + VE+A +++++++ +P++ +Y L+ G+ N
Sbjct: 1026 MQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGN 1085
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMIN 88
S VY+ M G P+ ++ + N
Sbjct: 1086 SDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 170/339 (50%), Gaps = 17/339 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +ID LCK +E ++ +F +M++ PD+ +Y L++G+G+ +L +
Sbjct: 225 GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEV 284
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMKD G PD+++Y +IN +C ++ A E F EM+ KP+ + TLI+
Sbjct: 285 ASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 344
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + A++ ++ G P TY +++ A C + + +A++++++M + G+ N
Sbjct: 345 FCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 404
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L L KAGR EA VF+ M K G P Y +V + +++ AM+I
Sbjct: 405 IVTYTALLDGLCKAGRMIEAEEVFRSM-LKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--------- 295
+M + P + +Y ++I C + KL++ +EM GI + +
Sbjct: 464 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 523
Query: 296 -------NLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
N Q ++D G+E T V ID L + +V+
Sbjct: 524 GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVE 562
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 156/311 (50%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ +N LID K +E +F++MK PDI +Y L+ + + +
Sbjct: 256 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 315
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E + EMK++G +P+VV+Y +I+A C A++L +M T P+ + +
Sbjct: 316 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTS 375
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L+EA + + G + TY A++ C + R+ +A + M K G
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + Y ++H IKA R E+A + K+M+ + +P + Y ++ C +++
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKILKQMT-ECNIKPDLILYGSIIWGHCSQRKLEET 494
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I +EMK+RG+ + +T+I++ K DA +FQEM D+G+ + L
Sbjct: 495 KLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDG 554
Query: 301 LRDEGMEETAV 311
L + G+ E AV
Sbjct: 555 LCEAGIVELAV 565
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK+ ++ A ++ + M + +I +YT LL+G +
Sbjct: 361 MRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGR 420
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EV+R M DG P+ Y +++ + A+R ++A+++ ++M N KP ++ +
Sbjct: 421 MIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGS 480
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G S+++L E + K RG ++ AY + + +DA EM+ G
Sbjct: 481 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 540
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY +++ L +AG E A F RM G +P V+ Y ++ C N ++ A
Sbjct: 541 VEATIVTYCVLIDGLCEAGIVELAVDYFCRM-LSLGLQPNVAVYTSLIDGLCXNNCIESA 599
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++DEM+ RG+ P + ++ LI+ L +A M ++ I ++++L
Sbjct: 600 KKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSG 659
Query: 301 LRDEG 305
G
Sbjct: 660 FSQCG 664
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 151/303 (49%), Gaps = 2/303 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ L KS + + ++ F+ M P + +Y ++++ ++ +L + ++ +M++
Sbjct: 199 NFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMRE 258
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G PDVV+Y +I+ + +E LF EM+ C P + LIN +++
Sbjct: 259 MGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR 318
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A ++F + K G +P TY+ ++ A+C + A +++ +MR+ G+ PN TY ++
Sbjct: 319 AFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLID 378
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
KAG EA+ + M + G + + TY ++ C ++ A ++ M G+
Sbjct: 379 ANCKAGNLTEAWKLLNDM-LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 437
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAVV 312
P +Y+ L++ ++++DA K ++M + I+P L+ ++ +EET ++
Sbjct: 438 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 497
Query: 313 LAQ 315
L +
Sbjct: 498 LEE 500
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 142/319 (44%), Gaps = 2/319 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L + +E A E F +M+ R P +S LL + N + + + +M
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P V +Y +MI+ C + + LF +M P + +LI+G G L
Sbjct: 223 GAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLE 282
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E F + K G P+ TYN ++ YC ++ A+ EM+ G+ PN TY ++
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLI 342
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G + A + M R+ G P TY ++ C + A ++ ++M GV
Sbjct: 343 DAFCKEGMMQGAIKLLXDM-RRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAV 311
+ Y+ L++ LC ++ +A + F+ ML GI P Q+++ L ++ E ME+
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461
Query: 312 VLAQKIDKLRKTPLVDRGQ 330
+L Q + K L+ G
Sbjct: 462 ILKQMTECNIKPDLILYGS 480
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 151/320 (47%), Gaps = 1/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K + + L+D LCK+ + A+EVF M K P+ + YT L+ G+ + +
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAER 455
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ ++M + +PD++ YG +I HCS ++ +E + EM++ +P I T
Sbjct: 456 MEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTT 515
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + S+AL FF + + G E TY ++ C + + A M G
Sbjct: 516 IIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLG 575
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++ L E A +F M + G P ++ + ++ + + A
Sbjct: 576 LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCR-GMTPDITAFTALIDGNLKHGNLQEA 634
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + +H+Y++L++ +L A K+F EM++ GI P L L +
Sbjct: 635 LVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLRE 694
Query: 301 LRDEGMEETAVVLAQKIDKL 320
G + A+ L +++++
Sbjct: 695 YYKRGQLDEAIELKNEMERM 714
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ + + LID LC + +E A+++FD+M+ R PDI ++T L++G + N
Sbjct: 571 MLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 630
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + M + E D+ Y +++ +A + F EM P +
Sbjct: 631 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCIC 690
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPE 149
L+ +L EA++ + ++ + E
Sbjct: 691 LLREYYKRGQLDEAIELKNEMERMAYSFE 719
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 2/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN L+D CK +V+ A+++ M + P++ +Y+ L++G + +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L EV EMK G PD +Y +I+ C A + +EA ++ R M + C P ++ +
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ +L EA + + +K+ P+ TYN V+ C +I +A ++D+M++ G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 181 -IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ P+ TY V++ L K+ EA + RM K G P V TY ++ C +++
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMC-KAGCNPDVVTYTTIIDGLCKCGRLEE 356
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + MK G P + Y+TLI+ LC K+D+A + +EM + G P ++ +
Sbjct: 357 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 416
Query: 300 ALRDEGMEETAVVLAQKI 317
L G + A L Q++
Sbjct: 417 GLCVSGRIKEAQQLVQRM 434
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 145/281 (51%), Gaps = 2/281 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ LID LCKS+ A+EV ++MK PD +Y+ L+ G + +
Sbjct: 157 GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEA 216
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ R M G PDVV Y +I+A C + + EA + +EM P + T+I+G
Sbjct: 217 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 276
Query: 125 LGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +++EA Q ++ G P+ TY+ V+ C S + +A +++D M K G P
Sbjct: 277 LCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 336
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY ++ L K GR EEA + + M R G P V TY ++ C +VD A R+
Sbjct: 337 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKR-AGCAPNVVTYTTLISGLCKARKVDEAERV 395
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+EM+ G P + Y+T++N LC ++ +A + Q M D
Sbjct: 396 MEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 436
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 151/301 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L +N L+D LCK V AQ+V KM + F P++ ++ L++G+ ++ N
Sbjct: 83 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 142
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M G P+VV+Y +I+ C ++++ EA E+ EM+A+ P +
Sbjct: 143 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSA 202
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL ++ EA Q + G P+ Y++++ A+C S ++ +A + + EMRK
Sbjct: 203 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 262
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ V+ L K G+ EA + +M P V TY V+ C + + A
Sbjct: 263 KSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 322
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ D M G P + Y+T+I+ LC +L++A Q M G P ++ L
Sbjct: 323 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 382
Query: 301 L 301
L
Sbjct: 383 L 383
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 158/324 (48%), Gaps = 2/324 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + + LI +++ +E A ++ ++M++R P++ +Y +L++ + + +
Sbjct: 51 MGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGA 110
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+V ++M + GF P+V+++ +++ C D+A +L M A +P+ + LI+
Sbjct: 111 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 170
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL ++ EA + + K G P+A TY+A++ C + +I +A +M+ M G P
Sbjct: 171 GLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 230
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ Y ++H K+G+ EA + M RK P V TY V+ C ++ A I
Sbjct: 231 DVVVYSSIIHAFCKSGKLLEAQKTLQEM-RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 289
Query: 244 WDEMKARG-VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
D+M+ G VLP + YST+IN LC D L +A K M G P ++ + L
Sbjct: 290 LDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC 349
Query: 303 DEGMEETAVVLAQKIDKLRKTPLV 326
G E A L Q + + P V
Sbjct: 350 KCGRLEEAEYLLQGMKRAGCAPNV 373
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ ++ +I CKS + AQ+ +M+K+R PD+ +Y +++G +
Sbjct: 223 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 282
Query: 61 LLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + +M++ G PDVV+Y +IN C + EA +L M C P +
Sbjct: 283 IAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYT 342
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+I+GL RL EA K+ G P TY ++ C + ++++A R+M+EMR
Sbjct: 343 TIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 402
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G PN TY+ +++ L +GR +EA + +RM + P +TY +V + V
Sbjct: 403 GCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQ 462
Query: 239 MAMRIWDEM 247
A ++ ++M
Sbjct: 463 EAEQLLEQM 471
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 4/259 (1%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E+ EMK GF PD ++ +I A +A D A++ R M C P+ + LI
Sbjct: 11 ELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAF 67
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
K+L EA++ + ++RG P TYN +V A C + A ++ +M + G PN
Sbjct: 68 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 127
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T++ ++ K G ++A + M K G P V TY ++ C + + A + +
Sbjct: 128 MTFNSLVDGFCKRGNVDDARKLLGIMVAK-GMRPNVVTYSALIDGLCKSQKFLEAKEVLE 186
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
EMKA GV P YS LI+ LC DK+++A + + M G P ++S++ A G
Sbjct: 187 EMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSG 246
Query: 306 MEETAVVLAQKIDKLRKTP 324
A Q++ K RK+P
Sbjct: 247 KLLEAQKTLQEMRKQRKSP 265
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L AL+ + K GF P+A T+ ++ A + ++ A MD +R G PN TY
Sbjct: 6 LHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTA 62
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ +A + EEA + + M R+ G P + TY ++V C + V A + +M
Sbjct: 63 LIAAFARAKKLEEAMKLLEEM-RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG 121
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
G P + +++L++ C +DDA K M+ G+RP +S L L
Sbjct: 122 GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 172
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 157/310 (50%), Gaps = 3/310 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
F L+D+LCK HV A E F++ ++ F+P I++Y IL+ GW + + L ++ E
Sbjct: 233 FEILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFE 292
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
MK + P VV+YG +I +C + + A+EL EM +P+ ++ +++ LG R
Sbjct: 293 MKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGR 352
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
EAL + P TYN++V YC + ++ A +++ M G P TY+
Sbjct: 353 FKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNY 412
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
K G+ EE+ S++ +M G P TY ++++M C ++++A+++ +EMKAR
Sbjct: 413 FFRFFSKYGKIEESMSLYNKMIES-GYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKAR 471
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G + + L++ LC K ++A F+ M+ GI P F L G+ + A
Sbjct: 472 GFDMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMA 531
Query: 311 VVLAQKIDKL 320
L + + +
Sbjct: 532 SKLQEMMSSV 541
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 101/224 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ +N ++D L ++ + A + ++ P I +Y L++G+ + +
Sbjct: 328 MRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGD 387
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ + M GF P +Y + +E++ L+ +M + P +
Sbjct: 388 LSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAPDKLTYHL 447
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L E+RL+ A+Q + K RGF+ + T ++ C + +A+ + M G
Sbjct: 448 LLKMLCEEERLNLAVQVCNEMKARGFDMDLATSTMLMHLLCKMHKFEEAFAEFEHMIHRG 507
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
I P T+ + +K G T+ A + + MS P +E TY
Sbjct: 508 IVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSSVPHSEKLPDTY 551
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 113/297 (38%), Gaps = 81/297 (27%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEA------------------VELF-----REMEA 108
K GF P + +IN ++ +D A VE+F R A
Sbjct: 146 KKSGFRPSAALFNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARA 205
Query: 109 TNCKPSPHIF---CTL--INGLGS-------------EKRLSEALQFFGQSKKRG--FEP 148
+P+ + C L I+G GS E + A ++F + ++ G FEP
Sbjct: 206 GMVQPAIRTYEFACNLETISGTGSEGLFEILLDSLCKEGHVRVASEYFNRKREMGSSFEP 265
Query: 149 EAPTYNAVVG-----------------------------------AYCWSMRINDAYRMM 173
YN ++ YC + A ++
Sbjct: 266 SIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELV 325
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR-MSRKPGTEPTVSTYEIVVRMFC 232
DEMR+ GI PN Y+ ++ L +AGR +EA + +R M + G PT+STY +V+ +C
Sbjct: 326 DEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQG--PTISTYNSLVKGYC 383
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ A +I M RG P Y+ K++++ + +M++ G P
Sbjct: 384 KAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAP 440
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 45/265 (16%)
Query: 106 MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
++ T PS + + + S + +L F +KK GF P A +N ++ S
Sbjct: 111 LDRTGIVPSSSLLEAVFDHFDSSPKFLHSL-FLWAAKKSGFRPSAALFNRLINVLAKSRE 169
Query: 166 INDAYRMMDEMRKCG-----------------------IGPNTRTYD------------- 189
+ A+ ++ + G + P RTY+
Sbjct: 170 FDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTYEFACNLETISGTGS 229
Query: 190 -----IVLHHLIKAGRTEEAYSVFKRMSRKPGT--EPTVSTYEIVVRMFCYNAQVDMAMR 242
I+L L K G A F R R+ G+ EP++ Y I++ + + ++ A R
Sbjct: 230 EGLFEILLDSLCKEGHVRVASEYFNR-KREMGSSFEPSIRAYNILINGWFRSRKLKHAQR 288
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+W EMK + P + Y TLI C ++ A + EM GI P +++ + AL
Sbjct: 289 LWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALG 348
Query: 303 DEGMEETAVVLAQKIDKLRKTPLVD 327
+ G + A+ + ++ L + P +
Sbjct: 349 EAGRFKEALGMMERFMVLEQGPTIS 373
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 166/318 (52%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + FN L+ L K A++VFDKM + + PD++SYT L+ W +N
Sbjct: 288 MRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARN 346
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V+ EM + G +PDVV + MI +R EAV++F M+A P+ +
Sbjct: 347 LVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTM 406
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + ++ A++ F + ++ +P+ TY ++ Y + +++ +++EM + G
Sbjct: 407 LIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKG 466
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR-MFCYNAQVDM 239
P+ RTY+ ++ L ++A ++K+M +K G EPT+ TY ++++ F ++ M
Sbjct: 467 CPPDARTYNALIKLLTNRNMPDDAARIYKKMIKK-GLEPTIHTYNMMMKSYFVGDSNYAM 525
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W+EM RG+ P ++ Y+ IN + ++A KY +EM++ G++ P ++
Sbjct: 526 GCAVWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAA 585
Query: 300 ALRDEGMEETAVVLAQKI 317
G + LAQK+
Sbjct: 586 DFSKAGKPDILFELAQKV 603
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 131/280 (46%), Gaps = 3/280 (1%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+Y +L G+ + SM + +EM G + ++ + I + +A AV +F M
Sbjct: 230 TYCKMLHILGKTRQFESMVAMIQEMGKAG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELM 288
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
F L+ L E EA Q F + + + P+ +Y A++ A+C + +
Sbjct: 289 RKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARNL 347
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A R+ +EM + G+ P+ ++ ++ L++ R EA +F+ M K G P V TY +
Sbjct: 348 VEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAK-GPPPNVWTYTM 406
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++R C ++DMAM ++EM+ P + Y+ L+ + ++D +EM G
Sbjct: 407 LIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKG 466
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
P + ++ L + L + M + A + +K+ K P +
Sbjct: 467 CPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTI 506
>gi|224099459|ref|XP_002311493.1| predicted protein [Populus trichocarpa]
gi|222851313|gb|EEE88860.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 96/139 (69%), Gaps = 21/139 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSR-HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M+KFGLK E D NRL+DTL + +RA I +E WGQ+K
Sbjct: 1 MEKFGLKIESSDVNRLLDTLWLVQVEADRA--------------------ITIESWGQEK 40
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
NL + EVY EMKD+GFEPDVV+YG++INA C +RYD+A+ELF EMEA NCKPSPHI C
Sbjct: 41 NLSRLIEVYNEMKDEGFEPDVVTYGVLINARCKVRRYDDAIELFLEMEARNCKPSPHIHC 100
Query: 120 TLINGLGSEKRLSEALQFF 138
LINGLG+EKRLSEAL+FF
Sbjct: 101 ILINGLGAEKRLSEALEFF 119
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%)
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I G EK LS ++ + + K GFEP+ TY ++ A C R +DA + EM
Sbjct: 33 IESWGQEKNLSRLIEVYNEMKDEGFEPDVVTYGVLINARCKVRRYDDAIELFLEMEARNC 92
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
P+ + I+++ L R EA F+
Sbjct: 93 KPSPHIHCILINGLGAEKRLSEALEFFE 120
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
V+ M + G EP V TY +++ C + D A+ ++ EM+AR P H++ LIN L
Sbjct: 48 VYNEM-KDEGFEPDVVTYGVLINARCKVRRYDDAIELFLEMEARNCKPSPHIHCILINGL 106
Query: 267 CHEDKLDDACKYFQ 280
E +L +A ++F+
Sbjct: 107 GAEKRLSEALEFFE 120
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ N LI++ C R + A V K+ K PD ++ L+ G +
Sbjct: 138 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 197
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + +GF+PDVV+YG ++N C A+ L R M NC+P+ + T
Sbjct: 198 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 257
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++++EA F + +G P+ TYN+++ A C +++EM
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 317
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + V+ L K G A+ V M ++ G EP V TY ++ C +++D A
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR-GVEPDVVTYTALMDGHCLRSEMDEA 376
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M +G +P + Y+ LIN C ++D A ++M G+ ++ L
Sbjct: 377 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 436
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A+ L ++ + P
Sbjct: 437 LCHVGRLQHAIALFHEMVASGQIP 460
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 14/311 (4%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P FN L D L F++M P +T LL + K+ ++ + +
Sbjct: 88 PHFNTLDDALSS----------FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQ 137
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M G PDV + I+IN+ C +R A + ++ C+P F TLI GL E +
Sbjct: 138 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 197
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ EAL F ++ GF+P+ TY ++ C + A R++ M + PN Y+
Sbjct: 198 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 257
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L K + EA+++F M K G P + TY ++ C + + +EM
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 316
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDEGMEE 308
++P + ++ST++++LC E + A M+ G+ P ++ L LR E M+E
Sbjct: 317 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE-MDE 375
Query: 309 TAVVLAQKIDK 319
V + K
Sbjct: 376 AVKVFDTMVHK 386
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 125/270 (46%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID+LCK R V A +F +M + PDI +Y L+ + + EM
Sbjct: 255 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 314
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ P+VV + +++A C A ++ M +P + L++G +
Sbjct: 315 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD 374
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ F +G P +YN ++ YC R++ A ++++M G+ +T TY+ ++
Sbjct: 375 EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 434
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L GR + A ++F M G P + TY I++ C N + AM + ++ +
Sbjct: 435 HGLCHVGRLQHAIALFHEMVAS-GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 493
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ +Y+ I+ +C +L+ A F +
Sbjct: 494 DADILVYNIAIDGMCRAGELEAARDLFSNL 523
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ ++D LCK + A +V D M KR +PD+ +YT L++G + + +V+ M
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V SY I+IN +C +R D+A+ L +M + TLI+GL RL
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 444
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+ F + G P+ TY ++ C + + +A ++ + + + Y+I +
Sbjct: 445 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 504
Query: 193 HHLIKAGRTEEAYSVFKRMS 212
+ +AG E A +F +S
Sbjct: 505 DGMCRAGELEAARDLFSNLS 524
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ ++ + L+D C ++ A +VFD M + P+++SY IL+ G+ Q +
Sbjct: 348 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 407
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M G D V+Y +I+ C R A+ LF EM A+ P +
Sbjct: 408 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 467
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L++ L L+EA+ + + + YN + C
Sbjct: 468 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 508
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 63/142 (44%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N LI+ C+ + +++A + ++M + D +Y L+ G L
Sbjct: 387 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 446
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G PD+V+Y I+++ C EA+ L + +E +N ++ I+G
Sbjct: 447 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDG 506
Query: 125 LGSEKRLSEALQFFGQSKKRGF 146
+ L A F +GF
Sbjct: 507 MCRAGELEAARDLFSNLSCQGF 528
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 148/291 (50%), Gaps = 4/291 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L+D CK + A + F +M R PD+ +YT ++ G+ Q +++ +
Sbjct: 771 LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 830
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ EM G EPD++++ ++N +C A +A + M C P+ + TLI+GL
Sbjct: 831 LFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 890
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
E L A + + K G +P TYN++V C S I +A +++ E G+ +T
Sbjct: 891 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 950
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ K+G ++A + M K G +PT+ T+ +++ FC + ++ ++ +
Sbjct: 951 TYTTLMDAYCKSGEMDKAQEILTEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1009
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
M A+G+ P ++ L+ C + L A +++M G+ P G+ + NL
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENL 1060
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 145/313 (46%), Gaps = 3/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + +I LC+ + A+E F +M + PD YT L++G+ ++ +
Sbjct: 730 MKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ + EM PDV++Y +I+ C EA +LF EM +P F
Sbjct: 790 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE 849
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG + +A + + G P TY ++ C ++ A ++ EM K G
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +++ L K+G EEA + G TY ++ +C + ++D A
Sbjct: 910 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKA 968
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--K 298
I EM +G+ P + ++ L+N C L+D K ML GI P F+ L +
Sbjct: 969 QEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQ 1028
Query: 299 QALRDEGMEETAV 311
+R+ TA+
Sbjct: 1029 YCIRNNLKAATAI 1041
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 153/323 (47%), Gaps = 4/323 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ ++ F L++ CK+ H++ A V + M + P++ +YT L++G ++ +L S
Sbjct: 839 GLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 898
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
NE+ EM G +P++ +Y ++N C + +EAV+L E EA + TL++
Sbjct: 899 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 958
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A + + +G +P T+N ++ +C + D ++++ M GI PN
Sbjct: 959 YCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1018
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ + A +++K M + G EP TYE +V+ C + A ++
Sbjct: 1019 ATTFNCLVKQYCIRNNLKAATAIYKDMCSR-GVEPDGKTYENLVKGHCNARNMKEAWFLF 1077
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EMK +G + YS LI K +A + F +M G+ ++F
Sbjct: 1078 QEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKG 1137
Query: 305 GMEETAVVLAQKIDKLRKTPLVD 327
+T V ID++ + LVD
Sbjct: 1138 KRPDTIV---DPIDEIIENYLVD 1157
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 149/316 (47%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I +C+ + A + M+ + + PD+ SY+ ++ G+ + L +
Sbjct: 664 GVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKV 723
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +MK G +P+ +YG +I C + EA E F EM P ++ TL++G
Sbjct: 724 WKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDG 783
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ A +FF + R P+ TY A++ +C + +A ++ EM G+ P+
Sbjct: 784 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPD 843
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ +++ KAG ++A+ V M + G P V TY ++ C +D A +
Sbjct: 844 IITFTELMNGYCKAGHIKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELL 902
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM G+ P + Y++++N LC +++A K E G+ ++ L A
Sbjct: 903 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 962
Query: 305 G-MEETAVVLAQKIDK 319
G M++ +L + + K
Sbjct: 963 GEMDKAQEILTEMLGK 978
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 1/252 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + LID LCK ++ A E+ +M K P+I +Y ++ G + N
Sbjct: 870 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 929
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ E + G D V+Y +++A+C + D+A E+ EM +P+ F
Sbjct: 930 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNV 989
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG L + + +G P A T+N +V YC + A + +M G
Sbjct: 990 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRG 1049
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +TY+ ++ A +EA+ +F+ M K G +VSTY ++++ F + A
Sbjct: 1050 VEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGK-GFSVSVSTYSVLIKGFFKRKKFVEA 1108
Query: 241 MRIWDEMKARGV 252
I+D+M+ G+
Sbjct: 1109 REIFDQMRRDGL 1120
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 2/313 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN-LLSMNEVYREM 71
F+ L + + A++VF+KM + S + L + N + V+RE
Sbjct: 601 FDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF 660
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G +V SY I+I+ C R +EA L ME P + T+ING L
Sbjct: 661 PEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGEL 720
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ + + K++G +P + TY +++G C ++ +A EM GI P+T Y +
Sbjct: 721 DKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTL 780
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ K G A F M + T P V TY ++ FC + A +++ EM RG
Sbjct: 781 VDGFCKRGDIRAASKFFYEMHSRDIT-PDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ P + ++ L+N C + DA + M+ G P ++ L L EG ++A
Sbjct: 840 LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899
Query: 312 VLAQKIDKLRKTP 324
L ++ K+ P
Sbjct: 900 ELLHEMWKIGLQP 912
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 159/305 (52%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ LCK ++ERA ++ ++M + + PD +Y +L G + + + + M
Sbjct: 152 YNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMP 211
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G+ PDVV+Y +++A + DEA++LF+++ A P + +++ GL + +
Sbjct: 212 SRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMD 271
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + G P TY+ V+ +C + +++DA+++++EM K G P+ TY+I+L
Sbjct: 272 EAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 331
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K ++A+ +F M G P + +Y +V+ C +V A ++D M R +
Sbjct: 332 DGLCKTNLVDKAHELFSTMVDN-GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 390
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P + ++ L++ LC KLD+A +M G P ++ L LR +G A
Sbjct: 391 VPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADR 450
Query: 313 LAQKI 317
L Q +
Sbjct: 451 LTQAM 455
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 157/327 (48%), Gaps = 21/327 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++N LID K V+ A ++++M +P I +Y LL + ++ +
Sbjct: 38 GISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEA 97
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE-LFREMEATNCKPSPHIFCTLIN 123
E+++ M + GFEPDVV+Y +I+ C + EA+E LF +M C + + LIN
Sbjct: 98 MELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALIN 157
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL ++ + A + + +G+ P+ TYN ++ C ++++A + D M G P
Sbjct: 158 GLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 217
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ Y+ +L L K G+T+EA +FK + K G P TY ++ + +D A +
Sbjct: 218 DVVAYNGLLDALYKEGKTDEAMKLFKDVIAK-GYMPDTVTYNSILLGLARKSNMDEAEEM 276
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ +M A G P YS +++ C K+DDA K +EM IG P ++ L
Sbjct: 277 FKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNIL------ 330
Query: 304 EGMEETAVVLAQKIDKLRKTPLVDRGQ 330
+D L KT LVD+
Sbjct: 331 -------------LDGLCKTNLVDKAH 344
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 151/292 (51%), Gaps = 6/292 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M GL+ + +N L++ CK ++ A E+F M ++ F+PD+ +Y+ ++ G G+
Sbjct: 69 MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
L M ++ +M + G + V+Y +IN C + + A +L EM + P
Sbjct: 129 VTEALEM--LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNIT 186
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+++GL ++SEA QFF RG+ P+ YN ++ A + ++A ++ ++
Sbjct: 187 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G P+T TY+ +L L + +EA +FK+M G P +TY IV+ C +V
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV-ASGCAPNGATYSIVLSGHCRAKKV 305
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D A ++ +EM G +P + Y+ L++ LC + +D A + F M+D G P
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 145/284 (51%), Gaps = 2/284 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F ++ + CK + ++F++M PD Y IL++G+ ++ + N +Y EM
Sbjct: 11 FRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMV 70
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP + +Y ++NA C + EA+ELF+ M +P + T+I+GL +++
Sbjct: 71 SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVT 130
Query: 133 EALQ-FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EAL+ F + +RG YNA++ C I AY++++EM G P+ TY+ +
Sbjct: 131 EALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTI 190
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L L + G+ EA F M + G P V Y ++ + D AM+++ ++ A+G
Sbjct: 191 LSGLCRMGKVSEAKQFFDSMPSR-GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+P Y++++ L + +D+A + F++M+ G P G +S
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYS 293
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 153/317 (48%), Gaps = 3/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQE-VFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M + G + ++ ++ +I LCK+ V A E +F KM +R + +Y L+ G + +
Sbjct: 104 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDE 163
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
N+ ++ EM G+ PD ++Y +++ C + EA + F M + P +
Sbjct: 164 NIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN 223
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L++ L E + EA++ F +G+ P+ TYN+++ +++A M +M
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN TY IVL +A + ++A+ V + MS K G P V TY I++ C VD
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMS-KIGAVPDVVTYNILLDGLCKTNLVDK 342
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ M G P + YS ++N LC +K+ DA F M++ + P F+ L
Sbjct: 343 AHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMD 402
Query: 300 ALRDEG-MEETAVVLAQ 315
L G ++E +L Q
Sbjct: 403 GLCKAGKLDEAKDLLDQ 419
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 145/273 (53%), Gaps = 3/273 (1%)
Query: 39 RRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDE 98
R P+ ++ ++L+ + +Q L +++ +M D+G PD + Y I+I+ + R DE
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
A L+ EM + +PS + + +L+N E ++ EA++ F ++GFEP+ TY+ ++
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 159 AYCWSMRINDAYRMM-DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
C + ++ +A M+ +M + G NT Y+ +++ L K E AY + + M+ K G
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK-GY 180
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P TY ++ C +V A + +D M +RG P + Y+ L+++L E K D+A K
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEET 309
F++++ G P ++++ L R M+E
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 273
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N L+D L K + A ++F + + + PD +Y +L G ++ N+
Sbjct: 214 GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 273
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++++M G P+ +Y I+++ HC AK+ D+A ++ EM P + L++G
Sbjct: 274 EEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDG 333
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +A + F G P+ +Y+ V+ C + +++DA + D M + + P+
Sbjct: 334 LCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 393
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I++ L KAG+ +EA + +M+ G P Y ++ + A R+
Sbjct: 394 VVTFNILMDGLCKAGKLDEAKDLLDQMTC-SGCAPDYVAYNTLMNGLRKQGRHIQADRLT 452
Query: 245 DEMKARGVL 253
MK +G L
Sbjct: 453 QAMKEKGFL 461
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 2/241 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P+ ++ +++ + C + + +LF +M P + LI+G + R+ EA +
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ + G EP TYN+++ A+C ++ +A + M + G P+ TY ++ L K
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 198 AGRTEEAYS-VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
G+ EA +F +M + + TV+ Y ++ C + ++ A ++ +EM ++G +P
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVA-YNALINGLCKDENIERAYKLLEEMASKGYVPDN 184
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
Y+T+++ LC K+ +A ++F M G P ++ L AL EG + A+ L +
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244
Query: 317 I 317
+
Sbjct: 245 V 245
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
++ +PD FN L+D LCK+ ++ A+++ D+M PD +Y L+ G +Q +
Sbjct: 388 RKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQ 447
Query: 64 MNEVYREMKDDGFEPD 79
+ + + MK+ GF D
Sbjct: 448 ADRLTQAMKEKGFLSD 463
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ N LI++ C R + A V K+ K PD ++ L+ G +
Sbjct: 176 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + +GF+PDVV+YG ++N C A+ L R M NC+P+ + T
Sbjct: 236 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 295
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++++EA F + +G P+ TYN+++ A C +++EM
Sbjct: 296 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 355
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + V+ L K G A+ V M ++ G EP V TY ++ C +++D A
Sbjct: 356 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR-GVEPDVVTYTALMDGHCLRSEMDEA 414
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M +G +P + Y+ LIN C ++D A ++M G+ ++ L
Sbjct: 415 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 474
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A+ L ++ + P
Sbjct: 475 LCHVGRLQHAIALFHEMVASGQIP 498
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ ++D LCK + A +V D M KR +PD+ +YT L++G + + +V+ M
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V SY I+IN +C +R D+A+ L +M + TLI+GL RL
Sbjct: 423 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 482
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+ F + G P+ TY ++ C + + +A ++ + + + Y+I +
Sbjct: 483 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 542
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ +AG E A +F +S K G +P V TY I++ C +D A +++ +M G
Sbjct: 543 DGMCRAGELEAARDLFSNLSSK-GLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGC 601
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+Y+T+I ++ A + QEML G + + + L D+G++++
Sbjct: 602 SRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQS 658
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 36/320 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQKNLLS--- 63
+N +ID+LCK R V A +F +M + PDI +Y L+ W LL+
Sbjct: 293 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 352
Query: 64 --------------------------MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD 97
++V M G EPDVV+Y +++ HC D
Sbjct: 353 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD 412
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
EAV++F M C P+ + LING +R+ +A+ Q +G + TYN ++
Sbjct: 413 EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 472
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
C R+ A + EM G P+ TY I+L +L K EA + K +
Sbjct: 473 HGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAI-EGSNL 531
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+ + Y I + C +++ A ++ + ++G+ P + Y+ +I+ LC LD+A K
Sbjct: 532 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANK 591
Query: 278 YFQEMLDIGIRPPGQLFSNL 297
F++M + G G +++ +
Sbjct: 592 LFRKMDENGCSRDGCIYNTI 611
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 14/311 (4%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P FN L D L F++M P +T LL + K+ ++ + +
Sbjct: 126 PHFNTLDDALSS----------FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQ 175
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M G PDV + I+IN+ C +R A + ++ C+P F TLI GL E +
Sbjct: 176 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 235
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ EAL F ++ GF+P+ TY ++ C + A R++ M + PN Y+
Sbjct: 236 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 295
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L K + EA+++F M K G P + TY ++ C + + +EM
Sbjct: 296 IIDSLCKDRQVTEAFNLFSEMITK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 354
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDEGMEE 308
++P + ++ST++++LC E + A M+ G+ P ++ L LR E M+E
Sbjct: 355 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE-MDE 413
Query: 309 TAVVLAQKIDK 319
V + K
Sbjct: 414 AVKVFDTMVHK 424
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 128/275 (46%), Gaps = 2/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ ++ + L+D C ++ A +VFD M + P+++SY IL+ G+ Q +
Sbjct: 386 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 445
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M G D V+Y +I+ C R A+ LF EM A+ P +
Sbjct: 446 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 505
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L L+EA+ + + + YN + C + + A + + G
Sbjct: 506 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 565
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ RTY+I++H L K G +EA +F++M G Y ++R F + + A
Sbjct: 566 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN-GCSRDGCIYNTIIRGFLRSNETFGA 624
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
++ EM A G + +TLI + +D LD +
Sbjct: 625 TQLLQEMLAEGFSADVST-TTLIVEMLSDDGLDQS 658
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 162/311 (52%), Gaps = 7/311 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + + F L+D L K+ V+ A +F++++ R+ P +K +T LL GW ++
Sbjct: 192 MPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELR-YRWKPSVKHFTSLLYGWCKEGK 250
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V +MKD G EPD+V Y ++ + A + +A +L +EM C+P+ +
Sbjct: 251 LMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTV 310
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L +RL EA + F + ++ G + + TY+ ++ +C +I Y ++DEM + G
Sbjct: 311 LIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQG 370
Query: 181 IGPNTRTYD-IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
PN Y I++ H K E V + +K G P +S Y V+R+ C +V
Sbjct: 371 HFPNQVIYQHIMVAHEKKEELEECKELVNE--MQKIGCAPDLSIYNTVIRLACKLGEVKE 428
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP---GQLFSN 296
+R+W+EM++ G+ P + + +IN + L +AC+YF+EM+ G+ G L
Sbjct: 429 GVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTLKEL 488
Query: 297 LKQALRDEGME 307
+ LR E +E
Sbjct: 489 MNSLLRAEKLE 499
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 150/318 (47%), Gaps = 7/318 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI---KSYTILLEGWGQQKNLLSMNEVYR 69
+ +I L + R + ++M R+ +P + + + IL+ + + + +V
Sbjct: 133 YKAMIKVLSRMRQFGAVWALIEEM--RQENPHLITPQVFVILMRRFASARMVHKAVQVLD 190
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM + G EPD +G +++A EA LF E+ KPS F +L+ G E
Sbjct: 191 EMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELR-YRWKPSVKHFTSLLYGWCKEG 249
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L EA Q K G EP+ YN ++G Y + ++ DAY ++ EMR+ G PN +Y
Sbjct: 250 KLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYT 309
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ L K R EEA VF M R G + + TY ++ FC ++ + DEM
Sbjct: 310 VLIQSLCKHERLEEATRVFVEMQRN-GCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQ 368
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G P +Y ++ + +++L++ + EM IG P +++ + + G +
Sbjct: 369 QGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKE 428
Query: 310 AVVLAQKIDKLRKTPLVD 327
V L +++ +P +D
Sbjct: 429 GVRLWNEMESSGLSPSID 446
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 134/270 (49%), Gaps = 9/270 (3%)
Query: 34 DKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS---YGIMINAH 90
K R D D +Y +++ + + ++ + EM+ + P +++ + I++
Sbjct: 121 SKQSGHRLDHD--AYKAMIKVLSRMRQFGAVWALIEEMRQEN--PHLITPQVFVILMRRF 176
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
SA+ +AV++ EM C+P ++F L++ L + EA F + + R ++P
Sbjct: 177 ASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYR-WKPSV 235
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
+ +++ +C ++ +A ++ +M+ GI P+ Y+ +L +A + +AY + K
Sbjct: 236 KHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKE 295
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M RK G EP ++Y ++++ C + +++ A R++ EM+ G + YSTLI+ C
Sbjct: 296 MRRK-GCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWG 354
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
K+ + EM+ G P ++ ++ A
Sbjct: 355 KIKRGYELLDEMIQQGHFPNQVIYQHIMVA 384
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 151/298 (50%), Gaps = 2/298 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ +N +ID LCK+R +++A+ V +M PD +Y+ ++ G+
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGR 350
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++REMK G P++V+ + + C R EA E F M A KP +CT
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT 410
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G SE ++ + F K G + ++ AY ++DA + EM++ G
Sbjct: 411 LLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY V+ + GR +A F +M + G +P + Y +++ FC + + A
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR-GIQPNTAVYSSIIQGFCMHGGLVKA 529
Query: 241 MRIWDEMKARGV-LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ EM +G+ P + +S++INSLC + ++ DA F DIG RP F++L
Sbjct: 530 KELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSL 587
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 157/322 (48%), Gaps = 4/322 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR--RFDPDIKSYTILLEGWGQQ 58
M + G ++ ++ LC + +RA ++ M K+ PD+ +Y+ ++ G+ +
Sbjct: 219 MSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNE 278
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ EM G +PDVV+Y ++I+A C A+ D+A + R+M +P +
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTY 338
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+G + RL EA + F + KKRG P T N+ + + C R +A D M
Sbjct: 339 SCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTA 398
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G P+ +Y +LH G + +F M + G + I++ + VD
Sbjct: 399 KGHKPDIFSYCTLLHGYASEGCFADMIGLFNSM-KSNGIAANCHVFTILIHAYAKRGMVD 457
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM I+ EM+ +GV P + YST+I++ +L DA + F +M+ GI+P ++S++
Sbjct: 458 DAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSII 517
Query: 299 QAL-RDEGMEETAVVLAQKIDK 319
Q G+ + ++++ I+K
Sbjct: 518 QGFCMHGGLVKAKELVSEMINK 539
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 138/279 (49%), Gaps = 2/279 (0%)
Query: 28 RAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMI 87
+A +F +M ++ PD+ +Y ++++ + + + V R+M DG +PD V+Y MI
Sbjct: 283 KACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMI 342
Query: 88 NAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
+ + + R EA ++FREM+ P+ + + L R EA +FF +G +
Sbjct: 343 HGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHK 402
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P+ +Y ++ Y D + + M+ GI N + I++H K G ++A +
Sbjct: 403 PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLI 462
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
F M ++ G P V TY V+ F ++ AM +++M ARG+ P +YS++I C
Sbjct: 463 FTEMQQQ-GVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFC 521
Query: 268 HEDKLDDACKYFQEMLDIGI-RPPGQLFSNLKQALRDEG 305
L A + EM++ GI RP FS++ +L +G
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDG 560
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 156/313 (49%), Gaps = 9/313 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ ++ +I T + + A E F++M R P+ Y+ +++G+
Sbjct: 466 MQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGG 525
Query: 61 LLSMNEVYREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L+ E+ EM + G PD+V + +IN+ C R +A ++F +P F
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFN 585
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI+G ++ +A + + G EP+ TYN ++ Y + RIND + EM++
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRK 645
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PNT TY I+L L +AGRT A F M + GT TVS Y I++ C N D
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMI-ESGTTVTVSIYGIILGGLCRNNCADE 704
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP----GQLFS 295
A+ ++ ++ V + + +T+IN++ + ++A + F + G+ P G +
Sbjct: 705 AIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMII 764
Query: 296 NLKQALRDEGMEE 308
NL L+D G+E+
Sbjct: 765 NL---LKDGGVED 774
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 153/355 (43%), Gaps = 35/355 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + N + +LCK + A E FD M + PDI SY LL G+ +
Sbjct: 361 MKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGC 420
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
M ++ MK +G + + I+I+A+ D+A+ +F EM+ P + T
Sbjct: 421 FADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYST 480
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ RL++A++ F Q RG +P Y++++ +C + A ++ EM G
Sbjct: 481 VISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKG 540
Query: 181 IG-PNTRTYDIVLHHLIKAGRTEEAYSVF---KRMSRKPGT------------------- 217
I P+ + V++ L K GR +A+ +F + +PG
Sbjct: 541 IPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKA 600
Query: 218 ------------EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
EP + TY ++ + N +++ + ++ EM+ +GV P Y ++
Sbjct: 601 FKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG 660
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
L + A K F EM++ G ++ + L + A++L QK+ +
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTM 715
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 149/326 (45%), Gaps = 7/326 (2%)
Query: 5 GLKQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPD-IKSYTILLEGWGQQKN 60
G + +P F N L+D C++R + +F + + D I + T+L +
Sbjct: 149 GTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRT 208
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIF 118
++N + M + G P+ VSY I++ A C A++L + M + C P +
Sbjct: 209 EEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAY 268
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
T+I+G +E +A F + ++G +P+ TYN ++ A C + ++ A ++ +M
Sbjct: 269 STVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT 328
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G P+T TY ++H GR +EA +F+ M +K G P + T + C + +
Sbjct: 329 DGAQPDTVTYSCMIHGYATLGRLKEAAKMFREM-KKRGLIPNIVTCNSFLASLCKHGRSK 387
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +D M A+G P + Y TL++ E D F M GI +F+ L
Sbjct: 388 EAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILI 447
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP 324
A GM + A+++ ++ + +P
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSP 473
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 10/284 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID C +++A ++ D M+ +PDI +Y LL+G+ + + ++REM+
Sbjct: 584 FNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ 643
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+ V+YGIM+ A R A + F EM + + I+ ++ GL
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD 703
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ F + + N ++ A R +A + + G+ PN TY +++
Sbjct: 704 EAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+L+K G E+A ++F M K G P ++RM ++ A ++ + +
Sbjct: 764 INLLKDGGVEDANNMFSSM-EKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRI 822
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
L S +++ + K +QE DI + P F N
Sbjct: 823 LLEASTTSLMLSLFSRKGK-------YQE--DIKLLPAKYQFFN 857
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 146/281 (51%), Gaps = 2/281 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ LID LCKS+ A+EV ++MK R PD +Y+ L+ G + +
Sbjct: 279 GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEA 338
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ R M G PDVV Y +I+A C + + EA + +EM P + T+I+G
Sbjct: 339 EQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDG 398
Query: 125 LGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +++EA Q ++ G P+ TY+ V+ C S + +A +++D M K G P
Sbjct: 399 LCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNP 458
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY ++ L K GR EEA + + M R G P V TY ++ C +VD A R+
Sbjct: 459 DVVTYTTIIDGLCKCGRLEEAEYLLQGMKRA-GCAPNVVTYTTLISGLCKARKVDEAERV 517
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+EM+ G P + Y+T++N LC ++ +A + Q M D
Sbjct: 518 MEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 558
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 160/318 (50%), Gaps = 2/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN L+D CK +V+ A+++ M + P++ +Y+ L++G + +
Sbjct: 240 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 299
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L EV EMK G PD +Y +I+ C A + +EA ++ R M + C P ++ +
Sbjct: 300 FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ +L EA + + +K+ P+ TYN V+ C +I +A ++++M++ G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 181 -IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ P+ TY V++ L K+ EA + RM K G P V TY ++ C +++
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMC-KAGCNPDVVTYTTIIDGLCKCGRLEE 478
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + MK G P + Y+TLI+ LC K+D+A + +EM + G P ++ +
Sbjct: 479 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 538
Query: 300 ALRDEGMEETAVVLAQKI 317
L G + A L Q++
Sbjct: 539 GLCVSGRIKEAQQLVQRM 556
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 150/301 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L +N L+D LCK V AQ+V KM + F P++ ++ L++G+ ++ N
Sbjct: 205 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 264
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M G P+VV+Y +I+ C ++++ EA E+ EM+ P +
Sbjct: 265 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSA 324
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL ++ EA Q + G P+ Y++++ A+C S ++ +A + + EMRK
Sbjct: 325 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 384
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ V+ L K G+ EA + ++M P V TY V+ C + + A
Sbjct: 385 KSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 444
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ D M G P + Y+T+I+ LC +L++A Q M G P ++ L
Sbjct: 445 QKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISG 504
Query: 301 L 301
L
Sbjct: 505 L 505
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 159/324 (49%), Gaps = 2/324 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + + LI +++ +E A ++ ++M++R P++ +Y +L++ + + +
Sbjct: 173 MGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGA 232
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+V ++M + GF P+V+++ +++ C D+A +L M A +P+ + LI+
Sbjct: 233 AQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALID 292
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL ++ EA + + K RG P+A TY+A++ C + +I +A +M+ M G P
Sbjct: 293 GLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTP 352
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ Y ++H K+G+ EA + M RK P V TY V+ C ++ A I
Sbjct: 353 DVVVYSSIIHAFCKSGKLLEAQKTLQEM-RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 411
Query: 244 WDEMKARG-VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++M+ G VLP + YST+IN LC D L +A K M G P ++ + L
Sbjct: 412 LEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC 471
Query: 303 DEGMEETAVVLAQKIDKLRKTPLV 326
G E A L Q + + P V
Sbjct: 472 KCGRLEEAEYLLQGMKRAGCAPNV 495
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 151/320 (47%), Gaps = 4/320 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G +N L+ L + + A ++F +PD+ SY I++ G+ +L +
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ EMK GF PD ++ +I A +A D A++ R M C P+ + LI
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAA 188
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K+L EA++ + ++RG P TYN +V A C + A ++ +M + G PN
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ K G ++A + M K G P V TY ++ C + + A +
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAK-GMRPNVVTYSALIDGLCKSQKFLEAKEVL 307
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+EMK RGV P YS LI+ LC DK+++A + + M G P ++S++ A
Sbjct: 308 EEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKS 367
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G A Q++ K RK+P
Sbjct: 368 GKLLEAQKTLQEMRKQRKSP 387
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 2/251 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ ++ +I CKS + AQ+ +M+K+R PD+ +Y +++G +
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 404
Query: 61 LLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + +M++ G PDVV+Y +IN C + EA +L M C P +
Sbjct: 405 IAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYT 464
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+I+GL RL EA K+ G P TY ++ C + ++++A R+M+EMR
Sbjct: 465 TIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 524
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS-RKPGTEPTVSTYEIVVRMFCYNAQVD 238
G PN TY+ +++ L +GR +EA + +RM + P +TY +V + V
Sbjct: 525 GCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQ 584
Query: 239 MAMRIWDEMKA 249
A ++ ++MK+
Sbjct: 585 EAEQLLEQMKS 595
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + LI LCK+R V+ A+ V ++M+ P++ +Y ++ G
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545
Query: 61 LLSMNEVYREMKDDGFE--PDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
+ ++ + MKD E PD +Y ++NA S+ EA +L +M++T
Sbjct: 546 IKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKSTT 597
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 166/321 (51%), Gaps = 1/321 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G++Q++ + LI+ C V+ V K+ K +P I ++T LL G + +
Sbjct: 91 LGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQ 150
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ +Y +M G +P+V +Y ++IN+ + + +EA+ ++ME C P+ + TLI+
Sbjct: 151 VMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLID 210
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G ++ EA F +G P TY +++ YC RI +A +++DE + G+ P
Sbjct: 211 GYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVP 270
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ T+ ++ L +AGR A +F+ + G P + TY +++ C + ++ A +
Sbjct: 271 DIVTFTTIISGLCRAGRPLAAQQLFRYICAH-GHTPNIMTYGVLLDGLCKHGNLEEAFAL 329
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ EM+ V P + +Y+ LI+SLC K+ D + F ++D G++P ++ L AL
Sbjct: 330 FQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCK 389
Query: 304 EGMEETAVVLAQKIDKLRKTP 324
EG+ A L +K+++ TP
Sbjct: 390 EGLIIEAHKLFRKMEEDGCTP 410
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 145/287 (50%), Gaps = 1/287 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GL+ + F L++ LC +++ ++D M R P++ +Y +++ +
Sbjct: 125 KLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKAN 184
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++M+ G P+VV+Y +I+ +C + DEA +F M + C P+ + + +L+
Sbjct: 185 EALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLM 244
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NG +R+ EA+Q ++ ++G P+ T+ ++ C + R A ++ + G
Sbjct: 245 NGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHT 304
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY ++L L K G EEA+++F+ M R +P + Y I++ C ++
Sbjct: 305 PNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST-VKPNLVIYTILIDSLCKCGKIKDGKE 363
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ + G+ P ++ Y+ L+ +LC E + +A K F++M + G P
Sbjct: 364 LFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTP 410
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 1/296 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A F M R+ P I ++ L + + ++ + +E++ G E D+ S I+IN
Sbjct: 46 ALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILIN 105
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C R D + + ++ +PS F TL+NGL E ++ + + + RG +P
Sbjct: 106 CFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQP 165
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TYN ++ + S + N+A + +M K G PN Y ++ G+ +EA SVF
Sbjct: 166 NVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVF 225
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K G P V TY ++ +C +++ A+++ DE +G++P + ++T+I+ LC
Sbjct: 226 DLMVSK-GCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCR 284
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ A + F+ + G P + L L G E A L Q++ + P
Sbjct: 285 AGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKP 340
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 122/251 (48%), Gaps = 1/251 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G + +++ LID C ++ A+ VFD M + P++ +YT L+ G+ + +
Sbjct: 193 MEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIER 252
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ E G PD+V++ +I+ C A R A +LFR + A P+ +
Sbjct: 253 IEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGV 312
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL L EA F + ++ +P Y ++ + C +I D + + G
Sbjct: 313 LLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEG 372
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ L K G EA+ +F++M + G P Y ++++ F + MA
Sbjct: 373 LKPNVYTYTALVGALCKEGLIIEAHKLFRKM-EEDGCTPDKCAYNVIIQGFLQHKDPSMA 431
Query: 241 MRIWDEMKARG 251
++ +EM RG
Sbjct: 432 RQLVEEMVNRG 442
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 12/271 (4%)
Query: 65 NEVYREMKDDGFE-----------PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
N+V+ + KDD P +V + + ++ Y+ V L +E+E +
Sbjct: 36 NKVWFKDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQ 95
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
H LIN R+ L + K G EP T+ ++ C +++ +
Sbjct: 96 DIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLY 155
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
D+M G+ PN TY+++++ L K+G+ EA K+M K G P V Y ++ +C
Sbjct: 156 DDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQM-EKVGCVPNVVNYSTLIDGYCL 214
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
Q+D A ++D M ++G P ++ Y++L+N C +++++A + E L G+ P
Sbjct: 215 RGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVT 274
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+ + L G A L + I TP
Sbjct: 275 FTTIISGLCRAGRPLAAQQLFRYICAHGHTP 305
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ F +I LC++ AQ++F + P+I +Y +LL+G + NL
Sbjct: 267 GLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEA 326
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ +P++V Y I+I++ C + + ELF + KP+ + + L+
Sbjct: 327 FALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGA 386
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E + EA + F + ++ G P+ YN ++ + + A ++++EM G +
Sbjct: 387 LCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446
Query: 185 TRT 187
T
Sbjct: 447 AAT 449
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + + L+ LCK + A ++F KM++ PD +Y ++++G+ Q K+
Sbjct: 372 GLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMA 431
Query: 65 NEVYREMKDDGFEPDVVSYGIM 86
++ EM + GF D + ++
Sbjct: 432 RQLVEEMVNRGFSADAATRALL 453
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 146/272 (53%), Gaps = 1/272 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI TLCK VE A E+ + + PD+ ++ L++G +N E++ EM+
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD +Y ++I++ CS + DEA+ + ++ME + C S + TLI+G ++
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIR 487
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + + G + TYN ++ C S R+ DA ++MD+M G P+ TY+ +L
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H + G ++A + + M+ G EP + TY ++ C +V++A ++ ++ +G+
Sbjct: 548 THFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
H Y+ +I L + K +A F+EML+
Sbjct: 607 ALTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 147/283 (51%), Gaps = 2/283 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G+K ++ FN LI LC++ + A + + M PD K++T +++G+ ++ +
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGD 239
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC-KPSPHIFC 119
L + +M + G VS ++++ C R ++A+ +EM + P + F
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TL+NGL + A++ + G++P+ TYN+V+ C + +A +D+M
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITR 359
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
PNT TY+ ++ L K + EEA + + ++ K G P V T+ +++ C +
Sbjct: 360 DCSPNTVTYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFNSLIQGLCLTRNHRV 418
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
AM +++EM+++G P Y+ LI+SLC + KLD+A ++M
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +I LCK V+ A E D+M R P+ +Y L+ ++ +
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ R + G PDV ++ +I C + + A+ELF EM + C+P + LI+
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L S+ +L EAL Q + G TYN ++ +C + +I +A + DEM G+ N
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRN 504
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY+ ++ L K+ R E+A + +M + G +P TY ++ FC + A I
Sbjct: 505 SVTYNTLIDGLCKSRRVEDASQLMDQMIME-GQKPDKFTYNSLLTHFCRGGDIKKAADIV 563
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M + G P + Y TLI+ LC +++ A K + + GI ++ + Q L
Sbjct: 564 QAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGL 620
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 146/298 (48%), Gaps = 2/298 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQK 59
M +FG N ++ CK VE A +M + F PD ++ L+ G +
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
++ E+ M +G++PDV +Y +I+ C EAVE +M +C P+ +
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYN 369
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TLI+ L E ++ EA + +G P+ T+N+++ C + A + +EMR
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ TY++++ L G+ +EA ++ K+M G +V TY ++ FC ++
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-GCARSVITYNTLIDGFCKANKIRE 488
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A I+DEM+ GV Y+TLI+ LC +++DA + +M+ G +P +++L
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSL 546
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 136/322 (42%), Gaps = 12/322 (3%)
Query: 4 FGLKQELPDFN-------RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWG 56
F L + P+F+ ++ L +S + +++ + MK + + IL+E +
Sbjct: 70 FNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYA 129
Query: 57 Q---QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
Q Q +L + V+ + D G +PD Y M+N +M KP
Sbjct: 130 QFELQDEILGV--VHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKP 187
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
F LI L +L A+ G P+ T+ ++ Y ++ A R+
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIR 247
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
++M + G + + ++++H K GR E+A + + MS + G P T+ +V C
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
V A+ I D M G P ++ Y+++I+ LC ++ +A ++ +M+ P
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVT 367
Query: 294 FSNLKQALRDEGMEETAVVLAQ 315
++ L L E E A LA+
Sbjct: 368 YNTLISTLCKENQVEEATELAR 389
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 121/264 (45%), Gaps = 4/264 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID+LC ++ A + +M+ + +Y L++G+ + + E++ EM+
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEME 497
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + V+Y +I+ C ++R ++A +L +M KP + +L+ +
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIK 557
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A G EP+ TY ++ C + R+ A +++ ++ GI Y+ V+
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVI 617
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ-VDMAMRIWDEMKARG 251
L + +T EA ++F+ M + P +Y IV R C + A+ E+ +G
Sbjct: 618 QGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKG 677
Query: 252 VLP---VMHMYSTLINSLCHEDKL 272
+P ++M + + +L E+ L
Sbjct: 678 FVPEFSSLYMLAEGLLTLSMEETL 701
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 2/185 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + +N LID LCKSR VE A ++ D+M PD +Y LL + + +
Sbjct: 496 MEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGD 555
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + M +G EPD+V+YG +I+ C A R + A +L R ++ +PH +
Sbjct: 556 IKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNP 615
Query: 121 LINGLGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYC-WSMRINDAYRMMDEMRK 178
+I GL +++ +EA+ F + ++ P+A +Y V C I +A + E+ +
Sbjct: 616 VIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675
Query: 179 CGIGP 183
G P
Sbjct: 676 KGFVP 680
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + + +N LID CK+ + A+E+FD+M+ + +Y L++G + +
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +M +G +PD +Y ++ C +A ++ + M + C+P + T
Sbjct: 521 VEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKC 179
LI+GL R+ A + + +G YN V+ + +A + EM +
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 180 GIGPNTRTYDIVLHHLIKAG 199
P+ +Y IV L G
Sbjct: 641 EAAPDAVSYRIVFRGLCNGG 660
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 1/186 (0%)
Query: 121 LINGLGSEKRLSEALQFFG-QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L++ L S+ S AL+ F SKK F PE Y ++ S +D +++++M+
Sbjct: 53 LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G T + I++ + +E V M G +P Y ++ + + +
Sbjct: 113 GCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKL 172
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+M G+ P + ++ LI +LC +L A ++M G+ P + F+ + Q
Sbjct: 173 VEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ 232
Query: 300 ALRDEG 305
+EG
Sbjct: 233 GYIEEG 238
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 155/302 (51%), Gaps = 1/302 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ +N ++ LCK+ V+ A EV++ ++ + D+ + + L++G + +
Sbjct: 437 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 496
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ REM+ +G PDVV+Y I+I+ C A + D+++ F EM C P+ +
Sbjct: 497 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 556
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L R+ + +RG P+A Y +V+ C S ++AY + M++ G
Sbjct: 557 VIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY++++ L K R +EA + + M G P TY V F +A+ D A
Sbjct: 617 CAPTVVTYNVLVDKLCKVSRLDEAIHLLEVM-ESDGCLPDTVTYNSVFDGFWKSAEHDKA 675
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ MK+RG P MYS L+ L E+K+D A + ++E L+ G ++ L+Q
Sbjct: 676 FRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTLQQN 735
Query: 301 LR 302
R
Sbjct: 736 KR 737
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 155/289 (53%), Gaps = 2/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI+ CK+R ++A + D+M+KR P Y +++G + S YR+M+
Sbjct: 170 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 229
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ P V++Y I+++A C + R +A + +M C P+ + TLING +
Sbjct: 230 RNC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 288
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ F Q + P+ TYN ++ YC R D +++ EM K G PN TY+ ++
Sbjct: 289 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 348
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K+G+ +A+++ + M R+ +P+ T+ +++ MFC Q+D+A ++ M RG
Sbjct: 349 DSLVKSGKYIDAFNLAQMMLRR-DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 407
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
LP ++ Y+ +I+ C +++DDA + + M + G P ++++ L
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 456
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 175/379 (46%), Gaps = 50/379 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LI+ CK +++ A +F++M + PD+ +Y IL++G+ +Q+
Sbjct: 262 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQER 321
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +EM G EP+ ++Y ++++ + +Y +A L + M +CKPS F
Sbjct: 322 PQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNL 381
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ +L A + F RG P+ TYN ++ C + RI+DA ++++ M + G
Sbjct: 382 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 441
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFK------------------------------- 209
P+ TY+ ++ L KA + +EAY V++
Sbjct: 442 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 501
Query: 210 ---RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
R + G+ P V Y I++ FC Q+D ++ + EM +G +P + YS +I+ L
Sbjct: 502 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 561
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSN----------------LKQALRDEGMEETA 310
C ++ D C + ML+ G+ P ++++ L + ++ G T
Sbjct: 562 CKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTV 621
Query: 311 VVLAQKIDKLRKTPLVDRG 329
V +DKL K +D
Sbjct: 622 VTYNVLVDKLCKVSRLDEA 640
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 153/298 (51%), Gaps = 4/298 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N +I C++ ++ A+++ ++M + PD+ +Y ++ G + + E
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 467
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
VY +++ G+ DVV+ +I+ C ++R D+A +L REME P + LI+G
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+L ++L FF + +G P TY+ V+ C S R+ D ++ M + G+ P+
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y V+ L K+ +EAY ++K M ++ G PTV TY ++V C +++D A+ + +
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLM-KQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEV 646
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M++ G LP Y+++ + + D A + FQ M G P ++S L L E
Sbjct: 647 MESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAE 704
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 163/380 (42%), Gaps = 53/380 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G+ +N +I LC + V+ A + M+ R P + +YTIL++ +
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSAR 251
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +M + G P+VV+Y +IN C DEAV LF +M +C P +
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 311
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV------------------------ 156
LI+G ++R + + + K G EP TYN +
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371
Query: 157 -----------VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+ +C +++ AY + M G P+ TY+I++ +A R ++A
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 431
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ +RM+ + G P V TY +V C +QVD A +++ ++ G + STLI+
Sbjct: 432 QLLERMT-EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 490
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA----------------LRDEGMEET 309
LC +LDDA K +EM G P ++ L + D+G T
Sbjct: 491 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 550
Query: 310 AVVLAQKIDKLRKTPLVDRG 329
+ + IDKL K+ V G
Sbjct: 551 VITYSIVIDKLCKSARVRDG 570
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 2/245 (0%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
LL + ++K ++++ + PD ++Y +IN C A+ + +A L EME
Sbjct: 138 LLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 197
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
P ++ T+I GL R+ AL + + +R P TY +V A C S RI+DA
Sbjct: 198 IVPHNAVYNTIIKGLCDNGRVDSALVHY-RDMQRNCAPSVITYTILVDALCKSARISDAS 256
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++++M + G PN TY+ +++ K G +EA +F +M P V TY I++
Sbjct: 257 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN-SCSPDVFTYNILIDG 315
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+C + ++ EM G P Y+TL++SL K DA Q ML +P
Sbjct: 316 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 375
Query: 291 GQLFS 295
F+
Sbjct: 376 HFTFN 380
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 8/244 (3%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G++ + +++A K+ EA +LF+ C P + TLING + +A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA---YRMMDEMRKCGIGPNTRTYDIV 191
+ + +KRG P YN ++ C + R++ A YR D R C P+ TY I+
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYR--DMQRNC--APSVITYTIL 242
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K+ R +A + + M + G P V TY ++ FC +D A+ ++++M
Sbjct: 243 VDALCKSARISDASLILEDMI-EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENS 301
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+ LI+ C +++ D K QEM+ G P ++ L +L G A
Sbjct: 302 CSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAF 361
Query: 312 VLAQ 315
LAQ
Sbjct: 362 NLAQ 365
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 47/111 (42%)
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
++A F + +PG + + T ++ F + A ++ + P YST
Sbjct: 113 DKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYST 172
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
LIN C A + EM GI P +++ + + L D G ++A+V
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 223
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 166/318 (52%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + FN L+ L K A++VFDKM + + PD++SYT L+ W +N
Sbjct: 288 MRKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARN 346
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V+ EM + G +PDVV + MI +R EAV++F M+A P+ +
Sbjct: 347 LVEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTM 406
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + ++ A++ F + ++ +P+ TY ++ Y + +++ +++EM + G
Sbjct: 407 LIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKG 466
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR-MFCYNAQVDM 239
P+ RTY+ ++ L ++A ++K+M +K G EPT+ TY ++++ F ++ M
Sbjct: 467 CPPDARTYNALIKLLTNRNMPDDAARIYKKMIKK-GLEPTIHTYNMMMKSYFVGDSNYAM 525
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W+EM RG+ P ++ Y+ IN + ++A KY +EM++ G++ P ++
Sbjct: 526 GCAVWEEMHQRGICPDVNSYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAA 585
Query: 300 ALRDEGMEETAVVLAQKI 317
G + LAQK+
Sbjct: 586 DFSKAGKPDILFELAQKV 603
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 131/280 (46%), Gaps = 3/280 (1%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+Y +L G+ + SM + +EM G + ++ + I + +A AV +F M
Sbjct: 230 TYCKMLHILGKTRQFESMVAMIQEMGKAG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELM 288
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
F L+ L E EA Q F + + + P+ +Y A++ A+C + +
Sbjct: 289 RKNGFDDGVESFNCLLVALAKEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARNL 347
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A R+ +EM + G+ P+ ++ ++ L++ R EA +F+ M K G P V TY +
Sbjct: 348 VEAGRVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAK-GPPPNVWTYTM 406
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++R C ++DMAM ++EM+ P + Y+ L+ + ++D +EM G
Sbjct: 407 LIRDHCKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKG 466
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
P + ++ L + L + M + A + +K+ K P +
Sbjct: 467 CPPDARTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTI 506
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 145/271 (53%), Gaps = 1/271 (0%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGF 76
+ T CK V+ A+ VF M K+ F P++ +Y+ L++G+ K + ++ M G
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
PD+ SY I+IN C K D A+ LF EM P+ + +LI+GL ++S AL+
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
+ RG P+ TY++++ A C + + A ++ +++ G+ PN TY I+++ L
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLC 405
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K GR E+A ++F+ + K G V+TY +++ +FC N A+ + +M+ G +P
Sbjct: 406 KGGRPEDAQNIFEDLLVK-GYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNA 464
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
Y +I SL +D+ D A K EM+ G+
Sbjct: 465 VTYEIIIRSLFDKDENDKAEKLLLEMITRGL 495
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 105/211 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ +N LI+ CK + + A +F++M R+ P++ +Y L++G +
Sbjct: 280 MAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGK 339
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM D G PD+++Y +++A C D+A+ L +++ +P+ + +
Sbjct: 340 ISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTI 399
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL R +A F +G+ TY ++ +C + +A M+ +M + G
Sbjct: 400 LINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENG 459
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
PN TY+I++ L ++A + M
Sbjct: 460 CIPNAVTYEIIIRSLFDKDENDKAEKLLLEM 490
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 1/233 (0%)
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
++ C + EA +F M KP+ + +L++G K +++A F + G
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P+ +YN ++ +C + A + +EM I PN TY+ ++ L K+G+ A
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ M + G P + TY ++ C N D A+ + ++K +G+ P M+ Y+ LIN L
Sbjct: 346 LVDEMHDR-GQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGL 404
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
C + +DA F+++L G ++ + + GM A+ + K+++
Sbjct: 405 CKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEE 457
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 1/163 (0%)
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
A V +C ++ +A + M K G PN TY ++ +A S+F M++
Sbjct: 224 APVSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQG 283
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P + +Y I++ FC D AM +++EM R ++P + Y++LI+ LC K+
Sbjct: 284 -GVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISY 342
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
A K EM D G P +S+L AL + A+ L K+
Sbjct: 343 ALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKL 385
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K G+ +EA +VF M +K G +P V TY ++ +C +V+ A I++ M GV P +
Sbjct: 231 KEGKVKEAKNVFAAMMKK-GFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDI 289
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
Y+ LIN C D A F+EM I P +++L L G A+ L
Sbjct: 290 QSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKL--- 346
Query: 317 IDKLRKTPLVDRGQ 330
+D++ DRGQ
Sbjct: 347 VDEMH-----DRGQ 355
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 153/282 (54%), Gaps = 2/282 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ FN L+D CK ++ + VF M K+ P++ +Y L++G+ K +
Sbjct: 263 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAK 322
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ M G PD+ SY I+I+ C K+ DEA+ LF+EM + P + +LI+GL
Sbjct: 323 SILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGL 382
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++S AL+ + RG P+ TY++++ A C + +++ A ++ +++ GI PN
Sbjct: 383 CKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNM 442
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY I++ L K GR E+A+++F+ + K G TV+TY +++ FC D A+ +
Sbjct: 443 YTYTILIDGLCKGGRLEDAHNIFEDLLVK-GYNITVNTYTVMIHGFCNKGLFDEALALLS 501
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+MK +P Y +I SL +D+ D A K +EM+ G+
Sbjct: 502 KMKDNSCIPDAVTYEIIIRSLFDKDENDKAEK-LREMITRGL 542
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 155/306 (50%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + LI LCK A ++ ++ P++ Y+ +++G + K++
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y EM G P+VV+Y +I+ + + +A++LF +M N KP + F L++G
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ E F K+G +P TY +++ YC +N A ++ M + G+ P+
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPD 336
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++Y+I++ K + +EA ++FK M K P V TY ++ C ++ A+++
Sbjct: 337 IQSYNILIDGFCKIKKVDEAMNLFKEMHHK-HIIPDVVTYNSLIDGLCKLGKISYALKLV 395
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM RGV P + YS+++++LC ++D A ++ D GIRP ++ L L
Sbjct: 396 DEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKG 455
Query: 305 GMEETA 310
G E A
Sbjct: 456 GRLEDA 461
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 157/305 (51%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +ID +CK +HV A +++ +M + P++ +Y+ L+ G+ L +++ +M
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 259
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ +PDV ++ I+++ C + E +F M KP+ +C+L++G K ++
Sbjct: 260 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVN 319
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A +RG P+ +YN ++ +C ++++A + EM I P+ TY+ ++
Sbjct: 320 KAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLI 379
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K G+ A + M + G P + TY ++ C N QVD A+ + ++K +G+
Sbjct: 380 DGLCKLGKISYALKLVDEMHDR-GVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGI 438
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P M+ Y+ LI+ LC +L+DA F+++L G ++ + ++G+ + A+
Sbjct: 439 RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALA 498
Query: 313 LAQKI 317
L K+
Sbjct: 499 LLSKM 503
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 144/305 (47%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F LI LC + +A D + F D Y L+ G + + ++ R +
Sbjct: 130 FTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVD 189
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ +P+VV Y +I+ C K ++A +L+ EM + P+ + LI+G + +L
Sbjct: 190 GNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLK 249
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ F + +P+ T+N +V +C ++ + + M K GI PN TY ++
Sbjct: 250 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 309
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+A S+ MS++ G P + +Y I++ FC +VD AM ++ EM + +
Sbjct: 310 DGYCLVKEVNKAKSILYTMSQR-GVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI 368
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P + Y++LI+ LC K+ A K EM D G+ P +S++ AL + A+
Sbjct: 369 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 428
Query: 313 LAQKI 317
L K+
Sbjct: 429 LLTKL 433
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 154/315 (48%), Gaps = 1/315 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ LI ++ A ++F+KM PD+ ++ IL++G+ + +
Sbjct: 227 GISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEG 286
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G +P+VV+Y +++ +C K ++A + M P + LI+G
Sbjct: 287 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDG 346
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K++ EA+ F + + P+ TYN+++ C +I+ A +++DEM G+ P+
Sbjct: 347 FCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPD 406
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L L K + ++A ++ ++ + G P + TY I++ C +++ A I+
Sbjct: 407 IITYSSILDALCKNHQVDKAIALLTKL-KDQGIRPNMYTYTILIDGLCKGGRLEDAHNIF 465
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+++ +G ++ Y+ +I+ C++ D+A +M D P + + ++L D+
Sbjct: 466 EDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDK 525
Query: 305 GMEETAVVLAQKIDK 319
+ A L + I +
Sbjct: 526 DENDKAEKLREMITR 540
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 161/353 (45%), Gaps = 39/353 (11%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKM----------------KKRRFDPDIKSYTILLEGW 55
+FN+++ +L KS+H + +M + + P+ ++T L++G
Sbjct: 78 EFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGL 137
Query: 56 ---GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
GQ L ++ M GF+ D V YG +I+ C A++L R ++ +
Sbjct: 138 CLKGQIHQALLFHDNVVAM---GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQ 194
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ ++ T+I+G+ +K +++A + + +G P TY+A++ + ++ DA +
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDL 254
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
++M I P+ T++I++ K G+ +E +VF M K G +P V TY ++ +C
Sbjct: 255 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM-MKQGIKPNVVTYCSLMDGYC 313
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+V+ A I M RGV P + Y+ LI+ C K+D+A F+EM I P
Sbjct: 314 LVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVV 373
Query: 293 LFSNLKQAL----------------RDEGMEETAVVLAQKIDKLRKTPLVDRG 329
+++L L D G+ + + +D L K VD+
Sbjct: 374 TYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKA 426
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 97/234 (41%), Gaps = 18/234 (7%)
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKR------LSEALQFFGQS---------- 141
+A LF + N P F ++ L K LS+ ++F G +
Sbjct: 59 DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPH 118
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+ G+ P T+ ++ C +I+ A D + G + Y ++H L K G T
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGET 178
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
A + +R+ +P V Y ++ C + V+ A ++ EM ++G+ P + YS
Sbjct: 179 RAALDLLRRVDGNL-VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 237
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLA 314
LI+ +L DA F +M+ I+P F+ L +D M+E V A
Sbjct: 238 LISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFA 291
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 153/298 (51%), Gaps = 2/298 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ +N +ID LCK+R +++A+ V +M PD +Y ++ G+
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGR 350
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++R+MK G P++V + + C R EA E+F M A KP +CT
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G SE ++ + F K G + +N ++ AY ++DA + EM++ G
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY V+ + GR +A F +M + G +P + Y +++ FC + + A
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR-GIQPNTAVYHSIIQGFCMHGGLVKA 529
Query: 241 MRIWDEMKARGV-LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ EM +G+ P + ++++INSLC + ++ DA F + DIG RP F++L
Sbjct: 530 KELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSL 587
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 156/322 (48%), Gaps = 4/322 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR--RFDPDIKSYTILLEGWGQQ 58
M + G + ++ ++ LC + +RA ++F M K P++ +Y ++ G+ ++
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ EM G +PDVV+Y ++I+A C A+ D+A + R+M +P +
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+G + RL EA + F + K RG P N+ + + C R +A + D M
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G P+ +Y +LH G + +F M + G + I++ + VD
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSM-KSNGIAADCRVFNILIHAYAKRGMVD 457
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM I+ EM+ +GV P + YST+I++ +L DA + F +M+ GI+P ++ ++
Sbjct: 458 DAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSII 517
Query: 299 QAL-RDEGMEETAVVLAQKIDK 319
Q G+ + ++++ I+K
Sbjct: 518 QGFCMHGGLVKAKELVSEMINK 539
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 145/294 (49%), Gaps = 2/294 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I K +A +F +M ++ PD+ +Y ++++ + + + V R+M
Sbjct: 268 YNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMT 327
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G +PD V+Y MI+ + + R EA ++FR+M++ P+ I + + L R
Sbjct: 328 TNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSK 387
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F +G +P+ +Y ++ Y D + + M+ GI + R ++I++
Sbjct: 388 EAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILI 447
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H K G ++A +F M ++ G P V TY V+ F ++ AM +++M ARG+
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQ-GVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGI 506
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI-RPPGQLFSNLKQALRDEG 305
P +Y ++I C L A + EM++ GI RP F+++ +L +G
Sbjct: 507 QPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDG 560
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 157/357 (43%), Gaps = 37/357 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ ++ +I + + A E F++M R P+ Y +++G+
Sbjct: 466 MQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGG 525
Query: 61 LLSMNEVYREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L+ E+ EM + G PD+V + +IN+ C R +A ++F + +P F
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFT 585
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI+G ++ +A + + G E + TY+ ++ Y + RIND + EM++
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRK 645
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PNT TY I+L L +AGRT A F M + GT TVS Y I++ C N D
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMI-ESGTTVTVSIYGIILGGLCRNNCADE 704
Query: 240 AMRIWDEM-----------------------------------KARGVLPVMHMYSTLIN 264
A+ ++ ++ A G+LP Y +I
Sbjct: 705 AIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMII 764
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
+L + ++DA F M GI P +L + + + L ++G A K+D R
Sbjct: 765 NLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKR 821
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 146/315 (46%), Gaps = 4/315 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQKNLLSMNEVYREM 71
++ L+D C++R + +F + + I + T+L + ++N + M
Sbjct: 160 YSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRM 219
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIFCTLINGLGSEK 129
+ G P+V SY I++ C A++LF+ M E C P+ + T+I+G E
Sbjct: 220 SELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEG 279
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+A F + ++G +P+ TYN ++ A C + ++ A ++ +M G P+T TY+
Sbjct: 280 ETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYN 339
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++H GR +EA +F++M + G P + + C + + A I+D M A
Sbjct: 340 CMIHGYATLGRLKEAAKMFRKMKSR-GLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G P + Y TL++ E D F M GI ++F+ L A GM +
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDD 458
Query: 310 AVVLAQKIDKLRKTP 324
A+++ ++ + +P
Sbjct: 459 AMLIFTEMQQQGVSP 473
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 114/250 (45%), Gaps = 1/250 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + ++ F LID C +++A ++ D M+ + DI +Y+ LL+G+ + +
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND 634
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++REM+ G +P+ V+YGIM+ A R A + F EM + + I+ ++
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILG 694
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL EA+ F + + N ++ A R +A + + G+ P
Sbjct: 695 GLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLP 754
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY +++ +L+K G E+A ++F M K G P ++RM ++ A
Sbjct: 755 NESTYGVMIINLLKDGAVEDANNMFSSM-EKSGIVPGSRLLNRIIRMLLEKGEIAKAGNY 813
Query: 244 WDEMKARGVL 253
++ + +L
Sbjct: 814 LSKVDGKRIL 823
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 9/261 (3%)
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVV-SYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
G L N V RE P V +Y I+++ C A+R D + LF + T K
Sbjct: 132 GPALALALFNRVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIH 191
Query: 115 PHIFCTLINGLGSEKRLSEALQ-FFGQSKKRGFEPEAPTYNAVVGAYC---WSMRINDAY 170
TL+ L R EA+ + + G P +Y+ ++ C S R D +
Sbjct: 192 QITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLF 251
Query: 171 RMM-DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+MM E C PN Y+ V+H K G T +A S+F M+R+ G +P V TY +++
Sbjct: 252 QMMAKEGGAC--SPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQ-GVKPDVVTYNLIID 308
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C +D A + +M G P Y+ +I+ +L +A K F++M G+ P
Sbjct: 309 ALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIP 368
Query: 290 PGQLFSNLKQALRDEGMEETA 310
+ ++ +L G + A
Sbjct: 369 NIVICNSFLASLCKHGRSKEA 389
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
Q+ R TY+ ++ C + R + + + + G+ + T +L L A
Sbjct: 147 QAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYAN 206
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG--VLPVMH 257
RTEEA +V + G P V +Y I+++ C N+ A+ ++ M G P +
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVV 266
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQ 315
Y+T+I+ E + AC F EM G++P ++ + AL + M++ +VL Q
Sbjct: 267 AYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE--------AYSVFKRMSRK---P 215
+DA+ M DE+ + R+ + L L +A + A ++F R+ R+ P
Sbjct: 91 DDAHHMFDELFRQATPVPGRSLNGFLTALARATSSSACITDGPALALALFNRVCREQAGP 150
Query: 216 GTEP-TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
P TV TY I++ C + D+ + ++ + G+ STL+ LC+ ++ ++
Sbjct: 151 RVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEE 210
Query: 275 ACK-YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
A M ++G P +S + + L D M + A+ L Q + K
Sbjct: 211 AVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAK 256
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 154/299 (51%), Gaps = 1/299 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ +I+ LCK ++A +V + MK F P + +Y +++G+ + + + + +EM
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV 291
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+ +++ I+I+ C + A ++F EM+ +P+ + +LINGL S +L
Sbjct: 292 AKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD 351
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL + G +P TYNA++ +C + +A M+D++ K G+ PN T++ ++
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLI 411
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
KAGR ++A+ + + M G P VSTY ++ FC V A ++ EM+ G+
Sbjct: 412 DAYGKAGRMDDAF-LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGL 470
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ Y+ L+++LC + + A + EM ++G+ P ++ L EG A+
Sbjct: 471 KADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 162/343 (47%), Gaps = 40/343 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + +N +ID CK+ + +A + +M +R P+ ++ IL++G+ + +N
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +V+ EM+ G +P+VV+Y +IN CS + DEA+ L +M KP+ +
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING +K L EA + KRG P T+N ++ AY + R++DA+ + M G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ ++ + G +EA + K M G + + TY I+V C + A
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN-GLKADLVTYNILVDALCKKGETRKA 493
Query: 241 MRIWDEMKARGVLPV-----------------------------------MHMYSTLINS 265
+R+ DEM G+ P + Y+ LI
Sbjct: 494 VRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKG 553
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
C++ KL++A + EML+ G+ P + LRDE ME+
Sbjct: 554 FCNKGKLEEANRLLNEMLEKGLIPNRTTY----DILRDEMMEK 592
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 147/303 (48%), Gaps = 1/303 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ K+ ++ A E FD+ F S +L ++ + + VY+EM
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+VV++ ++IN C ++ +A ++ +M+A PS + T+I+G ++ +A
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + P T+N ++ +C + A ++ +EM++ G+ PN TY+ +++ L
Sbjct: 285 ALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGL 344
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
G+ +EA + +MS G +P V TY ++ FC + A + D++ RG+ P
Sbjct: 345 CSNGKLDEALGLQDKMSGM-GLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ ++TLI++ ++DDA MLD G+ P ++ L EG + A LA+
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463
Query: 316 KID 318
+++
Sbjct: 464 EME 466
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 35/234 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR--------------------R 40
M GLK + +N LI+ CK + ++ A+E+ D + KR R
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419
Query: 41 FD---------------PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
D P++ +Y L+ G+ ++ N+ ++ +EM+ +G + D+V+Y I
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+++A C +AV L EM PS + LI+G E + AL +K+G
Sbjct: 480 LVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
TYN ++ +C ++ +A R+++EM + G+ PN TYDI+ +++ G
Sbjct: 540 RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 130/289 (44%), Gaps = 23/289 (7%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRF--DPDIKSYTILLEGWGQQKN 60
+FG + F RL+ L +++ + + + D K + I +L WG +
Sbjct: 100 EFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANS 159
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ V+ +K+ E D+ G +D A + + A +C P
Sbjct: 160 IIVDMLVWAYVKNG--EMDLALEG-----------FDRAGDYGFRLSALSCNP------- 199
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ L E R+ + + +R T++ V+ C + A ++++M+ G
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ KAG+ +A ++ K M K P T+ I++ FC + V A
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR-IHPNEITFNILIDGFCRDENVTAA 318
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++++EM+ +G+ P + Y++LIN LC KLD+A +M +G++P
Sbjct: 319 KKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKP 367
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 165/324 (50%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ ++ +N LI L ++ + + M R F PD ++TIL++G ++
Sbjct: 1146 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 1205
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M+ G EPD+++Y ++N C + ++A +LF + K + +
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 1265
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING ++++ EA +FF + + +G +P TYN ++GA C S R+ A ++ EM+ CG
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TY ++L L K G EEA +F+ + +K +P + + I++ C +++ A
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSI-KKTEHKPNIEVFSILLDGMCRAGKLEEA 1384
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +DE+ G+ P Y+ LIN LC++ L +A K +M + G P F+ + Q
Sbjct: 1385 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 1444
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L E A+ L +++ +P
Sbjct: 1445 LLKENEIHEAIQLLEEMRNRNFSP 1468
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 162/327 (49%), Gaps = 2/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + + LI+ LCK+R A ++ +KMK D+ +Y ++++ +
Sbjct: 1042 MTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGM 1100
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ EM G PDVV Y +++ C R EA+E F+EME + + +
Sbjct: 1101 TTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNS 1160
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL E F RGF P+A T+ ++ C ++ +A ++++ MR G
Sbjct: 1161 LIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKG 1220
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ +++ L G+ E+A +F+ ++ + G + V +Y I++ +C + ++D A
Sbjct: 1221 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADR-GIKLNVFSYNILINGYCKDQKIDEA 1279
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R ++EM+ +G+ P Y+TLI +LC ++ A K F EM G + L
Sbjct: 1280 FRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDG 1339
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L G E A+ L Q I K P ++
Sbjct: 1340 LCKNGHLEEAMDLFQSIKKTEHKPNIE 1366
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 158/344 (45%), Gaps = 35/344 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++ G++ +L N LI C R V VF KR F+PD + T L++G +
Sbjct: 972 INDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENG 1031
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR------------------------- 95
+ +++ EM G D +YGI+IN C A++
Sbjct: 1032 IPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMI 1091
Query: 96 ---------YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
EA+++F EM P ++ +L++GL RL EAL+FF + + RG
Sbjct: 1092 IDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 1151
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+ TYN+++ + + ++ M G P+ T+ I++ L K G+ EA
Sbjct: 1152 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 1211
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ + M R G EP + TY ++ C Q++ A ++++ + RG+ + Y+ LIN
Sbjct: 1212 ILELM-RHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGY 1270
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
C + K+D+A ++F+EM G++P ++ L AL G TA
Sbjct: 1271 CKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTA 1314
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 157/348 (45%), Gaps = 36/348 (10%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K ++ + +ID LCK A ++F +M PD+ Y+ L++G + L E
Sbjct: 1082 KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 1141
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++EM+ G DV +Y +I+ A + E M P F LI+GL
Sbjct: 1142 FFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLC 1201
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNA------------------------------- 155
E ++ EA Q + +G EP+ TYN
Sbjct: 1202 KEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 1261
Query: 156 ----VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
++ YC +I++A+R +EMR G+ P+T TY+ ++ L ++GR A +F M
Sbjct: 1262 SYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 1321
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ G +STY +++ C N ++ AM ++ +K P + ++S L++ +C K
Sbjct: 1322 -QTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
L++A K F E+ G+ P ++ L L ++GM AV L ++++
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 1428
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 137/306 (44%), Gaps = 4/306 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVER--AQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
+K G K L F R + C+ ++ A ++FD+ P ++ LL +
Sbjct: 901 EKIGTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLG 960
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
++ +YR++ D G +PD+ + I+I+ CS + +F +P
Sbjct: 961 YYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVT 1020
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TL+ G+ E + +A+Q F + K+G +A TY ++ C + + A ++ ++M+
Sbjct: 1021 TLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN 1080
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G + TY +++ L K G T EA +F M G P V Y ++ C ++
Sbjct: 1081 CKG-DVFTYGMIIDALCKDGMTTEALDMFSEMI-GAGILPDVVVYSSLMDGLCRFGRLKE 1138
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ + EM+ RG+ ++ Y++LI+ L + + M+D G P F+ L
Sbjct: 1139 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILID 1198
Query: 300 ALRDEG 305
L EG
Sbjct: 1199 GLCKEG 1204
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G +L + L+D LCK+ H+E A ++F +KK P+I+ ++ILL+G +
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + E+ +G EPD ++Y I+IN C+ EAV+L +ME C P F
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+I L E + EA+Q + + R F P+
Sbjct: 1441 IIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 101/188 (53%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +N LI LC+S V AQ++F +M+ + +Y +LL+G + +L
Sbjct: 1290 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 1349
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++ +K +P++ + I+++ C A + +EA + F E+ +P + LING
Sbjct: 1350 MDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILING 1409
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ LSEA++ Q +++G P++ T+N ++ I++A ++++EMR P+
Sbjct: 1410 LCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469
Query: 185 TRTYDIVL 192
++L
Sbjct: 1470 EAVTSMLL 1477
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+++NDA ++ D P T T++ +L + K G + ++++++ G +P + T
Sbjct: 925 IKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKIN-DVGIQPDLYT 983
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
I++ C V ++ RG P +TL+ + E+ + DA + F EM
Sbjct: 984 LNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMT 1043
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
G+ + + L L A+ L +K+
Sbjct: 1044 KKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM 1077
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 148/285 (51%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N L+D LCK+ A+++FD M KR PDI +Y LL G+ + L+ M
Sbjct: 107 GIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEM 166
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M +G + D + I+I A+ ++ DE V +F +M P+ + T+I+G
Sbjct: 167 HDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDG 226
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL +A+ F Q +G P Y +++ A C + A ++ E+ GI PN
Sbjct: 227 LCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPN 286
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++ +L L K GR E+ +F + G P V TY ++ +C ++D AM++
Sbjct: 287 IVFFNTILDSLCKEGRVIESKKLFDLLGH-IGVNPDVITYSTLIDGYCLAGKMDGAMKLL 345
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M + G+ P YSTLIN C ++++DA F+EM G+ P
Sbjct: 346 TGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNP 390
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 151/297 (50%), Gaps = 5/297 (1%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ +N +ID L K V++A + +M RR PD +Y ++ + + + EV
Sbjct: 10 DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
M P+ +Y +++ +CS+ + ++A+ +FR+M + +P + +L++ L
Sbjct: 70 TVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ +EA + F KRG +P+ TY ++ Y + + + ++ M + G+ + +
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVF 185
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+I++ K + +E VF +M R+ G P Y V+ C ++D AM +++M
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKM-RQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+G+ P + +Y++LI++LC DK + A + E+LD GI P F+ + +L EG
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEG 301
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 132/262 (50%), Gaps = 5/262 (1%)
Query: 40 RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
R PD+ SY +++G ++ ++ Y EM D PD V+Y +I A A+ D A
Sbjct: 6 RCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRA 65
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+E+ M NC + ++++G S + +A+ F + G EP+ TYN+++
Sbjct: 66 MEVLTVMVMPNC----FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDY 121
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
C + + +A ++ D M K G+ P+ TY +LH G E + + M + G +
Sbjct: 122 LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN-GMQL 180
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
+ I++ + +VD + ++ +M+ +G+ P Y T+I+ LC +LDDA F
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240
Query: 280 QEMLDIGIRPPGQLFSNLKQAL 301
++M+D G+ P ++++L AL
Sbjct: 241 EQMIDKGLTPNVVVYTSLIHAL 262
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ +ID LCK ++ A F++M + P++ YT L+
Sbjct: 208 MRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDK 267
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ E+ D G P++V + ++++ C R E+ +LF + P + T
Sbjct: 268 WEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYST 327
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ A++ G +P++ TY+ ++ YC R+ DA + EM G
Sbjct: 328 LIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNG 387
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ P+ TY+I+LH L + RT A ++ R++ + GT+ +STY I++ F
Sbjct: 388 VNPDIITYNIILHGLFRTRRTAAAKELYARIT-ESGTQLELSTYNIILMDF 437
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 95/205 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI LC E+A+E+ ++ + +P+I + +L+ ++ ++
Sbjct: 247 GLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIES 306
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + G PDV++Y +I+ +C A + D A++L M + KP + TLING
Sbjct: 307 KKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLING 366
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
R+ +AL F + + G P+ TYN ++ + R A + + + G
Sbjct: 367 YCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLE 426
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFK 209
TY+I+L K + F+
Sbjct: 427 LSTYNIILMDFAKTNSLMMHFGCFR 451
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 6/206 (2%)
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
C P + T+I+GL E + +A + + R P+A TYN+++ A + ++ A
Sbjct: 7 CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++ M + PN TY+ ++H +G++E+A +F++M G EP V TY ++
Sbjct: 67 EVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSD-GIEPDVVTYNSLMDY 121
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C N + A +I+D M RG+ P + Y TL++ + L + M+ G++
Sbjct: 122 LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181
Query: 291 GQLFSNLKQA-LRDEGMEETAVVLAQ 315
+F+ L A + E ++E +V ++
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSK 207
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 7/251 (2%)
Query: 71 MKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
M DDG PDVVSY +I+ D+A + EM P + ++I L +
Sbjct: 1 MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ A++ P TYN+++ YC S + A + +M GI P+ TY+
Sbjct: 61 AMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ +L K G+ EA +F M ++ G +P ++TY ++ + + + M
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKR-GLKPDITTYGTLLHGYASKGALVEMHDLLALMVQ 175
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEE 308
G+ H+++ LI + ++K+D+ F +M G+ P + + L G +++
Sbjct: 176 NGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDD 235
Query: 309 TAVVLAQKIDK 319
+ Q IDK
Sbjct: 236 AMLNFEQMIDK 246
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 162/318 (50%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + FN L+ L + + A VFD+M+ + + PD++SYT L+ W +N
Sbjct: 298 MRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQ-YTPDLRSYTALMLAWCNARN 356
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V+ +M + G +PDVV + MI+ +R EAV++F M+A P+ +
Sbjct: 357 LVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTM 416
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + +L A++ F + + G +PE TY ++ Y + R++ M++EM + G
Sbjct: 417 LIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKG 476
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR-MFCYNAQVDM 239
P+ RTY+ ++ L ++A ++K+M K G EPT+ TY ++++ F M
Sbjct: 477 CPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITK-GLEPTIHTYNMMMKSYFLGGRNYAM 535
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W+EM +G+ P ++ Y+ IN + +ACK+ +EM+ G++ P ++
Sbjct: 536 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAA 595
Query: 300 ALRDEGMEETAVVLAQKI 317
G + LAQK+
Sbjct: 596 DFSKAGKPDILYELAQKV 613
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 38/280 (13%)
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-------------------EATNCKP 113
D FE V+Y M++ A++++ V L +EM A K
Sbjct: 231 SDEFEHTPVTYCKMLHILGKARQFETMVALVQEMGKAGALCMDAFKIAIKSFAAAGEIKN 290
Query: 114 SPHIF----------------CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ +F C L+ L E EA + F + + + + P+ +Y A++
Sbjct: 291 AVGVFEMMRVHGFDDGVESFNCLLV-ALAQEGLGKEAARVFDRMRDQ-YTPDLRSYTALM 348
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
A+C + + +A R+ ++M + G+ P+ ++ ++ L++ R EA +F+ M K G
Sbjct: 349 LAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAK-GP 407
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P V TY +++R C ++DMAMR ++EM+ G P + Y+ L+ + ++D
Sbjct: 408 PPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTA 467
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+EM G P G+ ++ L + L + M + AV + +K+
Sbjct: 468 MLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKM 507
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 78/204 (38%), Gaps = 36/204 (17%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI CK ++ A F++M+ P++ +YT LL G+G K + + + EM
Sbjct: 414 YTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMA 473
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF-------------- 118
G PD +Y +I + D+AV ++++M +P+ H +
Sbjct: 474 QKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNY 533
Query: 119 ----------------------CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
ING R +EA +F + ++G + YN
Sbjct: 534 AMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKF 593
Query: 157 VGAYCWSMRINDAYRMMDEMRKCG 180
+ + + + Y + +++ G
Sbjct: 594 AADFSKAGKPDILYELAQKVKFTG 617
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 161/299 (53%), Gaps = 4/299 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L+ +LCK ++ A++VFD M + +P++ SYTI+L G+ + L+ M +
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTD 380
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M DG PD+ ++ ++I A+ + D+A+ +F EM KP + T+I L
Sbjct: 381 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A++ F Q +G P+ Y+ ++ +C + A ++ E+ G+ +
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+ ++++L K GR +A ++F ++ G PT Y +++ +C +++ A+R++D
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFD-LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + G+ P +Y TL+N C ++D+ F+EML GI+P L++ + L + G
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 618
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 152/305 (49%), Gaps = 3/305 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEGWGQQKN 60
+ G ++ ++ L+ +LC +A ++ M + PD+ +Y+ +++G+ ++ +
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGD 234
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++EM G PD V+Y +++A C A+ D+A R+M P+ +
Sbjct: 235 VNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNN 294
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G S + EA++ F + ++ P+ T + ++G+ C +I +A + D M G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +Y I+L+ G + +F M G P + T+ ++++ + +D A
Sbjct: 355 QNPNVFSYTIMLNGYATKGCLVDMTDLFDLM-LGDGIAPDIYTFNVLIKAYANCGMLDKA 413
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M I++EM+ GV P + Y T+I +LC K+DDA + F +M+D G+ P + L Q
Sbjct: 414 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQG 473
Query: 301 LRDEG 305
G
Sbjct: 474 FCTHG 478
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 148/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ + +I LC+ ++ A E F++M + PD +Y L++G+ +
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+ E+ ++G D+V + +IN C R +A +F P+ ++
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ +AL+ F G EP Y +V YC RI++ + EM + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T Y+I++ L +AGRT A F M+ + G TY IV+R N D A
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT-ESGIAMNKCTYNIVLRGLFKNRCFDEA 658
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ E++A V + +T+I + ++++A F + G+ P +S +
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718
Query: 301 LRDEGMEETA 310
L EG+ E A
Sbjct: 719 LIKEGLVEEA 728
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 159/345 (46%), Gaps = 17/345 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + ++ ++ LCK+R +++A+ +M + P+ +Y L+ G+
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V++EM+ PDVV+ +++ + C + EA ++F M P+ +
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTI 364
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NG ++ L + F G P+ T+N ++ AY ++ A + +EMR G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY V+ L + G+ ++A F +M + G P Y +++ FC + + A
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ-GVAPDKYAYHCLIQGFCTHGSLLKA 483
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--- 297
+ E+ G+ + +S++IN+LC ++ DA F +++G+ P ++S L
Sbjct: 484 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG 543
Query: 298 -------KQALR------DEGMEETAVVLAQKIDKLRKTPLVDRG 329
++ALR G+E VV ++ K +D G
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 36/260 (13%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ F+ +I+ LCK V AQ +FD P Y++L++G+ +
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKA 553
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G EP+ V YG ++N +C R DE + LFREM KPS ++ +I+G
Sbjct: 554 LRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 613
Query: 125 LGSEKR-----------------------------------LSEALQFFGQSKKRGFEPE 149
L R EA+ F + + +
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
T N ++ + R+ +A + + + G+ P TY I++ +LIK G EEA +F
Sbjct: 674 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFS 733
Query: 210 RMSRKPGTEPTVSTYEIVVR 229
M + G EP VVR
Sbjct: 734 SM-QNAGCEPDSRLLNHVVR 752
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 136/329 (41%), Gaps = 45/329 (13%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+R RAQ R P +Y IL++ + + ++ G +++
Sbjct: 95 NRAASRAQ------GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIII 148
Query: 83 YGIMINAHCSAKRYDEAV------------------------------------ELFREM 106
++ C AKR DEA+ +L R M
Sbjct: 149 ANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMM 208
Query: 107 E--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
C P + T+I+G E +++A F + +RG P+ TY++VV A C +
Sbjct: 209 AEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKAR 268
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ A + +M G+ PN TY+ +++ G+ +EA VFK M R+ P V T
Sbjct: 269 AMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTL 327
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ C ++ A ++D M +G P + Y+ ++N + L D F ML
Sbjct: 328 SMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLG 387
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVL 313
GI P F+ L +A + GM + A+++
Sbjct: 388 DGIAPDIYTFNVLIKAYANCGMLDKAMII 416
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 96/215 (44%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L++ CK ++ +F +M ++ P Y I+++G + + + EM
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G + +Y I++ + +DEA+ LF+E+ A N K + T+I G+ +R+
Sbjct: 632 ESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVE 691
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + G P TY+ ++ + +A M M+ G P++R + V+
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 751
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
L+K A + ++ + + ++T +V
Sbjct: 752 RELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 92/221 (41%), Gaps = 14/221 (6%)
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L R + C+ P + L N S + R P + TY ++
Sbjct: 74 LARAPSSAACRSGPALAVALFNRAASRAQ-----------GPRVLSPTSHTYAILMDCCT 122
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ R A ++ + G+ N + +L +A RT+EA + + + G P V
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 182
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVL--PVMHMYSTLINSLCHEDKLDDACKYF 279
+Y I+++ C + A + M G + P + YST+I+ E ++ AC F
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLF 242
Query: 280 QEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
+EM+ GI P +S++ AL + M++ L Q ++K
Sbjct: 243 KEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNK 283
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 69/160 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +N ++ L K+R + A +F +++ +I + ++ G Q +
Sbjct: 630 MTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRR 689
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ + G P VV+Y IMI +EA ++F M+ C+P +
Sbjct: 690 VEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 749
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
++ L + + A + + +R F E T +V +
Sbjct: 750 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 158/299 (52%), Gaps = 4/299 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L+ +LCK ++ A++VFD M + +PD+ SY I+L G+ + L+ M +
Sbjct: 321 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 380
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M DG PD ++ ++I A+ + D+A+ +F EM KP + T+I L
Sbjct: 381 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A++ F Q +G P+ YN ++ +C + A ++ E+ G+ +
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+ ++++L K GR +A ++F ++ G P Y +++ +C +++ A+R++D
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFD-LTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 559
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + G+ P + +Y TL+N C ++D+ F+EML GI+P L+S + L G
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 618
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 153/305 (50%), Gaps = 3/305 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEGWGQQKN 60
+ G ++ ++ L+ +LC +A ++ M + P++ +Y +++G+ ++ +
Sbjct: 175 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 234
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++EM G PD+V+Y +++A C A+ D+A R+M P+ +
Sbjct: 235 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 294
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G S + EA++ F + ++ P+ T + ++G+ C +I +A + D M G
Sbjct: 295 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+I+L+ G + +F M G P T+ ++++ + +D A
Sbjct: 355 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLM-LGDGIAPDFYTFNVLIKAYANCGMLDKA 413
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M I++EM+ GV P + Y T+I +LC K+DDA + F +M+D G+ P ++ L Q
Sbjct: 414 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 473
Query: 301 LRDEG 305
G
Sbjct: 474 FCTHG 478
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 160/345 (46%), Gaps = 17/345 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L +N ++ LCK+R +++A+ +M +R P+ +Y L+ G+
Sbjct: 245 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 304
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V++EM+ PDVV+ +++ + C + EA ++F M P +
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NG ++ L + F G P+ T+N ++ AY ++ A + +EMR G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY V+ L + G+ ++A F +M + G P Y +++ FC + + A
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ-GVAPDKYAYNCLIQGFCTHGSLLKA 483
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--- 297
+ E+ G+ + +S++IN+LC ++ DA F +++G+ P ++S L
Sbjct: 484 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDG 543
Query: 298 -------KQALR------DEGMEETAVVLAQKIDKLRKTPLVDRG 329
++ALR G+E VV ++ K +D G
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 588
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 147/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ + +I LC+ ++ A E F++M + PD +Y L++G+ +
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 479
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+ E+ ++G D+V + +IN C R +A +F P ++
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 539
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ +AL+ F G EP Y +V YC RI++ + EM + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 599
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T Y I++ L +AGRT A F M+ + G + TY IV+R N D A
Sbjct: 600 IKPSTILYSIIIDGLFQAGRTVPAKVKFHEMT-ESGIAMDICTYNIVLRGLFKNRCFDEA 658
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ E++A V + +T+I+ + ++++A F + + P +S +
Sbjct: 659 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 718
Query: 301 LRDEGMEETA 310
L EG+ E A
Sbjct: 719 LIKEGLVEEA 728
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 130/278 (46%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ F+ +I+ LCK V AQ +FD PD Y++L++G+ +
Sbjct: 494 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 553
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G EP+VV Y ++N +C R DE + LFREM KPS ++ +I+G
Sbjct: 554 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 613
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R A F + + G + TYN V+ + ++A + E+R + N
Sbjct: 614 LFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 673
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T + ++ + + R EEA +F +SR P+V TY I++ V+ A ++
Sbjct: 674 IITLNTMIDGMFQTRRVEEAKDLFASISRSR-LVPSVVTYSIMITNLIKEGLVEEAEDMF 732
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
M+ G P + + ++ L ++++ A Y ++
Sbjct: 733 SSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 770
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 136/329 (41%), Gaps = 45/329 (13%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+R RAQ R P +Y IL++ + + ++ G +++
Sbjct: 95 NRAASRAQ------GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIII 148
Query: 83 YGIMINAHCSAKRYDEAV------------------------------------ELFREM 106
++ C AKR DEA+ +L R M
Sbjct: 149 ANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMM 208
Query: 107 E--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
C P+ + T+I+G E +++A F + +RG P+ TYN+VV A C +
Sbjct: 209 AEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKAR 268
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ A + +M + PN TY+ +++ G+ +EA VFK M R+ P V T
Sbjct: 269 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTL 327
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ C ++ A ++D M +G P + Y+ ++N + L D F ML
Sbjct: 328 SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 387
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVL 313
GI P F+ L +A + GM + A+++
Sbjct: 388 DGIAPDFYTFNVLIKAYANCGMLDKAMII 416
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ + + L++ CK ++ +F +M +R P Y+I+++G Q
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM + G D+ +Y I++ + +DEA+ LF+E+ A N K + T
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G+ +R+ EA F + P TY+ ++ + +A M M+ G
Sbjct: 680 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
PN+R + V+ L+K A + ++ + + ++T +V
Sbjct: 740 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 14/221 (6%)
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L R + C+ P + L N S + R P + TY ++
Sbjct: 74 LARAPSSAACRSGPALAVALFNRAASRAQ-----------GPRVLSPTSHTYAILMDCCT 122
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ R A ++ + G+ N + +L +A RT+EA + + + G P V
Sbjct: 123 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 182
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVL--PVMHMYSTLINSLCHEDKLDDACKYF 279
+Y I+++ C + A + M G + P + Y+T+I+ E ++ AC F
Sbjct: 183 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 242
Query: 280 QEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
+EM+ GI P ++++ AL + M++ L Q ++K
Sbjct: 243 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 283
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 72/160 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ +N ++ L K+R + A +F +++ +I + +++G Q +
Sbjct: 630 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 689
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ + P VV+Y IMI +EA ++F M+ C+P+ +
Sbjct: 690 VEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 749
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
++ L + + A + + +R F E T +V +
Sbjct: 750 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLF 789
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 158/299 (52%), Gaps = 4/299 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L+ +LCK ++ A++VFD M + +PD+ SY I+L G+ + L+ M +
Sbjct: 334 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 393
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M DG PD ++ ++I A+ + D+A+ +F EM KP + T+I L
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 453
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A++ F Q +G P+ YN ++ +C + A ++ E+ G+ +
Sbjct: 454 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 513
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+ ++++L K GR +A ++F ++ G P Y +++ +C +++ A+R++D
Sbjct: 514 FFSSIINNLCKLGRVMDAQNIFD-LTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDA 572
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + G+ P + +Y TL+N C ++D+ F+EML GI+P L+S + L G
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 631
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 153/305 (50%), Gaps = 3/305 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEGWGQQKN 60
+ G ++ ++ L+ +LC +A ++ M + P++ +Y +++G+ ++ +
Sbjct: 188 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 247
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++EM G PD+V+Y +++A C A+ D+A R+M P+ +
Sbjct: 248 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 307
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G S + EA++ F + ++ P+ T + ++G+ C +I +A + D M G
Sbjct: 308 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 367
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+I+L+ G + +F M G P T+ ++++ + +D A
Sbjct: 368 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLM-LGDGIAPDFYTFNVLIKAYANCGMLDKA 426
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M I++EM+ GV P + Y T+I +LC K+DDA + F +M+D G+ P ++ L Q
Sbjct: 427 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 486
Query: 301 LRDEG 305
G
Sbjct: 487 FCTHG 491
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 160/345 (46%), Gaps = 17/345 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L +N ++ LCK+R +++A+ +M +R P+ +Y L+ G+
Sbjct: 258 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 317
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V++EM+ PDVV+ +++ + C + EA ++F M P +
Sbjct: 318 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 377
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NG ++ L + F G P+ T+N ++ AY ++ A + +EMR G
Sbjct: 378 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 437
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY V+ L + G+ ++A F +M + G P Y +++ FC + + A
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ-GVAPDKYAYNCLIQGFCTHGSLLKA 496
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--- 297
+ E+ G+ + +S++IN+LC ++ DA F +++G+ P ++S L
Sbjct: 497 KELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDG 556
Query: 298 -------KQALR------DEGMEETAVVLAQKIDKLRKTPLVDRG 329
++ALR G+E VV ++ K +D G
Sbjct: 557 YCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 147/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ + +I LC+ ++ A E F++M + PD +Y L++G+ +
Sbjct: 433 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 492
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+ E+ ++G D+V + +IN C R +A +F P ++
Sbjct: 493 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 552
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ +AL+ F G EP Y +V YC RI++ + EM + G
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 612
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T Y I++ L +AGRT A F M+ + G + TY IV+R N D A
Sbjct: 613 IKPSTILYSIIIDGLFQAGRTVPAKMKFHEMT-ESGIAMDICTYNIVLRGLFKNRCFDEA 671
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ E++A V + +T+I+ + ++++A F + + P +S +
Sbjct: 672 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITN 731
Query: 301 LRDEGMEETA 310
L EG+ E A
Sbjct: 732 LIKEGLVEEA 741
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 129/278 (46%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ F+ +I+ LCK V AQ +FD PD Y++L++G+ +
Sbjct: 507 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKA 566
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G EP+VV Y ++N +C R DE + LFREM KPS ++ +I+G
Sbjct: 567 LRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 626
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R A F + + G + TYN V+ + ++A + E+R + N
Sbjct: 627 LFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 686
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T + ++ + + R EEA +F +SR P V TY I++ V+ A ++
Sbjct: 687 IITLNTMIDGMFQTRRVEEAKDLFASISRSR-LVPNVVTYSIMITNLIKEGLVEEAEDMF 745
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
M+ G P + + ++ L ++++ A Y ++
Sbjct: 746 SSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 783
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 136/329 (41%), Gaps = 45/329 (13%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+R RAQ R P +Y IL++ + + ++ G +++
Sbjct: 108 NRAASRAQ------GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIII 161
Query: 83 YGIMINAHCSAKRYDEAV------------------------------------ELFREM 106
++ C AKR DEA+ +L R M
Sbjct: 162 ANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMM 221
Query: 107 E--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
C P+ + T+I+G E +++A F + +RG P+ TYN+VV A C +
Sbjct: 222 AEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKAR 281
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ A + +M + PN TY+ +++ G+ +EA VFK M R+ P V T
Sbjct: 282 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTL 340
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ C ++ A ++D M +G P + Y+ ++N + L D F ML
Sbjct: 341 SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 400
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVL 313
GI P F+ L +A + GM + A+++
Sbjct: 401 DGIAPDFYTFNVLIKAYANCGMLDKAMII 429
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ + + L++ CK ++ +F +M +R P Y+I+++G Q
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM + G D+ +Y I++ + +DEA+ LF+E+ A N K + T
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 692
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G+ +R+ EA F + P TY+ ++ + +A M M+ G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
PN+R + V+ L+K A + ++ +
Sbjct: 753 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 786
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 14/221 (6%)
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L R + C+ P + L N S + R P + TY ++
Sbjct: 87 LARAPSSAACRSGPALAVALFNRAASRAQ-----------GPRVLSPTSHTYAILMDCCT 135
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ R A ++ + G+ N + +L +A RT+EA + + + G P V
Sbjct: 136 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 195
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVL--PVMHMYSTLINSLCHEDKLDDACKYF 279
+Y I+++ C + A + M G + P + Y+T+I+ E ++ AC F
Sbjct: 196 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 255
Query: 280 QEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
+EM+ GI P ++++ AL + M++ L Q ++K
Sbjct: 256 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 296
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 73/160 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ +N ++ L K+R + A +F +++ +I + +++G Q +
Sbjct: 643 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 702
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ + P+VV+Y IMI +EA ++F M+ C+P+ +
Sbjct: 703 VEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 762
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
++ L + + A + + +R F E T +V +
Sbjct: 763 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 802
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 164/322 (50%), Gaps = 4/322 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M K ++ + FN +++ LCK + RA +V + MK P++ +Y L++G+ G+
Sbjct: 146 MIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR 205
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + + +EM G P+ V+Y I+I+ C + A+ +F EM+ +P+
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LINGL S+ ++ EA+ Q EP T+N ++ +C + +N+A + ++M
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K G+ PN TY ++ K GR E+A++++ M + G P VSTY ++ C V
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDR-GIFPEVSTYNCLIAGLCRKGDV 384
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A + +EM ++ + + Y+ LI+SLC + + A K EM + G+ P ++ L
Sbjct: 385 KAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTL 444
Query: 298 KQALRDEGMEETAVVLAQKIDK 319
EG A+++ ++++
Sbjct: 445 MDGYCREGNLRAALIVRTRMER 466
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 163/343 (47%), Gaps = 39/343 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVER---AQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M +G+ + +N LID CK + + A + +M + P+ +Y IL++G+ +
Sbjct: 181 MKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK 240
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+N+ V+ EM+ G P+VV+Y I+IN CS + DEAV L +M +++ +P+
Sbjct: 241 DENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVT 300
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
LING K ++EA+ F +K+G +P A TY ++ AYC R+ DA+ + + M
Sbjct: 301 HNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMI 360
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI P TY+ ++ L + G + A S+ M K + V TY I++ C +
Sbjct: 361 DRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVV-TYNILIDSLCKKGES 419
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHED--------------------------- 270
A+++ DEM +G+ P Y+TL++ C E
Sbjct: 420 RKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVL 479
Query: 271 --------KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+L+DA EML+ G+ P + +K+ + ++G
Sbjct: 480 IKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 154/307 (50%), Gaps = 6/307 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D F + L D L+ ++ + R E F + F + S LL G ++
Sbjct: 79 DSFCVNSILADM--LVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESEN 136
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
M VYREM E +V+S+ I++N C + + A ++ +M+ P+ + TL
Sbjct: 137 GDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTL 196
Query: 122 ING---LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
I+G +G ++ +A + +G P TYN ++ +C ++ A R+ EM++
Sbjct: 197 IDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQR 256
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ PN TY+I+++ L G+ +EA ++ +M EP V T+ +++ FC N V+
Sbjct: 257 QGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSD-LEPNVVTHNVLINGFCKNKTVN 315
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A+ ++++M+ +GV P Y+TLI++ C + +++DA + M+D GI P ++ L
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375
Query: 299 QALRDEG 305
L +G
Sbjct: 376 AGLCRKG 382
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 153/278 (55%), Gaps = 7/278 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+++ +CKS + A ++ KM+ R+ P + +YTI+++ + L + EM+ G
Sbjct: 236 ILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKG 295
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+ +V +Y +I + CS R+D+ +L R+M P+ F LI+ L E +L+EA
Sbjct: 296 IKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAK 355
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + RG EP TYN+++ C R+++A +MMD M G P+ TY+I+++
Sbjct: 356 DLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGF 415
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
KA + ++ +F++MS + TV TY +++ FC + ++ +A +++ EM ++GV P
Sbjct: 416 CKAKQVDDGMRLFRKMSLRGMIADTV-TYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPG 474
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEM------LDIGI 287
+ Y+ L++ LC +L++A +M LDIGI
Sbjct: 475 IMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGI 512
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 160/348 (45%), Gaps = 35/348 (10%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + FN L++ LC V A E+ D M + PD+ + ++ G + +
Sbjct: 153 KLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVS 212
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ M +G +P+ +YG ++N C + A++L R+ME KP + +I
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L + RL +AL FF + + +G + TYN+++G++C R +D +++ +M I
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK---------------------------- 214
PN T+ ++ L+K G+ EA ++ M +
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392
Query: 215 ------PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
G +P + TY I++ FC QVD MR++ +M RG++ YSTLI C
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQ 315
KL A K FQEM+ G+ P ++ L L D G +EE +L Q
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQ 500
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + +N LI + C + ++ M R+ P++ +++ L++ ++
Sbjct: 291 METKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGK 350
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++Y EM G EP+ ++Y +I C+ KR DEA ++ M + C P +
Sbjct: 351 LTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNI 410
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING K++ + ++ F + RG + TY+ ++ +C S ++ A ++ EM G
Sbjct: 411 LINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQG 470
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY I+L L G EEA + +M K E + Y I++ C +VD A
Sbjct: 471 VHPGIMTYAILLDGLCDNGELEEALGILDQM-HKCKMELDIGIYNIIIHGMCNANKVDDA 529
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + ++GV + Y+ +++ LC L +A F++M + G P G ++ L +A
Sbjct: 530 WSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRA 589
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 138/270 (51%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID+L K + A++++++M R +P+ +Y L+ G K L N++ M
Sbjct: 338 FSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMV 397
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+ +Y I+IN C AK+ D+ + LFR+M + TLI G ++L
Sbjct: 398 SKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLI 457
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + +G P TY ++ C + + +A ++D+M KC + + Y+I++
Sbjct: 458 VAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIII 517
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H + A + ++A+S+F + K G + + +Y I++ C + + A ++ +MK G
Sbjct: 518 HGMCNANKVDDAWSLFCSLPSK-GVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGY 576
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P Y+TLI + + + + + +EM
Sbjct: 577 EPDGCTYNTLIRAHLRGNDITTSVQLIEEM 606
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 1/277 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A +F M + R P + + L + K + + ++M+ G D+ + IMIN
Sbjct: 74 AVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMIN 133
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C ++ A ++ +P+ F TL+NGL E R+ EA++ P
Sbjct: 134 CFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVP 193
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ T N +V C R+++A ++ M G PN TY +L+ + K+G T A +
Sbjct: 194 DLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLL 253
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
++M + +P V TY I++ C + ++D A+ + EM+ +G+ + Y++LI S C
Sbjct: 254 RKMEHRK-IKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS 312
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ DD + ++M+ I P FS L +L EG
Sbjct: 313 FGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEG 349
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 104/201 (51%), Gaps = 1/201 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ LI C+SR + A++VF +M + P I +Y ILL+G L
Sbjct: 435 GMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEA 494
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M E D+ Y I+I+ C+A + D+A LF + + K + +++G
Sbjct: 495 LGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSG 554
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L LSEA F + K+ G+EP+ TYN ++ A+ I + ++++EM++CG +
Sbjct: 555 LCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSD 614
Query: 185 TRTYDIVLHHLIKAGRTEEAY 205
T IV+ ++ +G ++++
Sbjct: 615 ASTVKIVM-DMLSSGELDKSF 634
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 36/265 (13%)
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
D+AV LF+ M + P+ F L L K+ L Q + +G + T N +
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIM 131
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG----------------- 199
+ +C ++ A+ M ++ K G PNT T++ +L+ L G
Sbjct: 132 INCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH 191
Query: 200 ------------------RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
R EA + RM G +P TY ++ C + A+
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMAN-GCQPNQFTYGPILNRMCKSGNTASAL 250
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ +M+ R + P + Y+ +I++LC + +LDDA +F EM GI+ +++L +
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310
Query: 302 RDEGMEETAVVLAQKIDKLRKTPLV 326
G + L + + + TP V
Sbjct: 311 CSFGRWDDGAQLLRDMITRKITPNV 335
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K ++ ++ +N +I +C + V+ A +F + + DI+SY I+L G ++ +
Sbjct: 501 MHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSS 560
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
L + ++R+MK+DG+EPD +Y +I AH +V+L EM+
Sbjct: 561 LSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMK 607
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 96/231 (41%), Gaps = 18/231 (7%)
Query: 113 PSPHIFCTL-INGLGSEKRLS----------------EALQFFGQSKKRGFEPEAPTYNA 155
P FC +GL S++++S +A+ F + P +N
Sbjct: 36 PYEFFFCVQGFSGLTSDRKMSSYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNR 95
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
+ G + + + + +M GI + T +I+++ + + A+S ++ K
Sbjct: 96 LFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIF-KL 154
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G EP T+ ++ C +V A+ + D M +P + +T++N LC +D++ +A
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
M+ G +P + + + G +A+ L +K++ + P V
Sbjct: 215 VDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHV 265
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 155/314 (49%), Gaps = 6/314 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++Q+L FN L+D LCKS+ VE A + + RF PD +Y IL G+ K
Sbjct: 165 MAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTS-RFRPDTVTYNILANGYCLIKR 223
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V +EM G EP +V+Y M+ + + + EA E + EM+ C+ + T
Sbjct: 224 TPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTT 283
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G G + +A + F + K G P TYNA++ C + +A + +EM + G
Sbjct: 284 VIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREG 343
Query: 181 IG-PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ PN TY++V+ L G E A +RM G V TY +V+R FC +V+
Sbjct: 344 VCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEH-GLRACVQTYNVVIRYFCDAGEVEK 402
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFSN 296
A+ ++ +M LP + Y+ LI+++ K +D A K +M+D G P F+
Sbjct: 403 ALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNR 462
Query: 297 LKQALRDEGMEETA 310
+ L G ++ A
Sbjct: 463 VLNGLVITGNQDFA 476
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 2/227 (0%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M+ P + I+ + S + AV F M + H F TL++ L KR
Sbjct: 130 MRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKR 189
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ A R F P+ TYN + YC R A R++ EM + GI P TY+
Sbjct: 190 VETAHSLLKTLTSR-FRPDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNT 248
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L ++ + +EA+ + M +K E V TY V+ F V A R++ EM
Sbjct: 249 MLKGYFRSNQIKEAWEFYLEM-KKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKE 307
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
GV+P + Y+ LI LC +D +++A F+EM G+ P + N+
Sbjct: 308 GVVPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNV 354
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 152/291 (52%), Gaps = 1/291 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ FN L+D LCK +++A+ V M K+ D +I +Y L++G+ K
Sbjct: 270 IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT 329
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
V+ M G PDV SY IMIN C K DEAV LF+EM + + P+ + +LI+GL
Sbjct: 330 FVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGL 389
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+S+A + RG + TY++++ A C + +++ A ++ +++ GI PN
Sbjct: 390 LKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNI 449
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY I++ L K GR ++A +V++ + K G V Y ++V C D A+ +
Sbjct: 450 YTYTILVDGLCKNGRLKDAQAVYQDLLIK-GYHLDVKMYNVMVNGLCKEGLFDEALSLVS 508
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+M+ G +P Y TL+ +L DK D A K +EM+ G + SN
Sbjct: 509 KMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSN 559
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 155/306 (50%), Gaps = 1/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID+LCK + V A ++ +M +R PD+ +YT L+ G L ++ +M
Sbjct: 207 YNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQML 266
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+PDV ++ I+++ C +A + M + + +L++G K+ +
Sbjct: 267 LKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQEN 326
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F +RG P+ +Y+ ++ C + +++A + EM + PNT TY+ ++
Sbjct: 327 KATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLI 386
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +A+ + M + G V TY ++ C N QVD A+ + ++K +G+
Sbjct: 387 DGLLKYGRISDAWDLVNEMHNR-GQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGI 445
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P ++ Y+ L++ LC +L DA +Q++L G ++++ + L EG+ + A+
Sbjct: 446 QPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALS 505
Query: 313 LAQKID 318
L K++
Sbjct: 506 LVSKME 511
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 152/315 (48%), Gaps = 4/315 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+K+ PD + LI ++ A +F++M + PD+ ++ IL++G ++ +
Sbjct: 232 VKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMK 291
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
V M G + ++V+Y +++ + K+ ++A +F M P + +I
Sbjct: 292 KARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMI 351
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL K + EA+ F + + P TYN+++ RI+DA+ +++EM G
Sbjct: 352 NGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQP 411
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+ TY +L L K + ++A ++ ++ + G +P + TY I+V C N ++ A
Sbjct: 412 ADVITYSSLLDALCKNHQVDKAITLITKI-KDQGIQPNIYTYTILVDGLCKNGRLKDAQA 470
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ ++ +G + MY+ ++N LC E D+A +M D G P + L +AL
Sbjct: 471 VYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALF 530
Query: 303 DEGMEETAVVLAQKI 317
+ + AV L +++
Sbjct: 531 ENDKNDKAVKLLREM 545
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 143/303 (47%), Gaps = 4/303 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
LKQ PD FN LI+ C H+ A V K+ K F PD + T L++G +
Sbjct: 92 LKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVR 151
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ ++ GF D VSYG +IN C A+++ R+++ +P+ ++ T+I
Sbjct: 152 EALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTII 211
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L +K + A + + P+ TY ++ R+ +A + ++M I
Sbjct: 212 DSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIK 271
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ T++I++ L K G ++A +V M ++ G + + TY ++ + Q + A
Sbjct: 272 PDVYTFNILVDGLCKEGEMKKARNVLAVMIKQ-GVDSNIVTYNSLMDGYFLVKQENKATF 330
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+++ M RGV P + YS +IN LC +D+A F+EM + P +++L L
Sbjct: 331 VFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLL 390
Query: 303 DEG 305
G
Sbjct: 391 KYG 393
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 107/211 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ ++ +I+ LCK++ V+ A +F +M + P+ +Y L++G +
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + G DV++Y +++A C + D+A+ L +++ +P+ + +
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL RL +A + +G+ + YN +V C ++A ++ +M G
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
P+ TY+ ++ L + + ++A + + M
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREM 545
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 2/241 (0%)
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
+ + ++++ + A+ ++ME +P F LIN L+ A
Sbjct: 64 IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ K GF P+ T ++ C + ++ +A D++ G + +Y +++ L K G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
T A V +++ +P V Y ++ C + V A + EM + + P + Y
Sbjct: 184 ETRAALQVLRKIDGLL-VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTY 242
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKID 318
+TLI +L +A F +ML I+P F+ L L EG M++ VLA I
Sbjct: 243 TTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIK 302
Query: 319 K 319
+
Sbjct: 303 Q 303
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 1/137 (0%)
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++ +L L+K A S K+M K +P + T+ I++ FC+ ++ A + ++
Sbjct: 67 FNKILSSLVKLNHFHTAISFSKQMELKQ-IQPDLFTFNILINCFCHLGHLNFAFSVLAKI 125
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
G P +TLI LC K+ +A + +++ G + L L G
Sbjct: 126 FKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGET 185
Query: 308 ETAVVLAQKIDKLRKTP 324
A+ + +KID L P
Sbjct: 186 RAALQVLRKIDGLLVQP 202
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 155/293 (52%), Gaps = 7/293 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G + + +++ +CKS + A ++F KM++R + Y+I+++ + N
Sbjct: 200 MVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGN 259
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM+ G + DVV+Y +I C+ R+D+ ++ REM N P+ F
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ E +L EA + + + RG P+ TY++++ +C R+ +A +M+D M G
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY I+++ KA R + +F +S K TV TY +V+ FC + ++++A
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTV-TYNTLVQGFCQSGKLNVA 438
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDIGI 287
++ EM +RGV P + Y L++ LC +L A + F++M L IGI
Sbjct: 439 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGI 491
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 150/300 (50%), Gaps = 1/300 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K ++ ++ +I LC + ++ +M R P++ +++ L++ + ++
Sbjct: 270 MEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGK 329
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+Y EM G PD ++Y +I+ C R EA ++ M + C+P+ +
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN KR+ ++ F + +G + TYN +V +C S ++N A + EM G
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G ++A +F++M +K + Y I++ C ++VD A
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKM-QKSRMILGIGIYNIIIHGMCNASKVDDA 508
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I LC + L +A F++M + G P ++ L +A
Sbjct: 509 WSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRA 568
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 152/308 (49%), Gaps = 1/308 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N LI+ LC V A + D+M K + + +Y +L + N +++R+M++
Sbjct: 178 NTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEE 237
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+ VV Y I+I++ C D+A+ LF EME K + ++I GL ++ R +
Sbjct: 238 RSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDD 297
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ + R P T++A++ + ++ +A + +EM GI P+T TY ++
Sbjct: 298 GAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLID 357
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
K R EA + M K G EP + TY I++ +C +VD MR++ E+ ++G++
Sbjct: 358 GFCKENRLGEANQMLDLMVSK-GCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLV 416
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
Y+TL+ C KL+ A + FQEM+ G+ P + L L D G + A+ +
Sbjct: 417 ADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEI 476
Query: 314 AQKIDKLR 321
+K+ K R
Sbjct: 477 FEKMQKSR 484
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 137/270 (50%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID K + A+E++++M R PD +Y+ L++G+ ++ L N++ M
Sbjct: 317 FSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMV 376
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP++V+Y I+IN++C AKR D + LF E+ + + TL+ G +L+
Sbjct: 377 SKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLN 436
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + RG P TY ++ C + + A + ++M+K + Y+I++
Sbjct: 437 VAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIII 496
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H + A + ++A+S+F +S K G +P V TY +++ C + A ++ +MK G
Sbjct: 497 HGMCNASKVDDAWSLFCSLSVK-GVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 555
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P Y+ LI + + + + +EM
Sbjct: 556 APSDCTYNILIRAHLGGSGVISSVELIEEM 585
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 1/280 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
V A ++F+ M + R P + ++ L ++K + +EM +G E ++ + I
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
MIN C ++ A + +P+ F TLING E R+SEA+ + +
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+ P T N ++ C R+ +A ++D M K G N TY VL+ + K+G T A
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F++M + + +V Y IV+ C + +D A+ +++EM+ +G+ + YS++I
Sbjct: 230 DLFRKMEERS-IKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC++ + DD K +EM+ I P FS L EG
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEG 328
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 1/289 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
L DF++L + + + + +M + ++ + I++ + +++ LL V
Sbjct: 68 SLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVV 127
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
GFEP+ +++ +IN C R EAV L M +P+ TLINGL +
Sbjct: 128 GRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLK 187
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
R++EAL + K G E TY V+ C S A + +M + I + Y
Sbjct: 188 GRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQY 247
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
IV+ L K G ++A S+F M K G + V Y ++ C + + D ++ EM
Sbjct: 248 SIVIDSLCKDGNLDDALSLFNEMEMK-GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R ++P + +S LI+ E KL +A + + EM+ GI P +S+L
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSL 355
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 1/201 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N L+ C+S + A+E+F +M R P + +Y ILL+G L
Sbjct: 414 GLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKA 473
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ +M+ + Y I+I+ C+A + D+A LF + KP + +I G
Sbjct: 474 LEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGG 533
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + LSEA F + K+ G P TYN ++ A+ + + +++EM+ G +
Sbjct: 534 LCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAAD 593
Query: 185 TRTYDIVLHHLIKAGRTEEAY 205
T +V+ L GR ++ +
Sbjct: 594 ASTIKMVVVML-SDGRLDKTF 613
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 158/299 (52%), Gaps = 4/299 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L+ +LCK ++ A++VFD M + +PD+ SY I+L G+ + L+ M +
Sbjct: 324 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 383
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M DG PD ++ ++I A+ + D+A+ +F EM KP + T+I L
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 443
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A++ F Q +G P+ YN ++ +C + A ++ E+ G+ +
Sbjct: 444 RIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 503
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+ ++++L K GR +A ++F ++ G P Y +++ +C +++ A+R++D
Sbjct: 504 FFSSIINNLCKLGRVMDAQNIFD-LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 562
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + G+ P + Y TL+N C ++D+ F+EML GI+P L+S + L + G
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG 621
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 153/305 (50%), Gaps = 3/305 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEGWGQQKN 60
+ G ++ ++ L+ +LC +A ++ M + P++ +Y +++G+ ++ +
Sbjct: 178 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGD 237
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++EM G PD+V+Y +++A C A+ D+A R+M P+ +
Sbjct: 238 VNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNN 297
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G S + EA++ F + ++ P+ T + ++G+ C +I +A + D M G
Sbjct: 298 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 357
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+I+L+ G + +F M G P T+ ++++ + +D A
Sbjct: 358 QNPDVFSYNIMLNGYATKGCLVDMTDLFDLM-LGDGIAPDFYTFNVLIKAYANCGMLDKA 416
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M I++EM+ GV P + Y T+I +LC K+DDA + F +M+D G+ P ++ L Q
Sbjct: 417 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 476
Query: 301 LRDEG 305
G
Sbjct: 477 FCTHG 481
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 147/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ + +I LC+ ++ A E F++M + PD +Y L++G+ +
Sbjct: 423 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 482
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+ E+ ++G D+V + +IN C R +A +F P ++
Sbjct: 483 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 542
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ +AL+ F G EP Y +V YC RI++ + EM + G
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG 602
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T Y I++ L +AGRT A F M+ + G + TY IV+R N D A
Sbjct: 603 IKPSTILYSIIIDGLFEAGRTVPAKMKFHEMT-ESGIAMDICTYNIVLRGLFKNRCFDEA 661
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ E++A V + +T+I+ + ++++A F + + P +S +
Sbjct: 662 IFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITN 721
Query: 301 LRDEGMEETA 310
L EG+ E A
Sbjct: 722 LIKEGLVEEA 731
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 142/293 (48%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L +N ++ LCK+R +++A+ +M +R P+ +Y L+ G+
Sbjct: 252 GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEA 311
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V++EM+ PDVV+ +++ + C + EA ++F M P + ++NG
Sbjct: 312 VRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNG 371
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ L + F G P+ T+N ++ AY ++ A + +EMR G+ P+
Sbjct: 372 YATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPD 431
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY V+ L + G+ ++A F +M + G P Y +++ FC + + A +
Sbjct: 432 VVTYRTVIAALCRIGKMDDAMEKFNQMIDQ-GVAPDKYAYNCLIQGFCTHGSLLKAKELI 490
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
E+ G+ + +S++IN+LC ++ DA F +++G+ P +++ L
Sbjct: 491 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 543
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ F+ +I+ LCK V AQ +FD PD Y +L++G+ +
Sbjct: 497 GMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 556
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G EP+VV YG ++N +C R DE + LFREM KPS ++ +I+G
Sbjct: 557 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDG 616
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R A F + + G + TYN V+ + ++A + E+R + N
Sbjct: 617 LFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKIN 676
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T + ++ + + R EEA +F +SR P+V TY I++ V+ A ++
Sbjct: 677 IITLNTMIDGMFQTRRVEEAKDLFASISRSR-LVPSVVTYSIMITNLIKEGLVEEAEDMF 735
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
M+ G P + + ++ L ++++ A Y ++
Sbjct: 736 SSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 773
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 136/329 (41%), Gaps = 45/329 (13%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+R RAQ R P +Y IL++ + + ++ G +++
Sbjct: 98 NRAASRAQ------GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIII 151
Query: 83 YGIMINAHCSAKRYDEAV------------------------------------ELFREM 106
++ C AKR DEA+ +L R M
Sbjct: 152 ANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMM 211
Query: 107 E--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
C P+ + T+I+G E +++A F + +RG P+ TYN+VV A C +
Sbjct: 212 AEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKAR 271
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ A + +M + PN TY+ +++ G+ +EA VFK M R+ P V T
Sbjct: 272 AMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTL 330
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ C ++ A ++D M +G P + Y+ ++N + L D F ML
Sbjct: 331 SMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLG 390
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVL 313
GI P F+ L +A + GM + A+++
Sbjct: 391 DGIAPDFYTFNVLIKAYANCGMLDKAMII 419
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ + + L++ CK ++ +F +M +R P Y+I+++G +
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM + G D+ +Y I++ + +DEA+ LF+E+ A N K + T
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G+ +R+ EA F + P TY+ ++ + +A M M+ G
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
PN+R + V+ L+K A + ++ +
Sbjct: 743 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 776
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 92/221 (41%), Gaps = 14/221 (6%)
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L R + C+ P + L N S + R P + TY ++
Sbjct: 77 LARAPSSAACRSGPALAVALFNRAASRAQ-----------GPRVLSPTSHTYAILMDCCT 125
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ R A ++ + G+ N + +L +A RT+EA + + + G P V
Sbjct: 126 RAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDV 185
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVL--PVMHMYSTLINSLCHEDKLDDACKYF 279
+Y I+++ C + A + M G + P + Y+T+I+ E ++ AC F
Sbjct: 186 FSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLF 245
Query: 280 QEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
+EM+ GI P ++++ AL + M++ L Q ++K
Sbjct: 246 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNK 286
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 72/160 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ +N ++ L K+R + A +F +++ +I + +++G Q +
Sbjct: 633 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 692
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ + P VV+Y IMI +EA ++F M+ C+P+ +
Sbjct: 693 VEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 752
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
++ L + + A + + +R F E T +V +
Sbjct: 753 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 792
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 154/291 (52%), Gaps = 3/291 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + FN L+ L + A +VFD+M+ R + PD++SYT L+ W +N
Sbjct: 281 MRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARN 339
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V+ EM ++G +PDVV + MI +R EAV++F M+A P+ +
Sbjct: 340 LVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTM 399
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++ A++ F + + G +P+ TY ++ Y + R++ +++EM + G
Sbjct: 400 LIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKG 459
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR-MFCYNAQVDM 239
P+ RTY+ ++ L ++A ++K+M +K G EPT+ TY ++++ F M
Sbjct: 460 CPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKK-GLEPTIHTYNMMMKSYFLGGRNYMM 518
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+W+EM +G+ P ++ Y+ IN + ++ACKY +EM+ G++ P
Sbjct: 519 GCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTP 569
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+Y ++ G+ + SM + +EM +G + ++ I I + +A AV +F M
Sbjct: 223 TYCKMVHILGKARQFQSMVALIQEMGKEG-ALCMDAFKIAIKSFAAAGEIKNAVGVFEMM 281
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
F L+ L E EA Q F + + R + P+ +Y A++ A+C + +
Sbjct: 282 RTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR-YAPDLRSYTALMLAWCNARNL 340
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A R+ +EM + G+ P+ ++ ++ L++ R EA +F+ M K G P V TY +
Sbjct: 341 VEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAK-GPAPNVWTYTM 399
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++R C ++DMAMR ++EM+ G P + Y+ L+ + ++D +EM G
Sbjct: 400 LIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKG 459
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
P G+ ++ L + L + M + A + +K+ K P +
Sbjct: 460 CPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTI 499
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 36/178 (20%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI CK ++ A F++M+ PD+ +YT LL G+G K + + + EM
Sbjct: 397 YTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMT 456
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF-------------- 118
G PD +Y +I + D+A ++++M +P+ H +
Sbjct: 457 QKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNY 516
Query: 119 ----------------------CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
ING R EA ++ + ++G + YN
Sbjct: 517 MMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYN 574
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 159/299 (53%), Gaps = 4/299 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD N L+ +LCK ++ A++VFD M + +PD+ SY I+L G+ + L+ M +
Sbjct: 325 LPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTD 384
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M DG PD+ ++ ++I A+ + D+A+ +F EM KP + T+I L
Sbjct: 385 LFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALC 444
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A++ F Q +G P+ Y+ ++ +C + A ++ E+ G+ +
Sbjct: 445 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIV 504
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+ ++++L K GR +A ++F ++ G P Y +++ +C +++ A+R++D
Sbjct: 505 FFSSIINNLCKLGRIMDAQNIFD-LTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDA 563
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + G+ P + +Y TL+N C ++D+ F+EML GI+P L++ + L G
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAG 622
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 151/305 (49%), Gaps = 3/305 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEGWGQQKN 60
+ G ++ ++ L+ +LC +A ++ M + PD+ +YT +++ + ++ +
Sbjct: 179 ELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGD 238
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++EM G PD+V+Y +++A C A+ +A R+M P +
Sbjct: 239 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNN 298
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G S + EA++ F + ++ P+ T N ++G+ C +I +A + D M G
Sbjct: 299 LIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKG 358
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y I+L+ G + +F M G P + T+ ++++ + +D A
Sbjct: 359 QNPDVFSYKIMLNGYATKGCLVDMTDLFDLM-LGDGIAPDIYTFSVLIKAYANCGMLDKA 417
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M I++EM+ GV P + Y+T+I +LC K+DDA + F +M+D G+ P + L Q
Sbjct: 418 MIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQG 477
Query: 301 LRDEG 305
G
Sbjct: 478 FCTHG 482
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 138/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ + +I LC+ ++ A E F++M + PD +Y L++G+ +
Sbjct: 424 MRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 483
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+ E+ ++G D+V + +IN C R +A +F P ++
Sbjct: 484 LLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSM 543
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ +AL+ F G EP Y +V YC RI++ + EM + G
Sbjct: 544 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 603
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T Y+I++ L AGRT A F M+ + G TY IV+R F N D A
Sbjct: 604 IKPSTILYNIIIDGLFVAGRTVPAKVKFHEMT-ESGIAINKCTYNIVLRGFFKNRCFDEA 662
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ ++ E++A V + +T+I + ++++A F + G+ P
Sbjct: 663 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 1/219 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ F+ +I+ LCK + AQ +FD PD Y++L++G+ +
Sbjct: 498 GMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKA 557
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G EP+VV YG ++N +C R DE + LFREM KPS ++ +I+G
Sbjct: 558 LRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 617
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R A F + + G TYN V+ + + ++A + E+R + +
Sbjct: 618 LFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKID 677
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
T + ++ + + R EEA +F +SR G P V T
Sbjct: 678 IITLNTMIAGMFQTRRVEEAKDLFASISRS-GLVPCVVT 715
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 133/329 (40%), Gaps = 45/329 (13%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+R RAQ R P +Y IL++ + + ++ G D++
Sbjct: 99 NRAASRAQ------GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIII 152
Query: 83 YGIMINAHCSAKRYDEAV------------------------------------ELFREM 106
++ C AKR DEA+ +L R M
Sbjct: 153 ANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMM 212
Query: 107 E--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
C P + T+I+ E +++A F + +RG P+ TY++VV A C +
Sbjct: 213 AEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 272
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+ A + +M G+ P+ TY+ +++ G+ +EA VFK M R+ P V T
Sbjct: 273 AMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRHSILPDVVTL 331
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ C ++ A ++D M +G P + Y ++N + L D F ML
Sbjct: 332 NMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLG 391
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVL 313
GI P FS L +A + GM + A+++
Sbjct: 392 DGIAPDIYTFSVLIKAYANCGMLDKAMII 420
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 126 GSEKRLSEALQFFGQSKKRG---FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GS L+ AL S+ +G P + TY ++ + R A ++ + G+
Sbjct: 88 GSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGL- 146
Query: 183 PNTRTYDIVLHHLIK----AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC---YNA 235
R I+ +HL+K A RT+EA + + + G P V +Y I+++ C +
Sbjct: 147 ---RVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSG 203
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
Q D +R+ E A P + Y+T+I+ E ++ AC F+EM+ GI P +S
Sbjct: 204 QADDLLRMMAEGGAV-CSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYS 262
Query: 296 NLKQAL-RDEGMEETAVVLAQKIDK 319
++ AL + M + L Q ++K
Sbjct: 263 SVVHALCKARAMGKAEAFLRQMVNK 287
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 149/285 (52%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + +N ++ LC+S ++A EVF +M PD++S+TIL+ G+ + +
Sbjct: 160 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 219
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y+EM+ G +PD+VS+ +I + D A+ REM P I+ +I G
Sbjct: 220 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 279
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+S+AL+ + G P+ TYN ++ C R+ DA +++EMR+ G+ P+
Sbjct: 280 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 339
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++H G+ ++A +F M + P + TY ++ C +D A +W
Sbjct: 340 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQR-LRPDIVTYNTLIDGMCRQGDLDKANDLW 398
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D+M +R + P YS LI+S C + +++DA + EM++ GI P
Sbjct: 399 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 443
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 155/326 (47%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ F LI C+ +E A +++ +M+ R PD+ S++ L+ + ++
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ REM+ G PD V Y ++I C A +A+ + EM C P + T
Sbjct: 251 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 310
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL E+RL +A + ++RG P+ T+ ++ YC +++ A ++ D M
Sbjct: 311 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 370
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ + + G ++A ++ M + P TY I++ C QV+ A
Sbjct: 371 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE-IFPNHVTYSILIDSHCEKGQVEDA 429
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
DEM +G+LP + Y+++I C + K+ Q+M+ + P ++ L
Sbjct: 430 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
E A L ++K + P V
Sbjct: 490 YIKEDKMHDAFKLLNMMEKEKVQPDV 515
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 153/310 (49%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + ++ N ++D ++ E A + D M + P I +Y +L+G +
Sbjct: 121 MEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM 180
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
EV++EM D G PDV S+ I+I C +EA+++++EM KP F
Sbjct: 181 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 240
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++ A+ + + + G P+ Y V+G +C + ++DA R+ DEM CG
Sbjct: 241 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 300
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ +L+ L K R +A + M R+ G P + T+ ++ +C ++D A
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEM-RERGVPPDLCTFTTLIHGYCIEGKLDKA 359
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M + + P + Y+TLI+ +C + LD A + +M I P +S L +
Sbjct: 360 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 419
Query: 301 LRDEGMEETA 310
++G E A
Sbjct: 420 HCEKGQVEDA 429
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 145/293 (49%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N ++ CK+ ++ V +M+KR PD+ ++ ++++ + + + + M
Sbjct: 98 LNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMV 157
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P +V+Y ++ C + +D+A E+F+EM+ P F LI G +
Sbjct: 158 SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIE 217
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL+ + + + RG +P+ +++ ++G + +++ A + EMR G+ P+ Y +V+
Sbjct: 218 EALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVI 277
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+AG +A V M G P V TY ++ C ++ A + +EM+ RGV
Sbjct: 278 GGFCRAGLMSDALRVRDEMV-GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + ++TLI+ C E KLD A + F ML+ +RP ++ L + +G
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 389
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 143/280 (51%), Gaps = 4/280 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N L++ LCK R + A+ + ++M++R PD+ ++T L+ G+ + L +
Sbjct: 302 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 361
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M + PD+V+Y +I+ C D+A +L+ +M + P+ + LI+
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ ++ +A F + +G P TYN+++ YC S ++ + + +M + P+
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++H IK + +A+ + M ++ +P V TY +++ F + V A I+++
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKEK-VQPDVVTYNMLINGFSVHGNVQEAGWIFEK 540
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
M A+G+ P + Y ++IN +A + EML G
Sbjct: 541 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 126/251 (50%), Gaps = 1/251 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L F LI C +++A ++FD M +R PDI +Y L++G +Q +
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N+++ +M P+ V+Y I+I++HC + ++A EM P+ + +
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G +S+ +F + P+ TYN ++ Y +++DA+++++ M K
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+++++ G +EA +F++M K G EP TY ++ A
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK-GIEPDRYTYMSMINGHVTAGNSKEA 569
Query: 241 MRIWDEMKARG 251
++ DEM RG
Sbjct: 570 FQLHDEMLQRG 580
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 3/285 (1%)
Query: 42 DPDIKSYT--ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
+ ++ +YT I++ + + ++ V EM+ PDVV++ +M++A A + A
Sbjct: 90 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 149
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ L M + KP + +++ GL +A + F + G P+ ++ ++G
Sbjct: 150 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 209
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+C I +A ++ EMR GI P+ ++ ++ + G+ + A + + M R G P
Sbjct: 210 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM-RCFGLVP 268
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
Y +V+ FC + A+R+ DEM G LP + Y+TL+N LC E +L DA
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM + G+ P F+ L EG + A+ L + R P
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 373
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 36/246 (14%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ YR + E + + IM++ +C A +D+ + EME
Sbjct: 81 DAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEME------------------ 122
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
KR P+ T+N +V A + A ++D M G+ P
Sbjct: 123 -----------------KRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGI 165
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ VL L ++G ++A+ VFK M G P V ++ I++ FC +++ A++I+
Sbjct: 166 VTYNSVLKGLCRSGMWDKAWEVFKEMD-DFGVAPDVRSFTILIGGFCRVGEIEEALKIYK 224
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
EM+ RG+ P + +S LI K+D A Y +EM G+ P G +++ + G
Sbjct: 225 EMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAG 284
Query: 306 MEETAV 311
+ A+
Sbjct: 285 LMSDAL 290
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 2 DKFGLKQE------LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
D FG E LP+ +N +I C+S +V + Q+ KM + PD+ +Y L+
Sbjct: 428 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 487
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
G+ ++ + ++ M+ + +PDVV+Y ++IN EA +F +M A +
Sbjct: 488 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 547
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
P + + ++ING + EA Q + +RG E
Sbjct: 548 PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 154/289 (53%), Gaps = 2/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI+ CK+R ++A + D+M+KR P Y +++G + S YR+M+
Sbjct: 36 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 95
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P V++Y I+++A C + R +A + +M C P+ + TLING +
Sbjct: 96 RHC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 154
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ F Q + P+ TYN ++ YC R D +++ EM K G PN TY+ ++
Sbjct: 155 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 214
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K+G+ +A+++ + M R+ +P+ T+ +++ MFC Q+D+A ++ M RG
Sbjct: 215 DSLVKSGKYIDAFNLAQMMLRRD-CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 273
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
LP ++ Y+ +I+ C +++DDA + + M + G P ++++ L
Sbjct: 274 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGL 322
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 156/295 (52%), Gaps = 1/295 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LI+ CK +++ A +F++M + PD+ +Y IL++G+ +Q+
Sbjct: 128 MIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQER 187
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +EM G EP+ ++Y ++++ + +Y +A L + M +CKPS F
Sbjct: 188 PQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNL 247
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ +L A + F RG P+ TYN ++ C + RI+DA ++++ M + G
Sbjct: 248 MIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAG 307
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ L KA + +EAY V++ + R G V T ++ C + ++D A
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVL-RNGGYFLDVVTCSTLIDGLCKSRRLDDA 366
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
++ EM+ G P + Y+ LI+ C D+LD + +F EMLD G P +S
Sbjct: 367 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYS 421
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 159/333 (47%), Gaps = 17/333 (5%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+D LCKS + A + + M + P++ +Y L+ G+ + N+ ++ +M
Sbjct: 105 YTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML 164
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++ PDV +Y I+I+ +C +R + +L +EM C+P+ + TL++ L +
Sbjct: 165 ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYI 224
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A +R +P T+N ++ +C +++ AY + M G P+ TY+I++
Sbjct: 225 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 284
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+A R ++A + +RM+ + G P V TY +V C +QVD A +++ ++ G
Sbjct: 285 SGACRANRIDDARQLLERMT-EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGY 343
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA------------ 300
+ STLI+ LC +LDDA K +EM G P ++ L
Sbjct: 344 FLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLA 403
Query: 301 ----LRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
+ D+G T + + IDKL K+ V G
Sbjct: 404 FFSEMLDKGCVPTVITYSIVIDKLCKSARVRDG 436
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 2/245 (0%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
LL + ++K ++++ PD ++Y +IN C A+ + +A L EME
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
P ++ T+I GL R+ AL + + +R P TY +V A C S RI+DA
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHY-RDMQRHCAPSVITYTILVDALCKSARISDAS 122
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++++M + G PN TY+ +++ K G +EA +F +M P V TY I++
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLEN-SCSPDVFTYNILIDG 181
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+C + ++ EM G P Y+TL++SL K DA Q ML +P
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241
Query: 291 GQLFS 295
F+
Sbjct: 242 HFTFN 246
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 8/233 (3%)
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+++A K+ EA +LF+ C P + TLING + +A + + +KRG
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 146 FEPEAPTYNAVVGAYCWSMRINDA---YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
P YN ++ C + R++ A YR D R C P+ TY I++ L K+ R
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYR--DMQRHC--APSVITYTILVDALCKSARIS 119
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
+A + + M + G P V TY ++ FC +D A+ ++++M P + Y+ L
Sbjct: 120 DASLILEDMI-EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
I+ C +++ D K QEM+ G P ++ L +L G A LAQ
Sbjct: 179 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQ 231
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 91/175 (52%), Gaps = 3/175 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N +I C++ ++ A+++ ++M + PD+ +Y ++ G + + E
Sbjct: 274 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 333
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
VY +++ G+ DVV+ +I+ C ++R D+A +L REME P + LI+G
Sbjct: 334 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 393
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+L ++L FF + +G P TY+ V+ C S R+ D ++ M + G+
Sbjct: 394 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 76/145 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ +N ++ LCK+ V+ A EV++ ++ + D+ + + L++G + +
Sbjct: 303 MTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRR 362
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ REM+ +G PDVV+Y I+I+ C A + D+++ F EM C P+ +
Sbjct: 363 LDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSI 422
Query: 121 LINGLGSEKRLSEALQFFGQSKKRG 145
+I+ L R+ + +RG
Sbjct: 423 VIDKLCKSARVRDGCMLLKTMLERG 447
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 165/340 (48%), Gaps = 37/340 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM- 71
+N++++ CK +VE A + K+ + DPD +YT L+ G+ Q+K+L S +V+ EM
Sbjct: 221 YNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMP 280
Query: 72 ----------------------------------KDDGFEPDVVSYGIMINAHCSAKRYD 97
KDD P V +Y ++I + C ++R
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKS 340
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
EA+ L +EME T KP+ H + LI+ L S+ + +A + GQ ++G P TYNA++
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC I DA +++ M + PNTRTY+ ++ K+ +A V +M +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERK-V 458
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P V TY ++ C + D A R+ M RG++P Y+++I+SLC ++++AC
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
F + G+ P +++ L G + A ++ +K+
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI CKS +V +A V +KM +R+ PD+ +Y L++G + N S + M
Sbjct: 431 YNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PD +Y MI++ C +KR +EA +LF +E P+ ++ LI+G ++
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + P + T+NA++ C ++ +A + ++M K G+ P T I++
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L+K G + AYS F++M GT+P TY ++ +C ++ A + +M+ GV
Sbjct: 610 HRLLKDGDFDHAYSRFQQM-LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + YS+LI + + A + M D G P F +L + L
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 160/344 (46%), Gaps = 35/344 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ-- 58
M++ G+K + + LID+LC E+A+E+ +M ++ P++ +Y L+ G+ ++
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 59 -----------------KNLLSMNE---------------VYREMKDDGFEPDVVSYGIM 86
N + NE V +M + PDVV+Y +
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
I+ C + +D A L M P + ++I+ L KR+ EA F +++G
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P Y A++ YC + ++++A+ M+++M PN+ T++ ++H L G+ +EA
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ ++M K G +PTVST I++ + D A + +M + G P H Y+T I +
Sbjct: 589 LEEKMV-KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
C E +L DA +M + G+ P +S+L + D G A
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFA 691
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 152/298 (51%), Gaps = 4/298 (1%)
Query: 2 DKFGLKQEL--PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
++F LK +L +N L+++L + V+ ++V+ +M + + P+I +Y ++ G+ +
Sbjct: 173 ERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLG 232
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
N+ N+ ++ + G +PD +Y +I +C K D A ++F EM C+ + +
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYT 292
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI+GL +R+ EA+ F + K P TY ++ + C S R ++A ++ EM +
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GI PN TY +++ L + E+A + +M K G P V TY ++ +C ++
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK-GLMPNVITYNALINGYCKRGMIED 411
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A+ + + M++R + P Y+ LI C + + A +ML+ + P +++L
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSL 468
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 160/370 (43%), Gaps = 53/370 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ-- 58
M+ GL + + +ID+LCKS+ VE A ++FD ++++ +P++ YT L++G+ +
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 59 -----------------KNLLSMNEVYREMKDDG----------------FEPDVVSYGI 85
N L+ N + + DG +P V + I
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ +D A F++M ++ KP H + T I E RL +A + ++ G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI--KAGRTEE 203
P+ TY++++ Y + N A+ ++ MR G P+ T+ ++ HL+ K G+ +
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 204 AYSVFKRMSR---------------KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM- 247
+ MS + P +YE ++ C + +A +++D M
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+ G+ P +++ L++ C K ++A K +M+ +G P + L L +G +
Sbjct: 788 RNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEK 847
Query: 308 ETAVVLAQKI 317
E + Q +
Sbjct: 848 ERGTSVFQNL 857
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 128/286 (44%), Gaps = 17/286 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL+ + LI L K + A F +M PD +YT ++ + ++
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL ++ +M+++G PD+ +Y +I + + + A ++ + M T C+PS H F +
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLS 712
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L K +G K++G EPE + A M + ++++M +
Sbjct: 713 LIKHLLEMK--------YG--KQKGSEPE-------LCAMSNMMEFDTVVELLEKMVEHS 755
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN ++Y+ ++ + + G A VF M R G P+ + ++ C + + A
Sbjct: 756 VTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEA 815
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ D+M G LP + LI L + + + FQ +L G
Sbjct: 816 AKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ CK + A +V D M P ++S +L+ G ++ V++ +
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
G+ D +++ I+I+ + ELF ME CK S + LI G
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 155/312 (49%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+ C++ V+RA+ + D M++ P++ ++ ++ G + + +V+ EM
Sbjct: 195 YNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV 254
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G PD VSY ++ +C EA+ +F EM P F +LI+ + L
Sbjct: 255 KEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLE 314
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+ + ++RG + T+ A++ +C ++DA + EMR+C I P+ Y+ ++
Sbjct: 315 RAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALI 374
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ GR +EA + + M K G +P V TY ++ +C N A ++ +M GV
Sbjct: 375 NGYCMVGRMDEARELVREMEAK-GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
LP YS+LI LC E +L DA F+ M+ +G++P +++L EG E A+
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALS 493
Query: 313 LAQKIDKLRKTP 324
L ++ K P
Sbjct: 494 LHDEMVKAGVLP 505
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 148/301 (49%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK L FN +++ +CK+ +E A++VFD+M K PD SY L+ G+ +
Sbjct: 218 MREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGC 277
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V+ EM G PDVV++ +I+ C A + AV L REM + + F
Sbjct: 278 SHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTA 337
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + L +AL + ++ +P YNA++ YC R+++A ++ EM G
Sbjct: 338 LIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +L K G T A+ + ++M G P TY ++R+ C ++ A
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN-GVLPDAITYSSLIRVLCEEKRLGDA 456
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ M + G+ P Y++LI+ C E ++ A EM+ G+ P +S L
Sbjct: 457 HVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLING 516
Query: 301 L 301
L
Sbjct: 517 L 517
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 144/292 (49%), Gaps = 7/292 (2%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTIL---LEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
A+ FD M P++ +Y IL L G G +K LS V R+M+ G +P+ V+Y
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS---VLRDMRGAGCDPNAVTYNT 197
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++ A C A D A L M KP+ F +++NG+ R+ +A + F + K G
Sbjct: 198 LVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG 257
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ +YN +VG YC ++A + EM + GI P+ T+ ++H + KAG E A
Sbjct: 258 LAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAV 317
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ + M R+ G + T+ ++ FC +D A+ EM+ + P + Y+ LIN
Sbjct: 318 GLVREM-RERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALING 376
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
C ++D+A + +EM G++P +S + A G +A L Q++
Sbjct: 377 YCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQM 428
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 153/333 (45%), Gaps = 18/333 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ F LID CK ++ A +M++ R P + Y L+ G+
Sbjct: 323 MRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGR 382
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ REM+ G +PDVV+Y +++A+C A +L ++M P + +
Sbjct: 383 MDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSS 442
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L EKRL +A F G +P+ TY +++ +C + A + DEM K G
Sbjct: 443 LIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAG 502
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYS-VFKRMSRKPGTEPTVSTYEIVVRM--------- 230
+ P+ TY ++++ L K+ RT+EA +FK +P P Y+ ++R
Sbjct: 503 VLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEP--VPANIKYDALMRCCRNAELKSV 560
Query: 231 ------FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
FC ++ A +++ + R +YS LI+ C E + A + ++ML
Sbjct: 561 LALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQ 620
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
G P +L + L ++GM A + Q++
Sbjct: 621 CGFAPNSTSTISLIRGLFEKGMVVEADQVIQQL 653
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 146/320 (45%), Gaps = 16/320 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ F LI +CK+ ++ERA + +M++R + ++T L++G+ ++
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L REM+ +P VV Y +IN +C R DEA EL REMEA KP + T
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ A Q Q + G P+A TY++++ C R+ DA+ + M G
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ K G E A S+ M K G P V TY +++ +A+ A
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMV-KAGVLPDVVTYSVLINGLSKSARTKEA 526
Query: 241 MRIWDEMKARGVLPVMHMYS---------------TLINSLCHEDKLDDACKYFQEMLDI 285
R+ ++ +P Y L+ C + +++A K +Q +LD
Sbjct: 527 QRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDR 586
Query: 286 GIRPPGQLFSNLKQALRDEG 305
G ++S L EG
Sbjct: 587 NWNLDGSVYSVLIHGHCREG 606
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 122/249 (48%), Gaps = 2/249 (0%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAV 100
+ P + +Y +L +L S + M DG P+V +Y I++ A C EA+
Sbjct: 119 YAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177
Query: 101 ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
+ R+M C P+ + TL+ + A + ++ G +P T+N+VV
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C + R+ DA ++ DEM K G+ P+ +Y+ ++ K G + EA SVF M+RK G P
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRK-GIMPD 296
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V T+ ++ + C ++ A+ + EM+ RG+ ++ LI+ C + LDDA +
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356
Query: 281 EMLDIGIRP 289
EM I+P
Sbjct: 357 EMRQCRIQP 365
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 97/228 (42%), Gaps = 15/228 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ--- 57
M GL+ + + LID CK +VERA + D+M K PD+ +Y++L+ G +
Sbjct: 463 MISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSAR 522
Query: 58 ----QKNLLSM---NEVYREMKDDGF-----EPDVVSYGIMINAHCSAKRYDEAVELFRE 105
Q+ L + V +K D ++ S ++ C +EA ++++
Sbjct: 523 TKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQS 582
Query: 106 MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
+ N ++ LI+G E + +AL F Q + GF P + + +++
Sbjct: 583 ILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGM 642
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
+ +A +++ ++ C + ++ +K G + V M+R
Sbjct: 643 VVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMAR 690
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P+V Y V+ + +A + A R +D M + GV P ++ Y+ L+ +LC +A
Sbjct: 118 GYAPSVLAYNAVL-LALSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++M G P ++ L A G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAG 206
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 154/281 (54%), Gaps = 2/281 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LCK +E A ++ + + PD+ ++ L++G KN E++ EMK
Sbjct: 336 YNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMK 395
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G +PD +Y I+I++ C +R EA+ L +EME++ C + ++ TLI+GL +R+
Sbjct: 396 NKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIE 455
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + F Q + G + TYN ++ C + R+ +A ++MD+M G+ P+ TY+ +L
Sbjct: 456 DAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLL 515
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + G E+A + + M+ G EP + TY ++ C +VD+A ++ ++ +G+
Sbjct: 516 TYFCRVGDIEKAGDIVQTMASN-GCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGI 574
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+ H Y+ +I +L + + + F+EM++ PP L
Sbjct: 575 VLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKS-DPPDAL 614
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N LI +CK E+A E+ +M R P+ +Y L+ ++ + +
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAA 352
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ R + G PDV ++ +I C +K D A+E+F EM+ CKP + LI+
Sbjct: 353 TDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDS 412
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E+RL EAL + + G A YN ++ C S RI DA + D+M G+ +
Sbjct: 413 LCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRS 472
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY+ ++ L K R EEA + +M + G +P TY ++ FC ++ A I
Sbjct: 473 SVTYNTLIDGLCKNKRVEEASQLMDQMIME-GLKPDKFTYNSLLTYFCRVGDIEKAGDIV 531
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M + G P + Y TLI LC ++D A K + + GI ++ + QAL
Sbjct: 532 QTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQAL 588
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 134/274 (48%), Gaps = 1/274 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ CK VE A ++ + F PD ++ L+ G+ + N+ ++ M + G
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F+PDV +Y +I+ C +++A+E+ ++M C P+ + TLI+ L E + A
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+G P+ T+N ++ C S + A M +EM+ G P+ TY I++ L
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
R +EA + K M G Y ++ C + +++ A I+D+M+ GV
Sbjct: 414 CYERRLKEALMLLKEM-ESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRS 472
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
Y+TLI+ LC ++++A + +M+ G++P
Sbjct: 473 SVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP 506
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 158/338 (46%), Gaps = 17/338 (5%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
++ G K + +N ++ L + ++ + + KM D+ ++ +L++ + L
Sbjct: 115 NELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQL 174
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ EM + G +PD +++ ++ + A+++ ++M C + L
Sbjct: 175 RPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVL 234
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+NG E R+ EAL+F + + GF P+ T+N++V +C +NDA ++D M + G
Sbjct: 235 VNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGF 294
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY+ ++ + K G E+A + ++M + + P TY ++ C +++ A
Sbjct: 295 DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECS-PNTVTYNTLISALCKENEIEAAT 353
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS------ 295
+ + ++G+LP + ++TLI LC D A + F+EM + G +P +S
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413
Query: 296 ----NLKQAL------RDEGMEETAVVLAQKIDKLRKT 323
LK+AL G AVV ID L K+
Sbjct: 414 CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKS 451
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 37/318 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K + ++ LID+LC R ++ A +
Sbjct: 394 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLL--------------------------- 426
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+EM+ G + V Y +I+ C ++R ++A E+F +ME S + T
Sbjct: 427 --------KEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNT 478
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL KR+ EA Q Q G +P+ TYN+++ +C I A ++ M G
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY ++ L +AGR + A + + + K G T Y V++ +
Sbjct: 539 CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMK-GIVLTPHAYNPVIQALFMRKRTKEG 597
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCH-EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
MR++ EM + P + + LC+ + +A + EML+ GI P F L +
Sbjct: 598 MRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAE 657
Query: 300 ALRDEGMEETAVVLAQKI 317
L ME+T + L +
Sbjct: 658 GLCSLSMEDTLIELINMV 675
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
P ++ S + ++ +++ G PN T+ ++ E ++ K
Sbjct: 56 PPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIE---NLLKI 112
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
+ + G +P + Y I + + ++ + + +M G++ + ++ LI +LC
Sbjct: 113 LENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAH 172
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+L A +EM + G++P F+ L Q +EG
Sbjct: 173 QLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEG 207
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 157/324 (48%), Gaps = 8/324 (2%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ FG+ + N L+ LCK +E A +V D++ P++ +YT +L G+ + ++
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
S V EM D G+ PD +Y ++++ +C R+ EA + +ME +P+ + +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I L EK+ EA F + +R F P++ V+ A C ++++A + +M K
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ ++H L K GR EA +F + G+ P++ TY ++ C ++ A
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEFEK--GSIPSLLTYNTLIAGMCEKGELTEAG 420
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R+WD+M R P Y+ LI L + + + +EML+IG P F L + L
Sbjct: 421 RLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Query: 302 RDEGMEETAV------VLAQKIDK 319
+ G EE A+ V+ K+DK
Sbjct: 481 QKLGKEEDAMKIVSMAVMNGKVDK 504
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 8/311 (2%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
RL+ + + ++++ A ++F K F + +Y +L + + + + +++
Sbjct: 51 RLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLR 110
Query: 73 DDGFEPDVVSYGIMINA---HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+ + P + I+ + A RY+ ++ +F + K S TL+N L +
Sbjct: 111 N-SYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQ 169
Query: 130 RLSEALQFFGQSKKR-GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
R F SK+ G P T N +V A C I AY+++DE+ G+ PN TY
Sbjct: 170 RFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTY 229
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+L + G E A V + M + G P +TY +++ +C + A + D+M+
Sbjct: 230 TTILGGYVARGDMESAKRVLEEMLDR-GWYPDATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+ P Y +I +LC E K +A F EML+ P L + AL ++ +
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVD 348
Query: 309 TAVVLAQKIDK 319
A L +K+ K
Sbjct: 349 EACGLWRKMLK 359
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 149/285 (52%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + +N ++ LC+S ++A EVF +M PD++S+TIL+ G+ + +
Sbjct: 221 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 280
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y+EM+ G +PD+VS+ +I + D A+ REM P I+ +I G
Sbjct: 281 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 340
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+S+AL+ + G P+ TYN ++ C R+ DA +++EMR+ G+ P+
Sbjct: 341 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 400
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++H G+ ++A +F M + P + TY ++ C +D A +W
Sbjct: 401 LCTFTTLIHGYCIEGKLDKALQLFDTMLNQR-LRPDIVTYNTLIDGMCRQGDLDKANDLW 459
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D+M +R + P YS LI+S C + +++DA + EM++ GI P
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILP 504
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 155/326 (47%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ F LI C+ +E A +++ +M+ R PD+ S++ L+ + ++
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ REM+ G PD V Y ++I C A +A+ + EM C P + T
Sbjct: 312 MDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNT 371
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL E+RL +A + ++RG P+ T+ ++ YC +++ A ++ D M
Sbjct: 372 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 431
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ + + G ++A ++ M + P TY I++ C QV+ A
Sbjct: 432 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE-IFPNHVTYSILIDSHCEKGQVEDA 490
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
DEM +G+LP + Y+++I C + K+ Q+M+ + P ++ L
Sbjct: 491 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
E A L ++K + P V
Sbjct: 551 YIKEDKMHDAFKLLNMMEKEKVQPDV 576
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 153/310 (49%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + ++ N ++D ++ E A + D M + P I +Y +L+G +
Sbjct: 182 MEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGM 241
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
EV++EM D G PDV S+ I+I C +EA+++++EM KP F
Sbjct: 242 WDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSC 301
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++ A+ + + + G P+ Y V+G +C + ++DA R+ DEM CG
Sbjct: 302 LIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 361
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ +L+ L K R +A + M R+ G P + T+ ++ +C ++D A
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEM-RERGVPPDLCTFTTLIHGYCIEGKLDKA 420
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D M + + P + Y+TLI+ +C + LD A + +M I P +S L +
Sbjct: 421 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 480
Query: 301 LRDEGMEETA 310
++G E A
Sbjct: 481 HCEKGQVEDA 490
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 143/283 (50%), Gaps = 4/283 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N L++ LCK R + A+ + ++M++R PD+ ++T L+ G+ + L +
Sbjct: 363 LPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQ 422
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M + PD+V+Y +I+ C D+A +L+ +M + P+ + LI+
Sbjct: 423 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 482
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ ++ +A F + +G P TYN+++ YC S ++ + + +M + P+
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 542
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++H IK + +A+ + M K +P V TY +++ F + V A I+++
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMME-KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 601
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M A+G+ P + Y ++IN +A + EML G P
Sbjct: 602 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 644
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 145/293 (49%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N ++ CK+ ++ V +M+KR PD+ ++ ++++ + + + + M
Sbjct: 159 LNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMV 218
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P +V+Y ++ C + +D+A E+F+EM+ P F LI G +
Sbjct: 219 SKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIE 278
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL+ + + + RG +P+ +++ ++G + +++ A + EMR G+ P+ Y +V+
Sbjct: 279 EALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVI 338
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+AG +A V M G P V TY ++ C ++ A + +EM+ RGV
Sbjct: 339 GGFCRAGLMSDALRVRDEMV-GCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + ++TLI+ C E KLD A + F ML+ +RP ++ L + +G
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQG 450
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 127/254 (50%), Gaps = 1/254 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L F LI C +++A ++FD M +R PDI +Y L++G +Q +
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N+++ +M P+ V+Y I+I++HC + ++A EM P+ + +
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G +S+ +F + P+ TYN ++ Y +++DA+++++ M K
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+++++ G +EA +F++M K G EP TY ++ A
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK-GIEPDRYTYMSMINGHVTAGNSKEA 630
Query: 241 MRIWDEMKARGVLP 254
++ DEM RG P
Sbjct: 631 FQLHDEMLQRGFAP 644
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 3/285 (1%)
Query: 42 DPDIKSYT--ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
+ ++ +YT I++ + + ++ V EM+ PDVV++ +M++A A + A
Sbjct: 151 NSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAA 210
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ L M + KP + +++ GL +A + F + G P+ ++ ++G
Sbjct: 211 MALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGG 270
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+C I +A ++ EMR GI P+ ++ ++ + G+ + A + + M R G P
Sbjct: 271 FCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM-RCFGLVP 329
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
Y +V+ FC + A+R+ DEM G LP + Y+TL+N LC E +L DA
Sbjct: 330 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 389
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM + G+ P F+ L EG + A+ L + R P
Sbjct: 390 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 434
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 36/246 (14%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ YR + E + + IM++ +C A +D+ + EME
Sbjct: 142 DAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEME------------------ 183
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
KR P+ T+N +V A + A ++D M G+ P
Sbjct: 184 -----------------KRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGI 226
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ VL L ++G ++A+ VFK M G P V ++ I++ FC +++ A++I+
Sbjct: 227 VTYNSVLKGLCRSGMWDKAWEVFKEMD-DFGVAPDVRSFTILIGGFCRVGEIEEALKIYK 285
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
EM+ RG+ P + +S LI K+D A Y +EM G+ P G +++ + G
Sbjct: 286 EMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAG 345
Query: 306 MEETAV 311
+ A+
Sbjct: 346 LMSDAL 351
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID+ C+ VE A D+M + P+I +Y +++G+ + N+ + ++M
Sbjct: 474 YSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 533
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ PD+++Y +I+ + + +A +L ME +P + LING +
Sbjct: 534 VNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQ 593
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
EA F + +G EP+ TY +++ + + +A+++ DEM + G P+ +
Sbjct: 594 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 647
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 DKFGLKQE------LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
D FG E LP+ +N +I C+S +V + Q+ KM + PD+ +Y L+
Sbjct: 489 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 548
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
G+ ++ + ++ M+ + +PDVV+Y ++IN EA +F +M A +
Sbjct: 549 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 608
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
P + + ++ING + EA Q + +RGF P+
Sbjct: 609 PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K ++ ++ +N LI+ +V+ A +F+KM + +PD +Y ++ G N
Sbjct: 567 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 626
Query: 61 LLSMNEVYREMKDDGFEPD 79
+++ EM GF PD
Sbjct: 627 SKEAFQLHDEMLQRGFAPD 645
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 164/324 (50%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++ + ++ +N ++ +LC S ++ A EV D+ +R PD+ +YTIL+E
Sbjct: 199 LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSG 258
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ G +PDVV+Y ++IN C R DEA++ M + CKP+
Sbjct: 259 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNI 318
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + S R +A + ++G P T+N ++ C + A ++++M K G
Sbjct: 319 ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ +Y+ +LH + + + A + M + G P + TY ++ C + +VD A
Sbjct: 379 CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR-GCYPDIVTYNTLLTALCKDGKVDAA 437
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I +++ ++G PV+ Y+T+I+ L K + A + +EM G++P +S L +
Sbjct: 438 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRG 497
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG + A+ + ++ L P
Sbjct: 498 LGREGKVDEAIKIFHDMEGLSIKP 521
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 161/318 (50%), Gaps = 6/318 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++ G ++ +N LI CKS +++A EV ++M PD+ +Y +L
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGK 223
Query: 61 LLSMNEVY-REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L EV R+++ + + PDV++Y I+I A C+ +A++L EM CKP +
Sbjct: 224 LKEAMEVLDRQLQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 282
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LING+ E RL EA++F G +P T+N ++ + C + R DA R++ +M +
Sbjct: 283 VLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK 342
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ T++I+++ L + A V ++M K G P +Y ++ FC ++D
Sbjct: 343 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMP-KHGCVPNSLSYNPLLHGFCQEKKMDR 401
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ + M +RG P + Y+TL+ +LC + K+D A + ++ G P ++ +
Sbjct: 402 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVID 461
Query: 300 ALRDEGMEETAVVLAQKI 317
L G E AV L +++
Sbjct: 462 GLTKVGKTEYAVELLEEM 479
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 160/329 (48%), Gaps = 7/329 (2%)
Query: 1 MDKFGLKQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+++ + ++PD LI C+S ++A + + ++ PD+ +Y +L+ G+ +
Sbjct: 129 LERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCK 188
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ EV M PDVV+Y ++ + C + + EA+E+ C P
Sbjct: 189 SGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVIT 245
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI ++ + +A++ + +K+G +P+ TYN ++ C R+++A + ++ M
Sbjct: 246 YTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 305
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G PN T++I+L + GR +A + M RK G P+V T+ I++ C +
Sbjct: 306 SYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK-GCSPSVVTFNILINFLCRKRLL 364
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A+ + ++M G +P Y+ L++ C E K+D A +Y + M+ G P ++ L
Sbjct: 365 GRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTL 424
Query: 298 KQALRDEGMEETAVVLAQKIDKLRKTPLV 326
AL +G + AV + ++ +P++
Sbjct: 425 LTALCKDGKVDAAVEILNQLSSKGCSPVL 453
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 148/303 (48%), Gaps = 1/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K ++ +N LI+ +CK ++ A + + M P++ ++ I+L
Sbjct: 269 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGR 328
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M G P VV++ I+IN C + A+++ +M C P+ +
Sbjct: 329 WMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNP 388
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G EK++ A+++ RG P+ TYN ++ A C +++ A +++++ G
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY+ V+ L K G+TE A + + M RK G +P + TY ++R +VD A
Sbjct: 449 CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRK-GLKPDIITYSTLLRGLGREGKVDEA 507
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++I+ +M+ + P Y+ ++ LC + A + M++ G +P ++ L +
Sbjct: 508 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Query: 301 LRD 303
+ D
Sbjct: 568 IAD 570
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L E L+F + +G P+ +++ +C S + A R+M+ + G P+ TY++
Sbjct: 122 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNV 181
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTE-------------------------------P 219
++ K+G ++A V +RMS P P
Sbjct: 182 LIGGYCKSGEIDKALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYP 241
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY I++ C ++ V AM++ DEM+ +G P + Y+ LIN +C E +LD+A K+
Sbjct: 242 DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFL 301
Query: 280 QEMLDIGIRP 289
M G +P
Sbjct: 302 NNMPSYGCKP 311
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 157/303 (51%), Gaps = 1/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +L N +D + K+ VE+ + +F+ MK F PD++SY+IL+ G +
Sbjct: 516 MIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQ 575
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ M GF D +Y +++ C + + D+A E+ EM+ + P+ + +
Sbjct: 576 ARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGS 635
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL RL EA F ++K +G E Y++++ + RI++AY +++EM K G
Sbjct: 636 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG 695
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T++ ++ L+K +EA F+ M ++ P TY I++ C + + A
Sbjct: 696 LTPNVYTWNSLMDALVKTEEIDEALICFQSM-KEMKCSPNTYTYSILINGLCRVQKYNKA 754
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
W EM+ +G++P + Y+T+I+ L + DA F+ G P F+ L +
Sbjct: 755 FVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEG 814
Query: 301 LRD 303
+ +
Sbjct: 815 MSN 817
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 148/286 (51%), Gaps = 2/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + +P F L+ L + +E A + D++K +PDI Y + ++ +G+ +
Sbjct: 202 MQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGS 261
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + E+K G PD VSY M+ C A R EA ELF +MEA P + + T
Sbjct: 262 VDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNT 321
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G GS +R +A + + ++RG P ++N+++ ++++A + D M+K
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK-D 380
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+I++ L AGR EAY + M G P + + I+V C Q++ A
Sbjct: 381 AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELA-GLFPNLLSVNIMVDRLCKANQLEEA 439
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
RI++ RG P Y +LI+ L + K+DDA + F++MLD G
Sbjct: 440 HRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAG 485
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 157/305 (51%), Gaps = 2/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI L ++R ERA E+ +M+ ++ + +T L+ ++ + + E+K
Sbjct: 179 YTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVK 238
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
EPD+V Y + I+ A D A + F E++A +P + +++ L RL
Sbjct: 239 GSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLG 298
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + FGQ + P A YN ++ Y + R +DAY++++ +R+ G P+ +++ +L
Sbjct: 299 EAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSIL 358
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K + +EA ++F M K +P +STY I++ M C +V+ A +I DEM+ G+
Sbjct: 359 TCLGKKRKVDEALTLFDVM--KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGL 416
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + + +++ LC ++L++A + F+ + G P + +L L +G + A
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYR 476
Query: 313 LAQKI 317
L +K+
Sbjct: 477 LFEKM 481
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 164/353 (46%), Gaps = 43/353 (12%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR-- 69
FN ++ L K R V+ A +FD MKK P+I +Y I+++ + NE Y+
Sbjct: 353 SFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRV---NEAYKIR 408
Query: 70 -EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
EM+ G P+++S IM++ C A + +EA +F C P+ +C+LI+GLG +
Sbjct: 409 DEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKK 468
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM---------------- 172
++ +A + F + G + Y +++ + R D +++
Sbjct: 469 GKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLL 528
Query: 173 -------------------MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
++M+ G P+ R+Y I++H L KAG+ E ++F+ MS+
Sbjct: 529 NTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQ 588
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
+ G Y VV C + +VD A + +EMK + V P + Y ++++ L D+LD
Sbjct: 589 Q-GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD 647
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+A F+E GI L+S+L G + A ++ +++ K TP V
Sbjct: 648 EAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 700
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 161/361 (44%), Gaps = 36/361 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL L N ++D LCK+ +E A +F+ +R +P+ +Y L++G G++
Sbjct: 411 MELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGK 470
Query: 61 L------------------------LSMN-----------EVYREMKDDGFEPDVVSYGI 85
+ L N ++Y+EM G PD+
Sbjct: 471 IDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNT 530
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++ A ++ +F +M++ P + LI+GL + E F ++G
Sbjct: 531 YMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQG 590
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F +A YNAVV C S +++ AY +++EM+ + P TY ++ L K R +EAY
Sbjct: 591 FALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAY 650
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ K G E V Y ++ F ++D A I +EM +G+ P ++ +++L+++
Sbjct: 651 MLFEEAKSK-GIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDA 709
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 325
L +++D+A FQ M ++ P +S L L A V Q++ K P
Sbjct: 710 LVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPN 769
Query: 326 V 326
V
Sbjct: 770 V 770
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 1/279 (0%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
E +++ +M +R PD+ ++ + + ++ +MK GF PDV SY I+
Sbjct: 507 EDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSIL 566
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
I+ A + E +F+ M + +++GL ++ +A + + K +
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHV 626
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P TY ++V R+++AY + +E + GI N Y ++ K GR +EAY
Sbjct: 627 HPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYL 686
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ + M +K G P V T+ ++ ++D A+ + MK P + YS LIN L
Sbjct: 687 ILEEMMKK-GLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGL 745
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C K + A ++QEM G+ P ++ + L G
Sbjct: 746 CRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVG 784
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 36/258 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSY------------ 48
M + G + +N ++D LCKS V++A EV ++MK + P + +Y
Sbjct: 586 MSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDR 645
Query: 49 -----------------------TILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+ L++G+G+ + + EM G P+V ++
Sbjct: 646 LDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 705
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+++A + DEA+ F+ M+ C P+ + + LINGL ++ ++A F+ + +K+G
Sbjct: 706 LMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 765
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P TY ++ I DAY + + + G P++ +++ ++ + A R EAY
Sbjct: 766 LIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAY 825
Query: 206 SVFKRMSRKPGTEPTVST 223
VF+ +R G V T
Sbjct: 826 QVFEE-TRLRGCRLNVKT 842
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 105/208 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ LID K ++ A + ++M K+ P++ ++ L++ + + +
Sbjct: 660 GIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEA 719
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ MK+ P+ +Y I+IN C ++Y++A ++EM+ P+ + T+I+G
Sbjct: 720 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISG 779
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +++A F + K G P++ ++NA++ + R +AY++ +E R G N
Sbjct: 780 LAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLN 839
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
+T +L L K E+A V +S
Sbjct: 840 VKTCISLLDALNKTECLEQAAIVGAVLS 867
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 108/242 (44%), Gaps = 1/242 (0%)
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+L ++ +V EM G+ + ++ ++R ++A + M +P +
Sbjct: 121 DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYT 180
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI L ++ AL+ Q + G+E P + +V A ++ A ++DE++
Sbjct: 181 VLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGS 240
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ P+ Y++ + KAG + A+ F + + G P +Y +V + C ++
Sbjct: 241 CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHEL-KAHGLRPDDVSYTSMVWVLCKAGRLGE 299
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ +M+A +P + Y+T+I ++ DDA K + + + G P F+++
Sbjct: 300 AEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILT 359
Query: 300 AL 301
L
Sbjct: 360 CL 361
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 17/251 (6%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP-----HIFCTLINGLGSEKRLSE 133
DVV Y + S K A F A++ +P P + L + L + +++ E
Sbjct: 76 DVVVYVLR-----SLKNPSLAAPFFLLASASSSQPLPPDAYNAVLPFLSHDLAALEKVLE 130
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ G + P A+V S R+ DA+R++ MR P Y +++
Sbjct: 131 EMSHLG------YGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIG 184
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L +A + E A + ++M + G E +V + +VR Q++ A+ + DE+K +
Sbjct: 185 ALAEARQPERALELLRQM-QDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLE 243
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + +Y+ I+ +D A K+F E+ G+RP ++++ L G A L
Sbjct: 244 PDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEEL 303
Query: 314 AQKIDKLRKTP 324
+++ R P
Sbjct: 304 FGQMEAERDVP 314
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 149/305 (48%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID LCK + A+ +F +MK PD+ +Y L++G+G+ L + + EM+
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G DVV+Y +IN ++A F EM+ + T ++ E +
Sbjct: 262 KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVR 321
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ F Q + RG P TY ++V C + R++DA ++DEM G+ PN TY +++
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K G+ A V M R G + Y ++ N + A+ + +EMK +G+
Sbjct: 382 DGLCKEGKVAVADDVLSLMER-AGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGM 440
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ +Y TLI LC KLD+A +M D G+RP +++ + A G E AV
Sbjct: 441 ELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVA 500
Query: 313 LAQKI 317
L KI
Sbjct: 501 LLHKI 505
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 150/317 (47%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + +D CK V A ++F +M+ R P+ +YT L++G +
Sbjct: 295 MKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM G P+VV+Y +M++ C + A ++ ME K + ++ T
Sbjct: 355 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTT 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G K AL + K +G E + Y ++ C ++++A ++ +M CG
Sbjct: 415 LIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT Y ++ KAG+ EA ++ ++ G +P V TY ++ C + A
Sbjct: 475 LRPNTVIYTTIMDAFFKAGKESEAVALLHKIP-DSGLQPNVVTYCALIDGLCKAGSIYEA 533
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +D+M+ G+ P + +Y+TLI+ C L A EM+D G+ ++++L
Sbjct: 534 ISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDG 593
Query: 301 LRDEGMEETAVVLAQKI 317
+G + A L K+
Sbjct: 594 HMKQGDLQGAFALKAKM 610
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 109/249 (43%), Gaps = 1/249 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ + LI LCK + ++ A+ + KM P+ YT +++ + +
Sbjct: 435 MKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGK 494
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ D G +P+VV+Y +I+ C A EA+ F +M P+ ++ T
Sbjct: 495 ESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTT 554
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G LS+A+ + +G + Y +++ + + A+ + +M + G
Sbjct: 555 LIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETG 614
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + Y + +EA V M G P + Y ++R + ++ A
Sbjct: 615 LQLDLYCYTCFISGFCNMNMMQEARGVLSEMI-GTGITPDKTAYNCLIRKYQKLGNMEEA 673
Query: 241 MRIWDEMKA 249
+ +EM++
Sbjct: 674 SSLQNEMES 682
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 32/179 (17%)
Query: 166 INDAYRMMDEMRKCGIGPNTR-------------------------------TYDIVLHH 194
++DA R + +R+ + PNTR T++IV+
Sbjct: 149 LDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPAPNVFTFNIVIDF 208
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K G EA ++F RM + G P V TY ++ + +++ + EM+ G
Sbjct: 209 LCKQGELVEARALFVRM-KAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAA 267
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ Y+ LIN ++ A YF EM +G+ S A EG+ A+ L
Sbjct: 268 DVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKL 326
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 157/306 (51%), Gaps = 2/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID K+ + +RA E+F +M + P++ + L++G + + E + EMK
Sbjct: 396 YNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK 455
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + + +Y +I+A C + A++ F EM ++ C P ++ +LI+GL R++
Sbjct: 456 GKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMN 515
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + K GF + YN ++ +C ++ Y ++ EM + G+ P+T TY+ ++
Sbjct: 516 DASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLI 575
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-KARG 251
+L K G A V ++M K G P+V TY ++ +C VD M+I+ EM
Sbjct: 576 SYLGKTGDFATASKVMEKMI-KEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSK 634
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
V P +Y+ LI++LC + +D A ++M +RP ++ + + +RD+ M A
Sbjct: 635 VPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAF 694
Query: 312 VLAQKI 317
L ++
Sbjct: 695 ELMDRM 700
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 161/322 (50%), Gaps = 19/322 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR------RFDPDIKSYTILLEG 54
M+K ++ + F L++ LCK+R ++ A +VFD+++ + +PD+ + L++G
Sbjct: 307 MEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDG 366
Query: 55 W---GQQKNLLSMNEVYREMKDDGFE-PDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
G++++ LS+ E EMK P+ V+Y +I+ A +D A ELFR+M
Sbjct: 367 LCKVGKEEDGLSLLE---EMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEG 423
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
+P+ TL++GL R+ A++FF + K +G + A TY A++ A+C IN A
Sbjct: 424 VQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAM 483
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ +EM G P+ Y ++ L AGR +A V ++ + G S Y +++
Sbjct: 484 QCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKL-KLAGFSLDRSCYNVLISG 542
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
FC +++ + EM+ GV P Y+TLI+ L A K ++M+ G+RP
Sbjct: 543 FCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPS 602
Query: 291 GQLFSNLKQAL-----RDEGME 307
+ + A DEGM+
Sbjct: 603 VVTYGAIIHAYCSKKNVDEGMK 624
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 34/319 (10%)
Query: 3 KFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
K G + PD +L+ LC + A EV + + D S LL G+ +
Sbjct: 236 KLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGR 295
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
++ MNE+ EM+ P VV++GI++N C A+R DEA+++F +
Sbjct: 296 DIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGK---------- 345
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
G S G EP+ +N ++ C + D +++EM+
Sbjct: 346 -------------------GGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMG 386
Query: 180 GIG-PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I PNT TY+ ++ KAG + A+ +F++M+ + G +P V T +V C + +V
Sbjct: 387 NINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEE-GVQPNVITLNTLVDGLCKHGRVH 445
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A+ ++EMK +G+ Y+ LI++ C + ++ A + F+EML G P ++ +L
Sbjct: 446 RAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLI 505
Query: 299 QALRDEGMEETAVVLAQKI 317
L G A V+ K+
Sbjct: 506 SGLCIAGRMNDASVVVSKL 524
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 133/289 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G++ + N L+D LCK V RA E F++MK + + +YT L+ + N
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EM G PD V Y +I+ C A R ++A + +++ +
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +K+L + + ++ G +P+ TYN ++ + A ++M++M K G
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++H +E +F M P Y I++ C N VD A
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + ++MK + V P Y+ ++ + + L A + M++ RP
Sbjct: 659 ISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRP 707
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 5/281 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + LI C ++ RA + F++M PD Y L+ G +
Sbjct: 458 GLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDA 517
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ V ++K GF D Y ++I+ C K+ + EL EME T KP + TLI+
Sbjct: 518 SVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISY 577
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKCGIGP 183
LG + A + + K G P TY A++ AYC +++ ++ EM + P
Sbjct: 578 LGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPP 637
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
NT Y+I++ L + + A S+ + M K P +TY +++ + A +
Sbjct: 638 NTVIYNILIDALCRNNDVDRAISLMEDMKVKR-VRPNTTTYNAILKGVRDKKMLHKAFEL 696
Query: 244 WDEMKARGVLP---VMHMYSTLINSLCHEDKLDDACKYFQE 281
D M P M + + ++++ +KL + +Q+
Sbjct: 697 MDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQD 737
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G ++ F+ +I +LCK R AQ FD +K RF+PD+ YT L+ GW + +
Sbjct: 239 MEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLK-HRFEPDVVVYTSLVHGWCRAGD 297
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EV+ +MK G +P+V +Y I+I++ C + A ++F EM C P+ F +
Sbjct: 298 ISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNS 357
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ R + L+ + Q K+ G + +YN ++ ++C + +A ++++ M K G
Sbjct: 358 LMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKG 417
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T++ + + K A+ ++ RM ++ +P TY I++RMF + DM
Sbjct: 418 VAPNASTFNFIFGCIAKLHDVNGAHRMYARM-KELNCQPNTLTYNILMRMFAESRSTDMV 476
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG-IRPPGQLFSNLKQ 299
+++ EM V P ++ Y LI+ C ++A K EM++ +RP ++ + +
Sbjct: 477 LKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLE 536
Query: 300 ALRDEG 305
LR G
Sbjct: 537 LLRKAG 542
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 156/327 (47%), Gaps = 4/327 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+D F E +N ++D K R + A V D MK R + + +++ L+ + +
Sbjct: 171 LDGFPASPE--PYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGL 228
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M+D G PD+V++ I+I++ C +R +EA F ++ +P ++ +
Sbjct: 229 AAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLK-HRFEPDVVVYTS 287
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G +S+A + F K G +P TY+ V+ + C +I A+ + EM G
Sbjct: 288 LVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAG 347
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T++ ++ +KAGRTE+ V+ +M R T+S Y ++ C + ++ A
Sbjct: 348 CDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTIS-YNFIIESHCRDENLEEA 406
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+I + M +GV P ++ + + ++ A + + M ++ +P ++ L +
Sbjct: 407 AKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRM 466
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
+ + + + +++D+ + P V+
Sbjct: 467 FAESRSTDMVLKMKKEMDESQVEPNVN 493
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + ++ +ID+LC+ + RA +VF +M DP+ ++ L+ +
Sbjct: 308 MKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGR 367
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +VY +MK G D +SY +I +HC + +EA ++ M P+ F
Sbjct: 368 TEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNF 427
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ + ++ A + + + K+ +P TYN ++ + S + +M EM +
Sbjct: 428 IFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQ 487
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY I++ AY + M + P +S YE V+ + Q+
Sbjct: 488 VEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKH 547
Query: 241 MRIWDEMKARGVL 253
+ D+M ARG +
Sbjct: 548 EELVDKMVARGFV 560
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 34/222 (15%)
Query: 133 EALQFFGQSKKR-GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
++L FF S GF YN ++ + + A+ ++D M+ G+ T+ +
Sbjct: 160 QSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSAL 219
Query: 192 LHHLIKAGRTEEAYSVFKRM---------------------------------SRKPGTE 218
+ ++AG EA F RM S K E
Sbjct: 220 VRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFE 279
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V Y +V +C + A ++ +MK G+ P ++ YS +I+SLC ++ A
Sbjct: 280 PDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDV 339
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
F EM+D G P F++L + G E + + ++ +L
Sbjct: 340 FSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRL 381
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 159/299 (53%), Gaps = 4/299 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD N L+ +LCK ++ A++VFD M + +PD+ SYTI+L G+ + L+ M +
Sbjct: 323 LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTD 382
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M DG P + ++ ++I A+ + D+A+ +F EM KP + T+I L
Sbjct: 383 LFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALC 442
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A++ F Q +G P+ Y+ ++ +C + A ++ E+ G+ +
Sbjct: 443 RIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIV 502
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+ ++++L K GR +A ++F ++ G P Y +++ +C +++ A+R++D
Sbjct: 503 FFGSIINNLCKLGRVMDAQNIFD-LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDA 561
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + G+ P + Y TL+N C ++D+ F+EML GI+P L++ + L + G
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAG 620
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 151/305 (49%), Gaps = 3/305 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEGWGQQKN 60
+ G ++ +N L+ +LC +A ++ M + PD+ +Y +++G+ ++ +
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++EM G PD+V+Y +++A C A+ D+A R+M P +
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G S + EA++ F + +++ P+ N ++G+ C +I +A + D M G
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y I+L+ G + +F M G P + T+ ++++ + +D A
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLM-LGDGIAPVICTFNVLIKAYANCGMLDKA 415
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M I++EM+ GV P + Y T+I +LC K+DDA + F +M+D G+ P + L Q
Sbjct: 416 MIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQG 475
Query: 301 LRDEG 305
G
Sbjct: 476 FCTHG 480
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + + +I LC+ ++ A E F++M + PD +Y L++G+ +
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+ E+ ++G D+V +G +IN C R +A +F P ++
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ +AL+ F G EP Y +V YC RI++ + EM + G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T Y+I++ L +AGRT A F M+ + G TY IV+R N D A
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT-ESGIAMNKCTYSIVLRGLFKNRCFDEA 660
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ E++A V + +T+I + ++++A F + G+ P +S +
Sbjct: 661 IFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN 720
Query: 301 LRDEGMEETA 310
L EG+ E A
Sbjct: 721 LIKEGLVEEA 730
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L ++ ++ LCK+R +++A+ +M + PD +Y L+ G+
Sbjct: 251 GIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEA 310
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V++EM+ PDVV+ ++ + C + EA ++F M P + ++NG
Sbjct: 311 VRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNG 370
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ L + F G P T+N ++ AY ++ A + +EMR G+ P+
Sbjct: 371 YATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPH 430
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY V+ L + G+ ++A F +M + G P Y +++ FC + + A +
Sbjct: 431 VVTYMTVIAALCRIGKMDDAMEKFNQMIDQ-GVVPDKYAYHCLIQGFCTHGSLLKAKELI 489
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
E+ G+ + + ++IN+LC ++ DA F +++G+ P +++ L
Sbjct: 490 SEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 36/260 (13%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ F +I+ LCK V AQ +FD PD Y +L++G+ +
Sbjct: 496 GMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKA 555
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G EP+VV YG ++N +C R DE + LFREM KPS ++ +I+G
Sbjct: 556 LRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDG 615
Query: 125 LGSEKR-----------------------------------LSEALQFFGQSKKRGFEPE 149
L R EA+ F + + + +
Sbjct: 616 LFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKID 675
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
T N ++ + R+ +A + + + G+ P TY I++ +LIK G EEA +F
Sbjct: 676 IITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFS 735
Query: 210 RMSRKPGTEPTVSTYEIVVR 229
M + G EP VVR
Sbjct: 736 SM-QNAGCEPDSRLLNHVVR 754
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 134/329 (40%), Gaps = 45/329 (13%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+R RAQ R P +Y IL++ + + ++ G D +
Sbjct: 97 NRAASRAQ------GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAII 150
Query: 83 YGIMINAHCSAKRYDEAV------------------------------------ELFREM 106
++ C AKR DEA+ +L R M
Sbjct: 151 ASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMM 210
Query: 107 E--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
T C P + T+I+G E +++A F + +RG P+ TY++VV A C +
Sbjct: 211 AEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKAR 270
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ A + +M G+ P+ TY+ +++ G+ +EA VFK M R+ P V
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM-RRQSILPDVVAL 329
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ C ++ A ++D M +G P + Y+ ++N + L D F ML
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVL 313
GI P F+ L +A + GM + A+++
Sbjct: 390 DGIAPVICTFNVLIKAYANCGMLDKAMII 418
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 99/245 (40%), Gaps = 35/245 (14%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N L+D C +E+A VFD M +P++ Y L+ G+ + +
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 590
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKR----------------------------- 95
++REM G +P + Y I+I+ A R
Sbjct: 591 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 650
Query: 96 ------YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+DEA+ LF+E+ A N K T+I G+ +R+ EA F + G P
Sbjct: 651 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 710
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
A TY+ ++ + +A M M+ G P++R + V+ L+K A +
Sbjct: 711 AVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLS 770
Query: 210 RMSRK 214
++ +
Sbjct: 771 KIDER 775
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 126 GSEKRLSEALQFFGQSKKRG---FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GS L+ AL S+ +G P + TY ++ + R A ++ + G+
Sbjct: 86 GSGPALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGL- 144
Query: 183 PNTRTYDIVLHHLIK----AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
R I+ HL+K A RT+EA + + + G P V +Y I+++ C +
Sbjct: 145 ---RVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSG 201
Query: 239 MAMRIWDEMKARGVL--PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
A + M G + P + Y+T+I+ E ++ AC F+EM+ GI P +S+
Sbjct: 202 QADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSS 261
Query: 297 LKQAL-RDEGMEETAVVLAQKIDK 319
+ AL + M++ L Q ++K
Sbjct: 262 VVHALCKARAMDKAEAFLRQMVNK 285
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 68/160 (42%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ ++ L K+R + A +F +++ DI + ++ G Q +
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ + G P V+Y IMI +EA ++F M+ C+P +
Sbjct: 692 VEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNH 751
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
++ L + + A + + +R F E T +V +
Sbjct: 752 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLF 791
>gi|357117116|ref|XP_003560320.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Brachypodium distachyon]
Length = 598
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 154/291 (52%), Gaps = 9/291 (3%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
K+ HV A+ + ++++ R I+ YT LL GW + L V MK G PDVV
Sbjct: 169 KTGHVAAAERLVEELQPR-LPLSIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVV 227
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+ ++ +A R+++A EL REME +C P+ + TL+ GLGS R+ E ++ F +
Sbjct: 228 VFNTLLAGFVAADRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEM 287
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--IGPNTRTYDIVLHHLIKAG 199
+++G P++ TY +V A+C + R++ Y +D M + + P V H K
Sbjct: 288 RRKGCAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLGFFVAHE--KKE 345
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+ EE + +RM R+ P + Y +V+R+ C + AM +W+EM+ G+ P + +
Sbjct: 346 QLEECLELMERM-RECRCPPDLGIYNVVLRLSCKLGETKQAMALWNEMENSGLSPGVDTF 404
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIG--IRPPGQLFSNLKQAL-RDEGME 307
+ ++N L + L DAC +F++M+ G + P + +L AL RDE +E
Sbjct: 405 AIMVNGLVGQGSLVDACSFFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLE 455
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 147/318 (46%), Gaps = 1/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ FN L+ + E A E+ +M++R P+ SYT L++G G +
Sbjct: 217 MKAAGVAPDVVVFNTLLAGFVAADRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSRGR 276
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + V+ EM+ G PD V+YG +++A C A R + E M + P ++
Sbjct: 277 VDEVMRVFVEMRRKGCAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLG 336
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++L E L+ + ++ P+ YN V+ C A + +EM G
Sbjct: 337 FFVAHEKKEQLEECLELMERMRECRCPPDLGIYNVVLRLSCKLGETKQAMALWNEMENSG 396
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ P T+ I+++ L+ G +A S FK M R P + ++ + ++++
Sbjct: 397 LSPGVDTFAIMVNGLVGQGSLVDACSFFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLEL 456
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A +W + +RG + ++ I++L + + DAC Y +ML+ G+ P F+ L +
Sbjct: 457 AKDVWGCIVSRGCELNVGAWTIWIHALYAKKHVKDACSYCLDMLEAGLMPQPDTFAKLMK 516
Query: 300 ALRDEGMEETAVVLAQKI 317
L+ + A + +K+
Sbjct: 517 GLKKLYNRQIAAEITEKV 534
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 6/168 (3%)
Query: 146 FEPEAPT----YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+P P Y A++ +C ++++A ++ M+ G+ P+ ++ +L + A R
Sbjct: 183 LQPRLPLSIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVAADRF 242
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
E+A+ + + M R+ P +Y +++ +VD MR++ EM+ +G P Y T
Sbjct: 243 EDAFELAREMERR-DCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMRRKGCAPDSVTYGT 301
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIR-PPGQLFSNLKQALRDEGMEE 308
L+++ C +L ++ M +R PG + E +EE
Sbjct: 302 LVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLGFFVAHEKKEQLEE 349
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 158/315 (50%), Gaps = 3/315 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI+ LCK A ++ ++ + P++ Y +++ + K + ++Y EM
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 239
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDVV+Y +I+ C + +A +LF +M N P+ + F L++G E+RL
Sbjct: 240 SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLK 299
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA K+G +P+ TYN+++ YC +N A + + + + G+ PN +Y I++
Sbjct: 300 EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMI 359
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H K + +EA ++FK M P V TY ++ C ++ A+++ DEM RGV
Sbjct: 360 HGFCKIKKVDEAMNLFKEMHCN-NIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
Y++++++LC ++D A +M D GI+P ++ L L G E A +
Sbjct: 419 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARI 478
Query: 313 LAQKIDKLRKTPLVD 327
+ + D L K ++D
Sbjct: 479 VFE--DLLVKGYILD 491
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 146/275 (53%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+D CK R ++ A+ V M K+ PD+ +Y L++ + K + ++ +
Sbjct: 285 FNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS 344
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P++ SY IMI+ C K+ DEA+ LF+EM N P + +LI+GL ++S
Sbjct: 345 QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKIS 404
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL+ + RG + TYN+++ A C + +++ A ++ +M+ GI P+ TY ++
Sbjct: 405 YALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLV 464
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR E+A VF+ + K G V+ Y +++ FC + D ++ + +M+ G
Sbjct: 465 DGLCKNGRLEDARIVFEDLLVK-GYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGC 523
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+P Y +I SL +D+ D A K +EM+ G+
Sbjct: 524 IPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 121/288 (42%), Gaps = 10/288 (3%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
Y+ E + NL+S R + +P + +G ++ + + Y V L R+ME
Sbjct: 42 YSQFHENDDNKHNLVS--SFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQME 99
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
I LIN + + + K G+EP T ++ C +I+
Sbjct: 100 FNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIH 159
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
A + D++ G N +Y +++ L K G+T A + +R+ K +P V Y +
Sbjct: 160 QALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKL-VQPNVVMYNTI 218
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ C V+ A ++ EM ++G+ P + Y+ LI+ C K+ DA F +M+ I
Sbjct: 219 IDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENI 278
Query: 288 RPPGQLFSNLKQAL-RDEGMEETAVVLAQ------KIDKLRKTPLVDR 328
P F+ L ++ ++E VLA K D L+DR
Sbjct: 279 NPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDR 326
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P I + +L + + ++ ++R+M+ +G D+V I+IN + + +
Sbjct: 70 PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
++ +P+ TLI GL + ++ +ALQF + GF +Y ++ C
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
+ + A +++ + + PN Y+ ++ + K EA+ ++ M K G P V
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK-GISPDVV 248
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY ++ FC ++ A ++++M + P ++ ++ L++ C E +L +A M
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308
Query: 283 LDIGIRP 289
+ GI+P
Sbjct: 309 MKQGIKP 315
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 150/277 (54%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I TLCK VE A ++ + + PD+ +Y L++G +N E+Y+EMK
Sbjct: 374 YNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMK 433
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD +Y ++I++ C + EA+ L +EME + C + + TLI+G KR++
Sbjct: 434 TKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIA 493
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F Q + +G + TYN ++ C S R+ +A ++MD+M G+ P+ TY+ +L
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLL 553
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAG ++A + + M+ G EP + TY ++ C +V+ A ++ ++ +G+
Sbjct: 554 TYFCKAGDIKKAADIVQTMASD-GCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGI 612
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
H Y+ +I +L + +A + F+EM++ P
Sbjct: 613 NLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAP 649
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 144/279 (51%), Gaps = 2/279 (0%)
Query: 20 LCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
CK +E A ++M R F PD ++ +L+ G + ++ EV M +GF+P
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
D+ +Y +I+ C DEAV++ +M +C P+ + T+I+ L E ++ EA +
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+G P+ TYN+++ C S A + EM+ G P+ TY++++ L
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
G+ +EA ++ K M G V TY ++ FC N ++ A I+D+M+ +GV
Sbjct: 455 GKLQEALNLLKEM-EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
Y+TLI+ LC +++++A + +M+ G+RP +++L
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSL 552
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 151/320 (47%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N LI LCK V+ A +V ++M +R P+ +Y ++ ++ +
Sbjct: 331 GFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEA 390
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ + G PDV +Y +I C ++ + A+EL++EM+ C P + LI+
Sbjct: 391 TKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDS 450
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +L EAL + + G TYN ++ +C + RI +A + D+M G+ N
Sbjct: 451 LCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRN 510
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY+ ++ L K+ R EEA + +M + G P TY ++ FC + A I
Sbjct: 511 SVTYNTLIDGLCKSERVEEASQLMDQMIME-GLRPDKFTYNSLLTYFCKAGDIKKAADIV 569
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M + G P + Y TLI LC +++ A K + + GI ++ + QAL
Sbjct: 570 QTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRR 629
Query: 305 GMEETAVVLAQKIDKLRKTP 324
+ AV L +++ + + P
Sbjct: 630 KRSKEAVRLFREMIEKAEAP 649
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 4/311 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
PD FN L++ L K+ HV+ A EV D M + FDPDI +Y L+ G + + +
Sbjct: 298 FPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVK 357
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V +M + P+ V+Y +I+ C + +EA +L + P + +LI GL
Sbjct: 358 VLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLC 417
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ + A++ + + K +G P+ TYN ++ + C+ ++ +A ++ EM G N
Sbjct: 418 LSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVI 477
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++ K R EA +F +M + G TY ++ C + +V+ A ++ D+
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQ-GVSRNSVTYNTLIDGLCKSERVEEASQLMDQ 536
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G+ P Y++L+ C + A Q M G P + L L G
Sbjct: 537 MIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGR 596
Query: 307 EETAVVLAQKI 317
E A L + I
Sbjct: 597 VEAATKLLRTI 607
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 144/279 (51%), Gaps = 2/279 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ FN LI LC++ + A + ++M+ PD K++T +++G+ ++ NL
Sbjct: 190 GIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGA 249
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFCTLIN 123
V +M + G V+ +++N C R +EA+ EM P + F L+N
Sbjct: 250 MRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVN 309
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL + AL+ + GF+P+ TYN+++ C +++A +++++M + P
Sbjct: 310 GLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSP 369
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
NT TY+ ++ L K + EEA + ++ K G P V TY +++ C + +AM +
Sbjct: 370 NTVTYNTIISTLCKENQVEEATKLALVLTGK-GILPDVCTYNSLIQGLCLSRNHTVAMEL 428
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ EMK +G P Y+ LI+SLC KL +A +EM
Sbjct: 429 YKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEM 467
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 143/308 (46%), Gaps = 5/308 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N LI LC SR+ A E++ +MK + PD +Y +L++ + L
Sbjct: 403 LPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALN 462
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ +EM+ G +V++Y +I+ C KR EA E+F +ME + + TLI+GL
Sbjct: 463 LLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLC 522
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+R+ EA Q Q G P+ TYN+++ +C + I A ++ M G P+
Sbjct: 523 KSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIV 582
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ L KAGR E A + + + K G T Y V++ + A+R++ E
Sbjct: 583 TYGTLIAGLCKAGRVEAATKLLRTIQMK-GINLTPHAYNPVIQALFRRKRSKEAVRLFRE 641
Query: 247 MKARGVLPVMHMYSTLINSLCHEDK-LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + P Y + LC + +A + EML+ G P F L + L
Sbjct: 642 MIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLA 701
Query: 306 MEETAVVL 313
M T + L
Sbjct: 702 MVGTLIKL 709
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + +N LID LCKS VE A ++ D+M PD +Y LL + + +
Sbjct: 502 MELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGD 561
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + M DG EPD+V+YG +I C A R + A +L R ++ +PH +
Sbjct: 562 IKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNP 621
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR-INDAYRMMDEMRKC 179
+I L KR EA++ F + ++ P+A TY V C I +A + EM +
Sbjct: 622 VIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLER 681
Query: 180 GIGPNTRTY 188
G P ++
Sbjct: 682 GYVPEFSSF 690
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + + +N LID CK++ + A+E+FD+M+ + + +Y L++G + +
Sbjct: 467 MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +M +G PD +Y ++ C A +A ++ + M + C+P + T
Sbjct: 527 VEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGT 586
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL R+ A + + +G YN V+ A R +A R+ EM +
Sbjct: 587 LIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKA 646
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P+ TY IV L + G EA M + G P S++ ++ A V
Sbjct: 647 EAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLER-GYVPEFSSFYMLAEGLFSLAMVGT 705
Query: 240 AMRIWD 245
+++ D
Sbjct: 706 LIKLID 711
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 36/314 (11%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
K+ F P + +L G+ +M ++ +EMK D S + I ++ S Y
Sbjct: 81 KQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLY 140
Query: 97 DEAVELFREMEAT-NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+E ++ ME + H + L+N L +L RG P+ T+N
Sbjct: 141 NEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNI 200
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI------------------- 196
++ A C + +I A +M+EM G+ P+ +T+ ++ I
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG 260
Query: 197 ----------------KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
K GR EEA + MS + G P T+ ++V V A
Sbjct: 261 CVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHA 320
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + D M G P ++ Y++LI+ LC ++D+A K +M++ P ++ +
Sbjct: 321 LEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIST 380
Query: 301 LRDEGMEETAVVLA 314
L E E A LA
Sbjct: 381 LCKENQVEEATKLA 394
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 2/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+FG+ ++ N L+DTLCK R V+RA+ F +K PD S+ L+ GW + +
Sbjct: 258 MDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGT-IPPDESSFNTLVHGWCKARM 316
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E +EM+ GF P V +Y +I A+C K + + EM C P+ +
Sbjct: 317 LKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTI 376
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ LG R EAL F + K+ G +A YN ++ C + R+ DA +++EM + G
Sbjct: 377 VMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTG 436
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T++ ++ E A + +M + P + TY ++++ C V
Sbjct: 437 ISPNLTTFNTLISAACDHSLAENALKLLVQMEEQ-SCNPDIKTYTPLLKLCCRRKWVKTL 495
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + + P Y+ L+ LC +L +C + +EM+ G P F + +
Sbjct: 496 LFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQATFDLVLEK 555
Query: 301 LRDEGM 306
L++ M
Sbjct: 556 LKNMHM 561
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 2/278 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
SY ++++ G+ K M + +M + G + + ++ C A R+ +A++ F +M
Sbjct: 199 SYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAIDAFHKM 258
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ L++ L E+ + A F Q+ K P+ ++N +V +C + +
Sbjct: 259 DRFGVAKDTKAMNVLLDTLCKERSVKRARGAF-QALKGTIPPDESSFNTLVHGWCKARML 317
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A M EM + G P+ TY ++ + + M K G P + TY I
Sbjct: 318 KEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTK-GCTPNIITYTI 376
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
V+ + A+ +D++K G Y+ LI LC +L DA +EM G
Sbjct: 377 VMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTG 436
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
I P F+ L A D + E A+ L ++++ P
Sbjct: 437 ISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNP 474
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 158/306 (51%), Gaps = 4/306 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G K + F+ +I +L K R AQ FD +K R F+PD+ YT L+ GW + N
Sbjct: 207 MEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGN 265
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ EMK G +P+V +Y I+I+A C + + A ++F EM C P+ F
Sbjct: 266 ISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 325
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ R + LQ + Q K+ G P+A TYN ++ ++C + +A ++++ ++K G
Sbjct: 326 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK-G 384
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N +++ + + K G A+ +F +M + P TY I++RMF DM
Sbjct: 385 CNLNASSFNPIFGCISKLGDVNSAHRMFAKM-KDLKCRPNTVTYNILMRMFADKKSTDMV 443
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG-IRPPGQLFSNLKQ 299
+++ EM + P + Y LI++ C ++A +F+EM++ +RP ++ + Q
Sbjct: 444 LKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQ 503
Query: 300 ALRDEG 305
LR G
Sbjct: 504 QLRKAG 509
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 159/319 (49%), Gaps = 5/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++FG E + +ID K R + A ++ D MK R + ++++TIL+ + +
Sbjct: 139 LEEFGHSPE--PYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGL 196
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M+D G +PD +++ ++I++ +R EA F ++ +P ++ +
Sbjct: 197 AAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLK-DRFEPDVVVYTS 255
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G +SEA + FG+ K G +P TY+ V+ A C S +I A+ + EM G
Sbjct: 256 LVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVG 315
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T++ ++ +KAGRTE+ V+ +M R G P TY ++ C + ++ A
Sbjct: 316 CDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRL-GCPPDAITYNFLIESHCRDDNLEEA 374
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++I + +K +G ++ + + ++ A + F +M D+ RP ++ L +
Sbjct: 375 VKILNSVK-KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRM 433
Query: 301 LRDEGMEETAVVLAQKIDK 319
D+ + + L +++D+
Sbjct: 434 FADKKSTDMVLKLRKEMDE 452
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
SP + +I+ G ++ A Q K R E T+ +V Y + +A
Sbjct: 145 SPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAF 204
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ M G P+ + +V+ L K R EA S F S K EP V Y +V +C
Sbjct: 205 NRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD--SLKDRFEPDVVVYTSLVHGWCR 262
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+ A R++ EMK G+ P ++ YS +I++LC ++ A F EM+D+G P
Sbjct: 263 AGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAIT 322
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+NL + G E + + ++ +L P
Sbjct: 323 FNNLMRVHVKAGRTEKVLQVYNQMKRLGCPP 353
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 158/306 (51%), Gaps = 4/306 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G K + F+ +I +L K R AQ FD +K R F+PD+ YT L+ GW + N
Sbjct: 172 MEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGN 230
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ EMK G +P+V +Y I+I+A C + + A ++F EM C P+ F
Sbjct: 231 ISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 290
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ R + LQ + Q K+ G P+A TYN ++ ++C + +A ++++ ++K G
Sbjct: 291 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK-G 349
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N +++ + + K G A+ +F +M + P TY I++RMF DM
Sbjct: 350 CNLNASSFNPIFGCISKLGDVNSAHRMFAKM-KDLKCRPNTVTYNILMRMFADKKSTDMV 408
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG-IRPPGQLFSNLKQ 299
+++ EM + P + Y LI++ C ++A +F+EM++ +RP ++ + Q
Sbjct: 409 LKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQ 468
Query: 300 ALRDEG 305
LR G
Sbjct: 469 QLRKAG 474
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 4/212 (1%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+++ G P+ Y MI+ A EAV F ME CKP F +I+ L ++R
Sbjct: 139 LEEFGHSPE--PYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRR 196
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
EA FF K R FEP+ Y ++V +C + I++A R+ EM+ GI PN TY I
Sbjct: 197 AIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSI 255
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
V+ L ++G+ A+ VF M G +P T+ ++R+ + + ++++++MK
Sbjct: 256 VIDALCRSGQITRAHDVFSEMI-DVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRL 314
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
G P Y+ LI S C +D L++A K +
Sbjct: 315 GCPPDAITYNFLIESHCRDDNLEEAVKILNSV 346
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 128/252 (50%), Gaps = 3/252 (1%)
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ M+D G +PD +++ ++I++ +R EA F ++ +P ++ +L++G
Sbjct: 169 FNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLK-DRFEPDVVVYTSLVHGWCR 227
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+SEA + FG+ K G +P TY+ V+ A C S +I A+ + EM G PN T
Sbjct: 228 AGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAIT 287
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++ ++ +KAGRTE+ V+ +M R G P TY ++ C + ++ A++I + +
Sbjct: 288 FNNLMRVHVKAGRTEKVLQVYNQMKRL-GCPPDAITYNFLIESHCRDDNLEEAVKILNSV 346
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
K +G ++ + + ++ A + F +M D+ RP ++ L + D+
Sbjct: 347 K-KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKST 405
Query: 308 ETAVVLAQKIDK 319
+ + L +++D+
Sbjct: 406 DMVLKLRKEMDE 417
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
+A + M G P+ + +V+ L K R EA S F S K EP V Y +
Sbjct: 164 EAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD--SLKDRFEPDVVVYTSL 221
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
V +C + A R++ EMK G+ P ++ YS +I++LC ++ A F EM+D+G
Sbjct: 222 VHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGC 281
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P F+NL + G E + + ++ +L P
Sbjct: 282 DPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPP 318
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ LI+ C+ +++ RA E+ D+MKKR+ P + +Y++++ G + NL
Sbjct: 376 GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGT 435
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N + REM +G +P+ V Y ++ AH R +E+ + M P + +LI G
Sbjct: 436 NAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIG 495
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
KR+ EA + + +R P A TY A + Y + + A R +EM CG+ PN
Sbjct: 496 FCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 555
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFK-RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
Y ++ K G EA+SVF+ +SR+ V TY +++ N ++ A I
Sbjct: 556 VGIYTALIEGHCKEGNVTEAFSVFRFILSRR--VLQDVQTYSVLIHGLSRNGKMHEAFGI 613
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ E++ +G+LP Y++LI+ C + +D A + +EM GI P ++ L L
Sbjct: 614 FSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCK 673
Query: 304 EGMEETAVVLAQKIDKLRKTP 324
G E A L I+ TP
Sbjct: 674 AGEIERAKNLFDDIEGRGLTP 694
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 156/313 (49%), Gaps = 4/313 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N LI CK++ +E A+ +M +RR P+ +Y ++G+ + + +
Sbjct: 483 LPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADR 542
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM G P+V Y +I HC EA +FR + + + LI+GL
Sbjct: 543 YFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS 602
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ EA F + +++G P A TYN+++ C ++ A ++++EM GI P+
Sbjct: 603 RNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIV 662
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+I++ L KAG E A ++F + + G P TY +V +C + A ++ +E
Sbjct: 663 TYNILIDGLCKAGEIERAKNLFDDIEGR-GLTPNCVTYAAMVDGYCKSKNPTAAFQLLEE 721
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M RGV P +Y+ ++N C E+K + A FQEML+ G + ++ + +
Sbjct: 722 MLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKL 781
Query: 307 EETAVVLAQKIDK 319
+E +L + I+K
Sbjct: 782 QEANHLLEEMIEK 794
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 141/328 (42%), Gaps = 54/328 (16%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYT-------------- 49
F + L N L+ L K VE +VFD M + PD+ +YT
Sbjct: 183 FEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKD 242
Query: 50 ---ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+LLE + + L E+ R M D G PD+ +Y I+IN C KR EA + EM
Sbjct: 243 AKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEM 302
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
KP P TYNA++ + I
Sbjct: 303 IDVGLKPEP-----------------------------------ITYNALIDGFMRQGDI 327
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
A+R+ DEM CGI N ++ +L+ + KAG+ E+A + + M K G EP TY +
Sbjct: 328 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK-GVEPDSQTYSL 386
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ C + A + DEMK R + P + YS +IN LC L +EM+ G
Sbjct: 387 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 446
Query: 287 IRPPGQLFSNLKQALRDEG-MEETAVVL 313
++P +++ L A EG +EE+ ++L
Sbjct: 447 LKPNAVVYTTLMTAHAKEGRVEESRMIL 474
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 147/295 (49%), Gaps = 11/295 (3%)
Query: 2 DKFGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ FG+ EL + +N LI CK +V++A ++ ++M + +PDI +Y IL+
Sbjct: 609 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 668
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+G + + ++ +++ G P+ V+Y M++ +C +K A +L EM
Sbjct: 669 DGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVP 728
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P I+ ++N E++ +AL F + ++GF ++N ++ YC S ++ +A +
Sbjct: 729 PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHL 787
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
++EM + PN TY ++ H KAG EA ++ M + PT TY ++ +
Sbjct: 788 LEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER-NVMPTAKTYTSLLHGYH 846
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +++EM A+G+ P Y +I++ C E + +ACK E+L G+
Sbjct: 847 NIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM 901
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 140/301 (46%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +L ++ LI+ C + A+ + +M P+ +Y L++G+ +Q ++
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM G E +++ + ++N C A + ++A+E+ +EM +P + LI G
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ A + + KKR P TY+ ++ C + ++ EM G+ PN
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPN 450
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ K GR EE+ + +RM R+ G P V Y ++ FC +++ A
Sbjct: 451 AVVYTTLMTAHAKEGRVEESRMILERM-REQGILPDVFCYNSLIIGFCKAKRMEEARTYL 509
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM R + P H Y I+ +++ A +YF EML G+ P +++ L + E
Sbjct: 510 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 569
Query: 305 G 305
G
Sbjct: 570 G 570
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 142/298 (47%), Gaps = 2/298 (0%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
Q++ ++ LI L ++ + A +F +++++ P+ +Y L+ G +Q N+ +++
Sbjct: 589 QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQL 648
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
EM G PD+V+Y I+I+ C A + A LF ++E P+ + +++G
Sbjct: 649 LEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCK 708
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
K + A Q + RG P+A YN ++ C + A + EM + G +T +
Sbjct: 709 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVS 767
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++ ++ K+G+ +EA + + M K P TY ++ C + A R+W EM
Sbjct: 768 FNTLIEGYCKSGKLQEANHLLEEMIEKQFI-PNHVTYTSLIDHNCKAGMMGEAKRLWLEM 826
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ R V+P Y++L++ + + + F+EM+ GI P + + A EG
Sbjct: 827 QERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 884
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 135/358 (37%), Gaps = 76/358 (21%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY--- 68
D R I TL S + + E D KK + DI IL G K LL N Y
Sbjct: 34 DSVREITTLLNSHNWQALMESSDIPKK--LNTDIIRSVILQNQVGDPKRLL--NFFYWSQ 89
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------------------EATN 110
+M + D+ + C++ Y A +L + + + N
Sbjct: 90 HKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCN 149
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
P+ IF L++ L EA+ F K F P + N+++G ++ +
Sbjct: 150 GSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 209
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP--------------- 215
++ D M + P+ TY ++ K G ++A V M K
Sbjct: 210 KVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVD 269
Query: 216 -GTEPTVSTYEIVVRMFC--------------------------YNAQVD---------M 239
G P + TY+I++ FC YNA +D
Sbjct: 270 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 329
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A RI DEM A G+ + +++TL+N +C K++ A + QEM++ G+ P Q +S L
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 387
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 100/241 (41%), Gaps = 42/241 (17%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ CK E+A ++F +M ++ F + S+ L+EG+ + L N + EM
Sbjct: 734 YNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMI 792
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ F P+ V+Y +I+ +C A EA L+ EM+ N P+ + +L++G + +S
Sbjct: 793 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 852
Query: 133 EALQFF-----------------------------------------GQSKKRGFEPEAP 151
E F G K GF P
Sbjct: 853 EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLP 912
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
T + + + + +++A ++ M K G NT + ++ +E++ ++ K+M
Sbjct: 913 TCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972
Query: 212 S 212
+
Sbjct: 973 A 973
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 147/290 (50%), Gaps = 3/290 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+FG+K + D + L+ TLCK +HV +AQ+ FD++K F K+Y+IL+ GWG+ +
Sbjct: 170 MDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSH-FLLTTKTYSILINGWGKIGD 228
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E++ M + G D+++Y ++ A C DEA++ +M + +P +
Sbjct: 229 SGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSI 288
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I + A + ++ P TYN ++ C ++ +AY+++DEM G
Sbjct: 289 FIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSG 348
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T +Y+ + + A + RM K P TY +V+++ + D A
Sbjct: 349 LKPDTWSYNAIQAYHCDHCEVNRALKLISRM-EKDVCFPDRHTYNMVLKLLIRIGRFDKA 407
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRP 289
+W+ M + P + YS +I+ LC + KL++ACKYF M+D GI P
Sbjct: 408 TEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPP 457
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 124/281 (44%), Gaps = 4/281 (1%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS--YGIMINAHCSAKRYDE 98
F ++S+ IL+E G+ K + + E ++ + + + I+ A+ A D
Sbjct: 103 FQHSVQSFHILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRADLPDG 162
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
A+ F M+ KPS L+ L +K + +A QFF Q K F TY+ ++
Sbjct: 163 AIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSH-FLLTTKTYSILIN 221
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
+ A + D M + G + Y+ +L L K G +EA M K E
Sbjct: 222 GWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKK-VE 280
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P TY I +R +C V A + D+M+ +LP + Y+ +I LC K+++A +
Sbjct: 281 PDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQL 340
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
EM+ G++P ++ ++ D A+ L +++K
Sbjct: 341 LDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEK 381
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 7/211 (3%)
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT--YNAVVGAYCWSMRINDAYRMMDE 175
F L+ LG K+ + F ++++ + + + AY + + A R
Sbjct: 110 FHILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRADLPDGAIRSFVR 169
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M + GI P+ D++L+ L K +A F ++ K T TY I++ +
Sbjct: 170 MDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQV--KSHFLLTTKTYSILINGWGKIG 227
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
A ++D M +G + Y+ L+ +LC +D+A + +ML + P +S
Sbjct: 228 DSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYS 287
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
++ D +A + +DK+R+ L+
Sbjct: 288 IFIRSYCDANNVHSAFGV---LDKMRRCNLL 315
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 153/297 (51%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N L+D LCK+ A+++FD M KR +PDI +Y LL+G+ + L+ M
Sbjct: 296 GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM 355
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G PD + I+I A+ ++ DEA+ +F +M P+ + +I
Sbjct: 356 HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGI 415
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +A+ +F Q G P Y +++ + C + + A ++ EM GI N
Sbjct: 416 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ ++H K GR E+ +F M R G +P V TY ++ +C ++D A ++
Sbjct: 476 TIFFNSIIHSHCKEGRVIESEKLFDLMVR-IGVKPNVITYSTLIDGYCLAGKMDEATKLL 534
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M + G+ P Y+TLIN C ++DDA F+EM+ G+ P ++ + Q L
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 156/301 (51%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + +I+ K ++A + +M RR PD+ +Y+ ++ + + +
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV M +G P+ ++Y +++ +CS+++ EA+ ++M + +P + +L++
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R +EA + F KRG EP+ TY ++ Y + + + ++D M + GI P+
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++I++ K + +EA VF +M R+ G P V TY V+ + C + VD AM +
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKM-RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++M G+ P + +Y++LI+SLC DK D A + EMLD GI F+++ + E
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489
Query: 305 G 305
G
Sbjct: 490 G 490
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 144/289 (49%), Gaps = 4/289 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFD---PDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
L+ LC + A E+ M R PD+ SYT ++ G+ ++ + Y EM
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D PDVV+Y +I A C + D+A+E+ M P+ + ++++G S ++
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ F + + G EP+ TYN+++ C + R +A ++ D M K G+ P+ TY +L
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
G E +++ M R G P + I++ + +VD AM ++ +M+ G+
Sbjct: 344 QGYATKGALVEMHALLDLMVRN-GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + Y +I LC +DDA YF++M+D G+ P ++++L +L
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 145/292 (49%), Gaps = 1/292 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ ++ ++ +I LCK + +++A EV M K P+ +Y +L G+ +
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++M+ DG EPDVV+Y +++ C R EA ++F M +P +CTL+ G
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++ L E + G P+ +N ++ AY ++++A + +MR+ G+ PN
Sbjct: 347 ATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNV 406
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY V+ L K+G ++A F++M + G P + Y ++ C + D A +
Sbjct: 407 VTYGAVIGILCKSGSVDDAMLYFEQMIDE-GLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
EM RG+ ++++I+S C E ++ ++ K F M+ IG++P +S L
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 132/272 (48%), Gaps = 2/272 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I + CK V ++++FD M + P++ +Y+ L++G+ + ++ M
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD V+Y +IN +C R D+A+ LF+EM ++ P+ + ++ GL +R +
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + K G + E TYN ++ C + ++A RM + + TRT++I++
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 658
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F +S G P V TY ++ ++ ++ M+ G
Sbjct: 659 GALLKVGRNDEAKDLFAALSAN-GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 717
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
M ++++ L + A Y M+D
Sbjct: 718 TANSRMLNSIVRKLLQRGDITRAGTYLS-MID 748
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 6/308 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL-SMNEVYREM 71
+ LI C++ ++ + K+ F + ++T LL+G K +M+ V R M
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME---ATNCKPSPHIFCTLINGLGSE 128
+ PDV S I++ C R EA+EL M P + T+ING E
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+A + + R P+ TY++++ A C ++ A ++ M K G+ PN TY
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ +LH + + +EA K+M R G EP V TY ++ C N + A +I+D M
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGME 307
RG+ P + Y TL+ + L + M+ GI P +F+ L A + E ++
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388
Query: 308 ETAVVLAQ 315
E +V ++
Sbjct: 389 EAMLVFSK 396
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 143/340 (42%), Gaps = 36/340 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + +I LCKS V+ A F++M P+I YT L+
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM D G + + + +I++HC R E+ +LF M KP+ + T
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ EA + G +P+ TYN ++ YC R++DA + EM G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Query: 181 IGPN-------------TR----------------------TYDIVLHHLIKAGRTEEAY 205
+ PN TR TY+I+LH L K T+EA
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ + + T+ I++ + D A ++ + A G++P + YS + +
Sbjct: 637 RMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAEN 695
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
L + L++ F M + G ++ +++ + L G
Sbjct: 696 LIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 735
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 9/286 (3%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG---FEPDVVSY 83
E A+ VF+++ +R I L + +++ Y M G P V +Y
Sbjct: 32 EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 90
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF-FGQSK 142
GI+I C A R D + + F L+ GL ++KR S+A+ +
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAY---RMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ P+ + ++ C R +A MM + R G P+ +Y V++ K G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+++AYS + M + P V TY ++ C +D AM + M GV+P Y
Sbjct: 211 DSDKAYSTYHEMLDRR-ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+++++ C ++ +A + ++M G+ P +++L L G
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 64/152 (42%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G + EL +N ++ LCK+ + A +F + + +++ I++ +
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ + +G PDV +Y +M +E +LF ME C + + +
Sbjct: 667 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 726
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
++ L ++ A + ++ F EA T
Sbjct: 727 IVRKLLQRGDITRAGTYLSMIDEKHFSLEAST 758
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 163/314 (51%), Gaps = 4/314 (1%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNE 66
L FN +I+ LCK + +A ++ + MK R ++ +Y L++G+ G+ + +
Sbjct: 163 LISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADA 222
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ +EM+ DG P+ V++ I+I+ C K A+++F EM KP+ + +LINGL
Sbjct: 223 ILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLC 282
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ +++EA Q +P T+NA++ +C + + A + D+M K GI PN
Sbjct: 283 NNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT 342
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+I++ K E+A+++++ M K G P VSTY ++ C ++ A + E
Sbjct: 343 TYNILIDAYCKDENMEDAFALYRIMLGK-GVCPDVSTYNCLIAGLCRKGDLEAARNLVSE 401
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M + + + Y+ LI+SLC++ ++ A + EM G++P ++ + EG
Sbjct: 402 MDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGN 461
Query: 307 EETAVVLAQKIDKL 320
A+ L +++K+
Sbjct: 462 LRAALNLRSQMEKV 475
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 142/285 (49%), Gaps = 4/285 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVER---AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
G+ + +N LID CK + + A + +M+ P+ ++ IL++G+ + KN+
Sbjct: 193 GVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNV 252
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ +V+ EM G +P+VV+Y +IN C+ + +EA L +M + KP+ L
Sbjct: 253 SAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNAL 312
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+NG K + +A + F K+G P TYN ++ AYC + DA+ + M G+
Sbjct: 313 LNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGV 372
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY+ ++ L + G E A ++ M K + + TY I++ C ++ A+
Sbjct: 373 CPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH-LKADLITYNILIDSLCNKGEMKKAL 431
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
R+ DEM +G+ P Y+T+I+ C E L A +M +G
Sbjct: 432 RLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 144/282 (51%), Gaps = 4/282 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+GLK + N L+ L K + + V+ +M +RR +P + S+ I++ G + L
Sbjct: 122 YGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNK 181
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD---EAVELFREMEATNCKPSPHIFCT 120
++ +MK G +V++Y +I+ +C + +A + +EM A P+ F
Sbjct: 182 AGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNI 241
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +K +S A++ F + ++G +P TYN+++ C + ++N+A + D+M
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T++ +L+ K ++A +F M K G P V+TY I++ +C + ++ A
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMP-KQGITPNVTTYNILIDAYCKDENMEDA 360
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ M +GV P + Y+ LI LC + L+ A EM
Sbjct: 361 FALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEM 402
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 130/259 (50%), Gaps = 1/259 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G+K + +N LI+ LC + V A + D+M P+I ++ LL G+ + K
Sbjct: 262 MNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKM 321
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ +M G P+V +Y I+I+A+C + ++A L+R M P +
Sbjct: 322 VKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC 381
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL + L A + + + + TYN ++ + C + A R++DEM + G
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG 441
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ K G A ++ +M K G V+TY ++++ FC +++ A
Sbjct: 442 LKPSQLTYNTMIDGYCKEGNLRAALNLRSQM-EKVGRLANVATYNVLIKGFCKKDKLEDA 500
Query: 241 MRIWDEMKARGVLPVMHMY 259
+ +EM +G++P Y
Sbjct: 501 NGLLNEMLEKGLIPNRMTY 519
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 31 EVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAH 90
E F + + S L+ G + + M VY+EM EP ++S+ I+IN
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLING---LGSEKRLSEALQFFGQSKKRGFE 147
C + ++A ++ +M+ + + TLI+G +G ++ +A + + G
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P T+N ++ +C ++ A ++ EM + G+ PN TY+ +++ L G+ EA ++
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+M +P + T+ ++ FC N V A ++D+M +G+ P + Y+ LI++ C
Sbjct: 294 RDQMVNSC-LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYC 352
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
++ ++DA ++ ML G+ P ++ L L +G E A L ++D
Sbjct: 353 KDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMD 403
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 19/262 (7%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
LK + N L++ CK++ V++A E+FD M K+ P++ +Y IL++ + + +N+
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAF 361
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+YR M G PDV +Y +I C + A L EM+ + K + LI+ L
Sbjct: 362 ALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSL 421
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++ + +AL+ + ++G +P TYN ++ YC + A + +M K G N
Sbjct: 422 CNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANV 481
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY++++ K + E+A + M K G P TYEIV +
Sbjct: 482 ATYNVLIKGFCKKDKLEDANGLLNEMLEK-GLIPNRMTYEIVT----------------E 524
Query: 246 EMKARGVLPVM--HMYSTLINS 265
EM +G +P + H+Y ++S
Sbjct: 525 EMMEKGFVPDIEGHLYKVAVSS 546
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + +N LID CK ++E A ++ M + PD+ +Y L+ G ++ +
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + EM + D+++Y I+I++ C+ +A+ L EM KPS + T
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT 451
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G E L AL Q +K G TYN ++ +C ++ DA +++EM + G
Sbjct: 452 MIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKG 511
Query: 181 IGPNTRTYDIVLHHLIKAG 199
+ PN TY+IV +++ G
Sbjct: 512 LIPNRMTYEIVTEEMMEKG 530
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 113/234 (48%), Gaps = 18/234 (7%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR-------EMEATNCKPSPHIF 118
++ + D F + + I++ A+ R E F+ ++ T+C P
Sbjct: 79 QILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNP----- 133
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L++GL + + + + +R EP ++N V+ C ++N A ++++M+
Sbjct: 134 --LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKV 191
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAY---SVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
G+ N TY+ ++ K G+ + Y ++ K M R G P T+ I++ FC +
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEM-RADGICPNEVTFNILIDGFCKDK 250
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
V AM+++ EM +GV P + Y++LIN LC+ K+++A +M++ ++P
Sbjct: 251 NVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKP 304
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 144/293 (49%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +N +I LCK+ V A++V MK +R PD YT L+ G+G+ N+
Sbjct: 317 GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVE 376
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ EMK PD V+Y MI+ C A + EA +LF EM + KP + LI+G
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDG 436
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EA Q ++G P TY A+V C ++ A ++ EM + G+ PN
Sbjct: 437 YCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPN 496
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ L K G E+A + + M G P TY ++ +C ++ A +
Sbjct: 497 VCTYNALINGLCKVGNIEQAVKLMEEMDL-AGFFPDTITYTTIMDAYCKMGEMAKAHELL 555
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
M +G+ P + ++ L+N C L+D + + MLD GI P F++L
Sbjct: 556 RIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSL 608
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 149/289 (51%), Gaps = 1/289 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N ++ LC+ V+ A + +M+ R PD+ SY+++++G+ Q + L + ++ E+
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G +P+ +Y +I+ C R EA ++ R M+ P ++ TLI+G G +
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
S + F + K++ P+ TY +++ C + ++ +A ++ EM G+ P+ TY +
Sbjct: 374 SVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTAL 433
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ KAG +EA+S+ +M K G P V TY +V C +VD+A + EM +G
Sbjct: 434 IDGYCKAGEMKEAFSLHNQMVEK-GLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ P + Y+ LIN LC ++ A K +EM G P ++ + A
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 142/309 (45%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + + LID CK+ ++ A + ++M ++ P++ +YT L++G + +
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
NE+ EM + G +P+V +Y +IN C ++AV+L EM+ P + T+++
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+++A + +G +P T+N ++ +C S + D R++ M GI PN
Sbjct: 542 YCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN 601
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ ++K M + G P +TY I+++ C + A +
Sbjct: 602 ATTFNSLMKQYCIRNNMRATIEIYKGMHAQ-GVVPDTNTYNILIKGHCKARNMKEAWFLH 660
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM +G Y++LI K ++A K F+EM G +++ +E
Sbjct: 661 KEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEE 720
Query: 305 GMEETAVVL 313
G E + L
Sbjct: 721 GNWENTLEL 729
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 140/272 (51%), Gaps = 1/272 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
SY I+L Q + + + +M+ G PDVVSY ++++ +C ++ + ++L E+
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ KP+ + + ++I+ L R+ EA Q K + P+ Y ++ + S +
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+ Y++ DEM++ I P+ TY ++H L +AG+ EA +F M K G +P TY
Sbjct: 374 SVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK-GLKPDEVTYTA 432
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ +C ++ A + ++M +G+ P + Y+ L++ LC ++D A + EM + G
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
++P ++ L L G E AV L +++D
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 111/228 (48%), Gaps = 1/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + +N LI+ LCK ++E+A ++ ++M F PD +YT +++ + +
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E+ R M D G +P +V++ +++N C + ++ L + M P+ F +
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ + ++ + +G P+ TYN ++ +C + + +A+ + EM + G
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
+Y+ ++ K + EEA +F+ M R G Y+I V
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKLFEEM-RTHGFIAEKEIYDIFV 714
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 153/297 (51%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N L+D LCK+ A+++FD M KR +PDI +Y LL+G+ + L+ M
Sbjct: 296 GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM 355
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G PD + I+I A+ ++ DEA+ +F +M P+ + +I
Sbjct: 356 HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGI 415
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +A+ +F Q G P Y +++ + C + + A ++ EM GI N
Sbjct: 416 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ ++H K GR E+ +F M R G +P V TY ++ +C ++D A ++
Sbjct: 476 TIFFNSIIHSHCKEGRVIESEKLFDLMVR-IGVKPNVITYSTLIDGYCLAGKMDEATKLL 534
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M + G+ P Y+TLIN C ++DDA F+EM+ G+ P ++ + Q L
Sbjct: 535 SSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 156/301 (51%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + +I+ K ++A + +M RR PD+ +Y+ ++ + + +
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV M +G P+ ++Y +++ +CS+++ EA+ ++M + +P + +L++
Sbjct: 251 MEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDY 310
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R +EA + F KRG EP+ TY ++ Y + + + ++D M + GI P+
Sbjct: 311 LCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPD 370
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++I++ K + +EA VF +M R+ G P V TY V+ + C + VD AM +
Sbjct: 371 HHVFNILICAYAKQEKVDEAMLVFSKM-RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++M G+ P + +Y++LI+SLC DK D A + EMLD GI F+++ + E
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489
Query: 305 G 305
G
Sbjct: 490 G 490
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 144/289 (49%), Gaps = 4/289 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFD---PDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
L+ LC + A E+ M R PD+ SYT ++ G+ ++ + Y EM
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D PDVV+Y +I A C + D+A+E+ M P+ + ++++G S ++
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ F + + G EP+ TYN+++ C + R +A ++ D M K G+ P+ TY +L
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
G E +++ M R G P + I++ + +VD AM ++ +M+ G+
Sbjct: 344 QGYATKGALVEMHALLDLMVRN-GIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + Y +I LC +DDA YF++M+D G+ P ++++L +L
Sbjct: 403 NPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 145/292 (49%), Gaps = 1/292 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ ++ ++ +I LCK + +++A EV M K P+ +Y +L G+ +
Sbjct: 227 ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++M+ DG EPDVV+Y +++ C R EA ++F M +P +CTL+ G
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++ L E + G P+ +N ++ AY ++++A + +MR+ G+ PN
Sbjct: 347 ATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNV 406
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY V+ L K+G ++A F++M + G P + Y ++ C + D A +
Sbjct: 407 VTYGAVIGILCKSGSVDDAMLYFEQMIDE-GLTPNIIVYTSLIHSLCIFDKWDKAEELIL 465
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
EM RG+ ++++I+S C E ++ ++ K F M+ IG++P +S L
Sbjct: 466 EMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 140/308 (45%), Gaps = 6/308 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL-SMNEVYREM 71
+ LI C++ ++ + K+ F + ++T LL+G K +M+ V R M
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM---EATNCKPSPHIFCTLINGLGSE 128
+ PDV S I++ C R EA+EL M P + T+ING E
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+A + + R P+ TY++++ A C ++ A ++ M K G+ PN TY
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ +LH + + +EA K+M R G EP V TY ++ C N + A +I+D M
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMT 328
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGME 307
RG+ P + Y TL+ + L + M+ GI P +F+ L A + E ++
Sbjct: 329 KRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVD 388
Query: 308 ETAVVLAQ 315
E +V ++
Sbjct: 389 EAMLVFSK 396
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 131/272 (48%), Gaps = 2/272 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I + CK V ++++FD M + P++ +Y+ L++G+ + ++ M
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD V+Y +IN +C R D+A+ LF+EM ++ P+ + ++ GL +R +
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + K G + E TYN ++ C + ++A RM + + TRT++I++
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 658
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F S G P TY ++ ++ +++ M+ G
Sbjct: 659 GALLKVGRNDEAKDLFVAFSSN-GLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGC 717
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
M + ++ L ++ A Y M+D
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLS-MID 748
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 36/340 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + +I LCKS V+ A F++M P+I YT L+
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM D G + + + +I++HC R E+ +LF M KP+ + T
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ EA + G +P+ TYN ++ YC R++DA + EM G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576
Query: 181 IGPN-------------TR----------------------TYDIVLHHLIKAGRTEEAY 205
+ PN TR TY+I+LH L K T+EA
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEAL 636
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ + + T+ I++ + D A ++ + G++P Y + +
Sbjct: 637 RMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAEN 695
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ + L++ + F M D G + + + + L G
Sbjct: 696 IIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRG 735
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 9/286 (3%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG---FEPDVVSY 83
E A+ VFD++ +R I L + +++ Y M G P V +Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 90
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF-FGQSK 142
GI+I C A R D + + F L+ GL ++KR S+A+ +
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAY---RMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ P+ + ++ C R +A MM + R G P+ +Y V++ K G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEG 210
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+++AYS + M + P V TY ++ C +D AM + M GV+P Y
Sbjct: 211 DSDKAYSTYHEMLDRR-ISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+++++ C ++ +A + ++M G+ P +++L L G
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 89/214 (41%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + +N LI+ C+ ++ A +F +M P+I +Y I+L+G +
Sbjct: 537 MFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 596
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+Y + G + ++ +Y I+++ C DEA+ +F+ + T+ + F
Sbjct: 597 TAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 656
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L R EA F G P TY + + + ++ M G
Sbjct: 657 MIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNG 716
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ + ++ L++ G A + + K
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 147/286 (51%), Gaps = 5/286 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G + +L F L+ +LC+ +HVE A+ +F + KK F P IKS+ I+L GW + +L
Sbjct: 192 YGFELDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVKGSLAD 250
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V+ E+ +PD+ +YG IN+ + + AV+LF M P I +I+
Sbjct: 251 AKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIID 310
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +KR+ EAL+ FG+ RG + + TYN ++ +C R+ Y ++D+M G+ P
Sbjct: 311 QLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSP 370
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY +L + ++ S+ +RM K G TY +++ ++ +
Sbjct: 371 NNMTYSYILK---TTEKPKDVISLMQRME-KSGCRLDSDTYNLILNLYVSWDYEKGVQLV 426
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
WDEM+ G P ++ +++ L DKLD+A Y++ M G+ P
Sbjct: 427 WDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTP 472
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 132/276 (47%), Gaps = 7/276 (2%)
Query: 46 KSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS--YGIMINAHCSAKRYDEAVELF 103
++YT +L+ G+ K + M +++ E+ + + V + + +++N + A + EA+++F
Sbjct: 127 RAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMF 186
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
+ + + F L+ L K + EA F Q KK F P ++N ++ +C
Sbjct: 187 YKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVK 245
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ DA R+ +E+ + P+ TY ++ L K+G+ A +F M K G P V+
Sbjct: 246 GSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEK-GINPDVAI 304
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++ C+ ++ A+ I+ EM RG + Y+TLI C ++++ + +M
Sbjct: 305 CNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDME 364
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
G+ P +S + L+ + + L Q+++K
Sbjct: 365 VKGVSPNNMTYSYI---LKTTEKPKDVISLMQRMEK 397
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + ++ +N LI CK +E+ E+ D M+ + P+ +Y+ +L+ + K+
Sbjct: 328 MNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKD 387
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL-FREMEATNCKPSPHIFC 119
++S+ + M+ G D +Y +++N + S Y++ V+L + EME P F
Sbjct: 388 VISL---MQRMEKSGCRLDSDTYNLILNLYVSWD-YEKGVQLVWDEMERNGSGPDQRSFT 443
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+++GL S +L EAL ++ + RG PE T
Sbjct: 444 IMVHGLHSHDKLDEALHYYRTMESRGMTPEPRT 476
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 145/290 (50%), Gaps = 8/290 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + + LI+ LC+ R + A+E+ +M+ + P + +YT ++ G Q N
Sbjct: 211 MSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNN 270
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +MKD EP+V +Y +++ C A ++ M +P+ + T
Sbjct: 271 VDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYST 330
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL +E +++EAL+ F + K +GF+P+A Y +V C R +A +DEM CG
Sbjct: 331 LLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCG 390
Query: 181 IGPN-------TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
I PN RT++ V+H L + A+ ++ + + G TV T+ +++ FC
Sbjct: 391 IKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTR-GISITVDTFNSLLKCFCN 449
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+ RI DEM G +P M+ST++N C E K DA K Q L
Sbjct: 450 KKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDAMKLLQLQL 499
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 146/307 (47%), Gaps = 13/307 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M F K + ++ L + ++ A + M+K P + S +L++ + KN
Sbjct: 140 MQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFC--KN 197
Query: 61 LLSMNE---VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+M++ ++R M + G EPD +YG +IN C + EA EL +EME C PS
Sbjct: 198 SGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVT 257
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ ++I+GL + EA++ K + EP TY++++ +C + + A +++ M
Sbjct: 258 YTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMI 317
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ + PN +Y +L+ L G+ EA +F RM + G +P Y +V C ++
Sbjct: 318 QKRLRPNMISYSTLLNGLCNEGKINEALEIFDRM-KLQGFKPDAGLYGKIVNCLCDVSRF 376
Query: 238 DMAMRIWDEMKARGVLP-----VMHM--YSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
A DEM G+ P +H+ ++ +I+ LC + + A + + +L GI
Sbjct: 377 QEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISIT 436
Query: 291 GQLFSNL 297
F++L
Sbjct: 437 VDTFNSL 443
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 130/300 (43%), Gaps = 2/300 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K +L F+ +I L + A+ + D+MK+ + D + +G+ L
Sbjct: 74 GFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDS 133
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ +M+D +P SY ++ + A +R+M P+ LI
Sbjct: 134 IRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKA 193
Query: 125 L-GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ + +A+ F G EP++ TY ++ C I +A ++ EM G P
Sbjct: 194 FCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSP 253
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY ++H L + +EA + + M K EP V TY ++ FC A I
Sbjct: 254 SVVTYTSIIHGLCQLNNVDEAMRLLEDMKDK-NIEPNVFTYSSLMDGFCKTGHSSRARDI 312
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ M + + P M YSTL+N LC+E K+++A + F M G +P L+ + L D
Sbjct: 313 LELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCD 372
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 112/238 (47%), Gaps = 2/238 (0%)
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+GF+ D+ ++ +MI+ SA ++ A L M+ + I ++ G + +
Sbjct: 73 NGFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLD 132
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+++ F + + +P +Y +V+ ++ A+R +MRK GI P + ++++
Sbjct: 133 SIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIK 192
Query: 194 HLIK-AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K +G ++A +F+ MS G EP TY ++ C + A + EM+ +G
Sbjct: 193 AFCKNSGTMDKAMHLFRTMSNH-GCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGC 251
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P + Y+++I+ LC + +D+A + ++M D I P +S+L G A
Sbjct: 252 SPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRA 309
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 152/306 (49%), Gaps = 3/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G ++ F+ +I LCK R AQ FD +K +F+PD+ YT L+ GW + +
Sbjct: 209 MEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLK-HKFEPDVIVYTSLVHGWCRAGD 267
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+REMK G P+V +Y I+I+A C + + A ++F EM C P+ F
Sbjct: 268 ISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNN 327
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI R + LQ + Q K+ + TYN ++ +C + +A ++++ M K
Sbjct: 328 LIRVHLRAGRTEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKND 387
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +++ + + K+ A+ +F RM ++ G +P TY I++RMF DM
Sbjct: 388 CTPNASSFNPIFRCIAKSQDVNGAHRMFARM-KEVGCKPNTVTYNILMRMFAVPKSADMI 446
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG-IRPPGQLFSNLKQ 299
++ EM V P + Y LI C + A +F+EM+D I+P L+ + +
Sbjct: 447 FKLKKEMDEEEVEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLE 506
Query: 300 ALRDEG 305
LR G
Sbjct: 507 ELRKAG 512
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 131/285 (45%), Gaps = 2/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N +ID K + A + D MK R + + ++++L+ + +
Sbjct: 143 GFEHSPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEA 202
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M+D G D++++ +I+ C +R EA F ++ +P ++ +L++G
Sbjct: 203 VHAFNRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLK-HKFEPDVIVYTSLVHG 261
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+SEA F + K G P TY+ V+ A C S +I A+ + EM G PN
Sbjct: 262 WCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPN 321
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ T++ ++ ++AGRTE+ V+ +M R + TY ++ C + + A+++
Sbjct: 322 SVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLI-TYNFLIETHCKDDNLGEAIKVL 380
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ M P ++ + + ++ A + F M ++G +P
Sbjct: 381 NSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMKEVGCKP 425
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 114/251 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + ++ +ID LC+S + RA +VF +M +P+ ++ L+ +
Sbjct: 278 MKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGR 337
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +VY +MK D+++Y +I HC EA+++ M +C P+ F
Sbjct: 338 TEKVLQVYNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNP 397
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ + + ++ A + F + K+ G +P TYN ++ + + +++ EM +
Sbjct: 398 IFRCIAKSQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEE 457
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ G AY F+ M + +P++ Y++V+ Q+
Sbjct: 458 VEPNFNTYRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKH 517
Query: 241 MRIWDEMKARG 251
+ D+M RG
Sbjct: 518 EELVDKMVERG 528
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
SP + +I+ G K+ A K R E T++ +V Y + +A
Sbjct: 147 SPQPYNEMIDLAGKVKQFGLAWYLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAF 206
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ M G + + V+ L K R EA S F + K EP V Y +V +C
Sbjct: 207 NRMEDYGCNADIIAFSNVISILCKKRRAVEAQSFFDNLKHK--FEPDVIVYTSLVHGWCR 264
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+ A ++ EMK G+ P ++ YS +I++LC ++ A F EMLD G P
Sbjct: 265 AGDISEAESVFREMKMAGISPNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVT 324
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLR 321
F+NL + G E + + ++ +LR
Sbjct: 325 FNNLIRVHLRAGRTEKVLQVYNQMKRLR 352
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 147/286 (51%), Gaps = 5/286 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G + +L F L+ +LC+ +HVE A+ +F + KK F P IKS+ I+L GW + +L
Sbjct: 212 YGFELDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVKGSLAD 270
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V+ E+ +PD+ +YG IN+ + + AV+LF M P I +I+
Sbjct: 271 AKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIID 330
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +KR+ EAL+ FG+ RG + + TYN ++ +C R+ Y ++D+M G+ P
Sbjct: 331 QLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSP 390
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY +L + ++ S+ +RM K G TY +++ ++ +
Sbjct: 391 NNMTYSYILK---TTEKPKDVISLMQRME-KSGCRLDSDTYNLILNLYVSWDYEKGVQLV 446
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
WDEM+ G P ++ +++ L DKLD+A Y++ M G+ P
Sbjct: 447 WDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGMTP 492
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 132/276 (47%), Gaps = 7/276 (2%)
Query: 46 KSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS--YGIMINAHCSAKRYDEAVELF 103
++YT +L+ G+ K + M +++ E+ + + V + + +++N + A + EA+++F
Sbjct: 147 RAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMF 206
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
+ + + F L+ L K + EA F Q KK F P ++N ++ +C
Sbjct: 207 YKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVK 265
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ DA R+ +E+ + P+ TY ++ L K+G+ A +F M K G P V+
Sbjct: 266 GSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEK-GINPDVAI 324
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++ C+ ++ A+ I+ EM RG + Y+TLI C ++++ + +M
Sbjct: 325 CNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDME 384
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
G+ P +S + L+ + + L Q+++K
Sbjct: 385 VKGVSPNNMTYSYI---LKTTEKPKDVISLMQRMEK 417
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + ++ +N LI CK +E+ E+ D M+ + P+ +Y+ +L+ + K+
Sbjct: 348 MNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKD 407
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL-FREMEATNCKPSPHIFC 119
++S+ + M+ G D +Y +++N + S Y++ V+L + EME P F
Sbjct: 408 VISL---MQRMEKSGCRLDSDTYNLILNLYVSWD-YEKGVQLVWDEMERNGSGPDQRSFT 463
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+++GL S +L EAL ++ + RG PE T
Sbjct: 464 IMVHGLHSHDKLDEALHYYRTMESRGMTPEPRT 496
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 154/305 (50%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K F LI+ C+ ++ RA E+ D+M+KR P SY ++ G K+
Sbjct: 394 MVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 453
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N++ +M G +P+VV Y I+I A+ S R +EA L M + P +
Sbjct: 454 LSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 513
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ EA + + + RG +P+A T+ A + Y + ++ +A + DEM G
Sbjct: 514 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 573
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++++ KAG EA S+F+R+ G P V T + N +V A
Sbjct: 574 LMPNNPLYTVLINGHFKAGNLMEALSIFRRL-HALGVLPDVQTCSAFIHGLLKNGRVQEA 632
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++ E+K +G++P + YS+LI+ C + +++ A + EM GI P +++ L
Sbjct: 633 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 692
Query: 301 LRDEG 305
L G
Sbjct: 693 LCKSG 697
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 170/326 (52%), Gaps = 5/326 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
D+ LK P+ +N L+D LCKS ++RA+++FD M ++ +PD +Y+ +++G+ +
Sbjct: 672 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 731
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+N+ ++ EM G +P Y +++ C ++A+ LFREM + F
Sbjct: 732 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-F 790
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
TLI+G ++ EA Q F + + P+ TY V+ +C + ++ +A + EM++
Sbjct: 791 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 850
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ +T TY +++ K G++ E +++F++M K G +P TY +V+ C +
Sbjct: 851 RNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK-GVKPDEVTYGLVIYAHCKEDNLV 909
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++ DE+ +G+L ++ LI +LC + L +A K EM ++G++P + L
Sbjct: 910 EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLV 969
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP 324
++ + G + A + + + L P
Sbjct: 970 RSFHEAGKMDEATRVFEGVKSLGLVP 995
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 140/282 (49%), Gaps = 1/282 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N +I L K+ +E A +++ R PD ++ + G+ + +
Sbjct: 503 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 562
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + EM D G P+ Y ++IN H A EA+ +FR + A P I+G
Sbjct: 563 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHG 622
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ EAL+ F + K++G P+ TY++++ +C + A+ + DEM GI PN
Sbjct: 623 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 682
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ ++ L K+G + A +F M K G EP TY ++ +C + V A ++
Sbjct: 683 IFIYNALVDGLCKSGDIQRARKLFDGMPEK-GLEPDSVTYSTMIDGYCKSENVAEAFSLF 741
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
EM ++GV P +Y+ L++ C E ++ A F+EML G
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 145/297 (48%), Gaps = 1/297 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ L K +E +V++ M + D+ +YT L+ + +L V EM +
Sbjct: 197 NSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDE 256
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G P+ Y ++I C DEAVEL R M P+ + + + GL KR++E
Sbjct: 257 KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNE 316
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A F + +K G +P+ +A++ + I++ R+ D M CGI N TY++++H
Sbjct: 317 AKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIH 376
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K G+ E+A + K M G +P T+ +++ +C + A+ + DEM+ R ++
Sbjct: 377 GLCKFGKMEKAAEILKGMV-TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 435
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P Y +IN LCH L A K ++M G++P ++S L A EG E A
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEA 492
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 152/324 (46%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LC+++ + A+ F++M+K PD + + L++G+ ++ +
Sbjct: 289 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 348
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + M G ++++Y ++I+ C + ++A E+ + M CKP+ FC
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCL 408
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G E + AL+ + +KR P A +Y A++ C ++ A +++++M G
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y I++ GR EEA + MS G P + Y ++ +++ A
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCS-GVAPDIFCYNAIISCLSKAGKMEEA 527
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
E++ RG+ P + I K+ +A KYF EMLD G+ P L++ L
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
G A+ + +++ L P
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLP 611
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 144/291 (49%), Gaps = 11/291 (3%)
Query: 2 DKFGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ F L E+P +N L+ CK +E+A +F +M ++ F + S+ L+
Sbjct: 736 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLI 794
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+G+ + + +++++EM PD V+Y +I+ HC A + +EA LF+EM+ N
Sbjct: 795 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 854
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ +L+ G + SE F + +G +P+ TY V+ A+C + +A+++
Sbjct: 855 VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 914
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
DE+ G+ +D+++ L K EA + M + G +P+++ +VR F
Sbjct: 915 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG-ELGLKPSLAACNTLVRSFH 973
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++D A R+++ +K+ G++P L+N ++ +DA ++++
Sbjct: 974 EAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ + L+ L L A + + ++G P Y+ V+ C I++A +
Sbjct: 229 YTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRS 288
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M + G+ PNT TY I+ L +A R EA F+ M +K G +P + ++ F
Sbjct: 289 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREG 347
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+D +RI D M + G+ + Y+ LI+ LC K++ A + + M+ +G +P + F
Sbjct: 348 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFC 407
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L + E A+ L +++K P
Sbjct: 408 LLIEGYCREHNMGRALELLDEMEKRNLVP 436
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 144/297 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ FN ++D LCK + + A VF + +R P++ +Y+ L++G +
Sbjct: 199 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 258
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M + G + V+Y +++ R ++AV + R+M C P + T
Sbjct: 259 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 318
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +RL EA+ + + GF P TY + C S R ++A ++D M G
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ L KAGR EA F++M+R P V Y ++ C ++D A
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEA 438
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ M G +P + +S LIN LC ++D + F+ M + G P ++ L
Sbjct: 439 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATL 495
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 154/306 (50%), Gaps = 3/306 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+ID LCKSR V++A +F +M + PD+ +Y L++G G+Q+ + +++ E + G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCKPSPHIFCTLINGLGSEKRLSEA 134
P VV+Y MI+ C R + A+ L+ +M +P+ + TLI+GL + + +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ + RG P A TYN +V A R +A+ ++++M G P T+ +++
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 195 LIKAGRTEEAYSVFKRMSR-KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K G E A+ V M + G P V T+ V+ C ++ A ++ RG
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVV 312
P + YSTLI+ L K+D+A + +M+++G R +S + L G ME+ VV
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300
Query: 313 LAQKID 318
L Q D
Sbjct: 301 LRQMRD 306
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 151/307 (49%), Gaps = 9/307 (2%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTIL---LEGWGQQKN 60
FG + + ++ LID LC+ V++ ++ ++M R P+ +Y L L G G+ K
Sbjct: 95 FGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKE 154
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--F 118
S+ E +M +G P+++++G++I C + A + EM SP + F
Sbjct: 155 AFSLLE---QMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITF 211
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++++GL E+R+ +A F ++ +RG P TY+ ++ ++++A +++ +M +
Sbjct: 212 NSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 271
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G NT TY V+ L+K GR E+A V ++M R G P TY ++ F ++
Sbjct: 272 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQM-RDAGCLPDAVTYNTLIDGFFKRQRLR 330
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A+ + EM G P + Y+TL + LC + D+A + M G P +S++
Sbjct: 331 EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 390
Query: 299 QALRDEG 305
L G
Sbjct: 391 DGLCKAG 397
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 4/310 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLS 63
G + +N +ID LCK +E A ++D M F P + +Y+ L++G + +
Sbjct: 60 GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDK 119
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM G P+ V+Y ++NA R EA L +M A C P F +I
Sbjct: 120 GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179
Query: 124 GLGSEKRLSEALQFFGQ--SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
GL E + A + + + G P+ T+N+V+ C RI DA+ + + G
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY ++ L K + +EA + +M + G TY VV +++ A+
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMV-ELGCRANTVTYSTVVDGLLKVGRMEDAV 298
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ +M+ G LP Y+TLI+ +L +A +EML+ G P ++ L L
Sbjct: 299 VVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGL 358
Query: 302 RDEGMEETAV 311
G + AV
Sbjct: 359 CRSGRFDEAV 368
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 1/205 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + L LC+S + A E+ D M R P+ +Y+ +++G +
Sbjct: 339 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 398
Query: 61 LLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + +M +D+ P V++Y +I+ C A + DEA E M P F
Sbjct: 399 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFS 458
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGL R+ L+ F +RG P+ TY +V C + R+++A+ + +MR
Sbjct: 459 ILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSD 518
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEA 204
G+ P+ T ++H L++ R E+A
Sbjct: 519 GLSPDRSTRRTMIHGLLEVNRDEDA 543
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRF-DPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
++ ++D LCK+ V A F+KM + P + +Y+ L++G + + E M
Sbjct: 386 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERM 445
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G PDVV++ I+IN C A R D +ELFR M C P + TL++ L R+
Sbjct: 446 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRV 505
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
EA F Q + G P+ T ++ R DA R+ DE
Sbjct: 506 DEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 160/319 (50%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ L N L++ C+ + A KM K +PDI ++ LL G+ +
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDR 166
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M + G+EP+VV Y +I+ C +K+ D A++L ME +P + +
Sbjct: 167 IYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + R +A + KR P+ T+NA++ A RI++A + +EM +
Sbjct: 227 LISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRS 286
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++++ L R +EA +F M K G P V TY I++ +C + +V+
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSK-GCFPDVVTYSILINGYCKSKKVEHG 345
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+++ EM RGV+ Y+ LI C KL+ A + F+ M+ G+ P ++ L
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHG 405
Query: 301 LRDEGMEETAVVLAQKIDK 319
L D G E A+V+ + K
Sbjct: 406 LCDNGKIEKALVILADMQK 424
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 144/289 (49%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + +N LI LC S + A + M KR PD+ ++ L++ ++
Sbjct: 212 MEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+Y EM +PD+V+Y ++I C R DEA ++F M + C P +
Sbjct: 272 ISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSI 331
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING K++ ++ F + +RG TY ++ YC + ++N A + M CG
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCG 391
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+++LH L G+ E+A + M +K G + + TY I++R C +V A
Sbjct: 392 VPPNIITYNVLLHGLCDNGKIEKALVILADM-QKSGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ + +G+ P + Y+ ++ L + +A F++M + GI P
Sbjct: 451 WDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILP 499
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 150/317 (47%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +N +ID LCKS+ V+ A ++ ++M+ PD +Y L+ G
Sbjct: 177 MVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGR 236
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M PDV ++ +I+A R EA EL+ EM + P +
Sbjct: 237 WDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSL 296
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL RL EA Q FG +G P+ TY+ ++ YC S ++ ++ EM + G
Sbjct: 297 LIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ NT TY +++ +AG+ A +FK M G P + TY +++ C N +++ A
Sbjct: 357 VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVF-CGVPPNIITYNVLLHGLCDNGKIEKA 415
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I +M+ G+ + Y+ +I +C ++ DA + + G+ P ++ +
Sbjct: 416 LVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLG 475
Query: 301 LRDEGMEETAVVLAQKI 317
L +G+ A L +K+
Sbjct: 476 LYKKGLRGEADALFRKM 492
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 147/287 (51%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + ++ F L++ C+ + A +FD+M + ++P++ Y +++G + K
Sbjct: 142 MMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQ 201
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ M+ DG PD V+Y +I+ C++ R+D+A + M P F
Sbjct: 202 VDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNA 261
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ E R+SEA + + + +R +P+ TY+ ++ C R+++A +M M G
Sbjct: 262 LIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKG 321
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY I+++ K+ + E +F MS++ TV TY ++++ +C ++++A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV-TYTVLIQGYCRAGKLNVA 380
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
I+ M GV P + Y+ L++ LC K++ A +M G+
Sbjct: 381 EEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGM 427
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 136/286 (47%), Gaps = 1/286 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
D+ ++ + ++ + ++F M + R P I ++ LL + K + ++ +M
Sbjct: 48 DYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM 107
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G ++ + I++N C + A+ +M +P F +L+NG R+
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRI 167
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+AL F + + G+EP YN ++ C S ++++A +++ M GI P+ TY+ +
Sbjct: 168 YDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSL 227
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L +GR ++A + M+++ P V T+ ++ ++ A +++EM R
Sbjct: 228 ISGLCNSGRWDDATRMVSCMTKRE-IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRS 286
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ P + YS LI LC +LD+A + F M+ G P +S L
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSIL 332
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ ++ +N +I +CK+ V A +++ + + PDI +YT ++ G ++
Sbjct: 422 MQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGL 481
Query: 61 LLSMNEVYREMKDDGFEPD 79
+ ++R+MK+DG P+
Sbjct: 482 RGEADALFRKMKEDGILPN 500
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 152/296 (51%), Gaps = 1/296 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN +I +CK V++A E+ ++M + PD ++ IL+ G + K + EV R +
Sbjct: 236 SFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRL 295
Query: 72 KDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ DG P+VV+Y +I+ +C A R ++A+ ++ +M A P+ + LING G
Sbjct: 296 QRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGN 355
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ A+ + Q R P+ T+++++ YC +++DA ++ EM + I PN T+ I
Sbjct: 356 MGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCI 415
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++H K R+ EA K+M+ + P Y V+ + C +VD A I EM+ +
Sbjct: 416 IIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEK 475
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
G P + Y+ LI C + ++ +A +F +M++ G P + ++ L GM
Sbjct: 476 GCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGM 531
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 132/268 (49%), Gaps = 3/268 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQK 59
MD+FG + N L++ LC+++ V + +EV ++++ P++ +YT ++ G+ +
Sbjct: 260 MDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAG 319
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ VY +M G P+VV+Y ++IN + A AV ++++M C P F
Sbjct: 320 RMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFS 379
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-K 178
+LI+G +L +A++ + + + +P A T+ ++ +C R +A + +M +
Sbjct: 380 SLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMR 439
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P Y+ V+ L K G+ +EA + M K G P TY I++ C ++
Sbjct: 440 TDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEK-GCRPDKYTYTILIIGHCMKGRIA 498
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSL 266
A+ + +M G P + ++ I+ L
Sbjct: 499 EAVTFFHKMVETGCSPDSIVVNSFISCL 526
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I CK+ +E A V++ M P++ +Y +L+ G+G+ N+ S VY++M
Sbjct: 308 YTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMI 367
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDVV++ +I+ +C + D+A++++ EM + +P+ H FC +I+ + R
Sbjct: 368 LRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSG 427
Query: 133 EALQFFGQSKKR------------------------------------GFEPEAPTYNAV 156
EAL F + R G P+ TY +
Sbjct: 428 EALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTIL 487
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+ +C RI +A +M + G P++ + + L+K+G E + +
Sbjct: 488 IIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDHIMR 540
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 124/301 (41%), Gaps = 13/301 (4%)
Query: 10 LPDFNRLIDTL-----------CKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
LP F RL + C S + + + P SY ++ Q
Sbjct: 81 LPAFRRLAPSQAAAAAALRHAPCASSTLHLFSALHSPHSQLAMPPSAHSYRYVISLMCQS 140
Query: 59 KNLLSMNEVYREMKD-DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+++ +M D G+ P+ + + +A D A L + C +
Sbjct: 141 GRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAALLSKASQFGCSIEAYA 200
Query: 118 FCTLINGLGSEKRLSEALQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ L++ R+ +A+ F G + + P+ ++N V+ C + A +++ M
Sbjct: 201 YNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERM 260
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G P+T T++I+++ L +A + V +R+ R P V TY V+ +C +
Sbjct: 261 DEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGR 320
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
++ AM ++++M A G P + Y+ LIN + A +Q+M+ P FS+
Sbjct: 321 MEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSS 380
Query: 297 L 297
L
Sbjct: 381 L 381
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK L +N +I+ LCK RA+ VF++M PD +Y LL + N
Sbjct: 246 MSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNN 305
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ +M G PD++S+ +I D+A+ FR+M+ + P I+
Sbjct: 306 FLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTI 365
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING +SEAL+ + ++G + YN ++ C + DA + DEM + G
Sbjct: 366 LINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERG 425
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ ++H K G +A S+F M++K +P + TY I++ FC +++ A
Sbjct: 426 VVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQK-NIKPDIVTYNILIDGFCKTTEMEKA 484
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+W+EM +R + P Y+ L+N C+ + +A + + EM+ GI+P
Sbjct: 485 NELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKP 533
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 151/285 (52%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +++ LCK + + A +FD+M +R PD ++T L+ G ++ N+
Sbjct: 390 GCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKA 449
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M +PD+V+Y I+I+ C ++A EL+ EM + P+ + L+NG
Sbjct: 450 LSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNG 509
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +SEA + + + ++G +P T N V+ YC S ++ A + +M G+GP+
Sbjct: 510 YCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPD 569
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY+ +++ +K ++A+ + +M K G +P V TY +++ FC ++ A I
Sbjct: 570 SITYNTLINGFVKGEYMDKAFFLINKMETK-GLQPDVVTYNVILNGFCRQGRMQEAELIL 628
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M RG+ P Y+TLIN +D L +A ++ EML G P
Sbjct: 629 RKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 153/316 (48%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L F+ LI ++ H+++A F MK PD YTIL+ G+ + +
Sbjct: 320 GVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEA 379
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ +M + G DVV+Y ++N C K +A LF EM P F TLI+G
Sbjct: 380 LEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHG 439
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + +AL FG ++ +P+ TYN ++ +C + + A + +EM I PN
Sbjct: 440 HCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPN 499
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+++ G EA+ ++ M RK G +PT+ T V++ +C + + A
Sbjct: 500 HISYAILVNGYCNLGFVSEAFRLWDEMIRK-GIKPTLVTCNTVIKGYCRSGDLSKADEFL 558
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M + GV P Y+TLIN + +D A +M G++P ++ + +
Sbjct: 559 GKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQ 618
Query: 305 G-MEETAVVLAQKIDK 319
G M+E ++L + I++
Sbjct: 619 GRMQEAELILRKMIER 634
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 149/319 (46%), Gaps = 3/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + +N L+ C++ + A+++F M R PD+ S++ L+ + +
Sbjct: 281 MLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGH 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +R+MK G PD V Y I+IN +C EA+E+ +M C + T
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNT 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL +K L++A F + +RG P+ T+ ++ +C + A + M +
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I P+ TY+I++ K E+A ++ M SRK P +Y I+V +C V
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK--IFPNHISYAILVNGYCNLGFVSE 518
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A R+WDEM +G+ P + +T+I C L A ++ +M+ G+ P ++ L
Sbjct: 519 AFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLIN 578
Query: 300 ALRDEGMEETAVVLAQKID 318
+ A L K++
Sbjct: 579 GFVKGEYMDKAFFLINKME 597
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 138/300 (46%), Gaps = 1/300 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ L K V+ A EV++++ + + ++ + I++ + + + +M+
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQ 213
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G D+V+Y +INA+C EA E+ M KP+ + +INGL + R
Sbjct: 214 KGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVR 273
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A F + G P+ TYN ++ C + +A + +M G+ P+ ++ ++
Sbjct: 274 AKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIG 333
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
+ G ++A F+ M + G P Y I++ +C N + A+ I D+M +G
Sbjct: 334 VSSRNGHLDQALMYFRDM-KTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCA 392
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ Y+T++N LC + L DA F EM++ G+ P F+ L EG A+ L
Sbjct: 393 LDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSL 452
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 36/305 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LI + ++R + + F ++++ F I + LL G + + EVY E+
Sbjct: 118 FDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIA 177
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G E +V + IM+NA C + D+ +ME
Sbjct: 178 RSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDME------------------------- 212
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
++G + TYN ++ AYC + +A+ +M+ M G+ P TY+ V+
Sbjct: 213 ----------QKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVI 262
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K GR A VF M G P +TY ++ C N A I+ +M RGV
Sbjct: 263 NGLCKKGRYVRAKGVFNEM-LSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGV 321
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + +S+LI LD A YF++M G+ P +++ L GM A+
Sbjct: 322 SPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALE 381
Query: 313 LAQKI 317
+ K+
Sbjct: 382 IRDKM 386
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 112/217 (51%), Gaps = 6/217 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + +K ++ +N LID CK+ +E+A E++++M R+ P+ SY IL+ G+ N
Sbjct: 456 MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYC---N 512
Query: 61 LLSMNEVYR---EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
L ++E +R EM G +P +V+ +I +C + +A E +M + P
Sbjct: 513 LGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSIT 572
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TLING + + +A + + +G +P+ TYN ++ +C R+ +A ++ +M
Sbjct: 573 YNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMI 632
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+ GI P+ TY +++ + +EA+ M ++
Sbjct: 633 ERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQR 669
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 105/219 (47%), Gaps = 1/219 (0%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
D + + ++I ++ A++ +E + F+ + S + +L+ GL + A + +
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+ + G E T N +V A C +I+D + +M + GI + TY+ +++ +
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
G EA+ V MS K G +PT+ TY V+ C + A +++EM + G+ P
Sbjct: 234 GLLGEAFEVMNSMSGK-GLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTT 292
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
Y+TL+ C + +A F +ML G+ P FS+L
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSL 331
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K L N +I C+S + +A E KM PD +Y L+ G+ + +
Sbjct: 526 MIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEY 585
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M+ G +PDVV+Y +++N C R EA + R+M P + T
Sbjct: 586 MDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTT 645
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPE 149
LING S+ L EA +F + +RGF P+
Sbjct: 646 LINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
CG+ + +D+++ ++A + E FK + RK G +++ ++ VD
Sbjct: 111 CGV--DNLVFDLLIRSYVQARKLNEGTDTFKILRRK-GFLVSINACNSLLGGLVKMGWVD 167
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
+A +++E+ G+ ++ + ++N+LC + K+DD + +M GI ++ L
Sbjct: 168 LAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLI 227
Query: 299 QALRDEGM 306
A EG+
Sbjct: 228 NAYCREGL 235
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 155/304 (50%), Gaps = 9/304 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
L+D+LCK HV A+E FD K+ + P ++ Y I+L GW + + L ++ EMK
Sbjct: 199 LLDSLCKEGHVRVAKEYFDSRKQLDSCWIPHVRIYNIMLNGWFRSRKLKHAERLWLEMKK 258
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+ P VV+YG ++ +C +R + A+EL M +P+ ++ +I+ L E R E
Sbjct: 259 NNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGRFKE 318
Query: 134 A---LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+++F QS+ P TYN++V YC + A +++ M G P TY+
Sbjct: 319 VSGMMEYFLQSES---GPTISTYNSLVKGYCKAKDPVGASKVLKMMISRGFVPTPTTYNY 375
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
H K G EE +++ +M + G P T+ ++++M C ++D+A++I EM++R
Sbjct: 376 FFRHFSKFGMIEEGMNLYTKMI-ESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEMRSR 434
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G + + LI+ C + ++A F++M+ GI P F L LR GM E A
Sbjct: 435 GCDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQKGIVPQYLTFQRLNDELRKRGMVERA 494
Query: 311 VVLA 314
L+
Sbjct: 495 RKLS 498
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 120/275 (43%), Gaps = 17/275 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K + + + L++ C+ R VERA E+ D M+K +P+ Y +++ ++
Sbjct: 256 MKKNNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEGR 315
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ + P + +Y ++ +C AK A ++ + M + P+P +
Sbjct: 316 FKEVSGMMEYFLQSESGPTISTYNSLVKGYCKAKDPVGASKVLKMMISRGFVPTPTTYNY 375
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ E + + + + G+ P+ T++ ++ C R++ A ++ EMR G
Sbjct: 376 FFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCEEERLDLAVQISKEMRSRG 435
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ T +++H + R EEA+ F+ M +K G P T++
Sbjct: 436 CDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQK-GIVPQYLTFQ--------------- 479
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
R+ DE++ RG++ S +++S+ H L +
Sbjct: 480 -RLNDELRKRGMVERARKLSDMMSSVPHSTNLPNT 513
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 98/226 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ +N +ID L + + + + + P I +Y L++G+ + K+
Sbjct: 291 MRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTISTYNSLVKGYCKAKD 350
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++V + M GF P +Y +E + L+ +M + P F
Sbjct: 351 PVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTFHL 410
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L E+RL A+Q + + RG + + T ++ +C R +A+ ++M + G
Sbjct: 411 LLKMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQKG 470
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
I P T+ + L K G E A + MS P + +TY +
Sbjct: 471 IVPQYLTFQRLNDELRKRGMVERARKLSDMMSSVPHSTNLPNTYSV 516
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 150/277 (54%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI TLCK VE A E+ + + PD+ ++ L++G N E++ EMK
Sbjct: 389 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK 448
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD +Y ++I++ CS R +EA+ L +EME++ C + + TLI+G KR+
Sbjct: 449 TKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIE 508
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + + +G TYN ++ C + R+ +A ++MD+M G+ P+ TY+ +L
Sbjct: 509 EAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLL 568
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ +AG ++A + + M+ G EP TY ++ +V++A R+ ++ +G+
Sbjct: 569 TYFCRAGDIKKAADIVQTMTSN-GCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGM 627
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+ +I +L E + +A + F+EM++ G P
Sbjct: 628 VLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPP 664
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 145/317 (45%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + FN L++ LC+ HV+ A E+ D M + FDPDI +Y L+ G +
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M F P+ V+Y +I+ C + +EA EL R + + P F +
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL A++ F + K +G P+ TYN ++ + C R+ +A ++ EM G
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N TY+ ++ K R EEA +F M + G V TY ++ C N +V+ A
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQ-GISRNVVTYNTLIDGLCKNRRVEEA 545
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ D+M G+ P Y++L+ C + A Q M G P + L
Sbjct: 546 AQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILG 605
Query: 301 LRDEGMEETAVVLAQKI 317
L G E A L + +
Sbjct: 606 LSKAGRVELASRLLRTV 622
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 143/282 (50%), Gaps = 1/282 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ FN LI LC++ + A + ++M PD K++T L++G+ ++ N+
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M G V+ ++++ +C R +E + EM +P F +L+NG
Sbjct: 266 LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG 325
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + AL+ + GF+P+ TYN+++ C + +A ++++M PN
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+ ++ L K + EEA + + ++ K G P V T+ +++ C +AM ++
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSK-GILPDVCTFNSLIQGLCLTNNHRLAMELF 444
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+EMK +G P Y+ LI+SLC +L++A +EM G
Sbjct: 445 EEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 145/313 (46%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N LI LCK VE A E+ ++M R F P+ +Y L+ ++ +
Sbjct: 346 GFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEA 405
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ R + G PDV ++ +I C + A+ELF EM+ C P + LI+
Sbjct: 406 TELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDS 465
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L S RL EAL + + G TYN ++ +C + RI +A + DEM GI N
Sbjct: 466 LCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRN 525
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L K R EEA + +M + G +P TY ++ FC + A I
Sbjct: 526 VVTYNTLIDGLCKNRRVEEAAQLMDQMLME-GLKPDKFTYNSLLTYFCRAGDIKKAADIV 584
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M + G P Y TLI L +++ A + + + G+ Q ++ + +AL E
Sbjct: 585 QTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFRE 644
Query: 305 GMEETAVVLAQKI 317
AV L +++
Sbjct: 645 KRTSEAVRLFREM 657
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 147/318 (46%), Gaps = 1/318 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
++FGLK + +N L++ L ++ + V +M R PD+ ++ IL++ + +
Sbjct: 168 EEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQI 227
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ EM G PD ++ ++ + A+ + +M A C S L
Sbjct: 228 RPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVL 287
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++G E R+ E L F + GF P+ T+N++V C + A ++D M + G
Sbjct: 288 VHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGF 347
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY+ ++ L K G EEA + +M + + P TY ++ C QV+ A
Sbjct: 348 DPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFS-PNTVTYNTLISTLCKENQVEEAT 406
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ + ++G+LP + +++LI LC + A + F+EM G P ++ L +L
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466
Query: 302 RDEGMEETAVVLAQKIDK 319
G E A+ L ++++
Sbjct: 467 CSRGRLEEALSLLKEMES 484
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 2/244 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + + +N LID CK++ +E A+E+FD+M+ + ++ +Y L++G + +
Sbjct: 482 MESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRR 541
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +G +PD +Y ++ C A +A ++ + M + C+P + T
Sbjct: 542 VEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGT 601
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL R+ A + + +G TYN V+ A R ++A R+ EM + G
Sbjct: 602 LILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKG 661
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P+ TY +V L G EA M+ K G P S++ ++ C + D
Sbjct: 662 DPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDK-GFLPDFSSFLMLAEGLCALSMEDT 720
Query: 240 AMRI 243
+++
Sbjct: 721 LIKL 724
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 7/285 (2%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
K+ F P Y +L G+ + SM V +EMK G E ++ I+I ++ + +
Sbjct: 97 KQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELF 156
Query: 97 DEAVELFREMEAT-NCKPSPHIFCTLINGL--GSEKRLSEALQFFGQSKKRGFEPEAPTY 153
DEAV + ME K + L+N L G++ +L E + + RG +P+ T+
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVN--SRMVSRGIKPDVTTF 214
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
N ++ A C + +I A MM+EM G+ P+ +T+ ++ I+ G A + ++M
Sbjct: 215 NILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMV- 273
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
G + T ++V +C +++ + DEM G P +++L+N LC +
Sbjct: 274 AAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVK 333
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKI 317
A + ML G P +++L L G +EE +L Q I
Sbjct: 334 HALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%)
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
SK+ F P + Y V+ R++ EM+ G T+ I++ K
Sbjct: 96 SKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFEL 155
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
+EA +V M + G + TY ++ + ++ + + M +RG+ P + ++
Sbjct: 156 FDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFN 215
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LI +LC ++ A +EM G+ P + F+ L Q +EG
Sbjct: 216 ILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEG 260
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 151/315 (47%), Gaps = 11/315 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID LCK ++ A VFD M + P++ +Y L+ G + + + + M
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI-----FCTLINGLGS 127
D G PDV++Y ++++A C A R DEA+EL M + C P+ + F LI G
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+A F + + +P+ T+ A++ C + ++ A ++D M G+ PN T
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y+ ++H L K+GR EEA + M G P TY +V C ++ D A+++ E+
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMV-SSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 422
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-- 305
K+ G P Y+ L++ L K + A +EM+ G +P F+ L G
Sbjct: 423 KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNL 482
Query: 306 ---MEETAVVLAQKI 317
ME VVLA+ +
Sbjct: 483 AGTMELLRVVLAKGM 497
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 162/320 (50%), Gaps = 12/320 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N +I+ LCKS + E+F+++ +R PD+ +Y L++ + +
Sbjct: 28 MARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 87
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--F 118
L ++ +M G P+VV+Y ++IN C R DEA EL +EM +C P+I +
Sbjct: 88 LEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 147
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRG---FEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ ++GL + +EA + +S + G P+ T++ ++ C +I++A + D+
Sbjct: 148 NSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 206
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M G PN TY+ +++ L KA + E A+++ + M K G P V TY ++V FC +
Sbjct: 207 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK-GVTPDVITYSVLVDAFCKAS 265
Query: 236 QVDMAMRIWDEMKARGVLPVMHM-----YSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+VD A+ + M +RG P + + ++ LI C + A F+EM+ ++P
Sbjct: 266 RVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 325
Query: 291 GQLFSNLKQALRDEGMEETA 310
F L L G E A
Sbjct: 326 VMTFGALIDGLCKAGQVEAA 345
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 161/333 (48%), Gaps = 10/333 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQ 58
M G + ++ LI+ LCK ++ A+E+ +M ++ D P+I +Y L+G +Q
Sbjct: 98 MSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 157
Query: 59 KNLLSMNEVYREMKDDGF--EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
E+ R ++D PD V++ +I+ C + DEA +F +M A P+
Sbjct: 158 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 217
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ L+NGL ++ A +G P+ TY+ +V A+C + R+++A ++ M
Sbjct: 218 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 277
Query: 177 RKCGIGPNTR-----TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
G PN T++I++ KAG E+A ++F+ M K +P V T+ ++
Sbjct: 278 ASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK-NLQPDVMTFGALIDGL 336
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C QV+ A I D M GV P + Y+ L++ LC ++++AC++ +EM+ G P
Sbjct: 337 CKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 396
Query: 292 QLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ +L AL + A+ L ++ P
Sbjct: 397 ITYGSLVYALCRASRTDDALQLVSELKSFGWDP 429
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 142/285 (49%), Gaps = 6/285 (2%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVF-DKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ D+N ++ +LC++ RA E+F +M + P I +Y ++ G + +L + E++
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
E+ + G PDVV+Y +I++ C A +EA L +M + C P+ + LINGL
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 129 KRLSEALQFFGQSKKRGFE--PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--IGPN 184
R+ EA + + ++ + P TYN+ + C +A +M +R + P+
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T T+ ++ L K G+ +EA SVF M G P V TY +V C +++ A +
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMI-AGGYVPNVITYNALVNGLCKADKMERAHAMI 239
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ M +GV P + YS L+++ C ++D+A + M G P
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 284
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 144/282 (51%), Gaps = 6/282 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI-----KSYTILLEGWGQQK 59
G+ ++ ++ L+D CK+ V+ A E+ M R P++ ++ IL+ G +
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAG 305
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
N + ++ EM +PDV+++G +I+ C A + + A ++ M P+ +
Sbjct: 306 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 365
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L++GL R+ EA QF + G P++ TY ++V A C + R +DA +++ E++
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 425
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+T TY+I++ L K+G+TE+A +V + M K G +P T+ + +
Sbjct: 426 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK-GHQPDSFTFAACFSGLHRSGNLAG 484
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
M + + A+G+LP S++++ +C KLDD +E
Sbjct: 485 TMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 140/290 (48%), Gaps = 6/290 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L++ LCK+ +ERA + + M + PD+ +Y++L++ + + + E+ M
Sbjct: 219 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 278
Query: 73 DDGFEPDV-----VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
G P+V V++ I+I C A +++A LF EM A N +P F LI+GL
Sbjct: 279 SRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 338
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
++ A G P TYNA+V C S RI +A + ++EM G P++ T
Sbjct: 339 AGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 398
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y +++ L +A RT++A + + + G +P TY I+V + + + A+ + +EM
Sbjct: 399 YGSLVYALCRASRTDDALQLVSEL-KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 457
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+G P ++ + L L + + +L G+ P S++
Sbjct: 458 VGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSI 507
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 8/263 (3%)
Query: 45 IKSYTILLEGWGQQKNLLSMNEVYR-EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
+ Y I+L+ + + E++R EM DG P +V+Y +IN C + +ELF
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
E+ P + TLI+ L L EA + G RG P TY+ ++ C
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 164 MRINDAYRMMDEM--RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT---E 218
RI++A ++ EM + C + PN TY+ L L K T EA + + S + G+
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR--SLRDGSLRVS 178
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P T+ ++ C Q+D A ++D+M A G +P + Y+ L+N LC DK++ A
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238
Query: 279 FQEMLDIGIRPPGQLFSNLKQAL 301
+ M+D G+ P +S L A
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAF 261
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ FG + +N L+D L KS E+A V ++M + PD ++ G + N
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
L E+ R + G PD + +++ C + + D+ + +E E
Sbjct: 482 LAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 150/298 (50%), Gaps = 10/298 (3%)
Query: 1 MDKFGLKQEL------PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTIL 51
M+ FGL E+ P+ +N LIDTLCK V+ ++ + M K+ PD+ Y+IL
Sbjct: 202 MEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSIL 261
Query: 52 LEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC 111
++G+ + +++ M G PDV SY I+IN C KR DEA+ L REM N
Sbjct: 262 MDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNM 321
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
P + +LI+GL R++ L + RG TYN+++ C + ++ A
Sbjct: 322 IPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIA 381
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ +M++ GI PN TY ++ L K GR ++ ++F+ + K G V TY +++
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVK-GYCIDVWTYTVMISGL 440
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C D A+ + +M+ G +P + +I SL +D+ D A K EM+ G+ P
Sbjct: 441 CKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + L++ LCK A ++ ++ R PD+ Y+ +++G + K +
Sbjct: 110 GFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEA 169
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y EM G PDV++Y +I C A + EA L EM N P+ + + TLI+
Sbjct: 170 YDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDT 229
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ E+ K+G +P+ Y+ ++ YC + A ++ M + G+ P+
Sbjct: 230 LCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPD 289
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+I+++ L K R +EA ++ + M K TV TY ++ C ++ + +
Sbjct: 290 VYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV-TYSSLIDGLCKLGRITTILDLT 348
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM RG + Y++L++ LC LD A F +M + GI+P ++ L L
Sbjct: 349 KEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 408
Query: 305 G 305
G
Sbjct: 409 G 409
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 147/311 (47%), Gaps = 4/311 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD ++ +ID LCK + V+ A +++ +M R PD+ +YT L+ G+ L+ +
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGL 207
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
EM P++ +Y +I+ C + E+ L M KP I+ L++G
Sbjct: 208 LNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCL 267
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+ +A Q F + G P+ +YN ++ C R+++A ++ EM + P+T T
Sbjct: 268 VGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVT 327
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ L K GR + K M + G + TY ++ C N +D A+ ++ +M
Sbjct: 328 YSSLIDGLCKLGRITTILDLTKEMHHR-GQPANLVTYNSLLDGLCKNQNLDKAIALFMKM 386
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
K RG+ P + Y+ LI+ LC +L FQ +L G ++ + L EGM
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMF 446
Query: 308 ETAVVLAQKID 318
+ A+ + K++
Sbjct: 447 DEALAMKSKME 457
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 1/280 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + N L+ LC V+++ DK+ + F D SY ILL G +
Sbjct: 73 KLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETR 132
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ R ++D PDVV Y +I+ C K DEA +L+ EM A P + TLI
Sbjct: 133 CAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLI 192
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
G +L EA + + P TYN ++ C ++ ++ ++ M K G+
Sbjct: 193 CGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVK 252
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ Y I++ G ++A +F M + G P V +Y I++ C +VD AM
Sbjct: 253 PDVVIYSILMDGYCLVGEVQKAKQIFLVMVQ-TGVNPDVYSYNIIINGLCKGKRVDEAMN 311
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ EM + ++P YS+LI+ LC ++ +EM
Sbjct: 312 LLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEM 351
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 123/258 (47%), Gaps = 1/258 (0%)
Query: 40 RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
R P I + +L + K+ ++ + ++M+ G PD+V+ I+IN C + +
Sbjct: 5 RHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFS 64
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ ++ +P+ I TL+ GL + + ++L F + +GF+ + +Y ++
Sbjct: 65 FSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNG 124
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
C A +++ + P+ Y ++ L K +EAY ++ M+ + G P
Sbjct: 125 LCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNAR-GIFP 183
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY ++ FC Q+ A + +EM + + P ++ Y+TLI++LC E K+ ++
Sbjct: 184 DVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLL 243
Query: 280 QEMLDIGIRPPGQLFSNL 297
M G++P ++S L
Sbjct: 244 AVMTKKGVKPDVVIYSIL 261
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 69/162 (42%), Gaps = 2/162 (1%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P + ++G+ + +M GI P+ T I+++ G+ ++SV
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
++ K G +P +++ C +V ++ D++ A+G Y L+N LC
Sbjct: 68 LGKI-LKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEE 308
+ A K + + D RP ++S + L +D+ ++E
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDE 168
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 148/291 (50%), Gaps = 1/291 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + FN LID LCK+ +E A + M +R PD +Y L++G+ + +
Sbjct: 303 GVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDA 362
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M+ G E D VSY ++IN +C + R EA +L+REM P+ + TL+ G
Sbjct: 363 RDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTG 422
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ +A FG+ K PE+ TYN ++ C + +++A + + P+
Sbjct: 423 LFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPS 482
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ ++ ++ L KA + E A +F R+S + G EP V TY +++ C + Q++ A ++
Sbjct: 483 IQIFNCLIDGLCKARKIEIARELFNRLSHE-GLEPNVITYTVMIHGLCKSGQLENAKDLF 541
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
M+ +G P + ++TL+ C D++ + QEM + P S
Sbjct: 542 LGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTIS 592
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 154/305 (50%), Gaps = 1/305 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K L + +ID+LCK +++ +E+F +MK R PD+ +Y+ ++ G
Sbjct: 234 IKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAK 293
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ EM D+G P+VV++ ++I+A C A + +EA L + M P + TLI+G
Sbjct: 294 GLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGF 353
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
E R+ +A F + +G E +A +YN ++ YC S R+ +A ++ EM I P
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ +L L + G+ +A+++F M T P TY I++ C N + AM ++
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLT-PESCTYNILLDGLCKNNHLSEAMELFH 472
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++ P + +++ LI+ LC K++ A + F + G+ P ++ + L G
Sbjct: 473 YLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSG 532
Query: 306 MEETA 310
E A
Sbjct: 533 QLENA 537
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 151/311 (48%), Gaps = 7/311 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + N LI+ C V+ V +M +R P+ ++T L++G
Sbjct: 118 MSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSR 177
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN------CKPS 114
+ + R+M G+ P+VV+YG ++N C AV+L EM N KP+
Sbjct: 178 ISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPN 237
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+CT+I+ L + + + + F + K RG P+ Y++++ C + R A + +
Sbjct: 238 LVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFN 297
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM G+ PN T+++++ L KAG+ EEA + K M ++ G P TY ++ FC
Sbjct: 298 EMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQR-GESPDTFTYNTLIDGFCLE 356
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
++D A ++ M+++G+ Y+ LIN C ++ +A K ++EM+ I P +
Sbjct: 357 GRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITY 416
Query: 295 SNLKQALRDEG 305
+ L L EG
Sbjct: 417 NTLLTGLFREG 427
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 139/306 (45%), Gaps = 12/306 (3%)
Query: 11 PDFNRLIDTL---CKSRHVERAQ--EVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
PD +L + L CKS H++R++ VF+ + + P I S+ LL + K +
Sbjct: 53 PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+Y+ M G PD ++ I+IN +C+ + D + + EM P+ F +L+ GL
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGL 172
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK------C 179
R+SEA + + G+ P TY ++ C + A ++ +EM
Sbjct: 173 CLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGV 232
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I PN Y ++ L K G ++ +F M + G P V Y ++ C+ + +
Sbjct: 233 TIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGR-GISPDVVAYSSIIHGMCHTGRWEG 291
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A +++EM GV P + ++ LI++LC K+++A + M+ G P ++ L
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID 351
Query: 300 ALRDEG 305
EG
Sbjct: 352 GFCLEG 357
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 1/251 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + +N LI+ CKS + A++++ +M + P + +Y LL G ++
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EMK P+ +Y I+++ C EA+ELF +E + +PS IF
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL +++ A + F + G EP TY ++ C S ++ +A + M + G
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T++ ++ + ++ + + M+ K + P ST IVV + + +
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFS-PDASTISIVVDLLSKDEKYREY 607
Query: 241 MRIWDEMKARG 251
+ + A+G
Sbjct: 608 LHLLPTFPAQG 618
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
++A+ + + + P +++ +L + K R + S++KRMS G P T I
Sbjct: 74 SEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLI-GLAPDFITLNI 132
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ +C +VD + + EM RG P +++L+ LC ++ +A ++M+ +G
Sbjct: 133 LINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMG 192
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQK----------------------IDKLRKTP 324
RP + L L G AV L ++ ID L K
Sbjct: 193 YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDG 252
Query: 325 LVDRGQ 330
L+D+G+
Sbjct: 253 LIDKGK 258
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 153/297 (51%), Gaps = 2/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LC A V D M +R PD+ +YTILLE ++ ++ EM+
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD+++Y +++N C R D+A+E + + + C+P+ + ++ GL + +R
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + ++G+ P T+N ++ C + A ++D++ K G PN+ +Y+ +L
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H K + + A + + M + G P + +Y ++ C +VD A+ + ++K +G
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSR-GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 397
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEE 308
PV+ Y+T+I+ L K +A + EM+ G++P +S + L R++ +EE
Sbjct: 398 TPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEE 454
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 155/301 (51%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + L++ CK ++A ++ D+M+ + PDI +Y +++ G Q+
Sbjct: 182 MLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGR 241
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E + + G EP+ VSY I++ C+A+R+++A +L EM P+ F
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + A++ Q K G P + +YN ++ A+C +++ A ++ M G
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+ +L L + G + A + ++ K G P + +Y V+ + A
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK-GCTPVLISYNTVIDGLTKAGKTKEA 420
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +EM +G+ P + YST+ + LC ED++++A + F ++ D+GIRP L++ +
Sbjct: 421 LELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLG 480
Query: 301 L 301
L
Sbjct: 481 L 481
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI LC+ VE A EV D++ K P+ SY +L + +QK
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G PD+VSY ++ A C D AVEL +++ C P + T
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + EAL+ + +G +P+ TY+ + C RI +A R +++ G
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PNT Y+ +L L K T A +F M G P STY I++ Y V A
Sbjct: 467 IRPNTVLYNAILLGLCKRRETHNAIDLFIYMISN-GCMPNESTYTILIEGLTYEGLVKEA 525
Query: 241 MRIWDEMKARGVL 253
+ E+ +RGV+
Sbjct: 526 RELLGELCSRGVV 538
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 150/310 (48%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N +++ +C+ V+ A E + +P+ SY I+L+G +
Sbjct: 217 MRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAER 276
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM G+ P+VV++ ++I+ C + A+E+ ++ C P+ +
Sbjct: 277 WEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNP 336
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ +K++ A+ F RG P+ +YN ++ A C ++ A ++ +++ G
Sbjct: 337 ILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P +Y+ V+ L KAG+T+EA + M K G +P + TY + C +++ A
Sbjct: 397 CTPVLISYNTVIDGLTKAGKTKEALELLNEMVTK-GLQPDIITYSTISSGLCREDRIEEA 455
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R + +++ G+ P +Y+ ++ LC + +A F M+ G P ++ L +
Sbjct: 456 IRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEG 515
Query: 301 LRDEGMEETA 310
L EG+ + A
Sbjct: 516 LTYEGLVKEA 525
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 139/311 (44%), Gaps = 9/311 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LI LC S A+ V +PD+ +Y ++ G+ L + R + D
Sbjct: 100 LIKKLCASGRTAEARRVLAAC-----EPDVMAYNAMVAGYCVTGQL---DAARRLVADMP 151
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
EPD +Y +I C R A+ + +M C P + L+ +A+
Sbjct: 152 MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAM 211
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + + +G P+ TYN VV C R++DA + + G PNT +Y+IVL L
Sbjct: 212 KLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGL 271
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
A R E+A + MS+K G P V T+ +++ C V+ AM + D++ G P
Sbjct: 272 CTAERWEDAEKLMAEMSQK-GYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPN 330
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
Y+ ++++ C + K+D A + + M+ G P ++ L AL G + AV L
Sbjct: 331 SLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLH 390
Query: 316 KIDKLRKTPLV 326
++ TP++
Sbjct: 391 QLKDKGCTPVL 401
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 138/265 (52%), Gaps = 1/265 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ + N LI++ C V A V K+ K PD ++T L+ G +
Sbjct: 71 MDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 130
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M D+GF+P+VV+YG +IN C A+ L R ME NC+P I+ +
Sbjct: 131 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTS 190
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++++EA F Q +G P+ TY ++V A C ++++M
Sbjct: 191 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 250
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + V+ L K G+ EA+ + M ++ G EP V TY ++ C +++D A
Sbjct: 251 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR-GVEPDVVTYTTLMDGHCLQSEMDEA 309
Query: 241 MRIWDEMKARGVLPVMHMYSTLINS 265
++++D M +G P + Y+TLIN+
Sbjct: 310 VKVFDMMVRKGFAPDVISYTTLINA 334
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 146/320 (45%), Gaps = 13/320 (4%)
Query: 22 KSRH---VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
KS H ++ A F+++ P I + LL + K+ ++ + +M G P
Sbjct: 19 KSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPP 78
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
+V + I+IN+ C R A + ++ +P P F TLI GL E ++ EAL F
Sbjct: 79 NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 138
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+ GF+P TY ++ C + A R++ M + P+ Y ++ L K
Sbjct: 139 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 198
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
+ EA+++F +M + G P + TY +V C + + ++M +LP + +
Sbjct: 199 RQVTEAFNLFSQMVGQ-GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVI 257
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDEGMEETAVVLAQK 316
+ST++++LC E K+ +A + M+ G+ P ++ L L+ E M+E V
Sbjct: 258 FSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE-MDEAVKVFDMM 316
Query: 317 I------DKLRKTPLVDRGQ 330
+ D + T L++ G+
Sbjct: 317 VRKGFAPDVISYTTLINAGK 336
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 144/318 (45%), Gaps = 3/318 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF +L+ ++ K +H + +M P++ + IL+ + + V ++
Sbjct: 47 DFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI 106
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G +PD ++ +I C + EA+ LF +M +P+ + TLINGL
Sbjct: 107 LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNT 166
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
S A++ ++ +P+ Y +++ + C ++ +A+ + +M GI P+ TY +
Sbjct: 167 SAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSL 226
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H L + ++ +M P V + VV C +V A I D M RG
Sbjct: 227 VHALCNLCEWKHVTTLLNQMVNSK-ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 285
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
V P + Y+TL++ C + ++D+A K F M+ G P ++ L A + +G V
Sbjct: 286 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDG--GGLV 343
Query: 312 VLAQKIDKLRKTPLVDRG 329
L + I +++TP +G
Sbjct: 344 SLQEVIGLVKETPDAVKG 361
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 37/178 (20%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD F+ ++D LCK V A E+ D M +R +PD+ +YT L++G Q + +
Sbjct: 252 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 311
Query: 67 VYREMKDDGFEPDVVSYGIMINA----------------------------------HCS 92
V+ M GF PDV+SY +INA
Sbjct: 312 VFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDK 371
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
K +++ L EM + P+ IF T+++ L E ++ EA KRG EP A
Sbjct: 372 MKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNA 429
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ N L+ +LCK ++ A++VFD M + DI SY I+L G+ +
Sbjct: 312 MTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGC 371
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ + E++ M DG PD + ++I A+ D A +F EM +P + T
Sbjct: 372 LVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYST 431
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L ++ +A++ F Q +G P TY+ ++ +C + A ++ +M G
Sbjct: 432 VIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG 491
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ ++ ++++L K GR +A ++F + G P V Y ++ +C +++ A
Sbjct: 492 MRPDIGCFNFIINNLCKLGRVMDAQNIFD-FTISIGLHPNVMVYNTLMDGYCLVGKMENA 550
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R++D M + G+ P + +Y TL+N C ++D+ F+E+L GI+P L++ +
Sbjct: 551 LRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHG 610
Query: 301 LRDEG 305
L G
Sbjct: 611 LFQAG 615
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 150/347 (43%), Gaps = 41/347 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L +N +++ LCK+R +++A+ + +M + PD +Y L+ G+
Sbjct: 242 MVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQ 301
Query: 61 LLSMNEVYREMKDDGFEPDVV-----------------------------------SYGI 85
V ++M G PDVV SY I
Sbjct: 302 WKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKI 361
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
M+N + + + ELF M + P HIF LI L A F + +++G
Sbjct: 362 MLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQG 421
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
EP+ TY+ V+ A C +++DA ++M G+ P+ TY ++ G +A
Sbjct: 422 VEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAK 481
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ +M K G P + + ++ C +V A I+D + G+ P + +Y+TL++
Sbjct: 482 DLVLQMMNK-GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDG 540
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-----KQALRDEGME 307
C K+++A + F M+ GI+P ++ L K DEG+
Sbjct: 541 YCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLS 587
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 146/306 (47%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ ++ +I LC+ ++ A E F++M + P I +Y L++G+ +LL
Sbjct: 421 GVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKA 480
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M + G PD+ + +IN C R +A +F + P+ ++ TL++G
Sbjct: 481 KDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDG 540
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ AL+ F G +P Y +V YC RI++ + E+ GI P+
Sbjct: 541 YCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPS 600
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T Y+I+LH L +AGRT A F M+ + G TY IV+ N+ D A+ ++
Sbjct: 601 TTLYNIILHGLFQAGRTVPAKVKFHEMT-ESGIAMDRYTYSIVLGGLFKNSCSDEAILLF 659
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
E+ A V + + +I + ++++A F + G+ P +S + L E
Sbjct: 660 KELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKE 719
Query: 305 GMEETA 310
G+ E A
Sbjct: 720 GLVEEA 725
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 147/307 (47%), Gaps = 3/307 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQ 58
M G ++ + ++ +LC R +A E+ M + P+ +Y +++G+ ++
Sbjct: 170 MPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKE 229
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ +++ EM G PD+ +Y ++NA C A+ D+A + R+M P +
Sbjct: 230 GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTY 289
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI G S + EA++ + +G P+ T N+++ + C +I DA + D M
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM 349
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G + +Y I+L+ G + +F M G P + ++++ + +D
Sbjct: 350 KGQKTDIFSYKIMLNGYATKGCLVDLTELFNLM-LSDGIAPDSHIFNVLIKAYAKCGMLD 408
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A I++EM+ +GV P + YST+I +LC K+DDA + F +M+D G+ P + L
Sbjct: 409 RATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLI 468
Query: 299 QALRDEG 305
Q G
Sbjct: 469 QGFCTHG 475
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 131/277 (47%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID K V +A ++F++M +R PD+ +Y ++ + + + + R+M
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMV 278
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PD +Y +I + S ++ EAV + ++M + P +L+ L ++
Sbjct: 279 DKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIK 338
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F +G + + +Y ++ Y + D + + M GI P++ +++++
Sbjct: 339 DARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLI 398
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G + A +F M R+ G EP V TY V+ C ++D A+ +++M +GV
Sbjct: 399 KAYAKCGMLDRATIIFNEM-REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGV 457
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + Y LI C L A +M++ G+RP
Sbjct: 458 APSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRP 494
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 41/263 (15%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G++ ++ FN +I+ LCK V AQ +FD P++ Y L++G+ G+ +N
Sbjct: 491 GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENA 550
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L V+ M G +P+VV YG ++N +C R DE + LFRE+ KPS ++ +
Sbjct: 551 L---RVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNII 607
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM----------------- 164
++GL R A F + + G + TY+ V+G +
Sbjct: 608 LHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNV 667
Query: 165 ------------------RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
R+ +A + + + G+ P+ TY I++ +LIK G EEA
Sbjct: 668 KIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADD 727
Query: 207 VFKRMSRKPGTEPTVSTYEIVVR 229
+F M +P VVR
Sbjct: 728 MFSSMENAGCEQPNSQLLNHVVR 750
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 6/225 (2%)
Query: 99 AVELFREMEATN----CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
AV LF + + P+ H + L++ R L FFGQ K G + +
Sbjct: 88 AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147
Query: 155 AVVGAYCWSMRINDAYR-MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
++ C + R +A ++ M G P+ +Y IVL L ++ +A + + M+
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE 207
Query: 214 KPGT-EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
P Y V+ F V+ A +++EM RG+ P + Y+ ++N+LC +
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAM 267
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
D A ++M+D G+ P +++L G + AV +++K+
Sbjct: 268 DKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKM 312
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/161 (18%), Positives = 71/161 (44%), Gaps = 1/161 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + ++ ++ L K+ + A +F ++ DI + I++ G Q +
Sbjct: 627 MTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRR 686
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC-KPSPHIFC 119
+ +++ + G P VV+Y IM+ +EA ++F ME C +P+ +
Sbjct: 687 VEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLN 746
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
++ L ++ + A + + +R F + T ++ +
Sbjct: 747 HVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLF 787
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 149/275 (54%), Gaps = 8/275 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N +++ LCK+R +A EV +M+ + PD+ +Y+ ++ G+ +Q + E+ REM
Sbjct: 44 YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM 103
Query: 72 -KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
DG PDVV+Y +++ C + D A E+ REM+ +P F LI G + ++
Sbjct: 104 VTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARK 163
Query: 131 LSEALQFFGQS-KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKCGIGPNTRT 187
+ EAL+ + + ++P+ TY A++ +C S + A +M+ M RKC PN T
Sbjct: 164 VDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKC--VPNVVT 221
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y +LH L KAG ++A +F+RM+ K G P V TY ++ C +VD A + DEM
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSK-GCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 280
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
A P Y+ L++ C ++++A + F+EM
Sbjct: 281 TATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEM 315
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 166/324 (51%), Gaps = 3/324 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ + ++D LC+ ++RA E+ +MK + +PD +++ L+ GW + +
Sbjct: 108 GIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 167
Query: 65 NEVYRE-MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y+E + ++PDVV+Y +I+ C + ++A+++ ME C P+ + +L++
Sbjct: 168 LKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLH 227
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL L +AL F + +G P TY ++ C + +++ A +MDEM P
Sbjct: 228 GLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPP 287
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+T +Y+ +L + GR EEA +FK M+ K P TY +VR FC ++++ A +
Sbjct: 288 DTVSYNALLDGYCRLGRIEEAKQLFKEMATK-SCLPDRITYTCLVRGFCNASRLEEARFL 346
Query: 244 WDEMK-ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ MK A G+ P + YS ++ + +A ++ QEM+ + P +S+L L
Sbjct: 347 LENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLC 406
Query: 303 DEGMEETAVVLAQKIDKLRKTPLV 326
G + A+ + + + R P V
Sbjct: 407 KAGRVDHAMEVLKNMVNKRVEPSV 430
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 150/305 (49%), Gaps = 2/305 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K ++ + LID CKS ++E+A ++ M+ R+ P++ +Y+ LL G + +L +
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++R M G P+VV+Y +I+ C+A + D A L EM AT C P + L++G
Sbjct: 241 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGIGPNT 185
R+ EA Q F + + P+ TY +V +C + R+ +A +++ M+ GI P+
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY IV+ +A R EA + M + P TY ++ C +VD AM +
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIAR-NVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + V P + ++++I +LC +D+A K M G+ P ++ L + G
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479
Query: 306 MEETA 310
E A
Sbjct: 480 RMEIA 484
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 149/300 (49%), Gaps = 4/300 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDK-MKKRRFDPDIKSYTILLEGWGQQKNL 61
LK PD F+ LI C +R V+ A +++ + + + PD+ +YT L++G+ + NL
Sbjct: 141 LKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNL 200
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
++ M+ P+VV+Y +++ C A D+A++LFR M + C P+ + TL
Sbjct: 201 EKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL 260
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL + ++ A + P+ +YNA++ YC RI +A ++ EM
Sbjct: 261 IHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSC 320
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY ++ A R EEA + + M G +P V TY IVV + + A
Sbjct: 321 LPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAA 380
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM AR V P YS+LI+ LC ++D A + + M++ + P F+++ AL
Sbjct: 381 EFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGAL 440
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 140/283 (49%), Gaps = 7/283 (2%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N L+D C+ +E A+++F +M + PD +YT L+ G+ L + M
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350
Query: 72 KDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
K G +PDVV+Y I++ + AKR+ EA E +EM A N P+ + +LI+GL R
Sbjct: 351 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 410
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ A++ + EP T+N+V+GA C +++A++++ M G+ P TY
Sbjct: 411 VDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 470
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV------STYEIVVRMFCYNAQVDMAMRIW 244
+L + GR E AY +F+ M +K + + ++R C ++D AM +
Sbjct: 471 LLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVV 530
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+E+++R P +++ L + ++A K + +G+
Sbjct: 531 EELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 128/261 (49%), Gaps = 3/261 (1%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P + ++TI+++G+ + L + +M++ P+ +Y +++N C A+ +A E+
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 103 FREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR-GFEPEAPTYNAVVGAY 160
+EM + + P + T+ING + + A + + R G P+ TY +VV
Sbjct: 64 LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C +++ A M+ EM+ G+ P+ T+ ++ A + +EA ++K + +P
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V TY ++ FC + ++ AM++ M+ R +P + YS+L++ LC LD A F+
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243
Query: 281 EMLDIGIRPPGQLFSNLKQAL 301
M G P ++ L L
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGL 264
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 2/152 (1%)
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+P T+ ++ +C + ++ A ++MR+ + PN RTY++V++ L KA T +AY
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR-GVLPVMHMYSTLINS 265
V K M P + TY V+ FC ++D A I EM R G+ P + Y+++++
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
LC + K+D AC+ +EM G+ P FS L
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 154
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 8/324 (2%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ FG+ + N L+ LCK +E A +V D++ P++ +YT +L G+ + ++
Sbjct: 181 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDM 240
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
S V EM D G+ PD ++Y ++++ +C R+ EA + +ME +P+ + +
Sbjct: 241 ESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 300
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I L EK+ EA F + R F P++ V+ A C ++++A + +M K
Sbjct: 301 IRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 360
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ ++H L K GR EA +F + G+ P++ TY ++ C ++ A
Sbjct: 361 MPDNALLSTLIHWLCKEGRVSEARKLFDEFDK--GSIPSLLTYNTLIAGMCEKGELTEAG 418
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R+WD+M R P Y+ LI L + + + +EML+ G P F L + L
Sbjct: 419 RLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGL 478
Query: 302 RDEGMEETAV------VLAQKIDK 319
+ G EE A+ V+ K+DK
Sbjct: 479 QKLGKEEDAIKIVSMAVMNGKVDK 502
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 107/263 (40%), Gaps = 37/263 (14%)
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR-GFEPEAP 151
A RY+ ++ +F + K S TL+N L +R F SK+ G P
Sbjct: 131 AGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIF 190
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI--------------- 196
T N +V A C I AY+++DE+ G+ PN TY +L +
Sbjct: 191 TCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEM 250
Query: 197 --------------------KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
K GR EA +V M + EP TY +++R C +
Sbjct: 251 LDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNE-IEPNEVTYGVMIRALCKEKK 309
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
A ++DEM R +P + +I++LC + K+D+AC +++ML P L S
Sbjct: 310 SGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 369
Query: 297 LKQALRDEGMEETAVVLAQKIDK 319
L L EG A L + DK
Sbjct: 370 LIHWLCKEGRVSEARKLFDEFDK 392
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 143/284 (50%), Gaps = 13/284 (4%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL----- 61
+PD +N ++D LCKS VE A +F++M++ P+ +S+ ++ G QQ +
Sbjct: 425 VPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQ 484
Query: 62 -LSMNEVYR---EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
++E +R M DDG PDVV+Y +I+ CS R D+A L +M CKP+
Sbjct: 485 RGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVT 544
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
TLI+GL R+ EA + G P+ TYN +V +C + + A ++ +M
Sbjct: 545 QNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMV 604
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G+ PN TY ++ L KA R EA VF +M + G P + TY ++ FC QV
Sbjct: 605 ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQM-KSSGCAPNLFTYTALILGFCSAGQV 663
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
D ++++ EM G+ P +Y TL LC + A + +E
Sbjct: 664 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 707
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 145/294 (49%), Gaps = 10/294 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + LI LC + + A+E+F M +R P +Y ++++ ++ L
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 412
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++M +DG PDVV+Y +++ C + R +EA+ LF EME C P+ T+I G
Sbjct: 413 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG 472
Query: 125 LGSEKR---------LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
L + + L EA + + G P+ TY+ ++ C R++DA ++++
Sbjct: 473 LCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 532
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M K P T + ++H L KAGR +EA V M G P V TY +V C
Sbjct: 533 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV-SSGQSPDVVTYNTLVHGHCRAG 591
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
Q + A + +M ARG+ P + Y+ L++ LC ++L +AC F +M G P
Sbjct: 592 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 645
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 151/310 (48%), Gaps = 10/310 (3%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L +N +I LC++ ++ A ++F+KM +R PD SY IL++G + L +++
Sbjct: 288 LRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQ 347
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
++ G P V+Y +I+ C A +D+A ELF +M C PSP + +I+
Sbjct: 348 KLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG 407
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
L EA + + G P+ TYN V+ C S R+ +A + +EM + G PN R+++
Sbjct: 408 MLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHN 467
Query: 190 IVLHHLIKA---------GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
++ L + G+ +EA+ + KRM+ G P V TY ++ C A+VD A
Sbjct: 468 TIILGLCQQSKIDQACQRGKLDEAFRLLKRMT-DDGHVPDVVTYSTLISGLCSIARVDDA 526
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++M R P + +TLI+ LC ++ +A + M+ G P ++ L
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 586
Query: 301 LRDEGMEETA 310
G E A
Sbjct: 587 HCRAGQTERA 596
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 4/281 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ LI LC V+ A+ + + M KR+ P + + L+ G + + E
Sbjct: 504 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 563
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V M G PDVV+Y +++ HC A + + A EL +M A P+ + L++GL
Sbjct: 564 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 623
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL EA F Q K G P TY A++ +C + +++ ++ EM GI P+
Sbjct: 624 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 683
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP-TVSTYEIVVRMFCYNAQVDMAMRIWD 245
Y + L K+GR+ A + + +E Y V +++MA+
Sbjct: 684 VYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVR 743
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+M G LP ++L+ LC + +A +E++D+
Sbjct: 744 DMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLA 784
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 16/307 (5%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK------NLLS 63
L N L++ C V++A+E+ M PD SY +L+G + L
Sbjct: 212 LVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFG 271
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E+ P + Y I+I C R DEAV++F +M N P + LI+
Sbjct: 272 DRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILID 331
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL +L++A F + G P Y +++ C + +DA + +M + G P
Sbjct: 332 GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPP 391
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY++++ K G EEA + K+M + G P V TY V+ C +++V+ A+ +
Sbjct: 392 SPVTYNVMIDASCKRGMLEEACDLIKKMI-EDGHVPDVVTYNTVMDGLCKSSRVEEALLL 450
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC---------KYFQEMLDIGIRPPGQLF 294
++EM+ G P ++T+I LC + K+D AC + + M D G P +
Sbjct: 451 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTY 510
Query: 295 SNLKQAL 301
S L L
Sbjct: 511 STLISGL 517
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 16/292 (5%)
Query: 13 FNRLIDTLCKSRHVERAQEVFD------KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+ ++D LCK+ VE A +F P ++ Y I++ G Q + +
Sbjct: 250 YCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQ 309
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ +M + PD SYGI+I+ A + ++A LF+++ + PS + +LI+GL
Sbjct: 310 MFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLC 369
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+A + F +RG P TYN ++ A C + +A ++ +M + G P+
Sbjct: 370 MANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVV 429
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM------- 239
TY+ V+ L K+ R EEA +F M R G P ++ ++ C +++D
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERL-GCTPNRRSHNTIILGLCQQSKIDQACQRGKL 488
Query: 240 --AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A R+ M G +P + YSTLI+ LC ++DDA ++M+ +P
Sbjct: 489 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 12/294 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F ++ LCK+ ++ A+ V D+M+ R P + + L + ++ ++ M
Sbjct: 82 FTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP 141
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ +Y I++ A C A R D+A+EL R M + +++ GL R+
Sbjct: 142 ----VANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRID 197
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EALQ + ++++ EP T N ++ +C +++ A ++ M P+ +Y VL
Sbjct: 198 EALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVL 254
Query: 193 HHLIKAGRTEEAYSVF-----KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
L KAGR EEA +F S + P++ Y IV+ C N ++D A++++++M
Sbjct: 255 DGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKM 314
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R V P Y LI+ L KL+DA FQ++L G+ P +++L L
Sbjct: 315 NERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGL 368
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 45/311 (14%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ LCK+ V+ A E+ M ++R S +L G + +VYRE +
Sbjct: 148 YNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENR 207
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
EP +V+ +++ CS + D+A EL R M C P +CT+++GL R+
Sbjct: 208 R---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVE 264
Query: 133 EALQFFGQSKKRGFEPEAPT------YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
EA++ FG + + + YN V+ C + RI++A +M ++M + + P++
Sbjct: 265 EAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSW 324
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y I++ L KAG+ +A ++F+++
Sbjct: 325 SYGILIDGLAKAGKLNDARNLFQKLLHS-------------------------------- 352
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
GV P Y++LI+ LC + DDA + F +M G P ++ + A GM
Sbjct: 353 ----GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408
Query: 307 EETAVVLAQKI 317
E A L +K+
Sbjct: 409 LEEACDLIKKM 419
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 2/213 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N L+ C++ ERA+E+ M R P++ +YT L+ G +
Sbjct: 568 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 627
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V+ +MK G P++ +Y +I CSA + D ++LF EM P ++ T
Sbjct: 628 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 687
Query: 121 LINGLGSEKRLSEALQFF--GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L L R + AL+ G+ R Y V + ++ A + +M +
Sbjct: 688 LAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVR 747
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
G P ++ L K+G+ EA +V + +
Sbjct: 748 GGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 8/212 (3%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M G P + + +I C+ R EAV++F ME + P P ++ LI+ L S+++
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSL-SKRQ 58
Query: 131 LSEALQFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+EA++ Q RG P++ T+ ++ C + ++++A +MDEMR I P T
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+ H L G E A+ + + M S Y IVV C A+VD A+ + M
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMPVA-----NSSAYNIVVVALCKAARVDDALELARTMSE 173
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
+ + +++ L ++D+A + ++E
Sbjct: 174 KRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE 205
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GI P + V+ GRT EA +F M P V Y +++ + +
Sbjct: 5 GIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQETEA 62
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ M RG P ++T++ LC K+D+A EM
Sbjct: 63 VKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEM 105
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 143/274 (52%), Gaps = 2/274 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ--QKNLLSMNEVYR 69
DFN+L+ ++ K +H + +M P+I + IL+ + + + ++
Sbjct: 63 DFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFD 122
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M +GF PDVV+YG +IN C A+ L M NC+P+ + T+I+ L ++
Sbjct: 123 KMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDR 182
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+++EA F + +G P+ TYN+++ A C +++EM I P+ +++
Sbjct: 183 QVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFN 242
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
V+ L K G+ EA+ V +M ++ G P V +Y ++ +C ++D AM ++ EM
Sbjct: 243 TVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 302
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+ ++P YSTLI+ LCH ++L DA F EM+
Sbjct: 303 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 336
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 149/306 (48%), Gaps = 2/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID+LCK R V A +F +M + PDI +Y L+ + + EM
Sbjct: 171 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 230
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRL 131
D PDVVS+ +++A C + EA ++ +M + C P+ + TLING +R+
Sbjct: 231 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRI 290
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A+ FG+ ++ P+ TY+ ++ C R+ DA + EM C PN TY I+
Sbjct: 291 DKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRIL 350
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L +L K EA ++ K + +P + I + C +++ A ++ + ++G
Sbjct: 351 LDYLCKNRYLAEAMALLKAI-EGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 409
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ P + YS +IN LC LD+A K F+EM + G G +++ + + A+
Sbjct: 410 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAI 469
Query: 312 VLAQKI 317
L Q++
Sbjct: 470 QLLQEM 475
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 7/309 (2%)
Query: 22 KSRH---VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
KS H ++ A F++M + + P + LL + K+ ++ + +M G P
Sbjct: 35 KSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP 94
Query: 79 DVVSYGIMINAHCSAKR--YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
++ + I+IN+ C R EA+ LF +M +P + TLINGL S A++
Sbjct: 95 NIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 154
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
G ++ +P YN ++ + C ++ +A+ + EM GI P+ TY+ ++H L
Sbjct: 155 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 214
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG-VLPV 255
+ ++ M P V ++ VV C +V A + D+M RG +P
Sbjct: 215 NLCEWKHVATLLNEMVDSK-IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPN 273
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ Y+TLIN C ++D A F EM + P +S L L + A+ L
Sbjct: 274 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 333
Query: 316 KIDKLRKTP 324
++ + P
Sbjct: 334 EMVACSQIP 342
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N LI+ CK + +++A +F +M ++ PD +Y+ L+ G + L
Sbjct: 269 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 328
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM P++V+Y I+++ C + EA+ L + +E +N P + I+G
Sbjct: 329 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 388
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L A F +G +P+ TY+ ++ C +++A ++ EM + G N
Sbjct: 389 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 448
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
Y+ + ++ T A + + M + G ST + V+M
Sbjct: 449 GCIYNTITRGFLRNNETSRAIQLLQEMVAR-GFSADASTMTLFVKML 494
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 158/317 (49%), Gaps = 5/317 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + FN LI C+++ +E A ++F KM R F D SY L+EG+ +
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGR 214
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++REM +PD+ ++ ++ C A R +E + + ++M+ +P+ +
Sbjct: 215 IDEALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAA 270
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ E++ EA + + G P T VV AYC R++ A R+ + MR G
Sbjct: 271 LVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+ ++ AG+ +A ++ +M R+ G EP V TY +++R C + + A
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQM-RECGVEPDVVTYNLLIRGQCIDGHIGSA 389
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ M+ G+ + Y+ LI++LC K+D+AC F + GIRP F+ +
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449
Query: 301 LRDEGMEETAVVLAQKI 317
L G + A + +
Sbjct: 450 LCKAGKFDVACTFLENM 466
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 1/274 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ LC + E + KMK+ + P ++Y L++ W +++ ++ EM D G
Sbjct: 236 LVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSG 295
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P VV+ I++NA+C R AV +F M C+P+ + ++ G + ++ +A+
Sbjct: 296 LMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAM 355
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q ++ G EP+ TYN ++ C I A+R++ M G+ + TY++++ L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDAL 415
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G+ +EA S+F + + G P T+ V+ C + D+A + M + G P
Sbjct: 416 CKTGKVDEACSLFDGLEYR-GIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPD 474
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ YS I +LC + + EML ++P
Sbjct: 475 TYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKP 508
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 138/309 (44%), Gaps = 1/309 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+++ C+ + A VF+ M+ + +P++ +Y +++G+ + + +M++ G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECG 365
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
EPDVV+Y ++I C A L R ME + + LI+ L ++ EA
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + RG P + T+N V+ C + + + A ++ M G P+T TY + +L
Sbjct: 426 SLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENL 485
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K ++E M +K +P+ Y IV+ +A RIW +M ++G P
Sbjct: 486 CKTKGSQEGLFFIDEMLQK-DVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPD 544
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ Y+T + + C+E +LD+A EM ++ L G + AV + +
Sbjct: 545 VVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILK 604
Query: 316 KIDKLRKTP 324
+ + P
Sbjct: 605 HMTGVASMP 613
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 133/286 (46%), Gaps = 3/286 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N ++ C + V +A + D+M++ +PD+ +Y +L+ G ++ S
Sbjct: 330 GCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSA 389
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ R M+ +G D +Y ++I+A C + DEA LF +E +P+ F T+ING
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + A F G+ P+ TY+ + C + + +DEM + + P+
Sbjct: 450 LCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPS 509
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T Y IV++ L A ++ +M + G P V TY VR +C ++D A +
Sbjct: 510 TVNYTIVINRLFNERNYGLATRIWGQMVSQ-GCSPDVVTYTTSVRAYCNEGRLDEAENVV 568
Query: 245 DEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM K R ++ M Y+TLI+ + D A + M + P
Sbjct: 569 TEMKKCRTIVDAM-AYNTLIDGHTSIGQTDRAVTILKHMTGVASMP 613
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 146/321 (45%), Gaps = 1/321 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + L+D C+ + E A+++ ++M P + + TI++ + ++
Sbjct: 256 MKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGR 315
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ M+ G EP+V +Y ++ C+A + +A+ L +M +P +
Sbjct: 316 MSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNL 375
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + + A + + G + TYN ++ A C + ++++A + D + G
Sbjct: 376 LIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN+ T++ V++ L KAG+ + A + + M G P TY + C
Sbjct: 436 IRPNSVTFNTVINGLCKAGKFDVACTFLENMI-SAGYAPDTYTYSPFIENLCKTKGSQEG 494
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ DEM + V P Y+ +IN L +E A + + +M+ G P ++ +A
Sbjct: 495 LFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRA 554
Query: 301 LRDEGMEETAVVLAQKIDKLR 321
+EG + A + ++ K R
Sbjct: 555 YCNEGRLDEAENVVTEMKKCR 575
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 11/259 (4%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P +Y +I A C A M + +P F +LI G ++L A
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + RGF +A +Y A++ +C + RI++A + EM + P+ T+ ++ L
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
AGR EE + ++M ++ G PT Y +V ++C + + A +I +EM G++P +
Sbjct: 243 AGRGEEGLCMLQKM-KELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ ++N+ C E ++ A + F+ M G P ++ + Q + G A+ L ++
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361
Query: 318 DKLRKTP------LVDRGQ 330
+ P L+ RGQ
Sbjct: 362 RECGVEPDVVTYNLLIRGQ 380
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 108/312 (34%), Gaps = 52/312 (16%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ +I+ L R+ A ++ +M + PD+ +YT + + + L
Sbjct: 506 VKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAE 565
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAV------------------------- 100
V EMK D ++Y +I+ H S + D AV
Sbjct: 566 NVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHL 625
Query: 101 --------------------------ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
ELF M+ + S + +++ G E+RL E
Sbjct: 626 LQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEV 685
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
K+ YNA+V +C +DA+ ++ M G PN Y +L
Sbjct: 686 TSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSG 745
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L G+ + A +F R SR +++++ F DM + ++ P
Sbjct: 746 LTAEGQADRAKEIF-RSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKP 804
Query: 255 VMHMYSTLINSL 266
Y+ L L
Sbjct: 805 SDETYAMLTEEL 816
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 39/174 (22%)
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA---------- 235
R + +L H + T +F M R PT +TY ++R C A
Sbjct: 94 RPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLS 153
Query: 236 -------------------------QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
Q+++A ++ +M RG Y+ LI C
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAG 213
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++D+A + F+EM +P + L + L D G E + + QK+ +L P
Sbjct: 214 RIDEALELFREM----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRP 263
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 155/287 (54%), Gaps = 9/287 (3%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKN 60
D + +L ++ +I+ CK ++RA E+ +M R PD+ +YT +++G +
Sbjct: 37 DGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGK 96
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ REMK G EPD ++ +I C+A++ DEA++L++E+ ++C+
Sbjct: 97 MDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSA 156
Query: 121 LINGLGSEKRLSEALQFFGQSKKR---GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM- 176
LI GL E+R+ EA + F + + R ++P+ TY A++ +C S + A +M+ M
Sbjct: 157 LITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 216
Query: 177 -RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
RKC PN TY +LH L KAG ++A +F+RM+ K G P V TY ++ C
Sbjct: 217 GRKC--VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSK-GCVPNVVTYTTLIHGLCAAH 273
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+VD A + DEM A Y+ L++ C ++++A + F+EM
Sbjct: 274 KVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEM 320
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 157/341 (46%), Gaps = 43/341 (12%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K ++ + LID CKS ++E+A ++ M+ R+ P++ +Y+ LL G + +L +
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYD----------------------------- 97
++R M G P+VV+Y +I+ C+A + D
Sbjct: 246 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305
Query: 98 ------EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR--GFEPE 149
EA +LF+EM A +C P + L+ G + RL EA +F ++ K G +P+
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA-RFLLENMKTAAGIDPD 364
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
TY+ VV Y + R +A + EM + PN TY ++ L KAGR A V K
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLK 424
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+ + P V TY IV+ C + + A+ + +EM + V P + ++++I +LC
Sbjct: 425 NVDK-----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRL 479
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+D+A K M G+ P ++ L + G E A
Sbjct: 480 GDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 520
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 151/314 (48%), Gaps = 7/314 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR---FDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
LI LC+ R + A E+F +M+ R + PD+ +YT L++G+ + NL ++ M+
Sbjct: 157 LITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME 216
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+VV+Y +++ C A D+A++LFR M + C P+ + TLI+GL + ++
Sbjct: 217 GRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD 276
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + +YNA++ YC RI +A ++ EM P+ TY ++
Sbjct: 277 AARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLV 336
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
A R EEA + + M G +P V TY IVV + + A EM AR V
Sbjct: 337 RGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNV 396
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P YS+LI+ LC +++ A E+L +P ++ + + L E A+
Sbjct: 397 APNAVTYSSLIDGLCKAGRVNHA----MEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALT 452
Query: 313 LAQKIDKLRKTPLV 326
L +++ R P V
Sbjct: 453 LLEEMVNKRVEPSV 466
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 159/354 (44%), Gaps = 40/354 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ + ++D LC+ ++RA E+ +MK + +PD +++ L+ GW + +
Sbjct: 76 GMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEA 135
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE------------------- 105
++Y+E+ D VS +I C +R EA ELF+E
Sbjct: 136 LKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTAL 195
Query: 106 -------------------MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
ME C P+ + +L++GL L +AL F + +G
Sbjct: 196 IDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 255
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P TY ++ C + +++ A +MDEM +T +Y+ +L + GR EEA
Sbjct: 256 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQ 315
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK-ARGVLPVMHMYSTLINS 265
+FK M+ K P TY +VR FC ++++ A + + MK A G+ P + YS ++
Sbjct: 316 LFKEMAAKSCL-PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAG 374
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ +A ++ QEM+ + P +S+L L G A+ + + +DK
Sbjct: 375 YSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK 428
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 140/291 (48%), Gaps = 14/291 (4%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLL 62
K LPD + L+ C + +E A+ + + MK DPD+ +Y+I++ G+ + K +
Sbjct: 323 KSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFV 382
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E +EM P+ V+Y +I+ C A R + A+E+ + ++ KP + +I
Sbjct: 383 EAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYTIVI 438
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GL R EAL + + EP T+N+V+GA C +++A++++ M G+
Sbjct: 439 EGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 498
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS------TYEIVVRMFCYNAQ 236
P TY +L + GR E AY +F+ M RK + + + ++R C +
Sbjct: 499 PGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKARE 558
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+D AM + +E+++R P +++ L + ++A K + +G+
Sbjct: 559 IDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 133/283 (46%), Gaps = 6/283 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + LI LC + V+ A+ + D+M D SY LL+G+ +
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFC 119
+ ++++EM PD ++Y ++ C+A R +EA L M+ A P +
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
++ G KR EA +F + R P A TY++++ C + R+N A ++ + K
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK- 428
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P+ TY IV+ L RTEEA ++ + M K EP+V T+ V+ C +D
Sbjct: 429 ---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKR-VEPSVGTFNSVIGALCRLGDMDE 484
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
A ++ M A G+ P M Y+TL+ +++ A + F+ M
Sbjct: 485 AWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 527
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 133/263 (50%), Gaps = 4/263 (1%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVE 101
P+ ++Y +++ G + + EV +EM+D PD+V+Y +IN C D A E
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 102 LFREMEATN-CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
+ REM + P + ++++GL + ++ A + + K +G EP+ T++A++ +
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS-RKPGT-E 218
C + ++++A ++ E+ + + ++ L + R EAY +F+ M R+ G +
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V TY ++ FC + ++ AM++ M+ R +P + YS+L++ LC LD A
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246
Query: 279 FQEMLDIGIRPPGQLFSNLKQAL 301
F+ M G P ++ L L
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGL 269
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN RTY++V++ L KA T +AY V K M P + TY V+ FC ++D A
Sbjct: 5 VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64
Query: 241 MRIWDEMKAR-GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I EM R G+ P + Y+++++ LC + K+D AC+ +EM G+ P FS L
Sbjct: 65 CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 144/285 (50%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + FN ++ LCK R ++A+EVF M + PD++S+ IL+ G+ + +
Sbjct: 222 GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEA 281
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ Y+EM+ G PDVVS+ +I + + D A REM+ P I+ +I G
Sbjct: 282 MKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGG 341
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+SEAL+ + G P+ TYN ++ C R+ DA +++EM++ G+ P+
Sbjct: 342 FCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPD 401
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++H + G E+A +F + + P V Y ++ C + A +W
Sbjct: 402 LCTFTTLIHGYCRDGNFEKALQLFDTLLHQR-LRPDVVAYNSLIDGMCRKGDLAKANELW 460
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D+M AR + P YS LI+S C + ++++A + EM+ G P
Sbjct: 461 DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLP 505
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 139/283 (49%), Gaps = 4/283 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N L++ LCK + A+E+ ++MK+R PD+ ++T L+ G+ + N +
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQ 423
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ + PDVV+Y +I+ C +A EL+ +M A P+ + LI+
Sbjct: 424 LFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHC 483
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ ++ EA F + +G P TYN+++ YC S + + + +M + I P+
Sbjct: 484 EKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLI 543
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T++ ++H IK A++VF M K +P TY +++ F ++ A R++ +
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIM-EKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKK 602
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M A G+ P + Y +LIN +A + EM+ G P
Sbjct: 603 MGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 147/349 (42%), Gaps = 37/349 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKS------------- 47
MD+ + ++ FN LI C+ VE A + + +M++R PD+ S
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGK 312
Query: 48 ----------------------YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
YT+++ G+ + ++ V EM G PDVV+Y
Sbjct: 313 MDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNT 372
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++N C R +A EL EM+ P F TLI+G + +ALQ F +
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR 432
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ YN+++ C + A + D+M I PN TY I++ + G+ EEA+
Sbjct: 433 LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAF 492
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
M K G P + TY +++ +C + V + +M +LP + ++TLI+
Sbjct: 493 GFLDEMVSK-GNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG 551
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVL 313
E+ + A F M ++P ++ + ++G MEE V
Sbjct: 552 YIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVF 600
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 135/287 (47%), Gaps = 3/287 (1%)
Query: 42 DPDIKSYT--ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
D ++ +YT I++ + + + V EM+ PDVV++ ++I+A A D A
Sbjct: 152 DSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA 211
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ L M KP F +++ GL +R +A + F + P+ ++N ++G
Sbjct: 212 IALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGG 271
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+C + +A + EM++ G+ P+ ++ ++ G+ + A + + M + G P
Sbjct: 272 FCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM-KGLGLVP 330
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
Y +V+ FC + A+R+ DEM G LP + Y+TL+N LC + +L DA +
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
EM + G+ P F+ L +G E A+ L + R P V
Sbjct: 391 NEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDV 437
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 125/254 (49%), Gaps = 1/254 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L F LI C+ + E+A ++FD + +R PD+ +Y L++G ++ +
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L NE++ +M P+ V+Y I+I++HC + +EA EM + P+ + +
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G + + QF + + P+ T+N ++ Y ++ A+ + + M K
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+++++ + G EEA VFK+M G EP TY ++ A
Sbjct: 573 VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMG-ASGIEPDRYTYMSLINGHVTAGNSKEA 631
Query: 241 MRIWDEMKARGVLP 254
++ DEM RG P
Sbjct: 632 FQLHDEMMHRGFAP 645
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 140/289 (48%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + + +I C++ + A V D+M PD+ +Y LL G +Q
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHR 382
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+ EMK+ G PD+ ++ +I+ +C +++A++LF + +P + +
Sbjct: 383 LLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNS 442
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ + L++A + + R P TY+ ++ ++C ++ +A+ +DEM G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+ ++ ++G ++ ++M + P + T+ ++ + + A
Sbjct: 503 NLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQD-NILPDLITFNTLIHGYIKEENMHGA 561
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+++ M+ V P Y+ +IN + +++A + F++M GI P
Sbjct: 562 FNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEP 610
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 86/174 (49%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID+ C+ VE A D+M + P+I +Y +++G+ + N+ + ++M
Sbjct: 475 YSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMM 534
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D PD++++ +I+ + + A +F ME +P + +ING + +
Sbjct: 535 QDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNME 594
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
EA + F + G EP+ TY +++ + + +A+++ DEM G P+ +
Sbjct: 595 EAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K ++ + +N +I+ + ++E A VF KM +PD +Y L+ G N
Sbjct: 568 MEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGN 627
Query: 61 LLSMNEVYREMKDDGFEPD 79
+++ EM GF PD
Sbjct: 628 SKEAFQLHDEMMHRGFAPD 646
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 159/333 (47%), Gaps = 37/333 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + +I+ LCK V+ A V DKM +R P++ +Y L++G+ + +L
Sbjct: 109 GCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGA 168
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-------------- 110
E+ R+M + G+ P+ ++Y +++ CS ++ D A++LF+EME +
Sbjct: 169 VELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVD 228
Query: 111 ----------------------CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C P+ + +L++GL +L EA + + G P
Sbjct: 229 SLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 288
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TYN ++ +C RI++AY +++EM G PN TY ++L K G+ E+A +
Sbjct: 289 NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLV 348
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+ M K G P + TY ++ MFC +V+ A ++ M +G +P + Y+T+I LC
Sbjct: 349 EVMVEK-GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 407
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
K+ + ++ML P F+ + A+
Sbjct: 408 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 158/318 (49%), Gaps = 6/318 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M + G + +N +ID CK ++ A + ++M P++ +YT+LL+ + G+
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
++ + + EV M + G+ P++ +Y +++ C + A +L M C P+
Sbjct: 341 AEDAIGLVEV---MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 397
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+I GL ++ E + Q P+ T+N ++ A C + R++ AY + + ++
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ G PN TY+ ++H L K+ R ++A + + M+RK G P + TY V+ C + +V
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 517
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D A +++ +M + G+ P YS +I+SLC +D+A + ML G P + L
Sbjct: 518 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 577
Query: 298 KQALRDEGMEETAVVLAQ 315
G + A+ + Q
Sbjct: 578 IDGFCKTGNLDKALEILQ 595
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 137/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GLK ++ LC + A F +M K PD +Y ++ G +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM D+GF P+V SY +++ C A R + A+ L +M C P + T
Sbjct: 60 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL ++ EA + + +RG +P TY +V +C ++ A ++ +M + G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+ ++H L + + A +FK M P V TY +V + +VD A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
R+ + M ++G P + YS+L++ LC KLD+A Q M G P
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 288
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 151/336 (44%), Gaps = 37/336 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L +N L+D CK VERA ++ M ++ P++ SY ++ G + +
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 414
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M + PD+V++ +I+A C R D A ELF ++ + C P+ + +L++G
Sbjct: 415 VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 474
Query: 125 LGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +R +A + ++K+G P+ TYN V+ C S R++ AY++ +M G+ P
Sbjct: 475 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 534
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY IV+ L K +EA +V + M K G +P TY ++ FC +D A+ I
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELM-LKNGFDPGAITYGTLIDGFCKTGNLDKALEI 593
Query: 244 ---------------------WDEMKAR--------------GVLPVMHMYSTLINSLCH 268
W + R G++P Y+TL+ C
Sbjct: 594 LQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCD 653
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ +DA F+ M G P ++ L L D+
Sbjct: 654 ASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDK 689
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 146/317 (46%), Gaps = 19/317 (5%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ ++D+L KS V+ A + + M + P++ +Y+ LL G + L + + M
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 282
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P++V+Y +I+ HC R DEA L EM C+P+ + L++ +
Sbjct: 283 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 342
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ ++G+ P TYN+++ +C + A +++ M + G PN +Y+ V+
Sbjct: 343 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 402
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KA + E + ++M P + T+ ++ C +VD+A +++ ++ G
Sbjct: 403 AGLCKATKVHEGVLLLEQMLSN-NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGC 461
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y++L++ LC + D A +Y L++ R +G +
Sbjct: 462 TPNLVTYNSLVHGLCKSRRFDQA-EYL-----------------LREMTRKQGCSPDIIT 503
Query: 313 LAQKIDKLRKTPLVDRG 329
ID L K+ VDR
Sbjct: 504 YNTVIDGLCKSKRVDRA 520
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 148/297 (49%), Gaps = 6/297 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD FN +ID +CK+ V+ A E+F+ +++ P++ +Y L+ G + +
Sbjct: 427 VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEY 486
Query: 67 VYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ REM + G PD+++Y +I+ C +KR D A +LF +M + P + +I+ L
Sbjct: 487 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 546
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ + EA K GF+P A TY ++ +C + ++ A ++ + G P+
Sbjct: 547 CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDV 606
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T+ I + L K GR +A + + M R G P TY +++ FC ++ + A+ +++
Sbjct: 607 VTFSIFIDWLSKRGRLRQAGELLETMLR-AGLVPDTVTYNTLLKGFCDASRTEDAVDLFE 665
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDD-ACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M+ G P Y+TL+ L + D + + M+D G + +L S L+ ++
Sbjct: 666 VMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASV 722
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 100/194 (51%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G ++ +N +ID LCKS+ V+RA ++F +M PD +Y+I++ + + +
Sbjct: 494 KQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMD 553
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
N V M +GF+P ++YG +I+ C D+A+E+ + + + P F I
Sbjct: 554 EANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFI 613
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L RL +A + + G P+ TYN ++ +C + R DA + + MR+CG
Sbjct: 614 DWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCE 673
Query: 183 PNTRTYDIVLHHLI 196
P+ TY ++ HL+
Sbjct: 674 PDNATYTTLVGHLV 687
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 2/205 (0%)
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+++ GL + S+A+ F + K P++ TYN ++ S R++DA R+++EM
Sbjct: 15 SILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN 73
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN +Y+ VLH KA R E A + ++M + G P V +Y V+ C QVD
Sbjct: 74 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMR-GCPPDVVSYTTVINGLCKLDQVDE 132
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A R+ D+M RG P + Y TL++ C LD A + ++M + G RP ++N+
Sbjct: 133 ACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMH 192
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
L ++A+ L +++++ P
Sbjct: 193 GLCSGRKLDSALQLFKEMEESGSCP 217
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 91/176 (51%), Gaps = 2/176 (1%)
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
++G + A + +++ C + + +DA EM K P++ TY+ +++ L K+ R
Sbjct: 2 NRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDRL 60
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
++A + + M G P V +Y V+ FC +V+ A+ + ++M RG P + Y+T
Sbjct: 61 DDAIRLLEEMVDN-GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+IN LC D++D+AC+ +M+ G +P + L G + AV L +K+
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 175
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K PD F+ ID L K + +A E+ + M + PD +Y LL+G+
Sbjct: 600 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTED 659
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY-DEAVELFREMEATNCK 112
+++ M+ G EPD +Y ++ K Y D E+ + M T K
Sbjct: 660 AVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFK 709
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 151/313 (48%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + + LI+ C HV+ VF K KR F PD+ +T L++G +
Sbjct: 70 GIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELA 129
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +EM G PDVV+ ++ +CS + D+ ++F M + KP + + ING
Sbjct: 130 AGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFING 189
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+++ EA++ F + RG P A TYN ++ A C ++R DA + +M CG+ P+
Sbjct: 190 YCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPD 249
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y +L K G +E +F+ M R+ +P + Y I++ C + +V A +
Sbjct: 250 ILAYSTLLDGFCKQGNLDEMLVLFQEMQRRL-VKPDLVVYTIIINGMCRSRKVKDAKEVL 308
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ G+ P +H Y+ L++ LC E + +A + F++M + G P ++ L Q
Sbjct: 309 SRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQH 368
Query: 305 GMEETAVVLAQKI 317
T V L ++
Sbjct: 369 NDTSTVVQLIHEM 381
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 155/308 (50%), Gaps = 1/308 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+FNRL+ ++ + + E +F +M+ R ++ + +IL+ + ++ V+ +
Sbjct: 42 EFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKT 101
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GF+PDVV + +I+ C + + A L +EM C P +L+ G S+ ++
Sbjct: 102 LKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKI 161
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ + F +G +P+ +Y+ + YC +I++A + DEM G+ PN TY+ +
Sbjct: 162 DKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTL 221
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L +A R +A +F++M G P + Y ++ FC +D + ++ EM+ R
Sbjct: 222 IKALCQALRPRDAQVLFRKMC-ACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRL 280
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
V P + +Y+ +IN +C K+ DA + ++ G++P ++ L L EG A+
Sbjct: 281 VKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEAL 340
Query: 312 VLAQKIDK 319
L +K+++
Sbjct: 341 RLFRKMEE 348
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 1/284 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G K ++ F LID +C+ E A + +M PD+ + L+ G+ Q +
Sbjct: 103 KRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKID 162
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ +++ M G +PDV SY I IN +C ++ DEA+ELF EM P+ + TLI
Sbjct: 163 KVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLI 222
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
L R +A F + G P+ Y+ ++ +C +++ + EM++ +
Sbjct: 223 KALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVK 282
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ Y I+++ + ++ + ++A V R+ + G +P V TY +V C + A+R
Sbjct: 283 PDLVVYTIIINGMCRSRKVKDAKEVLSRLIVE-GLKPDVHTYTALVDGLCREGSIIEALR 341
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ +M+ G +P Y+ L+ + + EM D G
Sbjct: 342 LFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRG 385
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 1 MDKFGLKQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+ + GL +PD N L+ C +++ +++F M + PD+ SY+I + G+ +
Sbjct: 133 LKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCK 192
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + E++ EM G P+ V+Y +I A C A R +A LFR+M A P
Sbjct: 193 VEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILA 252
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TL++G + L E L F + ++R +P+ Y ++ C S ++ DA ++ +
Sbjct: 253 YSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLI 312
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G+ P+ TY ++ L + G EA +F++M + G P +Y ++++ +
Sbjct: 313 VEGLKPDVHTYTALVDGLCREGSIIEALRLFRKME-EDGCMPGSCSYNVLLQGCLQHNDT 371
Query: 238 DMAMRIWDEMKARG 251
+++ EM RG
Sbjct: 372 STVVQLIHEMADRG 385
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 1/252 (0%)
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ M D +P ++ + ++++ K+Y+ V LF+EME K + LIN
Sbjct: 28 FNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCF 87
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+ FG++ KRGF+P+ + ++ C + A ++ EM G P+ T
Sbjct: 88 LHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVT 147
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
+ ++ G+ ++ +F M K G +P V +Y I + +C ++D AM ++DEM
Sbjct: 148 CNSLMRGYCSQGKIDKVRKIFHLMVSK-GLKPDVYSYSIFINGYCKVEKIDEAMELFDEM 206
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
RGV+P Y+TLI +LC + DA F++M G+ P +S L +G
Sbjct: 207 SHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNL 266
Query: 308 ETAVVLAQKIDK 319
+ +VL Q++ +
Sbjct: 267 DEMLVLFQEMQR 278
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ ++ L+D CK +++ +F +M++R PD+ YTI++ G + + +
Sbjct: 245 GLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDA 304
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV + +G +PDV +Y +++ C EA+ LFR+ME C P + L+ G
Sbjct: 305 KEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQG 364
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
S +Q + RGF +A T
Sbjct: 365 CLQHNDTSTVVQLIHEMADRGFYADAVT 392
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI LC++ ER +V +M PDI+ Y +L+G ++ +
Sbjct: 251 MVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGH 310
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +E+ M G +P+VV Y ++ CSA+R+++A EL EM +C F
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNI 370
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ + ++ Q + G P+ TY V+ +C I++A ++ M CG
Sbjct: 371 LVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACG 430
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT +Y IVL L A R +A + +M + G P T+ V+ C V+ A
Sbjct: 431 CRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQ-GCSPNPVTFNTVINFLCKKGLVEQA 489
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +M G P + YST+I+ L K D+A + M++ G+ P ++S++ A
Sbjct: 490 IELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 549
Query: 301 LRDEG 305
L EG
Sbjct: 550 LSKEG 554
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N ++ LC + E+A+E+ +M D ++ IL++ + Q
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGL 380
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M + G PDV++Y +IN C DEAV L + M A C+P+ +
Sbjct: 381 VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTI 440
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL S +R +A Q ++G P T+N V+ C + A ++ +M G
Sbjct: 441 VLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG 500
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+T+EA + M K G P Y + +++
Sbjct: 501 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK-GMSPNTIIYSSIASALSKEGRINRV 559
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D ++ + +Y+ +I+SLC D A ++ M+ G P ++ L +
Sbjct: 560 IQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRG 619
Query: 301 LRDEGMEETA 310
L EG + A
Sbjct: 620 LASEGFVKEA 629
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 114/265 (43%), Gaps = 7/265 (2%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD----GFEPDVVSYG 84
A V + R D+ + ++L Q S++E R ++D G +PDVVSY
Sbjct: 172 AVRVLQDLHGRGCALDVGNCNLVLNAVCDQGG--SVDEALRLLRDLPTSFGCDPDVVSYN 229
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
++ C AKR+ +L EM C P+ F TLI L Q Q
Sbjct: 230 AVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH 289
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+ Y V+ C + A+ ++D M G+ PN Y+ VL L A R E+A
Sbjct: 290 GCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQA 349
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+ M V T+ I+V FC N V + + ++M G +P + Y+T+IN
Sbjct: 350 EELLAEMFDNDCPLDDV-TFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRP 289
C E +D+A + M G RP
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRP 433
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 144/311 (46%), Gaps = 1/311 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
FG ++ +N ++ LC ++ R Q++ ++M + P++ ++ L+ +
Sbjct: 218 SFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFE 277
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+++V +M D G PD+ Y +++ C + A E+ M + KP+ + T++
Sbjct: 278 RVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVL 337
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GL S +R +A + + + T+N +V +C + + ++++M + G
Sbjct: 338 KGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCV 397
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ TY V++ K G +EA + K M+ G P +Y IV++ C + A
Sbjct: 398 PDVITYTTVINGFCKEGLIDEAVMLLKSMA-ACGCRPNTISYTIVLKGLCSAERWVDAED 456
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ +M +G P ++T+IN LC + ++ A + ++ML G P +S + L
Sbjct: 457 LMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLG 516
Query: 303 DEGMEETAVVL 313
G + A+ L
Sbjct: 517 KAGKTDEALEL 527
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 35/249 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + G ++ + +I+ CK ++ A + M P+ SYTI+L+G
Sbjct: 391 MLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAER 450
Query: 55 WGQQKNLLSMN-----------------------------EVYREMKDDGFEPDVVSYGI 85
W ++L+S E+ ++M +G PD++SY
Sbjct: 451 WVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYST 510
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ A + DEA+EL M P+ I+ ++ + L E R++ +Q F +
Sbjct: 511 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVT 570
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+A YNAV+ + C + A + M G PN TY I++ L G +EA
Sbjct: 571 IRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQ 630
Query: 206 SVFKRMSRK 214
+ + K
Sbjct: 631 EMLTELCSK 639
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 103/232 (44%), Gaps = 7/232 (3%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y M++ +C A + A L + P+ + + ++ L + R+++AL + +
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVPV---PPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 143 KRGFEPEAPTYNAVVGAYC---WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI-KA 198
+RG P P Y+ ++ A C A R++ ++ G + ++VL+ + +
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
G +EA + + + G +P V +Y V++ C + + +EM G P +
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
++TLI LC + + +M+D G P ++++ + + EG E A
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVA 314
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 35/168 (20%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I+ LCK VE+A E+ +M PD+ SY+ +++G G+ E+ M
Sbjct: 473 FNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 532
Query: 73 DDGFEP-----------------------------------DVVSYGIMINAHCSAKRYD 97
+ G P D V Y +I++ C D
Sbjct: 533 NKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTD 592
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
A+E M ++ C P+ + LI GL SE + EA + + +G
Sbjct: 593 RAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 161/316 (50%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + ++ LI LC A + M +R+ +PD+ +++ L++ + ++
Sbjct: 77 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 136
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++Y EM +P +V+Y +IN C R DEA ++F M + +C P + T
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 196
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + +RG TYN ++ + + A + EM G
Sbjct: 197 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 256
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +L L K G+ E+A VF+ + R EPT+ TY I++ C +V+
Sbjct: 257 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDG 315
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+T+I+ C + ++A F+EM + G P ++ L +A
Sbjct: 316 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 375
Query: 301 -LRDEGMEETAVVLAQ 315
LRD E +A ++ +
Sbjct: 376 RLRDGDREASAELIKE 391
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 143/276 (51%), Gaps = 1/276 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +L + +++ LCK + A + +KM++ + +P + Y +++G + K++
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G P+VV+Y +I+ C+ R+ +A L +M P F LI+
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + KR +P TY++++ +C R+++A +M + M P+
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ K R EE VF+ MS++ TV TY I+++ DMA I+
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGDCDMAQEIF 249
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
EM + GV P + Y+TL++ LC KL+ A F+
Sbjct: 250 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 285
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 154/311 (49%), Gaps = 13/311 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQKNLLSMNE 66
+N +ID LCK +H++ A +F +M+ + P++ +Y+ L+ W LLS
Sbjct: 54 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS--- 110
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+M + PDV ++ +I+A + EA +L+ EM + PS + +LING
Sbjct: 111 ---DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 167
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL EA Q F + P+ TYN ++ +C R+ + + EM + G+ NT
Sbjct: 168 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 227
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+I++ L +AG + A +FK M G P + TY ++ C N +++ AM +++
Sbjct: 228 TYNILIQGLFQAGDCDMAQEIFKEMV-SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 286
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
++ + P ++ Y+ +I +C K++D F + G++P ++ + +G
Sbjct: 287 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 346
Query: 307 EETAVVLAQKI 317
+E A L +++
Sbjct: 347 KEEADALFKEM 357
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID K + A++++D+M KR DP I +Y+ L+ G+ L +++ M
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 183
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDVV+Y +I C KR +E +E+FREM + + LI GL
Sbjct: 184 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 243
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G P TYN ++ C + ++ A + + +++ + P TY+I++
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 303
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAG+ E+ + +F +S K G +P V Y ++ FC + A ++ EMK G
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
LP Y+TLI + + + + + +EM G + L D ++++
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 419
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 148/295 (50%), Gaps = 1/295 (0%)
Query: 32 VFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHC 91
+ D+M + PD+ +Y +++ G ++ + + +M+ EP V+ Y +I+ C
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
K D+A+ LF+EME +P+ + +LI+ L + R S+A + +R P+
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
T++A++ A+ ++ +A ++ DEM K I P+ TY +++ R +EA +F+ M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
K P V TY +++ FC +V+ M ++ EM RG++ Y+ LI L
Sbjct: 183 VSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
D A + F+EM+ G+ P ++ L L G E A+V+ + + + + P +
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 296
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+D LCK+ +E+A VF+ +++ + +P I +Y I++EG + +
Sbjct: 256 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 315
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + G +PDVV+Y MI+ C +EA LF+EM+ P+ + TLI
Sbjct: 316 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 375
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ + + + + GF +A T V
Sbjct: 376 RLRDGDREASAELIKEMRSCGFAGDASTIGLVT 408
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N +I C+ E A +F +MK+ P+ Y L+ + + +
Sbjct: 326 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 385
Query: 65 NEVYREMKDDGFEPDVVSYGIMIN 88
E+ +EM+ GF D + G++ N
Sbjct: 386 AELIKEMRSCGFAGDASTIGLVTN 409
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 159/308 (51%), Gaps = 5/308 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD +N +++ L KS V+ A ++ D MK + PD+ +YT LL+G G+ L
Sbjct: 700 VPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFN 759
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ +M ++G EPDVV+Y +++ + A+ +FR M C P + +LI+ LG
Sbjct: 760 MFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLG 819
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
E R+ EA FF S +G P Y++++ ++ ++ A + +EM++ PN
Sbjct: 820 KEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIV 879
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ +L L KAGR A + + M K G P + TY I++ VD A +
Sbjct: 880 TYNNLLSGLAKAGRLNVAEKLLEEM-EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKR 938
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG- 305
MK +G++P + +++LI SL DKL +AC+ F M + G P ++ L L G
Sbjct: 939 MKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGK 998
Query: 306 MEETAVVL 313
+ E A++
Sbjct: 999 VHEAAMIF 1006
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 152/310 (49%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ ++ +I+ LCKS V++A +VF +MK+ +P + +Y LL + +
Sbjct: 624 MVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK 683
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ E+++ PD Y IM+N + R DEA +L M+ N P + +
Sbjct: 684 IDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTS 743
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GLG RL EA F + + G EP+ Y +++ +++ A + M K
Sbjct: 744 LLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR 803
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY ++ L K GR EEAY F+ S G P V Y ++ F VD A
Sbjct: 804 CVPDVVTYSSLIDSLGKEGRVEEAYYFFEN-SISKGCTPNVGVYSSLIDSFGKKGMVDRA 862
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +++EM+ R P + Y+ L++ L +L+ A K +EM +G P ++ L
Sbjct: 863 LELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDG 922
Query: 301 LRDEGMEETA 310
+ GM + A
Sbjct: 923 VGKMGMVDEA 932
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 4/295 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L+D L KS +E A +F KM + +PD+ +YT L++ G+ L
Sbjct: 735 LPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALI 794
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++R M PDVV+Y +I++ R +EA F + C P+ ++ +LI+ G
Sbjct: 795 IFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFG 854
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ + AL+ F + ++R P TYN ++ + R+N A ++++EM K G P+
Sbjct: 855 KKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLV 914
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+I++ + K G +EA S FKRM K G P V T+ ++ ++ A ++D
Sbjct: 915 TYNILIDGVGKMGMVDEAESYFKRMKEK-GIVPDVITFTSLIESLGKVDKLLEACELFDS 973
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M+ G P + Y+ LI+ L K+ +A F EM G P G +K+ L
Sbjct: 974 MEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRIL 1028
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 168/347 (48%), Gaps = 37/347 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+ + HV+ A ++ + MKK P + +YT L++G G+ L + REM+
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP VV+Y ++ + + +E++ LF EM C + +IN L +
Sbjct: 591 KQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVD 650
Query: 133 EALQFFGQSKKRGFE-----------------------------------PEAPTYNAVV 157
+AL FG+ K+ G E P+ YN +V
Sbjct: 651 QALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMV 710
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
S R+++A +++D M+ I P+ TY +L L K+GR EEA+++F +M+ + G
Sbjct: 711 NGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEE-GH 769
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
EP V Y ++ + ++ A+ I+ M + +P + YS+LI+SL E ++++A
Sbjct: 770 EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYY 829
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+F+ + G P ++S+L + +GM + A+ L +++ + R+ P
Sbjct: 830 FFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR-RQCP 875
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 32/357 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FG +N +++ L K A VF K+ + R PD +++ I + + +
Sbjct: 243 MKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGR 302
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E +EM G +P V ++ ++I+A + DEA + F M+ C P+ + T
Sbjct: 303 LDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTT 362
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL RL EA + F + K+ P+A YN ++ + + A + EM+ G
Sbjct: 363 LVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRG 422
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN RTY+I++ L KAGR EA+ +F + ++ G P V TY ++ + Q+D
Sbjct: 423 LVPNLRTYNIMISVLGKAGRQPEAWQLFHDL-KEQGAVPDVFTYNTLIDVLGKGGQMDKV 481
Query: 241 MRIWDEMKARGVLPVMH-------------------------------MYSTLINSLCHE 269
+ I EM +G ++ Y+TL+++ H
Sbjct: 482 LAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHN 541
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+D+A K + M P ++ L L G + AV L ++++K P V
Sbjct: 542 GHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSV 598
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 169/351 (48%), Gaps = 32/351 (9%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL L +N +I L K+ A ++F +K++ PD+ +Y L++ G+ + +
Sbjct: 422 GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKV 481
Query: 65 NEVYREMKDDGFE------------------------PDV-------VSYGIMINAHCSA 93
+ +EM + G E P + ++Y +++A
Sbjct: 482 LAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHN 541
Query: 94 KRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
DEAV+L M+ C P+ + TL++GLG RL EA+ + +K+G EP TY
Sbjct: 542 GHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTY 601
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
++++ ++ + ++ + DEM + G + TY +V++ L K+ ++A VF RM +
Sbjct: 602 SSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRM-K 660
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
+ G EP + Y+ ++ + ++D A++I++E++ ++P +Y+ ++N L +++D
Sbjct: 661 EEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVD 720
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ACK M + I P +++L L G E A + K+ + P
Sbjct: 721 EACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEP 771
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 132/278 (47%), Gaps = 1/278 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+Y L+ + ++ ++ MK P VV+Y +++ A R DEAV L REM
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
E C+PS + +L+ + E+L F + ++G + TY+ V+ C S +
Sbjct: 590 EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+ A + M++ G+ P Y +L L+K + + A +F + ++ P Y I
Sbjct: 650 DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL-QESSLVPDTFVYNI 708
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+V + +VD A ++ D MK + +LP + Y++L++ L +L++A F +M + G
Sbjct: 709 MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P +++L L G A+++ + + K R P
Sbjct: 769 HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVP 806
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ + L+D L K + A +F M K+R PD+ +Y+ L++ G++
Sbjct: 764 MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + G P+V Y +I++ D A+ELF EM+ C P+ +
Sbjct: 824 VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL RL+ A + + +K G P+ TYN ++ +++A M++ G
Sbjct: 884 LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ T+ ++ L K + EA +F M + G P+V TY +++ + +V A
Sbjct: 944 IVPDVITFTSLIESLGKVDKLLEACELFDSMEEE-GYNPSVVTYNVLIDILGRAGKVHEA 1002
Query: 241 MRIWDEMKARGVLP 254
I+ EMK +G +P
Sbjct: 1003 AMIFHEMKVKGCMP 1016
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +I L ++ + ++ M K + T LL +G N+
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ +MK G P Y ++ Y AV +F ++ +P F ++
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
RL A + + K G +P T+ ++ A S I++A + + M+ PN
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ L KAGR EEA VF M ++ P Y ++ + DMA ++
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEM-KENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EMK RG++P + Y+ +I+ L + +A + F ++ + G P ++ L L
Sbjct: 416 KEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKG 475
Query: 305 G-MEETAVVLAQKIDK 319
G M++ ++ + ++K
Sbjct: 476 GQMDKVLAIIKEMVEK 491
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 1/246 (0%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ DG+ V +Y +MI A+ D V++ M + S H+ +L+ GS +
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
S AL+ F Q K G P YN V+ + A + ++ + I P+ +T+ I
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H ++GR + A + M K G +P V T+ +++ + +D A + ++ MK
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMI-KSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+TL+N L +L++AC+ F EM + P ++ L L G + A
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412
Query: 312 VLAQKI 317
L +++
Sbjct: 413 GLFKEM 418
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ F LI++L K + A E+FD M++ ++P + +Y +L++ G+
Sbjct: 939 MKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGK 998
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIM 86
+ ++ EMK G PD ++ GIM
Sbjct: 999 VHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 54/121 (44%)
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A F ++ G TV TY ++++ + D ++I M G MH+ ++L+
Sbjct: 165 AKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLL 224
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
+ + + A + F +M G P +++ + + L G +AV++ K+ + R
Sbjct: 225 RTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQ 284
Query: 324 P 324
P
Sbjct: 285 P 285
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 160/322 (49%), Gaps = 1/322 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N +ID LCK++ V+RA+ V M + PD+ +Y +++G + + +
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 323
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ V + M D +PD+ +Y +I+ + S + E V EM A P + L++
Sbjct: 324 DGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDY 383
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +EA + F ++G +P Y ++ Y I D ++D M GI PN
Sbjct: 384 LCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPN 443
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++IVL K +EA +F RMS+ G P V TY I++ C +VD A+ +
Sbjct: 444 NYIFNIVLCAYAKKAMIDEAMHIFSRMSQH-GLSPDVVTYGILIDALCKLGRVDDAVLKF 502
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++M GV P ++++L+ LC D+ + A + F EM D G+RP F+ + L +E
Sbjct: 503 NQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNE 562
Query: 305 GMEETAVVLAQKIDKLRKTPLV 326
G A L ++++ P V
Sbjct: 563 GQVMVAQRLIDSMERVGVRPNV 584
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 148/297 (49%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ ++ +ID LCK++ V+RA+ V M + PD+ +Y +++G + + +
Sbjct: 229 GVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 288
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V + M D G +PDVV+Y +I+ C A+ D A + + M + KP + LI+G
Sbjct: 289 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHG 348
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
S E ++ + RG +P+ TY+ ++ C + + +A ++ M + GI PN
Sbjct: 349 YLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPN 408
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y I+LH G + + M G P + IV+ + A +D AM I+
Sbjct: 409 VTIYGILLHGYAARGAIADLTDLLDLMVAN-GISPNNYIFNIVLCAYAKKAMIDEAMHIF 467
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M G+ P + Y LI++LC ++DDA F +M++ G+ P +F++L L
Sbjct: 468 SRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGL 524
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 149/317 (47%), Gaps = 36/317 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ ++ L+D LCK+ A+++F M ++ P++ Y ILL G+ + + +
Sbjct: 369 GLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADL 428
Query: 65 NE-----------------------------------VYREMKDDGFEPDVVSYGIMINA 89
+ ++ M G PDVV+YGI+I+A
Sbjct: 429 TDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDA 488
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C R D+AV F +M P+ +F +L+ GL + R +A + F + +G P
Sbjct: 489 LCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPN 548
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+N ++ C ++ A R++D M + G+ PN +Y+ ++ AGRT+EA +
Sbjct: 549 VVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLD 608
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M G +P + +Y+ ++R +C ++D A ++ EM +GV P YST++ L H
Sbjct: 609 VMV-SVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHT 667
Query: 270 DKLDDACKYFQEMLDIG 286
+ +A + + M+ G
Sbjct: 668 RRFSEAKELYLNMIKSG 684
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 42/358 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G+K ++ +N +ID LCK++ V+RA V M + PDI++Y L+ G+ G+ K +
Sbjct: 299 GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEV 358
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ E EM G +PDVV+Y ++++ C + EA ++F M KP+ I+ L
Sbjct: 359 VRRLE---EMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGIL 415
Query: 122 INGLGSEKRLS-----------------------------------EALQFFGQSKKRGF 146
++G + ++ EA+ F + + G
Sbjct: 416 LHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGL 475
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P+ TY ++ A C R++DA ++M G+ PN+ ++ +++ L R E+A
Sbjct: 476 SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEE 535
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+F M + G P V + ++ C QV +A R+ D M+ GV P + Y+TLI
Sbjct: 536 LFFEMWDQ-GVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGH 594
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
C + D+A + M+ +G++P + L + G + A L +++ + TP
Sbjct: 595 CLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTP 652
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 144/308 (46%), Gaps = 1/308 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ LC E+A+E+F +M + P++ + ++ + ++ + M+
Sbjct: 517 FNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSME 576
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V+SY +I HC A R DEA +L M + KP + TL+ G R+
Sbjct: 577 RVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRID 636
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A F + ++G P A TY+ ++ + R ++A + M K G + TY+I+L
Sbjct: 637 NAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIIL 696
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K +EA+ +F+ + K P + T+ I++ + + AM ++ + + G+
Sbjct: 697 NGLCKTNCVDEAFKIFQSLCSKD-LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P + Y ++ ++ E LD+ F M G P + + + ++L G A
Sbjct: 756 VPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGA 815
Query: 313 LAQKIDKL 320
KID++
Sbjct: 816 YLSKIDEM 823
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 141/339 (41%), Gaps = 40/339 (11%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL-LSM 64
++ +L ++ L C+ +E F + K + + LL G K + +M
Sbjct: 86 VRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAM 145
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME---ATNCKPSPHIFCTL 121
+ + R M + G P+VVS ++ C+ KR +EA+EL M NC P+ + T+
Sbjct: 146 DILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTI 205
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL + + A +G + + TY+ ++ C + ++ A ++ M G+
Sbjct: 206 IDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGV 265
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA- 240
P+ TY+ ++ L KA + A V + M K G +P V TY ++ C VD A
Sbjct: 266 KPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK-GVKPDVVTYNTIIDGLCKAQAVDRAD 324
Query: 241 ----------------------------------MRIWDEMKARGVLPVMHMYSTLINSL 266
+R +EM ARG+ P + YS L++ L
Sbjct: 325 GVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYL 384
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C K +A K F M+ GI+P ++ L G
Sbjct: 385 CKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARG 423
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G++ + +N LI C + + A ++ D M PD+ SY LL G+ +
Sbjct: 575 MERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGR 634
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++REM G P V+Y ++ +R+ EA EL+ M + + + +
Sbjct: 635 IDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNI 694
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + EA + F + P T+ ++ R DA + + G
Sbjct: 695 ILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG 754
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ PN TY I++ ++I+ G +E ++F M K G P ++R
Sbjct: 755 LVPNVVTYCIMMKNIIQEGLLDEFDNLFLAM-EKSGCTPDSVMLNAIIR 802
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 100/252 (39%), Gaps = 26/252 (10%)
Query: 85 IMINAHCSAKRYDEAVELFREME---ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
++ A CS+ + AV LF M + +P + L R+ FG
Sbjct: 58 VVARARCSSTS-ELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLI 116
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYR-MMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
K G+ N ++ C + R+++A ++ M + G PN + + +L L R
Sbjct: 117 LKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKR 176
Query: 201 TEEAYSVFKRMSRKPG--TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
EEA + M+ G P V TY ++ C VD A + M +GV +
Sbjct: 177 VEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVT 236
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
YST+I+ LC +D A Q M+D G++P ++ + ID
Sbjct: 237 YSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTI-------------------ID 277
Query: 319 KLRKTPLVDRGQ 330
L K VDR +
Sbjct: 278 GLCKAQAVDRAE 289
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 6/163 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M K G + ++ +N +++ LCK+ V+ A ++F + + P+I ++TI+++ G+
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+K+ + +++ + G P+VV+Y IM+ DE LF ME + C P +
Sbjct: 740 KKDAM---DLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVM 796
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
+I L + A + + + F EA T + ++ +
Sbjct: 797 LNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLF 839
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 156/313 (49%), Gaps = 5/313 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G Q+L FN ++D LCKS+ VE+A E+F ++ R F D +Y ++L GW K
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 210
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
EV +EM + G P++ +Y M+ A + A E F EM+ +C+ + T
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++G G + A F + + G P TYNA++ C + +A M +EM + G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY++++ L AG + +RM + G EP TY +++R + ++V+ A
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE-GCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFSNL 297
+ ++++M + LP + Y+ LI+ + + +D A K EM++ G P F+ +
Sbjct: 390 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRV 449
Query: 298 KQALRDEGMEETA 310
L G + A
Sbjct: 450 LNGLLLTGNQAFA 462
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 2/228 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P ++ I+ + SA + D+AV+LF M C F T+++ L KR+ +A +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + R F + TYN ++ +C R A ++ EM + GI PN TY+ +L +
Sbjct: 184 FRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
AG+ A+ F M +K E V TY VV F ++ A ++DEM GVLP +
Sbjct: 243 AGQIRHAWEFFLEM-KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y+ +I LC +D +++A F+EM+ G P ++ L + L G
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 2/306 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
F+ ID + + +M+ R P K++ I+ E + +++ M
Sbjct: 93 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G D+ S+ +++ C +KR ++A ELFR + + + ++NG KR
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLIKRT 211
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+AL+ + +RG P TYN ++ + + +I A+ EM+K + TY V
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H AG + A +VF M R+ G P+V+TY ++++ C V+ A+ +++EM RG
Sbjct: 272 VHGFGVAGEIKRARNVFDEMIRE-GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+ LI L H + + Q M + G P Q ++ + + + E A+
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 390
Query: 312 VLAQKI 317
L +K+
Sbjct: 391 GLFEKM 396
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 15/322 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L +N +I C S A+++ +M +R+ PD+ +Y L+ + ++
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y EM G P+ ++Y MI+ C R D A ++F M C P F T
Sbjct: 341 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G KR+ + ++ + +RG TYN ++ +C +N A + +M G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRM 230
+ P+ T + +L L G+ ++A +FK M + G EP V TY I++
Sbjct: 461 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 520
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A +++EM RG++P YS++I+ LC + +LD+A + F M P
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 580
Query: 291 GQLFSNL-----KQALRDEGME 307
F+ L K D+G+E
Sbjct: 581 VVTFNTLINGYCKAGRVDDGLE 602
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 151/308 (49%), Gaps = 2/308 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L++ LC+ + A + D+M + P +Y +++G ++ + +S + R+M+
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKME 246
Query: 73 D-DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ P+VV Y +I++ C R+ +A LF EM+ P + ++I G S R
Sbjct: 247 EVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRW 306
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
S+A Q + +R P+ TYNA++ A+ + +A + DEM GI PNT TY+ +
Sbjct: 307 SDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 366
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ K R + A +F M+ K G P V T+ ++ +C ++D M + EM RG
Sbjct: 367 IDGFCKQDRLDAAEDMFYLMATK-GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 425
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
++ Y+TLI+ C L+ A Q+M+ G+ P + L L D G + A+
Sbjct: 426 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 485
Query: 312 VLAQKIDK 319
+ + + K
Sbjct: 486 EMFKAMQK 493
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 12/316 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID CK ++ A+++F M + PD+ ++T L++G+ K + E+ EM
Sbjct: 363 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 422
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + V+Y +I+ C + A++L ++M ++ P TL++GL +L
Sbjct: 423 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 482
Query: 133 EALQFFGQSKK-----------RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+AL+ F +K G EP+ TYN ++ + +A + +EM GI
Sbjct: 483 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 542
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+T TY ++ L K R +EA +F M K + P V T+ ++ +C +VD +
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS-PNVVTFNTLINGYCKAGRVDDGL 601
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ EM RG++ +Y TLI ++ A FQEM+ G+ P N+
Sbjct: 602 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 661
Query: 302 RDEGMEETAVVLAQKI 317
+ E AV + + +
Sbjct: 662 WSKEELERAVAMLEDL 677
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK- 59
M++ ++ ++ FN LI C + A F K+ K PD+ ++T LL G +
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164
Query: 60 ------------------NLLS----MNEVYRE------------MKDDGFEPDVVSYGI 85
N+++ MN + RE M +DG +P ++YG
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 86 MINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
+++ C A+ L R+M E ++ P+ I+ +I+ L + R S+A F + +++
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+ TYN+++ +C S R +DA +++ EM + I P+ TY+ +++ +K G+ EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
++ M + G P TY ++ FC ++D A ++ M +G P + ++TLI+
Sbjct: 345 AELYDEMLPR-GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
C ++DD + EM G+ ++ L G A+ L+Q++
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 456
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ +E A ++F M + R P + + L+ + + + +Y++M+ D+ S+
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+I CS + A+ F ++ P F TL++GL E R+SEAL FF Q +
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P T+ ++ C RI +A ++D M + G+ P TY ++ + K G T
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++ ++M P V Y ++ C + + A ++ EM+ +G+ P + Y+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C + DA + QEML+ I P ++ L A EG
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 13/313 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLS 63
GL+ + ++D +CK A + KM++ P++ Y+ +++ +
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM++ G PD+ +Y MI CS+ R+ +A +L +EM P + LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E + EA + + + RG P TYN+++ +C R++ A M M G P
Sbjct: 334 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 393
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ T+ ++ A R ++ + M R+ TV TY ++ FC ++ A+ +
Sbjct: 394 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV-TYNTLIHGFCLVGDLNAALDL 452
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM----LDI-------GIRPPGQ 292
+M + GV P + +TL++ LC KL DA + F+ M +D+ G+ P
Sbjct: 453 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVL 512
Query: 293 LFSNLKQALRDEG 305
++ L L +EG
Sbjct: 513 TYNILICGLINEG 525
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 11/223 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-----------PDIKSYTILLE 53
G+ ++ N L+D LC + ++ A E+F M+K + D PD+ +Y IL+
Sbjct: 460 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 519
Query: 54 GWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
G + L E+Y EM G PD ++Y MI+ C R DEA ++F M + + P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 579
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ F TLING R+ + L+ F + +RG +A Y ++ + IN A +
Sbjct: 580 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIF 639
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
EM G+ P+T T +L E A ++ + + G
Sbjct: 640 QEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVG 682
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 2/275 (0%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
L G+ + K L +++ +M P VV + ++ +R D + L+++ME
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
+ + F LI S +L AL FG+ K G P+ T+ ++ C R+++A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+M + PN T+ +++ L + GR EA ++ RM + G +PT TY +V
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MEDGLQPTQITYGTIVDG 228
Query: 231 FCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C A+ + +M + ++P + +YS +I+SLC + + DA F EM + GI P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++++ G A L Q++ + + +P
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 154/295 (52%), Gaps = 1/295 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I +C+ V++A E+ ++M + PD ++ IL++G + + +EV R ++
Sbjct: 85 FNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQ 144
Query: 73 DDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
DG P+VV++ +I+ +C A + ++A+ ++ +M A+ P+ + LING G L
Sbjct: 145 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 204
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A++ + Q + P+ T+++++ YC +++DA R+ +M + I PN T+ I+
Sbjct: 205 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 264
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H L K R++EA + ++ +P P Y V+ + C +VD A I M+ +G
Sbjct: 265 IHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 324
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
P + Y+ LI C + ++ +A +F EM++ G P + L GM
Sbjct: 325 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 379
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 128/256 (50%), Gaps = 3/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQK 59
M++FG + N L+D LC++ V R EV ++++ P++ ++T ++ G+ +
Sbjct: 108 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 167
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L VY +M G P+ V+Y ++IN + AVE++++M C P F
Sbjct: 168 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 227
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-K 178
+LI+G +L +AL+ + + +P T++ ++ + C R ++A +++E+ +
Sbjct: 228 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 287
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P Y+ V+ L K G+ +EA + K M K G P TY I++ +C +++
Sbjct: 288 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK-GCRPDKYTYTILIIGYCMKSRIS 346
Query: 239 MAMRIWDEMKARGVLP 254
A+ + EM G P
Sbjct: 347 EAIMFFHEMVEAGCSP 362
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 115/253 (45%), Gaps = 1/253 (0%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G+ PD ++++ A D + L + C+ + + L++ L R+ +
Sbjct: 6 GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65
Query: 135 LQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ F + + R + P+ ++N V+ C ++ A +++ M + G P+T T++I++
Sbjct: 66 VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVD 125
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L + + V +R+ R P V T+ V+ +C +++ AM ++++M A G++
Sbjct: 126 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 185
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P Y+ LIN L A + +Q+M + P FS+L G + A+ +
Sbjct: 186 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 245
Query: 314 AQKIDKLRKTPLV 326
+ + R P V
Sbjct: 246 WSDMAQHRIQPNV 258
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ +N LI+ K + A EV+ +M + R PD+ +++ L++G+ +
Sbjct: 179 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 238
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFC 119
L ++ +M +P+V ++ I+I++ C R DEA+ L E+ + P I+
Sbjct: 239 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYN 298
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L ++ EA +++G P+ TY ++ YC RI++A EM +
Sbjct: 299 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 358
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
G P++ T + + L+KAG E V + S
Sbjct: 359 GCSPDSITVNCFISCLLKAGMPNEVDHVMRLAS 391
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 165/326 (50%), Gaps = 11/326 (3%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ Q+LP FN L+D L KSRH +A + +++ RF PD+ +Y L +GW + K+
Sbjct: 161 VAQDLPLFNSLLDALSKSRHAGKAASLVRALEQ-RFTPDVVTYNTLADGWCRVKDTSRAL 219
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-----TNCKPSPHIFCT 120
+V R M + G P +Y I++ A + A + F +M+ +CKP + T
Sbjct: 220 DVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTT 279
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GLG +L +A + F + K G P TYNA++ C + DA + D MR G
Sbjct: 280 MVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKG 339
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY +++ L AG+ + + +RM + G EP V TY +++R +++
Sbjct: 340 YVPNVVTYTVLIRGLCHAGKIDRGLKLLERM-KNGGCEPIVQTYNVLIRYLFEEGEMEKG 398
Query: 241 MRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFSN 296
+ ++++M K LP Y+ +I+++ + +D A + +EM+D G P +F+
Sbjct: 399 LDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMVDRGYLPRRFMFNR 458
Query: 297 LKQALRDEGMEETAVVLAQKIDKLRK 322
+ L G +E + L + +K R+
Sbjct: 459 VLNGLMLTGNQELSRKLLRMQEKYRR 484
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 12/243 (4%)
Query: 92 SAKRYDEAVELFREMEATN-CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
S +R D AV LF + ++ +F +L++ L + +A ++R F P+
Sbjct: 141 SQRRPDLAVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQR-FTPDV 199
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMR---KCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
TYN + +C R+ D R +D +R + GI P TY+I+L +AG+ A+
Sbjct: 200 VTYNTLADGWC---RVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDF 256
Query: 208 F----KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
F KR S+ +P V +Y +V Q++ A +++DEM G P + Y+ LI
Sbjct: 257 FLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALI 316
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
+C + ++DA F M G P ++ L + L G + + L +++
Sbjct: 317 QVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCE 376
Query: 324 PLV 326
P+V
Sbjct: 377 PIV 379
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N LI +CK +VE A VFD M+ + + P++ +YT+L+ G
Sbjct: 300 MAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGK 359
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
+ ++ MK+ G EP V +Y ++I ++ ++LF +M + C P+ +
Sbjct: 360 IDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYN 419
Query: 120 TLINGLGSEKRLSE---ALQFFGQSKKRGFEPEAPTYNAVVGAYCWS---------MRIN 167
+I+ + KR + A + + RG+ P +N V+ + +R+
Sbjct: 420 IIISAMFMRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRKLLRMQ 479
Query: 168 DAYRMM 173
+ YR +
Sbjct: 480 EKYRRL 485
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 163/324 (50%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ ++ +N LI L ++ + + M R F PD ++TIL++G ++
Sbjct: 207 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 266
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M G EPD+++Y ++N C + ++A +LF + K + +
Sbjct: 267 VGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 326
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING ++++ EA + F + + +G +P TYN ++GA C S R+ A ++ EM+ CG
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TY ++L L K G EEA +F+ + +K +P + + I++ C +++ A
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSI-KKTEHKPNIEVFSILLDGMCRAGKLEEA 445
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +DE+ G+ P Y+ LIN LC++ L +A K +M + G P F+ + Q
Sbjct: 446 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 505
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L E A+ L +++ +P
Sbjct: 506 LLKENEIHEAIQLLEEMRNRNFSP 529
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 162/327 (49%), Gaps = 2/327 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LI+ LCK+R A ++ +KMK D+ +Y ++++ +
Sbjct: 103 MTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGM 161
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ EM G PDVV Y +++ C R EA+E F+EME + + +
Sbjct: 162 TTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNS 221
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL E F RGF P+A T+ ++ C ++ +A ++++ M G
Sbjct: 222 LIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKG 281
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ +++ L G+ E+A +F+ ++ + G + V +Y I++ +C + ++D A
Sbjct: 282 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADR-GIKLNVFSYNILINGYCKDQKIDEA 340
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+++EM+ +G+ P Y+TLI +LC ++ A K F EM G + L
Sbjct: 341 FRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDG 400
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L G E A+ L Q I K P ++
Sbjct: 401 LCKNGHLEEAIDLFQSIKKTEHKPNIE 427
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 164/348 (47%), Gaps = 36/348 (10%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K ++ + +ID+LCK A ++F +M PD+ Y+ L++G + L E
Sbjct: 143 KGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 202
Query: 67 VYREMK-----------------------------------DDGFEPDVVSYGIMINAHC 91
++EM+ D GF PD ++ I+I+ C
Sbjct: 203 FFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLC 262
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
+ EA ++ M +P + TL+NGL +L +A + F RG +
Sbjct: 263 KEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF 322
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+YN ++ YC +I++A+R+ +EMR G+ P+T TY+ ++ L ++GR A +F M
Sbjct: 323 SYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 382
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ G +STY +++ C N ++ A+ ++ +K P + ++S L++ +C K
Sbjct: 383 -QTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
L++A K F E+ G+ P ++ L L ++GM AV L ++++
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEE 489
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 42/343 (12%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+K G K L F L R V VF KR F+PD + T L++G + +
Sbjct: 41 EKIGTKASLSPFESL-------RAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGI 93
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD------------------------ 97
+++ EM + G D +YGI+IN C A++
Sbjct: 94 PDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMII 153
Query: 98 ----------EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
EA+++F EM P ++ +L++GL RL EAL+FF + + RG
Sbjct: 154 DSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
+ TYN+++ + + ++ M G P+ T+ I++ L K G+ EA +
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 273
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+ M K G EP + TY ++ C Q++ A ++++ + RG+ + Y+ LIN C
Sbjct: 274 LELMHHK-GKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC 332
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ K+D+A + F+EM G++P ++ L AL G TA
Sbjct: 333 KDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTA 375
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L + L+D LCK+ H+E A ++F +KK P+I+ ++ILL+G + L + +
Sbjct: 390 KLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQF 449
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
E+ +G EPD ++Y I+IN C+ EAV+L +ME C P F +I L E
Sbjct: 450 DEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKE 509
Query: 129 KRLSEALQFFGQSKKRGFEPE 149
+ EA+Q + + R F P+
Sbjct: 510 NEIHEAIQLLEEMRNRNFSPD 530
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 101/188 (53%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +N LI LC+S V AQ++F +M+ + +Y +LL+G + +L
Sbjct: 351 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 410
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++ +K +P++ + I+++ C A + +EA + F E+ +P + LING
Sbjct: 411 IDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILING 470
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ LSEA++ Q +++G P++ T+N ++ I++A ++++EMR P+
Sbjct: 471 LCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530
Query: 185 TRTYDIVL 192
++L
Sbjct: 531 EAVTSMLL 538
>gi|15239018|ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g11310, mitochondrial; Flags: Precursor
gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis thaliana]
gi|110738090|dbj|BAF00978.1| hypothetical protein [Arabidopsis thaliana]
gi|332004275|gb|AED91658.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 159/308 (51%), Gaps = 4/308 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMK---KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
L+D LCK HV A +++ + P ++ + ILL GW + + L +++ EMK
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMK 277
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+P VV+YG +I +C +R A+E+ EM+ + + +F +I+GLG RLS
Sbjct: 278 AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLS 337
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL + P TYN++V +C + + A +++ M G+ P T TY+
Sbjct: 338 EALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFF 397
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K +TEE +++ ++ + G P TY ++++M C + ++ +AM++ EMK RG+
Sbjct: 398 KYFSKHNKTEEGMNLYFKLI-EAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + + LI+ LC + L++A + F + GI P F + LR +GM + A
Sbjct: 457 DPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKR 516
Query: 313 LAQKIDKL 320
L+ + L
Sbjct: 517 LSSLMSSL 524
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 93/212 (43%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID L ++ + A + ++ P I +Y L++ + + +L +++ + M
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P +Y + +E + L+ ++ P + ++ L + +LS
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+Q + K RG +P+ T ++ C + +A+ D + GI P T+ ++
Sbjct: 443 LAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMID 502
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+ L G ++ A + MS P ++ +TY
Sbjct: 503 NGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTY 534
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 106/248 (42%), Gaps = 14/248 (5%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
D+ + + LLE +++ + + + + G EP V + + S+ +V +
Sbjct: 69 DLSTISNLLE----NTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKW 124
Query: 104 REMEATNCKPSPHIFCTLINGL--GSEKRLSEALQFFGQSKKRGFE-PEAPTYNAVVGAY 160
EM+ SP +F +++N L E ++ +L F G A T+ ++ Y
Sbjct: 125 AEMKP-GFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRY 183
Query: 161 CWSMRINDAYRMMDEMRK----CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ + A R + R C R +++L L K G EA +R+
Sbjct: 184 ARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMD 243
Query: 217 TE--PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
+ P+V + I++ + + ++ A ++W+EMKA V P + Y TLI C ++
Sbjct: 244 SNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQI 303
Query: 275 ACKYFQEM 282
A + +EM
Sbjct: 304 AMEVLEEM 311
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 6/145 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +N K E ++ K+ + PD +Y ++L+ + L
Sbjct: 385 GVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLA 444
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V +EMK+ G +PD+++ ++I+ C + +EA E F P F + NG
Sbjct: 445 MQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNG 504
Query: 125 LGSE------KRLSEALQFFGQSKK 143
L S+ KRLS + SKK
Sbjct: 505 LRSKGMSDMAKRLSSLMSSLPHSKK 529
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 146/298 (48%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++ CK + A+EV +M++R +P + +T LL + + +V EM
Sbjct: 506 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV+ Y +I+ S R EA +F M C P + T+I +
Sbjct: 566 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 625
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + K G P+ YN+++ Y R++ A+ + D M GI PN T+++++
Sbjct: 626 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 685
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K G+T+ A+S+FK M K PT+ +Y I++ +V A + EM RG+
Sbjct: 686 HGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGI 745
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+P H Y++LI SL ++ +A K ++M+ +G+ P Q +S L L D M +TA
Sbjct: 746 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 803
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 151/310 (48%), Gaps = 7/310 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +G K + +I L ++ +E A+ FD+ D+ SYT +++G K
Sbjct: 325 LSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKR 378
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ ++K G P+VV+Y +I+ A R ++ ++ F +M ++C P+ +
Sbjct: 379 IDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTV 438
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + L +A + F Q ++G P+ TY ++ + + ++++A +++D M G
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 498
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY ++H K EA V +M R+ G EP + + ++ + + + A
Sbjct: 499 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQM-RERGCEPGLFIFTSLLSYYLSKGRAEEA 557
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM ARG P + +Y++LI+ L ++ +A F M++ G P + + Q
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 617
Query: 301 LRDEGMEETA 310
G E A
Sbjct: 618 FSKIGNVEAA 627
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 130/258 (50%), Gaps = 2/258 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+E A + +M PD+ + I+L G + + + E++ EM G EP +VSY
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ S + DEA + F M C+P F TLI+G + Q+ KR
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F P+ Y +V+ YC + ++ +++++EM G P+ Y +++ L K GR +EAY
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+RM RK G T+ ++ + ++D A ++ EM RG P + + +LI +
Sbjct: 180 ELFERM-RKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238
Query: 266 LCHEDKLDDACKYFQEML 283
LC K+D+A + +Q ++
Sbjct: 239 LCKAGKVDEANEIYQTVV 256
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 132/258 (51%), Gaps = 7/258 (2%)
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+EM G PDVV+ I++N C A++ D+A+ELF EM + C+P+ + T+I+GL S
Sbjct: 9 KEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASI 68
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ EA +FF G EP+ + ++ +C + + + ++++ K P+ Y
Sbjct: 69 DKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-RFRPDVFLY 127
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
V+H KAG + + + + M G P + Y +++ C +VD A +++ M+
Sbjct: 128 TSVIHGYCKAGDLDTGFKILEEM-LAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMR 186
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP-----PGQLFSNLKQALRD 303
G L + TLI +L + KLD+AC+ ++EM++ G P +F+ K D
Sbjct: 187 KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVD 246
Query: 304 EGMEETAVVLAQKIDKLR 321
E E V+A+K+ R
Sbjct: 247 EANEIYQTVVAKKVATSR 264
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 149/320 (46%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +ID L K+ +E + F+ M P +YT++++G + + L
Sbjct: 393 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 452
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V+ +M G PD ++Y +I+ A + DEA +L M +P+ + ++++G
Sbjct: 453 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 512
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++EA + Q ++RG EP + +++ Y R +AY+++ EM G P+
Sbjct: 513 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 572
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ L GR EA VF M K G P TY +++ F V+ A I
Sbjct: 573 VILYTSLIDLLFSTGRVPEARHVFDSMIEK-GCAPDALTYGTIIQNFSKIGNVEAAGEIL 631
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M GV P Y++L++ +++D A + M+ GI+P F+ L L +
Sbjct: 632 ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 691
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G + A L +++ + + P
Sbjct: 692 GKTDRAFSLFKEMLEKDEVP 711
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 150/344 (43%), Gaps = 41/344 (11%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + LID LCK V+ A E+F++M+K D ++ L+E L E
Sbjct: 156 IPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACE 215
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+YREM + G+EP + +I A C A + DEA E+++ + A S + +L++G
Sbjct: 216 LYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYC 275
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ + L+ Q + P+ TYN +V + + R++DA + + G PN
Sbjct: 276 KLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAA 335
Query: 187 TYDIVLHHLIKAGRTEEAYSVF-------------------KRMS---------RKPGTE 218
TY ++ L A R EEA + F KR+ + G
Sbjct: 336 TYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCS 395
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V Y V+ +++ ++ +++M +P Y+ +I+ LC L DACK
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV 455
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
F++M+ G P ++ L A K+D+ RK
Sbjct: 456 FEQMVQKGCVPDTITYTTLIDGFSK----------ASKMDEARK 489
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 159/337 (47%), Gaps = 45/337 (13%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ F LI CK+ + + ++ KR F PD+ YT ++ G+ + +L +
Sbjct: 85 GCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTG 143
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G PD +Y ++I+ C R DEA ELF M + C F TLI
Sbjct: 144 FKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEA 203
Query: 125 LGSEKRLSEALQFFGQSKKRGFEP-------------------EA--------------- 150
L + +L EA + + + +RG+EP EA
Sbjct: 204 LSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATS 263
Query: 151 -PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
YN+++ YC R++D +++ +M +C P+ +TY+I++ +A R ++A +FK
Sbjct: 264 RVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFK 323
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQ-VDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+S G +P +TY +++ Y+AQ ++ A +DE L V+ Y+T+I L
Sbjct: 324 LLSSY-GCKPNAATYTTIIQGL-YDAQRMEEAKAFFDE-----ALDVIS-YTTVIKGLAD 375
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++D+AC+ F+++ G P ++ + L G
Sbjct: 376 SKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 2/220 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I K +VE A E+ + M K PD +Y L++G+ + + + VY M
Sbjct: 611 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 670
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRL 131
G +P+ V++ ++++ + D A LF+EM E P+ + LI+GLG R+
Sbjct: 671 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRV 730
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
SEA F + RG PE TY +++ + + RI +A +++++M K G+ P+ + Y +
Sbjct: 731 SEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 790
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ LI + + A+ VF+ M ++ G P TY+++ R F
Sbjct: 791 ITGLIDSSMVDTAWDVFQEMMKR-GCAPNEVTYKVLRRGF 829
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + +N L+D K V++A V+D+M P+ ++ +L+ G +
Sbjct: 634 MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 693
Query: 61 LLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+++EM + D P +VSY I+I+ A R EA F+EM P H +
Sbjct: 694 TDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYT 753
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI L R+ EA + K G P+ Y+A++ S ++ A+ + EM K
Sbjct: 754 SLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKR 813
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
G PN TY ++ AGR + +V + S+ E
Sbjct: 814 GCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGVAME 852
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 146/298 (48%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++ CK + A+EV +M++R +P + +T LL + + +V EM
Sbjct: 251 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 310
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV+ Y +I+ S R EA +F M C P + T+I +
Sbjct: 311 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 370
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + K G P+ YN+++ Y R++ A+ + D M GI PN T+++++
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K G+T+ A+S+FK M K PT+ +Y I++ +V A + EM RG+
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+P H Y++LI SL ++ +A K ++M+ +G+ P Q +S L L D M +TA
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 548
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 150/320 (46%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +ID L K+ +E + F++M P +YT++++G + + L
Sbjct: 138 GCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 197
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V+ +M G PD ++Y +I+ A + DEA +L M +P+ + ++++G
Sbjct: 198 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 257
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++EA + Q ++RG EP + +++ Y R +AY+++ EM G P+
Sbjct: 258 FCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPD 317
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ L GR EA VF M K G P TY +++ F V+ A I
Sbjct: 318 VILYTSLIDLLFSTGRVPEARHVFDSMIEK-GCAPDALTYGTIIQNFSKIGNVEAAGEIL 376
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M GV P Y++L++ +++D A + M+ GI+P F+ L L +
Sbjct: 377 ELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKD 436
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G + A L +++ + + P
Sbjct: 437 GKTDRAFSLFKEMLEKEEVP 456
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 145/301 (48%), Gaps = 5/301 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ F LI CK+ + ++ ++ KR F PD+ YT ++ G+ + +L
Sbjct: 37 GCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDL--- 92
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ Y DV+SY +I +KR DEA ELF E++ C P+ + +I+G
Sbjct: 93 DTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDG 152
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ + L+ F + P TY V+ C + + DA ++ ++M + G P+
Sbjct: 153 LLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPD 212
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY ++ KA + +EA + M K G EPT TY +V FC ++ A +
Sbjct: 213 TITYTTLIDGFSKASKMDEARKLLDVMLTK-GPEPTAVTYGSIVHGFCKLDMINEAKEVI 271
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M+ RG P + ++++L++ + + ++A + EM G P L+++L L
Sbjct: 272 AQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 331
Query: 305 G 305
G
Sbjct: 332 G 332
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 150/309 (48%), Gaps = 7/309 (2%)
Query: 5 GLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
LK+ PD + +I CK+ ++ + + + D+ SYT +++G K +
Sbjct: 68 ALKRFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISYTTVIKGLADSKRI 124
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
E++ E+K G P+VV+Y +I+ A R ++ ++ F EM ++C P+ + +
Sbjct: 125 DEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVV 184
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL + L +A + F Q ++G P+ TY ++ + + ++++A +++D M G
Sbjct: 185 IDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 244
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P TY ++H K EA V +M R+ G EP + + ++ + + + A
Sbjct: 245 EPTAVTYGSIVHGFCKLDMINEAKEVIAQM-RERGCEPGLFIFTSLLSYYLSKGRAEEAY 303
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ EM ARG P + +Y++LI+ L ++ +A F M++ G P + + Q
Sbjct: 304 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 363
Query: 302 RDEGMEETA 310
G E A
Sbjct: 364 SKIGNVEAA 372
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 115/220 (52%), Gaps = 2/220 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I K +VE A E+ + M K PD +Y L++G+ + + + VY M
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRL 131
G +P+ V++ ++++ + D A LF+EM E P+ + LI+GLG R+
Sbjct: 416 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRV 475
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
SEA F + RG PE TY +++ + + RI +A +++++M K G+ P+ + Y +
Sbjct: 476 SEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 535
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ LI + + A+ VF+ M ++ G P TY+++ R F
Sbjct: 536 ITGLIDSSMVDTAWDVFQEMMKR-GCAPNEVTYKVLRRGF 574
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 32/300 (10%)
Query: 42 DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSA-------- 93
+P I SY ++ G + + + M D+G EPDV+++ +I+ C A
Sbjct: 4 EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63
Query: 94 ------KRYDEAVELFREMEATNCK-------------PSPHI----FCTLINGLGSEKR 130
KR+ V L+ + CK P + + T+I GL KR
Sbjct: 64 LLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKR 123
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ EA + F + K G P Y AV+ + RI D + +EM P TY +
Sbjct: 124 IDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTV 183
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
V+ L KA +A VF++M +K G P TY ++ F +++D A ++ D M +
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMVQK-GCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G P Y ++++ C D +++A + +M + G P +F++L +G E A
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 119/274 (43%), Gaps = 35/274 (12%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G EP +VSY +I+ S + DEA + F M C+P F TLI+G +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCW-------------------------------- 162
+ Q+ KR F P+ Y +V+ YC
Sbjct: 62 HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
S RI++A + +E++ G PN Y V+ L+KAGR E+ F+ MS PT +
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCV-PTRT 179
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY +V+ C + A +++++M +G +P Y+TLI+ K+D+A K M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239
Query: 283 LDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQ 315
L G P + ++ + + + E V+AQ
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQ 273
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 1/219 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + +N L+D K V++A V+D+M P+ ++ +L+ G +
Sbjct: 379 MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 438
Query: 61 LLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+++EM + + P +VSY I+I+ A R EA F+EM P H +
Sbjct: 439 TDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYT 498
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI L R+ EA + K G P+ Y+A++ S ++ A+ + EM K
Sbjct: 499 SLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKR 558
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
G PN TY ++ AGR + +V + S+ E
Sbjct: 559 GCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGVAME 597
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 158/289 (54%), Gaps = 6/289 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FGL+ + F L+D LCK V+ A ++F+ M+ RF +++ +T LL GW +++
Sbjct: 210 MPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR-LRFPVNLRYFTSLLYGWCREEK 268
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ V +MK+ GFEPD+V Y +++ + +A + +A +L ++M +P+ +
Sbjct: 269 MMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTV 328
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L R+ EA++ F + ++ E + TY A+V +C +I+ Y ++D+M K G
Sbjct: 329 LIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIKKG 388
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE--PTVSTYEIVVRMFCYNAQVD 238
+ P+ TY +H + + E+ + M + E P + Y +V+R+ C +V
Sbjct: 389 LMPSQLTY---MHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVK 445
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
A+R+W+EM+ G+ P + +IN L + L +AC +F+EM+ G+
Sbjct: 446 EAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDHFKEMVARGL 494
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 7/280 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRR---FDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+ ++ L K R + ++M+K +P++ + +L++ + + EV
Sbjct: 151 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAIEVLD 208
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM G EPD +G +++A C +A +LF +M + F +L+ G E+
Sbjct: 209 EMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR-LRFPVNLRYFTSLLYGWCREE 267
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ EA Q K+ GFEP+ Y ++ Y + ++ DAY ++ +MR+ G PN Y
Sbjct: 268 KMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYT 327
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ L K R EEA VF M R E V TY +V FC ++D + D+M
Sbjct: 328 VLIQALCKVDRMEEAMKVFVEMERYE-CEADVVTYTALVSGFCKWGKIDKCYLVLDDMIK 386
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+G++P Y ++ + ++KL + + ++M I P
Sbjct: 387 KGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHP 426
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+ ++V+ F V A+ + DEM G+ P +++ L+++LC + DA K F+
Sbjct: 187 FVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFE--- 243
Query: 284 DIGIRPPGQL--FSNLKQAL-RDEGMEETAVVLAQ 315
D+ +R P L F++L R+E M E VL Q
Sbjct: 244 DMRLRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQ 278
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 151/289 (52%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ ++ +ID+LCK R V A ++F MK + P+I +Y L++G
Sbjct: 36 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 95
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM P++V++ ++IN C EA + + M +P+ + +
Sbjct: 96 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 155
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG + + EA + F +G +P+ +YN ++ YC + RI +A ++ +EM G
Sbjct: 156 LMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 215
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y+ ++ L + GR EA+ +FK M G P + TY I++ FC + A
Sbjct: 216 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN-GNLPDLCTYSILLDGFCKQGYLAKA 274
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
R++ M++ + P M MY+ LI+++C L +A K F E+ G++P
Sbjct: 275 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQP 323
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 137/270 (50%), Gaps = 1/270 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M R + PD+ +YT ++ G + ++ ++++M + G +PDVV+Y +I++ C +R
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+EA+++F M+A P+ + +LI GL + R EA + P T++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ +C + +A ++ M + G+ PN TY +++ EA +F M K
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK- 179
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G +P V +Y I++ +C ++ A ++++EM +G+ P + Y+TLI+ LC +L +A
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
F+ ML G P +S L +G
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQG 269
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + ++ L++ V A+++FD M + PD+ SY IL+ G+ + K
Sbjct: 141 MTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 200
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G PD+VSY +I+ C R EA +LF+ M P +
Sbjct: 201 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 260
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + L++A + F + +P YN ++ A C S + +A ++ E+ G
Sbjct: 261 LLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQG 320
Query: 181 IGPNTRTYDI 190
+ PN + + +
Sbjct: 321 LQPNMKHWKL 330
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 158/316 (50%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K L +N L+ LCK+ ++ M R+ P++ ++ +L++ + ++
Sbjct: 231 METKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGK 290
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L NE+Y+EM G P+ ++Y +++ +C R EA + M NC P F +
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + KRG TY+ +V +C S ++ A + EM G
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G+ E+A +F+ + +K + Y I++ C +V+ A
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMNLDIVMYTIIIEGMCKGGKVEDA 469
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I+ LC + L +A ++M + G P ++ L +A
Sbjct: 470 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRA 529
Query: 301 -LRDEGMEETAVVLAQ 315
LRD + +A ++ +
Sbjct: 530 HLRDGDLTASAKLIEE 545
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 163/353 (46%), Gaps = 34/353 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + N +I+ C+ A V K+ K ++PD ++ L+ G +
Sbjct: 91 MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK 150
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M ++G +P+VV+Y ++N C + A++L R+M+ N K + T
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L + + A+ F + + +G + TYN++VG C + + ND +++ +M
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK---PGT-------------------- 217
I PN T+++++ +K G+ +EA ++K M K P T
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330
Query: 218 -----------EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
P + T+ +++ +C +VD M+++ ++ RG++ YS L+
Sbjct: 331 NMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGF 390
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
C KL+ A + FQEM+ +G+ P + L L D G E A+ + + + K
Sbjct: 391 CQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 443
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 170/355 (47%), Gaps = 36/355 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N +++ +CKS A ++ KM +R D+ +Y+ +++ + + +
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G + +V+Y ++ C A ++++ V+L ++M + P+ F LI+
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + +G P TYN+++ YC R+++A M+D M + P+
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++ K R +E +F+++S++ TV TY I+V+ FC + ++++A ++
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTV-TYSILVQGFCQSGKLEIAEELF 403
Query: 245 DEMKARGVLP-VMH----------------------------------MYSTLINSLCHE 269
EM + GVLP VM MY+ +I +C
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG 463
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
K++DA F + G++P ++ + L +G A +L +K+++ P
Sbjct: 464 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEP 518
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 133/269 (49%), Gaps = 1/269 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A ++F +M + R P + ++ G K + + ++M+ +G ++ + IMIN
Sbjct: 49 AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C + A + ++ +P F TLINGL E ++SEA+ + + G +P
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TYN++V C S + A ++ +M + + + TY ++ L + G + A S+F
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
K M K G + ++ TY +V C + + +++ +M +R ++P + ++ LI+
Sbjct: 229 KEMETK-GIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVK 287
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
E KL +A + ++EM+ GI P +++L
Sbjct: 288 EGKLQEANELYKEMITKGISPNTITYNSL 316
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 1/252 (0%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G V YG + + + D+A++LF+EM + PS F +G+ S K+ +
Sbjct: 25 GISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLV 84
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L F + + G T N ++ +C + AY ++ ++ K G P+T T++ +++
Sbjct: 85 LDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLING 144
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L + EA + RM G +P V TY +V C + +A+ + +M R V
Sbjct: 145 LCLESKVSEAVVLVARMVEN-GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA 203
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ YST+I+SLC + +D A F+EM GI+ +++L L G V L
Sbjct: 204 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLL 263
Query: 315 QKIDKLRKTPLV 326
+ + + P V
Sbjct: 264 KDMTSRKIIPNV 275
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 113/223 (50%), Gaps = 1/223 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ F LI CK + V+ ++F K+ KR + +Y+IL++G+ Q L E++
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+EM G PDV++YGI+++ C + ++A+E+F +++ + ++ +I G+
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG 463
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ +A F +G +P TY ++ C +++A ++ +M + G PN TY
Sbjct: 464 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTY 523
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ ++ ++ G + + + M + G S+ ++V+ M
Sbjct: 524 NTLIRAHLRDGDLTASAKLIEEM-KSCGFSADASSIKMVIDML 565
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 6/218 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ L+ C+S +E A+E+F +M PD+ +Y ILL+G
Sbjct: 371 ISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGK 430
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ +++ D+V Y I+I C + ++A LF + KP+ +
Sbjct: 431 LEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 490
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + LSEA + ++ G EP TYN ++ A+ + + ++++EM+ CG
Sbjct: 491 MISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 550
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
+ + +V+ L A FK R PG +
Sbjct: 551 FSADASSIKMVIDML------SSAVWWFKEPRRSPGVK 582
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 158/317 (49%), Gaps = 11/317 (3%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+LI SR++++A V ++K PD+ +Y ++ G+ + + S V MK
Sbjct: 15 KLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRK 73
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSE 133
GF PDVV++ IMI C + D A+++F E+ + NCKP+ + LI E + E
Sbjct: 74 GFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDE 133
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL+ + RG EP+ TYN + C +++ A+ + + G P+ TY+I+L
Sbjct: 134 ALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLR 193
Query: 194 HLIKAGRTEEA----YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
L+ G+ +E +F R G EP V TY I++ C + +++ ++ + MK
Sbjct: 194 ALLNQGKWDEGEKWMSEIFSR-----GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKE 248
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G+ P + Y LI + C E KLD A ++ M+ G P ++ + AL G +
Sbjct: 249 KGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDH 308
Query: 310 AVVLAQKIDKLRKTPLV 326
AV + K+D++ P V
Sbjct: 309 AVEIFGKLDEVGCPPNV 325
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 159/306 (51%), Gaps = 3/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW-GQQK 59
++K G K ++ +N +I CK+ +E A+ V D+MK++ F PD+ ++ I++ + G+ K
Sbjct: 36 LEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGK 94
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L++ +KD+ +P +++Y I+I A+ DEA++L EM + +P +
Sbjct: 95 IDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYN 154
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+ GL E ++ A +F RG +P+ TYN ++ A + ++ + M E+
Sbjct: 155 VITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR 214
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN TY I++ L + G+ EE+ ++ K M K G P Y+ ++ FC ++DM
Sbjct: 215 GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEK-GLTPDAYCYDPLIAAFCREGKLDM 273
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ D M G LP + Y+T++ +LC D A + F ++ ++G P ++ +
Sbjct: 274 AIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLS 333
Query: 300 ALRDEG 305
AL G
Sbjct: 334 ALWSSG 339
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + +N + LCK V+RA E + R PD+ +Y ILL Q
Sbjct: 145 GLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEG 204
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ E+ G EP+VV+Y I+I++ C + +E+V L + M+ P + + LI
Sbjct: 205 EKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAA 264
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L A++F GF P+ YN ++ A C + + A + ++ + G PN
Sbjct: 265 FCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPN 324
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ +L L +G A + +M K G +P V TY ++ C + VD A+ +
Sbjct: 325 VSSYNTMLSALWSSGDRYRALGMISQMLSK-GIDPDVITYNSLISCLCRDGMVDEAIGLL 383
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M + P + Y T++ LC ++DDA + M++ G +P ++ L + +
Sbjct: 384 ADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFS 443
Query: 305 GMEETAVVLAQKI 317
G A+ LA +
Sbjct: 444 GSRTQAMELANSL 456
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 148/325 (45%), Gaps = 2/325 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQK 59
M + G ++ N +I T C ++ A +VF+++ K P + +YTIL+E + +
Sbjct: 70 MKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEG 129
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ ++ EM G EPD +Y ++ C + D A E R + + CKP +
Sbjct: 130 GIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYN 189
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L+ L ++ + E ++ + RG EP TY+ ++ + C +I ++ ++ M++
Sbjct: 190 ILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEK 249
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P+ YD ++ + G+ + A M G P + Y ++ C N D
Sbjct: 250 GLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICD-GFLPDIVNYNTIMAALCKNGNGDH 308
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ I+ ++ G P + Y+T++++L A +ML GI P +++L
Sbjct: 309 AVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLIS 368
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
L +GM + A+ L + R P
Sbjct: 369 CLCRDGMVDEAIGLLADMLSGRFQP 393
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 104/190 (54%), Gaps = 2/190 (1%)
Query: 117 IFCT-LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
I CT LI G + + + +A + G +K G +P+ YNAV+ +C + RI A ++D
Sbjct: 11 ILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDR 69
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M++ G P+ T++I++ G+ + A VF+ + + +PT+ TY I++ +
Sbjct: 70 MKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEG 129
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+D A+++ DEM +RG+ P Y+ + LC E K+D A ++ + + G +P ++
Sbjct: 130 GIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYN 189
Query: 296 NLKQALRDEG 305
L +AL ++G
Sbjct: 190 ILLRALLNQG 199
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + ++ LI C+ ++ A E D M F PDI +Y ++ + N
Sbjct: 246 MKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGN 305
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E++ ++ + G P+V SY M++A S+ A+ + +M + P + +
Sbjct: 306 GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNS 365
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + + EA+ F+P +Y V+ C + RI+DA ++ M + G
Sbjct: 366 LISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENG 425
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEA 204
PN TY +++ + +G +A
Sbjct: 426 CQPNETTYTLLIEGIGFSGSRTQA 449
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N LI LC+ V+ A + M RF P+I SY +L G + +
Sbjct: 355 GIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDA 414
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
EV M ++G +P+ +Y ++I + +A+EL + N
Sbjct: 415 IEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMN 460
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 161/316 (50%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + ++ LI LC A + M +R+ +PD+ +++ L++ + ++
Sbjct: 896 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++Y EM +P +V+Y +IN C R DEA ++F M + +C P + T
Sbjct: 956 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 1015
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + +RG TYN ++ + + A + EM G
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +L L K G+ E+A VF+ + R EPT+ TY I++ C +V+
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDG 1134
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+T+I+ C + ++A F+EM + G P ++ L +A
Sbjct: 1135 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 1194
Query: 301 -LRDEGMEETAVVLAQ 315
LRD E +A ++ +
Sbjct: 1195 RLRDGDREASAELIKE 1210
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 164/319 (51%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ +L FN +I+ C V A + KM K ++PD + L+ G+ ++
Sbjct: 214 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 273
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G++PD+V+Y +I++ C KR ++A + F+E+E +P+ +
Sbjct: 274 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 333
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL + R S+A + K+ P TY+A++ A+ + ++ +A + +EM +
Sbjct: 334 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 393
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY +++ L R +EA +F M K G V +Y ++ FC +V+
Sbjct: 394 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVEDG 452
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+++ EM RG++ Y+TLI +D A ++F +M GI P ++ L
Sbjct: 453 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 512
Query: 301 LRDEGMEETAVVLAQKIDK 319
L D G E A+V+ + + K
Sbjct: 513 LCDNGELEKALVIFEDMQK 531
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 155/316 (49%), Gaps = 1/316 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ DFNRL+ + K + + + KM+ D+ ++ I++ + + +
Sbjct: 187 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 246
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPD V+ G ++N C R +AV L +M KP + +I+ L
Sbjct: 247 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 306
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
KR+++A FF + +++G P TY A+V C S R +DA R++ +M K I PN TY
Sbjct: 307 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 366
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+L +K G+ EA +F+ M R +P + TY ++ C + ++D A +++D M
Sbjct: 367 SALLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
++G L + Y+TLIN C +++D K F+EM G+ ++ L Q G +
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485
Query: 309 TAVVLAQKIDKLRKTP 324
A ++D +P
Sbjct: 486 KAQEFFSQMDFFGISP 501
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 160/312 (51%), Gaps = 13/312 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + G K ++ +N +ID+LCK++ V A + F +++++ P++ +YT L+ G
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W LLS +M P+V++Y +++A + EA ELF EM + P
Sbjct: 344 WSDAARLLS------DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 397
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +LINGL R+ EA Q F +G + +YN ++ +C + R+ D ++
Sbjct: 398 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 457
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM + G+ NT TY+ ++ +AG ++A F +M G P + TY I++ C N
Sbjct: 458 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDN 516
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+++ A+ I+++M+ R + + Y+T+I +C K+++A F + G++P +
Sbjct: 517 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 576
Query: 295 SNLKQALRDEGM 306
+ + L +G+
Sbjct: 577 TTMMSGLCTKGL 588
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 143/276 (51%), Gaps = 1/276 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +L + +++ LCK + A + +KM++ + +P + Y +++G + K++
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G P+VV+Y +I+ C+ R+ +A L +M P F LI+
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 949
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + KR +P TY++++ +C R+++A +M + M P+
Sbjct: 950 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 1009
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ K R EE VF+ MS++ TV TY I+++ DMA I+
Sbjct: 1010 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGDCDMAQEIF 1068
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
EM + GV P + Y+TL++ LC KL+ A F+
Sbjct: 1069 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 1104
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 154/311 (49%), Gaps = 13/311 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQKNLLSMNE 66
+N +ID LCK +H++ A +F +M+ + P++ +Y+ L+ W LLS
Sbjct: 873 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS--- 929
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+M + PDV ++ +I+A + EA +L+ EM + PS + +LING
Sbjct: 930 ---DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 986
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL EA Q F + P+ TYN ++ +C R+ + + EM + G+ NT
Sbjct: 987 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 1046
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+I++ L +AG + A +FK M G P + TY ++ C N +++ AM +++
Sbjct: 1047 TYNILIQGLFQAGDCDMAQEIFKEMV-SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 1105
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
++ + P ++ Y+ +I +C K++D F + G++P ++ + +G
Sbjct: 1106 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 1165
Query: 307 EETAVVLAQKI 317
+E A L +++
Sbjct: 1166 KEEADALFKEM 1176
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 145/287 (50%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++ G++ + + L++ LC S A + M K++ P++ +Y+ LL+ + +
Sbjct: 319 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 378
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L E++ EM +PD+V+Y +IN C R DEA ++F M + C + T
Sbjct: 379 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 438
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING KR+ + ++ F + +RG TYN ++ + + ++ A +M G
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 498
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+I+L L G E+A +F+ M ++ + + TY V+R C +V+ A
Sbjct: 499 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE-MDLDIVTYTTVIRGMCKTGKVEEA 557
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
++ + +G+ P + Y+T+++ LC + L + + +M G+
Sbjct: 558 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 156/322 (48%), Gaps = 1/322 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + FN LI L A + D+M + PD+ +Y +++ G ++ +
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M+ EP V+ Y +I+ C K D+A+ LF+EME +P+ + +LI+
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R S+A + +R P+ T++A++ A+ ++ +A ++ DEM K I P+
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ R +EA +F+ M K P V TY +++ FC +V+ M ++
Sbjct: 975 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM RG++ Y+ LI L D A + F+EM+ G+ P ++ L L
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093
Query: 305 GMEETAVVLAQKIDKLRKTPLV 326
G E A+V+ + + + + P +
Sbjct: 1094 GKLEKAMVVFEYLQRSKMEPTI 1115
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID K + A++++D+M KR DP I +Y+ L+ G+ L +++ M
Sbjct: 943 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 1002
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDVV+Y +I C KR +E +E+FREM + + LI GL
Sbjct: 1003 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 1062
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G P TYN ++ C + ++ A + + +++ + P TY+I++
Sbjct: 1063 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 1122
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAG+ E+ + +F +S K G +P V Y ++ FC + A ++ EMK G
Sbjct: 1123 EGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 1181
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
LP Y+TLI + + + + + +EM G + L D ++++
Sbjct: 1182 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 1238
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 141/312 (45%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ LI+ C+ + A V KM K ++P+I + + LL G+ K
Sbjct: 721 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 780
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M G++P+ V++ +I+ + EA+ L M A C+P +
Sbjct: 781 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 840
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL A + ++ EP YN ++ C ++DA + EM G
Sbjct: 841 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 900
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY ++ L GR +A + M + P V T+ ++ F ++ A
Sbjct: 901 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEA 959
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++DEM R + P + YS+LIN C D+LD+A + F+ M+ P ++ L +
Sbjct: 960 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 1019
Query: 301 L-----RDEGME 307
+EGME
Sbjct: 1020 FCKYKRVEEGME 1031
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L+D K+ V A+E+F++M + DPDI +Y+ L+ G + N+++ M
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G DVVSY +IN C AKR ++ ++LFREM + + TLI G +
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A +FF Q G P+ TYN ++G C + + A + ++M+K + + TY V+
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 545
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K G+ EEA+S+F +S K G +P + TY ++ C + ++ +MK G+
Sbjct: 546 RGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604
Query: 253 L 253
+
Sbjct: 605 M 605
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 143/286 (50%), Gaps = 1/286 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+F++L+ + K + + ++M+ + +Y+IL+ + ++ L V +M
Sbjct: 697 EFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 756
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G+EP++V+ ++N +C +KR EAV L +M T +P+ F TLI+GL +
Sbjct: 757 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 816
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
SEA+ + +G +P+ TY VV C + A+ ++++M + + P Y+ +
Sbjct: 817 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 876
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K ++A ++FK M K G P V TY ++ C + A R+ +M R
Sbjct: 877 IDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ P + +S LI++ E KL +A K + EM+ I P +S+L
Sbjct: 936 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 981
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A +F +M K R P I ++ LL + + + +M++ G + +Y I
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C + A+ + +M +P+ +L+NG KR+SEA+ Q G
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++P T+N ++ + ++A ++D M G P+ TY +V++ L K G T+ A+
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ +M + EP V Y ++ C +D A+ ++ EM+ +G+ P + YS+LI+
Sbjct: 856 NLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC+ + DA + +M++ I P FS L A EG
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 954
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 135/272 (49%), Gaps = 1/272 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
RL T + + A ++F M K R P I + LL + K + + ++M+
Sbjct: 158 RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 217
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G D+ ++ I+IN C + A+ + +M +P +L+NG R+S+A
Sbjct: 218 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 277
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ + + G++P+ YNA++ + C + R+NDA+ E+ + GI PN TY +++
Sbjct: 278 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 337
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L + R +A + M +K T P V TY ++ F N +V A +++EM + P
Sbjct: 338 LCNSSRWSDAARLLSDMIKKKIT-PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 396
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+ YS+LIN LC D++D+A + F M+ G
Sbjct: 397 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 428
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 162/392 (41%), Gaps = 88/392 (22%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K + ++ + +I +CK+ VE A +F + + PDI +YT ++ G +
Sbjct: 529 MQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 588
Query: 61 LLSMNEVYREMKDD---------------------------GFEPDV---VSYGI----- 85
L + +Y +MK + G+ P + + G+
Sbjct: 589 LHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKAL 648
Query: 86 -MINAHCSAKRYD----------------EAVELFREMEATNCKPS-------------- 114
++ A YD +AV LF EM + PS
Sbjct: 649 SLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKM 708
Query: 115 ------------------PH---IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
PH + LIN +L AL G+ K G+EP T
Sbjct: 709 NKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTL 768
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
++++ YC S RI++A ++D+M G PNT T++ ++H L + EA ++ RM
Sbjct: 769 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVA 828
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
K G +P + TY +VV C D+A + ++M+ + P + +Y+T+I+ LC +D
Sbjct: 829 K-GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMD 887
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
DA F+EM GIRP +S+L L + G
Sbjct: 888 DALNLFKEMETKGIRPNVVTYSSLISCLCNYG 919
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 161/379 (42%), Gaps = 55/379 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ +N L+ LC + +E+A +F+ M+KR D DI +YT ++ G +
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 553
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA------------ 108
+ ++ + G +PD+V+Y M++ C+ E L+ +M+
Sbjct: 554 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD 613
Query: 109 -------------TNCKPSPHIF-----------CTLI-----------------NGLGS 127
+C +P + +L+ NGL S
Sbjct: 614 GDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGL-S 672
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
E +L +A+ FG+ K P ++ ++ A + + + ++M+ GI N T
Sbjct: 673 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 732
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y I+++ + + A +V +M K G EP + T ++ +C++ ++ A+ + D+M
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKM-MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 791
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
G P ++TLI+ L +K +A M+ G +P + + L G
Sbjct: 792 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 851
Query: 308 ETAVVLAQKIDKLRKTPLV 326
+ A L K+++ + P V
Sbjct: 852 DLAFNLLNKMEQGKLEPGV 870
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 140/344 (40%), Gaps = 51/344 (14%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N LI+ CK++ VE ++F +M +R + +Y L++G+ Q ++
Sbjct: 428 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 487
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + +M G PD+ +Y I++ C ++A+ +F +M+ + T+I G
Sbjct: 488 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 547
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ EA F +G +P+ TY ++ C +++ + +M++ G+ N
Sbjct: 548 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 607
Query: 185 TRTY---DIVLHHL-----------------IKAGRTEEAYSVFKRMSRKPGTE------ 218
T DI L IK+G ++A S+ + S K +
Sbjct: 608 DCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLS 667
Query: 219 -------------------------PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
P++ + ++ + D+ + + ++M+ G+
Sbjct: 668 RNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 727
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ YS LIN C +L A +M+ +G P S+L
Sbjct: 728 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSL 771
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+ ++A++LF +M + PS F L++ + K+ + + + G + T+N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
V+ +C +++ A ++ +M K G P+ T +++ + R +A S+ +M +
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-E 286
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G +P + Y ++ C +V+ A + E++ +G+ P + Y+ L+N LC+ + D
Sbjct: 287 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A + +M+ I P +S L A G
Sbjct: 347 AARLLSDMIKKKITPNVITYSALLDAFVKNG 377
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+D LCK+ +E+A VF+ +++ + +P I +Y I++EG + +
Sbjct: 1075 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 1134
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + G +PDVV+Y MI+ C +EA LF+EM+ P+ + TLI
Sbjct: 1135 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 1194
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+ + + + + GF +A T V
Sbjct: 1195 RLRDGDREASAELIKEMRSCGFAGDASTIGLV 1226
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L++A+ F K P +N ++ A + + + +M GI + T++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
IV++ + A S+ +M K G EP T +V FC +V A+ + D+M
Sbjct: 228 IVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 286
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G P + Y+ +I+SLC +++DA +F+E+ GIRP ++ L L +
Sbjct: 287 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346
Query: 310 AVVLAQKIDKLRKTPLV 326
A L + K + TP V
Sbjct: 347 AARLLSDMIKKKITPNV 363
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N +I C+ E A +F +MK+ P+ Y L+ + + +
Sbjct: 1145 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 1204
Query: 65 NEVYREMKDDGFEPDVVSYGIMIN 88
E+ +EM+ GF D + G++ N
Sbjct: 1205 AELIKEMRSCGFAGDASTIGLVTN 1228
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 163/317 (51%), Gaps = 7/317 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G+ L N LI+ C H+ A VF + KR + PD + L++G G+ K
Sbjct: 123 GVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRA 182
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L ++ ++ GF+ D VSYG +IN C A L R++E + KP ++ T+
Sbjct: 183 LYFHD---KVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTI 239
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ L KR+ +A + + +G P TYN ++ +C + +A+ +++EM+ I
Sbjct: 240 IHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNI 299
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ T++I++ L K G+ +EA S+F+ M K P + TY ++ C N ++ A+
Sbjct: 300 NPDVYTFNILIDALGKEGKIDEAISLFEEMKHK-NMFPNIVTYTSLIDGLCKNHHLERAI 358
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ +MK +G+ P ++ Y+ L+++LC +L++A ++FQ +L G + ++ + L
Sbjct: 359 ALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGL 418
Query: 302 RDEGMEETAVVLAQKID 318
G+ + L K++
Sbjct: 419 CKAGLFGDVMDLKSKME 435
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 1/283 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + LI+ LCK+ + + K++ PD+ YT ++ + K +
Sbjct: 193 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDA 252
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y EM G P+V +Y +I C EA L EM+ N P + F LI+
Sbjct: 253 CDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDA 312
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
LG E ++ EA+ F + K + P TY +++ C + + A + +M++ GI P+
Sbjct: 313 LGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 372
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+L L K GR E A F+ + K G V TY +++ C M +
Sbjct: 373 VYSYTILLDALCKGGRLENAKQFFQHLLVK-GYHLNVRTYNVMINGLCKAGLFGDVMDLK 431
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+M+ +G +P + T+I +L +D+ D A K+ +EM+ G+
Sbjct: 432 SKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 3/304 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + N LI LC ++RA DK+ + F D SY L+ G +
Sbjct: 156 KRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 215
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ + R+++ +PDVV Y +I+ C KR +A +L+ EM P+ + TLI
Sbjct: 216 AVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLI 275
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
G L EA + K + P+ T+N ++ A +I++A + +EM+ +
Sbjct: 276 YGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMF 335
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY ++ L K E A ++ K+M ++ G +P V +Y I++ C +++ A +
Sbjct: 336 PNIVTYTSLIDGLCKNHHLERAIALCKKM-KEQGIQPDVYSYTILLDALCKGGRLENAKQ 394
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL- 301
+ + +G + Y+ +IN LC D +M G P F + AL
Sbjct: 395 FFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALF 454
Query: 302 -RDE 304
+DE
Sbjct: 455 EKDE 458
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 1/255 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++ +K ++ + +I LCK++ V A +++ +M + P++ +Y L+ G+ N
Sbjct: 224 LEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGN 283
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EMK PDV ++ I+I+A + DEA+ LF EM+ N P+ + +
Sbjct: 284 LKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTS 343
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L A+ + K++G +P+ +Y ++ A C R+ +A + + G
Sbjct: 344 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKG 403
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N RTY+++++ L KAG + + +M K G P T++ ++ + D A
Sbjct: 404 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGK-GCMPDAITFKTIICALFEKDENDKA 462
Query: 241 MRIWDEMKARGVLPV 255
+ EM ARG+L V
Sbjct: 463 EKFLREMIARGLLEV 477
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 131/289 (45%), Gaps = 1/289 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A F++M R P + +L + K+ L++ ++++ + +G P++ + I+IN
Sbjct: 77 AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C A +F + P TLI GL + AL F + +GF+
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ +Y ++ C + R++ ++ + P+ Y ++H L K R +A ++
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLY 256
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K G P V TY ++ FC + A + +EMK + + P ++ ++ LI++L
Sbjct: 257 SEMIVK-GISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGK 315
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
E K+D+A F+EM + P +++L L E A+ L +K+
Sbjct: 316 EGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKM 364
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 167/330 (50%), Gaps = 14/330 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ Q+LP FN L+D L KSRH +A + ++ RRF PD +Y L +GW + K+
Sbjct: 171 GVAQDLPLFNSLLDALVKSRHAGKAASLVRALE-RRFPPDAVTYNTLADGWCRVKDTSRA 229
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-----TNCKPSPHIFC 119
++ R+M + G P +Y I++ + + A + F +M+ NCKP +
Sbjct: 230 LDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYT 289
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+++GLG +L +A + F + + G P TYNA++ C + DA + D+M +
Sbjct: 290 TVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRK 349
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN TY +++ L AG+ + A + +M R+ G EP V TY +++ ++
Sbjct: 350 GYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKRE-GCEPNVQTYNVLIGYLFEEGDIEK 408
Query: 240 AMRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFS 295
A+ +++ M K LP Y+ +I+++ + +D A + EM+D G P +F+
Sbjct: 409 ALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFN 468
Query: 296 NLKQALRDEGMEETA---VVLAQKIDKLRK 322
+ L G +E + + + +K +LR+
Sbjct: 469 RVLNGLMLTGNQELSRELLRMQEKYTRLRR 498
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 7/253 (2%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G D+ + +++A ++ +A L R +E P + TL +G K
Sbjct: 168 RSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALE-RRFPPDAVTYNTLADGWCRVKDT 226
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-----PNTR 186
S AL Q + G P TYN ++ + S ++ A+ +M+K G P+
Sbjct: 227 SRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVV 286
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y VLH L AG+ ++A VF MSR+ G P+++TY ++++ C V+ A+ ++D+
Sbjct: 287 SYTTVLHGLGVAGQLDKARKVFDEMSRE-GCTPSIATYNALIQVTCKKGNVEDAVAVFDD 345
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M +G +P + Y+ LI LCH K+D A K +M G P Q ++ L L +EG
Sbjct: 346 MIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGD 405
Query: 307 EETAVVLAQKIDK 319
E A+ L + + K
Sbjct: 406 IEKALHLFETMSK 418
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LI CK +VE A VFD M ++ + P++ +YT+L+ G
Sbjct: 311 MSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGK 370
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
+ ++ +MK +G EP+V +Y ++I ++A+ LF M + C P+ +
Sbjct: 371 IDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYN 430
Query: 120 TLINGLGSEKR---LSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+I+ + KR ++ A + + RG+ P +N V+
Sbjct: 431 IIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNG 473
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID LCK + A+ + +MK PD+ +Y L++G+G+ L + ++ EM+
Sbjct: 197 FNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMR 256
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDVV+Y ++N C R + A F EM+ + F T ++ +
Sbjct: 257 GCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVR 316
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ F Q + +G +P TY +V C + R++DA + +EM + G+ N TY +++
Sbjct: 317 EAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLV 376
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K G+ EA VF+ M R G Y ++ + A+ + EMK +G+
Sbjct: 377 DGLCKEGKVAEAEDVFRLMERA-GIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ +Y LI LC+ KLD+A +M + G++P +++N+ A E A+
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIA 495
Query: 313 LAQKI 317
L QK+
Sbjct: 496 LLQKM 500
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 155/317 (48%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + F+ +D CK+ V A ++F +M+ + P+ +YT L++G +
Sbjct: 290 MKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGR 349
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM G +VV+Y ++++ C + EA ++FR ME + + ++ T
Sbjct: 350 LDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTT 409
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G K AL + K +G E + Y A++ C ++++A ++++M +CG
Sbjct: 410 LIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++ KA + EA ++ ++M G P + TY +V C +D A
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKM-MDSGFRPNIVTYCALVDGLCKAGSIDEA 528
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +++M G+ P + Y+ L++ LC +LD A EM+D G+ + ++L
Sbjct: 529 ISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDG 588
Query: 301 LRDEGMEETAVVLAQKI 317
+G + A L K+
Sbjct: 589 HLKQGNLQDAFALKAKM 605
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 152/355 (42%), Gaps = 37/355 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N LID K +E +++ +M+ PD+ +Y L+ + +
Sbjct: 220 MKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGR 279
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EMK +G +VV++ ++A C EA++LF +M KP+ +
Sbjct: 280 MERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTC 339
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G RL +AL + ++G TY +V C ++ +A + M + G
Sbjct: 340 LVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAG 399
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I N Y ++H +E A S+ M K G E VS Y ++ C ++D A
Sbjct: 400 IRANELLYTTLIHGHFVYKNSERALSLLSEMKDK-GMELDVSLYGALIWGLCNLQKLDEA 458
Query: 241 MRIWDEM--------------------KAR---------------GVLPVMHMYSTLINS 265
+ ++M KAR G P + Y L++
Sbjct: 459 KSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDG 518
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDK 319
LC +D+A +F +M+D+G+ P Q ++ L L G +++ ++L + IDK
Sbjct: 519 LCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDK 573
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 34/316 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + L+D LCK V A++VF M++ + YT L+ G KN
Sbjct: 360 MVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EMKD G E DV YG +I C+ ++ DEA L +M+ KP+ I+
Sbjct: 420 SERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTN 479
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ ++ SEA+ + GF P TY A+V C + I++A ++M G
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG 539
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK-------------------------- 214
+ PN + Y ++ L K GR ++A + M K
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAF 599
Query: 215 --------PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
G + + Y V FC + A + EM G+ P +Y+ LIN
Sbjct: 600 ALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKC 659
Query: 267 CHEDKLDDACKYFQEM 282
+++A EM
Sbjct: 660 QKLGNMEEAAILQNEM 675
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++DA + +R+ + PNTRT + +L L + +E A+ +F+++ P V T+
Sbjct: 144 LDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP-----APNVFTFN 198
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
I++ C + A + MKA G P + Y++LI+ +L++ K EM
Sbjct: 199 IMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGC 258
Query: 286 GIRP 289
G RP
Sbjct: 259 GCRP 262
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 1/295 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K L FN +++ LCK+ +E A++VFD+M + PD+ SY LL G+ + L
Sbjct: 78 KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLA 137
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ EM G PDVV++ +I+A C A ++AV L +M + + F LI+G
Sbjct: 138 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 197
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ L +AL + +K G +P YNA++ YC R++ A ++ EM + P+
Sbjct: 198 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 257
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ K G + A+ + ++M +K G P TY ++R C +++ A +++
Sbjct: 258 TYSTIISGYCKVGNLDSAFQLNQKMLKK-GVLPDAITYSSLIRGLCEEKRLNDACELFEN 316
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M GV P Y+TLI+ C E ++ A EM+ G+ P +S L L
Sbjct: 317 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 371
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 149/312 (47%), Gaps = 16/312 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ F LI CK+ ++E+A + +M++R + ++T L++G+ ++
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 201
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L EM+ G +P VV Y +IN +C R D A EL REMEA KP + T
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G L A Q + K+G P+A TY++++ C R+NDA + + M + G
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ K G E+A S+ M RK G P V TY +++ +A+ A
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK-GVLPDVVTYSVLINGLSKSARTKEA 380
Query: 241 MRIWDEMKARGVLPVMHMYS---------------TLINSLCHEDKLDDACKYFQEMLDI 285
R+ ++ +P Y L+ C + + +A K +Q MLD
Sbjct: 381 HRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDR 440
Query: 286 GIRPPGQLFSNL 297
+ G ++S L
Sbjct: 441 NWKLDGSVYSIL 452
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 163/335 (48%), Gaps = 9/335 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N L+ LC +E A V M+ P+ +Y L+ + +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 61 LLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L V M+++G +P++V++ M+N C A R + A ++F EM P +
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TL++G L E+L F + +RG P+ T+ +++ A C + + A ++ +MR+
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ N T+ ++ K G ++A + M RK G +P+V Y ++ +C ++D+
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEM-RKCGIQPSVVCYNALINGYCKLGRMDL 239
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + EM+A+ V P + YST+I+ C LD A + Q+ML G+ P +S+L +
Sbjct: 240 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 299
Query: 300 ALRDEG-------MEETAVVLAQKIDKLRKTPLVD 327
L +E + E + L + D+ T L+D
Sbjct: 300 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 334
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 50/184 (27%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ-- 58
M + G++ + + LID CK +VE+A + D+M ++ PD+ +Y++L+ G +
Sbjct: 317 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 376
Query: 59 -----------------------------------KNLLSM-------------NEVYRE 70
K+++++ ++VY+
Sbjct: 377 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 436
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M D ++ D Y I+I+ HC +A+ ++M + P+ +L+ GL E
Sbjct: 437 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 496
Query: 131 LSEA 134
+ EA
Sbjct: 497 VVEA 500
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 154/296 (52%), Gaps = 1/296 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN +I +C+ V++A E+ ++M + PD ++ IL++G + + +EV R +
Sbjct: 253 SFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRL 312
Query: 72 KDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ DG P+VV++ +I+ +C A + ++A+ ++ +M A+ P+ + LING G
Sbjct: 313 QRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGD 372
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L A++ + Q + P+ T+++++ YC +++DA R+ +M + I PN T+ I
Sbjct: 373 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 432
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++H L K R++EA + ++ +P P Y V+ + C +VD A I M+ +
Sbjct: 433 IIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 492
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
G P + Y+ LI C + ++ +A +F EM++ G P + L GM
Sbjct: 493 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 548
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 128/256 (50%), Gaps = 3/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQK 59
M++FG + N L+D LC++ V R EV ++++ P++ ++T ++ G+ +
Sbjct: 277 MNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 336
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L VY +M G P+ V+Y ++IN + AVE++++M C P F
Sbjct: 337 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 396
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-K 178
+LI+G +L +AL+ + + +P T++ ++ + C R ++A +++E+ +
Sbjct: 397 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLR 456
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P Y+ V+ L K G+ +EA + K M K G P TY I++ +C +++
Sbjct: 457 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK-GCRPDKYTYTILIIGYCMKSRIS 515
Query: 239 MAMRIWDEMKARGVLP 254
A+ + EM G P
Sbjct: 516 EAIMFFHEMVEAGCSP 531
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 118/250 (47%), Gaps = 5/250 (2%)
Query: 50 ILLEGWGQQKNLLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA 108
++L G+Q + L +++ +M G+ PD ++++ A D + L +
Sbjct: 152 VVLCRSGRQADAL---QLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 208
Query: 109 TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRIN 167
C+ + + L++ L R+ + + F + + R + P+ ++N V+ C ++
Sbjct: 209 FGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQ 268
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
A +++ M + G P+T T++I++ L + + V +R+ R P V T+ V
Sbjct: 269 KALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSV 328
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +C +++ AM ++++M A G++P Y+ LIN L A + +Q+M +
Sbjct: 329 ISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRC 388
Query: 288 RPPGQLFSNL 297
P FS+L
Sbjct: 389 PPDVVTFSSL 398
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ +N LI+ K + A EV+ +M + R PD+ +++ L++G+ +
Sbjct: 348 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 407
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFC 119
L ++ +M +P+V ++ I+I++ C R DEA+ L E+ + P I+
Sbjct: 408 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYN 467
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L ++ EA +++G P+ TY ++ YC RI++A EM +
Sbjct: 468 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 527
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
G P++ T + + L+KAG E V + S
Sbjct: 528 GCSPDSITVNCFISCLLKAGMPNEVDHVMRLAS 560
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
++I LC+S A ++FD+M + PD + + L+ L + + + +
Sbjct: 149 QIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 208
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + +Y ++++ R + V LF R ++ P F +I G+ ++
Sbjct: 209 FGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQ 268
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-PNTRTYDIV 191
+AL+ + + G P+ T+N +V C + ++ + ++ +++ G+ PN T+ V
Sbjct: 269 KALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSV 328
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ KAG+ E+A +V+ M G P TY +++ + + A+ ++ +M
Sbjct: 329 ISGYCKAGKLEDAMAVYNDMVAS-GIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 387
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + +S+LI+ C +LDDA + + +M I+P FS + +L + + A+
Sbjct: 388 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 447
Query: 312 VLAQKID 318
L +++
Sbjct: 448 GLLNELN 454
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ N LI++ C + A V + K + P ++T L+ G +
Sbjct: 80 MDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK 139
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +M +GF+PDV++YG +IN C A+ R ME NC+P+ ++ T
Sbjct: 140 IGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYST 199
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++L+EAL F +G P TY++++ C +A R+ M
Sbjct: 200 IIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 259
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ T++ ++ L K G +A+ V M + +P V TY ++ C +++
Sbjct: 260 IMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSD-LKPDVVTYNSLMDGHCLRSEMGKT 318
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++D M +G +P + Y+TLIN C +D A F+EM G+ P ++ L
Sbjct: 319 VNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHG 378
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G A+ L ++ + P
Sbjct: 379 LCHVGRLRDAIALFHEMVVYGQIP 402
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 4/307 (1%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
++ +PD FN L+D LCK V +A V D M + PD+ +Y L++G + +
Sbjct: 258 RKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGK 317
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V+ M G P V+SY +IN +C + D+A+ LF EM P + TLI+
Sbjct: 318 TVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIH 377
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL RL +A+ F + G P+ TY + C + R+ +A ++ + + P
Sbjct: 378 GLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDP 437
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ Y IV+ + +AG E A +F ++S K G P V TY I++ C + A ++
Sbjct: 438 DIHIYSIVMDGMCRAGELEAARDLFSKLSSK-GLHPDVRTYTIMINGLCQQGLLAEASKL 496
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ EM G P Y+ + ++ A + FQEML G + L + L D
Sbjct: 497 FGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSD 556
Query: 304 EGMEETA 310
+G++++
Sbjct: 557 DGLDQSV 563
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI LC H + A +F M R+ PD ++ L++ ++ ++ + V M
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMI 291
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+PDVV+Y +++ HC + V +F M C PS + TLING + +
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD 351
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ F + ++G P+ TYN ++ C R+ DA + EM G P+ TY I+
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 411
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+L K R EA + K + +P + Y IV+ C +++ A ++ ++ ++G+
Sbjct: 412 DYLCKNHRLAEAMVLLKVI-EGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 470
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + Y+ +IN LC + L +A K F EM + G P
Sbjct: 471 HPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSP 507
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
LK ++ +N L+D C + + VFD M ++ P + SYT L+ G+ + + +
Sbjct: 295 LKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAM 354
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ EM G PD V+Y +I+ C R +A+ LF EM P + L + L
Sbjct: 355 GLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYL 414
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
RL+EA+ + +P+ Y+ V+ C + + A + ++ G+ P+
Sbjct: 415 CKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDV 474
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
RTY I+++ L + G EA +F M G P TY ++ R F N + A++++
Sbjct: 475 RTYTIMINGLCQQGLLAEASKLFGEMDEN-GCSPNACTYNLITRGFLRNNETLRAIQLFQ 533
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
EM +RG + +TL+ + +D LD + K
Sbjct: 534 EMLSRG-FSIDVSTTTLLVEMLSDDGLDQSVK 564
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 4/296 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A +F++M + R P I ++ LL + K+ ++ +Y++M G + + I
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN+ C R A + ++ +PS F TLI GL E ++ EALQ F + G
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+P+ TY ++ C + A R + M + P Y ++ L K + EA
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
S+F M K G P TY ++ C A+R++ M R ++P ++TL+++
Sbjct: 215 SLFSDMLAK-GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 273
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDEGMEETAVVLAQKIDK 319
LC E + A M+ ++P +++L LR E M +T V + K
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSE-MGKTVNVFDTMVRK 328
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 152/323 (47%), Gaps = 7/323 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +ID+LCK R + A +F M + P+ +Y+ L+ G + ++ M
Sbjct: 197 YSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 256
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PD +++ +++A C +A + M ++ KP + +L++G +
Sbjct: 257 HRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMG 316
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + F ++G P +Y ++ YC ++ A + +EM + G+ P+T TY+ ++
Sbjct: 317 KTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLI 376
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L GR +A ++F M G P + TY I+ C N ++ AM + ++ +
Sbjct: 377 HGLCHVGRLRDAIALFHEMVVY-GQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNL 435
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P +H+YS +++ +C +L+ A F ++ G+ P + ++ + L +G+ A
Sbjct: 436 DPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASK 495
Query: 313 LAQKIDKLRKTP------LVDRG 329
L ++D+ +P L+ RG
Sbjct: 496 LFGEMDENGCSPNACTYNLITRG 518
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 1/231 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + LI+ CK + +++A +F++M ++ PD +Y L+ G
Sbjct: 325 MVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGR 384
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM G PD+V+Y I+ + C R EA+ L + +E TN P HI+
Sbjct: 385 LRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSI 444
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++G+ L A F + +G P+ TY ++ C + +A ++ EM + G
Sbjct: 445 VMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENG 504
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
PN TY+++ ++ T A +F+ M + G VST ++V M
Sbjct: 505 CSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR-GFSIDVSTTTLLVEML 554
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + +N LI LC + A +F +M PD+ +Y IL + +
Sbjct: 360 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 419
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + ++ +PD+ Y I+++ C A + A +LF ++ + P +
Sbjct: 420 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 479
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL + L+EA + FG+ + G P A TYN + + + A ++ EM G
Sbjct: 480 MINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRG 539
Query: 181 IGPNTRTYDIVLHHLIKAG 199
+ T +++ L G
Sbjct: 540 FSIDVSTTTLLVEMLSDDG 558
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 1/161 (0%)
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
I+DA + + M + P+ + +L + + S++K+M G T
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMD-SFGIPHNTYTLN 93
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
I++ FC+ ++ A + ++ G P ++TLI LC E K+ +A + F +M
Sbjct: 94 ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
G +P + L L G TA+ + +++ P V
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTV 194
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 160/311 (51%), Gaps = 1/311 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ DF++++ + KS++ + +F M+ D+ SY I++ + + V
Sbjct: 9 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 68
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPDVV+ +IN C R +A++L +ME +P I+ T+I+G
Sbjct: 69 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 128
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+++A++ F + ++ G +A TYN++V C S R +DA R+M +M I PN T+
Sbjct: 129 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 188
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
V+ +K G+ EA +++ M+R+ +P V TY ++ C + +VD A ++ D M
Sbjct: 189 TAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+G LP + Y+TLIN C ++D+ K F+EM G+ ++ + Q G +
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307
Query: 309 TAVVLAQKIDK 319
A + ++D
Sbjct: 308 AAQEIFSRMDS 318
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 154/319 (48%), Gaps = 4/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ +L +N +I+ LC+ A V KM K ++PD+ + + L+ G+ Q
Sbjct: 36 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 95
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M++ GF PDVV Y +I+ C ++AVELF ME + + +
Sbjct: 96 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 155
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL R S+A + R P T+ AV+ + + ++A ++ +EM +
Sbjct: 156 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 215
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ +++ L GR +EA + M K G P V TY ++ FC + +VD
Sbjct: 216 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK-GCLPDVVTYNTLINGFCKSKRVDEG 274
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ EM RG++ Y+T+I + D A + F M RP + +S L
Sbjct: 275 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYG 331
Query: 301 LRDEGMEETAVVLAQKIDK 319
L E A+VL + + K
Sbjct: 332 LCMNWRVEKALVLFENMQK 350
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 4/289 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G++ + +N L+ LC S A + M R P++ ++T +++ + ++
Sbjct: 141 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 200
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++Y EM +PDV +Y +IN C R DEA ++ M C P + T
Sbjct: 201 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 260
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING KR+ E + F + +RG + TYN ++ Y + R + A + M
Sbjct: 261 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS-- 318
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN RTY I+L+ L R E+A +F+ M +K E ++TY IV+ C V+ A
Sbjct: 319 -RPNIRTYSILLYGLCMNWRVEKALVLFENM-QKSEIELDITTYNIVIHGMCKIGNVEDA 376
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ + +G+ P + Y+T+I+ C + + D + +++M + G+ P
Sbjct: 377 WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F +ID K A +++++M +R DPD+ +Y L+ G + ++ M
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDVV+Y +IN C +KR DE +LFREM + T+I G R
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + R P TY+ ++ C + R+ A + + M+K I + TY+IV+
Sbjct: 308 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 364
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H + K G E+A+ +F+ +S K G +P V +Y ++ FC Q D + ++ +M+ G+
Sbjct: 365 HGMCKIGNVEDAWDLFRSLSCK-GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 423
Query: 253 LPV 255
LP+
Sbjct: 424 LPL 426
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 142/275 (51%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID CK V A+ V M K+ D+ +Y L++G+ K + ++ M
Sbjct: 271 FSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMA 330
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV SY IMIN C K DEA++LF EM P+ + +L++GL R S
Sbjct: 331 QRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTS 390
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL+ + RG TYN+++ A C + ++ A ++ ++++ GI P+ TY +++
Sbjct: 391 CALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLI 450
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K GR ++A VF+ + K G P + TY ++ FC D + + +MK G
Sbjct: 451 NGLCKVGRLDDAQKVFEDLLVK-GYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGC 509
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+P Y LI+SL +D+ D A K +EM+ G+
Sbjct: 510 IPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 157/305 (51%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +ID++CK + V A +++ +M +R PD+ +Y+ L+ G+ L +++ M
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI 260
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D P+V ++ I+I+ C + EA + M N K + +L++G K+++
Sbjct: 261 SDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVN 320
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F +RG P+ +Y+ ++ +C +++A ++ +EM I PN TY+ ++
Sbjct: 321 KAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLV 380
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+GRT A + M + G + TY ++ C N VD A+ + ++K +G+
Sbjct: 381 DGLCKSGRTSCALELVDEMHDR-GQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGI 439
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ LIN LC +LDDA K F+++L G P +++L ++G + +
Sbjct: 440 QPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLA 499
Query: 313 LAQKI 317
+ K+
Sbjct: 500 MLSKM 504
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 160/326 (49%), Gaps = 9/326 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + N L++ + H++ + VF K+ K+ + PD ++TIL++G + +
Sbjct: 88 GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKA 147
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ GF+ D VSYG +IN C AV+L R ++ +P+ ++ T+I+
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDS 207
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +K +++A + + + P+ TY++++ +C ++ A + + M I PN
Sbjct: 208 MCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPN 267
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ I++ K G+ EA +V M +K + V TY ++ +C QV+ A ++
Sbjct: 268 VYTFSILIDGFCKEGKVREAKNVLAVMMKK-NVKLDVVTYNSLMDGYCLVKQVNKAKSLF 326
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M RGV P + YS +IN C +D+A K F+EM I P +++L L
Sbjct: 327 NVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKS 386
Query: 305 GMEETAVVLAQKIDKLRKTPLVDRGQ 330
G A+ L ++ DRGQ
Sbjct: 387 GRTSCALELVDEMH--------DRGQ 404
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 150/302 (49%), Gaps = 1/302 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ ++ LI C ++ A ++F++M +P++ +++IL++G+ ++ + V
Sbjct: 232 DVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVL 291
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
M + DVV+Y +++ +C K+ ++A LF M P + +ING
Sbjct: 292 AVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKI 351
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
K + EA++ F + + P TYN++V C S R + A ++DEM G N TY
Sbjct: 352 KMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITY 411
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ +L + K ++A + ++ K G +P + TY +++ C ++D A ++++++
Sbjct: 412 NSILDAICKNNHVDKAIVLLTKIKEK-GIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLL 470
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+G P ++ Y++LIN C++ D+ +M D G P + L +L ++ +
Sbjct: 471 VKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDEND 530
Query: 309 TA 310
A
Sbjct: 531 KA 532
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 145/310 (46%), Gaps = 4/310 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD F LI LC V +A DK+ + F D SY L+ G + + ++
Sbjct: 126 PDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQL 185
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
R + P+VV Y +I++ C K ++A +L+ EM + P + +LI+G
Sbjct: 186 LRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCV 245
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+L A+ F + P T++ ++ +C ++ +A ++ M K + + T
Sbjct: 246 VGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVT 305
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y+ ++ + +A S+F M+++ G P V +Y I++ FC VD AM++++EM
Sbjct: 306 YNSLMDGYCLVKQVNKAKSLFNVMAQR-GVTPDVWSYSIMINGFCKIKMVDEAMKLFEEM 364
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+ + P + Y++L++ LC + A + EM D G ++++ A+
Sbjct: 365 HCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHV 424
Query: 308 ETAVVLAQKI 317
+ A+VL KI
Sbjct: 425 DKAIVLLTKI 434
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 109/211 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ ++ +I+ CK + V+ A ++F++M ++ P++ +Y L++G +
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM D G ++++Y +++A C D+A+ L +++ +P +
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTV 448
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL RL +A + F +G+ P TY +++ +C ++ M+ +M+ G
Sbjct: 449 LINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG 508
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
PN TY+I++H L + ++A + + M
Sbjct: 509 CIPNAITYEILIHSLFEKDENDKAEKLLREM 539
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 4/251 (1%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI-NGLGSEKRLSEALQ 136
P + +G ++ + AK+Y A+ L ++ME KP I C L+ N + +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPD-FITCNLLMNCFSQLGHIKFSFS 114
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
F + K+G+ P+A T+ ++ C ++ A D++ G + +Y +++ L
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
+ G T+ A + +R+ K P V Y ++ C + V+ A ++ EM ++ + P +
Sbjct: 175 RVGETKAAVQLLRRVDGKL-VRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDV 233
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQ 315
YS+LI+ C KL A F M+ I P FS L EG + E VLA
Sbjct: 234 VTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAV 293
Query: 316 KIDKLRKTPLV 326
+ K K +V
Sbjct: 294 MMKKNVKLDVV 304
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 169/324 (52%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ +K + ++ +ID+LCK + A +F++M+ + D+ +Y+ L+ G
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ REM PDVV++ +I+ + EA EL+ EM P + +
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G E L EA Q F +G EP+ TY+ ++ +YC + R++D R+ E+ G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT TY+ ++ ++G+ A +F+ M + G P+V TY I++ C N +++ A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKA 474
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I+++M+ + + +Y+ +I+ +C+ K+DDA F + D G++P ++ +
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +G A +L +K+ + TP
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTP 558
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 1/317 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+ +L + LI+ LC V A + D+M + F PD +Y +L + N +
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++R+M++ + VV Y I+I++ C +D+A+ LF EME K + +LI GL
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ + + + + R P+ T++A++ + ++ +A + +EM GI P+T
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++ K EA +F M K G EP + TY I++ +C +VD MR++ E
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
+ ++G++P Y+TL+ C KL+ A + FQEM+ G+ P + L L D G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 307 EETAVVLAQKIDKLRKT 323
A+ + +K+ K R T
Sbjct: 471 LNKALEIFEKMQKSRMT 487
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 154/293 (52%), Gaps = 7/293 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++G + + + +++ LCKS + A ++F KM++R + Y+I+++ + +
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM+ G + DVV+Y +I C+ ++D+ ++ REM N P F
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ E +L EA + + + RG P+ TYN+++ +C +++A +M D M G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY I+++ KA R ++ +F+ +S K G P TY +V FC + +++ A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDIGI 287
++ EM +RGV P + Y L++ LC +L+ A + F++M L IGI
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 153/303 (50%), Gaps = 4/303 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD F+ LID K + A+E++++M R PD +Y L++G+ ++ L N+
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 371
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M G EPD+V+Y I+IN++C AKR D+ + LFRE+ + P+ + TL+ G
Sbjct: 372 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 431
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+L+ A + F + RG P TY ++ C + +N A + ++M+K +
Sbjct: 432 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 491
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y+I++H + A + ++A+S+F +S K G +P V TY +++ C + A ++ +
Sbjct: 492 IYNIIIHGMCNASKVDDAWSLFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
MK G P Y+ LI + L + + +EM G + L D +
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRL 610
Query: 307 EET 309
+++
Sbjct: 611 DKS 613
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 149/300 (49%), Gaps = 1/300 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K ++ ++ LI LC + ++ +M R PD+ +++ L++ + ++
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+Y EM G PD ++Y +I+ C EA ++F M + C+P +
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN KR+ + ++ F + +G P TYN +V +C S ++N A + EM G
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G +A +F++M + T + Y I++ C ++VD A
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT-LGIGIYNIIIHGMCNASKVDDA 509
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I LC + L +A F++M + G P ++ L +A
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 137/286 (47%), Gaps = 1/286 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DFNRL + +++ + M+ + D+ + TI++ + ++K LL V
Sbjct: 72 DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRA 131
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G+EPD +++ ++N C R EAV L M +P TLINGL + R+
Sbjct: 132 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 191
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
SEAL + + GF+P+ TY V+ C S A + +M + I + Y IV
Sbjct: 192 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K G ++A S+F M K G + V TY ++ C + + D ++ EM R
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++P + +S LI+ E KL +A + + EM+ GI P +++L
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 117/263 (44%), Gaps = 36/263 (13%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + + + +A K+YD + + ME + + +IN +K+L A
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-----------------C- 179
G++ K G+EP+ T++ +V +C R+++A ++D M + C
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 180 -----------------GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
G P+ TY VL+ L K+G + A +F++M + + +V
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVV 246
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
Y IV+ C + D A+ +++EM+ +G+ + YS+LI LC++ K DD K +EM
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 283 LDIGIRPPGQLFSNLKQALRDEG 305
+ I P FS L EG
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEG 329
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +N L+ C+S + A+E+F +M R P + +Y ILL+G L
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 474
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ +M+ + Y I+I+ C+A + D+A LF + KP + +I G
Sbjct: 475 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 534
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + LSEA F + K+ G P+ TYN ++ A+ + + +++EM+ CG +
Sbjct: 535 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Query: 185 TRTYDIVLHHL 195
+ T +V+ L
Sbjct: 595 SSTIKMVIDML 605
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 158/344 (45%), Gaps = 33/344 (9%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID LCK ++ A VFD M + P++ +Y L+ G + + + + M
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PDV++Y ++++A C A R DEA+EL M + C P+ F ++I+GL R
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482
Query: 133 EALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-------KCGIG-- 182
EA Q F + K G P+ TY ++ + R A ++D M C I
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGL 542
Query: 183 ----------------------PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
P+ T++I++ KAG E+A ++F+ M K +P
Sbjct: 543 SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK-NLQPD 601
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V T+ ++ C QV+ A I D M GV P + Y+ L++ LC ++++AC++ +
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 661
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM+ G P + +L AL + A+ L ++ P
Sbjct: 662 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDP 705
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 152/287 (52%), Gaps = 9/287 (3%)
Query: 5 GLKQELPD-----FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
L +PD FN I+ L K V RA +V+++M + PD ++ IL+ G +
Sbjct: 522 ALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAG 581
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
N + ++ EM +PDV+++G +I+ C A + + A ++ M P+ +
Sbjct: 582 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 641
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L++GL R+ EA QF + G P++ TY ++V A C + R +DA +++ E++
Sbjct: 642 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 701
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+T TY+I++ L K+G+TE+A +V + M K G P V TY ++ C ++
Sbjct: 702 GWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGK-GHHPDVVTYNTLIDSLCKAGDLEE 760
Query: 240 AMRIWDEMK---ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
A R+ +M +R +P + YS LIN LC ++D+A + QEM+
Sbjct: 761 ARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMM 807
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 163/311 (52%), Gaps = 8/311 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N +I+ LCKS + E+F+++ +R PD+ +Y L++ + +
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 266
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--F 118
L ++ +M P+VV+Y ++IN C R DEA EL +EM +C P+I +
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 326
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRG---FEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ ++GL + +EA + +S + G P+ T++ ++ C +I++A + D+
Sbjct: 327 NSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 385
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M G PN TY+ +++ L KA + E A+++ + M K G P V TY ++V FC +
Sbjct: 386 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK-GVTPDVITYSVLVDAFCKAS 444
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM-LDIGIRPPGQLF 294
+VD A+ + M +RG P + ++++I+ LC D+ +A + F +M L G+ P +
Sbjct: 445 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITY 504
Query: 295 SNLKQALRDEG 305
L L G
Sbjct: 505 CTLIDGLFRTG 515
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 160/363 (44%), Gaps = 43/363 (11%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L+ ++ F LID LCK+ VE A+++ D M P++ +Y L+ G + +
Sbjct: 598 LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEAC 657
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ EM G PD ++YG ++ A C A R D+A++L E+++ P + L++GL
Sbjct: 658 QFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGL 717
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR----KCGI 181
+ +A+ + +G P+ TYN ++ + C + + +A R+ +M +C +
Sbjct: 718 WKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCV 777
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG------------------------- 216
PN TY ++++ L K GR +EA + + M RK
Sbjct: 778 -PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA 836
Query: 217 -------------TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
P T+ ++ C Q D A ++D+M A G +P + Y+ L+
Sbjct: 837 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLM 896
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
N LC DK++ A + M+D G+ P +S L A + A+ L + T
Sbjct: 897 NGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCT 956
Query: 324 PLV 326
P V
Sbjct: 957 PNV 959
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 5/280 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GL + + LID L ++ +A+ + D M DPD ++ + G + ++
Sbjct: 494 KHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVS 549
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+VY M + PD V++ I+I C A +++A LF EM A N +P F LI
Sbjct: 550 RALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 609
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL ++ A G P TYNA+V C S RI +A + ++EM G
Sbjct: 610 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV 669
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P++ TY +++ L +A RT++A + + + G +P TY I+V + Q + A+
Sbjct: 670 PDSITYGSLVYALCRASRTDDALQLVSEL-KSFGWDPDTVTYNILVDGLWKSGQTEQAIT 728
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ +EM +G P + Y+TLI+SLC L++A + +M
Sbjct: 729 VLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM 768
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 150/337 (44%), Gaps = 33/337 (9%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L++ LCK+ +ERA + + M + PD+ +Y++L++ + + + E+ M
Sbjct: 398 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 457
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM---------EATNCK----------- 112
G P+VV++ +I+ C + R EA ++F +M + T C
Sbjct: 458 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRA 517
Query: 113 ------------PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
P + F INGL +S ALQ + + + P+ T+N ++
Sbjct: 518 GQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGA 577
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C + A + +EM + P+ T+ ++ L KAG+ E A + M G P
Sbjct: 578 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL-GVPPN 636
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V TY +V C + +++ A + +EM + G +P Y +L+ +LC + DDA +
Sbjct: 637 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 696
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
E+ G P ++ L L G E A+ + +++
Sbjct: 697 ELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEM 733
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 8/288 (2%)
Query: 45 IKSYTILLEGWGQQKNLLSMNEVYR-EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
+ Y I+L+ + E++R EM DG P +V+Y +IN C + +ELF
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
E+ P + TLI+ L L EA + G R P TY+ ++ C
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 164 MRINDAYRMMDEM--RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT---E 218
RI++A ++ EM + C + PN TY+ L L K T EA + + S + G+
Sbjct: 300 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR--SLRDGSLRVS 357
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P T+ ++ C Q+D A ++D+M A G +P + Y+ L+N LC DK++ A
Sbjct: 358 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 417
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+ M+D G+ P +S L A + A+ L + TP V
Sbjct: 418 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV 465
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 35/333 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQKNLLSMNEVYRE 70
++ LI+ LCK ++ A+E+ +M ++ D P+I +Y L+G +Q E+ R
Sbjct: 289 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 348
Query: 71 MKDDGF--EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
++D PD V++ +I+ C + DEA +F +M A P+ + L+NGL
Sbjct: 349 LRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKA 408
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ A +G P+ TY+ +V A+C + R+++A ++ M G PN T+
Sbjct: 409 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTF 468
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF----------------- 231
+ ++ L K+ R+ EA+ +F M+ K G P TY ++
Sbjct: 469 NSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP 528
Query: 232 ---------CYN-----AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
C N V A+++++ M ++P ++ LI C + A
Sbjct: 529 DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASA 588
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
F+EM+ ++P F L L G E A
Sbjct: 589 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 621
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 9/262 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID LCK + A VFD M + P++ +Y +L+ G + + + + M
Sbjct: 857 FSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMV 916
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PDV++Y ++++A C A DEA+EL M + C P+ F ++I+GL +
Sbjct: 917 DKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSG 976
Query: 133 EALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA Q F + K G P+ TY ++ + A ++D M P+T ++
Sbjct: 977 EAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCC 1032
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ L K G A + P T+ I++ C + A +++EM A+
Sbjct: 1033 INGLSKLGDVSRALHRMLELELVPDK----VTFNILIAGACKAGNFEQASALFEEMVAKN 1088
Query: 252 VLPVMHMYSTLINSLCHEDKLD 273
+ P + + LI+ LC +++
Sbjct: 1089 LQPDVMTFGALIDGLCKAGQVE 1110
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 11/309 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQKNLLSMNEVYRE 70
++ LI+ LCK ++ A+E+ +M ++ D P+I +Y L+G +Q + E+ R
Sbjct: 783 YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842
Query: 71 MKDDGF--EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
++D PD V++ +I+ C + DEA +F +M A P+ + L+NGL
Sbjct: 843 LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKT 902
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ A +G P+ TY+ +V A+C + +++A ++ M G PN T+
Sbjct: 903 DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTF 962
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ L K+ ++ EA+ +F M+ K G P TY ++ A + D M
Sbjct: 963 NSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP 1022
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
P + ++ IN L KL D + ML++ + P F+ L G E
Sbjct: 1023 D----PDTYAFNCCINGL---SKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFE 1075
Query: 309 TAVVLAQKI 317
A L +++
Sbjct: 1076 QASALFEEM 1084
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ L+D CK+ HV+ A E+ M R P++ ++ +++G +
Sbjct: 919 GVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEA 978
Query: 65 NEVYREMK-DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+++ +M G PD ++Y +I+ +A L M P + F IN
Sbjct: 979 FQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCIN 1034
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL +S AL + + P+ T+N ++ C + A + +EM + P
Sbjct: 1035 GLSKLGDVSRALHRMLELE---LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 1091
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVF 208
+ T+ ++ L KAG+ E + +
Sbjct: 1092 DVMTFGALIDGLCKAGQVEATWDIM 1116
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 19/290 (6%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+K L+ PD FN L+D CK R ++ + VF M K+ PD+ +Y L++G+
Sbjct: 253 FNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCL 312
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K + + ++ M G PD+ SY I+IN C K+ D+A+ LF EM N P+
Sbjct: 313 VKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVT 372
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LI+GL R+S ALQ Q RG P TYN+++ A + +++ A ++ + +
Sbjct: 373 YNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFK 432
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI P+ TY I++ L K E Y + TV+TY +++ FC
Sbjct: 433 DQGIQPSMYTYTILIDGLCKV----EGYDI------------TVNTYNVMIHGFCKKGLF 476
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
D A+ + +MK +P Y I SL ++ D A K F+EM+ G+
Sbjct: 477 DEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGL 526
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 156/327 (47%), Gaps = 2/327 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + + LI LCK A ++ ++ + + Y ++ G + K++
Sbjct: 154 LGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVND 213
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y EM G P+VV+Y +I+ + +A++LF ++ N KP + F L++
Sbjct: 214 AFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD 273
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G ++++ E F K+G P+ TYN+++ YC +N A + + M + G+ P
Sbjct: 274 GFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNP 333
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ R+Y+I+++ K + ++A ++F M K P V TY ++ + ++ A+++
Sbjct: 334 DIRSYNILINGFCKIKKVDKAMNLFNEMHCK-NIIPNVVTYNSLIDGLSKSGRISYALQL 392
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-R 302
D+M RGV P + Y+++I++L ++D A + D GI+P ++ L L +
Sbjct: 393 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 452
Query: 303 DEGMEETAVVLAQKIDKLRKTPLVDRG 329
EG + T I K L D
Sbjct: 453 VEGYDITVNTYNVMIHGFCKKGLFDEA 479
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 158/338 (46%), Gaps = 21/338 (6%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL-LSMNEVYR- 69
+FN+++ +L KS+H + KM+ R P++ + IL+ + Q + +++ +
Sbjct: 88 EFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLF 147
Query: 70 --EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
++ GF D VSYG +I+ C A++L + ++ + + ++ T+I G+
Sbjct: 148 HDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCK 207
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+K +++A + + +G P TY+A++ + ++ DA + +++ I P+ T
Sbjct: 208 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYT 267
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++I++ K + +E +VF M K G P V TY ++ +C +V+ A I++ M
Sbjct: 268 FNILVDGFCKDRKMKEGKTVFAMM-MKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTM 326
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
GV P + Y+ LIN C K+D A F EM I P +++L L G
Sbjct: 327 AQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRI 386
Query: 308 ETAVVLAQK----------------IDKLRKTPLVDRG 329
A+ L + ID L KT VD+
Sbjct: 387 SYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKA 424
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 145/316 (45%), Gaps = 5/316 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSR----HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
G+K L + N LI C+ + +A DK+ F D SY L+ G +
Sbjct: 116 GIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGE 175
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + + + + V Y +I C K ++A +L+ EM + P+ +
Sbjct: 176 TRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSA 235
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +L +A+ F + +P+ T+N +V +C ++ + + M K G
Sbjct: 236 LISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQG 295
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ ++ A S+F M++ G P + +Y I++ FC +VD A
Sbjct: 296 IIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQG-GVNPDIRSYNILINGFCKIKKVDKA 354
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M +++EM + ++P + Y++LI+ L ++ A + +M D G+ P ++++ A
Sbjct: 355 MNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDA 414
Query: 301 LRDEGMEETAVVLAQK 316
L + A+ L K
Sbjct: 415 LFKTHQVDKAIALITK 430
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 16/253 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ ++ +N L+D C + V A+ +F+ M + +PDI+SY IL+ G+ + K
Sbjct: 291 MMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKK 350
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM P+VV+Y +I+ + R A++L +M P+ + +
Sbjct: 351 VDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNS 410
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ +A+ + K +G +P TY ++ C + G
Sbjct: 411 IIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC---------------KVEG 455
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TY++++H K G +EA S+ +M + P TYEI +R N + D A
Sbjct: 456 YDITVNTYNVMIHGFCKKGLFDEALSLLSKM-KDSSCIPNAVTYEITIRSLLDNNENDKA 514
Query: 241 MRIWDEMKARGVL 253
+++ EM RG+L
Sbjct: 515 EKLFREMITRGLL 527
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 102/241 (42%), Gaps = 6/241 (2%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
+ +SY S D+AV LF + N P F ++ L K L
Sbjct: 50 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109
Query: 139 GQSKKRGFEPEAPTYNAVVGAYC----WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ + RG +P N ++ +C +I+ A+ D++ G + +Y ++H
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K G T A + +R+ K + Y V+ C + V+ A ++ EM ++G+ P
Sbjct: 170 LCKVGETRAALDLLQRVDGKL-VQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISP 228
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVL 313
+ YS LI+ KL DA F +++ I+P G F+ L +D M+E V
Sbjct: 229 NVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVF 288
Query: 314 A 314
A
Sbjct: 289 A 289
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ +N LI+ CK + V++A +F++M + P++ +Y L++G +
Sbjct: 326 MAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGR 385
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M D G P++++Y +I+A + D+A+ L + + +PS + +
Sbjct: 386 ISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTI 445
Query: 121 LINGL------------------GSEKR--LSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
LI+GL G K+ EAL + K P A TY + +
Sbjct: 446 LIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSL 505
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ + A ++ EM G+ + +Y
Sbjct: 506 LDNNENDKAEKLFREMITRGLLNRSASY 533
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +ID L K+ V++A + K K + P + +YTIL++G
Sbjct: 400 GVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGL--------- 450
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
K +G++ V +Y +MI+ C +DEA+ L +M+ ++C P+ + I
Sbjct: 451 ------CKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRS 504
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
L +A + F + RG + +Y C SM+I+ + M+
Sbjct: 505 LLDNNENDKAEKLFREMITRGLLNRSASYP------CSSMKIHQSLTMV 547
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 155/290 (53%), Gaps = 1/290 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK V +A++V + + P Y L+ G+ Q ++L ++ +MK
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 221
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PD ++Y +IN C + +A +L EME + PS F TLI+ G+ +L +
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 281
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+++G + + ++ +VV A+C + +I +A ++D+M + PN + Y+ ++
Sbjct: 282 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 341
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
I++G TE+A+ + ++M + G ++ TY ++++ C ++Q+D A + ++ +G+ P
Sbjct: 342 IESGDTEQAFLLVEKM-KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 400
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ Y+T+I++ C++ D A + QEM GIRP + + L AL G
Sbjct: 401 VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 450
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 141/296 (47%), Gaps = 1/296 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +N LI+ C+ R + A +F++MK R PD +Y L+ G + + +
Sbjct: 186 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 245
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM+ G +P V ++ +I+A+ +A + ++ + +M+ K F +++
Sbjct: 246 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 305
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ EA+ + P A YN+++ AY S A+ ++++M+ G+ +
Sbjct: 306 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 365
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+++L L ++ + +EA + + R G P V +Y ++ C D A+ +
Sbjct: 366 IVTYNLLLKGLCRSSQIDEAEELIYTL-RNQGLRPDVVSYNTIISACCNKGDTDKALELL 424
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
EM G+ P + Y TL+++L ++ D +Q+ML + P ++ + A
Sbjct: 425 QEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 480
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 160/355 (45%), Gaps = 36/355 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N L+ LC++ ++ + + D+M PD +Y+IL +G + +M
Sbjct: 81 GPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTM 140
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ E G + I++N C + +A ++ + T P+ I+ TLING
Sbjct: 141 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 200
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L A F Q K R P+ TYNA++ C + A ++ EM K G+ P+
Sbjct: 201 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 260
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ AG+ E+ ++V M +K G + V ++ VV+ FC N ++ A+ I
Sbjct: 261 VETFNTLIDAYGTAGQLEKCFTVLSDMQQK-GIKSDVISFGSVVKAFCKNGKIPEAVAIL 319
Query: 245 DEMKARGVLPVMHMYSTLINS-----------------------------------LCHE 269
D+M + V P +Y+++I++ LC
Sbjct: 320 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRS 379
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++D+A + + + G+RP ++ + A ++G + A+ L Q+++K P
Sbjct: 380 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 434
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 132/275 (48%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ LCK V +A+++ +M+K DP ++++ L++ +G L V +M+
Sbjct: 229 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 288
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + DV+S+G ++ A C + EAV + +M + P+ ++ ++I+
Sbjct: 289 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTE 348
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + K G TYN ++ C S +I++A ++ +R G+ P+ +Y+ ++
Sbjct: 349 QAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 408
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
G T++A + + M+ K G PT+ TY +V +V ++ +M + V
Sbjct: 409 SACCNKGDTDKALELLQEMN-KYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNV 467
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
P +Y ++++ + +EM + GI
Sbjct: 468 EPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 148/340 (43%), Gaps = 36/340 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I L +S A +VFD+M P+ +Y +++G + +L + + +M
Sbjct: 19 YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 78
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG +P++V+Y ++++ C A R DE L EM + + P + L +GL
Sbjct: 79 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 138
Query: 133 EALQFFGQSKKR-----------------------------------GFEPEAPTYNAVV 157
L F +S K+ G P YN ++
Sbjct: 139 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 198
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + A+ + ++M+ I P+ TY+ +++ L K +A + M K G
Sbjct: 199 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM-EKSGV 257
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P+V T+ ++ + Q++ + +M+ +G+ + + +++ + C K+ +A
Sbjct: 258 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 317
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+M+ + P Q+++++ A + G E A +L +K+
Sbjct: 318 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 4/290 (1%)
Query: 43 PDIKSYTILLEG-WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
PD SY +++ G W K ++ +V+ EM D G P+ ++Y MI+ H +
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDAL-KVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L +M KP+ + L++GL R+ E + P+ TY+ +
Sbjct: 73 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ + E K G+ T I+L+ L K G+ +A V + M G PT
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE-MLVHTGLVPTT 191
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
Y ++ +C + A I+++MK+R + P Y+ LIN LC + + A E
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 251
Query: 282 MLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTPLVDRGQ 330
M G+ P + F+ L A G +E+ VL+ K K+ ++ G
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 301
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 104/252 (41%), Gaps = 36/252 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ F ++ CK+ + A + D M + P+ + Y +++ + + +
Sbjct: 287 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 346
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +MK+ G +V+Y +++ C + + DEA EL +
Sbjct: 347 TEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL-------------- 392
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ +G P+ +YN ++ A C + A ++ EM K G
Sbjct: 393 ---------------------RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P RTY ++ L AGR + ++++M K EP+ S Y I+V +
Sbjct: 432 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK-NVEPSSSIYGIMVDAYVRCENDSKV 490
Query: 241 MRIWDEMKARGV 252
+ EM +G+
Sbjct: 491 ASLKKEMSEKGI 502
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 157/306 (51%), Gaps = 4/306 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G K + F+ +I +L K R AQ FD +K R F+PD+ YT L+ GW + N
Sbjct: 1239 MEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLVHGWCRAGN 1297
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ EMK G P+V +Y I+I+A C + + A ++F EM C P+ F
Sbjct: 1298 ISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNN 1357
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ R + LQ + Q K+ G P+A TYN ++ ++C + +A ++++ ++K G
Sbjct: 1358 LMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK-G 1416
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N +++ + + K G A+ +F +M + P TY I++RMF DM
Sbjct: 1417 CNLNASSFNPIFGCISKLGDVNSAHRMFAKM-KDLKCRPNTVTYNILMRMFADKKSTDMV 1475
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML-DIGIRPPGQLFSNLKQ 299
+++ EM + P + Y LI++ C ++A +F+EM+ + +RP ++ + Q
Sbjct: 1476 LKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQ 1535
Query: 300 ALRDEG 305
LR G
Sbjct: 1536 QLRKAG 1541
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 158/319 (49%), Gaps = 5/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++FG E + +ID K R + A ++ D MK R + ++++TIL+ + +
Sbjct: 1171 LEEFGHSPE--PYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGL 1228
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M+D G +PD +++ ++I++ +R EA F ++ +P ++ +
Sbjct: 1229 AAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLK-DRFEPDVVVYTS 1287
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G +SEA + FG+ K G P TY+ V+ A C S +I A+ + EM G
Sbjct: 1288 LVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVG 1347
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T++ ++ +KAGRTE+ V+ +M R G P TY ++ C + ++ A
Sbjct: 1348 CDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRL-GCPPDAITYNFLIESHCRDDNLEEA 1406
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++I + +K +G ++ + + ++ A + F +M D+ RP ++ L +
Sbjct: 1407 VKILNSVK-KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRM 1465
Query: 301 LRDEGMEETAVVLAQKIDK 319
D+ + + L +++D+
Sbjct: 1466 FADKKSTDMVLKLRKEMDE 1484
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
SP + +I+ G ++ A Q K R E T+ +V Y + +A
Sbjct: 1177 SPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTILVRRYVKAGLAAEAVHAF 1236
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ M G P+ + +V+ L K R EA S F S K EP V Y +V +C
Sbjct: 1237 NRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFD--SLKDRFEPDVVVYTSLVHGWCR 1294
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+ A R++ EMK G+ P ++ YS +I++LC ++ A F EM+D+G P
Sbjct: 1295 AGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAIT 1354
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+NL + G E + + ++ +L P
Sbjct: 1355 FNNLMRVHVKAGRTEKVLQVYNQMKRLGCPP 1385
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 161/316 (50%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + ++ LI LC A + M +R+ +PD+ +++ L++ + ++
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++Y EM +P +V+Y +IN C R DEA ++F M + +C P + T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + +RG TYN ++ + + A + EM G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +L L K G+ E+A VF+ + R EPT+ TY I++ C +V+
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+T+I+ C + ++A F+EM + G P ++ L +A
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 301 -LRDEGMEETAVVLAQ 315
LRD E +A ++ +
Sbjct: 581 RLRDGDREASAELIKE 596
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 143/276 (51%), Gaps = 1/276 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +L + +++ LCK + A + +KM++ + +P + Y +++G + K++
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G P+VV+Y +I+ C+ R+ +A L +M P F LI+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + KR +P TY++++ +C R+++A +M + M P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ K R EE VF+ MS++ TV TY I+++ DMA I+
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGDCDMAQEIF 454
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
EM + GV P + Y+TL++ LC KL+ A F+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 154/311 (49%), Gaps = 13/311 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQKNLLSMNE 66
+N +ID LCK +H++ A +F +M+ + P++ +Y+ L+ W LLS
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS--- 315
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+M + PDV ++ +I+A + EA +L+ EM + PS + +LING
Sbjct: 316 ---DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL EA Q F + P+ TYN ++ +C R+ + + EM + G+ NT
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+I++ L +AG + A +FK M G P + TY ++ C N +++ AM +++
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMV-SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
++ + P ++ Y+ +I +C K++D F + G++P ++ + +G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 307 EETAVVLAQKI 317
+E A L +++
Sbjct: 552 KEEADALFKEM 562
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 156/322 (48%), Gaps = 1/322 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + FN LI L A + D+M + PD+ +Y +++ G ++ +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M+ EP V+ Y +I+ C K D+A+ LF+EME +P+ + +LI+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R S+A + +R P+ T++A++ A+ ++ +A ++ DEM K I P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ R +EA +F+ M K P V TY +++ FC +V+ M ++
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKH-CFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM RG++ Y+ LI L D A + F+EM+ G+ P ++ L L
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 305 GMEETAVVLAQKIDKLRKTPLV 326
G E A+V+ + + + + P +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTI 501
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID K + A++++D+M KR DP I +Y+ L+ G+ L +++ M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDVV+Y +I C KR +E +E+FREM + + LI GL
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G P TYN ++ C + ++ A + + +++ + P TY+I++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAG+ E+ + +F +S K G +P V Y ++ FC + A ++ EMK G
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
LP Y+TLI + + + + + +EM G + L D ++++
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 141/312 (45%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ LI+ C+ + A V KM K ++P+I + + LL G+ K
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M G++P+ V++ +I+ + EA+ L M A C+P +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL A + ++ EP YN ++ C ++DA + EM G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY ++ L GR +A + M + P V T+ ++ F ++ A
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEA 345
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++DEM R + P + YS+LIN C D+LD+A + F+ M+ P ++ L +
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 301 L-----RDEGME 307
+EGME
Sbjct: 406 FCKYKRVEEGME 417
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 143/286 (50%), Gaps = 1/286 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+F++L+ + K + + ++M+ + +Y+IL+ + ++ L V +M
Sbjct: 83 EFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM 142
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G+EP++V+ ++N +C +KR EAV L +M T +P+ F TLI+GL +
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
SEA+ + +G +P+ TY VV C + A+ ++++M + + P Y+ +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K ++A ++FK M K G P V TY ++ C + A R+ +M R
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ P + +S LI++ E KL +A K + EM+ I P +S+L
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A +F +M K R P I ++ LL + + + +M++ G + +Y I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C + A+ + +M +P+ +L+NG KR+SEA+ Q G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++P T+N ++ + ++A ++D M G P+ TY +V++ L K G T+ A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ +M + EP V Y ++ C +D A+ ++ EM+ +G+ P + YS+LI+
Sbjct: 242 NLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC+ + DA + +M++ I P FS L A EG
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 116/249 (46%), Gaps = 36/249 (14%)
Query: 92 SAKRYDEAVELFREMEATNCKPS--------------------------------PH--- 116
S + D+AV LF EM + PS PH
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ LIN +L AL G+ K G+EP T ++++ YC S RI++A ++D+M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G PNT T++ ++H L + EA ++ RM K G +P + TY +VV C
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK-GCQPDLVTYGVVVNGLCKRGD 236
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
D+A + ++M+ + P + +Y+T+I+ LC +DDA F+EM GIRP +S+
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 297 LKQALRDEG 305
L L + G
Sbjct: 297 LISCLCNYG 305
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+D LCK+ +E+A VF+ +++ + +P I +Y I++EG + +
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + G +PDVV+Y MI+ C +EA LF+EM+ P+ + TLI
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+ + + + + GF +A T V
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 2/204 (0%)
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL SE +L +A+ FG+ K P ++ ++ A + + + ++M+ GI
Sbjct: 55 NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
N TY I+++ + + A +V +M K G EP + T ++ +C++ ++ A+
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKM-MKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D+M G P ++TLI+ L +K +A M+ G +P + + L
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 303 DEGMEETAVVLAQKIDKLRKTPLV 326
G + A L K+++ + P V
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGV 256
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N +I C+ E A +F +MK+ P+ Y L+ + + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 65 NEVYREMKDDGFEPDVVSYGIMIN 88
E+ +EM+ GF D + G++ N
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTN 614
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 160/321 (49%), Gaps = 7/321 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ + K + F+ LI LC+ R AQ FD +K + F+PD+ YT L+ GW + N
Sbjct: 203 MEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK-FEPDVIVYTNLVRGWCRAGN 261
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ EMK G P+V +Y I+I+A C + A ++F EM C+P+ F
Sbjct: 262 IPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNN 321
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ R + LQ + Q K+ G P+ TYN ++ ++C +++A ++++ M K G
Sbjct: 322 LLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKG 381
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T++ + + K A+ ++ +M TV TY I++RMF DM
Sbjct: 382 CSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTV-TYNILMRMFVDTKSTDMV 440
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML-DIGIRPPGQLFSNLKQ 299
+++ EM V P ++ Y LI C ++A K+F+EM+ + ++P ++ + Q
Sbjct: 441 LKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQ 500
Query: 300 ALRDEGM----EETAVVLAQK 316
LR G EE V+ +
Sbjct: 501 QLRKAGQLKKHEELVAVMVDR 521
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 150/323 (46%), Gaps = 2/323 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G +N +ID K R+ + +V D MK R + I++++IL+ + +
Sbjct: 137 GFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEA 196
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M+D +PD +++ I+I+ C +R EA F ++ +P ++ L+ G
Sbjct: 197 VHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLK-DKFEPDVIVYTNLVRG 255
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EA + F + K G P TY V+ A C +I A+ + EM G PN
Sbjct: 256 WCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPN 315
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ T++ +L +KAGRTE+ V+ +M R G P TY ++ C + +D A+++
Sbjct: 316 SITFNNLLRVHVKAGRTEKVLQVYNQMKRM-GCPPDTVTYNFLIESHCKDGNLDEALKVL 374
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M +G P ++ L S+ ++ A + + +M ++ + ++ L + D
Sbjct: 375 NSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDT 434
Query: 305 GMEETAVVLAQKIDKLRKTPLVD 327
+ + L +++D+ P V+
Sbjct: 435 KSTDMVLKLKKEMDEDDVEPNVN 457
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 14/269 (5%)
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS-------P 115
S++ + P +VS+ I C+A R+ + F+ + N S P
Sbjct: 88 SLSLDFSHFSTSPVSPSLVSHVI---EKCAAVRH--GIPFFQALSFFNWATSRPGFTHHP 142
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ +I+ G + Q K R E T++ ++ Y + ++A +
Sbjct: 143 EPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNR 202
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M P+ + I++ L + R EA S F + K EP V Y +VR +C
Sbjct: 203 MEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDK--FEPDVIVYTNLVRGWCRAG 260
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+ A R++ EMK G +P ++ Y+ +I++LC ++ A F EMLD+G P F+
Sbjct: 261 NIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFN 320
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTP 324
NL + G E + + ++ ++ P
Sbjct: 321 NLLRVHVKAGRTEKVLQVYNQMKRMGCPP 349
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 162/306 (52%), Gaps = 3/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G K + F+ +I +LCK R A+ FD +K +F+PD+ YT L+ GW + +
Sbjct: 204 MEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLK-HKFEPDVIVYTSLVHGWCRAGD 262
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EV+ +MK+ G +P+V +Y I+I++ C + A ++F EM C P+ F +
Sbjct: 263 IAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNS 322
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ R + LQ + Q K+ G + +YN ++ ++C +++A +++D M K G
Sbjct: 323 LMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKG 382
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T++ + + + A+ ++ +M ++ P TY I++RMF + +DM
Sbjct: 383 VAPNASTFNSIFGCIAELHDVNGAHRMYAKM-KELKCMPNTLTYNILMRMFADSKSIDMV 441
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML-DIGIRPPGQLFSNLKQ 299
+++ EM V P ++ Y LI C + ++A +EM+ + ++P ++ + +
Sbjct: 442 LKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLE 501
Query: 300 ALRDEG 305
LR+ G
Sbjct: 502 LLRNAG 507
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 156/323 (48%), Gaps = 2/323 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G +N +ID K RH + A + D MK R + ++++L+ + +
Sbjct: 138 GFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVLVRRYVRAGLAAEA 197
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M+D G +PD VS+ I+I++ C +R EA ELF + +P ++ +L++G
Sbjct: 198 VHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEA-ELFFDSLKHKFEPDVIVYTSLVHG 256
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+++A + F K+ G +P TY+ V+ + C +I A+ + EM G PN
Sbjct: 257 WCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPN 316
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ +KAGRTE+ V+ +M R T+S Y ++ C + +D A+++
Sbjct: 317 AVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTIS-YNFLIESHCKDENLDEAVKVL 375
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D M +GV P ++++ + ++ A + + +M ++ P ++ L + D
Sbjct: 376 DTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADS 435
Query: 305 GMEETAVVLAQKIDKLRKTPLVD 327
+ + L +++D+ P V+
Sbjct: 436 KSIDMVLKLKKEMDESEVEPNVN 458
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 121/253 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K + ++ +ID+LC+ + RA +VF +M DP+ ++ L+ +
Sbjct: 273 MKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGR 332
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +VY +MK G D +SY +I +HC + DEAV++ M P+ F +
Sbjct: 333 TEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNS 392
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ + ++ A + + + K+ P TYN ++ + S I+ ++ EM +
Sbjct: 393 IFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESE 452
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY I++ + G AY++ K M + +P +S YE V+ + Q+
Sbjct: 453 VEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKH 512
Query: 241 MRIWDEMKARGVL 253
+ ++M ARG +
Sbjct: 513 EELVEKMVARGFV 525
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 164/319 (51%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ +L FN +I+ C V A + KM K ++PD + L+ G+ ++
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G++PD+V+Y +I++ C KR ++A + F+E+E +P+ +
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL + R S+A + K+ P TY+A++ A+ + ++ +A + +EM +
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY +++ L R +EA +F M K G V +Y ++ FC +V+
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVEDG 349
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+++ EM RG++ Y+TLI +D A ++F +M GI P ++ L
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 301 LRDEGMEETAVVLAQKIDK 319
L D G E A+V+ + + K
Sbjct: 410 LCDNGELEKALVIFEDMQK 428
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 155/316 (49%), Gaps = 1/316 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ DFNRL+ + K + + + KM+ D+ ++ I++ + + +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPD V+ G ++N C R +AV L +M KP + +I+ L
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
KR+++A FF + +++G P TY A+V C S R +DA R++ +M K I PN TY
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+L +K G+ EA +F+ M R +P + TY ++ C + ++D A +++D M
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
++G L + Y+TLIN C +++D K F+EM G+ ++ L Q G +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 309 TAVVLAQKIDKLRKTP 324
A ++D +P
Sbjct: 383 KAQEFFSQMDFFGISP 398
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 160/312 (51%), Gaps = 13/312 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + G K ++ +N +ID+LCK++ V A + F +++++ P++ +YT L+ G
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W LLS +M P+V++Y +++A + EA ELF EM + P
Sbjct: 241 WSDAARLLS------DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +LINGL R+ EA Q F +G + +YN ++ +C + R+ D ++
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM + G+ NT TY+ ++ +AG ++A F +M G P + TY I++ C N
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDN 413
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+++ A+ I+++M+ R + + Y+T+I +C K+++A F + G++P +
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 295 SNLKQALRDEGM 306
+ + L +G+
Sbjct: 474 TTMMSGLCTKGL 485
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 143/282 (50%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++ G++ + + L++ LC S A + M K++ P++ +Y+ LL+ + +
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L E++ EM +PD+V+Y +IN C R DEA ++F M + C + T
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING KR+ + ++ F + +RG TYN ++ + + ++ A +M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+I+L L G E+A +F+ M ++ + + TY V+R C +V+ A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE-MDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ + +G+ P + Y+T+++ LC + L + + +M
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L+D K+ V A+E+F++M + DPDI +Y+ L+ G + N+++ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G DVVSY +IN C AKR ++ ++LFREM + + TLI G +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A +FF Q G P+ TYN ++G C + + A + ++M+K + + TY V+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K G+ EEA+S+F +S K G +P + TY ++ C + ++ +MK G+
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 253 L 253
+
Sbjct: 502 M 502
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 135/272 (49%), Gaps = 1/272 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
RL T + + A ++F M K R P I + LL + K + + ++M+
Sbjct: 55 RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G D+ ++ I+IN C + A+ + +M +P +L+NG R+S+A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ + + G++P+ YNA++ + C + R+NDA+ E+ + GI PN TY +++
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L + R +A + M +K T P V TY ++ F N +V A +++EM + P
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKIT-PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+ YS+LIN LC D++D+A + F M+ G
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+ ++A++LF +M + PS F L++ + K+ + + + G + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
V+ +C +++ A ++ +M K G P+ T +++ + R +A S+ +M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-E 183
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G +P + Y ++ C +V+ A + E++ +G+ P + Y+ L+N LC+ + D
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A + +M+ I P +S L A G
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNG 274
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 4/197 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N LI+ CK++ VE ++F +M +R + +Y L++G+ Q ++
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + +M G PD+ +Y I++ C ++A+ +F +M+ + T+I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ EA F +G +P+ TY ++ C +++ + +M++ G+ N
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Query: 185 TRTY---DIVLH-HLIK 197
T DI L LIK
Sbjct: 505 DCTLSDGDITLSAELIK 521
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L++A+ F K P +N ++ A + + + +M GI + T++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
IV++ + A S+ +M K G EP T +V FC +V A+ + D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G P + Y+ +I+SLC +++DA +F+E+ GIRP ++ L L +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 310 AVVLAQKIDKLRKTPLV 326
A L + K + TP V
Sbjct: 244 AARLLSDMIKKKITPNV 260
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 156/316 (49%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L F+ LI ++RH+++A F MKK PD YT+L+ G+ + N+L
Sbjct: 253 GVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEA 312
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM + G DV++Y ++N C K +A +LF EM P + F TLI+G
Sbjct: 313 LKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHG 372
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +++AL FG +R +P+ YN ++ +C + A + D M I PN
Sbjct: 373 HCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPN 432
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+++ G EA+ ++ M K G +PT+ T V++ +C + A
Sbjct: 433 HITYGILINAYCSVGHVSEAFRLWDVMIEK-GIKPTLVTCNTVIKGYCRSGDSSKADEFL 491
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M A+GV P Y+TLIN ED +D A + +M G+ P ++ + +
Sbjct: 492 GRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQ 551
Query: 305 G-MEETAVVLAQKIDK 319
G M+E +VL + I+K
Sbjct: 552 GRMQEAELVLRKMIEK 567
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 139/286 (48%), Gaps = 1/286 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK L +N +I+ LCK RA+ + +M PD +Y LL ++ N
Sbjct: 183 GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 242
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ EM G PD+VS+ +I + D+A+ FR+M+ P I+ L++G
Sbjct: 243 KEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHG 302
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EAL+ + ++G + YN ++ C + DA ++ DEM + G P+
Sbjct: 303 YCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD 362
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++H + G +A S+F M+++ +P + Y ++ FC +++ A +W
Sbjct: 363 FYTFTTLIHGHCQDGNMTKALSLFGTMTQR-NIKPDIVAYNTLIDGFCKVGEMEKASELW 421
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
D M +R + P Y LIN+ C + +A + + M++ GI+P
Sbjct: 422 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPT 467
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 141/285 (49%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +++ LCK + + A ++FD+M +R PD ++T L+ G Q N+
Sbjct: 323 GCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKA 382
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M +PD+V+Y +I+ C ++A EL+ M + P+ + LIN
Sbjct: 383 LSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINA 442
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
S +SEA + + ++G +P T N V+ YC S + A + M G+ P+
Sbjct: 443 YCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPD 502
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ +++ ++ ++A+ +M K G P + TY +V+ FC ++ A +
Sbjct: 503 HISYNTLINGFVREDNMDKAFLWINKM-EKEGLLPDIITYNVVMNGFCRQGRMQEAELVL 561
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M +G+ P Y+ LIN +D L++A ++ EML G P
Sbjct: 562 RKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 151/320 (47%), Gaps = 3/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + +N L+ C+ + A+E+F +M ++ PD+ S++ L+ + + ++
Sbjct: 214 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRH 273
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +R+MK G PD V Y ++++ +C EA+++ EM C + T
Sbjct: 274 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 333
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL EK L++A + F + +RG P+ T+ ++ +C + A + M +
Sbjct: 334 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 393
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I P+ Y+ ++ K G E+A ++ M SRK P TY I++ +C V
Sbjct: 394 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK--IFPNHITYGILINAYCSVGHVSE 451
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A R+WD M +G+ P + +T+I C A ++ M+ G+ P ++ L
Sbjct: 452 AFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 511
Query: 300 ALRDEGMEETAVVLAQKIDK 319
E + A + K++K
Sbjct: 512 GFVREDNMDKAFLWINKMEK 531
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 143/336 (42%), Gaps = 36/336 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LI T ++R + E F ++ + + I + LL G + + EV+RE+
Sbjct: 51 FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G E +V + IM+NA C ++D+ EME + TLI E L
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + +G +P TYNA++ C R A ++ EM G+ P+T TY+ +L
Sbjct: 171 EAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 230
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ EA +F M R+ G P + ++ ++ +F N +D A+ + +MK G+
Sbjct: 231 VESCRRDNFSEAKEIFGEMLRQ-GVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289
Query: 253 LP-------VMH----------------------------MYSTLINSLCHEDKLDDACK 277
+P +MH Y+T++N LC E L DA K
Sbjct: 290 VPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADK 349
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
F EM++ G P F+ L +G A+ L
Sbjct: 350 LFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSL 385
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 134/306 (43%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + N +++ LCK + + +M+ D+ +Y L+ + ++ L
Sbjct: 113 GIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEA 172
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ M D G +P + +Y +IN C RY A + EM P + TL+
Sbjct: 173 FEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVE 232
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
SEA + FG+ ++G P+ ++++++ + + ++ A +M+K G+ P+
Sbjct: 233 SCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPD 292
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y +++H + G EA + M + G V Y ++ C + A +++
Sbjct: 293 NVIYTVLMHGYCRNGNMLEALKIRDEMLEQ-GCVLDVIAYNTILNGLCKEKMLTDADKLF 351
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM RG LP + ++TLI+ C + + A F M I+P ++ L
Sbjct: 352 DEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKV 411
Query: 305 GMEETA 310
G E A
Sbjct: 412 GEMEKA 417
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + +K ++ +N LID CK +E+A E++D M R+ P+ +Y IL+ + +
Sbjct: 389 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 448
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M + G +P +V+ +I +C + +A E M A P + T
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING E + +A + + +K G P+ TYN V+ +C R+ +A ++ +M + G
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
I P+ TY +++ + EA+ M ++
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQR 602
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 1/242 (0%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ ++I + A++ E E FR + + S + +L+ GL + A + +
Sbjct: 51 FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+ G E T N +V A C + +D + EM GI + TY+ ++ + G E
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA+ + M+ K G +P++ TY ++ C + A I EM G+ P Y+TL
Sbjct: 171 EAFEIMNSMADK-GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTL 229
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
+ C D +A + F EML G+ P FS+L + A+V + + K
Sbjct: 230 LVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGL 289
Query: 323 TP 324
P
Sbjct: 290 VP 291
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K L N +I C+S +A E +M + PD SY L+ G+ ++ N+
Sbjct: 463 GIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKA 522
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+M+ +G PD+++Y +++N C R EA + R+M P + LING
Sbjct: 523 FLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALING 582
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPE 149
++ L+EA +F + +RGF P+
Sbjct: 583 HVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
E VE NC + +F LI ++L E + F + +G+ N+++
Sbjct: 31 EVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLL 90
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
G + A+ + E+ + GI N T +I+++ L K G+ ++ S M G
Sbjct: 91 GGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGN-GI 149
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+ TY ++ +C ++ A I + M +G+ P + Y+ +IN LC + + A
Sbjct: 150 YADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKG 209
Query: 278 YFQEMLDIGIRPPGQLFSNL 297
EML+IG+ P ++ L
Sbjct: 210 ILIEMLNIGLSPDTTTYNTL 229
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL ++ +N +++ C+ ++ A+ V KM ++ +PD +YT L+ G Q N
Sbjct: 529 MEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDN 588
Query: 61 LLSMNEVYR---EMKDDGFEPDVV 81
L NE +R EM GF PD V
Sbjct: 589 L---NEAFRFHDEMLQRGFAPDDV 609
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 174/327 (53%), Gaps = 5/327 (1%)
Query: 2 DKF----GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
DKF G+ L +N L+D L S E+A E+F+ MK P+ +Y +LL+ G+
Sbjct: 784 DKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGK 843
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K + + ++Y EM+ G EP+ +++ I+I+A + ++A++L+ E+ + + P+P
Sbjct: 844 SKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCT 903
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+GL R +A++ F + G P + YN ++ + S I+ A + +M
Sbjct: 904 YGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMV 963
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K GI P+ ++Y I++ L GR +EA F+ + + G +P +Y ++ + ++
Sbjct: 964 KEGIRPDLKSYTILVECLCITGRIDEAVQYFEEL-KLTGLDPDTVSYNFIINGLGKSRRL 1022
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D A+ ++ EMK RG+ P ++ Y+ LI L K+D A K ++E+ +G+ P ++ L
Sbjct: 1023 DEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNAL 1082
Query: 298 KQALRDEGMEETAVVLAQKIDKLRKTP 324
+ G ++ A + +K+ + +P
Sbjct: 1083 IRGHSLSGNKDQAFSVFKKMMVVGCSP 1109
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 156/305 (51%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G ++ + LID LC + +++A+E++ KM+ PD +Y L++ +G+ +
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGD 355
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ + EM+ DG+ PDVV+Y I+I A C + D A ++ M P+ H + T
Sbjct: 356 LETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNT 415
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL +RL EAL+ + G +P A +Y + Y S A + M+K G
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + L+ L + GR EA +F + K G P TY ++++ + Q+D A
Sbjct: 476 IMPSIAACNASLYTLAETGRISEAEDIFNDL-HKCGLSPDSVTYNMLMKCYSKAGQIDKA 534
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM ++G P + + ++LIN+L ++D A K F + ++ + P ++ L
Sbjct: 535 TQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTG 594
Query: 301 LRDEG 305
L EG
Sbjct: 595 LGKEG 599
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 157/312 (50%), Gaps = 2/312 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
LI LCK + AQ VFDK K P ++SY L++G E++ +MK
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G P+ +Y ++++AH +KR ++ +L+ EM + C+P+ +I+ L L++A
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L + + F P TY ++ + R A ++ +EM G GPN+ Y+I+++
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K+G + A +FK+M K G P + +Y I+V C ++D A++ ++E+K G+ P
Sbjct: 946 FGKSGEIDFACELFKKMV-KEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDP 1004
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
Y+ +IN L +LD+A F EM + GI P ++ L L G + AV +
Sbjct: 1005 DTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMY 1064
Query: 315 QKIDKLRKTPLV 326
+++ + P V
Sbjct: 1065 EELQLVGLEPSV 1076
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 164/316 (51%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + ++ L+ L + + + ++MK P+I +YTI + G+ + +
Sbjct: 230 GMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDA 289
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM D+G PDV++Y ++I+A C+A + D+A EL+ +M A++ P + TL++
Sbjct: 290 WGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDK 349
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
G L +F+ + + G+ P+ TY ++ A C S ++ A+ M+D M GI PN
Sbjct: 350 FGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPN 409
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L+KA R +EA + + M G +PT +Y + + + + A+ +
Sbjct: 410 LHTYNTMICGLLKARRLDEALELLENM-ESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTF 468
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ MK RG++P + + + +L ++ +A F ++ G+ P ++ L +
Sbjct: 469 ETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKA 528
Query: 305 G-MEETAVVLAQKIDK 319
G +++ +L++ I K
Sbjct: 529 GQIDKATQLLSEMISK 544
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 118/212 (55%), Gaps = 1/212 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LID L K+ E+A ++F++M P+ Y IL+ G+G+ + E++++M
Sbjct: 904 YGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMV 963
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G PD+ SY I++ C R DEAV+ F E++ T P + +INGLG +RL
Sbjct: 964 KEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLD 1023
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL F + K RG P+ TYNA++ + +++ A +M +E++ G+ P+ TY+ ++
Sbjct: 1024 EALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALI 1083
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+G ++A+SVFK+M G P T+
Sbjct: 1084 RGHSLSGNKDQAFSVFKKM-MVVGCSPNTETF 1114
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 3/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + ID KS +A + F+ MKKR P I + L +
Sbjct: 436 MESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGR 495
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ ++ G PD V+Y +++ + A + D+A +L EM + C+P I +
Sbjct: 496 ISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINS 555
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN L R+ A + FG+ K P TYN ++ +I A + M + G
Sbjct: 556 LINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT T++ +L L K + A +F RM+ P V TY ++ ++D A
Sbjct: 616 CPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMM-NCNPDVLTYNTIIYGLIREGRIDYA 674
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG-IRPPGQLFSNLKQ 299
+ +MK + + P TLI + +++DA K E + ++ Q + L +
Sbjct: 675 FWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELME 733
Query: 300 ALRDEGMEETAVVLAQ 315
+ E E A+ A+
Sbjct: 734 CILTEAEIEEAISFAE 749
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ KS ++ A E+F KM K PD+KSYTIL+E + + + E+K
Sbjct: 939 YNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK 998
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD VSY +IN ++R DEA+ LF EM+ P + + LI LG ++
Sbjct: 999 LTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVD 1058
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A++ + + + G EP TYNA++ + S + A+ + +M G PNT T+ +
Sbjct: 1059 VAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLP 1118
Query: 193 HHLIKAGRTEEAY-SVF 208
+ +AG + +VF
Sbjct: 1119 NKYPRAGLVHNPFGAVF 1135
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 146/329 (44%), Gaps = 11/329 (3%)
Query: 4 FGLKQELPDF-------NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWG 56
F + +L +F N +++ L + R +E VFD M+K+ ++ +Y + +
Sbjct: 118 FKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALS 177
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY-DEAVELFREMEATNCKPSP 115
+ + R+M + GF + SY +I H + +EA+++++ M + KPS
Sbjct: 178 IKGGIGRAPFALRKMTEVGFILNAYSYNGLI--HLLLPGFCNEALKVYKRMISEGMKPSM 235
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ L+ LG + + + K G P TY + A + RI+DA+ + E
Sbjct: 236 KTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKE 295
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M G GP+ TY +++ L AG+ ++A ++ +M R P TY ++ F
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKM-RASSHSPDRVTYITLMDKFGKVG 354
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
++ R W+EM+ G P + Y+ LI +LC +D A M GI P ++
Sbjct: 355 DLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYN 414
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ L + A+ L + ++ L P
Sbjct: 415 TMICGLLKARRLDEALELLENMESLGVKP 443
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 77/160 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ +L + L++ LC + ++ A + F+++K DPD SY ++ G G+ +
Sbjct: 962 MVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRR 1021
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EMK+ G PD+ +Y +I A + D AV+++ E++ +PS +
Sbjct: 1022 LDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNA 1081
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
LI G +A F + G P T+ + Y
Sbjct: 1082 LIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKY 1121
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 166/310 (53%), Gaps = 5/310 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KFG + + F L+D LCK V+ A ++F+ M+ RF +++ +T LL GW +
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR-MRFPVNLRYFTSLLYGWCRVGK 267
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ V +M + GFEPD+V Y +++ + +A + +A +L R+M +P+ + +
Sbjct: 268 MMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTV 327
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L R+ EA++ F + ++ E + TY A+V +C +I+ Y ++D+M K G
Sbjct: 328 LIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKG 387
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ K EE + ++M R+ P + Y +V+R+ C +V A
Sbjct: 388 LMPSELTYMHIMVAHEKKESFEECLELMEKM-RQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG---IRPPGQLFSNL 297
+R+W+EM+ G+ P + + +IN L + L +A +F+EM+ G + G L L
Sbjct: 447 VRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLL 506
Query: 298 KQALRDEGME 307
L+D+ +E
Sbjct: 507 NTVLKDKKLE 516
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 148/318 (46%), Gaps = 7/318 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRR---FDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+ ++ L K R + ++M+K +P++ + +L++ + + EV
Sbjct: 150 YKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAIEVLD 207
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM GFEPD +G +++A C +A +LF +M + F +L+ G
Sbjct: 208 EMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR-MRFPVNLRYFTSLLYGWCRVG 266
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ EA Q + GFEP+ Y ++ Y + ++ DAY ++ +MR+ G PN Y
Sbjct: 267 KMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYT 326
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ L K R EEA VF M R E V TY +V FC ++D + D+M
Sbjct: 327 VLIQALCKVDRMEEAMKVFVEMERYE-CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G++P Y ++ + ++ ++ + ++M I P +++ + + G +
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 310 AVVLAQKIDKLRKTPLVD 327
AV L ++++ +P VD
Sbjct: 446 AVRLWNEMEENGLSPGVD 463
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 160/310 (51%), Gaps = 1/310 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ DF++++ + KS++ + +F M+ D+ SY I++ + + V
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPDVV+ +IN C R +A++L +ME +P I+ T+I+G
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 187
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+++A++ F + ++ G +A TYN++V C S R +DA R+M +M I PN T+
Sbjct: 188 GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITF 247
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
V+ +K G+ EA +++ M+R+ +P V TY ++ C + +VD A ++ D M
Sbjct: 248 TAVIDVFVKEGKFSEAMKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+G LP + Y+TLIN C ++D+ K F+EM G+ ++ + Q G +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 309 TAVVLAQKID 318
A + ++D
Sbjct: 367 AAQEIFSRMD 376
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 154/319 (48%), Gaps = 4/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ +L +N +I+ LC+ A V KM K ++PD+ + + L+ G+ Q
Sbjct: 95 MEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M++ GF PDVV Y +I+ C ++AVELF ME + + +
Sbjct: 155 VFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL R S+A + R P T+ AV+ + + ++A ++ +EM +
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ +++ L GR +EA + M K G P V TY ++ FC + +VD
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK-GCLPDVVTYNTLINGFCKSKRVDEG 333
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ EM RG++ Y+T+I + D A + F M RP + +S L
Sbjct: 334 TKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYG 390
Query: 301 LRDEGMEETAVVLAQKIDK 319
L E A+VL + + K
Sbjct: 391 LCMNWRVEKALVLFENMQK 409
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 142/289 (49%), Gaps = 4/289 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G++ + +N L+ LC S A + M R P++ ++T +++ + ++
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++Y EM +PDV +Y +IN C R DEA ++ M C P + T
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING KR+ E + F + +RG + TYN ++ Y + R + A + M
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS-- 377
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN RTY I+L+ L R E+A +F+ M +K E ++TY IV+ C V+ A
Sbjct: 378 -RPNIRTYSILLYGLCMNWRVEKALVLFENM-QKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ + +G+ P + Y+T+I+ C + + D + +++M + G+ P
Sbjct: 436 WDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 4/243 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F +ID K A +++++M +R DPD+ +Y L+ G + ++ M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDVV+Y +IN C +KR DE +LFREM + T+I G R
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + R P TY+ ++ C + R+ A + + M+K I + TY+IV+
Sbjct: 367 AAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H + K G E+A+ +F+ +S K G +P V +Y ++ FC Q D + ++ +M+ G+
Sbjct: 424 HGMCKIGNVEDAWDLFRSLSCK-GLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Query: 253 LPV 255
LP+
Sbjct: 483 LPL 485
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 161/320 (50%), Gaps = 6/320 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K+G ++ N L+D L K VE A F + K D S+ IL+ G+ + +
Sbjct: 183 IEKYGASKDREALNVLMDALVKEGDVEDAHSAFLEFKDC-ITLDSSSFNILIHGYCKARM 241
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ GF PDVVSY I A+C K + +F EM+ CKP+ + T
Sbjct: 242 FVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTT 301
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ LG ++L+EAL+ + + K+ G P++ Y++++ S RI DA+ + ++M K G
Sbjct: 302 VMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQG 361
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N Y+ ++ + A + +RM +P V TY +++M C + +
Sbjct: 362 VCRNLWVYNTMISSACAHSQGGSALKLLERM-EGDSCKPDVKTYAPLLKMCCRRKSIKLL 420
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M V + Y+ L+N C KL+ AC YFQE + G+ P + F L +
Sbjct: 421 KFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHACFYFQEAVLKGMVPMVKTFKALVEE 480
Query: 301 LRDEGMEETAVVLAQKIDKL 320
L + M+E + +KI+KL
Sbjct: 481 LEQKNMKE----MKEKIEKL 496
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 2/188 (1%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+P ++ +I+ LG K+ S Q K T + V+ + + DA +
Sbjct: 121 TPELYDYMIDILGKFKKFSLMWSLVEQMKGLNGYVSLATASKVMRRLAKARKYKDAIDVF 180
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ K G + ++++ L+K G E+A+S F + K S++ I++ +C
Sbjct: 181 RGIEKYGASKDREALNVLMDALVKEGDVEDAHSAF--LEFKDCITLDSSSFNILIHGYCK 238
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+A +I +EM+ G P + YS I + C + + F EM + G +P
Sbjct: 239 ARMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVIT 298
Query: 294 FSNLKQAL 301
++ + AL
Sbjct: 299 YTTVMHAL 306
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 169/324 (52%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ +K + ++ +ID+LCK + A +F++M+ + D+ +Y+ L+ G
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ REM PDVV++ +I+ + EA EL+ EM P + +
Sbjct: 325 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 384
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G E L EA Q F +G EP+ TY+ ++ +YC + R++D R+ E+ G
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT TY+ ++ ++G+ A +F+ M + G P+V TY I++ C N +++ A
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKA 503
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I+++M+ + + +Y+ +I+ +C+ K+DDA F + D G++P ++ +
Sbjct: 504 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +G A +L +K+ + TP
Sbjct: 564 LCKKGSLSEADMLFRKMKEDGCTP 587
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 1/317 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+ +L + LI+ LC V A + D+M + F PD +Y +L + N +
Sbjct: 201 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 260
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++R+M++ + VV Y I+I++ C +D+A+ LF EME K + +LI GL
Sbjct: 261 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 320
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ + + + + R P+ T++A++ + ++ +A + +EM GI P+T
Sbjct: 321 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 380
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++ K EA +F M K G EP + TY I++ +C +VD MR++ E
Sbjct: 381 TYNSLIDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFRE 439
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
+ ++G++P Y+TL+ C KL+ A + FQEM+ G+ P + L L D G
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 499
Query: 307 EETAVVLAQKIDKLRKT 323
A+ + +K+ K R T
Sbjct: 500 LNKALEIFEKMQKSRMT 516
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 154/293 (52%), Gaps = 7/293 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++G + + + +++ LCKS + A ++F KM++R + Y+I+++ + +
Sbjct: 230 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 289
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM+ G + DVV+Y +I C+ ++D+ ++ REM N P F
Sbjct: 290 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 349
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ E +L EA + + + RG P+ TYN+++ +C +++A +M D M G
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY I+++ KA R ++ +F+ +S K G P TY +V FC + +++ A
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAA 468
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDIGI 287
++ EM +RGV P + Y L++ LC +L+ A + F++M L IGI
Sbjct: 469 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 153/303 (50%), Gaps = 4/303 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD F+ LID K + A+E++++M R PD +Y L++G+ ++ L N+
Sbjct: 341 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQ 400
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M G EPD+V+Y I+IN++C AKR D+ + LFRE+ + P+ + TL+ G
Sbjct: 401 MFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFC 460
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+L+ A + F + RG P TY ++ C + +N A + ++M+K +
Sbjct: 461 QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIG 520
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y+I++H + A + ++A+S+F +S K G +P V TY +++ C + A ++ +
Sbjct: 521 IYNIIIHGMCNASKVDDAWSLFCSLSDK-GVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 579
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
MK G P Y+ LI + L + + +EM G + L D +
Sbjct: 580 MKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRL 639
Query: 307 EET 309
+++
Sbjct: 640 DKS 642
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 149/300 (49%), Gaps = 1/300 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K ++ ++ LI LC + ++ +M R PD+ +++ L++ + ++
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 359
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E+Y EM G PD ++Y +I+ C EA ++F M + C+P +
Sbjct: 360 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 419
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN KR+ + ++ F + +G P TYN +V +C S ++N A + EM G
Sbjct: 420 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 479
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G +A +F++M + T + Y I++ C ++VD A
Sbjct: 480 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT-LGIGIYNIIIHGMCNASKVDDA 538
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I LC + L +A F++M + G P ++ L +A
Sbjct: 539 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 598
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 137/286 (47%), Gaps = 1/286 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DFNRL + +++ + M+ + D+ + TI++ + ++K LL V
Sbjct: 101 DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRA 160
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G+EPD +++ ++N C R EAV L M +P TLINGL + R+
Sbjct: 161 WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRV 220
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
SEAL + + GF+P+ TY V+ C S A + +M + I + Y IV
Sbjct: 221 SEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 280
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K G ++A S+F M K G + V TY ++ C + + D ++ EM R
Sbjct: 281 IDSLCKDGSFDDALSLFNEMEMK-GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 339
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++P + +S LI+ E KL +A + + EM+ GI P +++L
Sbjct: 340 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 385
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 117/263 (44%), Gaps = 36/263 (13%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + + + +A K+YD + + ME + + +IN +K+L A
Sbjct: 97 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 156
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-----------------C- 179
G++ K G+EP+ T++ +V +C R+++A ++D M + C
Sbjct: 157 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 216
Query: 180 -----------------GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
G P+ TY VL+ L K+G + A +F++M + + +V
Sbjct: 217 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVV 275
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
Y IV+ C + D A+ +++EM+ +G+ + YS+LI LC++ K DD K +EM
Sbjct: 276 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335
Query: 283 LDIGIRPPGQLFSNLKQALRDEG 305
+ I P FS L EG
Sbjct: 336 IGRNIIPDVVTFSALIDVFVKEG 358
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +N L+ C+S + A+E+F +M R P + +Y ILL+G L
Sbjct: 444 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKA 503
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ +M+ + Y I+I+ C+A + D+A LF + KP + +I G
Sbjct: 504 LEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGG 563
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + LSEA F + K+ G P+ TYN ++ A+ + + +++EM+ CG +
Sbjct: 564 LCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 623
Query: 185 TRTYDIVLHHL 195
+ T +V+ L
Sbjct: 624 SSTIKMVIDML 634
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 153/299 (51%), Gaps = 1/299 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K +L N +D + K+ VE+ + +F+ ++ F PD++SY+IL+ G +
Sbjct: 389 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 448
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ MK GF D +Y +++ C + + +A E+ EM+ +P+ + +++G
Sbjct: 449 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 508
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL EA F ++K +G E Y++++ + RI++AY +++EM K G+ PN
Sbjct: 509 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 568
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ +L L+KA EA F+ M ++ P TY I++ C + + A W
Sbjct: 569 VYTWNSLLDALVKAEEINEALVCFQSM-KEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 627
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+M+ +G++P + Y+T+I+ L + DA F+ G P F+ L + + +
Sbjct: 628 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 686
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 2/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + F L+ L + V A + D++K +PDI Y + ++ +G+ N
Sbjct: 71 MQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 130
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + E+K G +PD VSY MI C A R EA ELF +MEA P + + T
Sbjct: 131 VDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNT 190
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G GS R +A + + ++RG P ++N+++ ++++A + + M+K
Sbjct: 191 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-D 249
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ TY+I++ L GR EEAY + M P + T I+V C +++ A
Sbjct: 250 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEH-ASLFPNLLTVNIMVDRLCKARKLEEA 308
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+I++ RG P Y +LI+ L + ++D+A + F++MLD G ++++L +
Sbjct: 309 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 368
Query: 301 LRDEGMEE 308
G +E
Sbjct: 369 FFIHGRKE 376
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 156/317 (49%), Gaps = 2/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + + LI L ++R ERA E+ +M++ ++ + +T L+ ++
Sbjct: 36 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 95
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+K EPD+V Y + I+ A D A + F E++A KP + +
Sbjct: 96 VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTS 155
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L RL EA + F Q + P A YN ++ Y + R DAY++++ +R+ G
Sbjct: 156 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 215
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +++ +L L K + +EA S+F+ M K EP STY I++ M C +V+ A
Sbjct: 216 CIPSVVSFNSILTCLGKKRKVDEALSLFEVM--KKDAEPNSSTYNIIIDMLCLGGRVEEA 273
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
RI DEM+ + P + + +++ LC KL++A K F+ G P + +L
Sbjct: 274 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 333
Query: 301 LRDEGMEETAVVLAQKI 317
L +G + A L +K+
Sbjct: 334 LGKKGQVDEAYRLFEKM 350
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 165/361 (45%), Gaps = 36/361 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ L L N ++D LCK+R +E A ++F+ +R +PD +Y L++G G++
Sbjct: 280 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 339
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M D G + V Y +I R ++ ++F+E+ CKP + T
Sbjct: 340 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNT 399
Query: 121 -----------------------------------LINGLGSEKRLSEALQFFGQSKKRG 145
LI+GL + E F K++G
Sbjct: 400 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 459
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F +A YNAVV +C S +++ AY +++EM++ + P TY ++ L K R +EAY
Sbjct: 460 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 519
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ ++ G E V Y ++ F ++D A I +EM +G+ P ++ +++L+++
Sbjct: 520 MLFEE-AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 578
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 325
L +++++A FQ M ++ P +S L L A V Q + K P
Sbjct: 579 LVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 638
Query: 326 V 326
V
Sbjct: 639 V 639
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID LC VE A + D+M+ P++ + I+++ + + L +++
Sbjct: 257 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD V+Y +I+ + DEA LF +M +P ++ +LI R
Sbjct: 317 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 376
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + F + +RG +P+ N + + + + +++R G P+ R+Y I++
Sbjct: 377 DGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 436
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L KAG+ E ++F M ++ G Y VV FC + +V A I +EMK + V
Sbjct: 437 HGLTKAGQARETSNIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 495
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y +++ L D+LD+A F+E GI L+S+L G + A +
Sbjct: 496 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 555
Query: 313 LAQKIDKLRKTPLV 326
+ +++ K TP V
Sbjct: 556 ILEEMMKKGLTPNV 569
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 1/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N ++D CKS V +A E+ ++MK++ P + +Y +++G +
Sbjct: 455 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 514
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E K G E +VV Y +I+ R DEA + EM P+ + + +
Sbjct: 515 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 574
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + ++EAL F K+ P TY+ ++ C + N A+ +M+K G
Sbjct: 575 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 634
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
+ PN TY ++ L K G +AYS+F+R G P +++ ++
Sbjct: 635 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI-PDAASFNALI 681
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 132/270 (48%), Gaps = 2/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I + E A ++ +++++R P + S+ +L G+++ + ++ MK
Sbjct: 188 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 247
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D EP+ +Y I+I+ C R +EA + EME + P+ +++ L ++L
Sbjct: 248 KDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 306
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + +RG P+ TY +++ ++++AYR+ ++M G N Y ++
Sbjct: 307 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI 366
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ GR E+ + VFK + R+ G +P ++ + +V+ I++++++ G
Sbjct: 367 RNFFIHGRKEDGHKVFKELIRR-GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 425
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
LP + YS LI+ L + + F M
Sbjct: 426 LPDVRSYSILIHGLTKAGQARETSNIFHAM 455
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 109/216 (50%), Gaps = 4/216 (1%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V R +K F P +Y ++I A A+R + A+EL R+M+ + H+F TL+ L
Sbjct: 35 VMRRLK---FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALA 91
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
E ++++AL + K EP+ YN + + + ++ A + E++ G+ P+
Sbjct: 92 REGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDV 151
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y ++ L KAGR EA +F +M + P Y ++ + + + A ++ +
Sbjct: 152 SYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRFEDAYKLLER 210
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ RG +P + +++++ L + K+D+A F+ M
Sbjct: 211 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 246
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 99/196 (50%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+ + ++D L K ++ A +F++ K + + ++ Y+ L++G+G+ + +
Sbjct: 499 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 558
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM G P+V ++ +++A A+ +EA+ F+ M+ C P+ + + LINGL +
Sbjct: 559 EMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQ 618
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ ++A F+ +K+G P TY ++ I DAY + + + G P+ +++
Sbjct: 619 KYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFN 678
Query: 190 IVLHHLIKAGRTEEAY 205
++ + A R EAY
Sbjct: 679 ALIEGMSNANRAMEAY 694
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 87/167 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ LID K ++ A + ++M K+ P++ ++ LL+ + + +
Sbjct: 529 GIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEA 588
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ MK+ P+ +Y I+IN C ++Y++A +++M+ P+ + T+I+G
Sbjct: 589 LVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISG 648
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
L +++A F + K G P+A ++NA++ + R +AY+
Sbjct: 649 LAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 103/229 (44%), Gaps = 8/229 (3%)
Query: 80 VVSYGI-------MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
V+ YG+ + A A+R D+AV M +P+ + LI L +R
Sbjct: 3 VLGYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPE 62
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL+ Q ++ G+E + +V A ++ DA ++DE++ + P+ Y++ +
Sbjct: 63 RALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCI 122
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
KAG + A F + + G +P +Y ++ + C ++ A ++ +M+A
Sbjct: 123 DCFGKAGNVDMACKFFHEL-KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERS 181
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+P + Y+T+I + +DA K + + + G P F+++ L
Sbjct: 182 VPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCL 230
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
+ A + R++DA + MR+ P Y +++ L +A R E A + ++M ++
Sbjct: 16 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-QEV 74
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G E V + +VR QV A+ + DE+K + P + +Y+ I+ +D A
Sbjct: 75 GYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 134
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
CK+F E+ G++P ++++ L G A L +++ R P
Sbjct: 135 CKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVP 183
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 1/295 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K L FN +++ LCK+ +E A++VFD+M + PD+ SY LL G+ + L
Sbjct: 220 KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLA 279
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ EM G PDVV++ +I+A C A ++AV L +M + + F LI+G
Sbjct: 280 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 339
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ L +AL + +K G +P YNA++ YC R++ A ++ EM + P+
Sbjct: 340 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ K G + A+ + ++M +K G P TY ++R C +++ A +++
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKK-GVLPDAITYSSLIRGLCEEKRLNDACELFEN 458
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M GV P Y+TLI+ C E ++ A EM+ G+ P +S L L
Sbjct: 459 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 149/312 (47%), Gaps = 16/312 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ F LI CK+ ++E+A + +M++R + ++T L++G+ ++
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L EM+ G +P VV Y +IN +C R D A EL REMEA KP + T
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G L A Q + K+G P+A TY++++ C R+NDA + + M + G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ K G E+A S+ M RK G P V TY +++ +A+ A
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK-GVLPDVVTYSVLINGLSKSARTKEA 522
Query: 241 MRIWDEMKARGVLPVMHMYS---------------TLINSLCHEDKLDDACKYFQEMLDI 285
R+ ++ +P Y L+ C + + +A K +Q MLD
Sbjct: 523 HRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDR 582
Query: 286 GIRPPGQLFSNL 297
+ G ++S L
Sbjct: 583 NWKLDGSVYSIL 594
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 163/335 (48%), Gaps = 9/335 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N L+ LC +E A V M+ P+ +Y L+ + +
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202
Query: 61 LLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L V M+++G +P++V++ M+N C A R + A ++F EM P +
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TL++G L E+L F + +RG P+ T+ +++ A C + + A ++ +MR+
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ N T+ ++ K G ++A + M RK G +P+V Y ++ +C ++D+
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEM-RKCGIQPSVVCYNALINGYCKLGRMDL 381
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + EM+A+ V P + YST+I+ C LD A + Q+ML G+ P +S+L +
Sbjct: 382 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 441
Query: 300 ALRDEG-------MEETAVVLAQKIDKLRKTPLVD 327
L +E + E + L + D+ T L+D
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 476
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 167/395 (42%), Gaps = 77/395 (19%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G +P +N ++ L + + A+ M + P++ +Y IL+ + L
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA---VELFREMEATNCKPSPHIFCTL 121
V +M+ G P+ V+Y ++ A C A D A V L RE N KP+ F ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMRE--EGNAKPNLVTFNSM 229
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+NGL R+ A + F + + G P+ +YN ++ YC ++++ + EM + G+
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS----------------------------- 212
P+ T+ ++H KAG E+A ++ +M
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349
Query: 213 -----RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA------------------ 249
RK G +P+V Y ++ +C ++D+A + EM+A
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409
Query: 250 -----------------RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+GVLP YS+LI LC E +L+DAC+ F+ ML +G++P
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469
Query: 293 LFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
++ L EG E A+ L ++ +RK L D
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEM--IRKGVLPD 502
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 50/184 (27%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ-- 58
M + G++ + + LID CK +VE+A + D+M ++ PD+ +Y++L+ G +
Sbjct: 459 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSAR 518
Query: 59 -----------------------------------KNLLSM-------------NEVYRE 70
K+++++ ++VY+
Sbjct: 519 TKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQS 578
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M D ++ D Y I+I+ HC +A+ ++M + P+ +L+ GL E
Sbjct: 579 MLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGM 638
Query: 131 LSEA 134
+ EA
Sbjct: 639 VVEA 642
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 152/313 (48%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + LI LCK+RH+ A E+F++M P++ +Y L+ G +
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ R+M G +P+V+++ +I+A + EA EL++ M + P + LING
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + RL EA Q F + G+ P TY ++ +C S R+ D ++ EM + G+ N
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY +++ GR + A VF +M + P + TY +++ CYN V+ A+ I+
Sbjct: 362 TITYTVLIQGYCLVGRPDVAQEVFNQMGSRRA-PPDIRTYNVLLDGLCYNGYVEKALMIF 420
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M+ R + + Y+ +I +C K++DA F + G++P ++ +
Sbjct: 421 KYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 480
Query: 305 GMEETAVVLAQKI 317
G A L +K+
Sbjct: 481 GFIHEADALFKKM 493
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 150/316 (47%), Gaps = 1/316 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ DF RL+ + K + + +F++M+ P + + I++ + +
Sbjct: 81 SIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFL 140
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M GFEPD+V++ +++ C R ++A+ LF ++ +P+ + TLI+ L
Sbjct: 141 GKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKN 200
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ L+ A++ F Q G P TYN++V C R +DA ++ +M K GI PN T+
Sbjct: 201 RHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF 260
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
++ +K G+ EA ++K M + P V TY ++ C ++D A +++ M+
Sbjct: 261 TALIDAFVKVGKIMEAKELYKVMIQM-SVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+ G P Y+TLI+ C +++D K F EM G+ ++ L Q G +
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379
Query: 309 TAVVLAQKIDKLRKTP 324
A + ++ R P
Sbjct: 380 VAQEVFNQMGSRRAPP 395
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 153/319 (47%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ L N +++ +C+S RA KM K F+PD+ ++T LL G+
Sbjct: 108 MQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNR 167
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ ++ GF P+VV+Y +I+ C + + AVE+F +M +P+ + +
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL R S+A KRG +P T+ A++ A+ +I +A + M +
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS 287
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +++ L GR +EA +F M G P TY ++ FC + +V+
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMFYLMESN-GYYPNEVTYTTLIHGFCKSKRVEDG 346
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+I+ EM +G++ Y+ LI C + D A + F +M P + ++ L
Sbjct: 347 TKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDG 406
Query: 301 LRDEGMEETAVVLAQKIDK 319
L G E A+++ + + K
Sbjct: 407 LCYNGYVEKALMIFKYMRK 425
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ + F LID K + A+E++ M + PD+ +YT L+ G
Sbjct: 248 MMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGR 307
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ M+ +G+ P+ V+Y +I+ C +KR ++ ++F EM + +
Sbjct: 308 LDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTV 367
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G R A + F Q R P+ TYN ++ C++ + A + MRK
Sbjct: 368 LIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKRE 427
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N TY I++ + K G+ E+A+ +F + K G +P V TY ++ FC + A
Sbjct: 428 MDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSK-GMKPNVITYTTMISGFCRRGFIHEA 486
Query: 241 MRIWDEMKARGVLP 254
++ +MK G LP
Sbjct: 487 DALFKKMKEDGFLP 500
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 1/273 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A ++F +M R P I +T LL + K + ++ +M+ G P + + I++N
Sbjct: 66 ALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMN 125
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C + + A +M +P F +L++G R+ +AL F Q GF P
Sbjct: 126 CVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRP 185
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TY ++ C + +N A + ++M GI PN TY+ ++ L + GR +A +
Sbjct: 186 NVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLL 245
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+ M ++ G +P V T+ ++ F ++ A ++ M V P + Y+ LIN LC
Sbjct: 246 RDMMKR-GIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCT 304
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+LD+A + F M G P ++ L
Sbjct: 305 YGRLDEARQMFYLMESNGYYPNEVTYTTLIHGF 337
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+++EA++LF M + PS F L++ + KR + F Q + G P T N
Sbjct: 62 QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
V+ C S + A + +M K G P+ T+ +LH R E+A ++F ++
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV-G 180
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P V TY ++ C N ++ A+ I+++M G+ P + Y++L++ LC + D
Sbjct: 181 MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSD 240
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A ++M+ GI+P F+ L A G
Sbjct: 241 AAWLLRDMMKRGIQPNVITFTALIDAFVKVG 271
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 82/172 (47%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI CKS+ VE ++F +M ++ + +YT+L++G+ EV+ +M
Sbjct: 330 YTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMG 389
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PD+ +Y ++++ C ++A+ +F+ M + + +I G+ ++
Sbjct: 390 SRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVE 449
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+A F +G +P TY ++ +C I++A + +M++ G PN
Sbjct: 450 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
++ G ++ PD +N L+D LC + +VE+A +F M+KR D +I +YTI+++G +
Sbjct: 386 NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKV 445
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ +++ + G +P+V++Y MI+ C EA LF++M+ P+ +
Sbjct: 446 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 192 LHHLIKAGRTEEAYSVFKRMSR-KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
LH+L + EA +F RM +P P++ + ++ + + D+ + ++++M+
Sbjct: 58 LHNL----QFNEALDLFTRMVHSRP--LPSIVDFTRLLSVIAKMKRFDVVISLFEQMQIL 111
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G+ PV++ + ++N +C + A + +M+ +G P F++L E A
Sbjct: 112 GISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDA 171
Query: 311 VVLAQKIDKLRKTPLV 326
+ L +I + P V
Sbjct: 172 LALFDQIVGMGFRPNV 187
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 164/319 (51%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ +L FN +I+ C V A + KM K ++PD + L+ G+ ++
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G++PD+V+Y +I++ C KR ++A + F+E+E +P+ +
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTA 230
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL + R S+A + K+ P TY+A++ A+ + ++ +A + +EM +
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY +++ L R +EA +F M K G V +Y ++ FC +V+
Sbjct: 291 IDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVEDG 349
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+++ EM RG++ Y+TLI +D A ++F +M GI P ++ L
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 301 LRDEGMEETAVVLAQKIDK 319
L D G E A+V+ + + K
Sbjct: 410 LCDNGELEKALVIFEDMQK 428
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 155/316 (49%), Gaps = 1/316 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ DFNRL+ + K + + + KM+ D+ ++ I++ + + +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPD V+ G ++N C R +AV L +M KP + +I+ L
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
KR+++A FF + +++G P TY A+V C S R +DA R++ +M K I PN TY
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+L +K G+ EA +F+ M R +P + TY +V C + ++D A +++D M
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
++G L + Y+TLIN C +++D K F+EM G+ ++ L Q G +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 309 TAVVLAQKIDKLRKTP 324
A ++D +P
Sbjct: 383 KAQEFFSQMDFFGISP 398
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 160/312 (51%), Gaps = 13/312 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + G K ++ +N +ID+LCK++ V A + F +++++ P++ +YT L+ G
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W LLS +M P+V++Y +++A + EA ELF EM + P
Sbjct: 241 WSDAARLLS------DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +L+NGL R+ EA Q F +G + +YN ++ +C + R+ D ++
Sbjct: 295 IVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM + G+ NT TY+ ++ +AG ++A F +M G P + TY I++ C N
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCDN 413
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+++ A+ I+++M+ R + + Y+T+I +C K+++A F + G++P +
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 295 SNLKQALRDEGM 306
+ + L +G+
Sbjct: 474 TTMMSGLCTKGL 485
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 143/282 (50%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++ G++ + + L++ LC S A + M K++ P++ +Y+ LL+ + +
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L E++ EM +PD+V+Y ++N C R DEA ++F M + C + T
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING KR+ + ++ F + +RG TYN ++ + + ++ A +M G
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+I+L L G E+A +F+ M ++ + + TY V+R C +V+ A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE-MDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ + +G+ P + Y+T+++ LC + L + + +M
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L+D K+ V A+E+F++M + DPDI +Y+ L+ G + N+++ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G DVVSY +IN C AKR ++ ++LFREM + + TLI G +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A +FF Q G P+ TYN ++G C + + A + ++M+K + + TY V+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K G+ EEA+S+F +S K G +P + TY ++ C + ++ +MK G+
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 253 L 253
+
Sbjct: 502 M 502
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 1/272 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
RL T + + A ++F M K R P I + LL + K + + ++M+
Sbjct: 55 RLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G D+ ++ I+IN C + A+ + +M +P +L+NG R+S+A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ + + G++P+ YNA++ + C + R+NDA+ E+ + GI PN TY +++
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L + R +A + M +K T P V TY ++ F N +V A +++EM + P
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKIT-PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+ YS+L+N LC D++D+A + F M+ G
Sbjct: 294 DIVTYSSLVNGLCLHDRIDEANQMFDLMVSKG 325
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+ ++A++LF +M + PS F L++ + K+ + + + G + T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
V+ +C +++ A ++ +M K G P+ T +++ + R +A S+ +M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV-E 183
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G +P + Y ++ C +V+ A + E++ +G+ P + Y+ L+N LC+ + D
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A + +M+ I P +S L A G
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNG 274
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 4/197 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N LI+ CK++ VE ++F +M +R + +Y L++G+ Q ++
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + +M G PD+ +Y I++ C ++A+ +F +M+ + T+I G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ EA F +G +P+ TY ++ C +++ + +M++ G+ N
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN 504
Query: 185 TRTY---DIVLH-HLIK 197
T DI L LIK
Sbjct: 505 DCTLSDGDITLSAELIK 521
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L++A+ F K P +N ++ A + + + +M GI + T++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
IV++ + A S+ +M K G EP T +V FC +V A+ + D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G P + Y+ +I+SLC +++DA +F+E+ GIRP ++ L L +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 310 AVVLAQKIDKLRKTPLV 326
A L + K + TP V
Sbjct: 244 AARLLSDMIKKKITPNV 260
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 15/322 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L +N +I C S A+++ +M +R+ PD+ +Y L+ + ++
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y EM G P+ ++Y MI+ C R D A +F M C P+ F T
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G KR+ + ++ + + G + TYN ++ + +N A ++ EM G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRM 230
+ P+ T D +L L G+ ++A +FK M + G EP V TY I++
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A +++EM RG++P YS++I+ LC + +LD+A + F M P
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 291 GQLFSNL-----KQALRDEGME 307
F+ L K D+G+E
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLE 602
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 165/358 (46%), Gaps = 37/358 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ F L+ LC V A + F +M + P++ ++T L+ G ++
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFC 119
++ + M +DG +P ++YG +++ C A+ L R+ME ++ P+ I+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L + R S+A F + +++G P+ TYN+++ +C S R +DA +++ EM +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I P+ TY+ +++ +K G+ EA ++ M + G P TY ++ FC ++D
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDA 378
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD------------------------- 274
A ++ M +G P + ++TLI+ C ++DD
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 275 ----------ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
A QEM+ G+ P L L D G + A+ + + + K +K
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 165/353 (46%), Gaps = 37/353 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK- 59
M++ ++ ++ FN LI C + A F K+ K PD+ ++T LL G +
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164
Query: 60 ------------------NLLS----MNEVYRE------------MKDDGFEPDVVSYGI 85
N+++ MN + RE M +DG +P ++YG
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 86 MINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
+++ C A+ L R+M E ++ P+ I+ +I+ L + R S+A F + +++
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+ TYN+++ +C S R +DA +++ EM + I P+ TY+ +++ +K G+ EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
++ M + G P TY ++ FC ++D A ++ M +G P + ++TLI+
Sbjct: 345 EELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
C ++DD + EM + G+ ++ L G A+ L Q++
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 160/358 (44%), Gaps = 47/358 (13%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ ++ +N LI+ K A+E++D+M R P+ +Y+ +++G+ +Q L +
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ M G P+++++ +I+ +C AKR D+ +EL EM T + TLI+G
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC------ 179
L+ AL + G P+ T + ++ C + ++ DA M M+K
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 180 -----GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
G+ P+ +TY+I++ LI G+ EA +++ M + G P TY ++ C
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQ 559
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD-------------------- 274
+++D A +++D M ++ P + ++TLIN C ++DD
Sbjct: 560 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 619
Query: 275 ---------------ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
A FQEM+ G+ P N+ L + + AV + +K+
Sbjct: 620 ITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 132/282 (46%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ +E A ++F M + R P + + L+ + + + +Y++M+ D+ S+
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+I CS + A+ F ++ P F TL++GL E R+SEAL FF Q +
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P T+ ++ C RI +A ++D M + G+ P TY ++ + K G T
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++ ++M P V Y ++ C + + A ++ EM+ +G+ P + Y+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C + DA + QEML+ I P ++ L A EG
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 13/313 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLS 63
GL+ + ++D +CK A + KM++ P++ Y+ +++ +
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM++ G PD+ +Y MI CS+ R+ +A +L +EM P + LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E + EA + + + RG P TY++++ +C R++ A M M G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++ ++ A R ++ + M+ + G +TY ++ F ++ A+ +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDI-----GIRPPGQ 292
EM + G+ P + TL++ LC KL DA + F+ M LD G+ P Q
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 293 LFSNLKQALRDEG 305
++ L L +EG
Sbjct: 513 TYNILISGLINEG 525
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 12/289 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L FN LID C ++ ++ E+ +M + D +Y L+ G+ +L +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-----------NCKP 113
++ +EM G PD+V+ +++ C + +A+E+F+ M+ + +P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ LI+GL +E + EA + + + RG P+ TY++++ C R+++A +M
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
D M PN T+ +++ KAGR ++ +F M R+ G TY ++ F
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR-GIVANAITYITLICGFRK 628
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ A+ I+ EM + GV P ++ L +++L A +++
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 2/275 (0%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
L G+ + K L +++ +M P VV + ++ +R D + L+++ME
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
+ + F LI S +L AL FG+ K G P+ T+ ++ C R+++A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+M + PN T+ +++ L + GR EA ++ RM + G +PT TY +V
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MEDGLQPTQITYGTIVDG 228
Query: 231 FCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C A+ + +M + ++P + +YS +I+SLC + + DA F EM + GI P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++++ G A L Q++ + + +P
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 164/336 (48%), Gaps = 17/336 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ ++ LI CK VE+A E+ D+M + P+I Y L++G + ++
Sbjct: 355 GLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 414
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M + G EPD V+Y MI+ +C ++ EA LF EM + +P ++ L++G
Sbjct: 415 RKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHG 474
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + +A+ F + ++GF ++N ++ YC S +I +A ++ EM I P+
Sbjct: 475 CCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPD 533
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRK----------------PGTEPTVSTYEIVV 228
TY V+ KAG+ EEA +FK M + G +P TY +V+
Sbjct: 534 HVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVI 593
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C + A ++ DE+ +G+L ++ LI +LC + L +A K EM ++G++
Sbjct: 594 YAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLK 653
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P S L ++ + G + A + + + L P
Sbjct: 654 PSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP 689
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K F LI+ C+ ++ RA E+ D+M+KR P SY ++ G K+
Sbjct: 106 MITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 165
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N++ +M G +P+VV Y +I + S R +EA L M + P +
Sbjct: 166 LSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 225
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ EA + + + RG +P+A T+ A + Y + ++ +A + DEM G
Sbjct: 226 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 285
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++++ KAG EA S+F+ + G P V T + N +V A
Sbjct: 286 LMPNNPLYTVLINGHFKAGNLMEALSIFRHL-HALGVLPDVQTCSAFIHGLLKNGRVQEA 344
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++ E+K +G++P + YS+LI+ C + +++ A + EM GI P +++ L
Sbjct: 345 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 404
Query: 301 LRDEG 305
L G
Sbjct: 405 LCKSG 409
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 140/282 (49%), Gaps = 1/282 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N +I L K+ +E A +++ R PD ++ + G+ + +
Sbjct: 215 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 274
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + EM D G P+ Y ++IN H A EA+ +FR + A P I+G
Sbjct: 275 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 334
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ EAL+ F + K++G P+ TY++++ +C + A+ + DEM GI PN
Sbjct: 335 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 394
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ ++ L K+G + A +F M K G EP TY ++ +C + V A ++
Sbjct: 395 IFIYNALVDGLCKSGDIQRARKLFDGMPEK-GLEPDSVTYSTMIDGYCKSENVAEAFSLF 453
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
EM ++GV P +Y+ L++ C E ++ A F+EML G
Sbjct: 454 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 142/297 (47%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LC+++ + A+ F++M+K PD + + L++G+ ++ +
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + M G ++++Y ++I+ C + ++A E+ + M CKP+ FC
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G E + AL+ + +KR P A +Y A++ C ++ A +++++M G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++ GR EEA + MS G P + Y ++ +++ A
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCS-GVAPDIFCYNAIISCLSKAGKMEEA 239
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
E++ RG+ P + I K+ +A KYF EMLD G+ P L++ L
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 296
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 144/313 (46%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ L +N LI LCK +E+A E+ M P+ +++ +L+EG+ ++ N
Sbjct: 71 MVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHN 130
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ EM+ P VSYG MIN C K A +L +M + KP+ ++ T
Sbjct: 131 MGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYST 190
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G SE R+ EA + G P+ YNA++ + ++ +A + E++ G
Sbjct: 191 LIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRG 250
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ + K G+ EA F M G P Y +++ + A
Sbjct: 251 LKPDAVTFGAFILGYSKTGKMTEAAKYFDEM-LDHGLMPNNPLYTVLINGHFKAGNLMEA 309
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I+ + A GVLP + S I+ L ++ +A K F E+ + G+ P +S+L
Sbjct: 310 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 369
Query: 301 LRDEGMEETAVVL 313
+G E A L
Sbjct: 370 FCKQGEVEKAFEL 382
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ + + + GL KR++EA F + +K G +P+ +A++ + I++ R+
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
D M CGI N TY++++H L K G+ E+A + K M G +P T+ +++ +C
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT-LGCKPNSRTFCLLIEGYC 126
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+ A+ + DEM+ R ++P Y +IN LCH L A K ++M G++P
Sbjct: 127 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 186
Query: 293 LFSNLKQALRDEGMEETA 310
++S L EG E A
Sbjct: 187 VYSTLIMGYASEGRIEEA 204
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 143/300 (47%), Gaps = 19/300 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + ++ +ID CKS +V A +F +M + P Y L+ G ++ +
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++REM GF +S+ +I+ +C + + EA +LF+EM A P + T
Sbjct: 481 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539
Query: 121 LINGLGSEKRLSEALQFFGQSKKR-----------------GFEPEAPTYNAVVGAYCWS 163
+I+ ++ EA F + ++R G +P+ TY V+ A+C
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 599
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ +A+++ DE+ G+ +D+++ L K EA + M + G +P+++
Sbjct: 600 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG-ELGLKPSLAA 658
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+VR F ++D A R+++ +K+ G++P L+N ++ +DA ++++
Sbjct: 659 CSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 2/246 (0%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M + G P+ +Y I+ C AKR +EA F EM+ T KP + LI+G E
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ E L+ G TYN ++ C ++ A ++ M G PN+RT+ +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ + A + M ++ P+ +Y ++ C+ + +A ++ ++M
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKR-NLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEET 309
G+ P + +YSTLI E ++++A + M G+ P ++ + L G MEE
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239
Query: 310 AVVLAQ 315
+ L +
Sbjct: 240 STYLLE 245
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PNT TY I+ L +A R EA F+ M +K G +P + ++ F +D
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREGDIDE 63
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+RI D M + G+ + Y+ LI+ LC K++ A + + M+ +G +P + F L +
Sbjct: 64 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 123
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
E A+ L +++K P
Sbjct: 124 GYCREHNMGRALELLDEMEKRNLVP 148
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 153/299 (51%), Gaps = 1/299 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K +L N +D + K+ VE+ + +F+ ++ F PD++SY+IL+ G +
Sbjct: 257 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 316
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ MK GF D +Y +++ C + + +A E+ EM+ +P+ + +++G
Sbjct: 317 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 376
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL EA F ++K +G E Y++++ + RI++AY +++EM K G+ PN
Sbjct: 377 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 436
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ +L L+KA EA F+ M ++ P TY I++ C + + A W
Sbjct: 437 VYTWNSLLDALVKAEEINEALVCFQSM-KEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 495
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+M+ +G++P + Y+T+I+ L + DA F+ G P F+ L + + +
Sbjct: 496 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 554
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 165/361 (45%), Gaps = 36/361 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ L L N ++D LCK+R +E A ++F+ +R +PD +Y L++G G++
Sbjct: 148 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 207
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M D G + V Y +I R ++ ++F+E+ CKP + T
Sbjct: 208 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 267
Query: 121 -----------------------------------LINGLGSEKRLSEALQFFGQSKKRG 145
LI+GL + E F K++G
Sbjct: 268 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 327
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F +A YNAVV +C S +++ AY +++EM++ + P TY ++ L K R +EAY
Sbjct: 328 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 387
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ ++ G E V Y ++ F ++D A I +EM +G+ P ++ +++L+++
Sbjct: 388 MLFEE-AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 446
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 325
L +++++A FQ M ++ P +S L L A V Q + K P
Sbjct: 447 LVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 506
Query: 326 V 326
V
Sbjct: 507 V 507
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A + F ++K + PD SYT ++ + L E++ +M+ + P +Y MI
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
+ SA R+++A +L + C PS F +++ LG ++++ EAL F + K+ EP
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEP 120
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ TYN ++ C R+ +AYR++DEM + PN T +I++ L KA + EEAY +F
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 180
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+ S++ G P TY ++ QVD A R++++M G +Y++LI +
Sbjct: 181 ESASQR-GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ +D K F+E++ G +P L + + G E ++ + I
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 288
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID LC VE A + D+M+ P++ + I+++ + + L +++
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD V+Y +I+ + DEA LF +M +P ++ +LI R
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 244
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + F + +RG +P+ N + + + + +++R G P+ R+Y I++
Sbjct: 245 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 304
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L KAG+ E ++F M ++ G Y VV FC + +V A I +EMK + V
Sbjct: 305 HGLTKAGQARETSNIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y +++ L D+LD+A F+E GI L+S+L G + A +
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 423
Query: 313 LAQKIDKLRKTPLV 326
+ +++ K TP V
Sbjct: 424 ILEEMMKKGLTPNV 437
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 1/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N ++D CKS V +A E+ ++MK++ P + +Y +++G +
Sbjct: 323 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 382
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E K G E +VV Y +I+ R DEA + EM P+ + + +
Sbjct: 383 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 442
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + ++EAL F K+ P TY+ ++ C + N A+ +M+K G
Sbjct: 443 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 502
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
+ PN TY ++ L K G +AYS+F+R G P +++ ++
Sbjct: 503 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI-PDAASFNALI 549
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 132/270 (48%), Gaps = 2/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I + E A ++ +++++R P + S+ +L G+++ + ++ MK
Sbjct: 56 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 115
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D EP+ +Y I+I+ C R +EA + EME + P+ +++ L ++L
Sbjct: 116 KDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 174
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + +RG P+ TY +++ ++++AYR+ ++M G N Y ++
Sbjct: 175 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI 234
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ GR E+ + +FK + R+ G +P ++ + +V+ I++++++ G
Sbjct: 235 RNFFIHGRKEDGHKIFKELIRR-GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 293
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
LP + YS LI+ L + + F M
Sbjct: 294 LPDVRSYSILIHGLTKAGQARETSNIFHAM 323
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 146/274 (53%), Gaps = 1/274 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID LCK E+ + + +M +P++ +++IL++G ++ + +EV R M
Sbjct: 241 YNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMI 300
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G EPD+++Y +++ +C + D A +F + KP+ + LING +K L+
Sbjct: 301 EKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLA 360
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+Q FG+ ++G +P+ TY+ ++ RI DA ++ DEM + G P+ + +L
Sbjct: 361 KAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLL 420
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G EEA +F ++ R + +S Y +V+ C N +V A I++++ + G+
Sbjct: 421 FGYFKYGLVEEAMLLFSKLERNR-EDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGL 479
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+P + Y+ +I C E D+ ++M D G
Sbjct: 480 IPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 152/321 (47%), Gaps = 2/321 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRF-DPDIKSYTILLEGWGQQKNL 61
K G+ + FN L+ L V A +F K+ + + +P+ Y ++ G ++ +
Sbjct: 125 KTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHT 184
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ R M+ +PDV +Y I+I+A C D A+ L EM+ N P+ + +L
Sbjct: 185 EKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSL 244
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL + + + P T++ ++ C ++ DA +M M + G+
Sbjct: 245 IDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGV 304
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY ++ G+ + A VF + R G +P + +Y I++ +C + AM
Sbjct: 305 EPDIITYSAIMDGYCLRGQVDRARRVFNVL-RDKGIKPNIFSYSILINGYCKKKNLAKAM 363
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+++ E+ +G+ P YST+++ L ++ DA K F EML +G P L S L
Sbjct: 364 QLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGY 423
Query: 302 RDEGMEETAVVLAQKIDKLRK 322
G+ E A++L K+++ R+
Sbjct: 424 FKYGLVEEAMLLFSKLERNRE 444
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 157/312 (50%), Gaps = 13/312 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M++ K ++ ++ +ID LCK +++ A + ++MK++ P+I +Y L++G
Sbjct: 194 MEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQ 253
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W + K LLS EM + P+V ++ I+I+ C + ++A E+ R M +P
Sbjct: 254 WEKVKTLLS------EMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPD 307
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +++G ++ A + F + +G +P +Y+ ++ YC + A ++
Sbjct: 308 IITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFG 367
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
E+ + G+ P+T TY +LH LI+ GR +A +F M R G P + + ++ +
Sbjct: 368 EISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLR-VGPTPDICLHSTLLFGYFKY 426
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
V+ AM ++ +++ + Y+ +IN LC D++ +A F+++ IG+ P + +
Sbjct: 427 GLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTY 486
Query: 295 SNLKQALRDEGM 306
+ + EG+
Sbjct: 487 NVMITGFCREGL 498
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 138/294 (46%), Gaps = 2/294 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM- 71
N + ++ C ++ A V K ++ ++ LL G + + +++++
Sbjct: 100 LNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLV 159
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
++ EP+ V YG ++N ++ + L R ME N KP + +I+ L + L
Sbjct: 160 REKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINL 219
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A+ + K++ P TYN+++ C + ++ EM I PN T+ I+
Sbjct: 220 DAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSIL 279
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K G+ E+A V + M K G EP + TY ++ +C QVD A R+++ ++ +G
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEK-GVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ P + YS LIN C + L A + F E+ G++P +S + L + G
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVG 392
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 138/282 (48%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + F+ LID LCK VE A EV M ++ +PDI +Y+ +++G+ +
Sbjct: 264 MVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQ 323
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ ++D G +P++ SY I+IN +C K +A++LF E+ KP + T
Sbjct: 324 VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYST 383
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL R+ +A + F + + G P+ ++ ++ Y + +A + ++ +
Sbjct: 384 ILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N Y +V++ L K R EA+++F+++ G P V TY +++ FC D
Sbjct: 444 EDTNISFYTVVINGLCKNDRVREAHAIFEKLP-SIGLIPDVRTYNVMITGFCREGLFDEV 502
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
I +M+ G Y+ ++ +K+ + + +EM
Sbjct: 503 KGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 2/234 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P V+ + + + K Y V LFREM S I + N R+ A
Sbjct: 60 PSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSV 119
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-PNTRTYDIVLHHLI 196
K G T+N ++G ++ DA + ++ + I PN Y V++ L
Sbjct: 120 LPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLS 179
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K G TE+ S+ R+ + T+P V TY IV+ C + +D A+ + +EMK + + P +
Sbjct: 180 KRGHTEKTLSLL-RIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNI 238
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
Y++LI+ LC + + EM+++ I P FS L L EG E A
Sbjct: 239 FTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDA 292
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%)
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
D+AV LF M PS F L + + K S + F + + G N V
Sbjct: 44 DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+YC RI+ A+ ++ K GI N T++ +L L + +A +FK++ R+
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
EP Y V+ + + + M+ P + YS +I++LC + LD A
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
EM I P +++L L G E L ++ L P V
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNV 273
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
VE A +F K+++ R D +I YT+++ G + + + ++ ++ G PDV +Y +
Sbjct: 429 VEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNV 488
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
MI C +DE + R+ME C + + ++ G ++SE + F + RG
Sbjct: 489 MITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548
Query: 146 FEPEAPTYNAVVGA 159
F +A T ++
Sbjct: 549 FSFDATTTGVLINV 562
>gi|297807171|ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317306|gb|EFH47728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 602
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 162/316 (51%), Gaps = 4/316 (1%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDK---MKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
EL L+D LCK +V A ++ M + P ++ + ILL GW + + L
Sbjct: 210 SELKLLEVLLDALCKEGYVREASVYLERRRGMMDSNWVPSVRIFNILLNGWFRSRKLKQA 269
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ EMK +P VV+YG +I +C +R + A+E+ EM+ + + +F +I+G
Sbjct: 270 EKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVEIAMEILEEMKMAEMELTFMVFNPIIDG 329
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
LG RLSEAL + P TYN++V +C + + A +++ M G+ P
Sbjct: 330 LGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVEPT 389
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+ + K +TEE +++ ++ + G P TY ++++M C + ++ +A+++
Sbjct: 390 TSTYNHFFKYFSKHNKTEEGMNLYFKLI-EAGHSPDRLTYHLILKMLCEDGKLSLAIQVN 448
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EMK RG+ P + + L++ LC D L++A + F + GI P F + LR +
Sbjct: 449 KEMKNRGIDPDLLTTTMLMHLLCRLDMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSK 508
Query: 305 GMEETAVVLAQKIDKL 320
GM + A L+ + L
Sbjct: 509 GMTDMAKRLSSLMSSL 524
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 94/216 (43%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID L ++ + A + ++ P I +Y L++ + + +L +++ + M
Sbjct: 323 FNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP +Y + +E + L+ ++ P + ++ L + +LS
Sbjct: 383 TRGVEPTTSTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLS 442
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+Q + K RG +P+ T ++ C + +A+ D + GI P T+ ++
Sbjct: 443 LAIQVNKEMKNRGIDPDLLTTTMLMHLLCRLDMLEEAFEEFDNAVRRGIIPQYITFKMID 502
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
+ L G T+ A + MS P ++ +TY V
Sbjct: 503 NGLRSKGMTDMAKRLSSLMSSLPHSKKLPNTYREAV 538
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 20/251 (7%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
D+ + + LLE N++ + + + + G EP + + + S+ +V +
Sbjct: 69 DLSTISNLLE----NTNVVPGSSLESALDETGIEPSLQLVQALFDRLSSSPMLLHSVFKW 124
Query: 104 REMEATNCKPSPHIFCTLINGL--GSEKRLSEALQFFGQSKKRGFE-PEAPTYNAVVGAY 160
EM+ SP +F ++IN L E ++ +L F G A T+ ++ Y
Sbjct: 125 AEMKP-GFTLSPSLFDSVINSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRY 183
Query: 161 CWSMRINDAYRMMDEMRK----CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ + A R + R C + +++L L K G EA SV+ + R+ G
Sbjct: 184 ARAGMVQQAIRAFEFARSYEPVCKSASELKLLEVLLDALCKEGYVREA-SVY--LERRRG 240
Query: 217 TE-----PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
P+V + I++ + + ++ A ++W+EMKA V P + Y TLI C +
Sbjct: 241 MMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRR 300
Query: 272 LDDACKYFQEM 282
++ A + +EM
Sbjct: 301 VEIAMEILEEM 311
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 6/145 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ +N K E ++ K+ + PD +Y ++L+ + L
Sbjct: 385 GVEPTTSTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLA 444
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V +EMK+ G +PD+++ ++++ C +EA E F P F + NG
Sbjct: 445 IQVNKEMKNRGIDPDLLTTTMLMHLLCRLDMLEEAFEEFDNAVRRGIIPQYITFKMIDNG 504
Query: 125 LGSE------KRLSEALQFFGQSKK 143
L S+ KRLS + SKK
Sbjct: 505 LRSKGMTDMAKRLSSLMSSLPHSKK 529
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 159/311 (51%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ +N LID LCKS +E A+++ + M KR+ P++ +Y L+ G+ +
Sbjct: 199 MSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGC 258
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ M G PDVV++ +I+ C + D+A E+ M+ C P+ +
Sbjct: 259 TGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNV 318
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL R +EA + + RG P+ TYN+++G +C + +I A+++ + M + G
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y + L+K+ R +EA+++ M G P + T+ ++ C + ++D A
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMF-DAGAIPNLFTFNSLMEGLCCSRRLDEA 437
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M+ G P Y L+ LC ++DDA + M+ GI+P +
Sbjct: 438 RHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHT 497
Query: 301 LRDEGMEETAV 311
L EG ++ A+
Sbjct: 498 LAREGKQDLAL 508
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 149/277 (53%), Gaps = 4/277 (1%)
Query: 14 NRLIDTLCKSRHVERAQEVF-DKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N L+ TL K+R +A ++F D++ + D + +Y L+ G+ + ++ ++ EMK
Sbjct: 73 NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G PDVV++ ++ A C+ A++ FR E+ C P +F L++GL +LS
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILVHGLCKANQLS 190
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA Q + +RG P+ TYN+++ C S R+ +A ++++ M K + PN TY+ ++
Sbjct: 191 EARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLI 250
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K G T A+ + +RM + GT P V T+ ++ FC +++D A + MK
Sbjct: 251 YGYCKTGCTGLAHQLIERMI-QSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLC 309
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + Y+ LI+ LC + ++AC+ EM GI P
Sbjct: 310 APNLVTYNVLISGLCDAGRANEACELLSEMDGRGILP 346
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 147/322 (45%), Gaps = 34/322 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYT----------------------- 49
+N LI CK+ +ERA ++ +MK+R PD+ +++
Sbjct: 108 YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV 167
Query: 50 ----------ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
IL+ G + L ++ EM + G PDVV+Y +I+ C + R +EA
Sbjct: 168 ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEA 227
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+L M +P+ + TLI G A Q + + G P+ T+N+++
Sbjct: 228 RQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISG 287
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+C +I+ A ++ M+K PN TY++++ L AGR EA + M + G P
Sbjct: 288 FCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGR-GILP 346
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
+ TY ++ +FC N Q++ A +I + M RGV+P Y TL +L ++ D+A
Sbjct: 347 DIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALL 406
Query: 280 QEMLDIGIRPPGQLFSNLKQAL 301
M D G P F++L + L
Sbjct: 407 DNMFDAGAIPNLFTFNSLMEGL 428
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 66 EVYR-EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++R E+ + + ++Y +I C A + A +L EM+ P +++
Sbjct: 90 QIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQA 149
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + LS A+Q+F +S + P++ +N +V C + ++++A +M++EM + GI P+
Sbjct: 150 LCNTGNLSRAMQYFRESVE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPD 207
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L K+ R EEA + + M ++ P + TY ++ +C +A ++
Sbjct: 208 VVTYNSLIDGLCKSYRMEEARQLLETMVKRK-VRPNLVTYNTLIYGYCKTGCTGLAHQLI 266
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M G P + +++LI+ C + K+D AC+ M P ++ L L D
Sbjct: 267 ERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDA 326
Query: 305 GMEETAVVLAQKID 318
G A L ++D
Sbjct: 327 GRANEACELLSEMD 340
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T + +L L+KA R +AY +F+ + TY ++ FC ++ A ++
Sbjct: 68 NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EMK RG P + +S+++ +LC+ L A +YF+E ++ P LF+ L L
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGL 183
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 5/177 (2%)
Query: 152 TYNAVVGAYCWSMRINDAYRMM-DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
T N ++ + R + AY++ DE+ N TY+ ++ KAG E A+ +
Sbjct: 71 TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAE 130
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M + G P V T+ +V+ C + AM+ + E + P +++ L++ LC +
Sbjct: 131 MKER-GHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLCKAN 187
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDKLRKTPLV 326
+L +A + +EM + GI P +++L L + MEE +L + + + LV
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLV 244
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L FN L++ LC SR ++ A+ + M++ DP +Y +L+ G + +
Sbjct: 413 GAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM---EATNCKPS 114
EV M +G +P V S G +++ + D A+ F ++ E+ C PS
Sbjct: 473 KEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPS 525
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 158/305 (51%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G ++ + LID LC + +++A+E++ KM+ PD+ +Y L+ +G +
Sbjct: 288 MEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGD 347
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ + EM+ DG+ PDVV+Y I++ A C + + D+A ++ M P+ H + T
Sbjct: 348 LETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNT 407
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + +RL EAL+ F + G P A +Y + Y A ++M+K G
Sbjct: 408 LISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRG 467
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + L+ L + GR EA +F + G P TY ++++ + Q+D A
Sbjct: 468 IMPSIAACNASLYSLAEMGRIREAKDIFNDI-HNCGLSPDSVTYNMMMKCYSKAGQIDKA 526
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM + G P + + ++LI++L ++D+A + F + D+ + P ++ L
Sbjct: 527 TKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITG 586
Query: 301 LRDEG 305
L EG
Sbjct: 587 LGKEG 591
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 170/339 (50%), Gaps = 17/339 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + ++ L+ L + R ++ ++M+ P+I +YTI + G+ +
Sbjct: 222 GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDA 281
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M+D+G PDVV+Y ++I+A C+A + D+A EL+ +M A++ KP + TL++
Sbjct: 282 YGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSK 341
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
G+ L +F+ + + G+ P+ TY +V A C S +++ A+ M+D MR GI PN
Sbjct: 342 FGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPN 401
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L+ R +EA +F M G PT +Y + + + + A+ +
Sbjct: 402 LHTYNTLISGLLNLRRLDEALELFNNM-ESLGVAPTAYSYVLFIDYYGKLGDPEKALDTF 460
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP--------------P 290
++MK RG++P + + + SL ++ +A F ++ + G+ P
Sbjct: 461 EKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKA 520
Query: 291 GQL--FSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
GQ+ + L + EG E +V+ ID L K VD
Sbjct: 521 GQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVD 559
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 151/297 (50%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + +N L+D KS+ ++ E++++M R P+I ++ I++ + +
Sbjct: 814 MKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNS 873
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++Y E+ F P +YG +I A R +EA+++F EM CKP+ I+
Sbjct: 874 INKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNI 933
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING G ++ A F + K G P+ +Y +V + R++DA +E++ G
Sbjct: 934 LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T +Y+++++ L K+ R EEA S+F M + G P + TY ++ F VD A
Sbjct: 994 LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNR-GISPELYTYNALILHFGNAGMVDQA 1052
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++++E++ G+ P + Y+ LI D A F++M+ +G P F+ L
Sbjct: 1053 GKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 2/296 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
LI LCK + A+++FDK K P +SY L++G + +++ EMK+
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G P++ +Y ++++AH +KR DE EL+ EM CKP+ +I+ L +++A
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L + + F P TY ++G + R +A ++ +EM PN Y+I+++
Sbjct: 878 LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
KAG A +FKRM K G P + +Y I+V +VD A+ ++E+K G+ P
Sbjct: 938 FGKAGNVNIACDLFKRMI-KEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDP 996
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
Y+ +IN L +L++A F EM + GI P ++ L + GM + A
Sbjct: 997 DTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQA 1052
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 143/330 (43%), Gaps = 41/330 (12%)
Query: 1 MDKFGLKQELPDF-------NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLE 53
+ F + +LP+ N +++ L VE VFD M+K+ + + +Y + +
Sbjct: 106 LSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFK 165
Query: 54 GWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
+ + +M+ GF + SY +I EA+++++ M + KP
Sbjct: 166 ALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKP 225
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
S + L+ LG + + + + G P TY + + RI+DAY ++
Sbjct: 226 SMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGIL 285
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM---SRKP--------------- 215
M G GP+ TY +++ L AG+ ++A ++ +M S KP
Sbjct: 286 KTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNY 345
Query: 216 ----------------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
G P V TY I+V C + +VD A + D M+ RG++P +H Y
Sbjct: 346 GDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTY 405
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+TLI+ L + +LD+A + F M +G+ P
Sbjct: 406 NTLISGLLNLRRLDEALELFNNMESLGVAP 435
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 144/318 (45%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + ID K E+A + F+KMKKR P I + L +
Sbjct: 428 MESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGR 487
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ ++ + G PD V+Y +M+ + A + D+A +L EM + C+P + +
Sbjct: 488 IREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNS 547
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ EA Q FG+ K P TYN ++ ++ A + M++ G
Sbjct: 548 LIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG 607
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT T++ +L L K + A +F RM+ P V TY ++ + A
Sbjct: 608 CPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIM-NCSPDVLTYNTIIYGLIKEGRAGYA 666
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML-DIGIRPPGQLFSNLKQ 299
+ +MK + + P TL+ + + +++DA K E + G++ Q++ L +
Sbjct: 667 FWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELME 725
Query: 300 ALRDEGMEETAVVLAQKI 317
+ E E A+ A+ +
Sbjct: 726 CILIEAEIEEAISFAEGL 743
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 135/289 (46%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G +N LI L + + A +V+ +M P +K+Y+ L+ G++++
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++ EM+ G P++ +Y I I A R D+A + + ME C P +
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV 302
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + +L +A + + + + +P+ TY ++ + + R EM G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY I++ L K+G+ ++A+ + M R G P + TY ++ ++D A
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVM-RVRGIVPNLHTYNTLISGLLNLRRLDEA 421
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +++ M++ GV P + Y I+ + A F++M GI P
Sbjct: 422 LELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMP 470
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 154/349 (44%), Gaps = 37/349 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + N + +L + + A+++F+ + PD +Y ++++ + +
Sbjct: 463 MKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQ 522
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM +G EPD++ +I+ A R DEA ++F ++ P+ +
Sbjct: 523 IDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNI 582
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GLG E +L +AL FG K+ G P T+NA++ C + ++ A +M M
Sbjct: 583 LITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMN 642
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI-------------- 226
P+ TY+ +++ LIK GR A+ + +M +K + V+ Y +
Sbjct: 643 CSPDVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAI 701
Query: 227 -VVRMFCYNAQVDMAMRIWDEMK---------------ARGVLPVM-----HMYSTLINS 265
+V F + + + + ++W E+ A G++ ++ LI
Sbjct: 702 KIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRV 761
Query: 266 LCHEDKLDDACKYFQEML-DIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
LC + K DA K F + +G P + ++ L L + E A+ L
Sbjct: 762 LCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKL 810
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 136/317 (42%), Gaps = 36/317 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G ++ + L++ LCKS V++A ++ D M+ R P++ +Y L+ G +
Sbjct: 358 MEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRR 417
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ M+ G P SY + I+ + ++A++ F +M+ PS
Sbjct: 418 LDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNA 477
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ L R+ EA F G P++ TYN ++ Y + +I+ A +++ EM G
Sbjct: 478 SLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEG 537
Query: 181 -----------------------------------IGPNTRTYDIVLHHLIKAGRTEEAY 205
+ P TY+I++ L K G+ +A
Sbjct: 538 CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKAL 597
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F M ++ G P T+ ++ C N VD+A++++ M P + Y+T+I
Sbjct: 598 DLFGSM-KESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYG 656
Query: 266 LCHEDKLDDACKYFQEM 282
L E + A ++ +M
Sbjct: 657 LIKEGRAGYAFWFYHQM 673
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N +I+ L KSR +E A +F +MK R P++ +Y L+ +G +
Sbjct: 993 GLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQA 1052
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+++ E++ G EP+V +Y +I H + D A +F++M C P+ F L N
Sbjct: 1053 GKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 2/239 (0%)
Query: 87 INAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
I A S + A+ F+ + + N +P ++ L R+ + F +K+
Sbjct: 93 IGALKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQV 152
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
TY + A I A + +MR+ G N +Y+ +++ L++ G +EA
Sbjct: 153 INRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEAL 212
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
V+KRM + G +P++ TY ++ M + +EM+ G+ P ++ Y+ I
Sbjct: 213 KVYKRMISE-GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRV 271
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L ++DDA + M D G P ++ L AL G + A L K+ P
Sbjct: 272 LGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKP 330
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 155/290 (53%), Gaps = 1/290 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK V +A++V + + P Y L+ G+ Q ++L ++ +MK
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PD ++Y +IN C + +A +L EME + PS F TLI+ G+ +L +
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+++G + + ++ +VV A+C + +I +A ++D+M + PN + Y+ ++
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
I++G TE+A+ + ++M + G ++ TY ++++ C ++Q+D A + ++ +G+ P
Sbjct: 520 IESGDTEQAFLLVEKM-KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ Y+T+I++ C++ D A + QEM GIRP + + L AL G
Sbjct: 579 VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 628
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 141/296 (47%), Gaps = 1/296 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +N LI+ C+ R + A +F++MK R PD +Y L+ G + + +
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM+ G +P V ++ +I+A+ +A + ++ + +M+ K F +++
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ EA+ + P A YN+++ AY S A+ ++++M+ G+ +
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 543
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+++L L ++ + +EA + + R G P V +Y ++ C D A+ +
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTL-RNQGLRPDVVSYNTIISACCNKGDTDKALELL 602
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
EM G+ P + Y TL+++L ++ D +Q+ML + P ++ + A
Sbjct: 603 QEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 658
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 160/355 (45%), Gaps = 36/355 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N L+ LC++ ++ + + D+M PD +Y+IL +G + +M
Sbjct: 259 GPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTM 318
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ E G + I++N C + +A ++ + T P+ I+ TLING
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 378
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L A F Q K R P+ TYNA++ C + A ++ EM K G+ P+
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ AG+ E+ ++V M +K G + V ++ VV+ FC N ++ A+ I
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQK-GIKSDVISFGSVVKAFCKNGKIPEAVAIL 497
Query: 245 DEMKARGVLPVMHMYSTLINS-----------------------------------LCHE 269
D+M + V P +Y+++I++ LC
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRS 557
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++D+A + + + G+RP ++ + A ++G + A+ L Q+++K P
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 132/275 (48%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ LCK V +A+++ +M+K DP ++++ L++ +G L V +M+
Sbjct: 407 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 466
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + DV+S+G ++ A C + EAV + +M + P+ ++ ++I+
Sbjct: 467 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTE 526
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + K G TYN ++ C S +I++A ++ +R G+ P+ +Y+ ++
Sbjct: 527 QAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 586
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
G T++A + + M+ K G PT+ TY +V +V ++ +M + V
Sbjct: 587 SACCNKGDTDKALELLQEMN-KYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNV 645
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
P +Y ++++ + +EM + GI
Sbjct: 646 EPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 148/340 (43%), Gaps = 36/340 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I L +S A +VFD+M P+ +Y +++G + +L + + +M
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG +P++V+Y ++++ C A R DE L EM + + P + L +GL
Sbjct: 257 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 316
Query: 133 EALQFFGQSKKR-----------------------------------GFEPEAPTYNAVV 157
L F +S K+ G P YN ++
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 376
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + A+ + ++M+ I P+ TY+ +++ L K +A + M K G
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM-EKSGV 435
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P+V T+ ++ + Q++ + +M+ +G+ + + +++ + C K+ +A
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+M+ + P Q+++++ A + G E A +L +K+
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 535
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 124/290 (42%), Gaps = 4/290 (1%)
Query: 43 PDIKSYTILLEG-WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
PD SY +++ G W K ++ +V+ EM D G P+ ++Y MI+ H +
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDAL-KVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 250
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L +M KP+ + L++GL R+ E + P+ TY+ +
Sbjct: 251 LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 310
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ + E K G+ T I+L+ L K G+ +A V + M G PT
Sbjct: 311 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE-MLVHTGLVPTT 369
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
Y ++ +C + A I+++MK+R + P Y+ LIN LC + + A E
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 429
Query: 282 MLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTPLVDRGQ 330
M G+ P + F+ L A G +E+ VL+ K K+ ++ G
Sbjct: 430 MEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGS 479
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 112/257 (43%), Gaps = 3/257 (1%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P + S +LLE + + + G PD ++ ++ A +A D A+ +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 103 FREMEATNCKPSPHIFC--TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
R M + P P F +I GL + S+AL+ F + G P TYN ++ +
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
+ +R+ D+M G PN TY+++L L +AGR +E + M+ P
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASH-SMFPD 298
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
TY I+ + + ++ E +GV+ + S L+N LC + K+ A + +
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358
Query: 281 EMLDIGIRPPGQLFSNL 297
++ G+ P +++ L
Sbjct: 359 MLVHTGLVPTTVIYNTL 375
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 104/252 (41%), Gaps = 36/252 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ F ++ CK+ + A + D M + P+ + Y +++ + + +
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +MK+ G +V+Y +++ C + + DEA EL +
Sbjct: 525 TEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL-------------- 570
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ +G P+ +YN ++ A C + A ++ EM K G
Sbjct: 571 ---------------------RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P RTY ++ L AGR + ++++M K EP+ S Y I+V +
Sbjct: 610 IRPTLRTYHTLVSALASAGRVHDMECLYQQMLHK-NVEPSSSIYGIMVDAYVRCENDSKV 668
Query: 241 MRIWDEMKARGV 252
+ EM +G+
Sbjct: 669 ASLKKEMSEKGI 680
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P + N ++ + + R D + G P+T ++ V+ + AG + A ++
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 208 FKRMSRKPGTEPTVS-TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+RM R G P + +Y +V+ + + A++++DEM GV+P Y+T+I+
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVL 313
L+ + +ML G +P ++ L L G M+ET V++
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLM 287
>gi|326524037|dbj|BAJ97029.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 599
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 155/291 (53%), Gaps = 9/291 (3%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
K+ HV A+ + ++++ R ++ YT LL GW + L V MK G PDVV
Sbjct: 170 KTGHVAAAERLVEELQPR-LPLSLRHYTALLYGWCRLAKLDEAKHVLARMKAAGVAPDVV 228
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+ ++ + R+++A EL REME +C P+ + TL+ GLGS+ R+ E ++ F +
Sbjct: 229 VFNTLLAGFVADGRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSKGRVDEVMRVFVEM 288
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--IGPNTRTYDIVLHHLIKAG 199
+++G P++ TY +V A+C + R++ Y +D M + G + P V H K
Sbjct: 289 RRKGCTPDSVTYGTLVTAFCKAGRLSQGYEFLDSMSRDGLRVDPGVYLGFFVAHE--KEQ 346
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+ EE + +RM R+ P ++ Y +V+R+ C + A+ +W+E + G+ P + +
Sbjct: 347 QLEECLELMERM-RECRCPPDLNIYNVVIRLSCKLGETKQAIALWNETENSGLSPGVDTF 405
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIG--IRPPGQLFSNLKQAL-RDEGME 307
+ ++N L + L DAC YF++M+ G + P + +L AL RDE +E
Sbjct: 406 AIMVNGLVGQGSLVDACNYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLE 456
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 144/318 (45%), Gaps = 1/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ FN L+ E A E+ +M++R P+ SYT L++G G +
Sbjct: 218 MKAAGVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSKGR 277
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + V+ EM+ G PD V+YG ++ A C A R + E M + P ++
Sbjct: 278 VDEVMRVFVEMRRKGCTPDSVTYGTLVTAFCKAGRLSQGYEFLDSMSRDGLRVDPGVYLG 337
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
E++L E L+ + ++ P+ YN V+ C A + +E G
Sbjct: 338 FFVAHEKEQQLEECLELMERMRECRCPPDLNIYNVVIRLSCKLGETKQAIALWNETENSG 397
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ P T+ I+++ L+ G +A + FK M R P + ++ + ++++
Sbjct: 398 LSPGVDTFAIMVNGLVGQGSLVDACNYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLEL 457
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A +W + +RG + ++ I++L + + +AC Y +ML+ G+ P F+ L +
Sbjct: 458 AKDVWGCIASRGCELNVSAWTIWIHALYAKKHVKEACSYCLDMLEAGLMPQPDTFAKLMK 517
Query: 300 ALRDEGMEETAVVLAQKI 317
L+ + A + +K+
Sbjct: 518 GLKKLYNRQIAAEITEKV 535
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
Y A++ +C ++++A ++ M+ G+ P+ ++ +L + GR E+A+ + + M
Sbjct: 195 YTALLYGWCRLAKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVADGRFEDAFELAREME 254
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
R+ P +Y +++ +VD MR++ EM+ +G P Y TL+ + C +L
Sbjct: 255 RR-DCPPNAVSYTTLMQGLGSKGRVDEVMRVFVEMRRKGCTPDSVTYGTLVTAFCKAGRL 313
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++ M G+R ++ A E E + L +++ + R P
Sbjct: 314 SQGYEFLDSMSRDGLRVDPGVYLGFFVAHEKEQQLEECLELMERMRECRCPP 365
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 15/322 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L +N +I C S A+++ +M +R+ PD+ +Y L+ + ++
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y EM G P+ ++Y MI+ C R D A +F M C P+ F T
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G KR+ + ++ + + G + TYN ++ + +N A ++ EM G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRM 230
+ P+ T D +L L G+ ++A +FK M + G EP V TY I++
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A +++EM RG++P YS++I+ LC + +LD+A + F M P
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 291 GQLFSNL-----KQALRDEGME 307
F+ L K D+G+E
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLE 602
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 161/318 (50%), Gaps = 2/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ FN L+ LC V A +F +M + P++ ++T L+ G ++
Sbjct: 140 LTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
++ + M +DG +P ++YG +++ C A+ L R+M E ++ P+ I+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L + R S+A F + +++G P+ TYN+++ +C S R +DA +++ EM +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I P+ TY+ +++ +K G+ EA ++ M + G P TY ++ FC ++D
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDA 378
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ M +G P + ++TLI+ C ++DD + EM + G+ ++ L
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 300 ALRDEGMEETAVVLAQKI 317
G A+ L Q++
Sbjct: 439 GFYLVGDLNAALDLLQEM 456
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 142/287 (49%), Gaps = 2/287 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF +L+ + + + ++ KM++++ DI S+TIL++ + L + ++
Sbjct: 81 DFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 140
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G PDVV++ +++ C R EA+ LF +M T C+P+ F TL+NGL E R+
Sbjct: 141 TKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRI 200
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYDI 190
EA+ + + G +P TY +V C A ++ +M + I PN Y
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L K GR +A ++F M K G P + TY ++ FC + + A ++ EM R
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ P + Y+ LIN+ E K +A + + EML GI P +S++
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 157/351 (44%), Gaps = 47/351 (13%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ K A+E++D+M R P+ +Y+ +++G+ +Q L + ++ M
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+++++ +I+ +C AKR D+ +EL EM T + TLI+G L+
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC-----------GI 181
AL + G P+ T + ++ C + ++ DA M M+K G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ +TY+I++ LI G+ EA +++ M + G P TY ++ C +++D A
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD--------------------------- 274
+++D M ++ P + ++TLIN C ++DD
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Query: 275 --------ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
A FQEM+ G+ P N+ L + + AV + +K+
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 131/282 (46%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ +E A ++F M + R P + + L+ + + + +Y++M+ D+ S+
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+I CS + A+ F ++ P F TL++GL E R+SEAL F Q +
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P T+ ++ C RI +A ++D M + G+ P TY ++ + K G T
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++ ++M P V Y ++ C + + A ++ EM+ +G+ P + Y+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C + DA + QEML+ I P ++ L A EG
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 12/289 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L FN LID C ++ ++ E+ +M + D +Y L+ G+ +L +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-----------NCKP 113
++ +EM G PD+V+ +++ C + +A+E+F+ M+ + +P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ LI+GL +E + EA + + + RG P+ TY++++ C R+++A +M
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
D M PN T+ +++ KAGR ++ +F M R+ G TY ++ F
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR-GIVANAITYITLICGFRK 628
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ A+ I+ EM + GV P ++ L +++L A +++
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 13/313 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLS 63
GL+ + ++D +CK A + KM++ P++ Y+ +++ +
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM++ G PD+ +Y MI CS+ R+ +A +L +EM P + LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E + EA + + + RG P TY++++ +C R++ A M M G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++ ++ A R ++ + M+ + G +TY ++ F ++ A+ +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDI-----GIRPPGQ 292
EM + G+ P + TL++ LC KL DA + F+ M LD G+ P Q
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 293 LFSNLKQALRDEG 305
++ L L +EG
Sbjct: 513 TYNILISGLINEG 525
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 130/275 (47%), Gaps = 2/275 (0%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
L G+ + K L +++ +M P VV + ++ +R D + L+++ME
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
+ + F LI S +L AL FG+ K G P+ T+N ++ C R+++A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ +M + PN T+ +++ L + GR EA ++ RM + G +PT TY +V
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MEDGLQPTQITYGTIVDG 228
Query: 231 FCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C A+ + +M + ++P + +YS +I+SLC + + DA F EM + GI P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++++ G A L Q++ + + +P
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 158/314 (50%), Gaps = 5/314 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + FN +ID LCK ++ A E D+M K+ F+P++ +YTIL++G+ +Q +
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V M G + V Y +I A C + +A++++ EM + CKP + F +LI G
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ EAL + G TYN ++ A+ I A +++ EMR G +
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE--PTVSTYEIVVRMFCYNAQVDMAMR 242
TY+ ++ L K G TE+ + ++M G E P++++ I++ FC +V+ A++
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMF---GEEIFPSINSCNILINSFCRTGKVNDALQ 603
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+M RG+ P + Y++LIN LC + +A F + GI P ++ L
Sbjct: 604 FLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYC 663
Query: 303 DEGMEETAVVLAQK 316
EG+ A L K
Sbjct: 664 YEGLFNDACQLLFK 677
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 154/302 (50%), Gaps = 2/302 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDK-MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N LI+ S E A+++ K M F+PD ++ I+++G ++ L+S E EM
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GFEP+V++Y I+I+ C ++EA ++ M A + + LI L + ++
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ALQ +G+ +G +P+ T+N+++ C + ++ +A + +M G+ NT TY+ +
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H ++ ++A + M R G TY +++ C + + + ++M
Sbjct: 519 IHAFLRLELIQQADKLVGEM-RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ P ++ + LINS C K++DA ++ ++M+ G+ P +++L L G + A+
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637
Query: 312 VL 313
L
Sbjct: 638 NL 639
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 153/316 (48%), Gaps = 10/316 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ FN +I LCK+ + A ++ D+M R F D L+ G L M
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHG------LCRM 318
Query: 65 NEV--YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL-FREMEATNCKPSPHIFCTL 121
+V R M P+ V Y +IN + + R++EA +L ++ M +P F +
Sbjct: 319 GKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIM 378
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL + L AL+F + K+GFEP TY ++ +C +A ++++ M G+
Sbjct: 379 IDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGL 438
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
NT Y+ ++ L K G+ ++A ++ MS K G +P + T+ ++ C N +++ A+
Sbjct: 439 SLNTVGYNCLIGALCKDGKIQDALQMYGEMSSK-GCKPDIYTFNSLIYGLCKNDKMEEAL 497
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ +M GV+ Y+TLI++ + + A K EM G ++ L +AL
Sbjct: 498 GLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKAL 557
Query: 302 RDEGMEETAVVLAQKI 317
G E + L +++
Sbjct: 558 CKTGATEKCLGLIEQM 573
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 137/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + + LID CK H E A +V + M + + Y L+ +
Sbjct: 398 MVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGK 457
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++Y EM G +PD+ ++ +I C + +EA+ L+R+M + + T
Sbjct: 458 IQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNT 517
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ + + +A + G+ + RG + TYN ++ A C + ++++M
Sbjct: 518 LIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + +I+++ + G+ +A + M ++ G P + TY ++ C + A
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQR-GLTPDIVTYNSLINGLCKMGRFQEA 636
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +++ ++A+G+ P Y+TLI+ C+E +DAC+ + + G P
Sbjct: 637 LNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIP 685
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 149/345 (43%), Gaps = 37/345 (10%)
Query: 1 MDKFGLKQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D +G+ P F N +++ L + A VF M R P + ++ ++++ +
Sbjct: 153 LDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCM 212
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ S + R+M G P+ + Y ++I+A R +EA++L EM C+P
Sbjct: 213 VNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQT 272
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGF------------------------------- 146
F +I+GL R+ EA + + R F
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP 332
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMM-DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P YN ++ Y S R +A ++ M G P+ T++I++ L K G A
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
M +K G EP V TY I++ FC + A ++ + M A+G+ Y+ LI +
Sbjct: 393 EFLDEMVKK-GFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGA 451
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEET 309
LC + K+ DA + + EM G +P F++L L +++ MEE
Sbjct: 452 LCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 128/268 (47%), Gaps = 9/268 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL +N LI LCK ++ A +++ +M + PDI ++ L+ G +
Sbjct: 433 MSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDK 492
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +YR+M +G + V+Y +I+A + +A +L EM C +
Sbjct: 493 MEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 121 LINGL----GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
LI L +EK L Q FG+ P + N ++ ++C + ++NDA + + +M
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEE----IFPSINSCNILINSFCRTGKVNDALQFLRDM 608
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G+ P+ TY+ +++ L K GR +EA ++F + K G P TY ++ +CY
Sbjct: 609 IQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK-GIHPDAVTYNTLISRYCYEGL 667
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+ A ++ + + G +P +S LIN
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILIN 695
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G+ +N LI + +++A ++ +M+ R D +Y L++ G +
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L + E +M + P + S I+IN+ C + ++A++ R+M P + +L
Sbjct: 567 LGLIE---QMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSL 623
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
INGL R EAL F + +G P+A TYN ++ YC+ NDA +++ + G
Sbjct: 624 INGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGF 683
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVF 208
PN T+ I++++ +K E +++
Sbjct: 684 IPNEITWSILINYFVKNNSDSEQFTIL 710
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 143/389 (36%), Gaps = 103/389 (26%)
Query: 26 VERAQEVFDKMK-KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG--------- 75
V + ++F+K +R + Y +L++ G ++++ ++MKD+G
Sbjct: 74 VPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFI 133
Query: 76 ---------------------------FEPDVVSYGIMI--------------------- 87
FEP SY +++
Sbjct: 134 LIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLS 193
Query: 88 --------------NAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
A C D A L R+M C P+ I+ LI+ L R++E
Sbjct: 194 RGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNE 253
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR---------------- 177
A++ + G EP+ T+N V+ C + RI++A ++ D M
Sbjct: 254 AMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMH 313
Query: 178 -KCGIG--------------PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
C +G PNT Y+ +++ + +GR EEA + + G EP
Sbjct: 314 GLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAF 373
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
T+ I++ C + A+ DEM +G P + Y+ LI+ C + ++A K M
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433
Query: 283 LDIGIRPPGQLFSNLKQALRDEGMEETAV 311
G+ ++ L AL +G + A+
Sbjct: 434 SAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 154/319 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + N L++ C + A + D+M + + PD ++T L+ G Q
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 195
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G +PD+V+YG +IN C D A+ L +ME + I+ T
Sbjct: 196 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL K + +A F + + +G +P+ TYN ++ C R +DA R++ +M +
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ ++ ++ +K G+ EA ++ M + P V Y +++ FC +V+
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M ++ EM RG++ Y+TLI+ D+A F++M+ G+ P ++ L
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 301 LRDEGMEETAVVLAQKIDK 319
L + G ETA+V+ + + K
Sbjct: 436 LCNNGNVETALVVFEYMQK 454
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 156/310 (50%), Gaps = 2/310 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +L + +I+ LCK + A + +KM+K + + D+ Y +++G + K++
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ +M+ G +PDV +Y +I+ C+ R+ +A L +M N P F LI+
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 125 LGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E +L EA + + + K + P+ YN ++ +C R+ + + EM + G+
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
NT TY ++H +A + A VFK+M G P + TY I++ C N V+ A+ +
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++ M+ R + + Y+T+I +LC K++D F + G++P ++ +
Sbjct: 449 FEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Query: 304 EGMEETAVVL 313
+G++E A L
Sbjct: 509 KGLKEEADAL 518
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 2/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K ++ +N LI LC A + M ++ +PD+ + L++ + ++
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335
Query: 61 LLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L+ ++Y EM K PDVV+Y +I C KR +E +E+FREM + +
Sbjct: 336 LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TLI+G + A F Q G P+ TYN ++ C + + A + + M+K
Sbjct: 396 TLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR 455
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ + TY ++ L KAG+ E+ + +F +S K G +P V TY ++ FC +
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEE 514
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ EMK G LP Y+TLI + + + + +EM G F +
Sbjct: 515 ADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Query: 300 ALRDEGMEET 309
L D ++++
Sbjct: 575 MLHDGRLDKS 584
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 160/324 (49%), Gaps = 14/324 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M+K ++ ++ +N +ID LCK +H++ A ++F+KM+ + PD+ +Y L+
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKP 113
W LLS +M + PD+V + +I+A + EA +L+ EM ++ +C P
Sbjct: 301 WSDASRLLS------DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ TLI G KR+ E ++ F + +RG TY ++ + + ++A +
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+M G+ P+ TY+I+L L G E A VF+ M ++ + + TY ++ C
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD-MKLDIVTYTTMIEALCK 473
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+V+ ++ + +GV P + Y+T+++ C + ++A F EM + G P
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 294 FSNLKQALRDEGMEETAVVLAQKI 317
++ L +A +G E + L +++
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEM 557
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 1/228 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P +V + +++A ++D + L +M+ + + + IN +LS AL
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G+ K G+ P T N+++ +C RI++A ++D+M + G P+T T+ ++H L +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
+ EA ++ +RM K G +P + TY V+ C + D+A+ + ++M+ + +
Sbjct: 193 HNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+Y+T+I+ LC +DDA F +M GI+P ++ L L + G
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYG 299
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 132/275 (48%), Gaps = 1/275 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ +F++L+ + K + + ++M+ ++ +Y+I + + ++ L +
Sbjct: 74 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+ P +V+ ++N C R EAV L +M +P F TL++GL
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ SEA+ + +G +P+ TY AV+ C + A ++++M K I + Y
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 253
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ L K ++A+ +F +M K G +P V TY ++ C + A R+ +M
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+ + P + ++ LI++ E KL +A K + EM+
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 6/279 (2%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSM 64
+ +L FN LID K + A++++D+M K + PD+ +Y L++G+ + K +
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV+REM G + V+Y +I+ A+ D A +F++M + P + L++G
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + AL F +KR + + TY ++ A C + ++ D + + + G+ PN
Sbjct: 436 LCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ + G EEA ++F M ++ G P TY ++R + + +
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEM-KEDGPLPNSGTYNTLIRARLRDGDEAASAELI 554
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
EM++ G + L+ ++ H+ +LD K F +ML
Sbjct: 555 KEMRSCGFAGDASTFG-LVTNMLHDGRLD---KSFLDML 589
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 1/280 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A +F M K R P I ++ LL + + + +M++ G ++ +Y I
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
IN C + A+ + +M PS +L+NG R+SEA+ Q + G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++P+ T+ +V + ++A +++ M G P+ TY V++ L K G + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ +M K E V Y ++ C +D A ++++M+ +G+ P + Y+ LI+
Sbjct: 236 NLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC+ + DA + +ML+ I P F+ L A EG
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 1/205 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LI ++R + AQ VF +M PDI +Y ILL+G N
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + V+ M+ + D+V+Y MI A C A + ++ +LF + KP+ + T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++G + EA F + K+ G P + TYN ++ A + ++ EMR CG
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAY 205
+ T+ +V +++ GR ++++
Sbjct: 562 FAGDASTFGLV-TNMLHDGRLDKSF 585
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 15/322 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L +N +I C S A+++ +M +R+ PD+ +Y L+ + ++
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y EM G P+ ++Y MI+ C R D A +F M C P+ F T
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G KR+ + ++ + + G + TYN ++ + +N A ++ EM G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRM 230
+ P+ T D +L L G+ ++A +FK M + G EP V TY I++
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A +++EM RG++P YS++I+ LC + +LD+A + F M P
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 291 GQLFSNL-----KQALRDEGME 307
F+ L K D+G+E
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLE 602
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 161/318 (50%), Gaps = 2/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ FN L+ LC V A +F +M + P++ ++T L+ G ++
Sbjct: 140 ITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
++ + M +DG +P ++YG +++ C A+ L R+M E ++ P+ I+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L + R S+A F + +++G P+ TYN+++ +C S R +DA +++ EM +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I P+ TY+ +++ +K G+ EA ++ M + G P TY ++ FC ++D
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDA 378
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ M +G P + ++TLI+ C ++DD + EM + G+ ++ L
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 300 ALRDEGMEETAVVLAQKI 317
G A+ L Q++
Sbjct: 439 GFYLVGDLNAALDLLQEM 456
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 142/287 (49%), Gaps = 2/287 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF +L+ + + + ++ KM++++ DI S+TIL++ + L + ++
Sbjct: 81 DFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKI 140
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G PDVV++ +++ C R EA+ LF +M T C+P+ F TL+NGL E R+
Sbjct: 141 TKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRI 200
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYDI 190
EA+ + + G +P TY +V C A ++ +M + I PN Y
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSA 260
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L K GR +A ++F M K G P + TY ++ FC + + A ++ EM R
Sbjct: 261 IIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ P + Y+ LIN+ E K +A + + EML GI P +S++
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 157/351 (44%), Gaps = 47/351 (13%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ K A+E++D+M R P+ +Y+ +++G+ +Q L + ++ M
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+++++ +I+ +C AKR D+ +EL EM T + TLI+G L+
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC-----------GI 181
AL + G P+ T + ++ C + ++ DA M M+K G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ +TY+I++ LI G+ EA +++ M + G P TY ++ C +++D A
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD--------------------------- 274
+++D M ++ P + ++TLIN C ++DD
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Query: 275 --------ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
A FQEM+ G+ P N+ L + + AV + +K+
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 131/282 (46%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ +E A ++F M + R P + + L+ + + + +Y++M+ D+ S+
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+I CS + A+ F ++ P F TL++GL E R+SEAL F Q +
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P T+ ++ C RI +A ++D M + G+ P TY ++ + K G T
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++ ++M P V Y ++ C + + A ++ EM+ +G+ P + Y+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C + DA + QEML+ I P ++ L A EG
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 12/289 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L FN LID C ++ ++ E+ +M + D +Y L+ G+ +L +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-----------NCKP 113
++ +EM G PD+V+ +++ C + +A+E+F+ M+ + +P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ LI+GL +E + EA + + + RG P+ TY++++ C R+++A +M
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
D M PN T+ +++ KAGR ++ +F M R+ G TY ++ F
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR-GIVANAITYITLICGFRK 628
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ A+ I+ EM + GV P ++ L +++L A +++
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 13/313 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLS 63
GL+ + ++D +CK A + KM++ P++ Y+ +++ +
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM++ G PD+ +Y MI CS+ R+ +A +L +EM P + LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E + EA + + + RG P TY++++ +C R++ A M M G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++ ++ A R ++ + M+ + G +TY ++ F ++ A+ +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDI-----GIRPPGQ 292
EM + G+ P + TL++ LC KL DA + F+ M LD G+ P Q
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 293 LFSNLKQALRDEG 305
++ L L +EG
Sbjct: 513 TYNILISGLINEG 525
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 130/275 (47%), Gaps = 2/275 (0%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
L G+ + K L +++ +M P VV + ++ +R D + L+++ME
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
+ + F LI S +L AL FG+ K G P+ T+N ++ C R+++A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ +M + PN T+ +++ L + GR EA ++ RM + G +PT TY +V
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MEDGLQPTQITYGTIVDG 228
Query: 231 FCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C A+ + +M + ++P + +YS +I+SLC + + DA F EM + GI P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++++ G A L Q++ + + +P
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 15/322 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L +N +I C S A+++ +M +R+ PD+ +Y L+ + ++
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y EM G P+ ++Y MI+ C R D A +F M C P+ F T
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G KR+ + ++ + + G + TYN ++ + +N A ++ EM G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRM 230
+ P+ T D +L L G+ ++A +FK M + G EP V TY I++
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A +++EM RG++P YS++I+ LC + +LD+A + F M P
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 291 GQLFSNL-----KQALRDEGME 307
F+ L K D+G+E
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLE 602
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 165/358 (46%), Gaps = 37/358 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ F L+ LC V A +F +M + P++ ++T L+ G ++
Sbjct: 140 ITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFC 119
++ + M +DG +P ++YG +++ C A+ L R+ME ++ P+ I+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L + R S+A F + +++G P+ TYN+++ +C S R +DA +++ EM +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I P+ TY+ +++ +K G+ EA ++ M + G P TY ++ FC ++D
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDA 378
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD------------------------- 274
A ++ M +G P + ++TLI+ C ++DD
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 275 ----------ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
A QEM+ G+ P L L D G + A+ + + + K +K
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 163/353 (46%), Gaps = 37/353 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----- 55
M++ ++ ++ FN LI C + A F K+ K PD+ ++T LL G
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164
Query: 56 -GQQKNLLS-----------------MNEVYRE------------MKDDGFEPDVVSYGI 85
+ NL MN + RE M +DG +P ++YG
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224
Query: 86 MINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
+++ C A+ L R+M E ++ P+ I+ +I+ L + R S+A F + +++
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+ TYN+++ +C S R +DA +++ EM + I P+ TY+ +++ +K G+ EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
++ M + G P TY ++ FC ++D A ++ M +G P + ++TLI+
Sbjct: 345 EELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
C ++DD + EM + G+ ++ L G A+ L Q++
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 157/351 (44%), Gaps = 47/351 (13%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ K A+E++D+M R P+ +Y+ +++G+ +Q L + ++ M
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+++++ +I+ +C AKR D+ +EL EM T + TLI+G L+
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC-----------GI 181
AL + G P+ T + ++ C + ++ DA M M+K G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ +TY+I++ LI G+ EA +++ M + G P TY ++ C +++D A
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLDEAT 566
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD--------------------------- 274
+++D M ++ P + ++TLIN C ++DD
Sbjct: 567 QMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGF 626
Query: 275 --------ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
A FQEM+ G+ P N+ L + + AV + +K+
Sbjct: 627 RKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 131/282 (46%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ +E A ++F M + R P + + L+ + + + +Y++M+ D+ S+
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+I CS + A+ F ++ P F TL++GL E R+SEAL F Q +
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P T+ ++ C RI +A ++D M + G+ P TY ++ + K G T
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++ ++M P V Y ++ C + + A ++ EM+ +G+ P + Y+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C + DA + QEML+ I P ++ L A EG
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 12/289 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L FN LID C ++ ++ E+ +M + D +Y L+ G+ +L +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-----------NCKP 113
++ +EM G PD+V+ +++ C + +A+E+F+ M+ + +P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ LI+GL +E + EA + + + RG P+ TY++++ C R+++A +M
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
D M PN T+ +++ KAGR ++ +F M R+ G TY ++ F
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR-GIVANAITYITLICGFRK 628
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ A+ I+ EM + GV P ++ L +++L A +++
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 13/313 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLS 63
GL+ + ++D +CK A + KM++ P++ Y+ +++ +
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM++ G PD+ +Y MI CS+ R+ +A +L +EM P + LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E + EA + + + RG P TY++++ +C R++ A M M G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++ ++ A R ++ + M+ + G +TY ++ F ++ A+ +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDI-----GIRPPGQ 292
EM + G+ P + TL++ LC KL DA + F+ M LD G+ P Q
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 293 LFSNLKQALRDEG 305
++ L L +EG
Sbjct: 513 TYNILISGLINEG 525
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 129/275 (46%), Gaps = 2/275 (0%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
L G+ + K L +++ +M P VV + ++ +R D + L+++ME
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
+ + F LI S +L AL FG+ K G P+ T+ ++ C R+++A
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ +M + PN T+ +++ L + GR EA ++ RM + G +PT TY +V
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MEDGLQPTQITYGTIVDG 228
Query: 231 FCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C A+ + +M + ++P + +YS +I+SLC + + DA F EM + GI P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++++ G A L Q++ + + +P
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 15/322 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +L +N +I C S A+++ +M +R+ PD+ +Y L+ + ++
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y EM G P+ ++Y MI+ C R D A +F M C P+ F T
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G KR+ + ++ + + G + TYN ++ + +N A ++ EM G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRM 230
+ P+ T D +L L G+ ++A +FK M + G EP V TY I++
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A +++EM RG++P YS++I+ LC + +LD+A + F M P
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 291 GQLFSNL-----KQALRDEGME 307
F+ L K D+G+E
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLE 602
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 162/318 (50%), Gaps = 2/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ FN L+ LC V A +F +M + P++ ++T L+ G ++
Sbjct: 140 ITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGR 199
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
++ + M +DG +P ++YG +++ C A++L R+M E ++ P+ I+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYS 259
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L + R S+A F + +++G P+ TYN+++ +C S R +DA +++ EM +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I P+ TY+ +++ +K G+ EA ++ M + G P TY ++ FC ++D
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDA 378
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ M +G P + ++TLI+ C ++DD + EM + G+ ++ L
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 300 ALRDEGMEETAVVLAQKI 317
G A+ L Q++
Sbjct: 439 GFYLVGDLNAALDLLQEM 456
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 144/290 (49%), Gaps = 8/290 (2%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF +L+ + + + ++ KM++++ DI S+TIL++ + L + ++
Sbjct: 81 DFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKI 140
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G PDVV++ +++ C R EA+ LF +M T C+P+ F TL+NGL E R+
Sbjct: 141 TKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRI 200
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK----CGIGPNTRT 187
EA+ + + G +P TY +V C +I D +D +RK I PN
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMC---KIGDTVSALDLLRKMEEISHIIPNVVI 257
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ L K GR +A ++F M K G P + TY ++ FC + + A ++ EM
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEK-GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEM 316
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R + P + Y+ LIN+ E K +A + + EML GI P +S++
Sbjct: 317 LERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSM 366
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 160/358 (44%), Gaps = 47/358 (13%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ ++ +N LI+ K A+E++D+M R P+ +Y+ +++G+ +Q L +
Sbjct: 321 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAE 380
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ M G P+++++ +I+ +C AKR D+ +EL EM T + TLI+G
Sbjct: 381 HMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC------ 179
L+ AL + G P+ T + ++ C + ++ DA M M+K
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDA 500
Query: 180 -----GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
G+ P+ +TY+I++ LI G+ EA +++ M + G P TY ++ C
Sbjct: 501 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQ 559
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD-------------------- 274
+++D A +++D M ++ P + ++TLIN C ++DD
Sbjct: 560 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 619
Query: 275 ---------------ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
A FQEM+ G+ P N+ L + + AV + +K+
Sbjct: 620 ITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ +E A ++F M + R P + + L+ + + + +Y++M+ D+ S+
Sbjct: 58 KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+I CS + A+ F ++ P F TL++GL E R+SEAL F Q +
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P T+ ++ C RI +A ++D M + G+ P TY ++ + K G T
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVS 237
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A + ++M P V Y ++ C + + A ++ EM+ +G+ P + Y+++I
Sbjct: 238 ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C + DA + QEML+ I P ++ L A EG
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 12/289 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L FN LID C ++ ++ E+ +M + D +Y L+ G+ +L +
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-----------NCKP 113
++ +EM G PD+V+ +++ C + +A+E+F+ M+ + +P
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ LI+GL +E + EA + + + RG P+ TY++++ C R+++A +M
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
D M PN T+ +++ KAGR ++ +F M R+ G TY ++ F
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR-GIVANAITYITLICGFRK 628
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ A+ I+ EM + GV P ++ L +++L A +++
Sbjct: 629 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 143/313 (45%), Gaps = 13/313 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLS 63
GL+ + ++D +CK A ++ KM++ P++ Y+ +++ +
Sbjct: 214 GLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM++ G PD+ +Y MI CS+ R+ +A +L +EM P + LIN
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E + EA + + + RG P TY++++ +C R++ A M M G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++ ++ A R ++ + M+ + G +TY ++ F ++ A+ +
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHEMT-ETGLVADTTTYNTLIHGFYLVGDLNAALDL 452
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDI-----GIRPPGQ 292
EM + G+ P + TL++ LC KL DA + F+ M LD G+ P Q
Sbjct: 453 LQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQ 512
Query: 293 LFSNLKQALRDEG 305
++ L L +EG
Sbjct: 513 TYNILISGLINEG 525
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 130/275 (47%), Gaps = 2/275 (0%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
L G+ + K L +++ +M P VV + ++ +R D + L+++ME
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
+ + F LI S +L AL FG+ K G P+ T+N ++ C R+++A
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ +M + PN T+ +++ L + GR EA ++ RM + G +PT TY +V
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRM-MEDGLQPTQITYGTIVDG 228
Query: 231 FCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C A+ + +M + ++P + +YS +I+SLC + + DA F EM + GI P
Sbjct: 229 MCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++++ G A L Q++ + + +P
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 149/297 (50%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + +N ++ LCK R ++A+EVF M + PD++S+ IL+ G+ +
Sbjct: 218 MANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGE 277
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + Y+EM+ PDVVS+ +I D A REM+ P I+
Sbjct: 278 VKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTM 337
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G +SEAL+ + G P+ TYN ++ C R+ DA ++++EM + G
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG 397
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ ++H + G E A +F + R+ P V TY ++ C + A
Sbjct: 398 VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR-LRPDVVTYNSLIDGMCRKGDLAKA 456
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+WD+M AR +LP YS LI+S C + +++DA + EM+ G P + ++++
Sbjct: 457 NELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSI 513
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 146/308 (47%), Gaps = 2/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ + ++ FN LI C+ V+ A + + +M+ R PD+ S++ L+ + ++
Sbjct: 253 MDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGE 312
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ REMK G PD V Y ++I C A EA+ + EM C P + T
Sbjct: 313 MDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNT 372
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL + RL +A + + ++RG P+ T+ ++ YC +A ++ D + +
Sbjct: 373 LLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR 432
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ + + G +A ++ M + P TY I++ C QV+ A
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE-ILPNHITYSILIDSHCEKGQVEDA 491
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
DEM +G LP + Y+++I C + ++ Q+M + P F+ L
Sbjct: 492 FGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG 551
Query: 301 -LRDEGME 307
+++E M
Sbjct: 552 YIKEENMH 559
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 140/289 (48%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FG ++ +N L++ LCK + A+++ ++M++R PD+ ++T L+ G+ +Q N
Sbjct: 358 MVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGN 417
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ + PDVV+Y +I+ C +A EL+ +M A P+ +
Sbjct: 418 FENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSI 477
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ + ++ +A F + K+G P TYN+++ YC S + + + +MR+
Sbjct: 478 LIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDN 537
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T++ ++H IK A++VF M K P TY +++ F + A
Sbjct: 538 VFPDLITFNTLIHGYIKEENMHGAFNVFNIME-KEMVRPDAVTYNMIINGFSEQGNMQDA 596
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
R++ M G+ P + Y +LIN A + EM+ G P
Sbjct: 597 GRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 141/289 (48%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + + +I C++ + A V D+M PD+ +Y LL G +Q
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHR 382
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL ++ EM++ G PD+ ++ +I+ +C ++ A++LF + +P + +
Sbjct: 383 LLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNS 442
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ + L++A + + R P TY+ ++ ++C ++ DA+ +DEM K G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN RTY+ ++ ++G ++ ++M R+ P + T+ ++ + + A
Sbjct: 503 NLPNIRTYNSIIKGYCRSGNVKKGQQFLQKM-RQDNVFPDLITFNTLIHGYIKEENMHGA 561
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+++ M+ V P Y+ +IN + + DA + F+ M D GI P
Sbjct: 562 FNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEP 610
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 138/353 (39%), Gaps = 44/353 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLE-----GWGQQKNLLSMNEV 67
F+ LI T +SR A E F + R + LL GW E
Sbjct: 90 FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQ-----EA 144
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
YR + E + + IM++++C +D A + EME P LI+
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFR 204
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+ A+ RG +P TYN+V+ C R + A + M +C + P+ R+
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS------------------------- 222
++I++ + G +EA +K M + T VS
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324
Query: 223 ---------TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
Y +V+ FC + A+R+ DEM G LP + Y+TL+N LC + +L
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
DA K EM + G+ P F+ L +G E A+ L + + R P V
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDV 437
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
D ++ LP+ ++ LID+ C+ VE A D+M K+ P+I++Y +++G+ +
Sbjct: 461 DDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRS 520
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
N+ + ++M+ D PD++++ +I+ + + A +F ME +P +
Sbjct: 521 GNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTY 580
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+ING + + +A + F G EP+ TY +++ + + A+++ DEM
Sbjct: 581 NMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIH 640
Query: 179 CGIGPNTR 186
G P+ +
Sbjct: 641 RGFAPDDK 648
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D+ K LP+ +N +I C+S +V++ Q+ KM++ PD+ ++ L+ G+ +
Sbjct: 495 LDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIK 554
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
++N+ V+ M+ + PD V+Y ++IN +A +F+ M + +P +
Sbjct: 555 EENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYT 614
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+ +LING + +A Q + RGF P+
Sbjct: 615 YMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 160/316 (50%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + ++ LI LC A + M +R+ +PD+ +++ L++ + ++
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++Y EM +P +V+Y +IN C R DEA ++F M + +C P + T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + +RG TY ++ + + A + EM G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +L L K G+ E+A VF+ + R EPT+ TY I++ C +V+
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+T+I+ C + ++A F+EM + G P ++ L +A
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 301 -LRDEGMEETAVVLAQ 315
LRD E +A ++ +
Sbjct: 581 RLRDGDREASAELIKE 596
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 142/297 (47%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID K + A++++D+M KR DP I +Y+ L+ G+ L +++ M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDVVSY +I C AKR DE +ELFREM + + TLI GL
Sbjct: 389 SKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCD 448
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G P TYN ++ C + ++ A + + +++ + P TY+I++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAG+ E+ + +F +S K G +P V Y ++ FC + A ++ EMK G
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
LP Y+TLI + + + + + +EM G + L D ++++
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 143/276 (51%), Gaps = 1/276 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +L + +++ LCK + A + +KM++ + +P + YT +++G + K++
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDA 275
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G P+VV+Y +I+ C+ R+ +A L +M P F LI+
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + KR +P TY++++ +C R+++A +M + M P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y ++ KA R +E +F+ MS++ TV TY +++ DMA I+
Sbjct: 396 VVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIQGLFQAGDCDMAQEIF 454
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
EM + GV P + Y+TL++ LC KL+ A F+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 159/360 (44%), Gaps = 34/360 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + + L++ C S+ + A + D+M + P+ ++ L+ G
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G +PD+V+YG+++N C D A L +ME +P I+ T
Sbjct: 202 ASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTT 261
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL K + +AL F + + +G P TY++++ C R +DA R++ +M +
Sbjct: 262 IIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK---PGTE------------------- 218
I P+ T+ ++ +K G+ EA ++ M ++ P
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 219 ------------PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
P V +Y +++ FC +VD M ++ EM RG++ Y+TLI L
Sbjct: 382 QMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGL 441
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
D A + F+EM+ G+ P ++ L L G E A+V+ + + + + P +
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 154/311 (49%), Gaps = 13/311 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQKNLLSMNE 66
+ +ID LCK++H++ A +F +M+ + P++ +Y+ L+ W LLS
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS--- 315
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+M + PDV ++ +I+A + EA +L+ EM + PS + +LING
Sbjct: 316 ---DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL EA Q F + P+ +Y+ ++ +C + R+++ + EM + G+ NT
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ L +AG + A +FK M G P + TY ++ C N +++ AM +++
Sbjct: 433 TYTTLIQGLFQAGDCDMAQEIFKEMV-SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
++ + P ++ Y+ +I +C K++D F + G++P ++ + +G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 307 EETAVVLAQKI 317
+E A L +++
Sbjct: 552 KEEADALFKEM 562
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ LI+ C+ + A V KM K ++P+I + + LL G+ K
Sbjct: 107 MQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M G++P+ V++ +I+ + EAV L M A C+P +
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGV 226
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL A + ++ EP Y ++ C + ++DA + EM G
Sbjct: 227 VVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY ++ L GR +A + M + P V T+ ++ F ++ A
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEA 345
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++DEM R + P + YS+LIN C D+LD+A + F+ M+ P +S L +
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKG 405
Query: 301 L-----RDEGME 307
DEGME
Sbjct: 406 FCKAKRVDEGME 417
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 119/228 (52%), Gaps = 1/228 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P ++ + +++A ++D + L +M+ + + + LIN +L AL
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G+ K G+EP T ++++ YC S RI++A ++D+M G PNT T++ ++H L
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
+ EA ++ RM K G +P + TY +VV C D+A + ++M+ + P +
Sbjct: 199 HNKASEAVALIDRMVAK-GCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVL 257
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+Y+T+I+ LC +DDA F+EM GIRP +S+L L + G
Sbjct: 258 IYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 142/286 (49%), Gaps = 1/286 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+F++L+ + K + + ++M+ + +Y+IL+ + ++ L V +M
Sbjct: 83 EFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKM 142
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G+EP++V+ ++N +C +KR EAV L +M T +P+ F TLI+GL +
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
SEA+ + +G +P+ TY VV C + A+ ++++M + + P Y +
Sbjct: 203 SEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTI 262
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K ++A ++FK M K G P V TY ++ C + A R+ +M R
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ P + +S LI++ E KL +A K + EM+ I P +S+L
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A +F +M K R P I ++ LL + + + +M++ G + +Y I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C + A+ + +M +P+ +L+NG KR+SEA+ Q G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++P T+N ++ + ++A ++D M G P+ TY +V++ L K G T+ A+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ +M + EP V Y ++ C N +D A+ ++ EM+ +G+ P + YS+LI+
Sbjct: 242 ILLNKMEQGK-LEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC+ + DA + +M++ I P FS L A EG
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 112/228 (49%), Gaps = 4/228 (1%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K PD ++ LI CK++ V+ E+F +M +R + +YT L++G Q +
Sbjct: 390 KHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDM 449
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E+++EM DG P++++Y +++ C + ++A+ +F ++ + +P+ + + +I
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G+ ++ + F +G +P+ YN ++ +C +A + EM++ G P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
N+ Y+ ++ ++ G E + + K M R G ST +V M
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEM-RSCGFAGDASTIGLVTNML 616
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+D LCK+ +E+A VF+ +++ + +P I +Y I++EG + +
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + G +PDVV+Y MI+ C +EA LF+EM+ P+ + TLI
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+ + + + + GF +A T V
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 2/204 (0%)
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL SE +L +A+ FG+ K P ++ ++ A + + + ++M+ G+
Sbjct: 55 NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMP 113
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
N TY I+++ + + A +V +M K G EP + T ++ +C++ ++ A+
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKM-MKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D+M G P ++TLI+ L +K +A M+ G +P + + L
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 303 DEGMEETAVVLAQKIDKLRKTPLV 326
G + A +L K+++ + P V
Sbjct: 233 KRGDTDLAFILLNKMEQGKLEPGV 256
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N +I C+ E A +F +MK+ P+ Y L+ + + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 65 NEVYREMKDDGFEPDVVSYGIMIN 88
E+ +EM+ GF D + G++ N
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTN 614
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 152/290 (52%), Gaps = 4/290 (1%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+K K +PD F+ L+D CK +++ A+ V M K+ PD+ +Y+ L++G+
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ ++ M G +V SY IMIN C K DEA++LF+EM P
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LI+GL R+S AL+ + RG +P+ TYN+++ A C ++ A ++ +++
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLK 570
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI P+ TY I++ L ++G+ E+A VF+ + K G V Y ++++ FC
Sbjct: 571 GQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVK-GYNLDVYAYTVMIQGFCDKGLF 629
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
D A+ + +M+ G +P Y +I SL +D+ D A K +EM+ G+
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 153/312 (49%), Gaps = 4/312 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD +N +ID +CK +HV A +++ + +R PD+ +Y L+ G+ L ++
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ +M PDV ++ I+++ C EA + M + KP + +L++G
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+++A F RG +YN ++ +C +++A ++ EM I P+ T
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ L K+GR A + M + G +P + TY ++ C VD A+ + ++
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYR-GQQPDIITYNSILDALCKKHHVDKAITLLTKL 569
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
K +G+ P M+ Y+ L+ LC KL+DA K F+++L G ++ + Q D+G+
Sbjct: 570 KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629
Query: 308 ETAVVLAQKIDK 319
+ A+ L K+++
Sbjct: 630 DEALALLSKMEE 641
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 1/315 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + + I C + +A DK+ F D SY L+ G +
Sbjct: 256 KNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETK 315
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ E+ R +PDVV Y +I+ C K ++A +L+ E + P + LI
Sbjct: 316 AALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALI 375
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +L +A+ F + + P+ T++ +V +C I +A ++ M K I
Sbjct: 376 SGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIK 435
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ TY ++ +A S+F MS + G V +Y I++ FC VD AM+
Sbjct: 436 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHR-GVTANVQSYNIMINGFCKIKMVDEAMK 494
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ EM + + P + YS+LI+ LC ++ A + EM G +P ++++ AL
Sbjct: 495 LFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALC 554
Query: 303 DEGMEETAVVLAQKI 317
+ + A+ L K+
Sbjct: 555 KKHHVDKAITLLTKL 569
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 162/330 (49%), Gaps = 4/330 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+FG+ ++ N L+DTLCK + V+RA+ VF +++ PD S+ L+ GW Q +
Sbjct: 221 MDQFGVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGV-VPPDESSFNTLVHGWCQARM 279
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +EM++ GF P V++Y +I A+C K + + EM + C+P+ +
Sbjct: 280 LNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTI 339
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ LG R EAL F + K+ G P+A YN+++ + R+ DA + DEM + G
Sbjct: 340 VMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTG 399
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P ++ ++ + E A + +M + +P + TY ++++ C + +
Sbjct: 400 IPPTVAIFNTMISAACDHSQAENALKILVKMEEQ-SCKPDIKTYTPLLKLCCKRQWMKIL 458
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M + + P Y L+ LC K +C + +EM+ G P + F + +
Sbjct: 459 PFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFDLVMEK 518
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L D+G +A Q + KLR L G
Sbjct: 519 L-DKGNLHSAKKKIQHL-KLRAAALKHTGS 546
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 111/276 (40%), Gaps = 35/276 (12%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y +M++ K++D L R+M+ C S ++ L R ++A+ F +
Sbjct: 163 YNLMVDILGKFKQFDLLWGLIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFNKMD 222
Query: 143 KRG----------------------------------FEPEAPTYNAVVGAYCWSMRIND 168
+ G P+ ++N +V +C + +N+
Sbjct: 223 QFGVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGVVPPDESSFNTLVHGWCQARMLNE 282
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A M EM + G P+ TY ++ + Y++ M K G P V TY IV+
Sbjct: 283 ARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSK-GCRPNVITYTIVM 341
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+ A+ ++D++K G +P Y+++I L +L+DA F EM GI
Sbjct: 342 HALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIP 401
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P +F+ + A D E A+ + K+++ P
Sbjct: 402 PTVAIFNTMISAACDHSQAENALKILVKMEEQSCKP 437
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 97/222 (43%), Gaps = 2/222 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + ++ L K+ + A +VFDK+K+ PD Y ++ G+ L
Sbjct: 329 GCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDA 388
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N V+ EM G P V + MI+A C + + A+++ +ME +CKP + L+
Sbjct: 389 NSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLK- 447
Query: 125 LGSEKRLSEALQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +++ + L F ++ P+ TY +V C + + + ++EM G P
Sbjct: 448 LCCKRQWMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMP 507
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
T+D+V+ L K + R + T S+Y
Sbjct: 508 KQETFDLVMEKLDKGNLHSAKKKIQHLKLRAAALKHTGSSYS 549
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 154/296 (52%), Gaps = 1/296 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN +I +C+ V++A E+ ++M + PD ++ I+++G + + +EV R +
Sbjct: 256 SFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRL 315
Query: 72 KDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ DG P+VV++ +I+ +C A + ++A+ ++ +M A+ P+ + LING G
Sbjct: 316 QRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGD 375
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L A++ + Q + P+ T+++++ YC +++DA R+ +M + I PN T+ I
Sbjct: 376 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 435
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++H L K R++EA + ++ +P P Y V+ + C +VD A I M+ +
Sbjct: 436 IIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 495
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
G P + Y+ LI C + ++ +A +F EM++ G P + L GM
Sbjct: 496 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 551
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 128/256 (50%), Gaps = 3/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQK 59
M++FG + N ++D LC++ V R EV ++++ P++ ++T ++ G+ +
Sbjct: 280 MNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 339
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L VY +M G P+ V+Y ++IN + AVE++++M C P F
Sbjct: 340 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 399
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-K 178
+LI+G +L +AL+ + + +P T++ ++ + C R ++A +++E+ +
Sbjct: 400 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLR 459
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P Y+ V+ L K G+ +EA + K M K G P TY I++ +C +++
Sbjct: 460 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK-GCRPDKYTYTILIIGYCMKSRIS 518
Query: 239 MAMRIWDEMKARGVLP 254
A+ + EM G P
Sbjct: 519 EAIMFFHEMVEAGCSP 534
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
++I LC+S A ++FD+M + PD + + L+ L + + + +
Sbjct: 152 QIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 211
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + +Y ++++ R + V LF R ++ P F +I G+ ++
Sbjct: 212 FGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQ 271
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-PNTRTYDIV 191
+AL+ + + G P+ T+N +V C + ++ + ++ +++ G+ PN T+ V
Sbjct: 272 KALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSV 331
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ KAG+ E+A +V+ M G P TY +++ + + A+ ++ +M
Sbjct: 332 ISGYCKAGKLEDAMAVYNDMVAS-GIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 390
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + +S+LI+ C +LDDA + + +M I+P FS + +L + + A+
Sbjct: 391 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 450
Query: 312 VLAQKID 318
L +++
Sbjct: 451 CLLNELN 457
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ +N LI+ K + A EV+ +M + R PD+ +++ L++G+ +
Sbjct: 351 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 410
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFC 119
L ++ +M +P+V ++ I+I++ C R DEA+ L E+ + P I+
Sbjct: 411 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYN 470
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L ++ EA +++G P+ TY ++ YC RI++A EM +
Sbjct: 471 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 530
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
G P++ T + + L+KAG E V + S
Sbjct: 531 GCSPDSITVNCFISCLLKAGMPNEVDHVMRLAS 563
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 160/313 (51%), Gaps = 2/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N LI+ CK +E A +V + M+ R P+ ++Y L++G+ + +N+
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKA 446
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V +M + PDVV+Y +I+ C + +D A L M P P + ++I+
Sbjct: 447 MGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDS 506
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L KR+ EA F +++ P Y A++ YC + ++N+A+ M+++M PN
Sbjct: 507 LCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPN 566
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ T++ ++H L G+ +EA + ++M K +PTVST I++ + D A R +
Sbjct: 567 SLTFNALIHGLCTDGKLKEATLLEEKMV-KIDLQPTVSTDTILIHRLLKDGDFDHAYRRF 625
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M + G P H Y+T I + C E +L DA +M + G+ P +S+L + D
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDL 685
Query: 305 GMEETAVVLAQKI 317
G +A V+ +++
Sbjct: 686 GRTNSAFVVLKRM 698
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 162/340 (47%), Gaps = 37/340 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE-- 70
+N++++ CK +VE A + + + DPD +YT L+ G+ Q+K+L S +V++E
Sbjct: 221 YNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMP 280
Query: 71 ---------------------------------MKDDGFEPDVVSYGIMINAHCSAKRYD 97
MKDD P V +Y ++I A C ++R
Sbjct: 281 LKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKS 340
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
EA+ L +EME KP+ H + LI+ L S+ +L +A + GQ ++G P TYNA++
Sbjct: 341 EALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALI 400
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC I DA +++ M + PNTRTY+ ++ K + + K + RK
Sbjct: 401 NGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERK--V 458
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P V TY ++ C + D A R+ M RG++P Y+++I+SLC ++++AC
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACD 518
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
F + + P +++ L G A ++ +K+
Sbjct: 519 LFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKM 558
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 149/301 (49%), Gaps = 2/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ L+ +N LI CK R+V +A V +KM +R+ PD+ +Y L++G + N
Sbjct: 419 MESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S + M D G PD +Y MI++ C +KR +EA +LF +E + P+ ++
Sbjct: 478 FDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTA 537
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +++EA + + P + T+NA++ C ++ +A + ++M K
Sbjct: 538 LIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKID 597
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P T I++H L+K G + AY F++M GT+P TY ++ +C ++ A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYRRFQQM-LSSGTKPDAHTYTTFIQTYCREGRLQDA 656
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +MK GV P + YS+LI + + A + M D G P F +L +
Sbjct: 657 EDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKH 716
Query: 301 L 301
L
Sbjct: 717 L 717
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 146/285 (51%), Gaps = 2/285 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+++L + V+ ++V+ +M + + P+I +Y ++ G+ + N+ N+ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G +PD +Y +I +C K D A ++F+EM C+ + + LI+GL E+R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ F + K P TY ++ A C S R ++A ++ EM + GI PN TY +++
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + E+A + +M K G P V TY ++ +C ++ A+ + + M++R +
Sbjct: 366 DSLCSQCKLEKARELLGQMLEK-GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNL 424
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P Y+ LI C + + A +ML+ + P +++L
Sbjct: 425 RPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSL 468
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 20/316 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL + + +ID+LCKS+ VE A ++FD ++++ P++ YT L++G+ +
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +M P+ +++ +I+ C+ + EA L +M + +P+
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTI 607
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + A + F Q G +P+A TY + YC R+ DA M+ +M++ G
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF--------- 231
+ P+ TY ++ GRT A+ V KRM G EP+ T+ +++
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM-HDTGCEPSQHTFLSLIKHLLEMKYGKVK 726
Query: 232 ------CYNA---QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
C + + D+ + + ++M GV P Y L+ +C L A K F M
Sbjct: 727 GGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHM 786
Query: 283 LDI-GIRPPGQLFSNL 297
GI P +F+ L
Sbjct: 787 QQKEGISPSELVFNAL 802
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 125/286 (43%), Gaps = 17/286 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K L+ + LI L K + A F +M PD +YT ++ + ++
Sbjct: 593 MVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ +MK++G PD+ +Y +I + R + A + + M T C+PS H F +
Sbjct: 653 LQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLS 712
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L K +G K +G EP + + M + ++++M + G
Sbjct: 713 LIKHLLEMK--------YG--KVKGGEPGVCVMSNM-------MEFDIVVELLEKMVEHG 755
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN ++Y+ ++ + + G A VF M +K G P+ + ++ C + + A
Sbjct: 756 VTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEA 815
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ D+M G LP + LI L + + + FQ +L G
Sbjct: 816 AKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCG 861
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 146/286 (51%), Gaps = 5/286 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G + +L F L+ +LC+ +HVE A+ +F + KK F P IKS+ I+L GW + +L
Sbjct: 212 YGFELDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVKGSLAD 270
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V+ E+ +PD+ +YG IN+ + + AV+LF M P I +I+
Sbjct: 271 AKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIID 330
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +KR+ EAL+ FG+ RG + + TYN ++ +C R+ Y ++D+M G+ P
Sbjct: 331 QLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSP 390
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY +L + ++ S+ +RM K G TY +++ ++ +
Sbjct: 391 NNMTYSYILK---TTEKPKDVISLMQRM-EKSGCRLDSDTYNLILNLYVSWDYEKGVQLV 446
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
WDEM+ G P ++ +++ L KLD+A Y++ M G+ P
Sbjct: 447 WDEMERNGSGPDQRSFTIMVHGLHSHGKLDEALHYYRTMESRGMTP 492
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 132/276 (47%), Gaps = 7/276 (2%)
Query: 46 KSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS--YGIMINAHCSAKRYDEAVELF 103
++YT +L+ G+ K + M +++ E+ + + + + + +++N + A + EA+++F
Sbjct: 147 RAYTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITNRMFAVLLNRYAGAHKVQEAIDMF 206
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
+ + + F L+ L K + EA F Q KK F P ++N ++ +C
Sbjct: 207 YKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVK 265
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ DA R+ +E+ + P+ TY ++ L K+G+ A +F M K G P V+
Sbjct: 266 GSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEK-GINPDVAI 324
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++ C+ ++ A+ I+ EM RG + Y+TLI C ++++ + +M
Sbjct: 325 CNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDME 384
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
G+ P +S + L+ + + L Q+++K
Sbjct: 385 VKGVSPNNMTYSYI---LKTTEKPKDVISLMQRMEK 417
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 5/153 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + ++ +N LI CK +E+ E+ D M+ + P+ +Y+ +L+ + K+
Sbjct: 348 MNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYSYILKTTEKPKD 407
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL-FREMEATNCKPSPHIFC 119
++S+ + M+ G D +Y +++N + S Y++ V+L + EME P F
Sbjct: 408 VISL---MQRMEKSGCRLDSDTYNLILNLYVSWD-YEKGVQLVWDEMERNGSGPDQRSFT 463
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+++GL S +L EAL ++ + RG PE T
Sbjct: 464 IMVHGLHSHGKLDEALHYYRTMESRGMTPEPRT 496
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 154/311 (49%), Gaps = 1/311 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+G+ ++ +N LI K V A EV M+ + P++ SYTIL++G+ + +
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKID 441
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
V EM DG +P+ V + +I+A C R EAVE+FREM CKP + F +LI
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL + AL G TYN ++ A+ I +A ++++EM G
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+ TY+ ++ L +AG ++A S+F++M R G P+ + I++ C + V+ A+
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
EM RG P + +++LIN LC +++D F+++ GI P F+ L L
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 303 DEGMEETAVVL 313
G A +L
Sbjct: 681 KGGFVYDACLL 691
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 155/312 (49%), Gaps = 2/312 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVF-DKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
K E+ FN LI ++ A+ V D + PD+ +Y L+ G+ ++ +
Sbjct: 350 KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
EV +M++ G +P+V SY I+++ C + DEA + EM A KP+ F LI+
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
E R+ EA++ F + ++G +P+ T+N+++ C I A ++ +M G+ NT
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ +++ ++ G +EA + M + G+ TY +++ C +VD A +++
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQ-GSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+M G P + LIN LC +++A ++ +EM+ G P F++L L G
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 306 MEETAVVLAQKI 317
E + + +K+
Sbjct: 649 RIEDGLTMFRKL 660
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 6/306 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + LI +L K V A ++ ++M PD +++ ++ G +
Sbjct: 243 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M GF PD ++YG ++N C R D A +LF + KP IF T
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNT 358
Query: 121 LINGLGSEKRLSEALQFFG-QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI+G + RL +A G P+ TYN+++ Y + A ++ +MR
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN +Y I++ K G+ +EAY+V MS G +P + ++ FC ++
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPE 477
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ I+ EM +G P ++ +++LI+ LC D++ A ++M+ G+ ++ L
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 300 ALRDEG 305
A G
Sbjct: 538 AFLRRG 543
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 31/294 (10%)
Query: 42 DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
+P KSY ++LE V+ +M P + ++G+++ A C+ D A+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L R+M C P+ I+ TLI+ L R++EALQ + G P+A T+N V+ C
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR----------- 210
RIN+A +M++ M G P+ TY +++ L K GR + A +F R
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 211 --------------------MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
M G P V TY ++ + V +A+ + +M+ +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
G P ++ Y+ L++ C K+D+A EM G++P F+ L A E
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKE 472
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 155/354 (43%), Gaps = 44/354 (12%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD FN +I LCK + A ++ ++M R F PD +Y L+ G + + + +
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCKPSPHIFCTLINGL 125
++ + +P++V + +I+ + R D+A + +M + P + +LI G
Sbjct: 344 LFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
E + AL+ + +G +P +Y +V +C +I++AY +++EM G+ PNT
Sbjct: 400 WKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
++ ++ K R EA +F+ M RK G +P V T+ ++ C ++ A+ +
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 246 EMKARGVLPVMHMYSTLIN-----------------------------------SLCHED 270
+M + GV+ Y+TLIN LC
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++D A F++ML G P + L L GM E AV +++ TP
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 1/273 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK FN LI CK + A E+F +M ++ PD+ ++ L+ G +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R+M +G + V+Y +INA EA +L EM + +
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL + +A F + + G P + N ++ C S + +A EM G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++ +++ L +AGR E+ ++F+++ + G P T+ ++ C V A
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKL-QAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
+ DE G +P +S L+ S+ ++ LD
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 114/279 (40%), Gaps = 7/279 (2%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM- 106
Y +L+ G +++ + +MKD+G + ++ + A + L EM
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+C+P+ + ++ L S A F R P T+ V+ A+C I
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+ A ++ +M K G PN+ Y ++H L K R EA + + M G P T+
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM-GCVPDAETFND 292
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
V+ C +++ A ++ + M RG P Y L+N LC ++D A F +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI---- 348
Query: 287 IRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTP 324
+P +F+ L G +++ VL+ + P
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/172 (17%), Positives = 72/172 (41%), Gaps = 1/172 (0%)
Query: 131 LSEALQFFGQS-KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+S +++ F + + G+ Y ++G + R++ +M+ GI +
Sbjct: 91 VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFI 150
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ KAG + + M EPT +Y +V+ + +A ++ +M +
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R + P + + ++ + C +++D A ++M G P ++ L +L
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 148/295 (50%), Gaps = 1/295 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K L FN +++ LCK+ +E A++VFD+M + PD+ SY LL G+ + L
Sbjct: 220 KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLA 279
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ EM G PDVV++ +I+A C A ++AV L +M + + F LI+G
Sbjct: 280 VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFC 339
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ L +AL + +K G +P YNA++ YC R++ A ++ EM + P+
Sbjct: 340 KKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVV 399
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ K G + A+ + ++M +K G P TY ++R C +++ A +++
Sbjct: 400 TYSTIISGYCKVGNLDSAFQLNQKMLKK-GVLPDAITYSSLIRGLCEEKRLNDACELFEN 458
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M GV P Y+TLI+ C E ++ A EM+ G+ P +S L L
Sbjct: 459 MLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 149/312 (47%), Gaps = 16/312 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ F LI CK+ ++E+A + +M++R + ++T L++G+ ++
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L EM+ G +P VV Y +IN +C R D A EL REMEA KP + T
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G L A Q + K+G P+A TY++++ C R+NDA + + M + G
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ K G E+A S+ M RK G P V TY +++ +A+ A
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRK-GVLPDVVTYSVLINGLSKSARTKEA 522
Query: 241 MRIWDEMKARGVLPVMHMYS---------------TLINSLCHEDKLDDACKYFQEMLDI 285
R+ ++ +P Y L+ C + + +A K +Q MLD
Sbjct: 523 HRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDR 582
Query: 286 GIRPPGQLFSNL 297
+ G ++S L
Sbjct: 583 NWKLDGSVYSIL 594
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 163/335 (48%), Gaps = 9/335 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N L+ LC +E A V M+ P+ +Y L+ + +
Sbjct: 143 MLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 202
Query: 61 LLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L V M+++G +P++V++ M+N C A R + A ++F EM P +
Sbjct: 203 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 262
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TL++G L E+L F + +RG P+ T+ +++ A C + + A ++ +MR+
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ N T+ ++ K G ++A + M RK G +P+V Y ++ +C ++D+
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEM-RKCGIQPSVVCYNALINGYCKLGRMDL 381
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + EM+A+ V P + YST+I+ C LD A + Q+ML G+ P +S+L +
Sbjct: 382 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 441
Query: 300 ALRDEG-------MEETAVVLAQKIDKLRKTPLVD 327
L +E + E + L + D+ T L+D
Sbjct: 442 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 476
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 156/341 (45%), Gaps = 16/341 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ F LID CK ++ A ++M+K P + Y L+ G+ +
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ REM+ +PDVV+Y +I+ +C D A +L ++M P + +
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL EKRL++A + F + G +P+ TY ++ +C + A + DEM + G
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSV-FKRMSRKP-------------GTEPTVSTYEI 226
+ P+ TY ++++ L K+ RT+EA+ + FK P ++ +
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVA 558
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+++ FC + A +++ M R +YS LI+ C + A + ++ML G
Sbjct: 559 LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 618
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
P +L + L +EGM A Q D L PL D
Sbjct: 619 FSPNSTSTISLVRGLFEEGMVVEADNAIQ--DLLTCCPLAD 657
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 167/395 (42%), Gaps = 77/395 (19%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G +P +N ++ L + + A+ M + P++ +Y IL+ + L
Sbjct: 113 GYAPSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA---VELFREMEATNCKPSPHIFCTL 121
V +M+ G P+ V+Y ++ A C A D A V L RE N KP+ F ++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMRE--EGNAKPNLVTFNSM 229
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+NGL R+ A + F + + G P+ +YN ++ YC ++++ + EM + G+
Sbjct: 230 VNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 289
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS----------------------------- 212
P+ T+ ++H KAG E+A ++ +M
Sbjct: 290 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALL 349
Query: 213 -----RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA------------------ 249
RK G +P+V Y ++ +C ++D+A + EM+A
Sbjct: 350 AVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYC 409
Query: 250 -----------------RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+GVLP YS+LI LC E +L+DAC+ F+ ML +G++P
Sbjct: 410 KVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF 469
Query: 293 LFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
++ L EG E A+ L ++ +RK L D
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEM--IRKGVLPD 502
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 173/346 (50%), Gaps = 42/346 (12%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ L +N +I+ LCK +V A+ + +K+ K PD +YT ++ G+ + ++L S
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE----------------------- 101
E++ M ++G EP+ +Y +IN C++ R +EA++
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVA 342
Query: 102 ------------LFREMEATNCKPSPHIFCTLINGLGSEKRLSE-ALQFFGQSKKRGFEP 148
+F +M+ CKP+ + + +LI+G +R+S A+ F + + G P
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG----QRVSRMAIGLFHRMSRDGVVP 398
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TYNA++ +M I+ A + + M K G PNT +Y+ ++ G TE+A S+
Sbjct: 399 NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSML 458
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M + T PT+ TY I+++ +C + D+A+R+ + MKA G P Y+ LI+ C
Sbjct: 459 TNMLKGRPT-PTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCK 517
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAVVL 313
K++ A F EM+D G+ P ++ L +DE ++ A +L
Sbjct: 518 ISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARML 563
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 7/292 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M + G+ +N L++ L ++ ++ A VF+ M K P+ SY L+ G+ G
Sbjct: 391 MSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGD 450
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ +SM M P +V+Y I+I +C + D A+ + M+A C+P
Sbjct: 451 TEKAMSM---LTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWS 507
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+G ++ A F + RG P TY A++ YC +++ A RM++ M+
Sbjct: 508 YTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ G PN +TY++++H L K A + K M + P V TY V+ C N +
Sbjct: 568 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEE-KISPDVVTYSTVINGLCNNGAI 626
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+A+ ++++M G LP +H YS+LI +L E ++++A + F E+ G+ P
Sbjct: 627 PLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 6/308 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K L + L+ L K + + ++ + P++ Y ++ + N+
Sbjct: 188 GPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDA 247
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ G +PD +Y MI +C + D A E+F M+ C+P+ + TLING
Sbjct: 248 ESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLING 307
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R++EAL F + + G P T+ A + A C RI DA+++ +M+K G PN
Sbjct: 308 LCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPN 367
Query: 185 TRTYDIVLHHLIKAGRTEE-AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
TY LI R A +F RMSR G P TY ++ + N ++D A+ +
Sbjct: 368 VYTYT----SLISGQRVSRMAIGLFHRMSRD-GVVPNTVTYNALMNVLMENMEIDSALIV 422
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++ M G LP Y+ LI C + A ML P ++ + + D
Sbjct: 423 FNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCD 482
Query: 304 EGMEETAV 311
G + A+
Sbjct: 483 SGDTDVAI 490
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 1/260 (0%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L +N +I C S + A V + MK PD SYT L+ G+ + + + ++
Sbjct: 470 LVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFN 529
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM D G P+ V+Y +I+ +C ++ D A + M+ + C+P+ + LI+GL +
Sbjct: 530 EMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQN 589
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
S A + + P+ TY+ V+ C + I A M ++M K G PN TY
Sbjct: 590 NFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYS 649
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ L + GR EEA +F + +K G P TY ++ + + +VD A EM
Sbjct: 650 SLIQALGQEGRVEEAEEMFSEL-KKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMIN 708
Query: 250 RGVLPVMHMYSTLINSLCHE 269
G P + Y LI L +E
Sbjct: 709 AGCQPTLQTYDVLIKGLQNE 728
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 148/324 (45%), Gaps = 11/324 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ G + ++ LI+ LC S V A + +M + P + ++T +
Sbjct: 289 MDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGR 348
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDE-AVELFREMEATNCKPSPHIFC 119
+ +++ +MK G +P+V +Y +I S +R A+ LF M P+ +
Sbjct: 349 IEDAWKIFIDMKKKGCKPNVYTYTSLI----SGQRVSRMAIGLFHRMSRDGVVPNTVTYN 404
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L+N L + AL F K G P +YN ++ YC A M+ M K
Sbjct: 405 ALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKG 464
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P TY+I++ +G T+ A V + M + G +P +Y ++ FC +++++
Sbjct: 465 RPTPTLVTYNIIIKGYCDSGDTDVAIRVLELM-KANGCQPDEWSYTELISGFCKISKMEL 523
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A +++EM RG+ P Y+ LI+ C ++KLD A + + M G RP Q ++ L
Sbjct: 524 ASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIH 583
Query: 300 ALRDE----GMEETA-VVLAQKID 318
L + G EE V+L +KI
Sbjct: 584 GLTKQNNFSGAEELCKVMLEEKIS 607
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 146/319 (45%), Gaps = 4/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + F I LC +E A ++F MKK+ P++ +YT L+ GQ+ +
Sbjct: 324 MTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS--GQRVS 381
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ +R M DG P+ V+Y ++N D A+ +F M C P+ +
Sbjct: 382 RMAIGLFHR-MSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNE 440
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + +A+ K P TYN ++ YC S + A R+++ M+ G
Sbjct: 441 LIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANG 500
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y ++ K + E A +F M + G P TY ++ +C + ++D A
Sbjct: 501 CQPDEWSYTELISGFCKISKMELASGMFNEMMDR-GLCPNEVTYTALISGYCKDEKLDCA 559
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ + MK G P + Y+ LI+ L ++ A + + ML+ I P +S +
Sbjct: 560 ARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVING 619
Query: 301 LRDEGMEETAVVLAQKIDK 319
L + G A+ + K+ K
Sbjct: 620 LCNNGAIPLALEMFNKMVK 638
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 5/205 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ GL + LI CK ++ A + ++MK+ P++++Y +L+ G +Q N
Sbjct: 532 MDR-GLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNN 590
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ + M ++ PDVV+Y +IN C+ A+E+F +M C P+ H + +
Sbjct: 591 FSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSS 650
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI LG E R+ EA + F + KK+G P+ TY ++ S +++ A+ + EM G
Sbjct: 651 LIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAG 710
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAY 205
P +TYD+ LIK + E Y
Sbjct: 711 CQPTLQTYDV----LIKGLQNEMVY 731
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 6/310 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+I + + +A D +R + +YT LL + ++ + Y ++ +G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+P+++ Y +INA C +A + ++ + KP + ++I G + L A
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAF 283
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + + G EP A TY+ ++ C S R+N+A + EM + G+ P T+ + L
Sbjct: 284 EIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVAL 343
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD-MAMRIWDEMKARGVLP 254
GR E+A+ +F M +K G +P V TY ++ +V MA+ ++ M GV+P
Sbjct: 344 CDMGRIEDAWKIFIDMKKK-GCKPNVYTYTSLIS----GQRVSRMAIGLFHRMSRDGVVP 398
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
Y+ L+N L ++D A F M G P ++ L + G E A+ +
Sbjct: 399 NTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSML 458
Query: 315 QKIDKLRKTP 324
+ K R TP
Sbjct: 459 TNMLKGRPTP 468
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 153/299 (51%), Gaps = 1/299 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K +L N +D + K+ VE+ + +F+ ++ F PD++SY+IL+ G +
Sbjct: 523 GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARET 582
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ MK GF D +Y +++ C + + +A E+ EM+ +P+ + +++G
Sbjct: 583 SNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDG 642
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL EA F ++K +G E Y++++ + RI++AY +++EM K G+ PN
Sbjct: 643 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ +L L+KA EA F+ M ++ P TY I++ C + + A W
Sbjct: 703 VYTWNSLLDALVKAEEINEALVCFQSM-KEMKCPPNTYTYSILINGLCRVQKYNKAFVFW 761
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+M+ +G++P + Y+T+I+ L + DA F+ G P F+ L + + +
Sbjct: 762 QDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSN 820
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 2/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + F L+ L + V A + D++K +PDI Y + ++ +G+ N
Sbjct: 205 MQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 264
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + E+K G +PD VSY MI C A R EA ELF +MEA P + + T
Sbjct: 265 VDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNT 324
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G GS R +A + + ++RG P ++N+++ ++++A + + M+K
Sbjct: 325 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-D 383
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ TY+I++ L GR EEAY + M P + T I+V C +++ A
Sbjct: 384 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHA-SLFPNLLTVNIMVDRLCKARKLEEA 442
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+I++ RG P Y +LI+ L + ++D+A + F++MLD G ++++L +
Sbjct: 443 YKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRN 502
Query: 301 LRDEGMEE 308
G +E
Sbjct: 503 FFIHGRKE 510
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 156/317 (49%), Gaps = 2/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + + LI L ++R ERA E+ +M++ ++ + +T L+ ++
Sbjct: 170 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 229
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+K EPD+V Y + I+ A D A + F E++A KP + +
Sbjct: 230 VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTS 289
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L RL EA + F Q + P A YN ++ Y + R DAY++++ +R+ G
Sbjct: 290 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 349
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +++ +L L K + +EA S+F+ M K EP STY I++ M C +V+ A
Sbjct: 350 CIPSVVSFNSILTCLGKKRKVDEALSLFEVM--KKDAEPNSSTYNIIIDMLCLGGRVEEA 407
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
RI DEM+ + P + + +++ LC KL++A K F+ G P + +L
Sbjct: 408 YRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDG 467
Query: 301 LRDEGMEETAVVLAQKI 317
L +G + A L +K+
Sbjct: 468 LGKKGQVDEAYRLFEKM 484
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 164/361 (45%), Gaps = 36/361 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ L L N ++D LCK+R +E A ++F+ +R +PD +Y L++G G++
Sbjct: 414 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 473
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M D G + V Y +I R ++ ++F+E+ CKP + T
Sbjct: 474 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNT 533
Query: 121 -----------------------------------LINGLGSEKRLSEALQFFGQSKKRG 145
LI+GL + E F K++G
Sbjct: 534 YMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG 593
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F +A YNAVV +C S +++ AY +++EM++ + P TY ++ L K R +EAY
Sbjct: 594 FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAY 653
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ K G E V Y ++ F ++D A I +EM +G+ P ++ +++L+++
Sbjct: 654 MLFEEAKSK-GIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDA 712
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 325
L +++++A FQ M ++ P +S L L A V Q + K P
Sbjct: 713 LVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPN 772
Query: 326 V 326
V
Sbjct: 773 V 773
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID LC VE A + D+M+ P++ + I+++ + + L +++
Sbjct: 391 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 450
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD V+Y +I+ + DEA LF +M +P ++ +LI R
Sbjct: 451 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 510
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + F + +RG +P+ N + + + + +++R G P+ R+Y I++
Sbjct: 511 DGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILI 570
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L KAG+ E ++F M ++ G Y VV FC + +V A I +EMK + V
Sbjct: 571 HGLTKAGQARETSNIFHAM-KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 629
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y +++ L D+LD+A F+E GI L+S+L G + A +
Sbjct: 630 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 689
Query: 313 LAQKIDKLRKTPLV 326
+ +++ K TP V
Sbjct: 690 ILEEMMKKGLTPNV 703
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 133/275 (48%), Gaps = 1/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N ++D CKS V +A E+ ++MK++ P + +Y +++G +
Sbjct: 589 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 648
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E K G E +VV Y +I+ R DEA + EM P+ + + +
Sbjct: 649 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 708
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + ++EAL F K+ P TY+ ++ C + N A+ +M+K G
Sbjct: 709 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 768
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ L K G +AYS+F+R G P +++ ++ + A
Sbjct: 769 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGI-PDAASFNALIEGMSNANRAMEA 827
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
++++E + RG + +L+++L + L+ A
Sbjct: 828 YQVFEETRLRGCRINIKSCISLLDALNKSECLEQA 862
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 132/270 (48%), Gaps = 2/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I + E A ++ +++++R P + S+ +L G+++ + ++ MK
Sbjct: 322 YNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK 381
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D EP+ +Y I+I+ C R +EA + EME + P+ +++ L ++L
Sbjct: 382 KDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLE 440
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + +RG P+ TY +++ ++++AYR+ ++M G N Y ++
Sbjct: 441 EAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLI 500
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ GR E+ + +FK + R+ G +P ++ + +V+ I++++++ G
Sbjct: 501 RNFFIHGRKEDGHKIFKELIRR-GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 559
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
LP + YS LI+ L + + F M
Sbjct: 560 LPDVRSYSILIHGLTKAGQARETSNIFHAM 589
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 110/216 (50%), Gaps = 4/216 (1%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V R +K F P +Y ++I A A+R + A+EL R+M+ + H+F TL+ L
Sbjct: 169 VMRRLK---FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALA 225
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
E ++++AL + K EP+ YN + + + ++ A++ E++ G+ P+
Sbjct: 226 REGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDV 285
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y ++ L KAGR EA +F +M + P Y ++ + + + A ++ +
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGSAGRFEDAYKLLER 344
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ RG +P + +++++ L + K+D+A F+ M
Sbjct: 345 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 380
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+L ++ +V EM G+ + + A A+R D+AV M +P+ +
Sbjct: 124 DLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYT 183
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI L +R AL+ Q ++ G+E + +V A ++ DA ++DE++
Sbjct: 184 VLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGS 243
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ P+ Y++ + KAG + A+ F + + G +P +Y ++ + C ++
Sbjct: 244 CLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL-KAQGLKPDDVSYTSMIWVLCKAGRLGE 302
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ +M+A +P + Y+T+I + +DA K + + + G P F+++
Sbjct: 303 AEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILT 362
Query: 300 AL 301
L
Sbjct: 363 CL 364
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
+ A + R++DA + MR+ P Y +++ L +A R E A + ++M ++
Sbjct: 150 LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-QEV 208
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G E V + +VR QV A+ + DE+K + P + +Y+ I+ +D A
Sbjct: 209 GYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMA 268
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
K+F E+ G++P ++++ L G A L +++ R P
Sbjct: 269 WKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVP 317
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 149/307 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + +N LI LC+ + A ++ ++M ++ PDI +Y +++ G + L
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N + + G PD+ +Y +++ +C + D A+EL M + P + TL+NG
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + E ++ F ++G P TYN ++ + C S ++N+A ++ EM+ G+ P+
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++ ++ K G + AY +F+ M ++ T +TY I++ F + MA+R++
Sbjct: 645 VVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLF 704
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EMK G P + Y LI+ C ++ K+ E ++ G P F + L E
Sbjct: 705 SEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVE 764
Query: 305 GMEETAV 311
+ AV
Sbjct: 765 HKVQEAV 771
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 149/313 (47%), Gaps = 36/313 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ ++ +N +I LC+ V A+E KM F+P+ +Y +++G+ ++ ++
Sbjct: 360 GLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDA 419
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR-------------------- 104
N + ++ GF+PD +Y ++N C D+A+ +F+
Sbjct: 420 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKG 479
Query: 105 ---------------EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
EM CKP + +INGL LS+A G + +G P+
Sbjct: 480 LCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPD 539
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
TYN +V YC ++++ A +++ M G+ P+ TY+ +L+ L K ++EE +FK
Sbjct: 540 IFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFK 599
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M+ K G P + TY ++ C + +V+ A+ + EMK++G+ P + + TLI C
Sbjct: 600 AMTEK-GCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKV 658
Query: 270 DKLDDACKYFQEM 282
LD A F+ M
Sbjct: 659 GDLDGAYGLFRGM 671
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 139/286 (48%), Gaps = 2/286 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ +N +I+ LCK + A + + PDI +Y L++G+ +Q L S
Sbjct: 500 GCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSA 559
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ M G PDV++Y ++N C + +E +E+F+ M C P+ + T+I
Sbjct: 560 IELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIES 619
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-CGIGP 183
L + K+++EA+ G+ K +G P+ ++ ++ +C ++ AY + M K +
Sbjct: 620 LCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSH 679
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
T TY+I++ + + A +F M +K G +P TY +++ FC V+ +
Sbjct: 680 TTATYNIIISAFSEQLNMKMALRLFSEM-KKNGCDPDNYTYRVLIDGFCKTGNVNQGYKF 738
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
E +G +P + + ++N LC E K+ +A M+ I P
Sbjct: 739 LLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVP 784
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 153/322 (47%), Gaps = 1/322 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+ L FN I LCK ++RA + + + PD+ +Y ++ G ++ ++
Sbjct: 323 KRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVV 382
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E +M + GFEP+ +Y +I+ +C +A + ++ KP +C+L+
Sbjct: 383 EAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 442
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NG + +A+ F +G P YN ++ C I A ++M+EM + G
Sbjct: 443 NGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCK 502
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ TY+++++ L K G +A + K G P + TY +V +C ++D A+
Sbjct: 503 PDIWTYNLIINGLCKMGCLSDANHLIGDAITK-GCIPDIFTYNTLVDGYCRQLKLDSAIE 561
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ + M ++G+ P + Y+TL+N LC K ++ + F+ M + G P ++ + ++L
Sbjct: 562 LVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLC 621
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
+ AV L ++ TP
Sbjct: 622 NSKKVNEAVDLLGEMKSKGLTP 643
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 145/317 (45%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD F + +N +++ L + + +A +V+ +MK ++ + D+ +YTI ++ + +
Sbjct: 181 MDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGR 240
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R M G + V+Y ++ D A ELF EM P F
Sbjct: 241 PYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNK 300
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + + E+ + F + KRG P T+N + C ++ A R++ + + G
Sbjct: 301 LVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREG 360
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ V+ L + R EA +M G EP TY ++ +C V A
Sbjct: 361 LRPDVVTYNTVICGLCRKSRVVEAEECLHKMV-NGGFEPNDFTYNSIIDGYCKKGMVVDA 419
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
RI + +G P Y +L+N C + D A F++ L G+RP +++ L +
Sbjct: 420 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKG 479
Query: 301 LRDEGMEETAVVLAQKI 317
L +G+ A+ L ++
Sbjct: 480 LCQQGLILPALQLMNEM 496
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 140/298 (46%), Gaps = 1/298 (0%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
+RA+E+FD+M + PD+ ++ L+ ++ +L ++ ++ G P++ ++ I
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIF 336
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
I C D AV L + +P + T+I GL + R+ EA + + GF
Sbjct: 337 IQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGF 396
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
EP TYN+++ YC + DA R++ + G P+ TY +++ + G ++A +
Sbjct: 397 EPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMA 456
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
VFK K G P++ Y +++ C + A+++ +EM +G P + Y+ +IN L
Sbjct: 457 VFKDGLGK-GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGL 515
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
C L DA + + G P ++ L + ++A+ L ++ TP
Sbjct: 516 CKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTP 573
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N L++ LCK+ E E+F M ++ P+I +Y ++E K +
Sbjct: 570 GMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEA 629
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCKPSPHIFCTLIN 123
++ EMK G PDVVS+G +I C D A LFR ME + + + +I+
Sbjct: 630 VDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIIS 689
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ + AL+ F + KK G +P+ TY ++ +C + +N Y+ + E + G P
Sbjct: 690 AFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ T+ VL+ L + +EA + M +K TV+T
Sbjct: 750 SLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNT 789
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 147/343 (42%), Gaps = 46/343 (13%)
Query: 16 LIDTLC-KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
L+D C K V K K+ F + +Y +L+ G M + EM+ +
Sbjct: 89 LVDVFCMKYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN 148
Query: 75 GFEPDVVSYGIMINA---HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ + G+ + A + + EAV+ F M+ NC PS + + ++N L
Sbjct: 149 --LDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYF 206
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM------------------ 173
++A + + + K + E + TY + ++C + R A R++
Sbjct: 207 NQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTV 266
Query: 174 -----------------DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
DEM +C + P+ T++ ++H L K G E+ +F ++ ++ G
Sbjct: 267 VTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKR-G 325
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P + T+ I ++ C +D A+R+ + G+ P + Y+T+I LC + ++ +A
Sbjct: 326 VCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAE 385
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ +M++ G P ++++ +GM VV A +I K
Sbjct: 386 ECLHKMVNGGFEPNDFTYNSIIDGYCKKGM----VVDANRILK 424
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 158/308 (51%), Gaps = 2/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K+G+ + N L+D L K VE A VF ++K ++ S+ +L+ G+ + K
Sbjct: 268 IEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELK-CSIPFNLASFNVLIHGYCKAKK 326
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E++ G EPDV+SY I AHC K + ++ +ME CKP+ F
Sbjct: 327 LDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTI 386
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ LG K+++EAL+ + + KK G P++ Y++++ + R+ D ++++M K G
Sbjct: 387 IMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQG 446
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ + E A ++ +M + +P + TY +++MFC ++ +
Sbjct: 447 VTPDVLTYNTLISCACAHSQEETALTLLLKM-EEVSCKPDLKTYHPLLKMFCRKKRMKVL 505
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ D M V Y+ L+ LC KL AC +F EML + P F LK+
Sbjct: 506 KFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEE 565
Query: 301 LRDEGMEE 308
L + M E
Sbjct: 566 LERKSMLE 573
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 142/316 (44%), Gaps = 9/316 (2%)
Query: 14 NRLIDTLCKSRHVE--RAQEVFDKMKKR---RFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
N L+ L K H + +A +F K + R P+ SY +++ G+ KN M E+
Sbjct: 173 NTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPE--SYNSMVDILGKAKNFRLMWELV 230
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
EM + + +I A R+ EA+ FR +E L++ L E
Sbjct: 231 DEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKE 290
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ +A F + K ++N ++ YC + ++++A+++M E+ K G+ P+ +Y
Sbjct: 291 ASVEDAHNVF-RELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISY 349
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ + V +M K G +P V T+ I++ Q++ A++++++MK
Sbjct: 350 TAFIEAHCREKDFRNVDKVLVQMEHK-GCKPNVITFTIIMHALGKAKQINEALKVYEKMK 408
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
G +P YS+LI L +L D + ++M G+ P ++ L EE
Sbjct: 409 KEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEE 468
Query: 309 TAVVLAQKIDKLRKTP 324
TA+ L K++++ P
Sbjct: 469 TALTLLLKMEEVSCKP 484
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G K + F ++ L K++ + A +V++KMKK PD Y+ L+ G+
Sbjct: 372 MEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGR 431
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E+ +M+ G PDV++Y +I+ C+ + + A+ L +ME +CKP +
Sbjct: 432 LTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHP 491
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ +KR+ K EA TY +V C + +++ A EM
Sbjct: 492 LLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKA 551
Query: 181 IGPNTRTYDIVLHHLIKAGRTEE 203
+ P T+ ++ L + EE
Sbjct: 552 MVPKDSTFKMLKEELERKSMLEE 574
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 151/317 (47%), Gaps = 1/317 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+F L + + LI C++R +++A EVFD+M K +P+ +Y+ L+ G + +
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ EM + G EP V +Y + I++ C R D+A+ L R M C PS + +I
Sbjct: 285 EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAII 344
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL ++ A+ + + K G P TYNA++ C R A ++ D M G
Sbjct: 345 SGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTL 404
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
N +TY+ ++ L E+A VF +M K G PTV TY ++ ++ A R
Sbjct: 405 ANAQTYNQIIKGLFGMDDIEKAMVVFNKM-LKDGPSPTVVTYNTLIVENLKRGYLNNATR 463
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
MK P Y LI+ C KLD A +F EML GI P ++ +
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYC 523
Query: 303 DEGMEETAVVLAQKIDK 319
EG + A+ L +++++
Sbjct: 524 KEGKIDVALSLFERMEE 540
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 149/324 (45%), Gaps = 5/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL +N LI+ LC A ++FD M+ + ++Y +++G +
Sbjct: 363 MLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDD 422
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ +M DG P VV+Y +I + + A M+ +NC+P +C
Sbjct: 423 IEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCE 482
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +L A FF + K G P TY A++ YC +I+ A + + M + G
Sbjct: 483 LISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENG 542
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY+ ++ L K R EA +M+ + G +P TY ++ C N ++A
Sbjct: 543 CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ-GLQPNTITYTSLINGLCKNTATNLA 601
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+I+ EM+ + LP H Y++LI LC E K+D A + + + G P +S L
Sbjct: 602 FKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSG 657
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG A L + + + +P
Sbjct: 658 LCREGRSNEASQLVENMKEKGLSP 681
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 153/319 (47%), Gaps = 5/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N LI K ++ A MK+ +PD ++Y L+ G+ +
Sbjct: 433 MLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGK 492
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L S + EM G P+ +Y MI+ +C + D A+ LF ME C S +
Sbjct: 493 LDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNA 552
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL R SEA +F + ++G +P TY +++ C + N A+++ EM K
Sbjct: 553 IISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKN 612
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY +++ L + G+ + A +R++ G EPT+ TY +V C + + A
Sbjct: 613 CLPNAHTYTSLIYGLCQEGKVDAA----ERLTEN-GCEPTIDTYSTLVSGLCREGRSNEA 667
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + MK +G+ P M +Y +L+ + C K+D A + F M G +P ++ L A
Sbjct: 668 SQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICA 727
Query: 301 LRDEGMEETAVVLAQKIDK 319
L E A+ + Q + K
Sbjct: 728 LCGVSRAEEALNIFQSLLK 746
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 1/286 (0%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAV 100
F + S+ LL G+ + S VY ++ G +P ++++ MIN C + EAV
Sbjct: 158 FGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAV 217
Query: 101 ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
+F ++ + P + +LI G ++L +A + F + K G P + TY+ ++
Sbjct: 218 LVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C RI +A M++EM + GI P TY + + L GR ++A ++ + M +K G P+
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKK-GCSPS 336
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V TY ++ ++++A+ ++ +M G++P Y+ LIN LC E + A K F
Sbjct: 337 VQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFD 396
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
M G Q ++ + + L E A+V+ K+ K +P V
Sbjct: 397 WMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTV 442
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 128/297 (43%), Gaps = 32/297 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + +ID CK ++ A +F++M++ I++Y ++ G +
Sbjct: 503 MLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNR 562
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC- 119
+ +M + G +P+ ++Y +IN C + A ++F EME NC P+ H +
Sbjct: 563 FSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTS 622
Query: 120 ------------------------------TLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
TL++GL E R +EA Q K++G P
Sbjct: 623 LIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPS 682
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
Y +++ A+C S++++ A + + M G P+ Y +++ L R EEA ++F+
Sbjct: 683 MEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQ 742
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ +K + + ++V D+ M+ M++R P +H Y L L
Sbjct: 743 SLLKKQWNSDLI-VWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILAREL 798
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 158/329 (48%), Gaps = 11/329 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + DF L+D LCK +V+ A EVF+K +K F D+K YTIL+ GW +
Sbjct: 164 GNKVGIDDFCYLLDVLCKYGYVKVAVEVFNK-RKEEFGVDVKIYTILIYGWCKIGRFEMA 222
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCS----------AKRYDEAVELFREMEATNCKPS 114
++M + G EP+VV+Y +++N C K A ++F EM +P
Sbjct: 223 ERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVFDEMRKRGIEPD 282
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
F +++ + +L Q K+ G P TY +V+ C R+ D +++
Sbjct: 283 VTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGRLEDGENLIE 342
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM + GI P+ TY+ A ++K+M P++ TY I++ +F
Sbjct: 343 EMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFLNL 402
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+ + +W++MK GV P + Y+T+I+ LC + + +AC++F EM++ G P F
Sbjct: 403 DKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKVTF 462
Query: 295 SNLKQALRDEGMEETAVVLAQKIDKLRKT 323
L + L M T L +K+++ KT
Sbjct: 463 EMLYRGLIQSDMLRTWRRLKKKLEEESKT 491
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ ++ F+ ++ ++ E + + +MK+ P + +YT +++
Sbjct: 274 MRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSCGR 333
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
L + EM G P +Y + K A+ L+++M E C PS H +
Sbjct: 334 LEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYN 393
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L+ + + + + K+ G P+ +Y ++ C R ++A + EM +
Sbjct: 394 ILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIER 453
Query: 180 GIGPNTRTYDIVLHHLIKA 198
G P T++++ LI++
Sbjct: 454 GFLPQKVTFEMLYRGLIQS 472
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 156/293 (53%), Gaps = 7/293 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++G + + +++ +CKS A E+ KM++R D Y+I+++G + +
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + ++ EM+ G ++++Y I+I C+A R+D+ +L R+M P+ F
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ E +L EA + + RG P+ TY +++ +C ++ A +M+D M G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN RT++I+++ KA R ++ +F++MS + TV TY +++ FC ++++A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLNVA 457
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDIGI 287
++ EM +R V P + Y L++ LC + + A + F+++ LDIGI
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 160/319 (50%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + +N LI C + + ++ M KR+ +P++ ++++L++ + ++
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+++EM G PD ++Y +I+ C D+A ++ M + C P+ F
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING R+ + L+ F + RG + TYN ++ +C ++N A + EM
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY I+L L G +E+A +F+++ K E + Y I++ C ++VD A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDA 527
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I LC + L +A F++M + G P G ++ L +A
Sbjct: 528 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 587
Query: 301 LRDEGMEETAVVLAQKIDK 319
+G +V L +++ +
Sbjct: 588 HLGDGDATKSVKLIEELKR 606
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 2/322 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + F+ LI+ LC V A E+ D+M + PD+ + L+ G
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ +M + G +P+ V+YG ++N C + + A+EL R+ME N K + +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL L A F + + +G TYN ++G +C + R +D +++ +M K I
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN T+ +++ +K G+ EA + K M + G P TY ++ FC +D A +
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D M ++G P + ++ LIN C +++DD + F++M G+ ++ L Q
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
+ G A L Q++ RK P
Sbjct: 450 ELGKLNVAKELFQEMVS-RKVP 470
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 128/247 (51%), Gaps = 1/247 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + LID CK H+++A ++ D M + DP+I+++ IL+ G+ + +
Sbjct: 363 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++R+M G D V+Y +I C + + A ELF+EM + P+ + L++G
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +AL+ F + +K E + YN ++ C + +++DA+ + + G+ P
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+TY+I++ L K G EA +F++M + G P TY I++R + ++++
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKM-EEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601
Query: 245 DEMKARG 251
+E+K G
Sbjct: 602 EELKRCG 608
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 1/277 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A ++F M R P + ++ L + K + + ++M+ G ++ + IMIN
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C ++ A ++ +P+ F TLINGL E R+SEAL+ + + G +P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ T N +V C S + +A ++D+M + G PN TY VL+ + K+G+T A +
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
++M + V Y I++ C + +D A +++EM+ +G+ + Y+ LI C+
Sbjct: 252 RKMEERNIKLDAVK-YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ DD K ++M+ I P FS L + EG
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG 347
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 1/201 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N LI C+ + A+E+F +M R+ P+I +Y ILL+G
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ +++ E D+ Y I+I+ C+A + D+A +LF + KP + +I G
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + LSEA F + ++ G P+ TYN ++ A+ + ++++E+++CG +
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Query: 185 TRTYDIVLHHLIKAGRTEEAY 205
T +V+ ++ GR ++++
Sbjct: 613 ASTIKMVI-DMLSDGRLKKSF 632
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK------------------------- 129
+ D+A++LFR+M + P+ F L + + K
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 130 ----------RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+L A G+ K G+EP T++ ++ C R+++A ++D M +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ T + +++ L +G+ EA + +M + G +P TY V+ + C + Q +
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
AM + +M+ R + YS +I+ LC LD+A F EM
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 154/296 (52%), Gaps = 1/296 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN +I +C+ V++A E+ ++M + PD ++ I+++G + + +EV R +
Sbjct: 251 SFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRL 310
Query: 72 KDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ DG P+VV++ +I+ +C A + ++A+ ++ +M A+ P+ + LING G
Sbjct: 311 QRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGD 370
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L A++ + Q + P+ T+++++ YC +++DA R+ +M + I PN T+ I
Sbjct: 371 LGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSI 430
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++H L K R++EA + ++ +P P Y V+ + C +VD A I M+ +
Sbjct: 431 IIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK 490
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
G P + Y+ LI C + ++ +A +F EM++ G P + L GM
Sbjct: 491 GCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGM 546
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 129/256 (50%), Gaps = 3/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQK 59
M++FG + N ++D LC++ V R EV ++++ P++ ++T ++ G+ +
Sbjct: 275 MNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAG 334
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L VY +M G P+ V+Y ++IN + AVE++++M C P F
Sbjct: 335 KLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFS 394
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-K 178
+LI+G +L +AL+ + + +P T++ ++ + C R ++A R+++E+ +
Sbjct: 395 SLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLR 454
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P Y+ V+ L K G+ +EA + K M K G P TY I++ +C +++
Sbjct: 455 PDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEK-GCRPDKYTYTILIIGYCMKSRIS 513
Query: 239 MAMRIWDEMKARGVLP 254
A+ + EM G P
Sbjct: 514 EAIMFFHEMVEAGCSP 529
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 128/279 (45%), Gaps = 5/279 (1%)
Query: 50 ILLEGWGQQKNLLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA 108
++L G+Q + L +++ +M G+ PD ++++ A D + L +
Sbjct: 150 VVLCRSGRQADAL---QLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 206
Query: 109 TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRIN 167
C+ + + L++ L R+ + + F + + R + P+ ++N V+ C ++
Sbjct: 207 FGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQ 266
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
A +++ M + G P+T T++I++ L + + V +R+ R P V T+ V
Sbjct: 267 KALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSV 326
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +C +++ AM ++++M A G++P Y+ LIN L A + +Q+M +
Sbjct: 327 ISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRC 386
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
P FS+L G + A+ + + + R P V
Sbjct: 387 PPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNV 425
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 1/213 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ +N LI+ K + A EV+ +M + R PD+ +++ L++G+ +
Sbjct: 346 MVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQ 405
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFC 119
L ++ +M +P+V ++ I+I++ C R DEA+ L E+ + P I+
Sbjct: 406 LDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYN 465
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L ++ EA +++G P+ TY ++ YC RI++A EM +
Sbjct: 466 PVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEA 525
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
G P++ T + + L+KAG E V + S
Sbjct: 526 GCSPDSITVNCFISCLLKAGMPNEVDHVMRLAS 558
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
++I LC+S A ++FD+M + PD + + L+ L + + + +
Sbjct: 147 QIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 206
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + +Y ++++ R + V LF R ++ P F +I G+ ++
Sbjct: 207 FGCRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQ 266
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-PNTRTYDIV 191
+AL+ + + G P+ T+N +V C + ++ + ++ +++ G+ PN T+ V
Sbjct: 267 KALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSV 326
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ KAG+ E+A +V+ M G P TY +++ + + A+ ++ +M
Sbjct: 327 ISGYCKAGKLEDAMAVYNDMVAS-GIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR 385
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + +S+LI+ C +LDDA + + +M I+P FS + +L + + A+
Sbjct: 386 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 445
Query: 312 VLAQKID 318
L +++
Sbjct: 446 RLLNELN 452
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 151/303 (49%), Gaps = 3/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQ 58
M + G + +N L+ LC + A E+ M D PD+ SYT ++ G+ ++
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+L Y EM D G P+VV+Y +I A C A+ D+A+E+ M P+ +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++++G S + EA+ F + G EP+ TYN+++ C + R +A +M D M K
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P TY +L G E + + M R G P + I++ + +VD
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILICAYAKQGKVD 391
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM ++ +M+ +G+ P Y T+I LC +++DA +YF++M+D + P ++++L
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 299 QAL 301
+L
Sbjct: 452 HSL 454
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 152/301 (50%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ +N L+D LCK+ A+++FD M KR P+I +Y LL+G+ +
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ M+ + M +G P+ + I+I A+ + D+A+ +F +M P + T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L R+ +A+++F Q P YN+++ + C + + A ++ EM G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I +T ++ ++ K GR E+ +F M R G +P + TY ++ +C ++D A
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR-IGVKPNIITYSTLIDGYCLAGKMDEA 533
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ M + G+ P Y+TLIN C +++DA F+EM G+ P ++ + Q
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Query: 301 L 301
L
Sbjct: 594 L 594
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 13/311 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + GL + + +I LCKS VE A F++M R P Y L+
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W + K L+ EM D G D + + +I++HC R E+ +LF M KP+
Sbjct: 460 WDKAKELI------LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPN 513
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ TLI+G ++ EA + G +P+ TYN ++ YC R+ DA +
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM G+ P+ TY+I+L L + RT A ++ ++ + GT+ +STY I++ C N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-ESGTQLELSTYNIILHGLCKN 632
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
D A+R++ + + ++ +I +L + D+A F + G+ P + +
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692
Query: 295 SNLKQALRDEG 305
S + + L ++G
Sbjct: 693 SLMAENLIEQG 703
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID+ CK V ++++FD M + P+I +Y+ L++G+ + ++ M
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD V+Y +IN +C R ++A+ LFREME++ P + ++ GL +R +
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + + G + E TYN ++ C + ++A RM + + TRT++I++
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F +S G P V TY ++ ++ ++ M+ G
Sbjct: 662 GALLKVGRNDEAKDLFAALSAN-GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYF 279
M ++++ L + A Y
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYL 747
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 6/284 (2%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD--DGFEPDVVSYG 84
E A+ VFD++ +R I L + +++ R + D P++ +YG
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF-FGQSKK 143
I+I + C A R D + + F L+ GL ++KR S+A+ + +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--IGPNTRTYDIVLHHLIKAGRT 201
G P +YN ++ C R +A ++ M G P+ +Y V++ K G
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
++AY + M + G P V TY ++ C +D AM + M GV+P Y++
Sbjct: 216 DKAYGTYHEMLDR-GILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+++ C + +A + ++M G+ P +++L L G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 62/148 (41%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + EL +N ++ LCK+ + A +F + + +++ I++ +
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + +G PDV +Y +M +E +LF ME C + + +++
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
L ++ A + ++ F EA T
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSLEAST 761
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 158/308 (51%), Gaps = 2/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K+G+ + N L+D L K VE A VF ++K ++ S+ +L+ G+ + K
Sbjct: 291 IEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELK-CSIPFNLASFNVLIHGYCKAKK 349
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E++ G EPDV+SY I AHC K + ++ +ME CKP+ F
Sbjct: 350 LDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTI 409
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ LG K+++EAL+ + + KK G P++ Y++++ + R+ D ++++M K G
Sbjct: 410 IMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQG 469
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ + E A ++ +M + +P + TY +++MFC ++ +
Sbjct: 470 VTPDVLTYNTLISCACAHSQEETALTLLLKM-EEVSCKPDLKTYHPLLKMFCRKKRMKVL 528
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ D M V Y+ L+ LC KL AC +F EML + P F LK+
Sbjct: 529 KFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEE 588
Query: 301 LRDEGMEE 308
L + M E
Sbjct: 589 LERKSMLE 596
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 142/316 (44%), Gaps = 9/316 (2%)
Query: 14 NRLIDTLCKSRHVE--RAQEVFDKMKKR---RFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
N L+ L K H + +A +F K + R P+ SY +++ G+ KN M E+
Sbjct: 196 NTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPE--SYNSMVDILGKAKNFRLMWELV 253
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
EM + + +I A R+ EA+ FR +E L++ L E
Sbjct: 254 DEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKE 313
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ +A F + K ++N ++ YC + ++++A+++M E+ K G+ P+ +Y
Sbjct: 314 ASVEDAHNVF-RELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISY 372
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ + V +M K G +P V T+ I++ Q++ A++++++MK
Sbjct: 373 TAFIEAHCREKDFRNVDKVLVQMEHK-GCKPNVITFTIIMHALGKAKQINEALKVYEKMK 431
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
G +P YS+LI L +L D + ++M G+ P ++ L EE
Sbjct: 432 KEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEE 491
Query: 309 TAVVLAQKIDKLRKTP 324
TA+ L K++++ P
Sbjct: 492 TALTLLLKMEEVSCKP 507
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G K + F ++ L K++ + A +V++KMKK PD Y+ L+ G+
Sbjct: 395 MEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGR 454
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E+ +M+ G PDV++Y +I+ C+ + + A+ L +ME +CKP +
Sbjct: 455 LTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHP 514
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ +KR+ K EA TY +V C + +++ A EM
Sbjct: 515 LLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKA 574
Query: 181 IGPNTRTYDIVLHHLIKAGRTEE 203
+ P T+ ++ L + EE
Sbjct: 575 MVPKDSTFKMLKEELERKSMLEE 597
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 151/303 (49%), Gaps = 3/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQ 58
M + G + +N L+ LC + A E+ M D PD+ SYT ++ G+ ++
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+L Y EM D G P+VV+Y +I A C A+ D+A+E+ M P+ +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++++G S + EA+ F + G EP+ TYN+++ C + R +A +M D M K
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P TY +L G E + + M R G P + I++ + +VD
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILICAYAKQGKVD 391
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM ++ +M+ +G+ P Y T+I LC +++DA +YF++M+D + P ++++L
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 299 QAL 301
+L
Sbjct: 452 HSL 454
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 152/301 (50%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ +N L+D LCK+ A+++FD M KR P+I +Y LL+G+ +
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ M+ + M +G P+ + I+I A+ + D+A+ +F +M P + T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L R+ +A+++F Q P YN+++ + C + + A ++ EM G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I +T ++ ++ K GR E+ +F M R G +P + TY ++ +C ++D A
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEA 533
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ M + G+ P Y+TLIN C +++DA F+EM G+ P ++ + Q
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Query: 301 L 301
L
Sbjct: 594 L 594
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 13/311 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + GL + + +I LCKS VE A F++M R P Y L+
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W + K L+ EM D G D + + +I++HC R E+ +LF M KP
Sbjct: 460 WDKAKELI------LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ TLI+G ++ EA + G +P+ TYN ++ YC R+ DA +
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM G+ P+ TY+I+L L + RT A ++ ++ + GT+ +STY I++ C N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-ESGTQLELSTYNIILHGLCKN 632
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
D A+R++ + + ++ +I +L + D+A F + G+ P + +
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692
Query: 295 SNLKQALRDEG 305
S + + L ++G
Sbjct: 693 SLMAENLIEQG 703
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID+ CK V ++++FD M + PDI +Y+ L++G+ + ++ M
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD V+Y +IN +C R ++A+ LFREME++ P + ++ GL +R +
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + + G + E TYN ++ C + ++A RM + + TRT++I++
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F +S G P V TY ++ ++ ++ M+ G
Sbjct: 662 GALLKVGRNDEAKDLFAALSAN-GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYF 279
M ++++ L + A Y
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYL 747
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI +LC ++A+E+ +M R D + +++ ++ ++ +++ M
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+++Y +I+ +C A + DEA +L M + KP + TLING R+
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL F + + G P+ TYN ++ + R A + + + G TY+I+L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K T+EA +F+ + + T+ I++ + D A ++ + A G+
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P + YS + +L + L++ F M + G ++ +++ + L G
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 6/284 (2%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD--DGFEPDVVSYG 84
E A+ VFD++ +R I L + +++ R + D P++ +YG
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF-FGQSKK 143
I++ + C A R D + F ++ GL ++KR S+A+ + +
Sbjct: 96 ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--IGPNTRTYDIVLHHLIKAGRT 201
G P +YN ++ C R +A ++ M G P+ +Y V++ K G
Sbjct: 156 LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
++AY + M + G P V TY ++ C +D AM + M GV+P Y++
Sbjct: 216 DKAYGTYHEMLDR-GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+++ C + +A + ++M G+ P +++L L G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 62/148 (41%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + EL +N ++ LCK+ + A +F + + +++ I++ +
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + +G PDV +Y +M +E +LF ME C + + +++
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
L ++ A + ++ F EA T
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSLEAST 761
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 159/313 (50%), Gaps = 2/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL+ ++ +I LCK R A VF+ M ++ ++ YT L++ + + +
Sbjct: 316 MEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGS 375
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ MK++GFEPD V+Y +++N C + R D+ +ELF + + +
Sbjct: 376 MEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 435
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GLG R+ +A F + ++G ++ YNA++ A +I+ A + M + G
Sbjct: 436 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEG 495
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
T+ I++ L K + EEA + +M K G PTV+++ + C +V A
Sbjct: 496 CDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDK-GITPTVASFRALAIGLCLCGKVARA 554
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+I D++ G++P + +IN+LC ++ +ACK ++D G PG++ + L A
Sbjct: 555 CKILDDLAPMGIIPETA-FEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINA 613
Query: 301 LRDEGMEETAVVL 313
LR G + + L
Sbjct: 614 LRKAGNSDLVIKL 626
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 149/306 (48%), Gaps = 1/306 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N LI + VE V+ +MK+ DP + +Y L+ G + S +V+ M
Sbjct: 189 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 248
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
PD V+Y IMI +C A + +A+E FR+ME N KP + TLI SE+
Sbjct: 249 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 308
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
L + + ++RG E +Y+ V+G C + +AY + + M + G N Y ++
Sbjct: 309 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 368
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
K G EEA +F+RM + G EP TY ++V C + ++D M ++D + +GV
Sbjct: 369 SYSKNGSMEEAMRLFERM-KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVA 427
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
Y++LI+ L +++DA F+EM + G ++ + AL G + A+ L
Sbjct: 428 INAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALAL 487
Query: 314 AQKIDK 319
++++
Sbjct: 488 FGRMEE 493
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 149/295 (50%), Gaps = 4/295 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD +N +I CK+ +++A E F M+ + PD +Y L++ +++ +
Sbjct: 252 VPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLS 311
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y EM++ G E SY ++I C ++ EA +F M C+ + I+ LI+
Sbjct: 312 LYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYS 371
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ EA++ F + K GFEP+A TY+ +V C S R++D + D R G+ N
Sbjct: 372 KNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAM 431
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y ++ L KAGR E+A ++F+ MS K G Y ++ + ++D A+ ++
Sbjct: 432 FYASLIDGLGKAGRIEDAENLFEEMSEK-GCARDSYCYNAIIDALAKHGKIDQALALFGR 490
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M+ G ++ ++ LI+ L E K ++A K++ +M+D GI P F L L
Sbjct: 491 MEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 545
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 130/293 (44%), Gaps = 2/293 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + + + LID+ K+ +E A +F++MK F+PD +Y++L+ G +
Sbjct: 351 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGR 410
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ ++ G + + Y +I+ A R ++A LF EM C + +
Sbjct: 411 LDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNA 470
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ +AL FG+ ++ G + T+ ++ + +A + D+M G
Sbjct: 471 IIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKG 530
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P ++ + L G+ A + ++ G P + +E ++ C ++ A
Sbjct: 531 ITPTVASFRALAIGLCLCGKVARACKILDDLA-PMGIIPE-TAFEDMINTLCKAQRIKEA 588
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
++ D + RG + + LIN+L D K + IG G +
Sbjct: 589 CKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSI 641
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 134/309 (43%), Gaps = 36/309 (11%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
K++++ I+ + L+E +L+ + V+ E+KD G + +I + +
Sbjct: 142 KQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLV 201
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+E + ++R M+ PS + + L+NGL + + A + F P+ TYN +
Sbjct: 202 EELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIM 261
Query: 157 VGAYCWSMRINDA---YRMMD--------------------------------EMRKCGI 181
+ YC + ++ A +R M+ EM + G+
Sbjct: 262 IKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGL 321
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
+Y +V+ L K + EAY+VF+ M++K G V+ Y ++ + N ++ AM
Sbjct: 322 EIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQK-GCRANVAIYTALIDSYSKNGSMEEAM 380
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R+++ MK G P YS L+N LC +LDD + F + G+ +++L L
Sbjct: 381 RLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGL 440
Query: 302 RDEGMEETA 310
G E A
Sbjct: 441 GKAGRIEDA 449
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 151/303 (49%), Gaps = 3/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQ 58
M + G + +N L+ LC + A E+ M D PD+ SYT ++ G+ ++
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+L Y EM D G P+VV+Y +I A C A+ D+A+E+ M P+ +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++++G S + EA+ F + G EP+ TYN+++ C + R +A +M D M K
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P TY +L G E + + M R G P + I++ + +VD
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILICAYAKQGKVD 391
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM ++ +M+ +G+ P Y T+I LC +++DA +YF++M+D + P ++++L
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 299 QAL 301
+L
Sbjct: 452 HSL 454
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 152/301 (50%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ +N L+D LCK+ A+++FD M KR P+I +Y LL+G+ +
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ M+ + M +G P+ + I+I A+ + D+A+ +F +M P + T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L R+ +A+++F Q P YN+++ + C + + A ++ EM G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I +T ++ ++ K GR E+ +F M R G +P + TY ++ +C ++D A
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEA 533
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ M + G+ P Y+TLIN C +++DA F+EM G+ P ++ + Q
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Query: 301 L 301
L
Sbjct: 594 L 594
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 13/311 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + GL + + +I LCKS VE A F++M R P Y L+
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W + K E+ EM D G D + + +I++HC R E+ +LF M KP
Sbjct: 460 WDKAK------ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ TLI+G ++ EA + G +P+ TYN ++ YC R+ DA +
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM G+ P+ TY+I+L L + RT A ++ ++ + GT+ +STY I++ C N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-ESGTQLELSTYNIILHGLCKN 632
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
D A+R++ + + ++ +I +L + D+A F + G+ P + +
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692
Query: 295 SNLKQALRDEG 305
S + + L ++G
Sbjct: 693 SLMAENLIEQG 703
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID+ CK V ++++FD M + PDI +Y+ L++G+ + ++ M
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD V+Y +IN +C R ++A+ LFREME++ P + ++ GL +R +
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + + G + E TYN ++ C + ++A RM + + TRT++I++
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F +S G P V TY ++ ++ ++ M+ G
Sbjct: 662 GALLKVGRNDEAKDLFAALSAN-GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYF 279
M ++++ L + A Y
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYL 747
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI +LC ++A+E+ +M R D + +++ ++ ++ +++ M
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+++Y +I+ +C A + DEA +L M + KP + TLING R+
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL F + + G P+ TYN ++ + R A + + + G TY+I+L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K T+EA +F+ + + T+ I++ + D A ++ + A G+
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P + YS + +L + L++ F M + G ++ +++ + L G
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 6/284 (2%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD--DGFEPDVVSYG 84
E A+ VFD++ +R I L + +++ R + D P++ +YG
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF-FGQSKK 143
I+I + C A R D + + F L+ GL ++KR S+A+ + +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--IGPNTRTYDIVLHHLIKAGRT 201
G P +YN ++ C R +A ++ M G P+ +Y V++ K G
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
++AY + M + G P V TY ++ C +D AM + M GV+P Y++
Sbjct: 216 DKAYGTYHEMLDR-GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+++ C + +A + ++M G+ P +++L L G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 62/148 (41%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + EL +N ++ LCK+ + A +F + + +++ I++ +
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + +G PDV +Y +M +E +LF ME C + + +++
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
L ++ A + ++ F EA T
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSLEAST 761
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 157/347 (45%), Gaps = 39/347 (11%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++ TL K++ V+ A+EVF +M+K F PD +Y +++G + + +V M
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P V+YGI++N+ C A + A ELFR M A+ +P+ I+ +LI+G R+ EA
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + + G+ P+ T+ ++ C S A + +EM + G PN TY ++ L
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K GR A+ + K M G P TY ++ FC ++D A ++ DE+ P
Sbjct: 411 SKIGRVANAFRIMKGMIAH-GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469
Query: 256 MHMYSTLIN------------------------------------SLCHEDKLDDACKYF 279
+ +YS+L+N LC +LD+AC+ F
Sbjct: 470 LQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIF 529
Query: 280 QEMLDIGIRPPGQLFSNLKQAL--RDEGMEETAVVLAQKIDKLRKTP 324
Q M+ G +P ++ L L E E A L ++K+ P
Sbjct: 530 QRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLP 576
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 145/303 (47%), Gaps = 2/303 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRF-DPDIKSYTILLEGWGQQKNLLSMN 65
K +L F L+D LCK+ E+A EVF +M F PD +T ++ + K +
Sbjct: 186 KPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAR 245
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
EV+ +M+ GF PD ++Y MI+ A EA+++ M A C P+ + L+N L
Sbjct: 246 EVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
L A + F GF P + Y +++ + S R+ +A + DEM + G P+
Sbjct: 306 CKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDV 365
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T+ +++ L K+G E+A F+ M R G +P V TY +++ +V A RI
Sbjct: 366 ITHTVMIDGLCKSGNFEQAAKSFEEMMRG-GCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M A G P Y L++ C +LD+A + E+ P QL+S+L L D G
Sbjct: 425 GMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGG 484
Query: 306 MEE 308
E
Sbjct: 485 SVE 487
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 153/348 (43%), Gaps = 37/348 (10%)
Query: 1 MDKFGLKQELPDFNRLID-----------------------------------TLCKSRH 25
M+K G + +N +ID +LCK+
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+ERA+E+F M F P+ YT L+ G+ + + ++ EM + G+ PDV+++ +
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
MI+ C + +++A + F EM CKP+ + T+I GL R++ A + G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P++ TY ++ +C R+++A +++DE+ KC PN + Y +++ L G E+
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTL 490
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
S+ ++ C ++D A RI+ M + G P Y+ LIN
Sbjct: 491 DDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILING 550
Query: 266 LC--HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
LC E++++ A ++ +G P ++ L L G + AV
Sbjct: 551 LCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAV 598
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 147/305 (48%), Gaps = 2/305 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
++ G + ++ +N L++ L ++ + + ++M K P+ S+ IL+ + + +
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCT 120
+ MK +PD+ ++ I+++ C A ++A E+F EM A P +
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ L KR+ EA + FGQ +K GF P+A YN ++ + +A +++D M
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY I+++ L KAG E A +F+ M+ G P Y ++ F + ++ A
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMA-ASGFRPNSVIYTSLIHGFAKSGRMKEA 349
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++DEM G P + ++ +I+ LC + A K F+EM+ G +P ++ + Q
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQG 409
Query: 301 LRDEG 305
L G
Sbjct: 410 LSKIG 414
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 10/293 (3%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR------ 69
+I LCK+ ++ A +F +M PD +Y IL+ G + + N V R
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE----NRVERAFALLH 567
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+++ G+ PD V+Y + C D AV++ E + + L GL +
Sbjct: 568 DLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ A+ F + ++G P+A Y ++ ++ DA + DEM G P TY
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYT 687
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ L AG +EA+ F+ M + +V Y+ ++ FC +VD A++++++M +
Sbjct: 688 ALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
RG +P ++L + L K + A + QEM G P F+ + LR
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLR 800
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K G + + L LCK V+RA ++ ++ R ++ D+ +YT L G Q
Sbjct: 569 LEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM G PD +Y +IN K+ ++A + F EM KP+ +
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTA 688
Query: 121 LINGLGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L+ L + EA F RG Y+A++ +C +++++ A ++ ++M
Sbjct: 689 LVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISR 748
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
G P T + L+++G+TE+A + + M+ G+ P +T+ ++
Sbjct: 749 GNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA-AGGSPPHAATFTAIL 796
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 151/303 (49%), Gaps = 3/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQ 58
M + G + +N L+ LC + A E+ M D PD+ SYT ++ G+ ++
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+L Y EM D G P+VV+Y +I A C A+ D+A+E+ M P+ +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++++G S + EA+ F + G EP+ TYN+++ C + R +A +M D M K
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P TY +L G E + + M R G P + I++ + +VD
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILICAYAKQGKVD 391
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM ++ +M+ +G+ P Y T+I LC +++DA +YF++M+D + P ++++L
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 299 QAL 301
+L
Sbjct: 452 HSL 454
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 152/301 (50%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ +N L+D LCK+ A+++FD M KR P+I +Y LL+G+ +
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ M+ + M +G P+ + I+I A+ + D+A+ +F +M P + T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L R+ +A+++F Q P YN+++ + C + + A ++ EM G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I +T ++ ++ K GR E+ +F M R G +P + TY ++ +C ++D A
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEA 533
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ M + G+ P Y+TLIN C +++DA F+EM G+ P ++ + Q
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Query: 301 L 301
L
Sbjct: 594 L 594
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 13/311 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + GL + + +I LCKS VE A F++M R P Y L+
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W + K L+ EM D G D + + +I++HC R E+ +LF M KP
Sbjct: 460 WDKAKELI------LEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ TLI+G ++ EA + G +P+ TYN ++ YC R+ DA +
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM G+ P+ TY+I+L L + RT A ++ ++ + GT+ +STY I++ C N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-ESGTQLELSTYNIILHGLCKN 632
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
D A+R++ + + ++ +I +L + D+A F + G+ P + +
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692
Query: 295 SNLKQALRDEG 305
S + + L ++G
Sbjct: 693 SLMAENLIEQG 703
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID+ CK V ++++FD M + PDI +Y+ L++G+ + ++ M
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD V+Y +IN +C R ++A+ LFREME++ P + ++ GL +R +
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + + G + E TYN ++ C + ++A RM + + TRT++I++
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F +S G P V TY ++ ++ ++ M+ G
Sbjct: 662 GALLKVGRNDEAKDLFAALSAN-GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYF 279
M ++++ L + A Y
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYL 747
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI +LC ++A+E+ +M R D + +++ ++ ++ +++ M
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+++Y +I+ +C A + DEA +L M + KP + TLING R+
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL F + + G P+ TYN ++ + R A + + + G TY+I+L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K T+EA +F+ + + T+ I++ + D A ++ + A G+
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P + YS + +L + L++ F M + G ++ +++ + L G
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 6/284 (2%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD--DGFEPDVVSYG 84
E A+ VFD++ +R I L + +++ R + D P++ +YG
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF-FGQSKK 143
I+I + C A R D + + F L+ GL ++KR S+A+ + +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--IGPNTRTYDIVLHHLIKAGRT 201
G P +YN ++ C R +A ++ M G P+ +Y V++ K G
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
++AY + M + G P V TY ++ C +D AM + M GV+P Y++
Sbjct: 216 DKAYGTYHEMLDR-GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+++ C + +A + ++M G+ P +++L L G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 62/148 (41%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + EL +N ++ LCK+ + A +F + + +++ I++ +
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + +G PDV +Y +M +E +LF ME C + + +++
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
L ++ A + ++ F EA T
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSLEAST 761
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 151/303 (49%), Gaps = 3/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQ 58
M + G + +N L+ LC + A E+ M D PD+ SYT ++ G+ ++
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+L Y EM D G P+VV+Y +I A C A+ D+A+E+ M P+ +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++++G S + EA+ F + G EP+ TYN+++ C + R +A +M D M K
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P TY +L G E + + M R G P + I++ + +VD
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILICAYAKQGKVD 391
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM ++ +M+ +G+ P Y T+I LC +++DA +YF++M+D + P ++++L
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 299 QAL 301
+L
Sbjct: 452 HSL 454
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 152/301 (50%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ +N L+D LCK+ A+++FD M KR P+I +Y LL+G+ +
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ M+ + M +G P+ + I+I A+ + D+A+ +F +M P + T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L R+ +A+++F Q P YN+++ + C + + A ++ EM G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I +T ++ ++ K GR E+ +F M R G +P + TY ++ +C ++D A
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEA 533
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ M + G+ P Y+TLIN C +++DA F+EM G+ P ++ + Q
Sbjct: 534 TKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQG 593
Query: 301 L 301
L
Sbjct: 594 L 594
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 13/311 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + GL + + +I LCKS VE A F++M R P Y L+
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W + K E+ EM D G D + + +I++HC R E+ +LF M KP
Sbjct: 460 WDKAK------ELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 513
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ TLI+G ++ EA + G +P+ TYN ++ YC R+ DA +
Sbjct: 514 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFR 573
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM G+ P+ TY+I+L L + RT A ++ ++ + GT+ +STY I++ C N
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT-ESGTQLELSTYNIILHGLCKN 632
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
D A+R++ + + ++ +I +L + D+A F + G+ P + +
Sbjct: 633 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTY 692
Query: 295 SNLKQALRDEG 305
S + + L ++G
Sbjct: 693 SLMAENLIEQG 703
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID+ CK V ++++FD M + PDI +Y+ L++G+ + ++ M
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD V+Y +IN +C R ++A+ LFREME++ P + ++ GL +R +
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + + G + E TYN ++ C + ++A RM + + TRT++I++
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F +S G P V TY ++ ++ ++ M+ G
Sbjct: 662 GALLKVGRNDEAKDLFAALSAN-GLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGC 720
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYF 279
M ++++ L + A Y
Sbjct: 721 TANSRMLNSIVRKLLQRGDITRAGTYL 747
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI +LC ++A+E+ +M R D + +++ ++ ++ +++ M
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+++Y +I+ +C A + DEA +L M + KP + TLING R+
Sbjct: 507 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRME 566
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL F + + G P+ TYN ++ + R A + + + G TY+I+L
Sbjct: 567 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIIL 626
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K T+EA +F+ + + T+ I++ + D A ++ + A G+
Sbjct: 627 HGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGL 685
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P + YS + +L + L++ F M + G ++ +++ + L G
Sbjct: 686 VPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRG 738
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 122/284 (42%), Gaps = 6/284 (2%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD--DGFEPDVVSYG 84
E A+ VFD++ +R I L + +++ R + D P++ +YG
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF-FGQSKK 143
I+I + C A R D + + F L+ GL ++KR S+A+ + +
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--IGPNTRTYDIVLHHLIKAGRT 201
G P +YN ++ C R +A ++ M G P+ +Y V++ K G
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
++AY + M + G P V TY ++ C +D AM + M GV+P Y++
Sbjct: 216 DKAYGTYHEMLDR-GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+++ C + +A + ++M G+ P +++L L G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 62/148 (41%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + EL +N ++ LCK+ + A +F + + +++ I++ +
Sbjct: 614 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 673
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + +G PDV +Y +M +E +LF ME C + + +++
Sbjct: 674 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 733
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
L ++ A + ++ F EA T
Sbjct: 734 LLQRGDITRAGTYLFMIDEKHFSLEAST 761
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 158/304 (51%), Gaps = 2/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K ++ +N LI LC A + M +R+ +P++ ++ L++ + ++
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK 341
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ +++ EM +P++V+Y +IN C R DEA ++F M + +C P + T
Sbjct: 342 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 401
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + +RG TYN ++ + + A ++ +M G
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L K G+ E+A VF+ + +K EP + TY I++ C +V+
Sbjct: 462 VPPDIITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPNIYTYNIMIEGMCKAGKVEDG 520
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + +Y+T+I+ C + ++A F+EM + G P ++ L +A
Sbjct: 521 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 580
Query: 301 -LRD 303
LRD
Sbjct: 581 RLRD 584
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 162/319 (50%), Gaps = 13/319 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M+K ++ + +N +ID LCK +H++ A ++F+KM+ + PD+ +Y L+
Sbjct: 247 MEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGR 306
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W LLS +M + P+VV++ +I+A + EA +LF EM + P+
Sbjct: 307 WSDASRLLS------DMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +LING RL EA Q F + P+ TYN ++ +C + R+ + +
Sbjct: 361 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR 420
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM + G+ NT TY+ ++ L +AG + A +FK+M G P + TY I++ C
Sbjct: 421 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV-SDGVPPDIITYSILLDGLCKY 479
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+++ A+ +++ ++ + P ++ Y+ +I +C K++D F + G++P ++
Sbjct: 480 GKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 539
Query: 295 SNLKQALRDEGMEETAVVL 313
+ + +G++E A L
Sbjct: 540 TTMISGFCRKGLKEEADAL 558
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID K + A+++FD+M +R DP+I +Y L+ G+ L +++ M
Sbjct: 329 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 388
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDVV+Y +I C AKR +E +ELFREM + + TLI GL
Sbjct: 389 SKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 448
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G P+ TY+ ++ C ++ A + + ++K + PN TY+I++
Sbjct: 449 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMI 508
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAG+ E+ + +F +S K G +P V Y ++ FC + A ++ EMK G
Sbjct: 509 EGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 567
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
LP Y+TLI + + + + +EM G S + L D +E++
Sbjct: 568 LPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 624
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + FN LI L A + D+M R PD+ +Y ++ G ++ +
Sbjct: 177 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++M+ E +VV Y +I+ C K D+A +LF +ME KP + +
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + R S+A + +R P T+N+++ A+ ++ +A ++ DEM +
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ +++ R +EA +F M K P V TY +++ FC +V+
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD-CLPDVVTYNTLIKGFCKAKRVEEG 415
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M ++ EM RG++ Y+TLI L D A K F++M+ G+ P +S L
Sbjct: 416 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 475
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G E A+V+ + + K + P
Sbjct: 476 LCKYGKLEKALVVFEYLQKSKMEP 499
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 164/354 (46%), Gaps = 40/354 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ L++ C+ + A V KM K ++PDI + + LL G+ K
Sbjct: 107 MQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 166
Query: 61 LLSMNEVYREMKDDGFEPDVV-----------------------------------SYGI 85
+ + +M + G++PD V +YG
Sbjct: 167 ISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 226
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++N C D A+ L ++ME + + I+ T+I+GL K + +A F + + +G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P+ TYN+++ C R +DA R++ +M + I PN T++ ++ K G+ EA
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F M ++ +P + TY ++ FC + ++D A +I+ M ++ LP + Y+TLI
Sbjct: 347 KLFDEMIQRS-IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKG 405
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
C ++++ + F+EM G+ ++ L Q L G + +AQKI K
Sbjct: 406 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD----MAQKIFK 455
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 141/286 (49%), Gaps = 1/286 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+F++L+ + K + + ++M+ + +Y+ILL + ++ L V +M
Sbjct: 83 EFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKM 142
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G+EPD+V+ ++N +C KR EAV L +M KP F TLI+GL +
Sbjct: 143 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKA 202
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
SEA+ + RG +P+ TY VV C I+ A ++ +M K I N Y+ +
Sbjct: 203 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTI 262
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K ++A+ +F +M K G +P V TY ++ C + A R+ +M R
Sbjct: 263 IDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ P + +++LI++ E KL +A K F EM+ I P +++L
Sbjct: 322 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 367
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 136/280 (48%), Gaps = 1/280 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A +F +M K R P I ++ LL + + + +M++ G + +Y I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++N C + A+ + +M +P +L+NG KR+SEA+ Q + G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++P+ T+N ++ + ++A ++D M G P+ TY V++ L K G + A
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
S+ K+M K E V Y ++ C +D A ++++M+ +G+ P + Y++LI+
Sbjct: 242 SLLKKM-EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC+ + DA + +M++ I P F++L A EG
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEG 340
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 115/249 (46%), Gaps = 36/249 (14%)
Query: 92 SAKRYDEAVELFREMEATNCKPS--------------------------------PH--- 116
S + D+AV LF EM + PS PH
Sbjct: 58 SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ L+N +L AL G+ K G+EP+ T ++++ YC RI++A ++D+M
Sbjct: 118 TYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 177
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G P+T T++ ++H L + EA ++ RM + G +P + TY VV C
Sbjct: 178 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGD 236
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+D+A+ + +M+ + + +Y+T+I+ LC +DDA F +M GI+P +++
Sbjct: 237 IDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNS 296
Query: 297 LKQALRDEG 305
L L + G
Sbjct: 297 LISCLCNYG 305
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 79/153 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ L+D LCK +E+A VF+ ++K + +P+I +Y I++EG + +
Sbjct: 461 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDG 520
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + G +P+V+ Y MI+ C +EA LFREM+ P + TLI
Sbjct: 521 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 580
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ + + + + + GF +A T + V+
Sbjct: 581 RLRDGDKAASAELIKEMRSCGFVGDASTISMVI 613
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL SE +L +A+ FG+ K P ++ ++ A + + + ++M+ GI
Sbjct: 55 NGL-SELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
N TY I+L+ + + A +V +M K G EP + T ++ +C+ ++ A+
Sbjct: 114 HNHYTYSILLNCFCRRSQLPLALAVLGKM-MKLGYEPDIVTLSSLLNGYCHGKRISEAVA 172
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D+M G P ++TLI+ L +K +A M+ G +P + + L
Sbjct: 173 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 232
Query: 303 DEGMEETAVVLAQKIDK 319
G + A+ L +K++K
Sbjct: 233 KRGDIDLALSLLKKMEK 249
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 165/361 (45%), Gaps = 43/361 (11%)
Query: 2 DKFGLKQE---------LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
D FGL E + DF R++ + K + +F KM+ D+ S+TIL+
Sbjct: 598 DAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILI 657
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+ + + +M GF+P +V+ G ++N C R+ EAV L M +
Sbjct: 658 HCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLE 717
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ I+ T+INGL + L+ AL+ F +K+G +A TYN ++ C S R DA R+
Sbjct: 718 PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARL 777
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------------- 215
+ +M K I PN + ++ +K G EA +++K M R+
Sbjct: 778 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCI 837
Query: 216 -----------------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
G P V TY ++ FC + +V+ M+++ EM +G++
Sbjct: 838 QGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT 897
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
Y+TLI+ C KL+ A K F M+D G+ P ++ L L + G E A+V+ + +
Sbjct: 898 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 957
Query: 319 K 319
K
Sbjct: 958 K 958
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 153/304 (50%), Gaps = 4/304 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G+ + +N LI LC S A + M KR+ DP++ +T L++ + ++ N
Sbjct: 746 MEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 805
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL +Y+EM P++++Y +IN C R +A +F M + C P + T
Sbjct: 806 LLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNT 865
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ + ++ F + +G +A TYN ++ YC + ++N A ++ + M CG
Sbjct: 866 LITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 925
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+I+L L G+ E+A + + + +K + + TY I+++ C N +V A
Sbjct: 926 VPPDIVTYNILLDCLCNNGKIEKALVMVEDL-QKNQMDVDIITYNIIIQGMCRNDKVKEA 984
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV Y T+I+ LC +A K M + G P +++ +
Sbjct: 985 WCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD---ET 1041
Query: 301 LRDE 304
LRD
Sbjct: 1042 LRDH 1045
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 151/306 (49%), Gaps = 2/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQK 59
M K G + + +N LID LCK+ V A E+ ++M KK R D+ +Y LL G
Sbjct: 161 MVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSG 220
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ R+M PDV ++ +I+A DEA EL+++M ++ P+ +
Sbjct: 221 EWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYN 280
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LINGL RL A + F +G P TYN ++ +C S R+ D ++ M +
Sbjct: 281 SLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE 340
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ +T TY+ ++H + G+ A +F M G P + T+ I++ C N ++
Sbjct: 341 GLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMV-SCGVTPDIITHCILLHGLCVNGEIGS 399
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
AM +++M++ + Y+ +I+ LC DK+++A + F + G++P + ++ +
Sbjct: 400 AMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMIL 459
Query: 300 ALRDEG 305
L G
Sbjct: 460 GLCKNG 465
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 138/290 (47%), Gaps = 2/290 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ FG+ +L F LI C+ + A + KM K +DP I ++ LL G+ +
Sbjct: 91 MELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNR 150
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI-FC 119
+ + M G+EP+VV Y +I+ C + A+EL EME + + +
Sbjct: 151 IHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYN 210
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TL+ GL +A + KR P+ T+ A++ A+ +++A + +M +
Sbjct: 211 TLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
IGPNT TY+ +++ L GR A F M+ K G P V TY ++ FC + +V+
Sbjct: 271 SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASK-GCFPNVVTYNTLINGFCKSRRVED 329
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M+++ M G++ Y+TLI+ C KL A F M+ G+ P
Sbjct: 330 GMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTP 379
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 2/288 (0%)
Query: 1 MDKFG-LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M+K G L +L +N L+ LC S +A + M KRR +PD+ ++T L++ + +Q
Sbjct: 196 MEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQG 255
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
NL E+Y++M P+ V+Y +IN C R A + F M + C P+ +
Sbjct: 256 NLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYN 315
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TLING +R+ + ++ F + + G + TYN ++ YC ++ A + M C
Sbjct: 316 TLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSC 375
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P+ T+ I+LH L G A F M R + Y I++ C +V+
Sbjct: 376 GVTPDIITHCILLHGLCVNGEIGSAMVKFNDM-RSGEKYLGIVAYNIMIHGLCKADKVEE 434
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
A ++ + GV P Y+ +I LC +A + F+ M + GI
Sbjct: 435 AWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 134/275 (48%), Gaps = 1/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + L++ C+ + A + D M + +P++ Y ++ G + ++
Sbjct: 676 MMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRD 735
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E++ M+ G D V+Y +I+ C++ R+ +A L R+M P+ F
Sbjct: 736 LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTA 795
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ E L EA + + +R P TYN+++ +C R+ DA M D M G
Sbjct: 796 LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ K+ R E+ +F M+ + G TY ++ +C ++++A
Sbjct: 856 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ-GLVGDAFTYNTLIHGYCQAGKLNVA 914
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
++++ M GV P + Y+ L++ LC+ K++ A
Sbjct: 915 QKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKA 949
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 138/285 (48%), Gaps = 5/285 (1%)
Query: 7 KQELP---DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
Q LP DF RL+ + R E +M+ D+ S+TIL+ + + L
Sbjct: 59 SQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSL 118
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ +M G++P +V++G +++ C R +A L M + +P+ ++ TLI+
Sbjct: 119 ALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLID 178
Query: 124 GLGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
L ++ AL+ + +K+G + TYN ++ C+S A R++ +M K I
Sbjct: 179 CLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRIN 238
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ T+ ++ +K G +EA ++K+M + P TY ++ C + ++ A +
Sbjct: 239 PDVFTFTALIDAFVKQGNLDEAQELYKQM-LQSSIGPNTVTYNSLINGLCMHGRLYHAKK 297
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+D M ++G P + Y+TLIN C +++D K FQ M G+
Sbjct: 298 TFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+++ EM P VV + ++ A + +RY+ + ++ME + F LI+
Sbjct: 51 DLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCF 110
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
RLS AL G+ K G++P T+ +++ +C RI+DA+ ++ M K G PN
Sbjct: 111 CRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNV 170
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
Y+ ++ L K G A + M +K + TY ++ CY+ + A RI
Sbjct: 171 VVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILR 230
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+M R + P + ++ LI++ + LD+A + +++ML I P +++L L G
Sbjct: 231 DMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHG 290
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 2/212 (0%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
R+++A++LF EM + PS F L+ + + +R + F Q + G + ++
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ +C R++ A ++ +M K G P+ T+ +LH R +A+S+ M K
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV-K 163
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV-MHMYSTLINSLCHEDKLD 273
G EP V Y ++ C N V++A+ + +EM+ +G L + Y+TL+ LC+ +
Sbjct: 164 SGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWR 223
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A + ++M I P F+ L A +G
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQG 255
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P + V+ A + + + +M GI + ++ I++H + R A ++
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+M K G +P++ T ++ FC + A+ + D M G+ P + +Y+T+IN LC
Sbjct: 673 LGKM-MKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLC 731
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
L++A + F M GI ++ L L + G A L + + K + P V
Sbjct: 732 KNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNV 790
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 162/324 (50%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++ + ++ +N ++ +LC S ++ A EV D+ +R PD+ +YTIL+E
Sbjct: 200 LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSG 259
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ G +PDVV+Y ++IN C R DEA++ M C+P+
Sbjct: 260 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNI 319
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + S R +A + ++G P T+N ++ C + A ++++M K G
Sbjct: 320 ILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 379
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ +Y+ +LH + + + A + M + G P + TY ++ C + + D A
Sbjct: 380 CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR-GCYPDIVTYNTLLTALCKDGKADAA 438
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I +++ ++G PV+ Y+T+I+ L K + A + +EM G++P +S L +
Sbjct: 439 VEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRG 498
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG + A+ + ++ L P
Sbjct: 499 LGCEGKVDEAIKIFHDMEGLSIKP 522
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 159/329 (48%), Gaps = 7/329 (2%)
Query: 1 MDKFGLKQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+++ + ++PD LI C+S +A + + ++ PD+ +Y +L+ G+ +
Sbjct: 130 LERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCK 189
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ +V M PDVV+Y ++ + C + + EA+E+ C P
Sbjct: 190 SGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVIT 246
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI ++ + +A++ + +K+G +P+ TYN ++ C R+++A + ++ M
Sbjct: 247 YTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 306
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G PN T++I+L + GR +A + M RK G P+V T+ I++ C +
Sbjct: 307 LYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK-GCSPSVVTFNILINFLCRKRLL 365
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A+ + ++M G +P Y+ L++ C E K+D A +Y + M+ G P ++ L
Sbjct: 366 GRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTL 425
Query: 298 KQALRDEGMEETAVVLAQKIDKLRKTPLV 326
AL +G + AV + ++ +P++
Sbjct: 426 LTALCKDGKADAAVEILNQLSSKGCSPVL 454
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 147/303 (48%), Gaps = 1/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K ++ +N LI+ +CK ++ A + + M P++ ++ I+L
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M G P VV++ I+IN C + A+++ +M C P+ +
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNP 389
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G EK++ A+++ RG P+ TYN ++ A C + + A +++++ G
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY+ V+ L K G+TE A + + M RK G +P + TY ++R +VD A
Sbjct: 450 CSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRK-GLKPDIITYSTLLRGLGCEGKVDEA 508
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++I+ +M+ + P Y+ ++ LC + A + M++ G +P ++ L +
Sbjct: 509 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Query: 301 LRD 303
+ D
Sbjct: 569 IAD 571
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 31/190 (16%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L E L+F + +G P+ +++ +C S + A R+M+ + G P+ TY++
Sbjct: 123 LEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNV 182
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTE-------------------------------P 219
++ K+G ++A V +RMS P P
Sbjct: 183 LIGGYCKSGEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYP 242
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY I++ C ++ V AM++ DEM+ +G P + Y+ LIN +C E +LD+A K+
Sbjct: 243 DVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFL 302
Query: 280 QEMLDIGIRP 289
M G +P
Sbjct: 303 NNMPLYGCQP 312
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 165/317 (52%), Gaps = 5/317 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ TLC+ + + A+ V+ +K RF P+++++ ILL GW ++ + ++EMK
Sbjct: 174 FNALLRTLCQEKSMADARNVYHSLK-HRFRPNLQTFNILLSGWKTPED---ADLFFKEMK 229
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G PDVV+Y +++ +C + ++A ++ EM + P + +I GLG +
Sbjct: 230 EMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVITYTCIIGGLGLIGQPD 289
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + K+ G P+A YNA + +C + R+ DA+ +++EM G+ PN TY++
Sbjct: 290 KARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLSPNATTYNLFF 349
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + ++++++RM + G P + ++R+F + +V+MA++ W +M +G
Sbjct: 350 RVFYWSNDLQSSWNMYQRMMVE-GCLPNTQSCMFLIRLFRRHEKVEMALQFWGDMVEKGF 408
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ L + LC KL++A K F EM++ G +P F +K + E
Sbjct: 409 GSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSFRRIKVLMELANRHEALQS 468
Query: 313 LAQKIDKLRKTPLVDRG 329
L QK+ + VD+
Sbjct: 469 LMQKMAMFGRPLQVDQS 485
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 151/303 (49%), Gaps = 7/303 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G Q+L FN ++D LCKS+ VE+A E+F ++ R F D +Y +++ GW K
Sbjct: 150 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSADTVTYNVIVNGWCLIKR 208
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
EV +EM D G P++ +Y M+ A + +A E F EM+ NC+ + T
Sbjct: 209 TPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTT 268
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++G G + F + + G P TYNA + C + +A M +EM + G
Sbjct: 269 VVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKG 328
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY++++ L AG+ + +RM + G EP TY +++R + ++V+ A
Sbjct: 329 YEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENE-GCEPNFQTYNMMIRYYSECSEVEKA 387
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC-----KYFQEMLDIGIRPPGQLFS 295
+ ++++M LP + Y+ LI+ + + +D + +E+L + + G+L
Sbjct: 388 LGLFEKMGTGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSGGRLLR 447
Query: 296 NLK 298
+
Sbjct: 448 KFR 450
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P ++ I+ + S+ + D+AV+LF M C F T+++ L KR+ +A +
Sbjct: 122 PSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 181
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + R F + TYN +V +C R A ++ EM GI PN TY+ +L +
Sbjct: 182 FRALRGR-FSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFR 240
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
AG+ +A+ F M +K E V TY VV F ++ ++DEM GVLP +
Sbjct: 241 AGQIRQAWEFFLEM-KKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVA 299
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
Y+ I LC +D +++A F+EM+ G P ++ L + L G L Q++
Sbjct: 300 TYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRM 359
Query: 318 D 318
+
Sbjct: 360 E 360
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 2/310 (0%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
+ F+ ID + + +M+ R P K++ I+ E + ++
Sbjct: 87 HDASSFDLAIDIAARLHIHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKL 146
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ M + G D+ S+ +++ C +KR ++A ELFR + + + ++NG
Sbjct: 147 FLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSADTV-TYNVIVNGWCL 205
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
KR +AL+ + RG P TYN ++ + + +I A+ EM+K + T
Sbjct: 206 IKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVT 265
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y V+H AG + +VF M R+ G P+V+TY +++ C V+ A+ +++EM
Sbjct: 266 YTTVVHGFGVAGEIKRTRNVFDEMIRE-GVLPSVATYNAFIQVLCKKDSVENAVVMFEEM 324
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+G P + Y+ LI L H K + Q M + G P Q ++ + + +
Sbjct: 325 VRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEV 384
Query: 308 ETAVVLAQKI 317
E A+ L +K+
Sbjct: 385 EKALGLFEKM 394
>gi|242096870|ref|XP_002438925.1| hypothetical protein SORBIDRAFT_10g028400 [Sorghum bicolor]
gi|241917148|gb|EER90292.1| hypothetical protein SORBIDRAFT_10g028400 [Sorghum bicolor]
Length = 485
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 153/292 (52%), Gaps = 3/292 (1%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+ N L+ C V A+ +F + + PD +++ LL G+ + + +++ Y +
Sbjct: 166 ELNALLRAFCARGRVAEARALFHRYCDA-YPPDTRTFNTLLLGFKEAGHAHALDLFYHDA 224
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKR 130
GF PD VSY + ++A+C R+ +A+EL EM + +CKP+ +F TLI G G +
Sbjct: 225 VLRGFVPDAVSYCVRMDAYCKKGRFLDALELLEEMRKKVDCKPTLQVFATLIYGAGIVRS 284
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ A F + +K G P+ +NA++GAY + A +M +M + GIG + +Y+
Sbjct: 285 AARARLLFDEMEKWGVTPDRGAHNALMGAYVRGRDLQSAMTVMGDMERKGIGLDDVSYNT 344
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L + G E + V+ +M G P T +++++FC N + D+ + +WD + +
Sbjct: 345 MLCGFQRVGDLEGIWKVYSKMVSS-GFMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGK 403
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
G +P H L+ LC + +A + F+E++++G+ P + F L+ LR
Sbjct: 404 GCVPHRHALDILVTGLCCRGVVSEAYRCFREIIEMGMAPTERAFRVLEGFLR 455
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+G+ + N L+ + R ++ A V M+++ D SY +L G+ + +
Sbjct: 295 MEKWGVTPDRGAHNALMGAYVRGRDLQSAMTVMGDMERKGIGLDDVSYNTMLCGFQRVGD 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +VY +M GF P + +++ C R D +EL+ + C P H
Sbjct: 355 LEGIWKVYSKMVSSGFMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGKGCVPHRHALDI 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
L+ GL +SEA + F + + G P + + G
Sbjct: 415 LVTGLCCRGVVSEAYRCFREIIEMGMAPTERAFRVLEG 452
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 3/210 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K K L F LI R RA+ +FD+M+K PD ++ L+ + + ++L
Sbjct: 262 KVDCKPTLQVFATLIYGAGIVRSAARARLLFDEMEKWGVTPDRGAHNALMGAYVRGRDLQ 321
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
S V +M+ G D VSY M+ + +++ +M ++ P L+
Sbjct: 322 SAMTVMGDMERKGIGLDDVSYNTMLCGFQRVGDLEGIWKVYSKMVSSGFMPRTRTTMLLM 381
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
R L+ + +G P + +V C +++AYR E+ + G+
Sbjct: 382 KVFCENGRPDLGLELWDYLMGKGCVPHRHALDILVTGLCCRGVVSEAYRCFREIIEMGMA 441
Query: 183 PNTRTYDIV---LHHLIKAGRTEEAYSVFK 209
P R + ++ L + G+ EE + K
Sbjct: 442 PTERAFRVLEGFLRRTRELGKVEEIRQMMK 471
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 165/319 (51%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ +L FN +I+ C V A V KM K ++PD + L+ G+ ++
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G+ PD+V+Y +I++ C +R ++A++ F+E+ +P+ +
Sbjct: 171 VSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTA 230
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL + R ++A + KR P TY+A++ A+ + ++ +A + +EM +
Sbjct: 231 LVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY +++ L R +EA +F M K G P V +Y ++ FC +V+
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCFPDVVSYNTLINGFCKAKRVEDG 349
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+++ +M RG++ Y+TLI +D A ++F +M G+ P ++ L
Sbjct: 350 MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG 409
Query: 301 LRDEGMEETAVVLAQKIDK 319
L D G+ E A+V+ + + K
Sbjct: 410 LCDNGLLEKALVIFEDMQK 428
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 155/316 (49%), Gaps = 1/316 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ DFNRL+ + K + + + KM+ D+ ++ I++ + + V
Sbjct: 84 SIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSVL 143
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPD V+ G ++N C R +AV L +M +P + +I+ L
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKT 203
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+R+++AL FF + ++G P TY A+V C S R NDA R++ +M K I PN TY
Sbjct: 204 RRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITY 263
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+L +K G+ EA +F+ M R +P + TY ++ C + ++D A +++D M
Sbjct: 264 SALLDAFVKNGKVLEAKEIFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
++G P + Y+TLIN C +++D K F++M G+ ++ L Q G +
Sbjct: 323 SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVD 382
Query: 309 TAVVLAQKIDKLRKTP 324
A ++D +P
Sbjct: 383 KAQEFFSQMDSFGVSP 398
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 159/317 (50%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ +N +ID+LCK+R V A + F ++ ++ P++ +YT L+ G
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGR 240
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R+M P+V++Y +++A + EA E+F EM + P + +
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSS 300
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL R+ EA Q F +G P+ +YN ++ +C + R+ D ++ +M + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG 360
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ NT TY+ ++ + G ++A F +M G P + TY I++ C N ++ A
Sbjct: 361 LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMD-SFGVSPDIWTYNILLGGLCDNGLLEKA 419
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I+++M+ + + Y+T+I +C K++DA F + G++P ++ +
Sbjct: 420 LVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 301 LRDEGMEETAVVLAQKI 317
L +G++ L K+
Sbjct: 480 LCTKGLQHEVEALYTKM 496
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 9/278 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L+D K+ V A+E+F++M + DPDI +Y+ L+ G + N+++ M
Sbjct: 263 YSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDVVSY +IN C AKR ++ ++LFR+M + + TLI G +
Sbjct: 323 SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVD 382
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A +FF Q G P+ TYN ++G C + + A + ++M+K + + TY V+
Sbjct: 383 KAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVI 442
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K G+ E+A+ +F +S K G +P + TY ++ C ++ +MK G+
Sbjct: 443 QGMCKTGKVEDAWGLFCSLSLK-GLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501
Query: 253 LPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRP 289
+ M LC D + + + ++ML G P
Sbjct: 502 MKNDSM-------LCLGDGDITISAELIKKMLSCGYAP 532
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 1/275 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
RL T + + A +F +M K R P I + LL + K + + ++M+
Sbjct: 55 RLSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVL 114
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G D+ ++ I+IN C + A+ + +M +P +L+NG R+S+A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ + + G+ P+ YNA++ + C + R+NDA E+ + GI PN TY +++
Sbjct: 175 VSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNG 234
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L +GR +A + + M ++ T P V TY ++ F N +V A I++EM + P
Sbjct: 235 LCNSGRWNDAARLLRDMIKRKIT-PNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDP 293
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ YS+LIN LC D++D+A + F M+ G P
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFP 328
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 101/214 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + ++ ++ LI+ LC ++ A ++FD M + PD+ SY L+ G+ + K
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKR 345
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++R+M G + V+Y +I D+A E F +M++ P +
Sbjct: 346 VEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNI 405
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL L +AL F +K + + TY V+ C + ++ DA+ + + G
Sbjct: 406 LLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKG 465
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+ P+ TY ++ L G E +++ +M ++
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQE 499
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 87/180 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N LI+ CK++ VE ++F KM +R + +Y L++G+ Q ++
Sbjct: 325 GCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKA 384
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + +M G PD+ +Y I++ C ++A+ +F +M+ + + T+I G
Sbjct: 385 QEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQG 444
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ +A F +G +P+ TY ++ C ++ + +M++ G+ N
Sbjct: 445 MCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKN 504
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L +A+ F + K P +N ++ A + + + +M GI + T++
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
IV++ + A SV +M K G EP T +V FC +V A+ + D+M
Sbjct: 125 IVINCFCCCFQVSLALSVLGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G P + Y+ +I+SLC +++DA +F+E+ GIRP ++ L L + G
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243
Query: 310 AVVLAQKIDKLRKTPLV 326
A L + + K + TP V
Sbjct: 244 AARLLRDMIKRKITPNV 260
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL +N LI + V++AQE F +M PDI +Y ILL G
Sbjct: 356 MSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGL 415
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ +M+ + D+V+Y +I C + ++A LF + KP + T
Sbjct: 416 LEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTT 475
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGF 146
+++GL ++ E + + K+ G
Sbjct: 476 MMSGLCTKGLQHEVEALYTKMKQEGL 501
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 61/119 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ +N L+ LC + +E+A +F+ M+K D DI +YT +++G +
Sbjct: 391 MDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGK 450
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ ++ + G +PD+V+Y M++ C+ E L+ +M+ + + C
Sbjct: 451 VEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLC 509
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 155/317 (48%), Gaps = 11/317 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+DTLCK +V+ E+F+K +K RF P++K YT+L+ GW + + +E
Sbjct: 214 FCFLLDTLCKYGYVKVGVEIFNK-RKHRFSPNVKMYTVLIYGWCKIGRIDMAERFLKETG 272
Query: 73 DDGFEPDVVSYGIMINAHC------SAKRYDEAV----ELFREMEATNCKPSPHIFCTLI 122
+ G E VV+Y +++N C R++ + LF EM +P F ++
Sbjct: 273 ERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIEPDVTSFSIVL 332
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ + L K++G P TY +VV C RI DA ++ EM + G+
Sbjct: 333 HVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAEELLGEMVRNGVS 392
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
TY+ + E A ++K+M + +Y I++RMF ++D+
Sbjct: 393 RTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNE 452
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
IW+++K+ G+ P + Y+ LI+ LC ++K +ACK+F EM++ G+ P F L + L
Sbjct: 453 IWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLI 512
Query: 303 DEGMEETAVVLAQKIDK 319
M T L +K+D+
Sbjct: 513 QSDMLRTWRRLKKKLDE 529
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 106/252 (42%), Gaps = 46/252 (18%)
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG- 139
V+Y +MI+ +++D +L EM+ N KP+ F LI L + +A++ F
Sbjct: 141 VTYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTSETFFVLIRRLVAAGLTRQAIRAFDD 200
Query: 140 ----------------------------------QSKKRGFEPEAPTYNAVVGAYCWSMR 165
+K F P Y ++ +C R
Sbjct: 201 MESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGR 260
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE----------AYSVFKRMSRKP 215
I+ A R + E + GI TY+++L+ + + A ++F M R+
Sbjct: 261 IDMAERFLKETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEM-RER 319
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G EP V+++ IV+ ++ + ++ + MK +G+ P + Y++++ LC +++DA
Sbjct: 320 GIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDA 379
Query: 276 CKYFQEMLDIGI 287
+ EM+ G+
Sbjct: 380 EELLGEMVRNGV 391
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 103/250 (41%), Gaps = 39/250 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ ++ F+ ++ ++ E + MK++ P + +YT +++
Sbjct: 316 MRERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGR 375
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ EM +G V+Y + K + A++L+++M
Sbjct: 376 IEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMRE------------ 423
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+GLGS G +YN ++ + R++ + ++++ G
Sbjct: 424 --DGLGS----------------LGLH----SYNILLRMFMMLNRLDIVNEIWEDLKSSG 461
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+GP+ +Y +++H L + + EA F M K G P T+E + + Q DM
Sbjct: 462 LGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEK-GLLPQKVTFETLYKGL---IQSDM- 516
Query: 241 MRIWDEMKAR 250
+R W +K +
Sbjct: 517 LRTWRRLKKK 526
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 159/313 (50%), Gaps = 2/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL+ ++ +I LCK R A VF+ M ++ ++ YT L++ + + +
Sbjct: 314 MEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGS 373
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ MK++GFEPD V+Y +++N C + R D+ +ELF + + +
Sbjct: 374 MEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYAS 433
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GLG R+ +A F + ++G ++ YNA++ A +I+ A + M + G
Sbjct: 434 LIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEG 493
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
T+ I++ L K + EEA + +M K G PTV+++ + C +V A
Sbjct: 494 CDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDK-GITPTVASFRALAIGLCLCGKVARA 552
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+I D++ G++P + +IN+LC ++ +ACK ++D G PG++ + L A
Sbjct: 553 CKILDDLAPMGIIPETA-FEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINA 611
Query: 301 LRDEGMEETAVVL 313
LR G + + L
Sbjct: 612 LRKAGNSDLVIKL 624
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 149/306 (48%), Gaps = 1/306 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N LI + VE V+ +MK+ DP + +Y L+ G + S +V+ M
Sbjct: 187 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 246
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
PD V+Y IMI +C A + +A+E FR+ME N KP + TLI SE+
Sbjct: 247 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 306
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
L + + ++RG E +Y+ V+G C + +AY + + M + G N Y ++
Sbjct: 307 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 366
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
K G EEA +F+RM + G EP TY ++V C + ++D M ++D + +GV
Sbjct: 367 SYSKNGSMEEAMRLFERM-KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVA 425
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
Y++LI+ L +++DA F+EM + G ++ + AL G + A+ L
Sbjct: 426 INAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALAL 485
Query: 314 AQKIDK 319
++++
Sbjct: 486 FGRMEE 491
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 149/295 (50%), Gaps = 4/295 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD +N +I CK+ +++A E F M+ + PD +Y L++ +++ +
Sbjct: 250 VPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLS 309
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y EM++ G E SY ++I C ++ EA +F M C+ + I+ LI+
Sbjct: 310 LYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYS 369
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ EA++ F + K GFEP+A TY+ +V C S R++D + D R G+ N
Sbjct: 370 KNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAM 429
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y ++ L KAGR E+A ++F+ MS K G Y ++ + ++D A+ ++
Sbjct: 430 FYASLIDGLGKAGRIEDAENLFEEMSEK-GCARDSYCYNAIIDALAKHGKIDQALALFGR 488
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M+ G ++ ++ LI+ L E K ++A K++ +M+D GI P F L L
Sbjct: 489 MEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGL 543
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 128/286 (44%), Gaps = 2/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + + + LID+ K+ +E A +F++MK F+PD +Y++L+ G +
Sbjct: 349 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGR 408
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ ++ G + + Y +I+ A R ++A LF EM C + +
Sbjct: 409 LDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNA 468
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ +AL FG+ ++ G + T+ ++ + +A + D+M G
Sbjct: 469 IIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKG 528
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P ++ + L G+ A + ++ G P + +E ++ C ++ A
Sbjct: 529 ITPTVASFRALAIGLCLCGKVARACKILDDLA-PMGIIPE-TAFEDMINTLCKAQRIKEA 586
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ D + RG + + LIN+L D K + IG
Sbjct: 587 CKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIG 632
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 134/309 (43%), Gaps = 36/309 (11%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
K++++ I+ + L+E +L+ + V+ E+KD G + +I + +
Sbjct: 140 KQKKYVHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLV 199
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+E + ++R M+ PS + + L+NGL + + A + F P+ TYN +
Sbjct: 200 EELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIM 259
Query: 157 VGAYCWSMRINDA---YRMMD--------------------------------EMRKCGI 181
+ YC + ++ A +R M+ EM + G+
Sbjct: 260 IKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGL 319
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
+Y +V+ L K + EAY+VF+ M++K G V+ Y ++ + N ++ AM
Sbjct: 320 EIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQK-GCRANVAIYTALIDSYSKNGSMEEAM 378
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R+++ MK G P YS L+N LC +LDD + F + G+ +++L L
Sbjct: 379 RLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGL 438
Query: 302 RDEGMEETA 310
G E A
Sbjct: 439 GKAGRIEDA 447
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 145/289 (50%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G+ ++ +N LI LC S A + M KR PD+ ++ L++ ++
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E Y EM +PD+V+Y ++I C R DEA E+F M + C P +
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING K++ ++ F + +RG TY ++ YC + ++N A + M CG
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+++LH L G+ E+A + M +K G + + TY I++R C +V A
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADM-QKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
I+ + +G++P + Y+T++ L + +A F++M + GI P
Sbjct: 451 WDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 158/319 (49%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ L N L++ C+ + A KM K +P I ++ LL G+ +
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M G++P+VV Y +I+ C +K+ D A++L ME P + +
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL S R S+A + KR P+ T+NA++ A R+++A +EM +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++++ L R +EA +F M K G P V TY I++ +C + +V+
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK-GCFPDVVTYSILINGYCKSKKVEHG 345
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+++ EM RGV+ Y+ LI C KL+ A + F+ M+ G+ P ++ L
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 301 LRDEGMEETAVVLAQKIDK 319
L D G E A+V+ + K
Sbjct: 406 LCDNGKIEKALVILADMQK 424
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 151/317 (47%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K + +N +ID LCKS+ V+ A ++ ++M+K PD+ +Y L+ G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M PDV ++ +I+A R EA E + EM + P +
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL RL EA + FG +G P+ TY+ ++ YC S ++ ++ EM + G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ NT TY I++ +AG+ A +F+RM G P + TY +++ C N +++ A
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF-CGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I +M+ G+ + Y+ +I +C ++ DA + + G+ P ++ +
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 301 LRDEGMEETAVVLAQKI 317
L +G+ A L +K+
Sbjct: 476 LYKKGLRREADALFRKM 492
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 1/287 (0%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
D+ ++ + ++ + ++F M + R P I ++ LL + K + ++ +
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M+ G ++ + I++N C + A+ +M +PS F +L+NG R
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ +AL F Q G++P YN ++ C S ++++A +++ M K GIGP+ TY+
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L +GR +A + M+++ P V T+ ++ +V A ++EM R
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKRE-IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ P + YS LI LC +LD+A + F M+ G P +S L
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSIL 332
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ ++ +N +I +CK+ V A +++ + + PDI +YT ++ G ++
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 61 LLSMNEVYREMKDDGFEPD 79
+ ++R+MK+DG P+
Sbjct: 482 RREADALFRKMKEDGILPN 500
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 148/288 (51%), Gaps = 1/288 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
G+K + N +I++LC + V V M K +P + ++TIL+ G + ++
Sbjct: 103 SSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDV 162
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
E+ ++ G+ DV +YG++IN C + EAV R+ME N P+ ++ T+
Sbjct: 163 GRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTV 222
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++GL + +SEAL + +G +P TY ++ C R +A ++DEM K G+
Sbjct: 223 MDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGV 282
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ ++ +I++ L K G+ +A SV M G P V TY ++ +C Q+D A
Sbjct: 283 MPDLQSLNILVDVLCKEGKIMQAKSVIGFMIL-VGEVPDVFTYNSLIDRYCLQNQMDEAT 341
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
R+++ M +RG LP + Y++LI+ C ++ A EM+ +G P
Sbjct: 342 RVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTP 389
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 140/304 (46%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K L + LI LC + A + D+M K PD++S IL++ ++
Sbjct: 242 MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ V M G PDV +Y +I+ +C + DEA +F M + C P + +
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTS 361
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G K +++A+ + K GF P+ T+ ++G +C R A + M K G
Sbjct: 362 LIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYG 421
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +T I+L L K+ EA S+F M K + + Y I++ C +++ A
Sbjct: 422 QVPNLQTCAIILDGLCKSQLLSEALSLFHAM-EKSNLDLNIVIYSIILDGMCSAGKLNTA 480
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ + A+G+ ++ Y+ +IN + LD A M + G P ++ Q
Sbjct: 481 LELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQG 540
Query: 301 LRDE 304
L E
Sbjct: 541 LVAE 544
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 141/319 (44%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL+ + F LI+ LC V RA E+ D ++K + D+K+Y +L+ G +
Sbjct: 137 MLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGK 196
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
R+M++ + P+VV Y +++ C EA+ L EM KP+ +
Sbjct: 197 TSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTC 256
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL + R EA + K G P+ + N +V C +I A ++ M G
Sbjct: 257 LIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVG 316
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ + +EA VF+ M + G P + Y ++ +C ++ A
Sbjct: 317 EVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSR-GCLPDIVAYTSLIHGWCKIKNINKA 375
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + DEM G P + ++TLI C + A + F M G P Q + +
Sbjct: 376 MHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDG 435
Query: 301 LRDEGMEETAVVLAQKIDK 319
L + A+ L ++K
Sbjct: 436 LCKSQLLSEALSLFHAMEK 454
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 9/259 (3%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCKPSPHIFCTLINGLGSEKRLSEALQ 136
P V+ + +++ K Y A+ L +EM ++ KP I +IN L K ++
Sbjct: 73 PSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFS 132
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
G K G EP T+ ++ C + A ++D + K G + +TY ++++ L
Sbjct: 133 VLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLC 192
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K G+T EA ++M + P V Y V+ C + V A+ + EM +G+ P +
Sbjct: 193 KMGKTSEAVGWLRKMEER-NWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNL 251
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG--MEETAVV-- 312
Y+ LI LC+ + +A EM+ +G+ P Q + L L EG M+ +V+
Sbjct: 252 VTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGF 311
Query: 313 ---LAQKIDKLRKTPLVDR 328
+ + D L+DR
Sbjct: 312 MILVGEVPDVFTYNSLIDR 330
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 152/346 (43%), Gaps = 17/346 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K G + ++ + LI+ LCK A KM++R ++P++ Y+ +++G +
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 231
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM G +P++V+Y +I C+ R+ EA L EM P
Sbjct: 232 VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 291
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L E ++ +A G G P+ TYN+++ YC ++++A R+ + M G
Sbjct: 292 LVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRG 351
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y ++H K +A + M K G P V T+ ++ FC + A
Sbjct: 352 CLPDIVAYTSLIHGWCKIKNINKAMHLLDEM-IKVGFTPDVVTWTTLIGGFCQVGRPLAA 410
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM----LDI----------G 286
++ M G +P + + +++ LC L +A F M LD+ G
Sbjct: 411 KELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDG 470
Query: 287 IRPPGQLFSNLK--QALRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
+ G+L + L+ L +G++ I+ K L+D+ +
Sbjct: 471 MCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAE 516
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 113/229 (49%), Gaps = 6/229 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + LI CK +++ +A + D+M K F PD+ ++T L+ G+ Q L+ E
Sbjct: 353 LPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKE 412
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M G P++ + I+++ C ++ EA+ LF ME +N + I+ +++G+
Sbjct: 413 LFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMC 472
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
S +L+ AL+ F +G + Y ++ + ++ A ++ M + G P++
Sbjct: 473 SAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSC 532
Query: 187 TYDIVLHHLIKAGRTEEAYSV-FKRMSRKPGTEPTVSTYEIVVRMFCYN 234
TY++ + L+ E A S+ + M R G +T E+++ N
Sbjct: 533 TYNVFVQGLV--AEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTN 579
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G L ++D LCKS+ + A +F M+K D +I Y+I+L+G
Sbjct: 417 MHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGK 476
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E++ + G + +V +Y IMIN D+A +L ME C P +
Sbjct: 477 LNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNV 536
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ GL +E+ ++ ++++ + +GF +A T ++
Sbjct: 537 FVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMII 573
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 93/195 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G ++ + LI C+ A+E+F M K P++++ I+L+G + +
Sbjct: 382 MIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQL 441
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ M+ + ++V Y I+++ CSA + + A+ELF + A + + + +
Sbjct: 442 LSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTI 501
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ING + L +A ++ G P++ TYN V I + + + MR G
Sbjct: 502 MINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKG 561
Query: 181 IGPNTRTYDIVLHHL 195
+ T ++++++L
Sbjct: 562 FSVDATTTEMIINYL 576
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 2/232 (0%)
Query: 94 KRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPT 152
K DEA+ F M N PS F L+ + K + A+ + G +P+
Sbjct: 54 KSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFI 113
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
N V+ + C + + ++ M K G+ P+ T+ I+++ L G A + +
Sbjct: 114 LNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHV- 172
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
K G V TY +++ C + A+ +M+ R P + +YST+++ LC + +
Sbjct: 173 EKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLV 232
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+A EM GI+P ++ L Q L + G + A L ++ K+ P
Sbjct: 233 SEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 2/190 (1%)
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC-GIGPN 184
G K + EAL FF K P + ++G A ++ EM GI P+
Sbjct: 51 GKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPD 110
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++V++ L +SV M K G EP+V T+ I++ C V A+ +
Sbjct: 111 TFILNVVINSLCHLKLVAFGFSVLGTM-LKLGLEPSVVTFTILINGLCVKGDVGRAVELV 169
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D ++ G + Y LIN LC K +A + ++M + P ++S + L +
Sbjct: 170 DHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKD 229
Query: 305 GMEETAVVLA 314
G+ A+ L
Sbjct: 230 GLVSEALGLC 239
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + FN LI LC++ ER EV +M + PDI+ Y +++G ++ +
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 312
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +E+ M G +P+VV Y ++ CSA+R++E EL EM +C F
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ + ++ Q +RG P+ TY V+ +C I++A ++ M CG
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT +Y IVL L A R +A + +M ++ G T+ ++ C V+ A
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ-GCPLNPITFNTLINFLCKKGLVEQA 491
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +M G P + YST+I+ L K D+A + M++ G+ P ++S++ A
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551
Query: 301 LRDEG 305
L EG
Sbjct: 552 LSREG 556
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 144/311 (46%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + +ID +CK H+E A E+ ++M P++ Y LL+G +
Sbjct: 288 MVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 347
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM D D V++ I+++ C D +EL +M C P + T
Sbjct: 348 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTT 407
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ING E + EA+ G +P +Y V+ C + R DA +M +M + G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N T++ +++ L K G E+A + K+M G P + +Y V+ + D A
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTVIDGLGKAGKTDEA 526
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + + M +G+ P +YS++ ++L E +++ + F + D IR L++ + +
Sbjct: 527 LELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISS 586
Query: 301 LRDEGMEETAV 311
L G E A+
Sbjct: 587 LCKRGETERAI 597
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N L+ LC + E +E+ +M + D ++ IL++ + Q
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 382
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M + G PDV++Y +IN C DEAV L + M A CKP+ +
Sbjct: 383 VDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL S +R +A Q ++G T+N ++ C + A ++ +M G
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+T+EA + M K G P Y + +++
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK-GMSPNTIIYSSIASALSREGRINKV 561
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D ++ + +Y+ +I+SLC + + A ++ M+ G P ++ L +
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621
Query: 301 LRDEGMEETA 310
L EG + A
Sbjct: 622 LASEGFVKEA 631
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G P ++ +++ C+ A V + + R D+ + ++L Q +
Sbjct: 148 MPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 207
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R++ G EPDVVSY ++ C AKR+ EL EM C P+ F T
Sbjct: 208 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + Q + G P+ Y ++ C + A+ +++ M G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 327
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y+ +L L A R EE + M K V T+ I+V FC N VD
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV-TFNILVDFFCQNGLVDRV 386
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + ++M RG +P + Y+T+IN C E +D+A + M G +P
Sbjct: 387 IELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 35/245 (14%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQ 58
G ++ + +I+ CK ++ A + M P+ SYTI+L+G W
Sbjct: 397 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 456
Query: 59 KNLLS--------MN---------------------EVYREMKDDGFEPDVVSYGIMINA 89
++L+S +N E+ ++M +G PD++SY +I+
Sbjct: 457 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 516
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
A + DEA+EL M P+ I+ ++ + L E R+++ +Q F + +
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 576
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
A YNAV+ + C A + M G PN TY I++ L G +EA +
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 636
Query: 210 RMSRK 214
+ K
Sbjct: 637 ELCSK 641
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 4/228 (1%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y M+ +C A + + A L A P+ + + ++ L + R+++AL +
Sbjct: 93 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+RG P P Y+ ++ A C A R+++++ G + ++VL+ + G +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA + + + G EP V +Y V++ C + + +EM P + ++TL
Sbjct: 210 EALHLLRDLPSF-GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
I+ LC + + +M++ G P ++++ + + EG E A
Sbjct: 269 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 316
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 35/168 (20%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI+ LCK VE+A E+ +M PD+ SY+ +++G G+ E+ M
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 73 DDGFEP-----------------------------------DVVSYGIMINAHCSAKRYD 97
+ G P D V Y +I++ C +
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
A+E M ++ C P+ + LI GL SE + EA + + +G
Sbjct: 595 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 154/290 (53%), Gaps = 1/290 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK V +A++VF+ + P Y L+ G+ Q ++L ++ +MK
Sbjct: 340 LLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PD ++Y +IN C + +A +L EME + PS F TLI+ G+ +L +
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+++G + + ++ +VV A+C + +I +A ++D+M + PN + Y+ ++
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
I++G TE+A + ++M + G ++ TY ++++ C ++Q+D A + ++ +G+ P
Sbjct: 520 IESGDTEQALLLVEKM-KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ Y+T+I++ C++ D A + QEM GIRP + L AL G
Sbjct: 579 VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAG 628
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 161/355 (45%), Gaps = 36/355 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N L+ LC++ ++ + + D+M PD +Y+IL +G + +M
Sbjct: 259 GPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTM 318
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ E G + I++N C + +A ++F + T P+ I+ TLING
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLING 378
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L A F Q K R P+ TYNA++ C + A ++ EM K G+ P+
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ AG+ E+ ++V M +K G + V ++ VV+ FC N ++ A+ I
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQK-GIKSDVISFGSVVKAFCKNGKIPEAVAIL 497
Query: 245 DEMKARGVLPVMHMYSTLINS-----------------------------------LCHE 269
D+M + V P +Y+++I++ LC
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRS 557
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++D+A + + + G+RP ++ + A ++G + A+ L Q+++K P
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 132/275 (48%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ LCK V +A+++ +M+K DP ++++ L++ +G L V +M+
Sbjct: 407 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ 466
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + DV+S+G ++ A C + EAV + +M + P+ ++ ++I+
Sbjct: 467 QKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTE 526
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL + K G TYN ++ C S +I++A ++ +R G+ P+ +Y+ ++
Sbjct: 527 QALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTII 586
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
G T++A + + M+ K G PT+ T +V +V ++ +M + V
Sbjct: 587 SACCNKGDTDKALELLQEMN-KYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNV 645
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
P +Y ++++ + +EM + GI
Sbjct: 646 EPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 153/340 (45%), Gaps = 36/340 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I L +S A +VFD+M P+ +Y +++G + +L + + +M
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML 256
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF-------------- 118
DG +P+VV+Y ++++ C R DE L EM + + P +
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316
Query: 119 --------------------CT-LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
C+ L+NGL + ++++A Q F G P YN ++
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + A+ + ++M+ I P+ TY+ +++ L K +A + M K G
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM-EKSGV 435
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P+V T+ ++ + Q++ + +M+ +G+ + + +++ + C K+ +A
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+M+ + P Q+++++ A + G E A++L +K+
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 138/322 (42%), Gaps = 6/322 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDP--DIKSYTILLEG-WGQQKNLLSMNEVYR 69
+N+++ + ++ A + +M + P D SY +++ G W K ++ +V+
Sbjct: 160 WNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL-KVFD 218
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM D G P+ ++Y MI+ H + L +M KP+ + L++GL
Sbjct: 219 EMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTG 278
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R+ E + P+ TY+ + + + E K G+ T
Sbjct: 279 RMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCS 338
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I+L+ L K G+ +A VF+ M G PT Y ++ +C + A I+++MK+
Sbjct: 339 ILLNGLCKDGKVAKAKQVFE-MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKS 397
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEE 308
R + P Y+ LIN LC + + A EM G+ P + F+ L A G +E+
Sbjct: 398 RHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEK 457
Query: 309 TAVVLAQKIDKLRKTPLVDRGQ 330
VL+ K K+ ++ G
Sbjct: 458 CFTVLSDMQQKGIKSDVISFGS 479
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 3/257 (1%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P + S +LLE + + + G PD ++ ++ A +A D A+ +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 103 FREMEATNCKPSPHIFC--TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
R M + P P F +I GL + S+AL+ F + G P TYN ++ +
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
+ +R+ D+M G PN TY+++L L + GR +E ++ M+ P
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASH-SMLPD 298
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
TY I+ + + ++ E +GV+ + S L+N LC + K+ A + F+
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358
Query: 281 EMLDIGIRPPGQLFSNL 297
++ G+ P +++ L
Sbjct: 359 MLVHTGLVPTTVIYNTL 375
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 36/252 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ F ++ CK+ + A + D M + P+ + Y +++ + + +
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +MK+ G +V+Y +++ C + + DEA EL +
Sbjct: 525 TEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL-------------- 570
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ +G P+ +YN ++ A C + A ++ EM K G
Sbjct: 571 ---------------------RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P RT ++ L AGR + ++++M K EP+ S Y I+V +
Sbjct: 610 IRPTLRTCHTLVSALASAGRVHDMECLYQQMLHK-NVEPSSSIYGIMVDAYVRCENDSKV 668
Query: 241 MRIWDEMKARGV 252
+ EM +G+
Sbjct: 669 ASLKKEMSEKGI 680
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P + N ++ + + R D + G P+T ++ V+ + AG + A ++
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 208 FKRMSRKPGTEPTVS-TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+RM R G P + +Y +V+ + + A++++DEM GV P Y+T+I+
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVL 313
L+ + +ML G +P ++ L L G M+ET ++
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALM 287
>gi|115469690|ref|NP_001058444.1| Os06g0694600 [Oryza sativa Japonica Group]
gi|53791827|dbj|BAD53893.1| pentatricopeptide repeat-containing protein-like [Oryza sativa
Japonica Group]
gi|53792848|dbj|BAD53881.1| pentatricopeptide repeat-containing protein-like [Oryza sativa
Japonica Group]
gi|113596484|dbj|BAF20358.1| Os06g0694600 [Oryza sativa Japonica Group]
Length = 484
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 153/292 (52%), Gaps = 3/292 (1%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+ N L+ C V A+ +F + + PD +++ LL G+ + N +++ Y +
Sbjct: 165 ELNALLRAFCARGRVAEARALFHRYCDA-YPPDARTFNTLLLGFKEAGNAQALDLFYHDA 223
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKR 130
GF PD VSY + ++A+C R+ +A++L EM + NC+P+ +F TLI G G +
Sbjct: 224 VLRGFVPDAVSYCVRMDAYCKKGRFLDALDLLDEMRKRENCRPTLQVFTTLIYGAGIVRN 283
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
A Q F + + G P+ +NA++GAY + + +M EM + GIG + +Y+
Sbjct: 284 AIRARQLFDEMGQWGVTPDRGAHNALMGAYVRARDLQSGMTVMSEMERKGIGLDDVSYNT 343
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L + G E + V+ +M G P T +++++FC NA+ D+ + +WD + +
Sbjct: 344 MLCGFQRIGDLEGIWKVYSKMVGS-GFMPRTRTTMLLMKVFCENARPDLGLELWDYLLGK 402
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
G +P H L+ LC + +A + F+EM+++G+ P + F L+ L+
Sbjct: 403 GCVPHRHALDVLVTGLCCRGVVLEAYRCFREMIEMGMTPTERAFRVLEGFLK 454
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++G+ + N L+ ++R ++ V +M+++ D SY +L G+ + +
Sbjct: 294 MGQWGVTPDRGAHNALMGAYVRARDLQSGMTVMSEMERKGIGLDDVSYNTMLCGFQRIGD 353
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +VY +M GF P + +++ C R D +EL+ + C P H
Sbjct: 354 LEGIWKVYSKMVGSGFMPRTRTTMLLMKVFCENARPDLGLELWDYLLGKGCVPHRHALDV 413
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
L+ GL + EA + F + + G P + + G
Sbjct: 414 LVTGLCCRGVVLEAYRCFREMIEMGMTPTERAFRVLEG 451
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 156/293 (53%), Gaps = 7/293 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++G + + +++ +CKS A E+ KM++R D Y+I+++G + +
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + ++ EM+ G ++++Y I+I C+A R+D+ +L R+M P+ F
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 436
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ E +L EA + + RG P+ TY +++ +C ++ A +M+D M G
Sbjct: 437 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN RT++I+++ KA R ++ +F++MS + TV TY +++ FC ++++A
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLNVA 555
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDIGI 287
++ EM +R V P + Y L++ LC + + A + F+++ LDIGI
Sbjct: 556 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 608
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 160/319 (50%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + +N LI C + + ++ M KR+ +P++ ++++L++ + ++
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 446
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+++EM G PD ++Y +I+ C D+A ++ M + C P+ F
Sbjct: 447 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 506
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING R+ + L+ F + RG + TYN ++ +C ++N A + EM
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY I+L L G +E+A +F+++ K E + Y I++ C ++VD A
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDA 625
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I LC + L +A F++M + G P G ++ L +A
Sbjct: 626 WDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRA 685
Query: 301 LRDEGMEETAVVLAQKIDK 319
+G +V L +++ +
Sbjct: 686 HLGDGDATKSVKLIEELKR 704
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 2/322 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + F+ LI+ LC V A E+ D+M + PD+ + L+ G
Sbjct: 249 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 308
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ +M + G +P+ V+YG ++N C + + A+EL R+ME N K + +I
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 368
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL L A F + + +G TYN ++G +C + R +D +++ +M K I
Sbjct: 369 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 428
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN T+ +++ +K G+ EA + K M + G P TY ++ FC +D A +
Sbjct: 429 PNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKANQ 487
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D M ++G P + ++ LIN C +++DD + F++M G+ ++ L Q
Sbjct: 488 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 547
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
+ G A L Q++ RK P
Sbjct: 548 ELGKLNVAKELFQEMVS-RKVP 568
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 137/277 (49%), Gaps = 6/277 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + LID CK H+++A ++ D M + DP+I+++ IL+ G+ + +
Sbjct: 461 GIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG 520
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++R+M G D V+Y +I C + + A ELF+EM + P+ + L++G
Sbjct: 521 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 580
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +AL+ F + +K E + YN ++ C + +++DA+ + + G+ P
Sbjct: 581 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 640
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+TY+I++ L K G EA +F++M + G P TY I++R + ++++
Sbjct: 641 VKTYNIMIGGLCKKGPLSEAELLFRKM-EEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 699
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
+E+K G +I+ L DD YF +
Sbjct: 700 EELKRCGFSVDASTIKMVIDMLS-----DDKANYFSK 731
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 145/306 (47%), Gaps = 8/306 (2%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A ++F M R P + ++ L + K + + ++M+ G ++ + IMIN
Sbjct: 170 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 229
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C ++ A ++ +P+ F TLINGL E R+SEAL+ + + G +P
Sbjct: 230 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 289
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ T N +V C S + +A ++D+M + G PN TY VL+ + K+G+T A +
Sbjct: 290 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 349
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
++M + + Y I++ C + +D A +++EM+ +G+ + Y+ LI C+
Sbjct: 350 RKMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 408
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI-------DKLR 321
+ DD K ++M+ I P FS L + EG A L +++ D +
Sbjct: 409 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 468
Query: 322 KTPLVD 327
T L+D
Sbjct: 469 YTSLID 474
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 96/223 (43%), Gaps = 36/223 (16%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK------------------------- 129
+ D+A++LFR+M + P+ F L + + K
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225
Query: 130 ----------RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+L A G+ K G+EP T++ ++ C R+++A ++D M +
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ T + +++ L +G+ EA + +M G +P TY V+ + C + Q +
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKSGQTAL 344
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
AM + +M+ R + YS +I+ LC LD+A F EM
Sbjct: 345 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K ++ ++ +N +I +C + V+ A ++F + + P +K+Y I++ G ++
Sbjct: 597 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 656
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++R+M++DG PD +Y I+I AH ++V+L E++
Sbjct: 657 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 716
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGF--EPEAPT 152
+I+ L S+ + + ++ SK F +PE P+
Sbjct: 717 VIDML-SDDKANYFSKYHNCSKSTSFWNQPEKPS 749
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 165/329 (50%), Gaps = 5/329 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
+K L+ PD F L+D CK V+ A+ V M + P + +Y L++G+
Sbjct: 166 NKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLV 225
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
K + ++ M G PD+ SY I+IN C K DEA+EL +EM P+ +
Sbjct: 226 KQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTY 285
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI+GL ++S AL+ + RG P TY++++ A C + ++++A ++ +M+
Sbjct: 286 SSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKN 345
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
GI PN TY I++ L ++G+ E+A VF+ + K G V TY ++++ FC D
Sbjct: 346 QGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVK-GHNLNVYTYTVMIQGFCDKGLFD 404
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A+ + +M+ G +P Y +I SL +D+ + A K EM++ L ++L
Sbjct: 405 EALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLI 464
Query: 299 QALRDEGMEETAVVLAQKIDKLR-KTPLV 326
++ G +L +K K TP++
Sbjct: 465 ASIWVTGSSPGNSLLCKKQGKAAYNTPIM 493
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 160/351 (45%), Gaps = 44/351 (12%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+FN+++ +L KS+H + KM+ R P++ + IL+ + Q ++ S V ++
Sbjct: 64 EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKI 123
Query: 72 KDDGFEPDVVSYGIMINA----------HCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
G++P+ ++ +I HC + +AV+LF +M N P + F L
Sbjct: 124 LKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTIL 183
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++G E R+ EA +G +P TYN+++ Y ++N A + + M + G+
Sbjct: 184 VDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGV 243
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP-------------------------- 215
P+ ++Y I+++ K +EA + K M K
Sbjct: 244 SPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALK 303
Query: 216 --------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
G P + TY ++ C N QVD A+ + +MK +G+ P M+ Y+ LI LC
Sbjct: 304 LVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLC 363
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
KL+DA K F+++L G ++ + Q D+G+ + A+ L K++
Sbjct: 364 QSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKME 414
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 106/211 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ ++ LI+ CK + ++ A E+ +M ++ P++ +Y+ L++G +
Sbjct: 238 MAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGK 297
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM D G P++V+Y +++A C + D A+ L +M+ +P+ + +
Sbjct: 298 ISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTI 357
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL +L +A + F +G TY ++ +C ++A ++ +M G
Sbjct: 358 LIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNG 417
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
PN +TY+I++ L K E A + M
Sbjct: 418 CIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 136/312 (43%), Gaps = 34/312 (10%)
Query: 19 TLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
T + V+ A +F+++ ++ P + +L + K+ ++ + ++M+ G +P
Sbjct: 36 TFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 95
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
++V+ I+IN+ C A + ++ KP+ TLI GL ++ +
Sbjct: 96 NLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDK---- 151
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+C ++ DA + ++M I P+ T+ I++ K
Sbjct: 152 ---------------------HCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKE 190
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
GR +EA +V M + G +P V TY ++ + QV+ A I++ M GV P +
Sbjct: 191 GRVKEAKNVLAMMMIQ-GIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQS 249
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
YS LIN C +D+A + +EM I P +S+L L G A+ L +D
Sbjct: 250 YSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKL---VD 306
Query: 319 KLRKTPLVDRGQ 330
++ DRGQ
Sbjct: 307 EMH-----DRGQ 313
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 151/303 (49%), Gaps = 3/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQ 58
M + G + +N L+ LC + A E+ M D PD+ SYT ++ G+ ++
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+L Y EM D G P+VV+Y +I A C A+ D+A+E+ M P+ +
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++++G S + EA+ F + G EP+ TYN+++ C + R +A +M D M K
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P TY +L G E + + M R G P + I++ + +VD
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILICAYAKQGKVD 391
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM ++ +M+ +G+ P Y T+I LC +++DA +YF++M+D + P ++++L
Sbjct: 392 QAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLI 451
Query: 299 QAL 301
+L
Sbjct: 452 HSL 454
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 151/319 (47%), Gaps = 4/319 (1%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL-SMNEV 67
L + LI + C + ++ + K+ F D ++T LL+G K +M+ V
Sbjct: 90 NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIFCTLINGL 125
R M G P+V SY I++ C R EA+EL + M + +C P + T+ING
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
E L +A + + RG P TY++++ A C + ++ A ++ M K G+ PN
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
RTY+ ++H +G+ +EA K+M G EP V TY ++ C N + A +++D
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKM-HSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M RG+ P + Y TL+ + L + M+ GI P +FS L A +G
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 306 MEETAVVLAQKIDKLRKTP 324
+ A+++ K+ + P
Sbjct: 389 KVDQAMLVFSKMRQQGLNP 407
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 128/319 (40%), Gaps = 41/319 (12%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD--DGFEPDVVSYG 84
E A+ VFD++ +R I L + +++ R + D P++ +YG
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 85 IMINAHCSAKRYD-----------------------------------EAVEL-FREMEA 108
I+I + C A R D +A+++ R M
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 109 TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE--PEAPTYNAVVGAYCWSMRI 166
C P+ + L+ GL E R EAL+ G + P+ +Y V+ + +
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+ AY EM GI PN TY ++ L KA ++A V M K G P TY
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV-KNGVMPNCRTYNS 274
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+V +C + Q A+ +M + GV P + Y++L++ LC + +A K F M G
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334
Query: 287 IRPPGQLFSNLKQALRDEG 305
++P + L Q +G
Sbjct: 335 LKPEITTYGTLLQGYATKG 353
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 92/208 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ +N ++ C S + A KM +PD+ +Y L++ +
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ M G +P++ +YG ++ + + E L M P+ ++F
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + ++ +A+ F + +++G P+ TY V+G C S R+ DA R ++M
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ P Y+ ++H L + ++A F
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKDYF 467
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 152/301 (50%), Gaps = 2/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+FG+ ++ N L+DTLCK R V+RA+ F +++ PD S+ L+ GW + +
Sbjct: 221 MDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGS-VPPDESSFNTLVHGWCKARM 279
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +EM++ GF+P V++Y +I A+C K + + EM + C P+ +
Sbjct: 280 MNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTI 339
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ LG R EAL F + + G P+A YN+++ + R+ DA ++D+MR G
Sbjct: 340 VMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTG 399
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P T++ ++ + E A + +M + +P + TY ++++ C + +
Sbjct: 400 VRPTVATFNTLISAACDHSQAENALKMLVKMEEQ-SCKPDIKTYTPLLKLCCKRQWIKVL 458
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M + + P Y+ L+ LC K +C + +EM+ G P + F + +
Sbjct: 459 RFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETFDLVAEK 518
Query: 301 L 301
L
Sbjct: 519 L 519
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 2/278 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
SY +++ G+ K M + +M + G + + ++ A R+ +A++ F +M
Sbjct: 162 SYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKM 221
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ L++ L E+ + A F Q + P+ ++N +V +C + +
Sbjct: 222 DQFGVVKDTTAMNVLLDTLCKERSVKRARGAF-QELRGSVPPDESSFNTLVHGWCKARMM 280
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
N+A MM EM + G P+ TY ++ + Y++ M R G P V TY I
Sbjct: 281 NEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEM-RSKGCPPNVITYTI 339
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
V+ + A+ I+D+++ G P Y++LI L +L+DA +M G
Sbjct: 340 VMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTG 399
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+RP F+ L A D E A+ + K+++ P
Sbjct: 400 VRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKP 437
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + ++ L K+ + A ++FDK++ PD Y L+ G+ L
Sbjct: 329 GCPPNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDA 388
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N V +M+ G P V ++ +I+A C + + A+++ +ME +CKP + L+
Sbjct: 389 NSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLK- 447
Query: 125 LGSEKRLSEALQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +++ + L+F ++ P+ TY +V C + + + ++EM G P
Sbjct: 448 LCCKRQWIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAP 507
Query: 184 NTRTYDIVLHHLIKA 198
T+D+V L KA
Sbjct: 508 KKETFDLVAEKLDKA 522
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 106/250 (42%), Gaps = 5/250 (2%)
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+G+ SY M++ K++D L +M+ S ++ L R ++
Sbjct: 154 EGYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIGGLVSLATMTKVMRRLAGASRWTD 213
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+ F + + G + N ++ C + A E+R + P+ +++ ++H
Sbjct: 214 AIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRG-SVPPDESSFNTLVH 272
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
KA EA + K M G +P+V TY ++ +C I +EM+++G
Sbjct: 273 GWCKARMMNEARDMMKEMEEH-GFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCP 331
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y+ ++++L + +A F ++ G P +++L L G E A +
Sbjct: 332 PNVITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSV 391
Query: 314 AQKIDKLRKT 323
+DK+R T
Sbjct: 392 ---VDKMRMT 398
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 3/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID LCK + A D M + P++ +Y L+ G + + + + M
Sbjct: 228 FSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PDV++Y ++++A C A R DEA+EL M + C P+ F ++I+GL R
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA Q Q R P+ T+N ++ C + A + +EM + P+ T+ ++
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KAG+ E A + M G P V TY ++V C + +++ +EM + G
Sbjct: 406 DGLCKAGQVEAARDILDLMGNL-GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGC 464
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P Y +L+ +LC + DDA + ++ G P ++ L L G E A+
Sbjct: 465 VPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAIT 524
Query: 313 LAQKI 317
+ +++
Sbjct: 525 VLEEM 529
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 153/290 (52%), Gaps = 12/290 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N +I+ LCKS + E+F+++ KR PD+ +Y L++ + +
Sbjct: 72 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGD 131
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--F 118
L ++ M G P+VV+Y ++IN C R DEA EL +EM +C P+I +
Sbjct: 132 LEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 191
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRG---FEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ ++GL + +EA + +S + G P+ T++ ++ C + ++A D+
Sbjct: 192 NSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DD 248
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M G PN TY+ +++ L KA + E A+++ + M K G P V TY ++V FC +
Sbjct: 249 MIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDK-GVTPDVITYSVLVDAFCKAS 307
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+VD A+ + M +RG P + ++++I+ LC D+ +A FQ L +
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA---FQIALQV 354
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 133/264 (50%), Gaps = 1/264 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + FN +ID LCKS A ++ ++ R PD ++ IL+ G + N
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM +PDV+++G +I+ C A + + A ++ M P+ +
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL R+ E +F + G PE+ TY ++V A C + R +DA +++ +++ G
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T TY+I++ L K+G+TE+A +V + M K G +P T+ + +
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK-GHQPDSFTFAACFGGLHRSGNLAGT 557
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN 264
M + + A+G+LP S++++
Sbjct: 558 MELLRVVLAKGMLPDATTCSSILD 581
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 135/293 (46%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ L+D CK+ V+ A E+ M R P++ ++ +++G +
Sbjct: 288 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA 347
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++ + PD V++ I+I C A +++A LF EM A N +P F LI+G
Sbjct: 348 FQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDG 407
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ A G P TYN +V C S RI + ++EM G P
Sbjct: 408 LCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPE 467
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY +++ L +A RT++A + ++ + G +P TY I+V + + + A+ +
Sbjct: 468 SMTYGSLVYALCRASRTDDALQLVSKL-KSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 526
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+EM +G P ++ L L + + +L G+ P S++
Sbjct: 527 EEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSI 579
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 126/280 (45%), Gaps = 15/280 (5%)
Query: 39 RRFDPDIKSYTILLEGWGQQKNLLSMNEVYR-EMKDDGFEPDVVSYGIMINAHCSAKRYD 97
R + Y I+L+ + E++R EM DG P +V+Y +IN C +
Sbjct: 39 RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 98
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ELF E+ P + TLI+ L L EA + G RG P TY+ ++
Sbjct: 99 AGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLI 158
Query: 158 GAYCWSMRINDAYRMMDEM--RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
C RI++A ++ EM + C + PN TY+ L L K T EA + + S +
Sbjct: 159 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR--SLRD 216
Query: 216 GT---EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
G+ P T+ ++ C Q D A D+M A G +P + Y+ L+N LC DK+
Sbjct: 217 GSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKM 274
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQAL-----RDEGME 307
+ A + M+D G+ P +S L A DE +E
Sbjct: 275 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALE 314
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 138/275 (50%), Gaps = 3/275 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD F LI LC++ V+ A E F +M K P++ Y +LL G L N +
Sbjct: 148 PDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTL 207
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ EMK PDVV+Y +++A C A+R +E +LF M A P+ F TLI+GL
Sbjct: 208 FAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCR 267
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
L +AL+ FG + G +P TY ++ C + ++ A + ++M + I P+
Sbjct: 268 TGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVA 327
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y+ ++ K G +EA +++ MS G +PT+ T+ ++ FC ++ A + EM
Sbjct: 328 YNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM 387
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+G+ Y LI L KLD+A + +++M
Sbjct: 388 GTKGLAADSCTYRILIAGLSRATKLDEALEVYKQM 422
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 150/289 (51%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +I +L K E + +V ++M +PD+ ++ +++G+ + N+ EVY+ M
Sbjct: 13 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G++PD VSY I+I+ + DE++++ EM PS + +L+ L +R+
Sbjct: 73 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVD 132
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A F + + G P+ + ++ C + ++ DA +M K G PN Y+++L
Sbjct: 133 HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L +G+ E+A ++F M + P V TY ++ C +V+ ++++ M+A G
Sbjct: 193 HGLCSSGQLEQANTLFAEM-KSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+P + +STLI+ LC +L+ A + F ML+ G +P ++ L L
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 144/293 (49%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ FN ++ +S ++E+A+EV+ M + + PD SY IL+ G + L
Sbjct: 40 GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDES 99
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G P + +Y ++ A A+R D A LF EM P +F LI G
Sbjct: 100 LKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILG 159
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ +A + F Q K G +P P YN ++ C S ++ A + EM+ P+
Sbjct: 160 LCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPD 219
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +L + KA R EE +F+ M R G P V T+ ++ C +++ A+ ++
Sbjct: 220 VVTYNTLLDAVCKARRVEEGCKLFEAM-RAAGYVPNVITFSTLIHGLCRTGELEKALEVF 278
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
M G P + Y+TLI+ LC +K+ A + F++M I P +++L
Sbjct: 279 GSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSL 331
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 147/298 (49%), Gaps = 2/298 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + ++ LI L K ++ + ++ +M R P +++Y+ L+ + +
Sbjct: 71 MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARR 130
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ EM G PD + + +I C A + +A E F++M C+P+ ++
Sbjct: 131 VDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNV 190
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL S +L +A F + K P+ TYN ++ A C + R+ + ++ + MR G
Sbjct: 191 LLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG 250
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T+ ++H L + G E+A VF M + G +P TY ++ C +V A
Sbjct: 251 YVPNVITFSTLIHGLCRTGELEKALEVFGSM-LEAGCKPNKYTYTTLISGLCRAEKVIQA 309
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML-DIGIRPPGQLFSNL 297
++++M + P Y++LI C +D+A K ++EM G++P F+ L
Sbjct: 310 RELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 367
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 144/316 (45%), Gaps = 37/316 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +P +N L+ LC S +E+A +F +MK PD+ +Y LL+ + +
Sbjct: 176 MPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ M+ G+ P+V+++ +I+ C ++A+E+F M CKP+ + + T
Sbjct: 236 VEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 295
Query: 121 LINGLGSEKRLSEALQFFGQ------------------------------------SKKR 144
LI+GL +++ +A + F + S
Sbjct: 296 LISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA 355
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P T+N ++ +C ++ A ++ EM G+ ++ TY I++ L +A + +EA
Sbjct: 356 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEA 415
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
V+K+M K VS V + C +D A +++ + G +P + L
Sbjct: 416 LEVYKQMREKKFLLDPVSCVSFVGGL-CKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 474
Query: 265 SLCHEDKLDDACKYFQ 280
SL +++DA K +
Sbjct: 475 SLIKLGRVEDAQKLME 490
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 138/276 (50%), Gaps = 1/276 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M+ + ++ +Y+ +++ ++ +V EM G PDV ++ ++ +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
++A E+++ M + KP + LI+GL +L E+L+ + RG P Y++
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
+V A + R++ A + DEM + G P+ + ++ L +AG+ ++A FK+M K
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP-KH 179
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G +P V Y +++ C + Q++ A ++ EMK+ P + Y+TL++++C ++++
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
CK F+ M G P FS L L G E A+
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 275
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 106 MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
M N + + ++I L E + E+ + + G P+ +N V+ + S
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
+ A + M + G P+ +Y I++H L K G+ +E+ + M + G P++ Y
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMR-GQTPSMQAYS 119
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+VR +VD A ++DEM G P M+ LI LC K+ DA + F++M
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVL 313
G +P +++ L L G E A L
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTL 207
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + FN LID CK + RA E+ +M + D +Y IL+ G + L
Sbjct: 356 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEA 415
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EVY++M++ F D VS + C D+A +F + P+P F L
Sbjct: 416 LEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSES 475
Query: 125 LGSEKRLSEALQFFGQSKKR 144
L R+ +A + +K R
Sbjct: 476 LIKLGRVEDAQKLMEPAKAR 495
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 161/316 (50%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G++ ++ ++ LI LC A + M +R+ +P++ +++ L++ + ++
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++Y EM +PD+ +Y +IN C R DEA +F M + +C P+ + T
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + +RG TY ++ + + ++A + +M G
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+I+L L K G+ +A VF+ + R EP + TY I++ C +V+
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST-MEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+T+I+ C + ++A ++M + G P ++ L +A
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 301 -LRDEGMEETAVVLAQ 315
LRD E +A ++ +
Sbjct: 583 RLRDGDREASAELIKE 598
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ +L ++ I+ C+ + A V KM K ++PDI + + LL G+ K
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G++PD ++ +I+ + EAV L +M C+P + T
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + AL + +K E + YN ++ C ++DA + EM G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY ++ L GR +A + M + P V T+ ++ F ++ A
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEA 347
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++DEM R + P + YS+LIN C D+LD+A F+ M+ P +S L +
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 301 L-----RDEGME 307
+EGME
Sbjct: 408 FCKAKRVEEGME 419
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 160/358 (44%), Gaps = 34/358 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + ++ + L++ C S+ + A + D+M + + PD ++T L+ G
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +M G +PD+V+YG ++N C D A+ L ++ME + I+ T
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL K + +AL F + +G P+ TY++++ C R +DA R++ +M +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP------------------------- 215
I PN T+ ++ +K G+ EA ++ M ++
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 216 ---------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
P V TY +++ FC +V+ M ++ EM RG++ Y+TLI+
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
D+A F++M+ +G+ P ++ L L G A+V+ + + + P
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID K + A++++D+M KR DPDI +Y+ L+ G+ L ++ M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+VV+Y +I C AKR +E +ELFREM + + TLI+G +
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A F Q G P TYN ++ C + ++ A + + +++ + P+ TY+I++
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAG+ E+ + +F +S K G P V Y ++ FC + A + +MK G
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
LP Y+TLI + + + + + +EM G + L D ++++
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 162/335 (48%), Gaps = 15/335 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M+K ++ ++ +N +ID LCK +H++ A +F +M + PD+ +Y+ L+
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W LLS +M + P+VV++ +I+A + EA +L+ EM + P
Sbjct: 309 WSDASRLLS------DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +LING RL EA F + P TY+ ++ +C + R+ + +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM + G+ NT TY ++H +A + A VFK+M G P + TY I++ C N
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKN 481
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
++ AM +++ ++ + P ++ Y+ +I +C K++D + F + G+ P +
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 295 SNLKQALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
+ + +G +E A L +K+ + PL + G
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKE--DGPLPNSG 574
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 1/289 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ +FN+L+ + K E + ++M+ D+ +Y+I + + ++ L V
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPD+V+ ++N +C +KR +AV L +M KP F TLI+GL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ SEA+ Q +RG +P+ TY VV C I+ A ++ +M K I + Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ L K ++A ++F M K G P V TY ++ C + A R+ +M
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R + P + +S LI++ E KL +A K + EM+ I P +S+L
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 138/292 (47%), Gaps = 5/292 (1%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
NRL D + V+ A ++F M K R P I + LL + + + +M+
Sbjct: 56 NRLSDII----KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G D+ +Y I IN C + A+ + +M +P +L+NG KR+S+
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+ Q + G++P+ T+ ++ + ++A ++D+M + G P+ TY V++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K G + A S+ K+M K E V Y ++ C +D A+ ++ EM +G+
Sbjct: 232 GLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + YS+LI+ LC+ + DA + +M++ I P FS L A EG
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 342
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + +N L+D LCK+ + +A VF+ +++ +PDI +Y I++EG +
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ + G P+V++Y MI+ C +EA L ++M+ P+ + T
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
LI + + + + + GF +A T V
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 109/253 (43%), Gaps = 15/253 (5%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ ++ G P V S+ + + C + + A +RE+ L N L
Sbjct: 14 VHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREI--------------LRNRLS 59
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A+ FG K P +N ++ A + + ++M+ GI +
Sbjct: 60 DIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I ++ + + A +V +M K G EP + T ++ +C++ ++ A+ + D+
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G P ++TLI+ L +K +A +M+ G +P + + L G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 307 EETAVVLAQKIDK 319
+ A+ L +K++K
Sbjct: 239 IDLALSLLKKMEK 251
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 158/320 (49%), Gaps = 4/320 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ + F LI+ LC ++ A E+F++M R P+ ++TIL++ ++
Sbjct: 147 MFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGM 206
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ M + G EP++ +Y ++N +C ++A ++F M C PS H +
Sbjct: 207 VSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSI 266
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING +R+ EA Q ++ P TYN ++ C + + +A + +M G
Sbjct: 267 LINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSG 326
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN RTY I+L L K G EEA + M + EP + Y I+++ ++++A
Sbjct: 327 MLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK-LEPDIVLYNILIQGMFIAGKLEVA 385
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ ++ A G+ P + Y+ +I L E D+A K F++M D G P ++ + Q
Sbjct: 386 KELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQG 445
Query: 301 LRDEGMEETAVVLAQKIDKL 320
TA+ Q ID++
Sbjct: 446 FLQNQDPSTAI---QLIDEM 462
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 160/318 (50%), Gaps = 1/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ N LI++LC+ H+ A V KM K PD ++T L+ G +
Sbjct: 112 MDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGR 171
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ EM P+ V++ I+++ C EA +F M +P+ + +
Sbjct: 172 IKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNA 231
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG +++A + F +G P +Y+ ++ YC S RI++A ++ +M +
Sbjct: 232 LMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKE 291
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT TY+ ++ L A EA +FK+M G P + TY I++ C + ++ A
Sbjct: 292 LIPNTVTYNTLMQGLCHASSLLEAQELFKKMC-SSGMLPNLRTYSILLDGLCKHGHLEEA 350
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M+ R + P + +Y+ LI + KL+ A + F ++ GIRP + ++ + +
Sbjct: 351 LKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKG 410
Query: 301 LRDEGMEETAVVLAQKID 318
L EG+ + A L +K++
Sbjct: 411 LLKEGLSDEAYKLFRKME 428
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 132/271 (48%), Gaps = 1/271 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+D LCK V A+ VF+ M ++ +P+I +Y L+ G+ + + ++V+ M
Sbjct: 194 FTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMV 253
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P V SY I+IN +C ++R DEA L +M P+ + TL+ GL L
Sbjct: 254 GKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLL 313
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + G P TY+ ++ C + +A +++ M++ + P+ Y+I++
Sbjct: 314 EAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILI 373
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ AG+ E A +F ++ G P+V TY I+++ D A +++ +M+ G
Sbjct: 374 QGMFIAGKLEVAKELFSKLFAN-GIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGF 432
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
LP Y+ +I A + EM+
Sbjct: 433 LPDSCSYNVIIQGFLQNQDPSTAIQLIDEMV 463
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 140/327 (42%), Gaps = 36/327 (11%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F +M P L ++K ++ + +M G + + I
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR- 144
+IN+ C AV + +M +P F TLINGL +E R+ EA++ F + R
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186
Query: 145 ----------------------------------GFEPEAPTYNAVVGAYCWSMRINDAY 170
G EP TYNA++ YC + +NDA
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++ + M G P+ +Y I+++ K+ R +EA ++ +MS K P TY +++
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELI-PNTVTYNTLMQG 305
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C+ + + A ++ +M + G+LP + YS L++ LC L++A K M + + P
Sbjct: 306 LCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPD 365
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKI 317
L++ L Q + G E A L K+
Sbjct: 366 IVLYNILIQGMFIAGKLEVAKELFSKL 392
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ L ++ L+D LCK H+E A ++ M++R+ +PDI Y IL++G L
Sbjct: 326 GMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVA 385
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ ++ +G P V +Y IMI DEA +LFR+ME P + +I G
Sbjct: 386 KELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQG 445
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ S A+Q + R F ++ T+ ++
Sbjct: 446 FLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + +N ++ C S VE A + MK+++ +PD +Y L+ G +Q
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++++ EM G P V Y +I+ C+ D A EM P+ + +
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L E+R EA + +++G P+A TYN ++ YC A+ + DEM G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P +TY +LH L K R +EA +FK+++ + G P V + ++ C N+ V A
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE-GVLPDVIMFNALIDGHCSNSNVKGA 485
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ +M V P ++T++ C E K+++A + F EM GI+P F+ L
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + N L+ K E A ++ +M + R + ++ I++ ++
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + M+ G +P++V+Y +++ +CS+ R + A + M+ +P + +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ + RL EA + F + ++G P A YN ++ +C ++ A DEM K G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY+ ++H L RT+EA + K + K G P TY I++ +C A A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK-GISPDAITYNILINGYCRCANAKKA 415
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ DEM A G+ P Y++L++ L ++++ +A F+++ G+ P +F+ L
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDG 475
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
+ A L + +D+++ P
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPP 499
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 144/297 (48%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ +N LID C +++ A D+M K+ P + +Y L+ ++
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEA 380
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +E+++ G PD ++Y I+IN +C +A L EM A+ KP+ + +L++
Sbjct: 381 ECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R+ EA F + G P+ +NA++ +C + + A+ ++ +M + + P+
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPD 500
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ + G+ EEA +F M R+ G +P ++ ++ + + A R+
Sbjct: 501 EVTFNTIMQGHCREGKVEEARELFDEMKRR-GIKPDHISFNTLISGYSRRGDIKDAFRVR 559
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+EM G P + Y+ L+ LC + D A + +EM+ G+ P + L + +
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 1/224 (0%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E + MK+ G P + + +++ R + A L+ EM K S + F +IN L
Sbjct: 172 ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL 231
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
E +L +A F G + G +P TYN +V YC S R+ A ++ M++ I P++
Sbjct: 232 CKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 291
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY ++ + K GR EEA +F+ M +K G P+ Y ++ FC +DMA D
Sbjct: 292 FTYGSLISGMCKQGRLEEASKIFEEMVQK-GLRPSAVIYNTLIDGFCNKGNLDMASAYKD 350
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM +G+ P M Y++LI++L E + D+A +E+ + GI P
Sbjct: 351 EMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP 394
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 54 GWGQQKNLLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
G G ++ + E +D GF+ +V + +I + C R DEA E F M+
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVL 183
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ +L++ R A + + + + T+N ++ C ++ A
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ M G+ PN TY+ ++H +GR E A ++ M R+ EP TY ++ C
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK-IEPDSFTYGSLISGMC 302
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+++ A +I++EM +G+ P +Y+TLI+ C++ LD A Y EML GI P
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362
Query: 293 LFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+++L AL E + A + ++I + +P
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISP 394
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + L+ L K ++ A ++F K+ PD+ + L++G N+
Sbjct: 426 GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGA 485
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ ++M PD V++ ++ HC + +EA ELF EM+ KP F TLI+G
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG 545
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A + + GF P TYNA+V C + + A ++ EM G+ P+
Sbjct: 546 YSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPD 605
Query: 185 TRTYDIVLHHLIKAGRTEE 203
TY ++ + K +E
Sbjct: 606 DTTYFTLIEGIAKVNIPDE 624
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 35/133 (26%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----- 55
MD+ + + FN ++ C+ VE A+E+FD+MK+R PD S+ L+ G+
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGD 551
Query: 56 --------------GQQKNLLSMN----------------EVYREMKDDGFEPDVVSYGI 85
G +L+ N E+ +EM G PD +Y
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611
Query: 86 MINAHCSAKRYDE 98
+I DE
Sbjct: 612 LIEGIAKVNIPDE 624
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 157/304 (51%), Gaps = 2/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G++ + +N LI LC A + M +R+ +P++ +++ L++ + ++
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++Y EM +PD+ +Y +IN C R DEA +F M + +C P+ + T
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + +RG TYN ++ + + A ++ +M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L K G+ E+A VF+ + +K EP + TY I++ C +V+
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + +Y+T+I+ C + ++A F+EM + G P ++ L +A
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 301 -LRD 303
LRD
Sbjct: 580 RLRD 583
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 141/276 (51%), Gaps = 1/276 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +L + +++ LCK ++ A + KM+K + + D+ YT +++ KN+
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM + G P+VV+Y +I C+ R+ +A L +M P+ F LI+
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 334
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + KR +P+ TY++++ +C R+++A M + M PN
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ KA R EE +F+ MS++ TV TY +++ DMA +I+
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYNTLIQGLFQAGDCDMAQKIF 453
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
+M + GV P + YS L++ LC KL+ A F+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + +L +N LI+ C+ + A V KM K ++PDI + + LL G+ K
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M ++P+ V++ +I+ + EAV L M A C+P + T
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + AL + +K E + Y ++ A C +NDA + EM G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ L GR +A + M + P V T+ ++ F ++ A
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEA 344
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++DEM R + P + YS+LIN C D+LD+A F+ M+ P ++ L +
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 301 L-----RDEGME 307
+EGME
Sbjct: 405 FCKAKRVEEGME 416
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID K + A++++D+M KR DPDI +Y+ L+ G+ L ++ M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+VV+Y +I C AKR +E +ELFREM + + TLI GL
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G P+ TY+ ++ C ++ A + + ++K + P+ TY+I++
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAG+ E+ + +F +S K G +P V Y ++ FC + A ++ EMK G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
LP Y+TLI + + + + +EM G S + L D +E++
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 139/289 (48%), Gaps = 1/289 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ +FN+L+ + K + + ++M+ R D+ SY IL+ + ++ L V
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPD+V+ ++N +C KR EAV L +M +P+ F TLI+GL
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ SEA+ + RG +P+ TY VV C I+ A ++ +M K I + Y
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
++ L +A ++F M K G P V TY ++R C + A R+ +M
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R + P + +S LI++ E KL +A K + EM+ I P +S+L
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 154/312 (49%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI L A + D+M R PD+ +Y ++ G ++ ++ + ++M+
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
E DVV Y +I+A C+ K ++A+ LF EM+ +P+ + +LI L + R S
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + +R P T++A++ A+ ++ +A ++ DEM K I P+ TY ++
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ R +EA +F+ M K P V TY +++ FC +V+ M ++ EM RG+
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKD-CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ Y+TLI L D A K F++M+ G+ P +S L L G E A+V
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 486
Query: 313 LAQKIDKLRKTP 324
+ + + K + P
Sbjct: 487 VFEYLQKSKMEP 498
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 1/280 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A ++F +M + R P I + LL + + + M++ D+ SY I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C + A+ + +M +P +L+NG KR+SEA+ Q
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++P T+N ++ + ++A ++D M G P+ TY V++ L K G + A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
S+ K+M K E V Y ++ C V+ A+ ++ EM +G+ P + Y++LI
Sbjct: 241 SLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC+ + DA + +M++ I P FS L A EG
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 40/248 (16%)
Query: 95 RYDEAVELFREMEATNCKPSPHI------------------------------------- 117
+ D+AV+LF EM +P P I
Sbjct: 60 KLDDAVDLFGEM--VQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LIN +L AL G+ K G+EP+ T ++++ YC RI++A ++D+M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
PNT T++ ++H L + EA ++ RM + G +P + TY VV C +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDI 236
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D+A+ + +M+ + + +Y+T+I++LC+ ++DA F EM + GIRP +++L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 298 KQALRDEG 305
+ L + G
Sbjct: 297 IRCLCNYG 304
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 80/153 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ L+D LCK +E+A VF+ ++K + +PDI +Y I++EG + +
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + G +P+V+ Y MI+ C +EA LFREM+ P+ + TLI
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ + + + + + GF +A T + V+
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L +A+ FG+ + P +N ++ A + + + + M+ I + +Y+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I+++ + + A +V +M K G EP + T ++ +C+ ++ A+ + D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKM-MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
P ++TLI+ L +K +A M+ G +P + + L G +
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 310 AVVLAQKIDK 319
A+ L +K++K
Sbjct: 239 ALSLLKKMEK 248
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 157/304 (51%), Gaps = 2/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G++ + +N LI LC A + M +R+ +P++ +++ L++ + ++
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++Y EM +PD+ +Y +IN C R DEA +F M + +C P+ + T
Sbjct: 325 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 384
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + +RG TYN ++ + + A ++ +M G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L K G+ E+A VF+ + +K EP + TY I++ C +V+
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDG 503
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + +Y+T+I+ C + ++A F+EM + G P ++ L +A
Sbjct: 504 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 563
Query: 301 -LRD 303
LRD
Sbjct: 564 RLRD 567
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 141/276 (51%), Gaps = 1/276 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +L + +++ LCK ++ A + KM+K + + D+ YT +++ KN+
Sbjct: 199 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 258
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM + G P+VV+Y +I C+ R+ +A L +M P+ F LI+
Sbjct: 259 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDA 318
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + KR +P+ TY++++ +C R+++A M + M PN
Sbjct: 319 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 378
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ KA R EE +F+ MS++ TV TY +++ DMA +I+
Sbjct: 379 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-TYNTLIQGLFQAGDCDMAQKIF 437
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
+M + GV P + YS L++ LC KL+ A F+
Sbjct: 438 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 473
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 144/312 (46%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + +L +N LI+ C+ + A V KM K ++PDI + + LL G+ K
Sbjct: 90 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 149
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M ++P+ V++ +I+ + EAV L M A C+P + T
Sbjct: 150 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 209
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + AL + +K E + Y ++ A C +NDA + EM G
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ L GR +A + M + P V T+ ++ F ++ A
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEA 328
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--- 297
+++DEM R + P + YS+LIN C D+LD+A F+ M+ P ++ L
Sbjct: 329 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 388
Query: 298 --KQALRDEGME 307
K +EGME
Sbjct: 389 FCKAKRVEEGME 400
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID K + A++++D+M KR DPDI +Y+ L+ G+ L ++ M
Sbjct: 312 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 371
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+VV+Y +I C AKR +E +ELFREM + + TLI GL
Sbjct: 372 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 431
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G P+ TY+ ++ C ++ A + + ++K + P+ TY+I++
Sbjct: 432 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 491
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAG+ E+ + +F +S K G +P V Y ++ FC + A ++ EMK G
Sbjct: 492 EGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 550
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
LP Y+TLI + + + + +EM G S + L D +E++
Sbjct: 551 LPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 607
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 139/289 (48%), Gaps = 1/289 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ +FN+L+ + K + + ++M+ R D+ SY IL+ + ++ L V
Sbjct: 63 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 122
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPD+V+ ++N +C KR EAV L +M +P+ F TLI+GL
Sbjct: 123 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 182
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ SEA+ + RG +P+ TY VV C I+ A ++ +M K I + Y
Sbjct: 183 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 242
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
++ L +A ++F M K G P V TY ++R C + A R+ +M
Sbjct: 243 TTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R + P + +S LI++ E KL +A K + EM+ I P +S+L
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 154/312 (49%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI L A + D+M R PD+ +Y ++ G ++ ++ + ++M+
Sbjct: 172 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 231
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
E DVV Y +I+A C+ K ++A+ LF EM+ +P+ + +LI L + R S
Sbjct: 232 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 291
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + +R P T++A++ A+ ++ +A ++ DEM K I P+ TY ++
Sbjct: 292 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 351
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ R +EA +F+ M K P V TY +++ FC +V+ M ++ EM RG+
Sbjct: 352 NGFCMHDRLDEAKHMFELMISKD-CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ Y+TLI L D A K F++M+ G+ P +S L L G E A+V
Sbjct: 411 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV 470
Query: 313 LAQKIDKLRKTP 324
+ + + K + P
Sbjct: 471 VFEYLQKSKMEP 482
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 1/280 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A ++F +M + R P I + LL + + + M++ D+ SY I
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C + A+ + +M +P +L+NG KR+SEA+ Q
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++P T+N ++ + ++A ++D M G P+ TY V++ L K G + A
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
S+ K+M K E V Y ++ C V+ A+ ++ EM +G+ P + Y++LI
Sbjct: 225 SLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC+ + DA + +M++ I P FS L A EG
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 323
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 40/248 (16%)
Query: 95 RYDEAVELFREMEATNCKPSPHI------------------------------------- 117
+ D+AV+LF EM +P P I
Sbjct: 44 KLDDAVDLFGEM--VQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 101
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LIN +L AL G+ K G+EP+ T ++++ YC RI++A ++D+M
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
PNT T++ ++H L + EA ++ RM + G +P + TY VV C +
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDI 220
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D+A+ + +M+ + + +Y+T+I++LC+ ++DA F EM + GIRP +++L
Sbjct: 221 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280
Query: 298 KQALRDEG 305
+ L + G
Sbjct: 281 IRCLCNYG 288
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 80/153 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ L+D LCK +E+A VF+ ++K + +PDI +Y I++EG + +
Sbjct: 444 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 503
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + G +P+V+ Y MI+ C +EA LFREM+ P+ + TLI
Sbjct: 504 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 563
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ + + + + + GF +A T + V+
Sbjct: 564 RLRDGDKAASAELIKEMRSCGFVGDASTISMVI 596
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L +A+ FG+ + P +N ++ A + + + + M+ I + +Y+
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I+++ + + A +V +M K G EP + T ++ +C+ ++ A+ + D+M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKM-MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 162
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
P ++TLI+ L +K +A M+ G +P + + L G +
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222
Query: 310 AVVLAQKIDK 319
A+ L +K++K
Sbjct: 223 ALSLLKKMEK 232
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 145/275 (52%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+D CK V+ A+ M K+ PDI +Y L++G+ + + M
Sbjct: 283 FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMS 342
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G V SY I+IN C K D+A++LF+EM P+ + +LI+GL R+S
Sbjct: 343 HRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRIS 402
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL+ RG +P+ TY++++ A C + ++ A ++ +++ GI PN TY I++
Sbjct: 403 YALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILI 462
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR E+A ++F+ + K G TV+TY ++++ FC + D A+ + +MK
Sbjct: 463 DGLCKGGRLEDARNIFEDLLVK-GYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSC 521
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+P Y +I SL +D+ D A K +EM+ G+
Sbjct: 522 IPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 1/307 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + + LI+ LCK A E+ ++ + D+ Y+ +++ + KN+
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y EM ++V+Y +I+ C + +A+ LF +M + N P + F L++
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E R+ EA K+G +P+ TYN+++ YC +N A +++ M G+
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTA 348
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
R+Y+IV++ K ++A +FK M K P V TY ++ C + ++ A+ +
Sbjct: 349 TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQ-IFPNVITYNSLIDGLCKSGRISYALEL 407
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
D M RG P + YS+++++LC +D A ++ D GIRP ++ L L
Sbjct: 408 IDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCK 467
Query: 304 EGMEETA 310
G E A
Sbjct: 468 GGRLEDA 474
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +ID++CK ++V A +++ +M RR +I +Y+ L+ G+ L ++ +M
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ PDV ++ I+++A C R EA M KP + +L++G ++
Sbjct: 273 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVN 332
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A RG +YN V+ +C ++ A ++ EM I PN TY+ ++
Sbjct: 333 MAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLI 392
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+GR A + M + G +P + TY ++ C N VD A+ + ++K +G+
Sbjct: 393 DGLCKSGRISYALELIDLMHDR-GQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGI 451
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P M+ Y+ LI+ LC +L+DA F+++L G ++ + Q G+ + A+
Sbjct: 452 RPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALS 511
Query: 313 LAQKI 317
L K+
Sbjct: 512 LLSKM 516
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 17/345 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K +FN LI+ C+ + A V K+ K ++PD + ++G+ +
Sbjct: 96 MEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQ 155
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ GF D VSYG +IN C A+EL R ++ + ++ T
Sbjct: 156 IHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYST 215
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + +K +++A + + R TY+A++ +C ++ DA + ++M
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ T++I++ K GR +EA + M K G +P + TY ++ +C +V+MA
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMM-MKQGIKPDIVTYNSLMDGYCLVNEVNMA 334
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I + M RGV + Y+ +IN C +D A K F+EM I P +++L
Sbjct: 335 KSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDG 394
Query: 301 L----------------RDEGMEETAVVLAQKIDKLRKTPLVDRG 329
L D G + + + +D L K LVD+
Sbjct: 395 LCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKA 439
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 144/315 (45%), Gaps = 1/315 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + + N I C + +A DK+ F D SY L+ G +
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ E+ R + + DVV Y +I++ C K ++A +L+ EM + + + LI
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +L +A+ F + P+ T+N +V A+C R+ +A + M K GI
Sbjct: 253 SGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK 312
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ TY+ ++ A S+ MS + G TV +Y IV+ FC VD AM+
Sbjct: 313 PDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR-GVTATVRSYNIVINGFCKIKMVDQAMK 371
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ EM + + P + Y++LI+ LC ++ A + M D G +P +S++ AL
Sbjct: 372 LFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALC 431
Query: 303 DEGMEETAVVLAQKI 317
+ + A+ L K+
Sbjct: 432 KNHLVDKAIALLIKL 446
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 101/228 (44%), Gaps = 1/228 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + +G ++ + +K Y + LF++ME KP+ F LIN + A
Sbjct: 68 PPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSV 127
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ K G+EP+ T N + +C +I+ A D++ G + +Y +++ L K
Sbjct: 128 LAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCK 187
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G T A + +R+ K + V Y ++ C + V+ A ++ EM +R + +
Sbjct: 188 VGETRAALELLRRVDGKL-VQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIV 246
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
YS LI+ C KL DA F +M I P F+ L A EG
Sbjct: 247 TYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEG 294
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 119/295 (40%), Gaps = 47/295 (15%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
KQ P+ +N LID LCKS + A E+ D M R PDI +Y+ +L+ + +
Sbjct: 379 KQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDK 438
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ ++KD G P++ +Y I+I+ C R ++A +F ++ + + + +I
Sbjct: 439 AIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQ 498
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV-------------------------- 157
G S EAL + K P+A TY ++
Sbjct: 499 GFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLY 558
Query: 158 -----GAYCWSMRINDAYRMMDEMRKCGIGPNT---------RTY-DIVLHHLIKAGRTE 202
G++ S A+ + ++ +C + R Y D VL +
Sbjct: 559 SFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDV 618
Query: 203 EAYSVFKRMS---RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
E SV + K G V+TY ++++ FC + D ++ + +M+ G +P
Sbjct: 619 ECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIP 673
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 166/325 (51%), Gaps = 1/325 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
++ L ++ + LI C++R+++ A VFD+M K DP+ +Y+ L+ G + +
Sbjct: 268 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 327
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ EM + G EP V +Y + I A C+ + +EA+EL M+ C+P+ + LI
Sbjct: 328 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 387
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL +L A+ + + K G P TYNA++ C R + A ++ M G
Sbjct: 388 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL 447
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
NT+TY+ ++ L G E+A +F++M K G PTV TY ++ + V+ A R
Sbjct: 448 ANTQTYNEIIKGLCLGGDIEKAMVLFEKM-LKMGPLPTVVTYNTLINGYLTKGNVNNAAR 506
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D MK G P Y+ L++ KL+ A YFQEM++ G+ P ++ L
Sbjct: 507 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHS 566
Query: 303 DEGMEETAVVLAQKIDKLRKTPLVD 327
+G + A+ L ++++++ P V+
Sbjct: 567 KDGKVDIALSLLERMEEMGCNPNVE 591
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 157/314 (50%), Gaps = 4/314 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G +N +I LC +E+A +F+KM K P + +Y L+ G+ + N
Sbjct: 441 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 500
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + MK++G EPD +Y +++ + + A F+EM P+P + T
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + ++ AL + ++ G P +YNAV+ R ++A ++ D+M + G
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ L + GRT+ A+ +F M ++ P + TY ++ C + D A
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL-PNLYTYSSLIYGLCQEGKADEA 679
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ EM+ +G+ P +++LI+ ++D A + M+D+G +P + +S L +
Sbjct: 680 EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKG 739
Query: 301 LRDEGM---EETAV 311
L+ E + E+ AV
Sbjct: 740 LQKECLLLEEKVAV 753
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 137/309 (44%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L N L+ L K VE A+ ++ +M P + ++ L+ ++ +
Sbjct: 200 GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREA 259
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ PDV +Y +I HC + D A +F M C P+ + TLING
Sbjct: 260 ELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLING 319
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +E R+ EAL + ++G EP TY + A C +A ++ M+K G PN
Sbjct: 320 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 379
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+TY ++ L + G+ E A ++ +M K G P TY ++ C + A++I+
Sbjct: 380 VQTYTALISGLSRLGKLEVAIGLYHKM-LKEGLVPNTVTYNALINELCVGGRFSTALKIF 438
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M+ G L Y+ +I LC ++ A F++ML +G P ++ L +
Sbjct: 439 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 498
Query: 305 GMEETAVVL 313
G A L
Sbjct: 499 GNVNNAARL 507
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 158/355 (44%), Gaps = 36/355 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + + I LC H E A E+ +MKKR P++++YT L+ G + L
Sbjct: 340 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 399
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+Y +M +G P+ V+Y +IN C R+ A+++F ME + + +I G
Sbjct: 400 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKG 459
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD---------- 174
L + +A+ F + K G P TYN ++ Y +N+A R++D
Sbjct: 460 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 519
Query: 175 -------------------------EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
EM +CG+ PN +Y ++ K G+ + A S+ +
Sbjct: 520 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLE 579
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
RM + G P V +Y V+ + A +I D+M +G+LP + Y+TLI+ LC
Sbjct: 580 RM-EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRN 638
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ A K F +M P +S+L L EG + A +L +++++ P
Sbjct: 639 GRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 693
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 12/324 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LID LC++ + A ++F M+KR+ P++ +Y+ L+ G Q+
Sbjct: 616 MAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 675
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EM+ G PD V++ +I+ R D A L R M CKP+ +
Sbjct: 676 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSV 735
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL E L E F P N + + ++ M + G
Sbjct: 736 LLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVS-----------NLLARMSEIG 784
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY ++ L + GR EA + K M + G P Y ++ C N +VD A
Sbjct: 785 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKER-GFCPDREIYYSLLIAHCKNLEVDHA 843
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++I+ ++A+G + +Y LI +LC ++++A F ML+ +++ L
Sbjct: 844 LKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDG 903
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG + + L ++ TP
Sbjct: 904 LLKEGELDLCMKLLHIMESKNFTP 927
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
++ R F P ++++ ++ + + + E+ GF + S ++ +
Sbjct: 161 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEM 220
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+ A L+++M + +PS F TLIN L + ++ EA Q + P+ TY +
Sbjct: 221 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 280
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ +C + ++ A+ + D M K G PN+ TY +++ L GR +EA + + M K
Sbjct: 281 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK- 339
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G EPTV TY + + C + A+ + MK RG P + Y+ LI+ L KL+ A
Sbjct: 340 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 399
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ +ML G+ P ++ L L G TA+
Sbjct: 400 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 435
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 82/183 (44%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
K + E + +M + +P + +Y+ L+ G ++ ++ ++MK+ GF PD
Sbjct: 766 KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 825
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
Y ++ AHC D A+++F +EA + I+ LI L ++ EA F
Sbjct: 826 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 885
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
++ + + + +V ++ +++ M PN +TY I+ L + G++
Sbjct: 886 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKS 945
Query: 202 EEA 204
E+
Sbjct: 946 IES 948
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L + LI LCK+ VE AQ +FD M ++ ++ D +T+L++G ++ L
Sbjct: 854 GFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLC 913
Query: 65 NEVYREMKDDGFEPDVVSYGIM 86
++ M+ F P++ +Y I+
Sbjct: 914 MKLLHIMESKNFTPNIQTYVIL 935
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 147/318 (46%), Gaps = 15/318 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I C S AQ + +M +R+ P++ +Y L+ + ++
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+Y EM G P+ ++Y MI+ C R D A ++F M C P F TLI+G
Sbjct: 343 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
KR+ + ++ + +RG TYN ++ +C +N A + +M G+ P+
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRMFCYN 234
T + +L L G+ ++A +FK M + G EP V TY I++
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+ A +++EM RG++P YS++I+ LC + +LD+A + F M P F
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582
Query: 295 SNL-----KQALRDEGME 307
+ L K D+G+E
Sbjct: 583 NTLINGYCKAGRVDDGLE 600
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 160/318 (50%), Gaps = 6/318 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ F L+ LC V A ++F ++ + PD+ ++T L+ G ++
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGR 197
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFC 119
++ + M ++G +PD ++YG ++ C A+ L R+ME ++ KP+ I+
Sbjct: 198 VVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYS 257
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+GL + R S++ F + + +G P TYN ++G +C S R + A R++ EM +
Sbjct: 258 AIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER 317
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I PN TY+ +++ +K G+ EA ++ M + G P TY ++ FC ++D
Sbjct: 318 KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR-GIIPNTITYNSMIDGFCKQDRLDA 376
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ M +G P + ++TLI+ C ++DD + EM G+ ++ L
Sbjct: 377 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 436
Query: 300 ALRDEGMEETAVVLAQKI 317
G A+ L+Q++
Sbjct: 437 GFCLVGDLNAALDLSQQM 454
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 141/282 (50%), Gaps = 12/282 (4%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DFN+L+ + + + ++ KM++++ DI S+TIL++ + L + ++
Sbjct: 83 DFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 142
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G PDVV++ +++ C R EA++LF ++ C+P F TL+NGL E R+
Sbjct: 143 TKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRV 198
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK----CGIGPNTRT 187
EA+ + + G +P+ TY V C ++ D ++ +RK I PN
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMC---KMGDTVSALNLLRKMEEISHIKPNVVI 255
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ L K GR +++++F M K G P + TY ++ FC + + A R+ EM
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDK-GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
R + P + Y+ LIN+ E K +A + + EML GI P
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 150/318 (47%), Gaps = 12/318 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID CK ++ A+++F M + PD+ ++T L++G+ K + E+ EM
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + V+Y +I+ C + A++L ++M ++ P TL++GL +L
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480
Query: 133 EALQFFGQSKK-----------RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+AL+ F +K G EP+ TYN ++ + +A + +EM GI
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+T TY ++ L K R +EA +F M K + P V T+ ++ +C +VD +
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS-PNVVTFNTLINGYCKAGRVDDGL 599
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ EM RG++ +Y TLI ++ A FQEM+ G+ P N+
Sbjct: 600 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659
Query: 302 RDEGMEETAVVLAQKIDK 319
+ E AV + + + +
Sbjct: 660 WSKEELERAVAMLEDLQR 677
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 131/282 (46%), Gaps = 4/282 (1%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ +E A ++F M + R P + + L+ + + + +Y++M+ D+ S+
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+I CS + A+ F ++ P F TL++GL + R+SEAL F Q +
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P+ T+ ++ C R+ +A ++D M + G+ P+ TY + + K G T
Sbjct: 180 ----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++ ++M +P V Y ++ C + + + ++ EM+ +G+ P + Y+ +I
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C + A + QEML+ I P ++ L A EG
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEG 337
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 135/289 (46%), Gaps = 12/289 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ F LID C ++ ++ E+ +M +R + +Y L+ G+ +L +
Sbjct: 388 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-----------NCKP 113
++ ++M G PD+V+ +++ C + +A+E+F+ M+ + +P
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEP 507
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ LI GL +E + EA + + + RG P+ TY++++ C R+++A +M
Sbjct: 508 DVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
M PN T++ +++ KAGR ++ +F M R+ G Y ++ F
Sbjct: 568 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRR-GIVADAIIYITLIYGFRK 626
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ A+ I+ EM + GV P ++ +++L+ A +++
Sbjct: 627 VGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-----------PDIKSYTILLE 53
G+ ++ N L+D LC + ++ A E+F M+K + D PD+ +Y IL+
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517
Query: 54 GWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
G + L E+Y EM G PD ++Y MI+ C R DEA ++F M + + P
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ F TLING R+ + L+ F + +RG +A Y ++ + IN A +
Sbjct: 578 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIF 637
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
EM G+ P+T T +L E A ++ + + R
Sbjct: 638 QEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 67/145 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ +ID LCK ++ A ++F M + F P++ ++ L+ G+ + +
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ EM G D + Y +I + A+++F+EM ++ P ++ G
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPE 149
S++ L A+ ++ E E
Sbjct: 659 FWSKEELERAVAMLEDLQRYQLEDE 683
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
K L +A+ F + P +N ++GA R + + +M + I + ++
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
I++ + A S F +++ K G P V T+ ++ C + +V A+ ++ ++
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLT-KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC 178
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
VL ++TL+N LC E ++ +A M++ G++P + + G
Sbjct: 179 RPDVLT----FTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234
Query: 309 TAVVLAQKIDKL 320
+A+ L +K++++
Sbjct: 235 SALNLLRKMEEI 246
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 148/304 (48%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K +K E +N LI C ++ A D+M +R + +Y +L+
Sbjct: 135 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 194
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM G PDV +Y I+IN HC +A+E+F M + + + +
Sbjct: 195 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 254
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + ++ E + F ++ +RG P+ YNA++ ++ S I+ A+ +M EM K
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 314
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ ++ L GR +EA + M+++ G +P + TY ++ + V A
Sbjct: 315 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR-GIQPDLVTYNTLISGYSMKGDVKDA 373
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+RI +EM +G P + Y+ LI LC + DDA +EM++ GI P + +L +
Sbjct: 374 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 433
Query: 301 LRDE 304
L E
Sbjct: 434 LTTE 437
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 7/298 (2%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A +F M + R ++ I+L E+ R+M P+ V+Y +I
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIA 80
Query: 89 AHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG-F 146
CS R A+++ REM E P+ + + T+I+G R+ EA++ F + +G
Sbjct: 81 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+PEA YNA++G YC +++ A D M + G+ TY++++H L GR EAY
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ + M K G P V TY I++ C V A+ I++ M RGV + Y++LI +L
Sbjct: 201 LVEEMGGK-GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYAL 259
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ ++ + K F E + GIRP L++ L + G + A + +++K R P
Sbjct: 260 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 317
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 3/272 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+ L A E+ ++M + PD+ +Y IL+ G ++ N+
Sbjct: 174 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 233
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G VV+Y +I A + E +LF E +P ++ LIN
Sbjct: 234 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 293
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + A + G+ +K+ P+ TYN ++ C R+++A +++DEM K GI P+
Sbjct: 294 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD 353
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ G ++A + M K G PT+ TY +++ C N Q D A +
Sbjct: 354 LVTYNTLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMV 412
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK--LDD 274
EM G+ P Y +LI L ED+ +DD
Sbjct: 413 KEMVENGITPDDSTYISLIEGLTTEDERAIDD 444
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 161/313 (51%), Gaps = 4/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
FN +I LC+ + +A +V +K P + +Y L++G+ G N+ ++ + +
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK 253
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM + G P V++G++IN +C AV +F EM+ S + +LI+GL SE
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ E ++ + + G P T+ V+ +C + DA +D M + + P+ Y+
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I++ + G+ E+A +V + M++K G P V+TY ++ F + A + DEMK
Sbjct: 374 ILIDVYRRLGKMEDAMAVKEAMAKK-GISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G+ + Y+ LI +LC + ++ A K EM ++G+ P ++ + Q D+G ++
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492
Query: 310 AVVLAQKIDKLRK 322
A + +++K RK
Sbjct: 493 AYEIRTRMEKCRK 505
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 39/343 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCK---SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+ +GL + +N LID CK + ++ + +M + P ++ +L+ G+ +
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
N + V+ EMK G VV+Y +I+ CS + +E V+L EME P+
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
F ++ G + +++A + +R EP+ YN ++ Y ++ DA + + M
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA 396
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K GI PN TY+ ++ ++G A + M K G E V TY +++ C +V
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK-GIEADVVTYNVLIGALCCKGEV 455
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHE---------------------------- 269
A+++ DEM G+ P Y+T+I C +
Sbjct: 456 RKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVF 515
Query: 270 -------DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
K+D+A EMLD + P G + +K+ + ++G
Sbjct: 516 IKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
+PS L+ GL KR+ A + F + +R P+ T+N V+ C ++ A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV---FKRMSRKPGTEPTVSTYEIVV 228
+ +++ G+ P+ TY+ ++ K G Y V K M + G PT T+ +++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV-EAGISPTAVTFGVLI 271
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+C N+ A+R+++EMK +G+ + Y++LI+ LC E K+++ K +EM D+G+
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 289 PPGQLFSNLKQALRDEGM 306
P F + + +GM
Sbjct: 332 PNEITFGCVLKGFCKKGM 349
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 4/252 (1%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P S ++ AKR D A + FR P + F T+I+GL +L +A
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR---MMDEMRKCGIGPNTRTYDIVLHH 194
K G P TYN+++ YC + Y ++ EM + GI P T+ ++++
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K T A VF+ M ++ G +V TY ++ C +V+ +++ +EM+ G+ P
Sbjct: 274 YCKNSNTAAAVRVFEEM-KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ ++ C + + DA + M + + P +++ L R G E A+ +
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392
Query: 315 QKIDKLRKTPLV 326
+ + K +P V
Sbjct: 393 EAMAKKGISPNV 404
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 95/191 (49%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID + +E A V + M K+ P++ +Y L+ G+ + + S + + EMK
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G E DVV+Y ++I A C +AV+L EM +P+ + T+I G + +
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + +K TYN + +C ++++A +++EM + PN TY+ +
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIK 551
Query: 193 HHLIKAGRTEE 203
+++ G T +
Sbjct: 552 EGMMEKGYTPD 562
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 161/313 (51%), Gaps = 4/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
FN +I LC+ + +A +V +K P + +Y L++G+ G N+ ++ + +
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK 253
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM + G P V++G++IN +C AV +F EM+ S + +LI+GL SE
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ E ++ + + G P T+ V+ +C + DA +D M + + P+ Y+
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I++ + G+ E+A +V + M++K G P V+TY ++ F + A + DEMK
Sbjct: 374 ILIDVYRRLGKMEDAMAVKEAMAKK-GISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G+ + Y+ LI +LC + ++ A K EM ++G+ P ++ + Q D+G ++
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492
Query: 310 AVVLAQKIDKLRK 322
A + +++K RK
Sbjct: 493 AYEIRTRMEKCRK 505
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 148/343 (43%), Gaps = 39/343 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCK---SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+ +GL + +N LID CK + ++ + +M + P ++ +L+ G+ +
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
N + V+ EMK G VV+Y +I+ CS + +E V+L EME P+
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
F ++ G + +++A + +R EP+ YN ++ Y ++ DA + + M
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA 396
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K GI PN TY+ ++ ++G A + M K G E V TY +++ C +V
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK-GIEADVVTYNVLIGALCCKGEV 455
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHE---------------------------- 269
A+++ DEM G+ P Y+T+I C +
Sbjct: 456 RKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVF 515
Query: 270 -------DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
K+D+A EMLD + P G + +K+ + ++G
Sbjct: 516 IKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
+PS L+ GL KR+ A + F + +R P+ T+N V+ C ++ A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV---FKRMSRKPGTEPTVSTYEIVV 228
+ +++ G+ P+ TY+ ++ K G Y V K M + G PT T+ +++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV-EAGISPTAVTFGVLI 271
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+C N+ A+R+++EMK +G+ + Y++LI+ LC E K+++ K +EM D+G+
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 289 PPGQLFSNLKQALRDEGM 306
P F + + +GM
Sbjct: 332 PNEITFGCVLKGFCKKGM 349
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 4/252 (1%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P S ++ AKR D A + FR P + F T+I+GL +L +A
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR---MMDEMRKCGIGPNTRTYDIVLHH 194
K G P TYN+++ YC + Y ++ EM + GI P T+ ++++
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K T A VF+ M ++ G +V TY ++ C +V+ +++ +EM+ G+ P
Sbjct: 274 YCKNSNTAAAVRVFEEM-KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ ++ C + + DA + M + + P +++ L R G E A+ +
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392
Query: 315 QKIDKLRKTPLV 326
+ + K +P V
Sbjct: 393 EAMAKKGISPNV 404
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 95/191 (49%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID + +E A V + M K+ P++ +Y L+ G+ + + S + + EMK
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G E DVV+Y ++I A C +AV+L EM +P+ + T+I G + +
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + +K TYN + +C ++++A +++EM + PN TY+ +
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIK 551
Query: 193 HHLIKAGRTEE 203
+++ G T +
Sbjct: 552 EGMMEKGYTPD 562
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 141/271 (52%), Gaps = 1/271 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID LCK V++A V M K+ +P++ +YT L++G+ K + V+ +
Sbjct: 267 FNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTIS 326
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V SY +MIN C K DEAV+LF+EM N P+ + +LI+GL R+S
Sbjct: 327 LRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRIS 386
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + RG TYN+++ C + +++ A ++ +M+ GI P+ TY ++
Sbjct: 387 DVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLV 446
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR ++A +++ + K G + Y +++ C D A+ + +M+ G
Sbjct: 447 DGLCKNGRLKDAQRIYQDLLCK-GYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGC 505
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+P Y TLI++L +K A K +EM+
Sbjct: 506 MPDAVTYETLISALFKNNKNGKAVKLLREMI 536
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI C ++ A + ++M +P++ ++ IL++G ++ + V M
Sbjct: 232 FNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMI 291
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP+VV+Y +++ + K ++A +F + P+ H + +INGL K +
Sbjct: 292 KQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVD 351
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ F + + P TY++++ C S RI+D + ++DE+ G N TY+ +L
Sbjct: 352 EAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLL 411
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K + ++A ++ +M + G +P +STY +V C N ++ A RI+ ++ +G
Sbjct: 412 NGLCKNHQVDKAIALLTKM-KDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGY 470
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ MY+ +IN LC E D+A +M D G P + L AL AV
Sbjct: 471 PLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVK 530
Query: 313 LAQKI 317
L +++
Sbjct: 531 LLREM 535
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 160/351 (45%), Gaps = 37/351 (10%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRF-DPDIKSYTILLEGWGQQKNL 61
+F L Q + LI+ LCKS A ++ K++ PD+ YT +++ + + K +
Sbjct: 153 RFHLDQ--VSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLV 210
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ ++Y EM P+VV++ +I C + EAV L EM N P+ + F L
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL E + +A K+G EP TY +++ Y +N A + + + G+
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS------------------- 222
PN +Y ++++ L K +EA +FK M K T TV+
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390
Query: 223 ---------------TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
TY ++ C N QVD A+ + +MK G+ P M Y+TL++ LC
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+L DA + +Q++L G ++++ + L EG + A+ L +++
Sbjct: 451 KNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQME 501
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 153/310 (49%), Gaps = 10/310 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M+ G++ E+ FN LI+ + A + K+ K + PD + LL G G+
Sbjct: 79 MELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGK 138
Query: 58 QKNLLSMNE-VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSP 115
K L+ ++ V R+ F D VSYG +IN C + A++L R++E +P
Sbjct: 139 VKEALNFHDHVIRKR----FHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDV 194
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
++ +I+ +K + +A + + + P T+N+++ +C ++ +A +++E
Sbjct: 195 IMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNE 254
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M + PN T++I++ L K G ++A SV M K G EP V TY ++ +
Sbjct: 255 MSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMI-KQGVEPNVVTYTSLMDGYFLVK 313
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+V+ A +++ + RGV P +H YS +IN LC +D+A K F+EM + P +S
Sbjct: 314 EVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYS 373
Query: 296 NLKQALRDEG 305
+L L G
Sbjct: 374 SLIDGLCKSG 383
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ + + L+D + V +A+ VF+ + R P++ SY++++ G + K
Sbjct: 290 MIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKM 349
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++EM P+ V+Y +I+ C + R + +L E+ + + +
Sbjct: 350 VDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNS 409
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL ++ +A+ + K G +P+ TY +V C + R+ DA R+ ++ G
Sbjct: 410 LLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKG 469
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N R Y ++++ L K G +EA S+ +M G P TYE ++ N + A
Sbjct: 470 YPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDN-GCMPDAVTYETLISALFKNNKNGKA 528
Query: 241 MRIWDEMKAR 250
+++ EM AR
Sbjct: 529 VKLLREMIAR 538
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 98/228 (42%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + + ++++ + A+ ++ME +P F LIN +L+ A
Sbjct: 51 PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ K G++P+ T N ++ C + ++ +A D + + + +Y +++ L K
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
+G T A + +++ P V Y ++ FC + V A ++ EM + + P +
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+++LI C +L +A EM + P F+ L L EG
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEG 278
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 7/225 (3%)
Query: 97 DEAVELFRE-MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
D+AV F + N P F +++ L A+ F Q + +G +PE T+N
Sbjct: 34 DDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNI 93
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ + ++N A+ M+ ++ K G P+T T + +L L G+ +EA + + RK
Sbjct: 94 LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL---PVMHMYSTLINSLCHEDKL 272
VS Y ++ C + + A+++ K G+L P + MY+ +I+S C + +
Sbjct: 154 FHLDQVS-YGTLINGLCKSGETRAALQLLR--KIEGLLLVRPDVIMYTAIIDSFCKDKLV 210
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
DA + EM+ I P F++L G + AV L ++
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEM 255
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 162/320 (50%), Gaps = 9/320 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N L+ LC R + A VF++M+ P++++Y+ L++G+ + +
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +EV+ M G P+VV+Y M++ C +++A L M+ NC P+ F T
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I GL R+ A++ F Q G P TYN ++ + R +A+ ++ +M G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I N TY+ +++ AG EA + +M + GT+P T IV+ +C +V++A
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVR-GTKPDAITVNIVIDAYCKQGKVNIA 580
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG--------Q 292
+++ D + A P + Y++LI+ +C +++A Y + ML GI P
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRH 640
Query: 293 LFSNLKQALRDEGMEETAVV 312
LFSN+ + + ++ ++++
Sbjct: 641 LFSNMGHSGAVQFLDASSIM 660
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 6/293 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F +I + ++ E+A + F +M+ R P +K Y +L+ + +N +Y MK
Sbjct: 114 FISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMK 173
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG EP+V +Y I++ A C R D A +L EM + C P + TLI+ L ++
Sbjct: 174 KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVK 233
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F P P YNA++ C +A++++DEM GI PN +Y ++
Sbjct: 234 EAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTII 288
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L AG E + +V +M + G P + T+ +++ F A+ WD M GV
Sbjct: 289 NALSDAGNVELSLAVLAKMFAR-GCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P + Y+ L++ LC + L DA F +M G P + +S L G
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 149/331 (45%), Gaps = 31/331 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLE-----GW 55
M K G++ + +N L+ LCK+ V+ A ++ +M + DPD SYT L+ G
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231
Query: 56 GQQKNLLSMN-------------------------EVYREMKDDGFEPDVVSYGIMINAH 90
++ L+M+ ++ EM + G +P+V+SY +INA
Sbjct: 232 VKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
A + ++ + +M A C P+ H F +LI G + EAL F+ + + G P
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNV 351
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
YNA++ C + DA + ++M G PN RTY ++ KAG + A V+
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M G P V Y +V + C N+ + A + + M+ P ++T I LC
Sbjct: 412 MITH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++D A K F +M + G P ++ L +L
Sbjct: 471 RVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 6/317 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M F +K + +N ++D L + ++ MKK +P++ +Y ILL+ +
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G +PD VSY +I++ C + EA EL A + PS ++
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNA 251
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING+ E EA Q + +G +P +Y ++ A + + + ++ +M G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T+ ++ G + EA + RM R+ G P V Y ++ C + A
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE-GVVPNVVAYNALMHGLCSKRSLGDA 370
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++++M+ G P + YS LI+ LD A + + M+ G P ++ +
Sbjct: 371 VSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV 430
Query: 301 LRDEGMEETAVVLAQKI 317
L M A L + +
Sbjct: 431 LCRNSMFNQAYCLIENM 447
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 144/320 (45%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + +I+ L + +VE + V KM R P++ ++T L++G+ +
Sbjct: 276 GIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEA 335
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G P+VV+Y +++ CS + +AV +F +ME C P+ + LI+G
Sbjct: 336 LDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A + + G P Y +V C + N AY +++ M+ PN
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T T++ + L +GR + A VF +M G P +TY ++ + + A +
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNS-GCFPNTTTYNELLDSLLKDRRFGEAFGLV 514
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M+ RG+ + Y+T+I C L +A + +M+ G +P + + A +
Sbjct: 515 KDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G A+ L ++ + P
Sbjct: 575 GKVNIAIQLMDRLSAGKWHP 594
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 137/298 (45%), Gaps = 10/298 (3%)
Query: 18 DTLCKSRH---VERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
D L + +H + A E F + + F +Y +++E ++ + + + ++MK
Sbjct: 45 DVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKL 104
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+G + +I ++ A ++A++ F M+ KP+ I+ +++ L E R
Sbjct: 105 EGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQM 164
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ KK G EP TYN ++ A C + R++ A++++ EM G P+ +Y ++
Sbjct: 165 INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K G+ +EA + + P+V Y ++ C + A ++ DEM +G+
Sbjct: 225 SLCKLGKVKEARELAMSFT------PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+T+IN+L ++ + +M G P F++L + +G A+
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 164/348 (47%), Gaps = 36/348 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ LI+ CK R + A++V +M++R + +Y +L+ G + +
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++M+D G PD +YG +IN C ++R +EA L EM KP+ ++ LI+G
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 358
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC----------------------- 161
E EA + + G +P TY+ +V C
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 418
Query: 162 ---WSMRI---------NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+++ I DA+R++ EM GI PN TY I++H L ++G E+A + +
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M+ K G +P Y ++ +C V +A I+D+M VLP ++ Y++LI L
Sbjct: 479 EMTTK-GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 537
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+++++ KYF +M + G+ P +S L G E+A L Q++
Sbjct: 538 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 146/344 (42%), Gaps = 36/344 (10%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+DT KS V+ A EV M+ R P I+ LL+ + + + +V M G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PDV +Y +I A+C + +D A ++ EM C + + LI GL + EA
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + G P+ TY A++ C S R N+A ++DEM + PN Y ++
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM---------------- 239
++ G +EA+ + K M G +P TY+ +VR C Q+D
Sbjct: 360 MREGNADEAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 418
Query: 240 -------------------AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
A R+ EM+ G+ P ++ YS +I+ LC + + A +
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM G++P +++ L EG A + K+ K+ P
Sbjct: 479 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 522
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 149/359 (41%), Gaps = 36/359 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----- 55
M+ +GL + + LI+ LCKSR A+ + D+M P++ Y L++G+
Sbjct: 305 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 364
Query: 56 --------------GQQKNLLSMNEVYR----------------EMKDDGFEPDVVSYGI 85
G Q N ++ + + R +M D PD ++Y +
Sbjct: 365 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 424
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I H +A L EME P+ + + +I+GL +A + +G
Sbjct: 425 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 484
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P A Y ++ YC ++ A + D+M K + P+ Y+ ++ L K GR EE+
Sbjct: 485 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 544
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
F +M + G P TY ++ + N ++ A ++ M G+ P +Y L+ S
Sbjct: 545 KYFAQMQER-GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 603
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
D ++ F+ MLD G+ +++ L L G E A + I+K P
Sbjct: 604 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP 662
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 151/367 (41%), Gaps = 71/367 (19%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ L+ LCK ++RA + +M + PD +Y +++EG + +
Sbjct: 375 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 434
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS------ 114
+ EM++ G P+V +Y IMI+ C + ++A +L EM KP+
Sbjct: 435 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 494
Query: 115 ---------------------------PHIFC--TLINGLGSEKRLSEALQFFGQSKKRG 145
P ++C +LI GL R+ E+ ++F Q ++RG
Sbjct: 495 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 554
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN--------------------- 184
P TY+ ++ Y + + A +++ M G+ PN
Sbjct: 555 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 614
Query: 185 --------------TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
R Y I++H+L +G E A+ V + K G+ P V Y ++
Sbjct: 615 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI-EKNGSVPDVHVYSSLISG 673
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C A + A I DEM +GV P + Y+ LI+ LC + A F +L G+ P
Sbjct: 674 LCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPN 733
Query: 291 GQLFSNL 297
+++L
Sbjct: 734 CVTYTSL 740
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 142/317 (44%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + LI C+ +V A E+FDKM K PD+ Y L+ G +
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 539
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +M++ G P+ +Y +I+ + + A +L + M T KP+ I+
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ + + F +G + Y ++ S + A+R++ + K G
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 659
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y ++ L K E+A+ + MS+K G +P + Y ++ C + + A
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKK-GVDPNIVCYNALIDGLCKSGDISYA 718
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ + A+G++P Y++LI+ C + +A + EML GI P ++S L
Sbjct: 719 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 778
Query: 301 LRDEGMEETAVVLAQKI 317
G E A+ L +++
Sbjct: 779 CSSAGDLEQAMFLIEEM 795
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 143/316 (45%), Gaps = 6/316 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
DK LPD +N LI L K VE + + F +M++R P+ +Y+ L+ G+ +
Sbjct: 513 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 572
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+L S ++ + M D G +P+ V Y ++ ++ + ++ F+ M I+
Sbjct: 573 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIY 632
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LI+ L S + A + +K G P+ Y++++ C + A+ ++DEM K
Sbjct: 633 GILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSK 692
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ PN Y+ ++ L K+G A +VF + K G P TY ++ C +
Sbjct: 693 KGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK-GLVPNCVTYTSLIDGSCKVGDIS 751
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +++EM A G+ P +YS L L+ A +EM G F+NL
Sbjct: 752 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLV 810
Query: 299 QALRDEG-MEETAVVL 313
G M+ET +L
Sbjct: 811 DGFCKRGKMQETLKLL 826
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 136/306 (44%), Gaps = 18/306 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K G ++ ++ LI LCK+ E+A + D+M K+ DP+I Y L++G + +
Sbjct: 655 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 714
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ + G P+ V+Y +I+ C A L+ EM AT P ++
Sbjct: 715 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 774
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L G S L +A+ + RG ++N +V +C ++ + +++ + G
Sbjct: 775 LTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 833
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT-----------------VST 223
+ PN T + ++ L +AG+ E +++F + +K +
Sbjct: 834 LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV 893
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+ ++R C +D A+ + D + A+ Y ++++LC + KL +A +EM
Sbjct: 894 VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMD 953
Query: 284 DIGIRP 289
GI P
Sbjct: 954 KRGICP 959
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 131/305 (42%), Gaps = 2/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ LI K+ +E A+++ +M P+ Y LLE + + +
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 609
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ ++ M D G D YGI+I+ S+ + A + +E P H++ +
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL +A + K+G +P YNA++ C S I+ A + + + G
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ K G A+ ++ M G P Y ++ ++ A
Sbjct: 730 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEM-LATGITPDAFVYSVLTTGCSSAGDLEQA 788
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + +EM RG + ++ L++ C K+ + K ++ G+ P N+
Sbjct: 789 MFLIEEMFLRGHASI-SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISG 847
Query: 301 LRDEG 305
L + G
Sbjct: 848 LSEAG 852
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 2/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + L+++ KS +E+ F M + D + Y IL+ N+ +
Sbjct: 589 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 648
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V ++ +G PDV Y +I+ C ++A + EM P+ + LI+G
Sbjct: 649 FRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 708
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +S A F +G P TY +++ C I++A+ + +EM GI P+
Sbjct: 709 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 768
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ AG E+A + + M + ++S++ +V FC ++ +++
Sbjct: 769 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLR--GHASISSFNNLVDGFCKRGKMQETLKLL 826
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ RG++P +I+ L KL + F E+ + FS+L + ++
Sbjct: 827 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 886
Query: 305 G 305
G
Sbjct: 887 G 887
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 140/288 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ FN ++D LCK + + A VF + +R P++ +Y+ L++G +
Sbjct: 499 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 558
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M + G + V+Y +++ R ++AV + R+M C P + T
Sbjct: 559 MDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 618
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +RL EA+ + + GF P TY + C S R ++A ++D M G
Sbjct: 619 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ L KAGR EA F++M+R P V Y ++ C ++D A
Sbjct: 679 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEA 738
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+ M G +P + +S LIN LC ++D + F M + G +
Sbjct: 739 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCK 786
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 155/305 (50%), Gaps = 2/305 (0%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L +N L+ L KS V A + + M + PD+ ++ +L+G +++ +L + V++
Sbjct: 473 LVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFK 532
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+ G P+VV+Y +I+ + DEA++L +M C+ + + T+++GL
Sbjct: 533 RALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVG 592
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R+ +A+ Q + G P+A TYN ++ + R+ +A ++ EM + G P+ TY
Sbjct: 593 RMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYT 652
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-K 248
+ H L ++GR +EA + M+ + G P TY +V C +V A+ +++M +
Sbjct: 653 TLCHGLCRSGRFDEAVEILDYMAAR-GCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
V P + YS LI+ LC ++D+A ++ + M+ G P FS L L D G +
Sbjct: 712 DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRID 771
Query: 309 TAVVL 313
T + L
Sbjct: 772 TGLEL 776
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 161/375 (42%), Gaps = 46/375 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + L LC+S + A E+ D M R P+ +Y+ +++G +
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698
Query: 61 LLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + +M +D+ P V++Y +I+ C A R DEA E M P F
Sbjct: 699 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFS 758
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGL R+ L+ F +RG + + YNA++ AYC + AY +++EM+
Sbjct: 759 ILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTH 818
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-------------------SRKP----- 215
GI NT T+ IV+ L R +EA S F + SR+
Sbjct: 819 GIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALE 878
Query: 216 --------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
G P Y V+ ++A ++ EM++RG P + Y+ +I+ L
Sbjct: 879 LLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLS 938
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-------------LRDEGMEETAVVLA 314
+L AC YF+EML ++P ++S+L A LR G+E T + +
Sbjct: 939 KAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRSSGIEPTITMYS 998
Query: 315 QKIDKLRKTPLVDRG 329
+D L K D+
Sbjct: 999 TMVDSLCKNRGTDKA 1013
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 150/317 (47%), Gaps = 6/317 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ F+ LI+ LC + ++ E+F M +R DI +Y ++ + +
Sbjct: 745 MIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGE 804
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EMK G + V++GI+I A C R DEAV F + +C+ + T
Sbjct: 805 FSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIP-EDCRDEIS-YNT 862
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + +R +AL+ G P+A Y V+ + A +++ EMR G
Sbjct: 863 LITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRG 922
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ RTY I++ L KA + A F+ M RK +P Y ++ FC +VD A
Sbjct: 923 HSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRK-NLKPDAIVYSSLIDAFCKADKVDDA 981
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
W +++ G+ P + MYST+++SLC D A + +EM P ++++L A
Sbjct: 982 ---WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATA 1038
Query: 301 LRDEGMEETAVVLAQKI 317
EG + AV L +
Sbjct: 1039 YVAEGRVDEAVKLVNDL 1055
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 7/282 (2%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + +N ++D L K+ +E A V + + P + ++TI ++G + NL
Sbjct: 170 IGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTG 229
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E + M G P+ V+Y +I+ C A + D A+ L R+ N + F +L++
Sbjct: 230 AYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLH 286
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL RL EA+Q K P +N+++ C + R+++A+ + D M++ G
Sbjct: 287 GLCQAHRLEEAIQLL---KAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSA 343
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY+I+L L K R EAY + M R G P V T+ +++ C +V+ A +
Sbjct: 344 DVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEV 403
Query: 244 WDEMKA-RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ M A G+ P Y+ L+ LC + F++ML+
Sbjct: 404 YERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLE 445
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 150/331 (45%), Gaps = 23/331 (6%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFD---------------------PDIKSYTILLEG 54
L++ LCK+ R ++ F++M +R + P + +Y L+ G
Sbjct: 423 LLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTG 482
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ + + M + G PDV+++ +++ C +R +A +F+ C+P+
Sbjct: 483 LSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPN 542
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ TLI+GL ++ EALQ + + G TY+ VV R+ DA ++
Sbjct: 543 VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 602
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
+MR G P+ TY+ ++ K R EA + + M + G P+V TY + C +
Sbjct: 603 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM-LEAGFHPSVVTYTTLCHGLCRS 661
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML-DIGIRPPGQL 293
+ D A+ I D M ARG P YS++++ LC ++ +A YF++M D + P
Sbjct: 662 GRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIA 721
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+S L L G + A +++ + + P
Sbjct: 722 YSALIDGLCKAGRIDEAYEFLERMIRAGRIP 752
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 132/293 (45%), Gaps = 2/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ LCK+ V A F K + F P + +Y+ +++G + + ++ EM
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+ V+Y ++NA R EA L M A C P F +I GL E +
Sbjct: 64 GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + RGF P+ + ++ A C R+++A+ ++ G P+ TY+ ++
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KAGR E A V + ++ + + PTV T+ I V + A +D M GV
Sbjct: 184 DGLYKAGRLEAAGMVLQLLA-ESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM-LDIGIRPPGQLFSNLKQALRDE 304
P Y LI+ LC KLD A ++ G+ L L QA R E
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLE 295
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 115/207 (55%), Gaps = 1/207 (0%)
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGL R+ +A F ++ + GF P TY+ V+ C ++ ++++EM
Sbjct: 6 VLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGR 65
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN TY+ +++ L+ GR +EA+S+ +RM+ G P + T+ ++++ C +++
Sbjct: 66 GCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAAN-GCPPELITFGLIIKGLCKEGEIEA 124
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A R+ DEM RG +P + +++ L+++LC ++D+A +FQ++L IG P ++ +
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVD 184
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLV 326
L G E A ++ Q + + +P V
Sbjct: 185 GLYKAGRLEAAGMVLQLLAESFSSPTV 211
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 145/310 (46%), Gaps = 12/310 (3%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTIL---LEGWGQQK 59
+FG + + ++ +ID LC+ V++ ++ ++M R P+ +Y L L G G+ K
Sbjct: 29 QFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAK 88
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
S+ E M +G P+++++G++I C + A + EM P I
Sbjct: 89 EAFSLLE---RMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHT 145
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L++ L R+ EA FF Q GF P+A TYN +V + R+ A ++ + +
Sbjct: 146 VLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAES 205
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P T+ I + L KAG AY F M + G P TY+ ++ C ++D+
Sbjct: 206 FSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMP-QTGVSPNTVTYDALIDGLCKAGKLDI 264
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI-GIRPPGQLFSNLK 298
A+ + + ++ M +S+L++ LC +L++A + + M + + L + L
Sbjct: 265 ALGLLRDKNSQA---GMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLC 321
Query: 299 QALR-DEGME 307
QA R DE E
Sbjct: 322 QARRVDEAFE 331
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 153/336 (45%), Gaps = 32/336 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G EL F +I LCK +E A V D+M R F PD++ +T+LL +
Sbjct: 97 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGR 156
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++ GF PD V+Y M++ A R + A + + + + P+ F
Sbjct: 157 VDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTI 216
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM-DEMRKC 179
++GL L+ A +FF + G P TY+A++ C + +++ A ++ D+ +
Sbjct: 217 AVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQA 276
Query: 180 GI----------------------------GPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
G+ PN ++ +++ L +A R +EA+ +F M
Sbjct: 277 GMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVM 336
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK-ARGVLPVMHMYSTLINSLCHED 270
++ G V TY I+++ C ++ A R + M+ G P + +STLI LC+
Sbjct: 337 -KESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG 395
Query: 271 KLDDACKYFQEMLDI-GIRPPGQLFSNLKQALRDEG 305
+++ A + ++ M+ + GI P ++ L + L G
Sbjct: 396 RVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAG 431
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+Y +L+ G + + +R+ GF P VV+Y +I+ C D+ +L EM
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
C P+ + TL+N L + R EA + G PE T+ ++ C I
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
A+R++DEM G P+ + ++LH L + GR +EA+ F+++ G P TY
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV-LLIGFTPDAVTYNT 181
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+V +++ A + + P + ++ ++ L L A ++F M G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVL 313
+ P + L L G + A+ L
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGL 268
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 1/226 (0%)
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
+V+Y ++IN C A R +A FR+ +P+ + T+I+GL + + + +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ RG P A TYN +V A R +A+ +++ M G P T+ +++ L K G
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
E A+ V M + G P V + +++ C +VD A + ++ G P Y
Sbjct: 121 EIEAAFRVVDEMVDR-GFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+T+++ L +L+ A Q + + P F+ L G
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAG 225
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 115/248 (46%), Gaps = 6/248 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + +I LC + ++ A F + + D SY L+ +
Sbjct: 815 MKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE--ISYNTLITSLVASRR 872
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ R M DG PD +Y +++ A + A +L +EM + P +
Sbjct: 873 SEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTI 932
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL K+L A +F + ++ +P+A Y++++ A+C + +++DA+++ +R G
Sbjct: 933 MISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LRSSG 989
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P Y ++ L K T++A V + M K EP + + + + +VD A
Sbjct: 990 IEPTITMYSTMVDSLCKNRGTDKALEVIREMKSK-NCEPGIHIWTSLATAYVAEGRVDEA 1048
Query: 241 MRIWDEMK 248
+++ ++++
Sbjct: 1049 VKLVNDLQ 1056
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY +++ C +V A + + G P + YST+I+ LC ++++D CK +EM
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 283 LDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
G P ++ L AL +G + A L +++
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERM 97
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 162/338 (47%), Gaps = 27/338 (7%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K +PD + LID LCK+ H+ERA + KMK++ PD+ SYTILL+ + L +
Sbjct: 372 KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 431
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E ++ + G+ +V +Y +MIN C A + EA++L +ME C P F T+I
Sbjct: 432 AKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIIC 491
Query: 124 GL-------GSEK----------------RLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
L +EK RL EA K +P+ TY ++ Y
Sbjct: 492 ALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGY 551
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
+ A + M + G+ PN + Y I++ L K +EA S+F+ M K P
Sbjct: 552 FLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHK-NMFPN 610
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
+ TY ++ C N ++ A+ + EMK G+ P ++ Y+ L++ LC +L+ A + FQ
Sbjct: 611 IVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQ 670
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+L G Q+++ + L G+ + A+ L K++
Sbjct: 671 RLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKME 708
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 151/314 (48%), Gaps = 1/314 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ LCK+ + + K++ PD+ Y ++ + K L
Sbjct: 163 GFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDA 222
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y EM G P+VV+Y ++ C EA L EM+ N P F TLI+
Sbjct: 223 CDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDA 282
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
LG E ++ A K +P+ TYN+++ Y + ++ +A + M + G+ PN
Sbjct: 283 LGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPN 342
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
RTY ++ L K +EA S+F+ M K P + TY ++ C N ++ A+ +
Sbjct: 343 VRTYTTMIDGLCKEKMVDEAMSLFEEMKYK-NMIPDIVTYTSLIDGLCKNHHLERAIALC 401
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+MK +G+ P ++ Y+ L+++LC +L++A ++FQ +L G Q ++ + L
Sbjct: 402 KKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKA 461
Query: 305 GMEETAVVLAQKID 318
+ A+ L K++
Sbjct: 462 DLFGEAMDLKSKME 475
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 155/325 (47%), Gaps = 12/325 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+ C H++ A + ++MK + +PD+ ++ L++ G++ + +
Sbjct: 233 GISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAA 292
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V M +PDVV+Y +I+ + + A +F M + P+ + T+I+G
Sbjct: 293 KIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDG 352
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L EK + EA+ F + K + P+ TY +++ C + + A + +M++ GI P+
Sbjct: 353 LCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 412
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+L L K GR E A F+R+ K G V TY +++ C AM +
Sbjct: 413 VYSYTILLDALCKGGRLENAKEFFQRLLVK-GYHLNVQTYNVMINGLCKADLFGEAMDLK 471
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M+ +G +P + T+I +L +D+ D A K +EM+ G+ Q R
Sbjct: 472 SKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL-----------QEARKV 520
Query: 305 GMEETAVVLAQKIDKLRKTPLVDRG 329
++E +VLA K +V G
Sbjct: 521 RLKEAKIVLAVMTKACIKPDVVTYG 545
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 152/339 (44%), Gaps = 22/339 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K +K ++ +N LID V+ A+ VF M + P++++YT +++G ++K
Sbjct: 299 MMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKM 358
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EMK PD+V+Y +I+ C + A+ L ++M+ +P + +
Sbjct: 359 VDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTI 418
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L RL A +FF + +G+ TYN ++ C + +A + +M G
Sbjct: 419 LLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKG 478
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM----------------------SRKPGTE 218
P+ T+ ++ L + ++A + + M K +
Sbjct: 479 CMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIK 538
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V TY ++ + ++ A ++ M GV P + Y+ +I+ LC + +D+A
Sbjct: 539 PDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSL 598
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
F+EM + P +++L AL E A+ L +++
Sbjct: 599 FEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEM 637
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A+ V M K PD+ +Y L++G+ L V+ M G P+V Y I
Sbjct: 522 LKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTI 581
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
MI+ C K DEA+ LF EM+ N P+ + +LI+ L L A+ + K+ G
Sbjct: 582 MIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHG 641
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P+ +Y ++ C S R+ A + + G N + Y +++ L KAG +EA
Sbjct: 642 IQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEAL 701
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
+ +M K G P T++I++ + D A +I EM ARG++
Sbjct: 702 DLQXKMEDK-GCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 137/339 (40%), Gaps = 34/339 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN ++ +L ++H +F K + PD+ + IL+ + ++ V +
Sbjct: 66 FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G+ P+ ++ +I C +A+ ++ A + + + TLINGL
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + + +P+ YN ++ + C + + DA + EM GI PN TY+ ++
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV 245
Query: 193 HHLIKAGRTEEAYSVFKRMS----------------------------------RKPGTE 218
+ G +EA+S+ M K +
Sbjct: 246 YGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK 305
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V TY ++ + + +V A ++ M GV P + Y+T+I+ LC E +D+A
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSL 365
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
F+EM + P +++L L E A+ L +K+
Sbjct: 366 FEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKM 404
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 118/269 (43%), Gaps = 1/269 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A FD+M R P + +L K+ ++ ++++ + +G PD+ + I++N
Sbjct: 47 AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C A + + P+ TLI GL + +AL F Q +GF+
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+Y ++ C + R++ ++ + P+ Y+ ++H L K +A ++
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K G P V TY +V FC + A + +EMK + + P + ++TLI++L
Sbjct: 227 SEMIVK-GISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGK 285
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
E K+ A M+ I+P +++L
Sbjct: 286 EGKMKAAKIVLAVMMKACIKPDVVTYNSL 314
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 103/211 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K +K ++ + L+D ++ A+ VF M + P+++ YTI+++G ++K
Sbjct: 532 MTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKT 591
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EMK P++V+Y +I+A C + A+ L +EM+ +P + +
Sbjct: 592 VDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTI 651
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL RL A + F + +G+ Y A++ C + ++A + +M G
Sbjct: 652 LLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKG 711
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
P+ T+DI++ L + ++A + M
Sbjct: 712 CMPDAVTFDIIIWALFEKDENDKAEKILXEM 742
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 94/181 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + +ID LCK + V+ A +F++MK + P+I +YT L++ + +
Sbjct: 567 MAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHH 626
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +EMK+ G +PDV SY I+++ C + R + A E+F+ + + ++
Sbjct: 627 LERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTA 686
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN L EAL + + +G P+A T++ ++ A + A +++ EM G
Sbjct: 687 MINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746
Query: 181 I 181
+
Sbjct: 747 L 747
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LID LCK+ H+ERA + +MK+ PD+ SYTILL+G + L E+++ +
Sbjct: 614 YTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLL 673
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G+ +V Y MIN C A +DEA++L +ME C P F +I L +
Sbjct: 674 VKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDEND 733
Query: 133 EALQFFGQSKKRGFEPE 149
+A + + RG E
Sbjct: 734 KAEKILXEMIARGLMKE 750
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 1/136 (0%)
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P T ++ +L L+ S+FK+ G P + T I++ FC+ + A
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESN-GATPDLCTLNILMNCFCHLTHITFAFS 119
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ + RG P +TLI LC ++ A + +++ G + + L L
Sbjct: 120 VLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLC 179
Query: 303 DEGMEETAVVLAQKID 318
G + L +K++
Sbjct: 180 KTGETKAVARLLRKLE 195
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 149/296 (50%), Gaps = 5/296 (1%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
E+ FN L+D LCK VE A+ ++ KM+K P+ ++Y I + GW + +N ++
Sbjct: 131 EINAFNLLLDALCKCCLVEDAETLYKKMRKT-VKPNAETYNIFVFGWCRVRNPTRGMKLL 189
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME---ATNCKPSPHIFCTLINGL 125
EM + G PD +Y I+ +C A EAV+LF M ++ P+ + +I L
Sbjct: 190 EEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVAL 249
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+ E + G G P+ TY ++ C +I++AY+ ++EM P+
Sbjct: 250 AQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDI 309
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ L L ++E+A ++ RM + P+V TY +++ MF D A W
Sbjct: 310 VTYNCFLKVLCDNKKSEDALKLYGRMI-ELNCIPSVQTYNMLISMFFEIDDPDGAFETWQ 368
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM RG P + YS +I+ L + +K++DAC +E+++ GI+ P + F + L
Sbjct: 369 EMDNRGCRPDIDTYSVMIDGLFNCNKVEDACFLLEEVINKGIKLPYKKFDSFLMQL 424
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 5/238 (2%)
Query: 93 AKRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
++Y V+ F K P I F L++ L + +A + + +K +P A
Sbjct: 108 TEKYLTHVQKFARKRRIRVKTQPEINAFNLLLDALCKCCLVEDAETLYKKMRK-TVKPNA 166
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
TYN V +C ++++EM + G P+ Y+ + KAG EA +F+
Sbjct: 167 ETYNIFVFGWCRVRNPTRGMKLLEEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEF 226
Query: 211 MSRKPGT--EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K + PT TY I++ + +++ ++ M + G LP + Y +I +C
Sbjct: 227 MRTKGSSISSPTAKTYAIIIVALAQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCV 286
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
K+D+A K+ +EM + RP ++ + L D E A+ L ++ +L P V
Sbjct: 287 CGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSV 344
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 100/239 (41%), Gaps = 38/239 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFD---PDIKSYTILLEGWGQQK---------- 59
+N IDT CK+ V A ++F+ M+ + P K+Y I++ Q
Sbjct: 204 YNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVALAQHDRMEECFKLIG 263
Query: 60 NLLS----------------------MNEVYR---EMKDDGFEPDVVSYGIMINAHCSAK 94
+++S ++E Y+ EM + + PD+V+Y + C K
Sbjct: 264 HMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNK 323
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+ ++A++L+ M NC PS + LI+ A + + + RG P+ TY+
Sbjct: 324 KSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDIDTYS 383
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
++ ++ DA +++E+ GI + +D L L G + + V + M +
Sbjct: 384 VMIDGLFNCNKVEDACFLLEEVINKGIKLPYKKFDSFLMQLSVIGDLQAIHRVSEHMRK 442
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 77/172 (44%), Gaps = 3/172 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + +I+ +C ++ A + ++M + + PDI +Y L+ K +
Sbjct: 271 LPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALK 330
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y M + P V +Y ++I+ D A E ++EM+ C+P + +I+GL
Sbjct: 331 LYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDGLF 390
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+ ++ +A + +G + +++ + + +R+ + MRK
Sbjct: 391 NCNKVEDACFLLEEVINKGIKLPYKKFDSFLMQLSVIGDLQAIHRVSEHMRK 442
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 159/312 (50%), Gaps = 2/312 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
L F+ + T CK V +A ++ D+M+ + PD+ +Y +L+ G ++ L +
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
M G +P+V+++ I++ + CS R+ +A +L +M C PS F LIN L +
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
L A+ + G P + +YN ++ +C +++ A +D M G P+ TY
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ +L L K G+ + A + ++S K G P + TY V+ + + A+++ DEM+
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSK-GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+G+ P + YS+L++ L E K+D+A K+F ++ +GIRP ++++ L +
Sbjct: 320 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 379
Query: 309 TAV-VLAQKIDK 319
A+ LA I K
Sbjct: 380 RAIDFLAYMISK 391
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 131/272 (48%), Gaps = 7/272 (2%)
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
G GQ LL EM++ G +PDVV+Y ++IN C R DEA++ M + C+
Sbjct: 96 SGVGQAMKLLD------EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQ 149
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ ++ + S R +A + ++G P T+N ++ C + A +
Sbjct: 150 PNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDI 209
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+++M G PN+ +Y+ +LH K + + A M + G P + TY ++ C
Sbjct: 210 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR-GCYPDIVTYNTLLTALC 268
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+ +VD+A+ I +++ ++G PV+ Y+T+I+ L K + A K EM G++P
Sbjct: 269 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII 328
Query: 293 LFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+S+L L EG + A+ ++ L P
Sbjct: 329 TYSSLVSGLSREGKVDEAIKFFHDLEGLGIRP 360
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 128/253 (50%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI+ LC+ + RA ++ +KM P+ SY LL G+ ++K
Sbjct: 178 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 237
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E M G PD+V+Y ++ A C + D AVE+ ++ + C P + T
Sbjct: 238 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 297
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + A++ + +++G +P+ TY+++V ++++A + ++ G
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 357
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ L K+ +T+ A M K +PT +TY I++ Y A
Sbjct: 358 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK-RCKPTEATYTILIEGIAYEGLAKEA 416
Query: 241 MRIWDEMKARGVL 253
+ + +E+ +RG++
Sbjct: 417 LDLLNELCSRGLV 429
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + + N ++ ++C + A+++ M ++ P + ++ IL+ +Q
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 202
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ +M G P+ +SY +++ C K+ D A+E M + C P + T
Sbjct: 203 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 262
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L + ++ A++ Q +G P TYN V+ + A +++DEMR+ G
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 322
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ L + G+ +EA F + G P TY ++ C + Q D A
Sbjct: 323 LKPDIITYSSLVSGLSREGKVDEAIKFFHDL-EGLGIRPNAITYNSIMLGLCKSRQTDRA 381
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ M ++ P Y+ LI + +E +A E+ G+
Sbjct: 382 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 428
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 1/199 (0%)
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
E + +A++ + + +G +P+ TYN ++ C R+++A + ++ M G PN T
Sbjct: 95 ESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVIT 154
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++I+L + GR +A + M RK G P+V T+ I++ C + A+ I ++M
Sbjct: 155 HNIILRSMCSTGRWMDAEKLLSDMLRK-GCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
G P Y+ L++ C E K+D A +Y M+ G P ++ L AL +G
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273
Query: 308 ETAVVLAQKIDKLRKTPLV 326
+ AV + ++ +P++
Sbjct: 274 DVAVEILNQLSSKGCSPVL 292
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 166/332 (50%), Gaps = 15/332 (4%)
Query: 1 MDKF-GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M+ F G + + +F L+DTLCK ++ + A EVF+K +K +++P+ K YT+L+ GW +
Sbjct: 163 MEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNK-RKYKYEPNEKMYTVLIYGWCKVN 221
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAK------RYDEAV----ELFREMEAT 109
+ ++M G EP++V+Y I++N C R+D V +L +EM
Sbjct: 222 RNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQR 281
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+P+ + +++ + L F K+RG P TY +V+ R++DA
Sbjct: 282 GIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDA 341
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT--EPTVSTYEIV 227
++DEM G+ P+ TY+ A ++ +M + PG+ P + TY I+
Sbjct: 342 ESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKM-KAPGSPATPDIHTYNIL 400
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ MF Q D M++W++M V P ++ Y+ L++ LC K +AC++F EM++ G
Sbjct: 401 LGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGF 460
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
P F L + L M T L +++D+
Sbjct: 461 LPQKITFETLYRGLIQADMLRTWRRLKKRVDE 492
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
A Y+AVV A + + + A+R++ E G RT+ ++ + AG T +A F
Sbjct: 103 ADAYDAVVDALGRARQFDAAWRLVVEAAADGAA-TPRTFAVLARRYVAAGMTRQAVRAFD 161
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M G EP + + ++ C +A ++++ K + P MY+ LI C
Sbjct: 162 DMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYK-YEPNEKMYTVLIYGWCKV 220
Query: 270 DKLDDACKYFQEMLDIGIRP 289
++ D A K+ ++M+ GI P
Sbjct: 221 NRNDMAQKFLKDMIYHGIEP 240
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 147/318 (46%), Gaps = 15/318 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I C S AQ + +M +R+ P++ +Y L+ + ++
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+Y EM G P+ ++Y MI+ C R D A ++F M C P F TLI+G
Sbjct: 343 AELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDG 402
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
KR+ + ++ + +RG TYN ++ +C +N A + +M G+ P+
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPD 462
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRMFCYN 234
T + +L L G+ ++A +FK M + G EP V TY I++
Sbjct: 463 IVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINE 522
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+ A +++EM RG++P YS++I+ LC + +LD+A + F M P F
Sbjct: 523 GKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTF 582
Query: 295 SNL-----KQALRDEGME 307
+ L K D+G+E
Sbjct: 583 NTLINGYCKAGRVDDGLE 600
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 160/318 (50%), Gaps = 6/318 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ F L+ LC V A ++F ++ + PD+ ++T L+ G ++
Sbjct: 142 LTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGR 197
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFC 119
++ + M ++G +PD ++YG ++ C A+ L R+ME ++ KP+ I+
Sbjct: 198 VVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYS 257
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+GL + R S++ F + + +G P TYN ++G +C S R + A R++ EM +
Sbjct: 258 AIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLER 317
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I PN TY+ +++ +K G+ EA ++ M + G P TY ++ FC ++D
Sbjct: 318 KISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR-GIIPNTITYNSMIDGFCKQDRLDA 376
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ M +G P + ++TLI+ C ++DD + EM G+ ++ L
Sbjct: 377 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 436
Query: 300 ALRDEGMEETAVVLAQKI 317
G A+ L+Q++
Sbjct: 437 GFCLVGDLNAALDLSQQM 454
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 141/282 (50%), Gaps = 12/282 (4%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DFN+L+ + + + ++ KM++++ DI S+TIL++ + L + ++
Sbjct: 83 DFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 142
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G PDVV++ +++ C R EA++LF ++ C+P F TL+NGL E R+
Sbjct: 143 TKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRV 198
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK----CGIGPNTRT 187
EA+ + + G +P+ TY V C ++ D ++ +RK I PN
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMC---KMGDTVSALNLLRKMEEISHIKPNVVI 255
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ L K GR +++++F M K G P + TY ++ FC + + A R+ EM
Sbjct: 256 YSAIIDGLCKDGRHSDSHNLFIEMQDK-GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
R + P + Y+ LIN+ E K +A + + EML GI P
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 12/316 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID CK ++ A+++F M + PD+ ++T L++G+ K + E+ EM
Sbjct: 361 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + V+Y +I+ C + A++L ++M ++ P TL++GL +L
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480
Query: 133 EALQFFGQSKK-----------RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+AL+ F +K G EP+ TYN ++ + +A + +EM GI
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+T TY ++ L K R +EA +F M K + P V T+ ++ +C +VD +
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFS-PNVVTFNTLINGYCKAGRVDDGL 599
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ EM RG++ +Y TLI ++ A FQEM+ G+ P N+
Sbjct: 600 ELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659
Query: 302 RDEGMEETAVVLAQKI 317
+ E AV + + +
Sbjct: 660 WSKEELERAVAMLEDL 675
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 131/282 (46%), Gaps = 4/282 (1%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ +E A ++F M + R P + + L+ + + + +Y++M+ D+ S+
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+I CS + A+ F ++ P F TL++GL + R+SEAL F Q +
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR 179
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P+ T+ ++ C R+ +A ++D M + G+ P+ TY + + K G T
Sbjct: 180 ----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++ ++M +P V Y ++ C + + + ++ EM+ +G+ P + Y+ +I
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C + A + QEML+ I P ++ L A EG
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEG 337
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 11/223 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-----------PDIKSYTILLE 53
G+ ++ N L+D LC + ++ A E+F M+K + D PD+ +Y IL+
Sbjct: 458 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 517
Query: 54 GWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
G + L E+Y EM G PD ++Y MI+ C R DEA ++F M + + P
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSP 577
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ F TLING R+ + L+ F + +RG +A Y ++ + IN A +
Sbjct: 578 NVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIF 637
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
EM G+ P+T T +L E A ++ + + G
Sbjct: 638 QEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVG 680
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
K L +A+ F + P +N ++GA R + + +M + I + ++
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
I++ + A S F +++ K G P V T+ ++ C + +V A+ ++ ++
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLT-KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC 178
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
VL ++TL+N LC E ++ +A M++ G++P + + G
Sbjct: 179 RPDVLT----FTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234
Query: 309 TAVVLAQKIDKL 320
+A+ L +K++++
Sbjct: 235 SALNLLRKMEEI 246
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 160/313 (51%), Gaps = 4/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
FN +I LC+ + +A +V +K P + +Y L++G+ G N+ ++ + +
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK 253
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM + G P V++G++IN +C AV +F EM+ S + +LI+GL SE
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ E ++ + + G P T+ V+ +C + DA +D M + + P+ Y
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYT 373
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I++ + G+ E+A +V + M++K G P V+TY ++ F + A + DEMK
Sbjct: 374 ILIDGYRRLGKMEDAMAVKEAMAKK-GISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G+ + Y+ LI +LC + ++ A K EM ++G+ P ++ + Q D+G ++
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492
Query: 310 AVVLAQKIDKLRK 322
A + +++K RK
Sbjct: 493 AYEIRTRMEKCRK 505
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 147/343 (42%), Gaps = 39/343 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCK---SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+ +GL + +N LID CK + ++ + +M + P ++ +L+ G+ +
Sbjct: 217 IKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCK 276
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
N + V+ EMK G VV+Y +I+ CS + +E V+L EME P+
Sbjct: 277 NSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEIT 336
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
F ++ G + +++A + +R EP+ Y ++ Y ++ DA + + M
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMA 396
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K GI PN TY+ ++ ++G A + M K G E V TY +++ C +V
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK-GIEADVVTYNVLIGALCCKGEV 455
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHE---------------------------- 269
A+++ DEM G+ P Y+T+I C +
Sbjct: 456 RKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVF 515
Query: 270 -------DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
K+D+A EMLD + P G + +K+ + ++G
Sbjct: 516 IKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
+PS L+ GL KR+ A + F + +R P+ T+N V+ C ++ A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV---FKRMSRKPGTEPTVSTYEIVV 228
+ +++ G+ P+ TY+ ++ K G Y V K M + G PT T+ +++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV-EAGISPTAVTFGVLI 271
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+C N+ A+R+++EMK +G+ + Y++LI+ LC E K+++ K +EM D+G+
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 289 PPGQLFSNLKQALRDEGM 306
P F + + +GM
Sbjct: 332 PNEITFGCVLKGFCKKGM 349
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 4/252 (1%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P S ++ AKR D A + FR P + F T+I+GL +L +A
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR---MMDEMRKCGIGPNTRTYDIVLHH 194
K G P TYN+++ YC + Y ++ EM + GI P T+ ++++
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K T A VF+ M ++ G +V TY ++ C +V+ +++ +EM+ G+ P
Sbjct: 274 YCKNSNTAAAVRVFEEM-KQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ ++ C + + DA + M + + P +++ L R G E A+ +
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392
Query: 315 QKIDKLRKTPLV 326
+ + K +P V
Sbjct: 393 EAMAKKGISPNV 404
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 94/191 (49%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LID + +E A V + M K+ P++ +Y L+ G+ + + S + + EMK
Sbjct: 372 YTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G E DVV+Y ++I A C +AV+L EM +P+ + T+I G + +
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + +K TYN + +C ++++A +++EM + PN TY+ +
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIK 551
Query: 193 HHLIKAGRTEE 203
+++ G T +
Sbjct: 552 EGMMEKGYTPD 562
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 158/312 (50%), Gaps = 2/312 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L +N +I C++ ++ A +V D+MK + F PDI +Y IL+ + L S E
Sbjct: 125 DLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFK 184
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
++ + +P VV+Y I+I A DEA++L EM N +P + ++I G+ E
Sbjct: 185 NQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCRE 244
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ A Q +G+ P+ TYN ++ + Y +M +M G N TY
Sbjct: 245 GYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTY 304
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+++ + + G+ EE + K M +K G +P Y+ ++ C +VD+A+ + D M
Sbjct: 305 SVLISSVCRDGKVEEGVGLLKDMKKK-GLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+ G +P + Y+T++ LC + + D+A F+++ ++G P ++++ AL G +
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423
Query: 309 TAV-VLAQKIDK 319
A+ ++ + +DK
Sbjct: 424 RALGMILEMLDK 435
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 162/320 (50%), Gaps = 2/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ +LI L S+ +++A +V ++ PD+ +Y ++ G+ + + S
Sbjct: 87 GHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGFCRANRIDSA 145
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V MK+ GF PD+V+Y I+I + CS D A+E ++ NCKP+ + LI
Sbjct: 146 YQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEA 205
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + EA++ + + +P+ TYN+++ C ++ A++++ + G P+
Sbjct: 206 TLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPD 265
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I+L L+ G+ E Y + M + G E V TY +++ C + +V+ + +
Sbjct: 266 VITYNILLRGLLNQGKWEAGYELMSDMVAR-GCEANVVTYSVLISSVCRDGKVEEGVGLL 324
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+MK +G+ P + Y LI +LC E ++D A + M+ G P ++ + L +
Sbjct: 325 KDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQ 384
Query: 305 GMEETAVVLAQKIDKLRKTP 324
+ A+ + +K+ ++ +P
Sbjct: 385 KRADEALSIFEKLGEVGCSP 404
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 150/319 (47%), Gaps = 3/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + L+ ++ +N +I +C+ +V+RA ++ + + + PD+ +Y ILL G Q
Sbjct: 222 MLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGK 281
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M G E +VV+Y ++I++ C + +E V L ++M+ KP + +
Sbjct: 282 WEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDP 341
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L E R+ A++ G P+ YN ++ C R ++A + +++ + G
Sbjct: 342 LIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVG 401
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +Y+ + L G A + M K G +P TY ++ C + VD A
Sbjct: 402 CSPNASSYNSMFSALWSTGHKVRALGMILEMLDK-GVDPDGITYNSLISCLCRDGMVDEA 460
Query: 241 MRIWD--EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
+ + EM++ P + Y+ ++ LC ++ DA + M+D G RP ++ L
Sbjct: 461 IELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLI 520
Query: 299 QALRDEGMEETAVVLAQKI 317
+ + G A LA +
Sbjct: 521 EGIGFGGCLNDARDLATTL 539
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 141/313 (45%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N LI +LC ++ A E +++ K P + +YTIL+E Q
Sbjct: 152 MKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGG 211
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + +PD+ +Y +I C D A ++ + + P +
Sbjct: 212 IDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNI 271
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL ++ + + RG E TY+ ++ + C ++ + ++ +M+K G
Sbjct: 272 LLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKG 331
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ YD ++ L K GR + A V M G P + Y ++ C + D A
Sbjct: 332 LKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISD-GCVPDIVNYNTILACLCKQKRADEA 390
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I++++ G P Y+++ ++L A EMLD G+ P G +++L
Sbjct: 391 LSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISC 450
Query: 301 LRDEGMEETAVVL 313
L +GM + A+ L
Sbjct: 451 LCRDGMVDEAIEL 463
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 2/220 (0%)
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
C A ++E++ R + KP + LI+GL + K + +A+Q + G P+
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
YNA++ +C + RI+ AY+++D M+ G P+ TY+I++ L G + A FK
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE-FKN 185
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
K +PTV TY I++ +D AM++ DEM + P M Y+++I +C E
Sbjct: 186 QLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREG 245
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+D A + + G P ++ L + L ++G E
Sbjct: 246 YVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAG 285
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 35/277 (12%)
Query: 69 REMKDDGFEPDVV----------------------------------SYGIMINAHCSAK 94
R + + G +PDVV +Y +I C A
Sbjct: 81 RHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGHPDLIAYNAIITGFCRAN 140
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
R D A ++ M+ P + LI L S L AL+F Q K +P TY
Sbjct: 141 RIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYT 200
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ A I++A +++DEM + + P+ TY+ ++ + + G + A+ + +S K
Sbjct: 201 ILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSK 260
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P V TY I++R + + + +M ARG + YS LI+S+C + K+++
Sbjct: 261 -GYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEE 319
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
++M G++P G + L AL EG + A+
Sbjct: 320 GVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAI 356
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 152/309 (49%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L FN +I+ LCK V+ A+ + + + P+ +YT L+ G + NL
Sbjct: 197 GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLA 256
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M DG +P+ V+Y +IN CS R +EA+++ EM +P+ + + +
Sbjct: 257 FAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVS 316
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L SEA++ G+ KKRG P T+ A++ + A + +M G+ P
Sbjct: 317 LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+ +++ L GR E A+++FK M G+ P+ TY +++ FC + AM I+
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSH-GSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M G P + Y+TLI C + L++A + + M G++P ++ L
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495
Query: 305 GMEETAVVL 313
G E A L
Sbjct: 496 GKLEHATSL 504
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 156/336 (46%), Gaps = 10/336 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N LI CK ++ A + + MK PD +YT L+ G+ +
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ M + G P+ V+Y +I+ + + + D+A+ LF +M + PS +
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G +SEA F G+ K+G P TY + + C + R A+++ EM K
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEA--YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
PN TY +++ L + GR E+A Y++ R++ G EP V TY +V+ C +
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY-GCEPNVDTYTTLVKGLCGEGRCY 676
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++ M+ +G+ P +Y L+ C K++ A F M +G + + L
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736
Query: 299 QALRDEGMEETAVVLAQKI-------DKLRKTPLVD 327
AL E E A + Q + D++ T L+D
Sbjct: 737 CALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLD 772
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 137/303 (45%), Gaps = 3/303 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +N LI+ LC E A +F M P ++Y +++ + ++
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M G P+V++Y +I +C + A+ L M+ KP + LI+G
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L A F + G P TY A++ Y +++DA + +M + G P+
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++TY++++ K EA + +M ++ G P V TY + C N + +A +I+
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQ-GLLPNVITYTSFIDGLCRNGRTGLAFKIF 610
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY--FQEMLDIGIRPPGQLFSNLKQALR 302
EM+ R P ++ YS+LI LC E + +DA Y + G P ++ L + L
Sbjct: 611 HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC 670
Query: 303 DEG 305
EG
Sbjct: 671 GEG 673
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + + + +LC + A E+ KMKKR P+I+++T L+ G +
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+Y +M DG P V+Y +IN C R++ A +F+ M + PS + +I
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A+ F + K G P TYN ++ YC +N+A R+++ M+ G+ P+
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ + G+ E A S+F M + G P TY ++ + A+VD A+ ++
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGM-MEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M G LP Y+ +I+ + + +A + +M+ G+ P +++ L
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN 600
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G A + +++K P
Sbjct: 601 GRTGLAFKIFHEMEKRNYFP 620
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 145/302 (48%), Gaps = 2/302 (0%)
Query: 26 VERAQEVFDKMK-KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
V+R + ++ K F + S+T LL G+ + ++Y +M + G P ++++
Sbjct: 147 VKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFN 206
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
MIN C R EA + + + P+ + +LI G L A F + K
Sbjct: 207 TMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD 266
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P + TY+ ++ C R+ +A M++EM + GI P TY I L L AG + EA
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+ +M +K G P + T+ ++ + + ++A+ ++ +M A G++P Y+ LIN
Sbjct: 327 VELLGKM-KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
LC E + + A F+ ML G P Q ++ + + G + A+V+ K+ K +P
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 325 LV 326
V
Sbjct: 446 NV 447
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 131/283 (46%), Gaps = 1/283 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI+ LC +E A ++ ++M ++ +P + +YTI L E+ +MK
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P++ ++ +I+ +++ A+ L+ +M A P+ + LIN L E R
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A F G P TYN ++ +C I A + D+M K G PN TY+ ++
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLI 454
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K G A + + M + G +P TY ++ F +++ A ++ M G+
Sbjct: 455 YGYCKQGNLNNAMRLLEIM-KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
P Y+ +I+ + K+DDA F +M++ G P Q ++
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 6/277 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I K+ + A+ KM K+ P++ +YT ++G + +++ EM+
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEA--VELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ P++ +Y +I C R ++A L + C+P+ + TL+ GL E R
Sbjct: 615 KRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR 674
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
EA Q +K+G +P Y A++ C ++++ A + M G + Y
Sbjct: 675 CYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKA 734
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L K EEA +F+ M K V+ + +++ + D+ +++ M++R
Sbjct: 735 LICALCKENFIEEAQCIFQTMLEKHWNSDEVA-WTVLLDGLLKEGETDLCLKLLHVMESR 793
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
Y L L LD A K Q +GI
Sbjct: 794 NCTLNFQTYVMLAREL---SALDCAIKIPQISQQLGI 827
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
MD G + L D+ LI LCK +E AQ +F M ++ ++ D ++T+LL+G
Sbjct: 720 MDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDG 773
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 59/153 (38%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +G + + + L+ LC A ++ M+K+ P + Y LL G +
Sbjct: 650 LTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLK 709
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S ++ M GF+ + Y +I A C +EA +F+ M + +
Sbjct: 710 VESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTV 769
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
L++GL E L+ + R TY
Sbjct: 770 LLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 166/325 (51%), Gaps = 1/325 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
++ L ++ + LI C++R+++ A VFD+M K DP+ +Y+ L+ G + +
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ EM + G EP V +Y + I A C+ + +EA+EL M+ C+P+ + LI
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 345
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL +L A+ + + K G P TYNA++ C R + A ++ M G
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL 405
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
NT+TY+ ++ L G E+A +F++M K G PTV TY ++ + V+ A R
Sbjct: 406 ANTQTYNEIIKGLCLGGDIEKAMVLFEKM-LKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D MK G P Y+ L++ KL+ A YFQEM++ G+ P ++ L
Sbjct: 465 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHS 524
Query: 303 DEGMEETAVVLAQKIDKLRKTPLVD 327
+G + A+ L ++++++ P V+
Sbjct: 525 KDGKVDIALSLLKRMEEMGCNPNVE 549
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 161/327 (49%), Gaps = 11/327 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G +N +I LC +E+A +F+KM K P + +Y L+ G+ + N
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + MK++G EPD +Y +++ + + A F+EM P+P +
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + ++ AL + ++ G P +YNAV+ R ++A ++ D+M + G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ L + GRT+ A+ +F M ++ P + TY ++ C + D A
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL-PNLYTYSSLIYGLCQEGKADEA 637
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ EM+ +G+ P +++LI+ ++D A + M+D+G +P + +S L +
Sbjct: 638 EILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKG 697
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVD 327
L+ E ++L +KI PLVD
Sbjct: 698 LQKE-----CLLLEEKI-----FPLVD 714
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ G L N L+ L K VE A+ ++ +M P + ++ L+ ++
Sbjct: 154 ISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 213
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ PDV +Y +I HC + D A +F M C P+ + T
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 273
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL +E R+ EAL + ++G EP TY + A C +A ++ M+K G
Sbjct: 274 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 333
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +TY ++ L + G+ E A ++ +M K G P TY ++ C + A
Sbjct: 334 CRPNVQTYTALISGLSRLGKLEVAIGLYHKM-LKEGLVPNTVTYNALINELCVGGRFSTA 392
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++I+ M+ G L Y+ +I LC ++ A F++ML +G P ++ L
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 301 LRDEGMEETAVVL 313
+G A L
Sbjct: 453 YLTKGNVNNAARL 465
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 161/394 (40%), Gaps = 71/394 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFD-------------------------- 34
M K G ++ LI+ LC V+ A ++ +
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318
Query: 35 ---------KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+MKKR P++++YT L+ G + L +Y +M +G P+ V+Y
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C R+ A+++F ME + + +I GL + +A+ F + K G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMD------------------------------- 174
P TYN ++ Y +N+A R++D
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498
Query: 175 ----EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
EM +CG+ PN +Y ++ K G+ + A S+ KRM + G P V +Y V+
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM-EEMGCNPNVESYNAVING 557
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A +I D+M +G+LP + Y+TLI+ LC + A K F +M P
Sbjct: 558 LSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPN 617
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+S+L L EG + A +L +++++ P
Sbjct: 618 LYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 651
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
++ R F P ++++ ++ + + + E+ GF + S ++ +
Sbjct: 119 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEM 178
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+ A L+++M + +PS F TLIN L + ++ EA Q + P+ TY +
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ +C + ++ A+ + D M K G PN+ TY +++ L GR +EA + + M K
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK- 297
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G EPTV TY + + C + A+ + MK RG P + Y+ LI+ L KL+ A
Sbjct: 298 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 357
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ +ML G+ P ++ L L G TA+
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 393
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 164/329 (49%), Gaps = 4/329 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M K + L FN I+ LC++ + +A++ + MK P++ +Y L++G+ G
Sbjct: 191 MIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGS 250
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ +EM + P+ V++ +I+ C + A + F EM+ KP+
Sbjct: 251 AGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVT 310
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LINGL + +L EA+ + + G +P TYNA++ +C + +A ++ D++
Sbjct: 311 YNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVS 370
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K + PN T++ ++ K G EE +S+ M + G P VSTY ++ C +
Sbjct: 371 KQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDE-GILPNVSTYNCLIAGLCRKQDL 429
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A + +EM+ +G+ + Y+ LI+ LC DK +A K EM ++G++P ++ L
Sbjct: 430 QAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTL 489
Query: 298 KQALRDEGMEETAVVLAQKIDKLRKTPLV 326
EG + A+ + +++K RK P V
Sbjct: 490 MDGYCMEGKLKAALNVRTRMEKERKQPNV 518
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID CK +V A++ F++M+K+ P+I +Y L+ G L +++ +M
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P++V+Y +IN C K EA ++F ++ P+ F T+I+ E +
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E G P TYN ++ C + A +++EM G+ + TY+I++
Sbjct: 396 EGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILI 455
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K ++ A + M G +P TY ++ +C ++ A+ + M+
Sbjct: 456 DGLCKNDKSRNAEKLLNEMFN-LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERK 514
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + Y+ LI C +KL+ A EML+ G+ P
Sbjct: 515 QPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNP 551
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 132/254 (51%), Gaps = 1/254 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GLK + +N LI+ LC + +E A +++DKM P+I +Y L+ G+ ++K
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ ++ P+V+++ MI+A+C +E L M P+ +
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL ++ L A + + + +G + + TYN ++ C + + +A ++++EM G
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ ++ G+ + A +V RM K +P V TY ++++ +C +++ A
Sbjct: 479 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRM-EKERKQPNVVTYNVLIKGYCKINKLEAA 537
Query: 241 MRIWDEMKARGVLP 254
+ +EM +G+ P
Sbjct: 538 NGLLNEMLEKGLNP 551
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 139/289 (48%), Gaps = 4/289 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ K+ + A E F + K F + S LL ++ + + VY+EM
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL---GSEKRLS 132
++ ++ I IN C A + ++A + +M+A P+ + TL++G GS ++
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F + P T+N ++ +C + A + +EM+K G+ PN TY+ ++
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L G+ EEA ++ +M G +P + TY ++ FC + A +++D++ + +
Sbjct: 316 NGLCNNGKLEEAIDLWDKMV-GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQEL 374
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+P + ++T+I++ C E +++ MLD GI P ++ L L
Sbjct: 375 VPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGL 423
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 4/197 (2%)
Query: 7 KQEL-PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
KQEL P+ FN +ID CK +E + M P++ +Y L+ G ++++L
Sbjct: 371 KQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQ 430
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ E+ EM++ G + DVV+Y I+I+ C + A +L EM KP+ + TL+
Sbjct: 431 AAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLM 490
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G E +L AL + +K +P TYN ++ YC ++ A +++EM + G+
Sbjct: 491 DGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLN 550
Query: 183 PNTRTYDIVLHHLIKAG 199
PN TYDIV +++ G
Sbjct: 551 PNRTTYDIVRLEMLEKG 567
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 4/255 (1%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E + KD GF+ + S +++A + + +++EM + + F INGL
Sbjct: 151 EAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGL 210
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR---MMDEMRKCGIG 182
+L++A K G P TYN +V YC Y+ M EM I
Sbjct: 211 CRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKIC 270
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN T++ ++ K A F+ M +K G +P + TY ++ C N +++ A+
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEM-QKQGLKPNIVTYNSLINGLCNNGKLEEAID 329
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+WD+M G+ P + Y+ LIN C + + +A K F ++ + P F+ + A
Sbjct: 330 LWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYC 389
Query: 303 DEGMEETAVVLAQKI 317
EGM E L +
Sbjct: 390 KEGMMEEGFSLCSSM 404
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 59/114 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GLK ++ +N LID LCK+ A+++ ++M P+ +Y L++G+ +
Sbjct: 439 MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGK 498
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
L + V M+ + +P+VV+Y ++I +C + + A L EM P+
Sbjct: 499 LKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPN 552
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK +N L+D C ++ A V +M+K R P++ +Y +L++G+ +
Sbjct: 474 MFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINK 533
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIM 86
L + N + EM + G P+ +Y I+
Sbjct: 534 LEAANGLLNEMLEKGLNPNRTTYDIV 559
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 152/309 (49%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L FN +I+ LCK V+ A+ + + + P+ +YT L+ G + NL
Sbjct: 197 GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLA 256
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M DG +P+ V+Y +IN CS R +EA+++ EM +P+ + + +
Sbjct: 257 FAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVS 316
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L SEA++ G+ KKRG P T+ A++ + A + +M G+ P
Sbjct: 317 LCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPT 376
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+ +++ L GR E A+++FK M G+ P+ TY +++ FC + AM I+
Sbjct: 377 TVTYNALINQLCVEGRFETAFTIFKWMLSH-GSLPSTQTYNEIIKCFCLMGDIQKAMVIF 435
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M G P + Y+TLI C + L++A + + M G++P ++ L
Sbjct: 436 DKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRG 495
Query: 305 GMEETAVVL 313
G E A L
Sbjct: 496 GKLEHATSL 504
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 149/319 (46%), Gaps = 3/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N LI CK ++ A + + MK PD +YT L+ G+ +
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGK 497
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ M + G P+ V+Y +I+ + + + D+A+ LF +M + PS +
Sbjct: 498 LEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNV 557
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G +SEA F G+ K+G P TY + + C + R A+++ EM K
Sbjct: 558 MISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRN 617
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEA--YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
PN TY +++ L + GR E+A Y++ R++ G EP V TY +V+ C +
Sbjct: 618 YFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY-GCEPNVDTYTTLVKGLCGEGRCY 676
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++ M+ +G+ P +Y L+ C K++ A F M +G + + L
Sbjct: 677 EADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALI 736
Query: 299 QALRDEGMEETAVVLAQKI 317
AL E E A + Q +
Sbjct: 737 CALCKENFIEEAQCIFQTM 755
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 137/303 (45%), Gaps = 3/303 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +N LI+ LC E A +F M P ++Y +++ + ++
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M G P+V++Y +I +C + A+ L M+ KP + LI+G
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L A F + G P TY A++ Y +++DA + +M + G P+
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++TY++++ K EA + +M ++ G P V TY + C N + +A +I+
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVKQ-GLLPNVITYTSFIDGLCRNGRTGLAFKIF 610
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY--FQEMLDIGIRPPGQLFSNLKQALR 302
EM+ R P ++ YS+LI LC E + +DA Y + G P ++ L + L
Sbjct: 611 HEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLC 670
Query: 303 DEG 305
EG
Sbjct: 671 GEG 673
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 149/320 (46%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + + + +LC + A E+ KMKKR P+I+++T L+ G +
Sbjct: 302 GIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIA 361
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+Y +M DG P V+Y +IN C R++ A +F+ M + PS + +I
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A+ F + K G P TYN ++ YC +N+A R+++ M+ G+ P+
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ + G+ E A S+F M + G P TY ++ + A+VD A+ ++
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGM-MEHGISPNHVTYTAIIDGYFNLAKVDDALALF 540
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M G LP Y+ +I+ + + +A + +M+ G+ P +++ L
Sbjct: 541 WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRN 600
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G A + +++K P
Sbjct: 601 GRTGLAFKIFHEMEKRNYFP 620
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 145/302 (48%), Gaps = 2/302 (0%)
Query: 26 VERAQEVFDKMK-KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
V+R + ++ K F + S+T LL G+ + ++Y +M + G P ++++
Sbjct: 147 VKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFN 206
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
MIN C R EA + + + P+ + +LI G L A F + K
Sbjct: 207 TMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD 266
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P + TY+ ++ C R+ +A M++EM + GI P TY I L L AG + EA
Sbjct: 267 GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEA 326
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+ +M +K G P + T+ ++ + + ++A+ ++ +M A G++P Y+ LIN
Sbjct: 327 VELLGKM-KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
LC E + + A F+ ML G P Q ++ + + G + A+V+ K+ K +P
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 325 LV 326
V
Sbjct: 446 NV 447
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 131/283 (46%), Gaps = 1/283 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI+ LC +E A ++ ++M ++ +P + +YTI L E+ +MK
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P++ ++ +I+ +++ A+ L+ +M A P+ + LIN L E R
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A F G P TYN ++ +C I A + D+M K G PN TY+ ++
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLI 454
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K G A + + M + G +P TY ++ F +++ A ++ M G+
Sbjct: 455 YGYCKQGNLNNAMRLLEIM-KGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
P Y+ +I+ + K+DDA F +M++ G P Q ++
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 118/277 (42%), Gaps = 6/277 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I K+ + A+ KM K+ P++ +YT ++G + +++ EM+
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEA--VELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ P++ +Y +I C R ++A L + C+P+ + TL+ GL E R
Sbjct: 615 KRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR 674
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
EA Q +K+G +P Y A++ C ++++ A + M G + Y
Sbjct: 675 CYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKA 734
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L K EEA +F+ M K V + +++ + D+ +++ M++R
Sbjct: 735 LICALCKENFIEEAQCIFQTMLEKHWNSDEV-VWTVLLDGLLKEGETDLCLKLLHVMESR 793
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
Y L L LD A K Q +GI
Sbjct: 794 NCTLNFQTYVMLAREL---SALDCAIKIPQISQQLGI 827
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
MD G + L D+ LI LCK +E AQ +F M ++ ++ D +T+LL+G
Sbjct: 720 MDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDG 773
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 60/153 (39%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +G + + + L+ LC A ++ M+K+ P + Y LL G +
Sbjct: 650 LTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLK 709
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S ++ M GF+ + Y +I A C +EA +F+ M + ++
Sbjct: 710 VESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTV 769
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
L++GL E L+ + R TY
Sbjct: 770 LLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 148/311 (47%), Gaps = 2/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + F+ + +LCK + A+E+F M + PDI SY+ILL G+ +
Sbjct: 328 MTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGR 387
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
MN ++ M D G + I+I+AH DEA+ +F EM+ +P+ + T
Sbjct: 388 FADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYST 447
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ RL++A++ F Q G EP Y++++ +C + A + EM G
Sbjct: 448 LISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKG 507
Query: 181 IG-PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ PN + ++H L GR +A VF + G PT+ T+ ++ +C +++
Sbjct: 508 LHRPNIVFFSSIIHSLCIEGRVMDAQDVFN-LVIHIGDRPTIVTFNSLIDGYCLVGKMEK 566
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + D M + G+ P + +TL++ C K+DD F+EML ++P ++ +
Sbjct: 567 AFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLD 626
Query: 300 ALRDEGMEETA 310
L G A
Sbjct: 627 GLLRAGRTSAA 637
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 143/293 (48%), Gaps = 6/293 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKR--RFDPDIKSYTILLEGWGQQKNLLSM 64
+PD +N +I +LC + A ++ +M K R PD+ S+ ++ G+ +Q +
Sbjct: 192 VPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKA 251
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G PDV +Y +++A C A+ D+A + R+M +P + +I+G
Sbjct: 252 CNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHG 311
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E+ + F + +G P+ T+++ + + C R DA + M G P+
Sbjct: 312 YSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPD 371
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+LH GR + ++F M+ K G I++ +D AM ++
Sbjct: 372 IVSYSILLHGYATEGRFADMNNLFHSMADK-GIVSNCHCINILISAHAKRGMMDEAMLVF 430
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
EM+ +GV P + YSTLI++ C +L DA + F +M+ IGI P ++ +L
Sbjct: 431 TEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSL 483
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 145/294 (49%), Gaps = 2/294 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N ++D LCK+R +++A+ V +M + +PD +Y ++ G+ +
Sbjct: 262 GVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKES 321
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++R+M G PD V++ +++ C R +A E+F+ M P + L++G
Sbjct: 322 AKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHG 381
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+E R ++ F +G N ++ A+ +++A + EM+ G+ PN
Sbjct: 382 YATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPN 441
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ + GR +A F +M G EP + Y ++ FC + + A
Sbjct: 442 VVTYSTLISAFCRMGRLADAMEKFSQMI-SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFI 500
Query: 245 DEMKARGV-LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
EM ++G+ P + +S++I+SLC E ++ DA F ++ IG RP F++L
Sbjct: 501 SEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSL 554
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 142/298 (47%), Gaps = 2/298 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ FN +I K V +A +F++M ++ PD+ +Y +++ + + + V
Sbjct: 231 DVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVL 290
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
R+M D G EPD V+Y +I+ + + + E+ ++FR+M + P F + ++ L
Sbjct: 291 RQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKH 350
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
R +A + F +G P+ +Y+ ++ Y R D + M GI N
Sbjct: 351 GRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCI 410
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+I++ K G +EA VF M + G P V TY ++ FC ++ AM + +M
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEMQGQ-GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI-RPPGQLFSNLKQALRDEG 305
+ G+ P +Y +LI+ C L A ++ EM+ G+ RP FS++ +L EG
Sbjct: 470 SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEG 527
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 150/321 (46%), Gaps = 2/321 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ LI C+ + A E F +M +P+ Y L+ G+ +L+
Sbjct: 437 GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKA 496
Query: 65 NEVYREMKDDGFE-PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E EM G P++V + +I++ C R +A ++F + +P+ F +LI+
Sbjct: 497 KEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLID 556
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G ++ +A G EP+ T N +V YC S +I+D + EM + P
Sbjct: 557 GYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKP 616
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
T TY+IVL L++AGRT A +F M GT + TY+I+++ C N D A+ +
Sbjct: 617 TTVTYNIVLDGLLRAGRTSAAKKMFHEMI-DSGTAVDIDTYKILLKGLCRNDLTDEAITL 675
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ ++ A + + +T+IN+L + ++A F + G+ P + + + L
Sbjct: 676 FHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLK 735
Query: 304 EGMEETAVVLAQKIDKLRKTP 324
EG E A + ++K P
Sbjct: 736 EGSVEEADTMFSSMEKSGCAP 756
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 123/270 (45%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ +I +LC V AQ+VF+ + P I ++ L++G+ + V M
Sbjct: 516 FSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMV 575
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPDVV+ +++ +C + + D+ + LFREM KP+ + +++GL R S
Sbjct: 576 SVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTS 635
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G + TY ++ C + ++A + ++ + + ++
Sbjct: 636 AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMI 695
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K R EEA +F +S G P VSTY +++R V+ A ++ M+ G
Sbjct: 696 NALYKVRRREEANDLFAAIS-TSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGC 754
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P + + +I L + + A Y ++
Sbjct: 755 APSSRLLNDIIRMLLQKGDIVKAGYYMSKV 784
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 5/233 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ N L+ CKS ++ +F +M ++ P +Y I+L+G +
Sbjct: 574 MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGR 633
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM D G D+ +Y I++ C DEA+ LF ++ A +CK I T
Sbjct: 634 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 693
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN L +R EA F G P TY ++ + +A M M K G
Sbjct: 694 MINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV--STYEIVVRMF 231
P++R + ++ L++ G +A MS+ GT ++ ST +++ +F
Sbjct: 754 CAPSSRLLNDIIRMLLQKGDIVKAG---YYMSKVDGTIISLEASTTSLLMSLF 803
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 5/250 (2%)
Query: 65 NEVYREMKDDGFEPDVV-SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
N + RE P V +YGI+++ C A+R D + K T +
Sbjct: 108 NRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLK 167
Query: 124 GLGSEKRLSEALQ-FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-- 180
L KR EA+ + + P+A +YN V+ + C R +A M+ M K G
Sbjct: 168 CLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR 227
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +++ V+H K G +A ++F M +K G P V TY +V C +D A
Sbjct: 228 CSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQK-GVVPDVGTYNSIVDALCKARAMDKA 286
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M +GV P Y+ +I+ ++ K F++M G+ P FS+ +
Sbjct: 287 EFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSS 346
Query: 301 LRDEGMEETA 310
L G + A
Sbjct: 347 LCKHGRSKDA 356
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 79/188 (42%), Gaps = 12/188 (6%)
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
R ++P+ A+ + +DA+ + DE+ + G + R+ + L L +A +
Sbjct: 36 RCWDPQVAFVAAIARVRAGTFCTDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVS 95
Query: 204 -------AYSVFKRMSRK---PGTEP-TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
++F R+ R+ P P TV TY I++ C + D+ + G+
Sbjct: 96 CSNGPALVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGL 155
Query: 253 LPVMHMYSTLINSLCHEDKLDDACK-YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+T + LCH + D+A M ++ P ++ + ++L + + A+
Sbjct: 156 KTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEAL 215
Query: 312 VLAQKIDK 319
+ Q++ K
Sbjct: 216 DMVQRMAK 223
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 152/297 (51%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ ++ L+D LCK+ A+++FD M KR P+I +Y LL+G+ + L+ M
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 355
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G PD + I+I A+ + + D+A+ +F +M P+ + +I
Sbjct: 356 HGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGI 415
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ +A+ +F Q G P YN+++ C + A ++ EM GI N
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ ++ K GR E+ +F+ M R G +P V TY ++ +C ++D AM++
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVR-IGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M + G+ P YSTLIN C +++DA F+EM G+ P ++ + Q L
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 147/304 (48%), Gaps = 4/304 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD---PDIKSYTILLEGWGQ 57
M + G + +N L+ LC + A E+ M R PD+ SYT ++ G+ +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + Y EM D G PDVV+Y +I A C A+ D+A+E+ M P
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ ++++G S + EA+ F + + G EP+ TY+ ++ C + R +A ++ D M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K G+ P TY +L G E + + M R G P + I++ + +V
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPDHYVFSILICAYANQGKV 387
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D AM ++ +M+ +G+ P Y +I LC +++DA YF++M+D G+ P ++++L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 298 KQAL 301
L
Sbjct: 448 IHGL 451
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 157/331 (47%), Gaps = 8/331 (2%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M + G + PD + LI C++ ++ + K+ F D ++T LL+G
Sbjct: 75 MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 58 QKNLL-SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
K +M+ V R M + G P+V SY I++ C R EA+EL M SP
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 117 ---IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ T+ING E +A + + RG P+ TYN+++ A C + ++ A ++
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ M K G+ P+ TY+ +LH +G+ +EA K+M R G EP V TY +++ C
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCK 313
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
N + A +I+D M RG+ P + Y TL+ + L + M+ GI P +
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
FS L A ++G + A+++ K+ + P
Sbjct: 374 FSILICAYANQGKVDQAMLVFSKMRQQGLNP 404
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID+ CK V ++++F+ M + P++ +Y L+ G+ + ++ M
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+ V+Y +IN +C R ++A+ LF+EME++ P + ++ GL +R +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + + + G + E TYN ++ C + +DA +M + + RT++I++
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F S G P TY ++ ++ +++ M+ G
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSN-GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
M + ++ L ++ A Y M+D
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLS-MID 748
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 135/293 (46%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LC ERA+E+ +M R + + +++ ++ ++ +++ M
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+V++Y +IN +C A + DEA++L M + KP+ + TLING R+
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL F + + G P+ TYN ++ + R A + + + G TY+I+L
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K T++A +F+ + + T+ I++ + D A ++ + G+
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P Y + ++ + L++ + F M D G + + + + L G
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 7/285 (2%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD--DGFEPDVVSYG 84
E A+ VFD++ +R I L + +++ R + D PD+ +YG
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF-FGQSKK 143
I+I C A R D + + F L+ GL ++KR S+A+ + +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAY---RMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
G P +YN ++ C R +A MM + R G P+ +Y V++ K G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
+++AYS + M + G P V TY ++ C +D AM + + M GV+P Y+
Sbjct: 212 SDKAYSTYHEMLDR-GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++++ C + +A + ++M G+ P +S L L G
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K + +N LI+ C + ++ A ++ M P+ +Y+ L+ G+ +
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM+ G PD+++Y I++ +R A EL+ + + + +
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL K +ALQ F + EA T+N ++ A R ++A + G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ PN TY ++ ++I G EE +F M
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK ++ LI+ CK +E A +F +M+ PDI +Y I+L+G Q +
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+Y + + G + ++ +Y I+++ C K D+A+++F+ + + K F
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L R EA F G P TY + + + ++ M G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ + ++ L++ G A + + K
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 160/322 (49%), Gaps = 4/322 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ N LI++ C + A V + K + P ++T L+ G +
Sbjct: 36 MDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGK 95
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +M +GF+PDV++YG +IN C ++ EA+ LF +M A P+ + +
Sbjct: 96 IGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSS 155
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI---NDAYRMMDEMR 177
LI+GL EA++ F R P+ T+N +V A C I + A + +EM
Sbjct: 156 LIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMS 215
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ G+ P+T TY+ ++H L GR +A ++F M G P + TY I+ C N ++
Sbjct: 216 QQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVY-GQIPDLVTYRILFDYLCKNHRL 274
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
AM + ++ + P +H+YS +++ +C +L+ A F ++ G+ P + ++ +
Sbjct: 275 AEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIM 334
Query: 298 KQALRDEGMEETAVVLAQKIDK 319
L +G+ A L ++D+
Sbjct: 335 INGLCQQGLLAEASKLFGEMDE 356
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 4/257 (1%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M + R P I ++ LL + K+ ++ +Y++M G + + I+IN+ C R
Sbjct: 1 MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
A + ++ +PS F TLI GL E ++ EALQ F + GF+P+ TY
Sbjct: 61 LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ C ++ +A + +M GI PN TY ++H L G +EA +F M +
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180
Query: 216 GTEPTVSTYEIVVRMFCYNAQV---DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
P T+ +V C + D AM +++EM +G++P Y+TLI+ LCH +L
Sbjct: 181 -IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 239
Query: 273 DDACKYFQEMLDIGIRP 289
DA F EM+ G P
Sbjct: 240 RDAIALFHEMVVYGQIP 256
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + +N LI LC + A +F +M PD+ +Y IL + +
Sbjct: 214 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 273
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + ++ +PD+ Y I+++ C A + A +LF ++ + P +
Sbjct: 274 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 333
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAP-TYNAVVGAY 160
+INGL + L+EA + FG+ + E + + NA G +
Sbjct: 334 MINGLCQQGLLAEASKLFGEMDENDIESYSTFSRNAFKGIF 374
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 155/308 (50%), Gaps = 9/308 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N L+ LC R + A VF++M+ P++++Y+ L++G+ + +
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +EV+ M G P+VV+Y M++ C +++A L M+ NC P+ F T
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I GL R+ A++ F Q G P TYN ++ + R +A+ ++ +M G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I N TY+ +++ AG EA + +M + GT+P T IV+ +C +V++A
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVR-GTKPDAITVNIVIDAYCKQGKVNIA 580
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG--------Q 292
+++ D + A P + Y++LI+ +C +++A Y + ML GI P
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRH 640
Query: 293 LFSNLKQA 300
LFSN+ +
Sbjct: 641 LFSNMGHS 648
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 140/293 (47%), Gaps = 6/293 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F +I + ++ E+A + F +M+ R P +K Y +L+ + +N +Y MK
Sbjct: 114 FISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMK 173
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG EP+V +Y I++ A C R D A +L EM + C P + TLI+ L ++
Sbjct: 174 KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVK 233
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F P P YNA++ C +A++++DEM GI PN +Y ++
Sbjct: 234 EAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTII 288
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L AG E + +V +M + G P + T+ +++ F A+ WD M GV
Sbjct: 289 NALSDAGNVELSLAVLAKMFAR-GCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P + Y+ L++ LC + L DA F +M G P + +S L G
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 149/331 (45%), Gaps = 31/331 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLE-----GW 55
M K G++ + +N L+ LCK+ V+ A ++ +M + DPD SYT L+ G
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231
Query: 56 GQQKNLLSMN-------------------------EVYREMKDDGFEPDVVSYGIMINAH 90
++ L+M+ ++ EM + G +P+V+SY +INA
Sbjct: 232 VKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
A + ++ + +M A C P+ H F +LI G + EAL F+ + + G P
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNV 351
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
YNA++ C + DA + ++M G PN RTY ++ KAG + A V+
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M G P V Y +V + C N+ + A + + M+ P ++T I LC
Sbjct: 412 MITH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSG 470
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++D A K F +M + G P ++ L +L
Sbjct: 471 RVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 141/317 (44%), Gaps = 6/317 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M F +K + +N ++D L + ++ MKK +P++ +Y ILL+ +
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G +PD VSY +I++ C + EA EL A + PS ++
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNA 251
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING+ E EA Q + +G +P +Y ++ A + + + ++ +M G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T+ ++ G + EA + RM R+ G P V Y ++ C + A
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE-GVVPNVVAYNALMHGLCSKRSLGDA 370
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++++M+ G P + YS LI+ LD A + + M+ G P ++ +
Sbjct: 371 VSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV 430
Query: 301 LRDEGMEETAVVLAQKI 317
L M A L + +
Sbjct: 431 LCRNSMFNQAYCLIENM 447
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 144/320 (45%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + +I+ L + +VE + V KM R P++ ++T L++G+ +
Sbjct: 276 GIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEA 335
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G P+VV+Y +++ CS + +AV +F +ME C P+ + LI+G
Sbjct: 336 LDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A + + G P Y +V C + N AY +++ M+ PN
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T T++ + L +GR + A VF +M G P +TY ++ + + A +
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNS-GCFPNTTTYNELLDSLLKDRRFGEAFGLV 514
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M+ RG+ + Y+T+I C L +A + +M+ G +P + + A +
Sbjct: 515 KDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G A+ L ++ + P
Sbjct: 575 GKVNIAIQLMDRLSAGKWHP 594
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 137/298 (45%), Gaps = 10/298 (3%)
Query: 18 DTLCKSRH---VERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
D L + +H + A E F + + F +Y +++E ++ + + + ++MK
Sbjct: 45 DVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKL 104
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+G + +I ++ A ++A++ F M+ KP+ I+ +++ L E R
Sbjct: 105 EGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQM 164
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ KK G EP TYN ++ A C + R++ A++++ EM G P+ +Y ++
Sbjct: 165 INPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLIS 224
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K G+ +EA + + P+V Y ++ C + A ++ DEM +G+
Sbjct: 225 SLCKLGKVKEARELAMSFT------PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGID 278
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+T+IN+L ++ + +M G P F++L + +G A+
Sbjct: 279 PNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEAL 336
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
D+ G P+ +N L+D+L K R A + M+ R + ++ +Y ++ G+
Sbjct: 480 DQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCA 539
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
L E+ +M G +PD ++ I+I+A+C + + A++L + A P +
Sbjct: 540 GMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAY 599
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI+G+ + + EA+ + + G P T+N +V +M + A + +D +
Sbjct: 600 TSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLG 659
Query: 179 CG 180
G
Sbjct: 660 SG 661
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ L +N +I C + + A E+ KM R PD + I+++ + +Q
Sbjct: 517 MEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGK 576
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + + PD+++Y +I+ C+ +EA+ R M + P+ +
Sbjct: 577 VNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNV 636
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFE 147
L+ L S S A+QF GFE
Sbjct: 637 LVRHLFSNMGHSGAVQFLDAVLGSGFE 663
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 164/348 (47%), Gaps = 36/348 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ LI+ CK R + A++V +M++R + +Y +L+ G + +
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++M+D G PD +YG +IN C ++R +EA L EM KP+ ++ LI+G
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 231
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC----------------------- 161
E EA + + G +P TY+ +V C
Sbjct: 232 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 291
Query: 162 ---WSMRI---------NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+++ I DA+R++ EM GI PN TY I++H L ++G E+A + +
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M+ K G +P Y ++ +C V +A I+D+M VLP ++ Y++LI L
Sbjct: 352 EMTTK-GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 410
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+++++ KYF +M + G+ P +S L G E+A L Q++
Sbjct: 411 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 146/344 (42%), Gaps = 36/344 (10%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+DT KS V+ A EV M+ R P I+ LL+ + + + +V M G
Sbjct: 53 LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PDV +Y +I A+C + +D A ++ EM C + + LI GL + EA
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + G P+ TY A++ C S R N+A ++DEM + PN Y ++
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM---------------- 239
++ G +EA+ + K M G +P TY+ +VR C Q+D
Sbjct: 233 MREGNADEAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 291
Query: 240 -------------------AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
A R+ EM+ G+ P ++ YS +I+ LC + + A +
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM G++P +++ L EG A + K+ K+ P
Sbjct: 352 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 395
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 151/367 (41%), Gaps = 71/367 (19%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ L+ LCK ++RA + +M + PD +Y +++EG + N
Sbjct: 248 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHN 307
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS------ 114
+ EM++ G P+V +Y IMI+ C + ++A +L EM KP+
Sbjct: 308 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 367
Query: 115 ---------------------------PHIFC--TLINGLGSEKRLSEALQFFGQSKKRG 145
P ++C +LI GL R+ E+ ++F Q ++RG
Sbjct: 368 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN--------------------- 184
P TY+ ++ Y + + A +++ M G+ PN
Sbjct: 428 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 487
Query: 185 --------------TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
R Y I++H+L +G E A+ V + K G+ P V Y ++
Sbjct: 488 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEI-EKNGSVPDVHVYSSLISG 546
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C A + A I DEM +GV P + Y+ LI+ LC + A F +L G+ P
Sbjct: 547 LCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPN 606
Query: 291 GQLFSNL 297
+++L
Sbjct: 607 CVTYTSL 613
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 150/359 (41%), Gaps = 36/359 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----- 55
M+ +GL + + LI+ LCKSR A+ + D+M P++ Y L++G+
Sbjct: 178 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 237
Query: 56 --------------GQQKNLLSMNEVYR----------------EMKDDGFEPDVVSYGI 85
G Q N ++ + + R +M D PD ++Y +
Sbjct: 238 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I H +A L EME P+ + + +I+GL +A + +G
Sbjct: 298 IIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P A Y ++ YC ++ A + D+M K + P+ Y+ ++ L K GR EE+
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 417
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
F +M + G P TY ++ + N ++ A ++ M G+ P +Y L+ S
Sbjct: 418 KYFAQMQER-GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 476
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
D ++ F+ MLD G+ +++ L L G E A + +I+K P
Sbjct: 477 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVP 535
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 143/317 (45%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + LI C+ +V A E+FDKM K PD+ Y L+ G +
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +M++ G P+ +Y +I+ + + A +L + M T KP+ I+
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ + + F +G + Y ++ S + A+R++ E+ K G
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNG 532
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y ++ L K E+A+ + MS+K G +P + Y ++ C + + A
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKK-GVDPNIVCYNALIDGLCKSGDISYA 591
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ + A+G++P Y++LI+ C + +A + EML GI P ++S L
Sbjct: 592 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 651
Query: 301 LRDEGMEETAVVLAQKI 317
G E A+ L +++
Sbjct: 652 CSSAGDLEQAMFLIEEM 668
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 144/316 (45%), Gaps = 6/316 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
DK LPD +N LI L K VE + + F +M++R P+ +Y+ L+ G+ +
Sbjct: 386 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 445
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+L S ++ + M D G +P+ V Y ++ ++ + ++ F+ M I+
Sbjct: 446 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIY 505
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LI+ L S + A + + +K G P+ Y++++ C + A+ ++DEM K
Sbjct: 506 GILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSK 565
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ PN Y+ ++ L K+G A +VF + K G P TY ++ C +
Sbjct: 566 KGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK-GLVPNCVTYTSLIDGSCKVGDIS 624
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +++EM A G+ P +YS L L+ A +EM G F+NL
Sbjct: 625 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLV 683
Query: 299 QALRDEG-MEETAVVL 313
G M+ET +L
Sbjct: 684 DGFCKRGKMQETLKLL 699
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 133/299 (44%), Gaps = 18/299 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K G ++ ++ LI LCK+ E+A + D+M K+ DP+I Y L++G + +
Sbjct: 528 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 587
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ + G P+ V+Y +I+ C A L+ EM AT P ++
Sbjct: 588 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 647
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L G S L +A+ + RG ++N +V +C ++ + +++ + G
Sbjct: 648 LTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 706
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT-----------------VST 223
+ PN T + ++ L +AG+ E +++F + +K +
Sbjct: 707 LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV 766
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ ++R C +D A+ + D + A+ Y ++++LC + KL +A +EM
Sbjct: 767 VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 825
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 2/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ LI K+ +E A+++ +M P+ Y LLE + + +
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 482
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ ++ M D G D YGI+I+ S+ + A + E+E P H++ +
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL +A + K+G +P YNA++ C S I+ A + + + G
Sbjct: 543 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 602
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ K G A+ ++ M G P Y ++ ++ A
Sbjct: 603 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEM-LATGITPDAFVYSVLTTGCSSAGDLEQA 661
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + +EM RG + ++ L++ C K+ + K ++ G+ P N+
Sbjct: 662 MFLIEEMFLRGHASI-SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISG 720
Query: 301 LRDEG 305
L + G
Sbjct: 721 LSEAG 725
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 130/301 (43%), Gaps = 2/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + L+++ KS +E+ F M + D + Y IL+ N+ +
Sbjct: 462 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 521
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V E++ +G PDV Y +I+ C ++A + EM P+ + LI+G
Sbjct: 522 FRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 581
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +S A F +G P TY +++ C I++A+ + +EM GI P+
Sbjct: 582 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 641
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ AG E+A + + M + ++S++ +V FC ++ +++
Sbjct: 642 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLR--GHASISSFNNLVDGFCKRGKMQETLKLL 699
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ RG++P +I+ L KL + F E+ + FS+L + ++
Sbjct: 700 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 759
Query: 305 G 305
G
Sbjct: 760 G 760
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ FN L+D CK ++ ++ + R P+ + ++ G + L ++ ++
Sbjct: 675 SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIF 734
Query: 69 REMKDDGFEP----------DVVSYGI--------MINAHCSAKRYDEAVELFREMEATN 110
E++ E D+++ G MI HC D+A+ L + A +
Sbjct: 735 VELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKS 794
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
+ +++ L + +LSEAL + KRG PT A++G + W R
Sbjct: 795 APMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG--NLQPTLVALLGIF-WFRR 846
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 166/325 (51%), Gaps = 1/325 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
++ L ++ + LI C++R+++ A VFD+M K DP+ +Y+ L+ G + +
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ EM + G EP V +Y + I A C+ + +EA+EL M+ C+P+ + LI
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 345
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL +L A+ + + K G P TYNA++ C R + A ++ M G
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL 405
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
NT+TY+ ++ L G E+A +F++M K G PTV TY ++ + V+ A R
Sbjct: 406 ANTQTYNEIIKGLCLGGDIEKAMVLFEKM-LKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D MK G P Y+ L++ KL+ A YFQEM++ G+ P ++ L
Sbjct: 465 LLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHS 524
Query: 303 DEGMEETAVVLAQKIDKLRKTPLVD 327
+G + A+ L ++++++ P V+
Sbjct: 525 KDGKVDIALSLLKRMEEMGCNPNVE 549
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 159/334 (47%), Gaps = 12/334 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N LI+ +V A + D MK+ +PD +Y L+ G+ +
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGK 493
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L S + ++EM + G P+ VSY +I+ H + D A+ L + ME C P+ +
Sbjct: 494 LESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNA 553
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL E R SEA + + ++G P TY ++ C + R A+++ +M K
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY +++ L + G+ +EA +RMS + G EPT+ TY +V C + A
Sbjct: 614 CLPNLYTYSSLIYGLCQEGKADEA----ERMS-EIGCEPTLDTYSTLVSGLCRKGRFYEA 668
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ +MK RG P +Y +L+ + C ++D A K F + G + ++ L A
Sbjct: 669 EQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICA 728
Query: 301 LRDEGMEETAVVLAQKI-------DKLRKTPLVD 327
L G E A L + D++ T LVD
Sbjct: 729 LCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 762
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ G L N L+ L K VE A+ ++ +M P + ++ L+ ++
Sbjct: 154 ISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 213
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ PDV +Y +I HC + D A +F M C P+ + T
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYST 273
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL +E R+ EAL + ++G EP TY + A C +A ++ M+K G
Sbjct: 274 LINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRG 333
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +TY ++ L + G+ E A ++ +M K G P TY ++ C + A
Sbjct: 334 CRPNVQTYTALISGLSRLGKLEVAIGLYHKM-LKEGLVPNTVTYNALINELCVGGRFSTA 392
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++I+ M+ G L Y+ +I LC ++ A F++ML +G P ++ L
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 301 LRDEGMEETAVVL 313
+G A L
Sbjct: 453 YLTKGNVNNAARL 465
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 157/359 (43%), Gaps = 36/359 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFD-------------------------- 34
M K G ++ LI+ LC V+ A ++ +
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318
Query: 35 ---------KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+MKKR P++++YT L+ G + L +Y +M +G P+ V+Y
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C R+ A+++F ME + + +I GL + +A+ F + K G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P TYN ++ Y +N+A R++D M++ G P+ TY+ ++ K G+ E A
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
F+ M + G P +Y ++ + +VD+A+ + M+ G P + Y+ +IN
Sbjct: 499 FYFQEMV-ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVING 557
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L E++ +A K +M++ G+ P ++ L L G + A + ++K + P
Sbjct: 558 LSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLP 616
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
++ R F P ++++ ++ + + + E+ GF + S ++ +
Sbjct: 119 VRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEM 178
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+ A L+++M + +PS F TLIN L + ++ EA Q + P+ TY +
Sbjct: 179 VEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTS 238
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ +C + ++ A+ + D M K G PN+ TY +++ L GR +EA + + M K
Sbjct: 239 LILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK- 297
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G EPTV TY + + C + A+ + MK RG P + Y+ LI+ L KL+ A
Sbjct: 298 GIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVA 357
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ +ML G+ P ++ L L G TA+
Sbjct: 358 IGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTAL 393
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 109/225 (48%), Gaps = 5/225 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LID LC++ + A ++F M+KR+ P++ +Y+ L+ G Q+
Sbjct: 578 GLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG---KA 634
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+E R M + G EP + +Y +++ C R+ EA +L ++M+ P I+ +L+
Sbjct: 635 DEAER-MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIA 693
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ AL+ F + +GF+ Y A++ A C + ++ +A + D M + +
Sbjct: 694 HCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNAD 753
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ +++ L+K G + + M K T P + TY I+ R
Sbjct: 754 EIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT-PNIQTYVILGR 797
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 155/306 (50%), Gaps = 3/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G + F+ +I L + R AQ FD +K R F+PD+ YT L+ GW +
Sbjct: 212 MEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGE 270
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V++EMK G EP+V +Y I+I+A C + A ++F +M + C P+ F
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ R + LQ + Q KK G EP+ TYN ++ A+C + +A ++++ M K
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N T++ + ++ K A+ ++ +M + EP TY I++RMF + DM
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKM-MEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG-IRPPGQLFSNLKQ 299
+++ EM + V P ++ Y L+ C ++A K F+EM++ + P L+ +
Sbjct: 450 LKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLA 509
Query: 300 ALRDEG 305
LR G
Sbjct: 510 QLRRAG 515
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 150/315 (47%), Gaps = 5/315 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D + K P +N +ID K R + A + D MK R + I+++TIL+ + +
Sbjct: 144 DDYDHKSPHP-YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLA 202
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ M+D G PD +++ I+I+ +R EA F ++ +P ++ L
Sbjct: 203 SEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNL 261
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+ G +SEA + F + K G EP TY+ V+ A C +I+ A+ + +M G
Sbjct: 262 VRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN T++ ++ +KAGRTE+ V+ +M +K G EP TY ++ C + ++ A+
Sbjct: 322 APNAITFNNLMRVHVKAGRTEKVLQVYNQM-KKLGCEPDTITYNFLIEAHCRDENLENAV 380
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ + M + ++T+ + + ++ A + + +M++ P ++ L +
Sbjct: 381 KVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF 440
Query: 302 RDEGMEETAVVLAQK 316
G + T +VL K
Sbjct: 441 --VGSKSTDMVLKMK 453
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 117/249 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ +ID LC+ + RA +VF M P+ ++ L+ + +
Sbjct: 285 GIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKV 344
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+VY +MK G EPD ++Y +I AHC + + AV++ M C+ + F T+
Sbjct: 345 LQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRY 404
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ ++ A + + + + EP TYN ++ + S + +M EM + PN
Sbjct: 405 IEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPN 464
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ G AY +FK M + P++S YE+V+ Q+ +
Sbjct: 465 VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELV 524
Query: 245 DEMKARGVL 253
++M +G++
Sbjct: 525 EKMIQKGLV 533
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
SPH + +I+ G ++ A K R E T+ ++ Y + ++A
Sbjct: 150 SPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ M G P+ + IV+ +L + R EA S F S K EP V Y +VR +C
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFD--SLKDRFEPDVIVYTNLVRGWCR 267
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
++ A +++ EMK G+ P ++ YS +I++LC ++ A F +MLD G P
Sbjct: 268 AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+NL + G E + + ++ KL P
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCEP 358
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 158/304 (51%), Gaps = 2/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ ++ +N LI LC A + M +R+ +P++ +++ L++ + ++
Sbjct: 281 METKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGK 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++Y EM +PD+ +Y +IN C R DEA +F M + +C P+ + T
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + +RG TYN ++ + + A ++ +M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L K G+ E+A VF+ + +K EP + TY I++ C +V+
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + +Y+T+I+ C + ++A F+EM + G P ++ L +A
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 579
Query: 301 -LRD 303
LRD
Sbjct: 580 RLRD 583
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 160/316 (50%), Gaps = 13/316 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M+K ++ ++ +N +ID LCK +H++ A +F+KM+ + PD+ +Y L+
Sbjct: 246 MEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGR 305
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W LLS N + R++ P+VV++ +I+A + EA +L+ EM + P
Sbjct: 306 WSDASRLLS-NMIERKI-----NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +LING RL EA F + P TYN ++ +C + R+ + +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM + G+ NT TY+ ++ L +AG + A +FK+M G P + TY I++ C
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV-SDGVPPDIITYSILLDGLCKY 478
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+++ A+ +++ ++ + P ++ Y+ +I +C K++D F + G++P ++
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538
Query: 295 SNLKQALRDEGMEETA 310
+ + +G++E A
Sbjct: 539 TTMISGFCRKGLKEEA 554
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 145/289 (50%), Gaps = 1/289 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ +FN+L+ + K + + + ++M+ R D+ SY IL+ + ++ L V
Sbjct: 79 SIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPD+V+ ++N +C +KR +AV L +M KP F TLI+GL
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLH 198
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ SEA+ Q +RG +P+ TY AVV C I+ A ++ +M K I + Y
Sbjct: 199 NKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ L K ++A+++F +M K G P V TY ++ C + A R+ M
Sbjct: 259 NTIIDGLCKYKHIDDAFALFNKMETK-GIRPDVFTYNSLISCLCNYGRWSDASRLLSNMI 317
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R + P + +S LI++ E KL +A K + EM+ I P +S+L
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 147/312 (47%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + +L +N LI+ C+ + A V KM K ++PDI + + LL G+ K
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKR 165
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G++PD V++ +I+ + EAV L +M C+P +
Sbjct: 166 ISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGA 225
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + AL + +K E + YN ++ C I+DA+ + ++M G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKG 285
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ ++ L GR +A + M + P V T+ ++ F ++ A
Sbjct: 286 IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK-INPNVVTFSALIDAFVKEGKLVEA 344
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--- 297
+++DEM R + P + YS+LIN C D+LD+A F+ M+ P ++ L
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 298 --KQALRDEGME 307
K +EGME
Sbjct: 405 FCKAKRVEEGME 416
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 159/358 (44%), Gaps = 34/358 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + ++ + L++ C S+ + A + D+M + + PD ++ L+ G
Sbjct: 141 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNK 200
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +M G +PD+V+YG ++N C D A+ L ++ME + I+ T
Sbjct: 201 ASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 260
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL K + +A F + + +G P+ TYN+++ C R +DA R++ M +
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP------------------------- 215
I PN T+ ++ +K G+ EA ++ M ++
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 216 ---------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
P V TY +++ FC +V+ M ++ EM RG++ Y+TLI L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
D A K F++M+ G+ P +S L L G E A+V+ + + K + P
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID K + A++++D+M KR DPDI +Y+ L+ G+ L ++ M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+VV+Y +I C AKR +E +ELFREM + + TLI GL
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + G P+ TY+ ++ C ++ A + + ++K + P+ TY+I++
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAG+ E+ + +F +S K G +P V Y ++ FC + A ++ EMK G
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
LP Y+TLI + + + + +EM G S + L D +E++
Sbjct: 567 LPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 1/280 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A +F +M + R P I + LL + K + + M++ D+ SY I
Sbjct: 61 LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C + A+ + +M +P +L+NG KR+S+A+ Q + G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++P+ T+N ++ + ++A ++D+M + G P+ TY V++ L K G + A
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
S+ K+M K E V Y ++ C +D A ++++M+ +G+ P + Y++LI+
Sbjct: 241 SLLKKM-EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC+ + DA + M++ I P FS L A EG
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEG 339
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 79/153 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ L+D LCK +E+A VF+ ++K + +PDI +Y I++EG + +
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + G +P+V+ Y MI+ C +EA LFREM+ P + TLI
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 579
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ + + + + + GF +A T + V+
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N L++ LCK +E A ++ K+ PD+ +YT L++G G++K
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 356
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++EM G D V Y +I + +A +++ M + C P T+I+G
Sbjct: 357 YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 416
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ A++ F + RG P Y+A++ C + +++ A M+ +M+K P+
Sbjct: 417 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 476
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+I++ L K+G E A + F M + G +P V TY I++ FC D A ++
Sbjct: 477 TITYNILIDGLCKSGDVEAARAFFDEM-LEAGCKPDVYTYNILISGFCKAGNTDAACGVF 535
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
D+M + + Y LI+ LC +L A YFQ M
Sbjct: 536 DDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHM 573
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 143/300 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + LID L K + A ++F +M R D YT L+ Q +
Sbjct: 51 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 110
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ VY+ M G PDVV+ MI+ A R AV +F+ MEA P+ ++ LI+G
Sbjct: 111 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 170
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +++ AL+ Q KK P+ TYN ++ C S + A DEM + G P+
Sbjct: 171 LCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPD 230
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I++ KAG T+ A + + G + TY +V N +++ A+ +
Sbjct: 231 VYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALM 290
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+++ A G P + Y+ L+N LC +L++A ++++D G P +++L L E
Sbjct: 291 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 350
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 150/304 (49%), Gaps = 5/304 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL-LSMNE 66
PD +N LID LCKS VE A+ FD+M + PD+ +Y IL+ G+ + N + +
Sbjct: 194 PDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHS 253
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ +E +G D+ +Y +++ K+ +EAV L ++ A C P+ + L+NGL
Sbjct: 254 LAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLC 313
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL EA+ + G P+ TY +++ R +AY++ EM G+ +T
Sbjct: 314 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 373
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y ++ L++ G+ +A SV+K M+ G P V T ++ ++ A+RI+
Sbjct: 374 CYTALIRELLQTGKIPQASSVYKTMTSH-GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKS 432
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M+ARG+ P +YS LI+ LC K+D A + +M P ++ L L G
Sbjct: 433 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 492
Query: 307 EETA 310
E A
Sbjct: 493 VEAA 496
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + LID L K + A ++F +M R D YT L+ Q +
Sbjct: 332 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 391
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ VY+ M G PDVV+ MI+ A R AV +F+ MEA P+ ++ LI+G
Sbjct: 392 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 451
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +++ AL+ Q KK P+ TYN ++ C S + A DEM + G P+
Sbjct: 452 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 511
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I++ KAG T+ A VF MS V TY ++ C Q+ A +
Sbjct: 512 VYTYNILISGFCKAGNTDAACGVFDDMSSSR-CSANVVTYGALISGLCKRRQLTKASLYF 570
Query: 245 DEMKARG 251
MK RG
Sbjct: 571 QHMKERG 577
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 150/345 (43%), Gaps = 44/345 (12%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+E A + +K+ P I +Y LL G + L ++ R++ D+G PDVV+Y
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 86 MINAHCSAKRYDEAVELFREME-----------------------------------ATN 110
+I+ KR EA +LF+EM +
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
C P T+I+GL R+ A++ F + RG P Y+A++ C + +++ A
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
M+ +M+K P+T TY++++ L K+G E A + F M + G +P V TY I++
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEM-LEAGCKPDVYTYNILISG 240
Query: 231 FCYNAQVDMAMR-IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
FC D A + E G +H Y+ +++ L K+++A +++ G P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKI-------DKLRKTPLVD 327
++ L L G E A+ L +KI D + T L+D
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 345
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 150/360 (41%), Gaps = 37/360 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ + +ID L K+ + A +F M+ R P+ Y+ L+ G + +
Sbjct: 117 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +MK PD ++Y ++I+ C + + A F EM CKP + +
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236
Query: 121 LING------------------------------------LGSEKRLSEALQFFGQSKKR 144
LI+G L K++ EA+ +
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITAN 296
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P TYNA++ C R+ +A ++ ++ G P+ TY ++ L K R+ EA
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 356
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
Y +FK M+ + TV Y ++R ++ A ++ M + G +P + ST+I+
Sbjct: 357 YKLFKEMALRGLALDTVC-YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 415
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L ++ A + F+ M G+ P ++S L L + A+ + ++ K TP
Sbjct: 416 GLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 475
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 1/216 (0%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+ +EAV L ++ A C P+ + L+NGL RL EA+ + G P+ TY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+++ R +AY++ EM G+ +T Y ++ L++ G+ +A SV+K M+
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P V T ++ ++ A+RI+ M+ARG+ P +YS LI+ LC K+D
Sbjct: 121 -GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
A + +M P ++ L L G E A
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAA 215
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL ++ LI LCK+R ++ A E+ +MKK PD +Y IL++G + +
Sbjct: 433 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 492
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EM + G +PDV +Y I+I+ C A D A +F +M ++ C + +
Sbjct: 493 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGA 552
Query: 121 LINGLGSEKRLSEALQFFGQSKKRG 145
LI+GL ++L++A +F K+RG
Sbjct: 553 LISGLCKRRQLTKASLYFQHMKERG 577
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 73/180 (40%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ + +ID L K+ + A +F M+ R P+ Y+ L+ G + +
Sbjct: 398 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 457
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +MK PD ++Y I+I+ C + + A F EM CKP + +
Sbjct: 458 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 517
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G A F TY A++ C ++ A M++ G
Sbjct: 518 LISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 147/298 (49%), Gaps = 1/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+D LCK V A +V D M +R +PD+ +YT L++G + + ++V+ M
Sbjct: 287 FTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMV 346
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V+SY +IN +C +R D+A+ LF EM P+ + TLI+GL RL
Sbjct: 347 RKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLR 406
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ F + G P+ TY ++ C + ++ A M+ + + P+ ++Y+IV+
Sbjct: 407 DAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVI 466
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + G E A +F +S K G P V TY I++ C + A +++ EM G
Sbjct: 467 DGMCRVGELEAAGDLFSSLSSK-GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGC 525
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P Y+ + ++ A + QEML G + + + L D+G++++
Sbjct: 526 SPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSV 583
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 153/324 (47%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G+ ++ +I++ C V+ V K+ K PD ++T L+ G +
Sbjct: 100 MDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGK 159
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +GF+P+ V+YG +I+ C A+ L R M NC+P+ + T
Sbjct: 160 IGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNT 219
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L +++++EAL F + +G P TYN+++ C +M+EM
Sbjct: 220 IIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK 279
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + ++ L K G A+ V M ++ G EP V TY ++ C +++D A
Sbjct: 280 IMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQR-GVEPDVVTYTALMDGHCLRSEMDEA 338
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++D M +G P + YSTLIN C ++D A F+EM + P ++ L
Sbjct: 339 DKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHG 398
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G A+ L ++ + P
Sbjct: 399 LCHVGRLRDAIALFHEMVASGQIP 422
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 152/313 (48%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I LCK + + ++M + P++ +T L++ ++ +
Sbjct: 244 GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIA 303
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V M G EPDVV+Y +++ HC DEA ++F M C P+ + TLING
Sbjct: 304 HDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLING 363
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+R+ +A+ F + +R P TYN ++ C R+ DA + EM G P+
Sbjct: 364 YCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPD 423
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+L +L K ++A ++ K + P + +Y IV+ C +++ A ++
Sbjct: 424 LVTYRILLDYLCKTRHLDQAMAMLKAI-EGSNLAPDIQSYNIVIDGMCRVGELEAAGDLF 482
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ ++G+ P + Y+ +IN LC + L +A K F+EM G P ++ + +
Sbjct: 483 SSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRN 542
Query: 305 GMEETAVVLAQKI 317
+A+ L Q++
Sbjct: 543 NETLSAIQLLQEM 555
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 147/323 (45%), Gaps = 7/323 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID L K R V A +F +M + P++ +Y ++ G + + + EM
Sbjct: 217 YNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMV 276
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D P+VV + +++A C A ++ M +P + L++G +
Sbjct: 277 DSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMD 336
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F ++G P +Y+ ++ YC RI+ A + +EM + + PN TY+ ++
Sbjct: 337 EADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLI 396
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L GR +A ++F M G P + TY I++ C +D AM + ++ +
Sbjct: 397 HGLCHVGRLRDAIALFHEMV-ASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNL 455
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ +I+ +C +L+ A F + G+ P ++ + L +G+ A
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATK 515
Query: 313 LAQKIDKLRKTP------LVDRG 329
L ++++ +P L+ RG
Sbjct: 516 LFREMNTDGCSPDDCTYNLITRG 538
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 3/281 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A F++M + P + + +L K+ ++ + ++M G DV + I
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN+ C R D + ++ +P F TLI GL E ++ EAL F + G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+P TY ++ C A R++ M + PN TY+ ++ L K + EA
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++F M K G P VSTY ++ C ++ + +EM ++P + +++TL+++
Sbjct: 235 NIFSEMIAK-GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDA 293
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--KQALRDE 304
LC E + A M+ G+ P ++ L LR E
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSE 334
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ LI+ CK + +++A +F++M +R P+I +Y L+ G
Sbjct: 345 MVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGR 404
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM G PD+V+Y I+++ C + D+A+ + + +E +N P +
Sbjct: 405 LRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNI 464
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G+ L A F +G P+ TY ++ C + +A ++ EM G
Sbjct: 465 VIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDG 524
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
P+ TY+++ ++ T A + + M + G ST ++V M
Sbjct: 525 CSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGR-GFSADASTITLIVEML 574
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 165/332 (49%), Gaps = 15/332 (4%)
Query: 1 MDKF-GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M+ F G + + +F L+DTLCK ++ + A EVF+K +K +++P+ K YT+L+ GW +
Sbjct: 163 MEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNK-RKYKYEPNEKMYTVLIYGWCKVN 221
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAK------RYDEAV----ELFREMEAT 109
+ ++M G EP++V+Y I++N C R+D V +L +EM
Sbjct: 222 RNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEMHQR 281
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+P + +++ + L F K+RG P TY +V+ R++DA
Sbjct: 282 GIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRLDDA 341
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT--EPTVSTYEIV 227
++DEM G+ P+ TY+ A ++ +M + PG+ P + TY I+
Sbjct: 342 ESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKM-KAPGSPATPDIHTYNIL 400
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ MF Q D M++W++M V P ++ Y+ L++ LC K +AC++F EM++ G
Sbjct: 401 LGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGF 460
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
P F L + L M T L +++D+
Sbjct: 461 LPQKITFETLYRGLIQADMLRTWRRLKKRVDE 492
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
A Y+AVV A + + + A+R++ E G RT+ ++ + AG T +A F
Sbjct: 103 ADAYDAVVDALGRARQFDAAWRLVVEAAADGAA-TPRTFAVLARRYVAAGMTRQAVRAFD 161
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M G EP + + ++ C +A ++++ K + P MY+ LI C
Sbjct: 162 DMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYK-YEPNEKMYTVLIYGWCKV 220
Query: 270 DKLDDACKYFQEMLDIGIRP 289
++ D A K+ ++M+ GI P
Sbjct: 221 NRNDMAQKFLKDMIYHGIEP 240
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 6/283 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N L++ LCK +E A ++ K+ PD+ +YT L++G G++K
Sbjct: 289 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 348
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++EM G D V Y +I + +A +++ M + C P T+I+G
Sbjct: 349 YKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 408
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ A++ F + RG P Y+A++ C + +++ A M+ +M+K P+
Sbjct: 409 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 468
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+I++ L K+G E A + F M + G +P V TY I++ C D A +
Sbjct: 469 TITYNILIDGLCKSGDVEAARAFFDEM-LEAGCKPDVYTYNILISGLCKAGNTDAACGVL 527
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
D+M + +YS+L++ LC KL+ C F EM G+
Sbjct: 528 DDMSSS-----RFVYSSLVDGLCKSGKLEGGCMLFHEMERSGV 565
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 140/301 (46%), Gaps = 8/301 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + LID L K + A ++F +M R D YT L+ G Q +
Sbjct: 324 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQA 383
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ VY+ M G PDVV+ MI+ A R AV +F+ MEA P+ ++ LI+G
Sbjct: 384 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 443
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +++ AL+ Q KK P+ TYN ++ C S + A DEM + G P+
Sbjct: 444 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 503
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I++ L KAG T+ A V MS + Y +V C + +++ ++
Sbjct: 504 VYTYNILISGLCKAGNTDAACGVLDDMS------SSRFVYSSLVDGLCKSGKLEGGCMLF 557
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM+ GV + LI LC +++D+A F + G+ P ++++ AL
Sbjct: 558 HEMERSGVAN-SQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHP-YAYNSIISALIKS 615
Query: 305 G 305
G
Sbjct: 616 G 616
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 146/309 (47%), Gaps = 2/309 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ FG+ L N ++ LCKS V A + F+ + +R +++IL+ G + +
Sbjct: 182 EDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAV-RRSMPVSAATFSILINGLVKAGMM 240
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ + + +E +G D+ +Y ++N K+ EAV L ++ A C P+ + L
Sbjct: 241 IQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNAL 300
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+NGL RL EA+ + G P+ TY +++ R +AY++ EM G+
Sbjct: 301 LNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGL 360
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
+T Y ++ L++ G+ +A SV+K M+ G P V T ++ ++ A+
Sbjct: 361 ALDTVCYTALIRGLLQTGKIPQASSVYKTMTSH-GCVPDVVTLSTMIDGLSKAGRIGAAV 419
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
RI+ M+ARG+ P +YS LI+ LC K+D A + +M P ++ L L
Sbjct: 420 RIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGL 479
Query: 302 RDEGMEETA 310
G E A
Sbjct: 480 CKSGDVEAA 488
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 6/315 (1%)
Query: 1 MDKF-GLKQELP----DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW 55
MD F +++ +P F+ LI+ L K+ + +A + + DI +YT ++
Sbjct: 210 MDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWL 269
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
+ K + + ++ +G P + +Y ++N C R +EA++L R++ C P
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 329
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ +LI+GLG EKR EA + F + RG + Y A++ + +I A +
Sbjct: 330 VTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKT 389
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M G P+ T ++ L KAGR A +FK M + G P Y ++ C
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR-GLAPNEVVYSALIHGLCKAR 448
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
++D A+ + +MK P Y+ LI+ LC ++ A +F EML+ G +P ++
Sbjct: 449 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYN 508
Query: 296 NLKQALRDEGMEETA 310
L L G + A
Sbjct: 509 ILISGLCKAGNTDAA 523
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 143/327 (43%), Gaps = 34/327 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + + LI L ++ + +A V+ M PD+ + + +++G +
Sbjct: 355 MASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR 414
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +++ M+ G P+ V Y +I+ C A++ D A+E+ +M+ C P +
Sbjct: 415 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 474
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD------ 174
LI+GL + A FF + + G +P+ TYN ++ C + + A ++D
Sbjct: 475 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR 534
Query: 175 ------------------------EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
EM + G+ N++T ++ HL KA R +EA S+F
Sbjct: 535 FVYSSLVDGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNA 593
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
+ RK G P Y ++ + +V+ ++ EM R P Y+ L+N + +
Sbjct: 594 I-RKEGM-PHPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGAN 650
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNL 297
++D A Y+ EM G PP + L
Sbjct: 651 RMDRAHYYYLEMTGRGYVPPVSILHKL 677
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 147/357 (41%), Gaps = 36/357 (10%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FG + + N L+D +++ A + F PD++++ +L+ G+ +
Sbjct: 112 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPE 171
Query: 63 SMNEVYREMKDD-GFEPDV----------------------------------VSYGIMI 87
V REM++D G P + ++ I+I
Sbjct: 172 EAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILI 231
Query: 88 NAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
N A +A L +E C H + ++N L K++ EA+ + G
Sbjct: 232 NGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCT 291
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P TYNA++ C R+ +A ++ ++ G P+ TY ++ L K R+ EAY +
Sbjct: 292 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 351
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
FK M+ + TV Y ++R ++ A ++ M + G +P + ST+I+ L
Sbjct: 352 FKEMASRGLALDTV-CYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 410
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++ A + F+ M G+ P ++S L L + A+ + ++ K TP
Sbjct: 411 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTP 467
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 137/274 (50%), Gaps = 14/274 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL ++ LI LCK+R ++ A E+ +MKK PD +Y IL++G + +
Sbjct: 425 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 484
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EM + G +PDV +Y I+I+ C A D A + +M + S ++ +
Sbjct: 485 VEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS-----SRFVYSS 539
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL +L F + ++ G + T ++ C + R+++A + + +RK G
Sbjct: 540 LVDGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 598
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ Y+ ++ LIK+G+ E +V++ M+R +P TY ++ ++D A
Sbjct: 599 M-PHPYAYNSIISALIKSGKVNEGQAVYQEMTR--WWKPDRVTYNALLNGMIGANRMDRA 655
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
+ EM RG +P + + L +D+L D
Sbjct: 656 HYYYLEMTGRGYVPPVSILHKLA-----DDRLKD 684
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 130/280 (46%), Gaps = 5/280 (1%)
Query: 29 AQEVFDKMKKRRF--DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
A E+F + RF + + LL+ + + K + + F PDV ++ ++
Sbjct: 101 AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVL 160
Query: 87 INAHCSAKRYDEAVELFREMEAT-NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
I +C A+ +EA + REME PS +++GL ++ A+ F ++ +R
Sbjct: 161 ITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRS 219
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
A T++ ++ + + A+ + E G + TY +++ L K + +EA
Sbjct: 220 MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAV 279
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ ++++ G PT++TY ++ C +++ A+ + ++ G P + Y++LI+
Sbjct: 280 ALMEKITAN-GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 338
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
L E + +A K F+EM G+ ++ L + L G
Sbjct: 339 LGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTG 378
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 3/188 (1%)
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
S + GF+ T NA++ + + R +A ++ P+ T+++++ A
Sbjct: 109 SSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAR 168
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV-MHM 258
EEA++V + M G P++ T+ +V+ C + +V AM ++ + R +PV
Sbjct: 169 EPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAV--RRSMPVSAAT 226
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+S LIN L + A QE G ++ + L + AV L +KI
Sbjct: 227 FSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKIT 286
Query: 319 KLRKTPLV 326
TP +
Sbjct: 287 ANGCTPTI 294
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 152/305 (49%), Gaps = 3/305 (0%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQKNLLSMN 65
E+ F LID+LCK A E + K+ P I+ Y I+L GW + + L
Sbjct: 215 SEMSLFEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARKLKHAE 274
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ EMK++ P VV+YG ++ +C +R ++A+E+ EM KP+ ++ +I+ L
Sbjct: 275 RLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDAL 334
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R EAL + P TYN++V +C + I A +++ +M G P
Sbjct: 335 AEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIP 394
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ + + G+ +E +++ +M G P TY +V++M C ++++A+++
Sbjct: 395 TTYNYFFRYFSRCGKVDEGMNLYTKMIES-GHNPDRLTYHLVLKMLCEEEKLELAVQVSM 453
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
EM+ +G + + L + LC KL++A F++M+ GI P F L L+ +G
Sbjct: 454 EMRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRGIIPQYLTFQKLNVELKKQG 513
Query: 306 MEETA 310
M E A
Sbjct: 514 MNEMA 518
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 113/237 (47%), Gaps = 3/237 (1%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCK--PSPHIFCTLINGLGSEKRLSEALQFFGQ 140
+ I+I++ C EA E + T+ PS ++ ++NG ++L A + + +
Sbjct: 220 FEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARKLKHAERLWEE 279
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
K P TY +V YC R+ A M+ EM K GI PN Y+ ++ L +AGR
Sbjct: 280 MKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGR 339
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
+EA + +R PT+STY +V+ FC ++ A +I +M +RG LP+ Y+
Sbjct: 340 FKEALGMMERFHVL-QIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYN 398
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
K+D+ + +M++ G P + + + L +E E AV ++ ++
Sbjct: 399 YFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEM 455
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 102/224 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+K +N +ID L ++ + A + ++ + P + +Y L++G+ + +
Sbjct: 315 MTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGD 374
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ ++M GF P +Y + DE + L+ +M + P +
Sbjct: 375 IEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHL 434
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ L E++L A+Q + + +G++ + T + C ++ +A+ ++M + G
Sbjct: 435 VLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLTHLLCKMHKLEEAFAEFEDMIRRG 494
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
I P T+ + L K G E A + MS P ++ +TY
Sbjct: 495 IIPQYLTFQKLNVELKKQGMNEMARKLCHLMSSVPYSDKLPNTY 538
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 108/271 (39%), Gaps = 46/271 (16%)
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L + T KP+P + + + S +L +L + ++ GF+P++ +++V+ A
Sbjct: 91 LLTNLTQTGIKPTPPLLHAVFDHFASSPKLLHSLYLWALNQP-GFKPDSSLFDSVINALA 149
Query: 162 WSMRINDAYRMM-----------------------------DEMRKCGIG---------- 182
+DA+ ++ M K I
Sbjct: 150 KMKEFDDAWSLVLDRIRRDDDDDEKLVSVGTFAIIIRRYARAGMHKAAIRTFEFAKDKKS 209
Query: 183 -----PNTRTYDIVLHHLIKAGRTEEAYS-VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
++I++ L K G EA + +R G P++ Y I++ + +
Sbjct: 210 IVDSVSEMSLFEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARK 269
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+ A R+W+EMK V P + Y TL+ C +++ A + EM GI+P +++
Sbjct: 270 LKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNP 329
Query: 297 LKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
+ AL + G + A+ + ++ L+ P +
Sbjct: 330 IIDALAEAGRFKEALGMMERFHVLQIGPTLS 360
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 157/313 (50%), Gaps = 2/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ GL+ ++ +I LCK VF+ M + ++ YT L++ + N
Sbjct: 310 MDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGN 369
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ MK +G EPD V+YG+++N+ C + R DEA+E + + +
Sbjct: 370 MGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSS 429
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GLG R+ EA + F + K+G P++ YNA++ A +I++A + M G
Sbjct: 430 LIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDG 489
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TY I++ L + R EEA +++ M K G PT + + + C + +V A
Sbjct: 490 CDQTVYTYTILITGLFREHRNEEALTLWDLMIDK-GITPTAAAFRALSTGLCLSGKVARA 548
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+I DEM GV+P + +IN LC ++ +ACK ++D G PG++ + L A
Sbjct: 549 CKILDEMAPMGVIP-ETAFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINA 607
Query: 301 LRDEGMEETAVVL 313
LR G + A+ L
Sbjct: 608 LRKAGNADLALKL 620
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 145/316 (45%), Gaps = 1/316 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+ GL + N LI + VE V+ +MK+ +P + SY L+ G K +
Sbjct: 172 EMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIE 231
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
S V+ M++ PDVV+Y MI +C + +A E + ME N P + TLI
Sbjct: 232 SAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLI 291
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+E L + + ++G E Y+ V+G C + + Y + + M G
Sbjct: 292 QACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCK 351
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
N Y ++ K G EA +FKRM +K G EP TY ++V C + ++D A+
Sbjct: 352 ANVAIYTALIDSNAKCGNMGEAMLLFKRM-KKEGLEPDEVTYGVIVNSLCKSGRLDEALE 410
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ +GV YS+LI+ L ++D+A + F EM+ G P ++ L AL
Sbjct: 411 YMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALA 470
Query: 303 DEGMEETAVVLAQKID 318
G + A+ L+++++
Sbjct: 471 KCGKIDEALALSKRME 486
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 167/395 (42%), Gaps = 73/395 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L +N L++ L S+ +E A+ VF+ M+ + PD+ +Y +++G+ +
Sbjct: 205 MKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGK 264
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E + M+ PD ++Y +I A + +D + L+ EM+ + PH++
Sbjct: 265 TRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSL 324
Query: 121 LINGLGSEKR-----------------------------------LSEALQFFGQSKKRG 145
+I GL + + + EA+ F + KK G
Sbjct: 325 VIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEG 384
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMD------------------------------- 174
EP+ TY +V + C S R+++A M+
Sbjct: 385 LEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAE 444
Query: 175 ----EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
EM K G P++ Y+ ++ L K G+ +EA ++ KRM G + TV TY I++
Sbjct: 445 RIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVD-GCDQTVYTYTILITG 503
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ + A+ +WD M +G+ P + L LC K+ ACK EM +G+ P
Sbjct: 504 LFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPE 563
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKI-DKLRKTP 324
F ++ L G + A LA I D+ R+ P
Sbjct: 564 -TAFDDMINILCKAGRIKEACKLADGIVDRGREIP 597
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 125/304 (41%), Gaps = 36/304 (11%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
K++++ +++ Y L++ L S+ V+ + K+ G V S +I + +
Sbjct: 136 KQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMV 195
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+E + ++R M+ +PS + L+NGL + K + A + F + P+ TYN +
Sbjct: 196 EEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTM 255
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRT----------------------------- 187
+ YC + A+ + M + P+ T
Sbjct: 256 IKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGL 315
Query: 188 ------YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
Y +V+ L K G+ E Y+VF+ M K G + V+ Y ++ + AM
Sbjct: 316 EIPPHVYSLVIGGLCKDGKRVEGYTVFENMISK-GCKANVAIYTALIDSNAKCGNMGEAM 374
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ MK G+ P Y ++NSLC +LD+A +Y + G+ +S+L L
Sbjct: 375 LLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGL 434
Query: 302 RDEG 305
G
Sbjct: 435 GKSG 438
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 151/297 (50%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ ++ L+D LCK+ A+++FD M KR P+I +Y LL+G+ + L+ M
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 355
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G PD + I+I A+ + D+A+ +F +M P+ + +I
Sbjct: 356 HGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGI 415
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ +A+ +F Q G P YN+++ C + A ++ EM GI N
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ ++ K GR E+ +F+ M R G +P V TY ++ +C ++D AM++
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVR-IGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M + G+ P YSTLIN C +++DA F+EM G+ P ++ + Q L
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 147/304 (48%), Gaps = 4/304 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD---PDIKSYTILLEGWGQ 57
M + G + +N L+ LC + A E+ M R PD+ SYT ++ G+ +
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + Y EM D G PDVV+Y +I A C A+ D+A+E+ M P
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ ++++G S + EA+ F + + G EP+ TY+ ++ C + R +A ++ D M
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K G+ P TY +L G E + + M R G P + I++ + +V
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPDHYVFSILICAYAKQGKV 387
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D AM ++ +M+ +G+ P Y +I LC +++DA YF++M+D G+ P ++++L
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 298 KQAL 301
L
Sbjct: 448 IHGL 451
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 156/331 (47%), Gaps = 8/331 (2%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M + G + PD + LI C++ ++ + K+ F D ++T LL+G
Sbjct: 75 MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 58 QKNLL-SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
K +M+ V R M + G P+V SY I++ C R EA+EL M SP
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPP 194
Query: 117 ---IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ T+ING E +A + + RG P+ TYN+++ A C + ++ A ++
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVL 254
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ M K G+ P+ TY+ +LH +G+ +EA K+M R G EP V TY +++ C
Sbjct: 255 NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM-RSDGVEPDVVTYSLLMDYLCK 313
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
N + A +I+D M RG+ P + Y TL+ + L + M+ GI P +
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
FS L A +G + A+++ K+ + P
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNP 404
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID+ CK V ++++F+ M + P++ +Y L+ G+ + ++ M
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+ V+Y +IN +C R ++A+ LF+EME++ P + ++ GL +R +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + + + G + E TYN ++ C + +DA +M + + RT++I++
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F S G P TY ++ ++ +++ M+ G
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSN-GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 717
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
M + ++ L ++ A Y M+D
Sbjct: 718 TVDSGMLNFIVRELLQRGEITRAGTYLS-MID 748
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 135/293 (46%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LC ERA+E+ +M R + + +++ ++ ++ +++ M
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMV 503
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+V++Y +IN +C A + DEA++L M + KP+ + TLING R+
Sbjct: 504 RIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRME 563
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL F + + G P+ TYN ++ + R A + + + G TY+I+L
Sbjct: 564 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIIL 623
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K T++A +F+ + + T+ I++ + D A ++ + G+
Sbjct: 624 HGLCKNKLTDDALQMFQNLCLMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P Y + ++ + L++ + F M D G + + + + L G
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 7/285 (2%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD--DGFEPDVVSYG 84
E A+ VFD++ +R I L + +++ R + D PD+ +YG
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF-FGQSKK 143
I+I C A R D + + F L+ GL ++KR S+A+ + +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAY---RMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
G P +YN ++ C R +A MM + R G P+ +Y V++ K G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
+++AYS + M + G P V TY ++ C +D AM + + M GV+P Y+
Sbjct: 212 SDKAYSTYHEMLDR-GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++++ C + +A + ++M G+ P +S L L G
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K + +N LI+ C + ++ A ++ M P+ +Y+ L+ G+ +
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM+ G PD+++Y I++ +R A EL+ + + + +
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL K +ALQ F + EA T+N ++ A R ++A + G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ PN TY ++ ++I G EE +F M
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSM 712
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK ++ LI+ CK +E A +F +M+ PDI +Y I+L+G Q +
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+Y + + G + ++ +Y I+++ C K D+A+++F+ + + K F
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L R EA F G P TY + + + ++ M G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ + ++ L++ G A + + K
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 163/320 (50%), Gaps = 9/320 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI+ LCK A ++ ++ + P++ Y +++ + K + ++Y EM
Sbjct: 146 YGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 205
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G PDVV+Y +I+ + +A++LF +M N KP + F L++G + ++
Sbjct: 206 SEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 265
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E F K+G +P TY +++ YC ++N A + + M + G+ P+T++Y+I++
Sbjct: 266 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMI 325
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K + +EA ++FK+M K P V TY ++ C + ++ A+++ DEM RGV
Sbjct: 326 NGFCKIKKVDEAMNLFKKMHCK-NIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384
Query: 253 LPVMHMYSTLINSLCHEDKLDDAC--------KYFQEMLDIGIRPPGQLFSNLKQALRDE 304
P + YS+++++LC ++D A + F+++ G ++ + Q +
Sbjct: 385 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVK 444
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G+ A+ L K++ + P
Sbjct: 445 GLFNEALALLSKMEDNGRIP 464
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 154/326 (47%), Gaps = 14/326 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQ 58
G+ L N LI+ + + VF + K+ +DP++ + T L++G +G
Sbjct: 90 GIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTL 149
Query: 59 KNLL-------SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC 111
N L + ++ R + +P+VV Y +I++ C K +EA +L+ EM +
Sbjct: 150 INGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGI 209
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
P + LI+G +L +A+ F + +P+ T+N +V +C ++ +
Sbjct: 210 SPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 269
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ M K GI PN TY ++ + +A S+F M++ G P +Y I++ F
Sbjct: 270 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQG-GVNPDTQSYNIMINGF 328
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C +VD AM ++ +M + ++P + Y++LI+ LC K+ A K EM D G+ P
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388
Query: 292 QLFSNLKQALRDEGMEETAVVLAQKI 317
+S++ AL + A+ L K+
Sbjct: 389 ITYSSILDALCKNHQVDKAIALLTKL 414
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 9/256 (3%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ FN L+D CK ++ + VF M K+ P++ +Y L++G+ K + N
Sbjct: 244 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAN 303
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ M G PD SY IMIN C K+ DEA+ LF++M N P+ + +LI+GL
Sbjct: 304 SIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGL 363
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC------ 179
++S AL+ + RG P+ TY++++ A C + +++ A ++ +++
Sbjct: 364 CKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLF 423
Query: 180 --GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G + Y +++ G EA ++ +M G P TYEI++ +
Sbjct: 424 VKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDN-GRIPDAKTYEIIILSLFKKDEN 482
Query: 238 DMAMRIWDEMKARGVL 253
DMA ++ EM ARG+L
Sbjct: 483 DMAEKLLREMIARGLL 498
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 142/290 (48%), Gaps = 7/290 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ LI ++ A ++F+KM PD+ ++ IL++G+ + +
Sbjct: 208 GISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEG 267
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G +P+VV+Y +++ +C K+ ++A +F M P + +ING
Sbjct: 268 KTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMING 327
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K++ EA+ F + + P TY +++ C S +I+ A +++DEM G+ P+
Sbjct: 328 FCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPD 387
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRK-------PGTEPTVSTYEIVVRMFCYNAQV 237
TY +L L K + ++A ++ ++ + G V Y ++++ FC
Sbjct: 388 IITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLF 447
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ A+ + +M+ G +P Y +I SL +D+ D A K +EM+ G+
Sbjct: 448 NEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 497
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 49/297 (16%)
Query: 66 EVYREMKDDGFEPDVVSYGIMIN---------------AHCSAKRYD------------- 97
++R+M+ G ++V+ I+IN A+ K YD
Sbjct: 81 SLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGL 140
Query: 98 --------------------EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
A++L R ++ +P+ ++ T+I+ + K ++EA
Sbjct: 141 CLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDL 200
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ + G P+ TY+A++ + ++ DA + ++M I P+ T++I++ K
Sbjct: 201 YSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 260
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G+ +E +VF M K G +P V TY ++ +C QV+ A I++ M GV P
Sbjct: 261 DGKMKEGKTVFAMM-MKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQ 319
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
Y+ +IN C K+D+A F++M I P +++L L G A+ L
Sbjct: 320 SYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLV 376
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 104/219 (47%), Gaps = 8/219 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+K + + L+D C + V +A +F+ M + +PD +SY I++ G+ + K
Sbjct: 274 MMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKK 333
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++M P+VV+Y +I+ C + + A++L EM P + +
Sbjct: 334 VDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSS 393
Query: 121 LINGLGSEKRLSEALQFFGQSKK--------RGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+++ L ++ +A+ + K +G+ + Y ++ +C N+A +
Sbjct: 394 ILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALAL 453
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ +M G P+ +TY+I++ L K + A + + M
Sbjct: 454 LSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREM 492
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 107/266 (40%), Gaps = 49/266 (18%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREME-------------ATNC------KP----- 113
P + +G ++ + Y A+ L R+ME NC P
Sbjct: 58 PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117
Query: 114 ---------SPHI---------------FCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
P++ + TLINGL + ALQ + + +P
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPN 177
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
YN ++ + C +N+A+ + EM GI P+ TY ++ G+ ++A +F
Sbjct: 178 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFN 237
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+M + +P V T+ I+V FC + ++ ++ M +G+ P + Y +L++ C
Sbjct: 238 KMILE-NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 296
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFS 295
+++ A F M G+ P Q ++
Sbjct: 297 KQVNKANSIFNTMAQGGVNPDTQSYN 322
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 150/290 (51%), Gaps = 1/290 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK V +A++V + + P Y L+ G+ Q ++L ++ +MK
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PD ++Y +IN C + EA +L EME + PS F TLI+ G +L +
Sbjct: 401 IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF 460
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ +G + ++ +VV A+C + +I +A ++D+M + PN + Y+ ++
Sbjct: 461 TVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAY 520
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
I++G TE+A+ + ++M + G ++ TY ++++ C N+Q+D A + + +G+ P
Sbjct: 521 IESGGTEQAFLLVEKM-KSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPD 579
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ Y+T+I++ C++ D A + QEM IRP + + L AL G
Sbjct: 580 VVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAG 629
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 162/355 (45%), Gaps = 36/355 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N L+ LC++ ++ + + D+M PD +Y+IL +G + + +M
Sbjct: 260 GRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTM 319
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ E G + I++N C + +A ++ + T P+ I+ TLING
Sbjct: 320 LSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLING 379
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ L A F Q K R P+ TYNA++ C I +A ++ EM K G+ P+
Sbjct: 380 YCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPS 439
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ +AG+ E+ ++V M K G + V ++ VV+ FC N ++ A+ I
Sbjct: 440 VETFNTLIDAYGRAGQLEKCFTVLSDMQDK-GIKSNVISFGSVVKAFCKNGKIPEAVAIL 498
Query: 245 DEMKARGVLPVMHMYSTLINS-----------------------------------LCHE 269
D+M + V+P +Y+++I++ LC
Sbjct: 499 DDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKN 558
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++D+A + + + G+RP ++ + A ++G + A+ L Q++ K P
Sbjct: 559 SQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRP 613
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 137/292 (46%), Gaps = 1/292 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +N LI+ C+ R ++ A +F++MK R PD +Y L+ G + + +
Sbjct: 365 GLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEA 424
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM+ G +P V ++ +I+A+ A + ++ + +M+ K + F +++
Sbjct: 425 EDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKA 484
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ EA+ + P A YN+++ AY S A+ ++++M+ G+ +
Sbjct: 485 FCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSAS 544
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+++L L K + +EA + ++ + G P V +Y ++ C D A+ +
Sbjct: 545 IFTYNLLLKGLCKNSQIDEAEELIYNLTNQ-GLRPDVVSYNTIISACCNKGDTDRALELL 603
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
EM + P + Y L+++L ++ D +Q M+ + P ++
Sbjct: 604 QEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 150/340 (44%), Gaps = 36/340 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I L +S A +VFD+M R P+ +Y +++G + +L + + +M
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG +P+VV+Y ++++ C A R DE L EM + + P + L +GL
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317
Query: 133 EALQFFGQSKKR-----------------------------------GFEPEAPTYNAVV 157
L FG+S K+ G P YN ++
Sbjct: 318 TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLI 377
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + A+ + ++M+ I P+ TY+ +++ L K EA + M K G
Sbjct: 378 NGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEM-EKSGV 436
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P+V T+ ++ + Q++ + +M+ +G+ + + +++ + C K+ +A
Sbjct: 437 DPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVA 496
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+M+ + P Q+++++ A + G E A +L +K+
Sbjct: 497 ILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKM 536
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 3/257 (1%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P + S +LLE + + + G PD ++ + A +A DEA+ +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 103 FREMEATNCKPSPHIFC--TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
R M + P P F +I GL + S+AL+ F + RG P TYN ++ +
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
+ +R+ D+M + G PN TY+++L L +AGR +E ++ M+ P
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSY-SMLPD 299
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
TY I+ + ++ E +GV+ + S L+N LC + K+ A + +
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359
Query: 281 EMLDIGIRPPGQLFSNL 297
++ G+ P +++ L
Sbjct: 360 MLVHTGLVPTTAIYNTL 376
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 4/290 (1%)
Query: 43 PDIKSYTILLEG-WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
PD SY +++ G W K ++ +V+ EM D G P+ ++Y MI+ H +
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDAL-KVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFR 251
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L +M KP+ + L++GL R+ E + P+ TY+ +
Sbjct: 252 LRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLT 311
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ + E K G+ T I+L+ L K G+ +A V + M G PT
Sbjct: 312 RTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE-MLVHTGLVPTT 370
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
+ Y ++ +C + A I+++MK+R + P Y+ LIN LC + + +A E
Sbjct: 371 AIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVME 430
Query: 282 MLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTPLVDRGQ 330
M G+ P + F+ L A G +E+ VL+ DK K+ ++ G
Sbjct: 431 MEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 36/224 (16%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + F ++ CK+ + A + D M + P+ + Y +++ + +
Sbjct: 466 MQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGG 525
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +MK G + +Y +++ C + DEA EL + TN
Sbjct: 526 TEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNL--TN---------- 573
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+G P+ +YN ++ A C + A ++ EM K
Sbjct: 574 -----------------------QGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD 610
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
I P RTY +L L AGR + +++ M K EP+ S Y
Sbjct: 611 IRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHK-NVEPSSSIY 653
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS-TYEIVVRMFCYNAQVD 238
G P+T ++ + + AG +EA ++ +RM R G P + +Y +V+ + +
Sbjct: 153 GARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 212
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A++++DEM RGV P Y+T+I+ L+ + +ML G +P ++ L
Sbjct: 213 DALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLL 272
Query: 299 QALRDEG-MEETAVVL 313
L G M+ET ++
Sbjct: 273 SGLCRAGRMDETRALM 288
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + +N L+ LCK+ ++ A+E+ + + PD+ SY ++ + +
Sbjct: 536 MKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGD 595
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ +EM P + +Y +++A SA R + L++ M N +PS I+ T
Sbjct: 596 TDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 141/263 (53%), Gaps = 5/263 (1%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M ++ F+PD+ +Y+ ++ G + + E+ EM + G PDV +Y I+++ C A +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
DEA ELF +M C + + LINGL ++ + A + + +G+EP+ TYN
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM---S 212
++ C ++++A + D M G P+ Y+ +L L K G+ EA+ +FK M
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
RK P + TY ++ FC + D AM+++ ++ A+G +P Y++++ L + +
Sbjct: 181 RK--VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238
Query: 273 DDACKYFQEMLDIGIRPPGQLFS 295
D+A + F++M+D G P G +S
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYS 261
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 143/279 (51%), Gaps = 3/279 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ LCK ++ERA ++ ++M + ++PD +Y +L G + + + + M
Sbjct: 83 YNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMP 142
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKR 130
G+ PDVV+Y +++A + EA LF+ M+ + K +P + + TLI+G ++
Sbjct: 143 SRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEK 202
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
EA++ F +G+ P+ TYN+++ +++A M +M G PN TY I
Sbjct: 203 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSI 262
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
VL + G +++ M+ K + P V V+ M C +VD A ++ +EM
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFS-PDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKI 321
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
G +P + Y+ L++ LC + +D A + F M+D G P
Sbjct: 322 GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 3/299 (1%)
Query: 21 CKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDV 80
C+ ++ R E++++M ++RF PD+ +++ + K + ++V EM G PDV
Sbjct: 268 CRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDV 327
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
V+Y I+++ C D+A ELF M C P + ++NGL ++ +A F +
Sbjct: 328 VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 387
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
+R P+ T+N ++ C + ++++A ++D M + + P+ T ++H L + R
Sbjct: 388 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKR 447
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-KARGVL-PVMHM 258
T+EA +F+ M K GT V + IV+ C ++ A+ + M K+ G P +
Sbjct: 448 TDEAVRLFQYMVEK-GTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVT 506
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
Y+TL+N+L ++D A YFQ+M G P ++ L LR +G A L Q +
Sbjct: 507 YTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 565
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 160/318 (50%), Gaps = 4/318 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM--KKRRFDPDIKSYTILLEGWGQQKNLL 62
G ++ +N L+D L K V A +F M R+ PD+ +Y L++G+ + +
Sbjct: 145 GYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTD 204
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++++++ G+ PD V+Y ++ DEA E+F++M + C P+ + ++
Sbjct: 205 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G ++ L+ + + ++ F P+ NAV+ C + +++DA+++++EM K G
Sbjct: 265 SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAV 324
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ TY+I+L L K ++A+ +F M G P + +Y +V+ C +V A
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDN-GCAPDIVSYSVVLNGLCKTNKVHDARV 383
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL- 301
++D M R ++P + ++ L++ LC KLD+A M + + P G + L L
Sbjct: 384 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLC 443
Query: 302 RDEGMEETAVVLAQKIDK 319
RD+ +E + ++K
Sbjct: 444 RDKRTDEAVRLFQYMVEK 461
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 138/278 (49%), Gaps = 1/278 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L +N LID C+ + A ++F + + + PD +Y +L G ++ N+ E++
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 245
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
++M D G P+ +Y I+++ HC +EL+ EM P + +I+ L
Sbjct: 246 KKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKA 305
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
K++ +A + + K G P+ TYN ++ C + ++ A+ + M G P+ +Y
Sbjct: 306 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 365
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+VL+ L K + +A +F RM + P V T+ I++ C ++D A + D M
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIERK-LVPDVVTFNILMDGLCKAGKLDEAKDLLDVMS 424
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
VLP +TL++ LC + + D+A + FQ M++ G
Sbjct: 425 EHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 168/367 (45%), Gaps = 57/367 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ ++ +I LCK+ V A E+ ++M ++ +PD+ +YTI+++ +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E++ +M + G + V+Y +IN C + + A +L EM + +P + T
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPE------------------------------- 149
+++GL ++SEA QFF RG+ P+
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 150 ---AP---TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
AP TYN ++ +C + ++A ++ ++ G P+T TY+ +L L + +E
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A +FK+M G P +TY IV+ C + + +++EM + P + + + +I
Sbjct: 241 AEEMFKKMV-DSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVI 299
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
+ LC K+DDA K +EM IG P ++ L +D L KT
Sbjct: 300 DMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNIL-------------------LDGLCKT 340
Query: 324 PLVDRGQ 330
LVD+
Sbjct: 341 NLVDKAH 347
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +ID LCK++ V+ A +V ++M K PD+ +Y ILL+G + + +E++ M D
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 355
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+G PD+VSY +++N C + +A LF M P F L++GL +L E
Sbjct: 356 NGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDE 415
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + P+ T ++ C R ++A R+ M + G + ++IVL
Sbjct: 416 AKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLA 475
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGT-EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + G+ +A FK M + G P V TY +V +VD A+ + +M G
Sbjct: 476 GLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGC 535
Query: 253 LPVMHMYSTLINSL 266
P Y+TL+N L
Sbjct: 536 APDYVAYNTLMNGL 549
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 3/255 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G ++ +N L+D LCK+ V++A E+F M PDI SY+++L G +
Sbjct: 318 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 377
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M + PDVV++ I+++ C A + DEA +L M N P T
Sbjct: 378 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTT 437
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL +KR EA++ F ++G + +N V+ C ++ A M K
Sbjct: 438 LMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSD 497
Query: 181 --IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
P+ TY +++ LI+AGR ++A F++M+ G P Y ++ +
Sbjct: 498 GEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT-GSGCAPDYVAYNTLMNGLRKQGRHI 556
Query: 239 MAMRIWDEMKARGVL 253
A R+ MK +G L
Sbjct: 557 QADRLTQAMKEKGFL 571
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 162/325 (49%), Gaps = 11/325 (3%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ Q+LP FN L+D L KSRH +A + +++ RF PD+ +Y L +GW + K+
Sbjct: 161 VAQDLPLFNSLLDALSKSRHAGKAASLVRALEQ-RFTPDVVTYNTLADGWCRVKDTSRAL 219
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-----TNCKPSPHIFCT 120
+V R M + G P +Y I++ A + A + F +M+ +CKP + T
Sbjct: 220 DVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTT 279
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GLG +L +A + F + K G P TYNA++ C + DA + D M G
Sbjct: 280 MVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKG 339
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY +++ L AG+ + + +RM + G EP V TY +++R +++
Sbjct: 340 YVPNVVTYTVLIRGLCHAGKIDRGLKLLERM-KNGGCEPIVQTYNVLIRYLFEEGEMEKG 398
Query: 241 MRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFSN 296
+ ++++M K LP Y+ +I+++ + +D A + EM+D G P +F+
Sbjct: 399 LDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMVDRGYLPRRFMFNR 458
Query: 297 LKQALRDEGMEETAVVLAQKIDKLR 321
+ L G +E + L + +K R
Sbjct: 459 VLNGLMLTGNQELSRKLLRMQEKYR 483
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 12/243 (4%)
Query: 92 SAKRYDEAVELFREMEATN-CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
S +R D AV LF + ++ +F +L++ L + +A ++R F P+
Sbjct: 141 SQRRPDLAVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQR-FTPDV 199
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMR---KCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
TYN + +C R+ D R +D +R + GI P TY+I+L +AG+ A+
Sbjct: 200 VTYNTLADGWC---RVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDF 256
Query: 208 F----KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
F KR S+ +P V +Y +V Q++ A +++DEM G P + Y+ LI
Sbjct: 257 FLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALI 316
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
+C + ++DA F ML G P ++ L + L G + + L +++
Sbjct: 317 QVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCE 376
Query: 324 PLV 326
P+V
Sbjct: 377 PIV 379
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 13/217 (5%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K ++ + ++ L + +E+A++VFD+M K P + +Y L++ ++ N+
Sbjct: 271 KPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVT 330
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ M G+ P+VV+Y ++I C A + D ++L M+ C+P + LI L
Sbjct: 331 VFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLF 390
Query: 127 SEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRIND---AYRMMDEMRKCGIG 182
E + + L F + SK P TYN ++ A R D A RM+DEM G
Sbjct: 391 EEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMVDRGYL 450
Query: 183 PNTRTYDIVLHHLIKAG---------RTEEAYSVFKR 210
P ++ VL+ L+ G R +E Y +F+R
Sbjct: 451 PRRFMFNRVLNGLMLTGNQELSRKLLRMQEKYRLFER 487
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 170/326 (52%), Gaps = 5/326 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
D+ LK P+ +N L+D LCKS ++RA+++FD M ++ +PD +Y+ +++G+ +
Sbjct: 583 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 642
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+N+ ++ EM G +P Y +++ C ++A+ LFREM + F
Sbjct: 643 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-F 701
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
TLI+G ++ EA Q F + + P+ TY V+ +C + ++ +A + EM++
Sbjct: 702 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 761
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ +T TY +++ K G++ E +++F++M K G +P TY +V+ C +
Sbjct: 762 RNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK-GVKPDEVTYGLVIYAHCKEDNLV 820
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++ DE+ +G+L ++ LI +LC + L +A K EM ++G++P S L
Sbjct: 821 EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 880
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP 324
++ + G + A + + + L P
Sbjct: 881 RSFHEAGKMDEATRVFEGVKSLGLVP 906
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K F LI+ C+ ++ RA E+ D+M+KR P SY ++ G K+
Sbjct: 305 MITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKD 364
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N++ +M G +P+VV Y +I + S R +EA L M + P +
Sbjct: 365 LSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNA 424
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ EA + + + RG +P+A T+ A + Y + ++ +A + DEM G
Sbjct: 425 IISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++++ KAG EA S+F+ + G P V T + N +V A
Sbjct: 485 LMPNNPLYTVLINGHFKAGNLMEALSIFRHL-HALGVLPDVQTCSAFIHGLLKNGRVQEA 543
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++ E+K +G++P + YS+LI+ C + +++ A + EM GI P +++ L
Sbjct: 544 LKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDG 603
Query: 301 LRDEG 305
L G
Sbjct: 604 LCKSG 608
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 140/282 (49%), Gaps = 1/282 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N +I L K+ +E A +++ R PD ++ + G+ + +
Sbjct: 414 GVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEA 473
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + EM D G P+ Y ++IN H A EA+ +FR + A P I+G
Sbjct: 474 AKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG 533
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ EAL+ F + K++G P+ TY++++ +C + A+ + DEM GI PN
Sbjct: 534 LLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPN 593
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ ++ L K+G + A +F M K G EP TY ++ +C + V A ++
Sbjct: 594 IFIYNALVDGLCKSGDIQRARKLFDGMPEK-GLEPDSVTYSTMIDGYCKSENVAEAFSLF 652
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
EM ++GV P +Y+ L++ C E ++ A F+EML G
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 142/297 (47%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LC+++ + A+ F++M+K PD + + L++G+ ++ +
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + M G ++++Y ++I+ C + ++A E+ + M CKP+ FC
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G E + AL+ + +KR P A +Y A++ C ++ A +++++M G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++ GR EEA + MS G P + Y ++ +++ A
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCS-GVAPDIFCYNAIISCLSKAGKMEEA 438
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
E++ RG+ P + I K+ +A KYF EMLD G+ P L++ L
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVL 495
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 143/309 (46%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ L +N LI LCK +E+A E+ M P+ +++ +L+EG+ ++ N+
Sbjct: 274 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRA 333
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ EM+ P VSYG MIN C K A +L +M + KP+ ++ TLI G
Sbjct: 334 LELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMG 393
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
SE R+ EA + G P+ YNA++ + ++ +A + E++ G+ P+
Sbjct: 394 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPD 453
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ + K G+ EA F M G P Y +++ + A+ I+
Sbjct: 454 AVTFGAFILGYSKTGKMTEAAKYFDEM-LDHGLMPNNPLYTVLINGHFKAGNLMEALSIF 512
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ A GVLP + S I+ L ++ +A K F E+ + G+ P +S+L +
Sbjct: 513 RHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQ 572
Query: 305 GMEETAVVL 313
G E A L
Sbjct: 573 GEVEKAFEL 581
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 144/291 (49%), Gaps = 11/291 (3%)
Query: 2 DKFGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ F L E+P +N L+ CK +E+A +F +M ++ F + S+ L+
Sbjct: 647 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLI 705
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+G+ + + +++++EM PD V+Y +I+ HC A + +EA LF+EM+ N
Sbjct: 706 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 765
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ +L+ G + SE F + +G +P+ TY V+ A+C + +A+++
Sbjct: 766 VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 825
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
DE+ G+ +D+++ L K EA + M + G +P+++ +VR F
Sbjct: 826 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMG-ELGLKPSLAACSTLVRSFH 884
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++D A R+++ +K+ G++P L+N ++ +DA ++++
Sbjct: 885 EAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 36/242 (14%)
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
R M + G P+ +Y I+ C AKR +EA F EM+ T KP + LI+G E
Sbjct: 198 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 257
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ E L R+ D M CGI N TY
Sbjct: 258 GDIDEVL-----------------------------------RIKDVMVSCGIPINLITY 282
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
++++H L K G+ E+A + K M G +P T+ +++ +C + A+ + DEM+
Sbjct: 283 NVLIHGLCKFGKMEKAAEILKGMI-TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME 341
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
R ++P Y +IN LCH L A K ++M G++P ++S L EG E
Sbjct: 342 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 401
Query: 309 TA 310
A
Sbjct: 402 EA 403
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 22/235 (9%)
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+ S+ D + FR + SP +F LI+ L EA F +K
Sbjct: 135 YSSSSILDSVLFWFRNYGGS----SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSI--- 187
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+ C S+R M + G+ PNT TY I+ L +A R EA F+
Sbjct: 188 -----LISLIRCNSLR---------SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFE 233
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M +K G +P + ++ F +D +RI D M + G+ + Y+ LI+ LC
Sbjct: 234 EM-QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKF 292
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
K++ A + + M+ +G +P + F L + E A+ L +++K P
Sbjct: 293 GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVP 347
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 1/298 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GL+ FN LI+ CKS ++E + M++ R PD+ +Y+ L++G ++ L
Sbjct: 260 KTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLE 319
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
N +++EM D G P+ V++ +IN C R D A+E++++M K ++ TLI
Sbjct: 320 DANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLI 379
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL EA +F G+ KRG P+ TY ++ C + A M EM K GI
Sbjct: 380 DGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQ 439
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+ + ++ L + G+ +A + M R G +P TY +V+ FC V M +
Sbjct: 440 LDNVAFTAIISGLCRDGKIVDAERTLREMLR-AGLKPDDGTYTMVMDGFCKKGDVKMGFK 498
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ EM++ G +P + Y+ L+N LC + ++ +A ML++G+ P ++ L Q
Sbjct: 499 LLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQG 556
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 130/274 (47%), Gaps = 1/274 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++F + ++ ++ LID LCK +E A +F +M R P+ ++T L+ G +
Sbjct: 293 MEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGR 352
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+Y++M G + D+V Y +I+ C + EA + EM P + T
Sbjct: 353 VDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTT 412
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G E L AL+ + K G + + + A++ C +I DA R + EM + G
Sbjct: 413 LLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAG 472
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +V+ K G + + + K M + G P V TY +++ C QV A
Sbjct: 473 LKPDDGTYTMVMDGFCKKGDVKMGFKLLKEM-QSDGHIPGVITYNVLMNGLCKQGQVKNA 531
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
+ + M GV+P Y+ L+ C KL D
Sbjct: 532 DMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGD 565
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L+ + +V A + F KK LLE + + + E Y E+
Sbjct: 165 FDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEIL 224
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G+ P+V ++ +++N C + +A +F E+ T +P+ F TLING L
Sbjct: 225 DSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLE 284
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + ++ P+ TY+A++ C ++ DA + EM G+ PN T+ ++
Sbjct: 285 EGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLI 344
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K GR + A ++++M K G + + Y ++ C A + EM RG+
Sbjct: 345 NGQCKNGRVDLALEIYQQMFTK-GLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGL 403
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P Y+TL++ C E L+ A + +EM+ GI+ F+ + L +G
Sbjct: 404 IPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDG 456
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 128/274 (46%), Gaps = 1/274 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ + K A E + ++ + P++ ++ +L+ ++ + ++ E++ G
Sbjct: 203 LLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG 262
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+P VS+ +IN +C + +E L ME P + LI+GL E +L +A
Sbjct: 263 LQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDAN 322
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + RG P T+ ++ C + R++ A + +M G+ + Y+ ++ L
Sbjct: 323 HLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGL 382
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G EA M+++ G P TY ++ C +++A+ + EM G+
Sbjct: 383 CKGGYFREARKFVGEMTKR-GLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLD 441
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ +I+ LC + K+ DA + +EML G++P
Sbjct: 442 NVAFTAIISGLCRDGKIVDAERTLREMLRAGLKP 475
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +L +N LID LCK + A++ +M KR PD +YT LL+G ++ +L
Sbjct: 367 GLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELA 426
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ +EM +G + D V++ +I+ C + +A REM KP + +++G
Sbjct: 427 LEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDG 486
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + + + + G P TYN ++ C ++ +A +++ M G+ P+
Sbjct: 487 FCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPD 546
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRM 211
TY+I+L K G+ + +V M
Sbjct: 547 DITYNILLQGHCKHGKLGDFQNVKTEM 573
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 79/209 (37%), Gaps = 36/209 (17%)
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
+G + ++A++ Y ++DA + +K + +L +IK
Sbjct: 156 KGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMV 215
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A + + G P V T+ +++ C +V A I+DE++ G+ P ++TLI
Sbjct: 216 ALEFYLEI-LDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLI 274
Query: 264 N-----------------------------------SLCHEDKLDDACKYFQEMLDIGIR 288
N LC E +L+DA F+EM D G+
Sbjct: 275 NGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLV 334
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKI 317
P F+ L G + A+ + Q++
Sbjct: 335 PNDVTFTTLINGQCKNGRVDLALEIYQQM 363
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 91/241 (37%), Gaps = 33/241 (13%)
Query: 110 NCKPS--PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
N PS H F +L+N L FF F PT++ V +YC +
Sbjct: 67 NILPSFKAHHFISLVNQNPYFLPPKSLLSFFD------FLSSYPTFSHTVQSYCSMVHFL 120
Query: 168 DAYRMMDE------------------------MRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
A+RM + + G ++ +D ++ + G +
Sbjct: 121 IAHRMNQQAESLLHFVVSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSD 180
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A F R+++K + + + ++ + +A+ + E+ G P ++ ++ L+
Sbjct: 181 AIQCF-RLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLM 239
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
N LC E K+ DA F E+ G++P F+ L G E L +++ R
Sbjct: 240 NRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVF 299
Query: 324 P 324
P
Sbjct: 300 P 300
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 157/304 (51%), Gaps = 5/304 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + +ID LCK VE E F +M+ R ++PD +Y L++G+ + K + +
Sbjct: 219 IPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHR 278
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
VYR+M G V+Y I+++ C A R EA F ME C + + L++G
Sbjct: 279 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 338
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
SE +S A++ F + RG EP +YN ++ C + ++ AY +++ + + P+
Sbjct: 339 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 398
Query: 187 TYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T++ LH L + T + +F+ M + GT P + +Y I++ C +++A+ I+
Sbjct: 399 TFNAFLHGLCQRLDTVSDGVELFESMVSQ-GTSPNLHSYSILMDGICRAGGLEVALEIFR 457
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
EM +RGV P + +++TLI LC ++D+A + F+E+ +S L R E
Sbjct: 458 EMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSLLDGLSRCER 517
Query: 306 MEET 309
MEE
Sbjct: 518 MEEA 521
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 168/320 (52%), Gaps = 7/320 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFD-KMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+PD + LID LCK+ + A++VFD + +R F PD +YT +++G + +
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E + EM++ G+EPD V+Y +I+ AK +A ++R+M + S + +++GL
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R++EA F ++RG TY+A++ +C ++ A + M G PN
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNL 362
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA-QVDMAMRIW 244
+Y+I++ L +AG+ +AY F+++ ++ P V T+ + C V + ++
Sbjct: 363 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC-PDVYTFNAFLHGLCQRLDTVSDGVELF 421
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ M ++G P +H YS L++ +C L+ A + F+EM+ G+ P +F+ L + L
Sbjct: 422 ESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIA 481
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G + A+ + +++++ R P
Sbjct: 482 GRVDEALEVFRELER-RSAP 500
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 160/332 (48%), Gaps = 9/332 (2%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+ K K+ LP + L+D L K+ ++ A V ++M ++ P +K+YT++++G +
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA----TNCKP 113
+ ++ +M +G PD Y +I C + + +EA L++E A P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFG-QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ +LI+GL R+ EA Q F ++ +RGF P+A TY +++ C R+ +
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
EMR G P+ TY ++ +KA +A+ V+++M + GT + TY I++ C
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM-LQSGTVVSTVTYNIILDGLC 303
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+V A + M+ RG + + YS L++ C E + A + F+ MLD G P
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363
Query: 293 LFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++ + + L G A +K+ + R P
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP 395
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 133/259 (51%), Gaps = 4/259 (1%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
PD+ ++T+++ G ++K L V G EPD V+Y + I+ C A+R D+A +L
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
++M+ C P+ + L++GL RL EA+ Q ++G P TY V+
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK---PGTEP 219
+ R+ +A R+ +M G P+ Y ++ L K+G+ EEAY+++K + + P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIW-DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
V TY ++ C ++ A +++ DE RG +P Y+++I+ LC ++++ C+
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244
Query: 279 FQEMLDIGIRPPGQLFSNL 297
F EM + G P ++ L
Sbjct: 245 FHEMRNRGYEPDAVTYAAL 263
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 94/171 (54%), Gaps = 1/171 (0%)
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
C P F +INGL EKRL EA ++ + G EP+ TYN + C + R++DA+
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+++ +M + P T TY ++ L+KAGR +EA +V ++M K G PT+ TY +V+
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEK-GNSPTLKTYTVVIDG 121
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
+V+ A RI+ +M G P +Y+ LI LC K ++A ++E
Sbjct: 122 LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKE 172
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + ++ L+D C +V A E+F +M R +P++ SY I++ G +
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD---EAVELFREMEATNCKPSPHI 117
L + ++ PDV ++ ++ C +R D + VELF M + P+ H
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHGLC--QRLDTVSDGVELFESMVSQGTSPNLHS 435
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L++G+ L AL+ F + RG P+ +N ++ C + R+++A + E+
Sbjct: 436 YSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 495
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEA 204
+ P+ +Y +L L + R EEA
Sbjct: 496 RRS-APDAWSYWSLLDGLSRCERMEEA 521
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ + +V++ L + R +EA+SV +R R G EP TY + + C +VD A +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVR-AGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ +M + LP Y+ L++ L +LD+A ++M++ G P + ++ + L
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 303 DEGMEETA 310
G E A
Sbjct: 124 KAGRVEEA 131
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L ++ L+D +C++ +E A E+F +M R PD+ + L+ +
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
EV+RE++ PD SY +++ +R +EA L M+ C P
Sbjct: 488 LEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P + + +V+ C ++D A + + G P Y+ I+ LC +++DDA +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDK 319
++M + P ++ L L G ++E VL Q ++K
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEK 106
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 156/319 (48%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK G++ ++ +N +I LCKSR +E A++ +M +R P++ +Y L+ G+ +
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++EM G P+ V +I+ +C EA +FR M + P +
Sbjct: 567 MQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSA 626
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL +L A++ + ++G P+ TYN+++ +C I A+++ + M + G
Sbjct: 627 LIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG 686
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ +++ L KAG E A +F + K G TY ++ +C + + A
Sbjct: 687 ISPNIITYNALINGLCKAGEIERARELFDGIPGK-GLAHNAVTYATIIDGYCKSGNLSKA 745
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++DEM +GV P +YS LI+ E + A F E + G L + +
Sbjct: 746 FRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGF 805
Query: 301 LRDEGMEETAVVLAQKIDK 319
+ + E +L +DK
Sbjct: 806 CKSGKVIEANQLLEDMVDK 824
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 137/285 (48%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K L +N L+ +CK +E+A + ++M PD ++Y ++EG+ +++N +
Sbjct: 371 GVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRV 430
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMK P + G++IN C ++A +F M + KP+ I+ TLI G
Sbjct: 431 KDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKG 490
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E R EA++ K+G +P+ YN+V+ C S ++ +A + EM + G+ PN
Sbjct: 491 HVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPN 550
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++H K+G + A FK M G P ++ +C A I+
Sbjct: 551 VYTYGALIHGYCKSGEMQVADRYFKEM-LGCGIAPNDVVCTALIDGYCKEGSTTEATSIF 609
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M R V P + YS LI+ L KL A + E L+ G+ P
Sbjct: 610 RCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVP 654
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 139/305 (45%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK GL ++ ++ LID K + A+ + ++M + P +YT L++G+ +Q +
Sbjct: 297 MDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGD 356
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V EM G + ++ +Y ++ C ++A L EM KP +
Sbjct: 357 SGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNN 416
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G E+ S + KK P A T ++ C I DA R+ + M G
Sbjct: 417 MIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG 476
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++ ++ GR +EA + K M +K G +P V Y V+ C + +++ A
Sbjct: 477 VKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKK-GVQPDVLCYNSVIIGLCKSRKMEEA 535
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
EM RG+ P ++ Y LI+ C ++ A +YF+EML GI P + + L
Sbjct: 536 KDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDG 595
Query: 301 LRDEG 305
EG
Sbjct: 596 YCKEG 600
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 141/313 (45%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + LI + + A + M K+ PD+ Y ++ G + +
Sbjct: 472 MVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRK 531
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM + G +P+V +YG +I+ +C + A F+EM P+ +
Sbjct: 532 MEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTA 591
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G E +EA F R P+ TY+A++ + ++ A ++ E + G
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ K G +A+ + + M +K G P + TY ++ C +++ A
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQK-GISPNIITYNALINGLCKAGEIERA 710
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++D + +G+ Y+T+I+ C L A + F EM G+ P ++S L
Sbjct: 711 RELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDG 770
Query: 301 LRDEGMEETAVVL 313
R EG E A+ L
Sbjct: 771 CRKEGNTEKALSL 783
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 143/311 (45%), Gaps = 1/311 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ L K+ +E ++ M + D+ +YT L+ + N + EM++
Sbjct: 205 NGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEE 264
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G P +V+Y ++I C A DEA EL + M+ + LI+G G +KR +E
Sbjct: 265 KGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTE 324
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + +G +P Y A++ + +A+R+ +EM G+ N TY+ ++
Sbjct: 325 AKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVK 384
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
+ K G E+A ++ M G +P TY ++ + + EMK ++
Sbjct: 385 GVCKFGDMEKADALLNEMIM-VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLV 443
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + +IN LC ++DA + F+ M+ +G++P +++ L + EG + AV +
Sbjct: 444 PTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRI 503
Query: 314 AQKIDKLRKTP 324
+ +DK P
Sbjct: 504 LKVMDKKGVQP 514
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 130/323 (40%), Gaps = 33/323 (10%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LID CK A +F M R PD+++Y+ L+ G + L E+ E + G
Sbjct: 592 LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PDV +Y +I+ C +A +L M P+ + LINGL + A
Sbjct: 652 LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAR 711
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F +G A TY ++ YC S ++ A+R+ DEM G+ P++ Y ++
Sbjct: 712 ELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGC 771
Query: 196 IKAGRTEEAYSVFKRMSRK---------------------------------PGTEPTVS 222
K G TE+A S+F +K +P
Sbjct: 772 RKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHV 831
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY I++ C + A + + +M+ R ++P Y+ L++ + + F EM
Sbjct: 832 TYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEM 891
Query: 283 LDIGIRPPGQLFSNLKQALRDEG 305
+ I P G +S + A EG
Sbjct: 892 IAKDIEPDGVTWSVMIDAHLKEG 914
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 144/308 (46%), Gaps = 2/308 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI+ ++ + + + + +M+++ P + +Y +++ G + + E+ + M
Sbjct: 239 YTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMD 298
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G DV +Y I+I+ KR EA + EM + KP + LI+G +
Sbjct: 299 KKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSG 358
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + RG + TYNA+V C + A +++EM GI P+T+TY+ ++
Sbjct: 359 EAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMI 418
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+K T + M +K PT T +++ C + ++ A R+++ M + GV
Sbjct: 419 EGYLKEQNTSRVKDLLSEM-KKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGV 477
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAV 311
P +Y+TLI E + +A + + M G++P ++++ L + MEE
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKD 537
Query: 312 VLAQKIDK 319
L + I++
Sbjct: 538 YLVEMIER 545
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 143/320 (44%), Gaps = 2/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N LI+ LCK+ +ERA+E+FD + + + +Y +++G+ + NL
Sbjct: 686 GISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKA 745
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G PD Y +I+ ++A+ LF E S L++G
Sbjct: 746 FRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLE-SVQKGFASTSSLNALMDG 804
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ EA Q + +P+ TY ++ +C + + +A + +M+K + PN
Sbjct: 805 FCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPN 864
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L AGR E +++F M K EP T+ +++ +++
Sbjct: 865 ALTYTALLSGYNMAGRRSEMFALFDEMIAKD-IEPDGVTWSVMIDAHLKEGDHVKTLKLV 923
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M +G ++ LI+ LC ++ + + K +++ + G+ S L +
Sbjct: 924 DDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKA 983
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G + A + + + + + P
Sbjct: 984 GKMDGAARVLKSMVRFKWVP 1003
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 147/355 (41%), Gaps = 36/355 (10%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-------KKRRFDPDIKS-------- 47
+ G Q+L F+ L LC SR RA V ++M D IKS
Sbjct: 94 QMGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKEFDLNN 153
Query: 48 ---------------YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCS 92
+ +L++G+ ++ + K +GF ++ +++
Sbjct: 154 VNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLK 213
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
A + + + M N + + LIN E + + +++G P T
Sbjct: 214 ANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVT 273
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
YN V+G C + +++A+ + M K G+ + TY I++ K R EA + + M
Sbjct: 274 YNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMF 333
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
K G +P Y ++ F A R+ +EM ARGV + Y+ L+ +C +
Sbjct: 334 SK-GLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDM 392
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAVVLAQKIDKLRKTPLV 326
+ A EM+ +GI+P Q ++N+ + L+++ +L++ ++K+ LV
Sbjct: 393 EKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSE----MKKSNLV 443
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 129/284 (45%), Gaps = 5/284 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
D+ LK PD ++ LID K + E+A +F + ++ F S L++G+ +
Sbjct: 750 DEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKS 808
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ N++ +M D +PD V+Y I+I+ HC EA + F +M+ N P+ +
Sbjct: 809 GKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTY 868
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L++G R SE F + + EP+ T++ ++ A+ +++D+M K
Sbjct: 869 TALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLK 928
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G + +++ L + E V +++ + G +++T +VR F ++D
Sbjct: 929 KGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQ-GLNLSLATCSTLVRCFHKAGKMD 987
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
A R+ M +P + LIN ++A + ++M
Sbjct: 988 GAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD + LID CK+ ++ A++ F M+KR P+ +YT LL G+ M +
Sbjct: 828 PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFAL 887
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ EM EPD V++ +MI+AH + + ++L +M S ++ LI+ L
Sbjct: 888 FDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCR 947
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
++ +SE L+ + +++G T + +V + + +++ A R++ M + P++
Sbjct: 948 KEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTE 1007
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMS 212
+ +++ + +E A K+M+
Sbjct: 1008 LNDLINVEQDSTDSENAGDFLKQMA 1032
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + FN LI LC++ ER EV +M + PDI+ Y +++G ++ +
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGH 312
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +E+ M G +P+VV Y ++ CSA+R++E EL EM +C F
Sbjct: 313 LKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ + ++ Q G P+ TY V+ +C I++A ++ M CG
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT +Y IVL L A R +A + +M ++ G T+ ++ C V+ A
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ-GCPLNPITFNTLINFLCKKGLVEQA 491
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +M G P + YST+I+ L K D+A + M++ G+ P ++S++ A
Sbjct: 492 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 551
Query: 301 LRDEG 305
L EG
Sbjct: 552 LSREG 556
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 144/311 (46%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + +ID +CK H++ A E+ ++M P++ Y LL+G +
Sbjct: 288 MAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 347
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM D D V++ I+++ C D +EL +M C P + T
Sbjct: 348 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTT 407
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ING E + EA+ G +P +Y V+ C + R DA +M +M + G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N T++ +++ L K G E+A + K+M G P + +Y V+ + D A
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTVIDGLGKAGKTDEA 526
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + + M +G+ P +YS++ ++L E +++ + F + D IR L++ + +
Sbjct: 527 LELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISS 586
Query: 301 LRDEGMEETAV 311
L G E A+
Sbjct: 587 LCKRGETERAI 597
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 145/310 (46%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N L+ LC + E +E+ +M + D ++ IL++ + Q
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 382
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M G PDV++Y +IN C DEAV L + M A CKP+ +
Sbjct: 383 VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL S +R +A Q ++G T+N ++ C + A ++ +M G
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+T+EA + M K G P Y + +++
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK-GMSPNTIIYSSIASALSREGRINKV 561
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D ++ + +Y+ +I+SLC + + A ++ M+ G P ++ L +
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621
Query: 301 LRDEGMEETA 310
L EG + A
Sbjct: 622 LASEGFVKEA 631
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G P ++ +++ C+ A V + + R D+ + ++L Q +
Sbjct: 148 MPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 207
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R++ G EPDVVSY ++ C AKR+ EL EM C P+ F T
Sbjct: 208 VDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + Q + G P+ Y ++ C + A+ +++ M G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYG 327
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y+ +L L A R EE + M K V T+ I+V FC N VD
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV-TFNILVDFFCQNGLVDRV 386
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + ++M G +P + Y+T+IN C E +D+A + M G +P
Sbjct: 387 IELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 138/313 (44%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + N +++ +C V++A + + +PD+ SY +L+G K +
Sbjct: 187 GCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCV 246
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ EM P++V++ +I+ C ++ E+ +M C P ++ T+I+G
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDG 306
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ E L A + + G +P YN ++ C + R + ++ EM +
Sbjct: 307 ICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 366
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I++ + G + + ++M G P V TY V+ FC +D A+ +
Sbjct: 367 DVTFNILVDFFCQNGLVDRVIELLEQMLVH-GCMPDVITYTTVINGFCKEGLIDEAVMLL 425
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M A G P Y+ ++ LC ++ DA +M+ G F+ L L +
Sbjct: 426 KSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKK 485
Query: 305 GMEETAVVLAQKI 317
G+ E A+ L +++
Sbjct: 486 GLVEQAIELLKQM 498
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 35/245 (14%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQ 58
G ++ + +I+ CK ++ A + M P+ SYTI+L+G W
Sbjct: 397 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 456
Query: 59 KNLLS--------MN---------------------EVYREMKDDGFEPDVVSYGIMINA 89
++L+S +N E+ ++M +G PD++SY +I+
Sbjct: 457 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 516
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
A + DEA+EL M P+ I+ ++ + L E R+++ +Q F + +
Sbjct: 517 LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSD 576
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
A YNAV+ + C A + M G PN TY I++ L G +EA +
Sbjct: 577 AVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLT 636
Query: 210 RMSRK 214
+ K
Sbjct: 637 ELCSK 641
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 40/273 (14%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y M+ +C A + + A L A P+ + + ++ L + R+++AL +
Sbjct: 93 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKC--------------------- 179
+RG P P Y+ ++ A C A R+++++ R C
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 180 ------------GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
G P+ +Y+ VL L A R + + M R P + T+ +
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM-ACPPNIVTFNTL 268
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ C N + + +M G P + MY+T+I+ +C E L A + M G+
Sbjct: 269 ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328
Query: 288 RPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
+P ++ L + L E EET +LA+ DK
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDK 361
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 35/168 (20%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI+ LCK VE+A E+ +M PD+ SY+ +++G G+ E+ M
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 73 DDGFEP-----------------------------------DVVSYGIMINAHCSAKRYD 97
+ G P D V Y +I++ C +
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
A+E M ++ C P+ + LI GL SE + EA + + +G
Sbjct: 595 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 155/321 (48%), Gaps = 8/321 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I C+ V+ A EVFD MKK PD SY+IL++G +Q ++L+ ++ EM
Sbjct: 284 FNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMA 343
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G P +VSY +++ C A + + A ELFR +E K ++ ++NG +
Sbjct: 344 RNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIE 403
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ F P+A Y +++ A+C + DA + + M G+ PN T I++
Sbjct: 404 VVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILV 463
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K +EA+ +F R+ G P + Y +++ C + D I+ +M RG
Sbjct: 464 DGFGKERMIDEAF-LFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGY 522
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAV 311
+P +YS +I+S KL +A + F +MLD G +P +++L L D+ + E
Sbjct: 523 VPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVT 582
Query: 312 VLAQKI------DKLRKTPLV 326
+ I D++ T L+
Sbjct: 583 LFKHMIWEGLTPDRILYTSLI 603
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 153/324 (47%), Gaps = 5/324 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW--GQQKN 60
K G++ +L +F L+ L + + A+ +FD MK P++ SY++L+ + G +
Sbjct: 169 KVGVELQLCNF--LLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLY 226
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+ EM+ G +P+ +YG + ++ A + + + + F
Sbjct: 227 LAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNA 286
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G E ++ EA++ F KK G P+ +Y+ +V C + Y ++ EM + G
Sbjct: 287 VIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNG 346
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P +Y +LH L +AG+ E A+ +F+R+ + G + Y I++ C + +++
Sbjct: 347 IAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQ-GFKHDHIVYSIILNGCCQHLNIEVV 405
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+W++M +P + Y++LI + C L DA F+ MLD G+ P + L
Sbjct: 406 CDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDG 465
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
E M + A + K+ + P
Sbjct: 466 FGKERMIDEAFLFLHKVRQFGIVP 489
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 157/326 (48%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ L ++ L+ LC++ VE A E+F +++++ F D Y+I+L G Q N
Sbjct: 342 MARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLN 401
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +++ +M F PD +Y +I A C + +A+ +F M + P+
Sbjct: 402 IEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTI 461
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G G E+ + EA F + ++ G P Y ++ C + + + + +M K G
Sbjct: 462 LVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRG 521
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T Y I++ +KA + EA+ +F +M + GT+P V TY ++ C++ ++
Sbjct: 522 YVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDE-GTKPNVFTYTSLINGLCHDDRLPEV 580
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ M G+ P +Y++LI C + A + F+ M +G+ L++ L
Sbjct: 581 VTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGG 640
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
+ A L +++ TP V
Sbjct: 641 FSKVLAMDGAQCLMEEMTNKGLTPSV 666
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 1/217 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FG+ L + +I+ LCK + +F M KR + PD Y+I+++ + + L
Sbjct: 484 QFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLP 543
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ +M D+G +P+V +Y +IN C R E V LF+ M P ++ +LI
Sbjct: 544 EAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLI 603
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ AL+ F K G +A Y ++G + + ++ A +M+EM G+
Sbjct: 604 VCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLT 663
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
P+ TY ++ K G +A + M + G P
Sbjct: 664 PSVVTYTNLIIGYFKIGDERKANMTYNSM-LQAGITP 699
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 116/278 (41%), Gaps = 36/278 (12%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK------------ 59
++ LI C+ R++ A VF+ M P++ + TIL++G+G+++
Sbjct: 423 NYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKV 482
Query: 60 -----------------NLLSMNE------VYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
L +N+ ++ +M G+ PD V Y I+I++ A +
Sbjct: 483 RQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKL 542
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
EA LF +M KP+ + +LINGL + RL E + F G P+ Y ++
Sbjct: 543 PEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSL 602
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ YC + A + M K G+ + Y ++ K + A + + M+ K G
Sbjct: 603 IVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNK-G 661
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
P+V TY ++ + A ++ M G+ P
Sbjct: 662 LTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITP 699
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + ++ +ID+ K+ + A +F KM P++ +YT L+ G
Sbjct: 517 MIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDR 576
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +++ M +G PD + Y +I +C A+E+FR M ++
Sbjct: 577 LPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTC 636
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND---AYRMMDEMR 177
LI G + A + +G P TY ++ Y +I D A + M
Sbjct: 637 LIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGY---FKIGDERKANMTYNSML 693
Query: 178 KCGIGPNTR 186
+ GI P+ +
Sbjct: 694 QAGITPDAK 702
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI CK +++ A E+F M K D YT L+ G+ + +
Sbjct: 591 GLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGA 650
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM + G P VV+Y +I + +A + M P + C L G
Sbjct: 651 QCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCIL--G 708
Query: 125 LGSE 128
G++
Sbjct: 709 FGND 712
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 165/331 (49%), Gaps = 12/331 (3%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + +L F L+ +LC+ +HVE A+ +F KK F PDIKS ++L GW +L
Sbjct: 219 LGFELDLIAFQTLLMSLCRYKHVEMAEFLFHS-KKNEFPPDIKSMNVILNGWCVLGSLRE 277
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ ++ +PD +YGI IN+ A + AV+LF+ M C P I +I+
Sbjct: 278 AKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIID 337
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +KR+ EAL+ + +R +P+ TYN+++ C R Y ++D+M + G P
Sbjct: 338 ALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLP 397
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR- 242
N RTY +L + EE + +RM R G Y ++++++ + ++ +R
Sbjct: 398 NARTYGYLLK---STKKPEEVPGILERMERN-GCRMNSDCYNLILKLY-MDWGYELKLRS 452
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ---LFSNLKQ 299
DEM+ G+ P Y+ +I+ L + ++DDA YF++M +G+ P + L + +
Sbjct: 453 TLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNI 512
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L++ E K D +R P RG+
Sbjct: 513 KLKEREAEPEGKGARNKADSIR--PSTXRGK 541
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 35/264 (13%)
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN--------- 123
+ G+ P + +++ +R+ E +LF EM + F L+N
Sbjct: 148 ESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTE 207
Query: 124 ----------GLGSEKRL---------------SEALQFFGQSKKRGFEPEAPTYNAVVG 158
GLG E L E +F SKK F P+ + N ++
Sbjct: 208 EAVKIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILN 267
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
+C + +A R +++ P+ TY I ++ L KAG+ A +F+ M K G
Sbjct: 268 GWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEK-GCN 326
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V+ ++ C+ ++ A+ + EM R P + Y++LI LC + + +
Sbjct: 327 PDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYEL 386
Query: 279 FQEMLDIGIRPPGQLFSNLKQALR 302
+M G P + + L ++ +
Sbjct: 387 LDDMEQKGCLPNARTYGYLLKSTK 410
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 39/169 (23%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M++ + ++ +N LI LCK + E+ E+ D M+++ P+ ++Y LL+
Sbjct: 355 MNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEE 414
Query: 55 -----------------------------WGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
WG + L + EM+ +G PD +Y I
Sbjct: 415 VPGILERMERNGCRMNSDCYNLILKLYMDWGYE---LKLRSTLDEMERNGMGPDQRTYTI 471
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
MI+ R D+A+ F++M P P L+N + + + EA
Sbjct: 472 MIHGLYDKGRMDDALSYFKQMTLMGMVPEPRT-TLLVNAMNIKLKEREA 519
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 152/289 (52%), Gaps = 3/289 (1%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L N ++ LC + A EVF M F P++ SYTI+++G + + + +++
Sbjct: 171 LRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFK 229
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M D PDVV+YG +I+ +R EA +LF E A C P+ + T+I+GL
Sbjct: 230 QMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCG 289
Query: 130 RLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
R+ AL + ++ +P+ TY+A++ S R AY + +EM G P+ TY
Sbjct: 290 RIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTY 349
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ +L L K+G ++A +F++M +P V TY +++ FC ++ A+++ EM+
Sbjct: 350 NTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEME 409
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R +LP ++T+I LC E ++D+A + F E + +P LF+ +
Sbjct: 410 GRSLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPDSVLFNTM 457
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 159/341 (46%), Gaps = 36/341 (10%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ K+R VE A F K F+PD SY L+ G+ + ++ ++ EMKD
Sbjct: 106 NNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKD 165
Query: 74 DG---------------------------------FEPDVVSYGIMINAHCSAKRYDEAV 100
G F P+++SY IMI+ C +++ D+A+
Sbjct: 166 SGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAI 225
Query: 101 ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
LF++M P + LI+GLG ++R+ EA F +++ +G P TYN ++
Sbjct: 226 TLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGL 285
Query: 161 CWSMRINDAYRMMDEM-RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
C RI +A + D+M R+ + P+ TY +++ L + R E+AY +++ M G P
Sbjct: 286 CKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEM-LDTGCSP 344
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL-PVMHMYSTLINSLCHEDKLDDACKY 278
V TY ++ C + D AM I+ +M V P + Y+ LI+ C D+L DA K
Sbjct: 345 DVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKL 404
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+EM + P F+ + Q L E + A L + I K
Sbjct: 405 AKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGK 445
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L + +ID LCKSR V++A +F +M + PD+ +Y L++G G+Q+ + +++
Sbjct: 205 LISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFE 264
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSE 128
E + G P VV+Y MI+ C R + A+ L+ +M + KP + LINGL
Sbjct: 265 EARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLS 324
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM------------------------ 164
R +A + + + G P+ TYN ++ C S
Sbjct: 325 NRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVIT 384
Query: 165 ------------RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
R+ DA ++ EM + P+ T+ V+ L K R +EA+ +F+ +
Sbjct: 385 YTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG 444
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
+ +P + ++ +C ++D A ++ D M G P + Y+ L+ C +
Sbjct: 445 KT--CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRY 502
Query: 273 DDACKYFQEMLDIGIRPPGQL 293
DA + EM+++G P L
Sbjct: 503 SDALIMYHEMIEMGFPPERHL 523
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 109/207 (52%), Gaps = 2/207 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
LK ++ ++ LI+ L S E+A E++++M PD+ +Y LL+G +
Sbjct: 307 LKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAM 366
Query: 66 EVYREMK-DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++R+M + +P+V++Y ++I+ C R +AV+L +EME + P F T+I
Sbjct: 367 EIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQK 426
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E R+ EA + F +S + +P++ +N ++ YC RI+DA ++ D M G P
Sbjct: 427 LCKESRIDEAHELF-ESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPT 485
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRM 211
TY ++ + GR +A ++ M
Sbjct: 486 LATYTALVTGFCRTGRYSDALIMYHEM 512
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 2/188 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRF-DPDIKSYTILLEGWGQQKNLLS 63
G ++ +N L+D LCKS ++A E+F KM DP++ +YT+L++ + + L
Sbjct: 341 GCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGD 400
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ +EM+ PD V++ +I C R DEA ELF + T CKP +F T++
Sbjct: 401 AVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLA 459
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G R+ +A + + G P TY A+V +C + R +DA M EM + G P
Sbjct: 460 GYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519
Query: 184 NTRTYDIV 191
++V
Sbjct: 520 ERHLAELV 527
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 7/188 (3%)
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
P + +I+ + E Q+ G+ K F T N ++ Y + R+ DA+
Sbjct: 69 PDLVGKVIHRIPDPNTAWEVFQWAGKQSK--FTHNRFTCNNLLSVYVKARRVEDAHLFFQ 126
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
K P+ +Y+ +++ KAG ++A ++F M K + ++ IV+R C
Sbjct: 127 SHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM--KDSGIAVLRSHNIVLRGLCSG 184
Query: 235 AQVDMAMRIWDEMKARGVL-PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
++ MA ++ +M G+ P + Y+ +I+ LC K+D A F++M+D I P
Sbjct: 185 GKISMAWEVFKDMS--GIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVT 242
Query: 294 FSNLKQAL 301
+ L L
Sbjct: 243 YGALIDGL 250
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 161/318 (50%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + FN L+ L A++VFDKM + + PD++SYT L+ W +N
Sbjct: 290 MKKNGFDDGVESFNCLLVALANEGLGREARQVFDKMHGQ-YSPDLRSYTALMLAWCNARN 348
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V+ EM + G +PDVV + MI +R EA+++F M+A P+ +
Sbjct: 349 LVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTM 408
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++ A++ F + ++ +P+ TY ++ Y + R++ +++EM + G
Sbjct: 409 LIRDHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKG 468
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR-MFCYNAQVDM 239
P+ RTY+ ++ L ++A ++K+M +K G EPT+ TY ++++ F + M
Sbjct: 469 CPPDARTYNALIKLLTNRKMPDDAARIYKKMIKK-GLEPTIHTYNMMMKSYFLGDRNYAM 527
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W+EM RG+ P ++ Y+ IN + ++A KY +EM++ G+ P ++
Sbjct: 528 GCAVWEEMHRRGICPDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAA 587
Query: 300 ALRDEGMEETAVVLAQKI 317
G + LA K+
Sbjct: 588 DFSKAGKPDILYELALKV 605
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 142/313 (45%), Gaps = 5/313 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
++ L + +H R F + F +Y +L G+ + M + +EM
Sbjct: 199 VLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLHILGKTRQFEMMVAIIQEMGK 258
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G + ++ + I + +A AV +F M+ F L+ L +E E
Sbjct: 259 VG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCLLVALANEGLGRE 317
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A Q F + + + P+ +Y A++ A+C + + +A R+ +EM + G+ P+ ++ ++
Sbjct: 318 ARQVFDKMHGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIE 376
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L++ R EA +F+ M K G P V TY +++R C ++DMAM ++EM+
Sbjct: 377 GLLRGQRRPEALKMFELMKAK-GPPPNVWTYTMLIRDHCKRGKMDMAMECFEEMQEARCQ 435
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y+ L+ + ++D +EM G P + ++ L + L + M + A +
Sbjct: 436 PDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARI 495
Query: 314 AQKIDKLRKTPLV 326
+K+ K P +
Sbjct: 496 YKKMIKKGLEPTI 508
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 146/306 (47%), Gaps = 1/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID LCK + V A +++ +M R PD +YT L+ G+ L+ + EM
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMI 212
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P V Y I+INA C EA L M KP + TL++G +
Sbjct: 213 LKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQ 272
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A Q F + G P +YN ++ C R+++A ++ EM + P+T TY+ ++
Sbjct: 273 NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 332
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+GR A ++ M + G V TY ++ C N +D A ++ +MK RG+
Sbjct: 333 DGLCKSGRITSALNLMNEMHHR-GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P M+ Y+ LI+ LC +L +A + FQ +L G ++ + L EGM + A+
Sbjct: 392 QPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALA 451
Query: 313 LAQKID 318
+ K++
Sbjct: 452 IKSKME 457
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 139/275 (50%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ LCK +V+ A+ + M K P + +Y+ L++G+ + + +++ M
Sbjct: 223 YNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMV 282
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V SY IMIN C KR DEA+ L REM N P + +LI+GL R++
Sbjct: 283 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRIT 342
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL + RG + TY +++ A C + ++ A + +M++ GI P TY ++
Sbjct: 343 SALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALI 402
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR + A +F+ + K G V TY +++ C D A+ I +M+ G
Sbjct: 403 DGLCKGGRLKNAQELFQHLLVK-GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 461
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+P + +I SL +D+ D A K EM+ G+
Sbjct: 462 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 148/313 (47%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + L++ LCK A ++ ++ R P++ Y +++G + K +
Sbjct: 110 GFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEA 169
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y EM G PD ++Y +I C + A L EM N P +I+ LIN
Sbjct: 170 YDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINA 229
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E + EA K G +P TY+ ++ YC + +A ++ M + G+ PN
Sbjct: 230 LCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPN 289
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+I+++ L K R +EA ++ + M K TV TY ++ C + ++ A+ +
Sbjct: 290 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV-TYNSLIDGLCKSGRITSALNLM 348
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+EM RG + Y++L+++LC LD A F +M + GI+P ++ L L
Sbjct: 349 NEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKG 408
Query: 305 GMEETAVVLAQKI 317
G + A L Q +
Sbjct: 409 GRLKNAQELFQHL 421
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 142/306 (46%), Gaps = 3/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G+ + + LI C + A + D+M + +P + Y IL+ ++ N
Sbjct: 176 MDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGN 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M +G +P VV+Y +++ +C A ++F M P+ + +
Sbjct: 236 VKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNI 295
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL KR+ EA+ + + P+ TYN+++ C S RI A +M+EM G
Sbjct: 296 MINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY +L L K ++A ++F +M + G +PT+ TY ++ C ++ A
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKER-GIQPTMYTYTALIDGLCKGGRLKNA 414
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +G + Y+ +I+ LC E D+A +M D G P F + ++
Sbjct: 415 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 474
Query: 301 L--RDE 304
L +DE
Sbjct: 475 LFEKDE 480
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+K + ++ L+D C V+ A+++F M + +P++ SY I++ G + K
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 305
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + REM PD V+Y +I+ C + R A+ L EM + +
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + L +A F + K+RG +P TY A++ C R+ +A + + G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY +++ L K G +EA ++ +M G P T+EI++R + D A
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN-GCIPNAVTFEIIIRSLFEKDENDKA 484
Query: 241 MRIWDEMKARGVL 253
++ EM A+G+L
Sbjct: 485 EKLLHEMIAKGLL 497
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 142/369 (38%), Gaps = 78/369 (21%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ N LI+ C + + V K+ K + PD + L++G +
Sbjct: 36 MEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 95
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ GF+ D VSYG ++N C AV+L R +E
Sbjct: 96 VKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIE------------- 142
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
R P YN ++ C +N+AY + EM G
Sbjct: 143 ----------------------DRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180
Query: 181 IGPNTRT-----------------------------------YDIVLHHLIKAGRTEEAY 205
I P+ T Y+I+++ L K G +EA
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAK 240
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ M+ K G +P V TY ++ +C +V A +I+ M GV P ++ Y+ +IN
Sbjct: 241 NLLAVMT-KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMING 299
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL-------AQKID 318
LC ++D+A +EML + P +++L L G +A+ L Q D
Sbjct: 300 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 359
Query: 319 KLRKTPLVD 327
+ T L+D
Sbjct: 360 VVTYTSLLD 368
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 40 RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
R P I + +L + K L+ + ++M+ G + V+ I+IN C + +
Sbjct: 5 RHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFS 64
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ ++ +P TL+ GL + + ++L F + +GF+ + +Y ++
Sbjct: 65 FSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNG 124
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
C A +++ + PN Y+ ++ L K EAY ++ M + G P
Sbjct: 125 LCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR-GIFP 183
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
TY ++ FC Q+ A + DEM + + P +++Y+ LIN+LC E + +A
Sbjct: 184 DAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243
Query: 280 QEMLDIGIRPPGQLFSNL 297
M GI+P +S L
Sbjct: 244 AVMTKEGIKPGVVTYSTL 261
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 75/171 (43%), Gaps = 1/171 (0%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P +N ++G+ + A + +M GI N T +I+++ G+ ++SV
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
++ K G +P T +++ C +V ++ D++ A+G Y TL+N LC
Sbjct: 68 LGKI-LKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+ A K + + D RP +++ + L + + A L ++D
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMD 177
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 145/297 (48%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + +N ++ C S VE A + MK+++ +PD +Y L+ G +Q
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++++ EM G P V Y +I+ C+ D A EM P+ + +
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L E+R EA + +++G P+A TYN ++ YC A+ + DEM G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P +TY +LH L K R +EA +FK+++ + G P + ++ C N+ V A
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSE-GVLPDAIMFNALIDGHCSNSNVKGA 485
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ +M V P ++T++ C E K+++A + F EM GI+P F+ L
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTL 542
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + N L+ K E A ++ +M + R + ++ I++ ++
Sbjct: 177 MKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGK 236
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + M+ G +P++V+Y +++ +CS+ R + A + M+ +P + +
Sbjct: 237 LKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGS 296
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ + RL EA + F + ++G P A YN ++ +C ++ A DEM K G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY+ ++H L RT+EA + K + K G P TY I++ +C A A
Sbjct: 357 ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEK-GISPDAITYNILINGYCRCANAKKA 415
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ DEM A G+ P Y++L++ L ++++ +A F+++ G+ P +F+ L
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDG 475
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
+ A L + +D+++ P
Sbjct: 476 HCSNSNVKGAFELLKDMDRMKVPP 499
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 145/297 (48%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ +N LID C +++ A D+M K+ P + +Y L+ ++
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEA 380
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +E+++ G PD ++Y I+IN +C +A L EM A+ KP+ + +L++
Sbjct: 381 ECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHV 440
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R+ EA F + G P+A +NA++ +C + + A+ ++ +M + + P+
Sbjct: 441 LSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPD 500
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ + G+ EEA +F M R+ G +P ++ ++ + + A R+
Sbjct: 501 EVTFNTIMQGHCREGKVEEARELFDEMKRR-GIKPDHISFNTLISGYSRRGDIKDAFRVR 559
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+EM G P + Y+ L+ LC + D A + +EM+ G+ P + L + +
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 1/224 (0%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E + MK+ G P + + +++ R + A L+ EM K S + F +IN L
Sbjct: 172 ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL 231
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
E +L +A F G + G +P TYN +V YC S R+ A ++ M++ I P++
Sbjct: 232 CKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 291
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY ++ + K GR EEA +F+ M +K G P+ Y ++ FC +DMA D
Sbjct: 292 FTYGSLISGMCKQGRLEEASKIFEEMVQK-GLRPSAVIYNTLIDGFCNKGNLDMASAYKD 350
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM +G+ P M Y++LI++L E + D+A +E+ + GI P
Sbjct: 351 EMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISP 394
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 126/272 (46%), Gaps = 3/272 (1%)
Query: 54 GWGQQKNLLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
G G ++ + E +D GF+ +V + +I + C R DEA E F M+
Sbjct: 125 GGGTTNSIREIFEFLAASRDRLGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVL 183
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ +L++ R A + + + + T+N ++ C ++ A
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ M G+ PN TY+ ++H +GR E A ++ M R+ EP TY ++ C
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQK-IEPDSFTYGSLISGMC 302
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+++ A +I++EM +G+ P +Y+TLI+ C++ LD A Y EML GI P
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMS 362
Query: 293 LFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+++L AL E + A + ++I + +P
Sbjct: 363 TYNSLIHALFMEQRTDEAECMIKEIQEKGISP 394
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + L+ L K ++ A ++F K+ PD + L++G N+
Sbjct: 426 GIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGA 485
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ ++M PD V++ ++ HC + +EA ELF EM+ KP F TLI+G
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG 545
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A + + GF P TYNA+V C + + A ++ EM G+ P+
Sbjct: 546 YSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPD 605
Query: 185 TRTYDIVLHHLIKAGRTEE 203
TY ++ + K +E
Sbjct: 606 DTTYFTLIEGIAKVNIPDE 624
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 35/133 (26%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----- 55
MD+ + + FN ++ C+ VE A+E+FD+MK+R PD S+ L+ G+
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGD 551
Query: 56 --------------GQQKNLLSMN----------------EVYREMKDDGFEPDVVSYGI 85
G +L+ N E+ +EM G PD +Y
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611
Query: 86 MINAHCSAKRYDE 98
+I DE
Sbjct: 612 LIEGIAKVNIPDE 624
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 10/307 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ L +N +I+ C S AQ + +M +R+ PD+ ++++L+ ++
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y EM G P+ ++Y MI+ R D A +F M C P F
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G KR+ + ++ + +RG TY ++ +C +N A ++ EM G
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRM 230
+ PN T + +L L G+ ++A +FK M + EP V TY I++
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICG 513
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A +++EM RG++P Y+++I+ LC + +LD+A + F M G P
Sbjct: 514 LINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPD 573
Query: 291 GQLFSNL 297
F+ L
Sbjct: 574 VVTFTTL 580
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 2/279 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLS 63
GL+ + ++D +CK A + KM++ R P++ Y+ +++G +
Sbjct: 207 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTD 266
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM++ G P++ +Y MIN CS+ R+ EA L REM P F LIN
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L E + EA + + + RG P TYN+++ + R++ A RM M G P
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ T+ I++ A R ++ + MSR+ T+ TY ++ FC ++ A+ +
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTI-TYTTLIHGFCQLGNLNAALDL 445
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
EM + GV P + +TL++ LC+ KL DA + F+ M
Sbjct: 446 LQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 164/355 (46%), Gaps = 41/355 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G L F+ L+ LC V A F ++ K P++ ++T L+ G ++
Sbjct: 137 ITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLCREGR 192
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
++ + M +DG +P+ ++YG +++ C A+ L R+M E + KP+ I+
Sbjct: 193 VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYS 252
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--R 177
+I+GL + R ++A F + +++G P TYN ++ +C S R ++A R++ EM R
Sbjct: 253 AIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFER 312
Query: 178 KC---------------------------------GIGPNTRTYDIVLHHLIKAGRTEEA 204
K GI PNT TY+ ++ K R + A
Sbjct: 313 KMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAA 372
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+F M+ K G P V T+ I++ +C +VD M++ EM RG++ Y+TLI+
Sbjct: 373 ERMFYLMATK-GCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIH 431
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
C L+ A QEM+ G+ P + L L + G + A+ + + + K
Sbjct: 432 GFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQK 486
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 147/308 (47%), Gaps = 12/308 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +N +ID K ++ A+ +F M + PD+ +++IL++G+ K +
Sbjct: 348 GIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDG 407
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G + ++Y +I+ C + A++L +EM ++ P+ TL++G
Sbjct: 408 MKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDG 467
Query: 125 LGSEKRLSEALQFFGQSKK-----------RGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
L + +L +AL+ F +K EP+ TYN ++ + ++A +
Sbjct: 468 LCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELY 527
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+EM G+ P+T TY+ V+ L K R +EA +F M K G P V T+ ++ +C
Sbjct: 528 EEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK-GFSPDVVTFTTLINGYCK 586
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+V + ++ EM RG++ Y TLI+ C ++ A FQEM+ G+ P
Sbjct: 587 VGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTIT 646
Query: 294 FSNLKQAL 301
N+ L
Sbjct: 647 IRNMLTGL 654
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 139/282 (49%), Gaps = 12/282 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ F+ LID C ++ V+ ++ +M +R + +YT L+ G+ Q NL +
Sbjct: 383 GCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA 442
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-----------NCKP 113
++ +EM G P+VV+ +++ C+ + +A+E+F+ M+ + + +P
Sbjct: 443 LDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEP 502
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ LI GL +E + SEA + + + RG P+ TYN+V+ C R+++A +M
Sbjct: 503 DVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMF 562
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
D M G P+ T+ +++ K GR + VF M R+ G TY ++ FC
Sbjct: 563 DSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR-GIVANAITYRTLIHGFCQ 621
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
++ A+ I+ EM + GV P ++ L +++L A
Sbjct: 622 VGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 12/282 (4%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF +L+ + + + + KM+ RR +I S+TIL++ + L + ++
Sbjct: 78 DFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKI 137
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GF P +V++ +++ C R EA+ F ++ CKP+ F TL+NGL E R+
Sbjct: 138 TKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRV 193
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK----CGIGPNTRT 187
EA+ + + G +P TY +V C ++ D ++ +RK I PN
Sbjct: 194 VEAVALLDRMVEDGLQPNQITYGTIVDGMC---KMGDTVSALNLLRKMEEVSRIKPNVVI 250
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ L K GR +A ++F M K G P + TY ++ FC + + A R+ EM
Sbjct: 251 YSAIIDGLWKDGRQTDAQNLFSEMQEK-GISPNLFTYNCMINGFCSSGRWSEAQRLLREM 309
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
R + P + +S LIN+L E K +A + + EML GI P
Sbjct: 310 FERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 133/282 (47%), Gaps = 4/282 (1%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ ++ A ++F M + R P + + LL + + + ++R+M+ ++ S+
Sbjct: 55 KGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSF 114
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+I CS + A+ F ++ PS F TL++GL E R+SEAL FF Q K
Sbjct: 115 TILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK 174
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P + ++ C R+ +A ++D M + G+ PN TY ++ + K G T
Sbjct: 175 ----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 230
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++ ++M +P V Y ++ + + A ++ EM+ +G+ P + Y+ +I
Sbjct: 231 ALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMI 290
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
N C + +A + +EM + + P FS L AL EG
Sbjct: 291 NGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEG 332
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M + GL + LI C+ ++ A ++ +M P++ + LL+G G+
Sbjct: 414 MSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGK 473
Query: 58 QKNLLSMNEVYREMKDD--------GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
K+ L M +V ++ K D EPDV +Y I+I + ++ EA EL+ EM
Sbjct: 474 LKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHR 533
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
P + ++I+GL + RL EA Q F +GF P+ T+ ++ YC R+ D
Sbjct: 534 GLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDG 593
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ EM + GI N TY ++H + G A +F+ M
Sbjct: 594 LEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEM 635
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N +ID LCK ++ A ++FD M + F PD+ ++T L+ G+ + +
Sbjct: 534 GLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDG 593
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV+ EM G + ++Y +I+ C + A+++F+EM ++ P ++ G
Sbjct: 594 LEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTG 653
Query: 125 LGSEKRLSEALQ 136
L S++ L A+Q
Sbjct: 654 LWSKEELKRAVQ 665
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 35/243 (14%)
Query: 107 EATNCKPSPHIFCTL-------------INGLGSE-----------KRLSEALQFFGQSK 142
E+++ P+ +FCT G G E K L +A+ FG
Sbjct: 9 ESSSSVPAARLFCTRSIRHTLAKKSSGKAGGFGGERLKLQSGFHEIKGLDDAIDLFGYMV 68
Query: 143 KRGFEPEAPTYNAVVGAYCWSMR---INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ P + ++G R + +R M EMR+ I N ++ I++
Sbjct: 69 RSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKM-EMRR--IPCNIYSFTILIKCFCSCS 125
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+ A S F +++ K G P++ T+ ++ C +V A+ + ++ V+ +
Sbjct: 126 KLPFALSTFGKIT-KLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVIA----F 180
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+TL+N LC E ++ +A M++ G++P + + + G +A+ L +K+++
Sbjct: 181 TTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 240
Query: 320 LRK 322
+ +
Sbjct: 241 VSR 243
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
D G K PD F LI+ CK V EVF +M +R + +Y L+ G+ Q
Sbjct: 563 DSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQV 622
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
N+ ++++EM G PD ++ M+ S + AV+
Sbjct: 623 GNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665
>gi|414872586|tpg|DAA51143.1| TPA: empty pericarp4 [Zea mays]
Length = 595
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 5/289 (1%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
K+ HV A+++ ++++ R ++ YT LL GW +Q L V MK DVV
Sbjct: 167 KAGHVLTAEQLVEELQPR-LPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVV 225
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+ ++ + R+++A EL +ME C P+ + TLI GLG+ R+ EA++ F +
Sbjct: 226 VFNTLLAGFVAEGRFEDAFELAGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEM 285
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+++G P+A TY +V +C + +I+ Y +D M + G+ + Y K +
Sbjct: 286 RRKGCAPDAVTYGTLVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQL 345
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EE + +RM R+ P + Y +V+R+ C + AM +W+EM++ G+ PV+ ++
Sbjct: 346 EECLELMERM-RECRCPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTFAI 404
Query: 262 LINSLCHEDKLDDACKYFQEMLDIG--IRPPGQLFSNLKQAL-RDEGME 307
+++ L + L +AC YF++M+ G + P + +L AL RDE +E
Sbjct: 405 VVSGLVGQGLLIEACSYFKDMVGRGLFVVPQYGVLKDLLNALVRDEKLE 453
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 149/352 (42%), Gaps = 38/352 (10%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L L + L+ C+ ++ A+ V +MK D+ + LL G+ +
Sbjct: 185 LPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVVFNTLLAGFVAEGRFEDAF 244
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E+ +M+ G P+ VSY +I + R DEA+ +F EM C P + TL+N
Sbjct: 245 ELAGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVNTF 304
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++S+ +F + G +A Y+ A+ ++ + +M+ MR+C P+
Sbjct: 305 CKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDL 364
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
+ Y++V+ + G T++A +++ M G P V T+ IVV + A +
Sbjct: 365 KIYNVVIRLACRLGETKQAMTLWNEME-SAGLSPVVDTFAIVVSGLVGQGLLIEACSYFK 423
Query: 246 EMKARG--VLPVMHMYSTLINSLCHEDKLD------------------------------ 273
+M RG V+P + L+N+L ++KL+
Sbjct: 424 DMVGRGLFVVPQYGVLKDLLNALVRDEKLELAKDVWKCIVSKGCELNVSAWTIWIHALFA 483
Query: 274 -----DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+AC Y +ML+ G+ P F+ L + L+ + A + +K+ K+
Sbjct: 484 KKHVKEACLYCLDMLEAGLMPQPDTFAKLMKGLKKLYNRQIAAEITEKVRKM 535
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 85/183 (46%), Gaps = 5/183 (2%)
Query: 146 FEPEAPT----YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+P P Y A++ +C ++++A ++ M+ + + ++ +L + GR
Sbjct: 181 LQPRLPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVVFNTLLAGFVAEGRF 240
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
E+A+ + +M ++ G P +Y +++ +VD AMR++ EM+ +G P Y T
Sbjct: 241 EDAFELAGQMEQR-GCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGT 299
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
L+N+ C K+ ++ M G+R ++ A + E + L +++ + R
Sbjct: 300 LVNTFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECR 359
Query: 322 KTP 324
P
Sbjct: 360 CPP 362
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 165/331 (49%), Gaps = 12/331 (3%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + +L F L+ +LC+ +HVE A+ +F KK F PDIKS ++L GW +L
Sbjct: 219 LGFELDLIAFQTLLMSLCRYKHVEMAEFLFHS-KKNEFPPDIKSMNVILNGWCVLGSLRE 277
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ ++ +PD +YGI IN+ A + AV+LF+ M C P I +I+
Sbjct: 278 AKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIID 337
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +KR+ EAL+ + +R +P+ TYN+++ C R Y ++D+M + G P
Sbjct: 338 ALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLP 397
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR- 242
N RTY +L + EE + +RM R G Y ++++++ + ++ +R
Sbjct: 398 NARTYGYLLK---STKKPEEVPGILERMERN-GCRMNSDCYNLILKLY-MDWGYELKLRS 452
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ---LFSNLKQ 299
DEM+ G+ P Y+ +I+ L + ++DDA YF++M +G+ P + L + +
Sbjct: 453 TLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNI 512
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L++ E K D +R P RG+
Sbjct: 513 KLKEREAEPEGKGARNKADSIR--PSTRRGK 541
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 105/264 (39%), Gaps = 35/264 (13%)
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G+ P + +++ +R+ E +LF EM + F L+N + +
Sbjct: 148 ESGYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTE 207
Query: 133 EALQFFGQSKKRGFE----------------------------------PEAPTYNAVVG 158
EA++ F + K GFE P+ + N ++
Sbjct: 208 EAVKIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILN 267
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
+C + +A R +++ P+ TY I ++ L KAG+ A +F+ M K G
Sbjct: 268 GWCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEK-GCN 326
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V+ ++ C+ ++ A+ + EM R P + Y++LI LC + + +
Sbjct: 327 PDVAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYEL 386
Query: 279 FQEMLDIGIRPPGQLFSNLKQALR 302
+M G P + + L ++ +
Sbjct: 387 LDDMEQKGCLPNARTYGYLLKSTK 410
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 39/169 (23%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M++ + ++ +N LI LCK + E+ E+ D M+++ P+ ++Y LL+
Sbjct: 355 MNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLKSTKKPEE 414
Query: 55 -----------------------------WGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
WG + L + EM+ +G PD +Y I
Sbjct: 415 VPGILERMERNGCRMNSDCYNLILKLYMDWGYE---LKLRSTLDEMERNGMGPDQRTYTI 471
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
MI+ R D+A+ F++M P P L+N + + + EA
Sbjct: 472 MIHGLYDKGRMDDALSYFKQMTLMGMVPEPRT-TLLVNAMNIKLKEREA 519
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 154/311 (49%), Gaps = 1/311 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+G+ ++ +N LI K V A EV M+ + P++ SYTIL++G+ + +
Sbjct: 376 SYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKID 435
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ EM DG +P+ V + +I+A C R EAVE+FREM CKP + F +LI
Sbjct: 436 EAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 495
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL + AL G TYN ++ A+ I +A ++++EM G
Sbjct: 496 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSL 555
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+ TY+ ++ L +AG ++A S+F++M R G P+ + I++ C + V+ A+
Sbjct: 556 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GLVPSSISCNILINGLCRSGMVEEAVE 614
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
EM RG P + +++LIN LC +++D F+++ GI P ++ L L
Sbjct: 615 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLC 674
Query: 303 DEGMEETAVVL 313
G A +L
Sbjct: 675 KGGFVYDACLL 685
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 155/306 (50%), Gaps = 2/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVF-DKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN LI ++ A+ V D + PD+ +Y L+ G+ ++ + EV R+M
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
++ G +P+V SY I+++ C + DEA L EM A KP+ F LI+ E R+
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA++ F + ++G +P+ T+N+++ C I A ++ +M G+ NT TY+ +
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ ++ G +EA + M + G+ TY +++ C +VD A ++++M G
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQ-GSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
++P + LIN LC +++A ++ +EM+ G P F++L L G E +
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648
Query: 312 VLAQKI 317
+ +K+
Sbjct: 649 TMFRKL 654
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 6/306 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + LI +L K V A ++ ++M PD +++ ++ G +
Sbjct: 237 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 296
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M GF PD ++YG ++N C R D A +LF + KP+ IF T
Sbjct: 297 INEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNT 352
Query: 121 LINGLGSEKRLSEALQFFG-QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI+G + RL +A G P+ TYN+++ Y + A ++ +MR
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN +Y I++ K G+ +EAY++ MS G +P + ++ FC ++
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMS-ADGLKPNTVGFNCLISAFCKEHRIPE 471
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ I+ EM +G P ++ +++LI+ LC D++ A ++M+ G+ ++ L
Sbjct: 472 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 531
Query: 300 ALRDEG 305
A G
Sbjct: 532 AFLRRG 537
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 31/294 (10%)
Query: 42 DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
+P KSY ++LE V+ +M P + ++G+++ A C+ D A+
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
+ R+M C P+ I+ TLI+ L R++EALQ + G P+A T+N V+ C
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292
Query: 162 WSMRINDAYRMMDEMR-----------------KCGIG--------------PNTRTYDI 190
RIN+A +M++ M C IG P + ++
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNT 352
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++H + GR ++A +V M G P V TY ++ + V +A+ + +M+ +
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
G P ++ Y+ L++ C K+D+A EM G++P F+ L A E
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKE 466
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 141/313 (45%), Gaps = 6/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L++ LCK V+ A+++F ++ K P + L+ G+ L V +M
Sbjct: 319 YGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMV 374
Query: 73 DD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G PDV +Y +I + A+E+ R+M CKP+ + + L++G ++
Sbjct: 375 TSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKI 434
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA + G +P +N ++ A+C RI +A + EM + G P+ T++ +
Sbjct: 435 DEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 494
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L + + A + + M + G TY ++ F ++ A ++ +EM +G
Sbjct: 495 ISGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 553
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
L Y++LI LC ++D A F++ML G+ P + L L GM E AV
Sbjct: 554 SLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAV 613
Query: 312 VLAQKIDKLRKTP 324
+++ TP
Sbjct: 614 EFQKEMVLRGSTP 626
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 123/273 (45%), Gaps = 1/273 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK FN LI CK + A E+F +M ++ PD+ ++ L+ G +
Sbjct: 444 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 503
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R+M +G + V+Y +INA EA +L EM + +
Sbjct: 504 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNS 563
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL + +A F + + G P + + N ++ C S + +A EM G
Sbjct: 564 LIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++ +++ L +AGR E+ ++F+++ + G P TY ++ C V A
Sbjct: 624 STPDIVTFNSLINGLCRAGRIEDGLTMFRKL-QAEGIPPDTVTYNTLMSWLCKGGFVYDA 682
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
+ DE G +P +S L+ SL ++ LD
Sbjct: 683 CLLLDEGIEDGFVPNDRTWSILLQSLVPQETLD 715
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 7/279 (2%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM- 106
Y +L+ G +++ + +MKD+G + ++ + A + L EM
Sbjct: 108 YQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 167
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+C+P+ + ++ L S A F R P T+ V+ A C +
Sbjct: 168 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEV 227
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+ A ++ +M K G PN+ Y ++H L K R EA + + M G P T+
Sbjct: 228 DSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM-GCVPDAETFND 286
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
V+ C +++ A ++ + M RG P Y L+N LC ++D A F +
Sbjct: 287 VILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI---- 342
Query: 287 IRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTP 324
+P +F+ L G +++ VL+ + P
Sbjct: 343 PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 381
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 80/191 (41%), Gaps = 4/191 (2%)
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQS-KKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
K +P C L L +S +++ F + ++G+ Y ++G +
Sbjct: 69 KITPFQLCKL---LELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTID 125
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
R++ +M+ GI + ++ KAG + + M EPT +Y +V+ +
Sbjct: 126 RLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 185
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+A ++ +M +R + P + + ++ +LC +++D A ++M G P
Sbjct: 186 LVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPN 245
Query: 291 GQLFSNLKQAL 301
++ L +L
Sbjct: 246 SVIYQTLIHSL 256
>gi|242038267|ref|XP_002466528.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
gi|241920382|gb|EER93526.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
Length = 595
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 152/289 (52%), Gaps = 5/289 (1%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
K+ HV A+++ ++ + RF ++ YT LL GW +Q L V MK DVV
Sbjct: 167 KAGHVVTAEQLVEE-PQTRFPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVV 225
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
++ ++ + R+++A EL +ME C P+ + TLI GLG+ R+ EA++ F +
Sbjct: 226 AFNTLLAGFVADGRFEDAFELTGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEM 285
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+++G P+A TY +V +C + +I+ Y +D + + G+ + Y K +
Sbjct: 286 RRKGCAPDAVTYGTLVSTFCKAGKISQGYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQL 345
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EE + +RM R+ P + Y +V+R+ C + AM +W+EM+ G+ P + ++
Sbjct: 346 EECLELMERM-RECRCPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGGLSPGVDTFAI 404
Query: 262 LINSLCHEDKLDDACKYFQEMLDIG--IRPPGQLFSNLKQAL-RDEGME 307
++N L + L +AC YF++M+ G + P + +L AL RDE +E
Sbjct: 405 MVNGLVGQGLLVEACSYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLE 453
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 147/348 (42%), Gaps = 38/348 (10%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L + L+ C+ ++ A+ V +MK D+ ++ LL G+ E+
Sbjct: 189 LRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVAFNTLLAGFVADGRFEDAFELTG 248
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M+ G P+ VSY +I + R DEA+ +F EM C P + TL++
Sbjct: 249 QMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVSTFCKAG 308
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++S+ +F + G +A Y+ A+ ++ + +M+ MR+C P+ + Y+
Sbjct: 309 KISQGYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIYN 368
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+V+ + G T++A S++ M G P V T+ I+V + A + +M
Sbjct: 369 VVIRLACRLGETKQAMSLWNEMETG-GLSPGVDTFAIMVNGLVGQGLLVEACSYFKDMVG 427
Query: 250 RG--VLPVMHMYSTLINSLCHEDKLD---------------------------------- 273
RG V P + L+N+L ++KL+
Sbjct: 428 RGLFVAPQYGVLKDLLNALVRDEKLELAKDVWECIASKGCELNVSAWTIWIHALYAKKHV 487
Query: 274 -DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+AC Y +ML+ G+ P F+ L + L+ + A + +K+ K+
Sbjct: 488 KEACLYCLDMLEAGVMPQPDTFAKLMKGLKKLYNRQIAAEITEKVRKM 535
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
Y A++ +C ++++A ++ M+ + + ++ +L + GR E+A+ + +M
Sbjct: 192 YTALLYGWCRQGKLDEAKHVLARMKAADVALDVVAFNTLLAGFVADGRFEDAFELTGQME 251
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
++ G P +Y +++ +VD AMR++ EM+ +G P Y TL+++ C K+
Sbjct: 252 QR-GCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVSTFCKAGKI 310
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++ + G+R ++ A + E + L +++ + R P
Sbjct: 311 SQGYEFLDAISRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPP 362
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 154/296 (52%), Gaps = 1/296 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN +I +C+ + ++A E+ ++M + PD ++ IL++G + K + +EV R +
Sbjct: 217 SFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRL 276
Query: 72 KDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ DG P+ V+Y +I+ +C A + ++A+ ++ +M + +P+ + LING G
Sbjct: 277 QRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALD 336
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ A++ + Q R P+ T+++++ YC +++DA R+ EM I PN T+ I
Sbjct: 337 MESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSI 396
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++H L K R+ EA + + ++ + P Y V+ + C +VD A I +MK +
Sbjct: 397 IIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEK 456
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
G P + Y+ LI C + ++ +A F +M++ G RP ++ + GM
Sbjct: 457 GCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGM 512
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 148/310 (47%), Gaps = 4/310 (1%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
+ +I LC+S A ++FD+M + + P+ ++ + L + + + +
Sbjct: 110 SYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLTK 169
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE-MEATNCKPSPHIFCTLINGLGSEK 129
G + +Y ++N+ + R +AV LF ++ P F +I G+
Sbjct: 170 GSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMG 229
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-PNTRTY 188
+AL+ + + G P+ T+N +V C + ++N + ++ +++ G+ PN TY
Sbjct: 230 NFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTY 289
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
V+ KAG+ E+A SV+ M + GT P TY +++ + ++ A+R++ ++
Sbjct: 290 TSVISGYCKAGKMEDAMSVYNDM-LESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLI 348
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
R P + +S+LI+ C +LDDA + ++EM I+P FS + +L +
Sbjct: 349 LRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSA 408
Query: 309 TAVVLAQKID 318
A+ + ++++
Sbjct: 409 EALDILRELN 418
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 103/204 (50%), Gaps = 1/204 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LI+ K+ +E A ++ ++ R PD+ +++ L++G+ +
Sbjct: 312 MLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQ 371
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFC 119
L +++EM +P+V ++ I+I++ C R EA+++ RE+ T+ P I+
Sbjct: 372 LDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYN 431
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L ++ EA K++G P+ TY ++ +C RI +A + +M +
Sbjct: 432 PVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEA 491
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEE 203
G P+ T + + ++KAG E
Sbjct: 492 GCRPDNITVNSFVSCVLKAGMPNE 515
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 155/307 (50%), Gaps = 4/307 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD F+ L++ LCK A E+ + M + P++ +YTIL++G+ ++ L
Sbjct: 379 VPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGL 438
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ REM GF + V Y +I+A C + EA+++F EM + CKP F +LI GL
Sbjct: 439 ILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLC 498
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ +AL + G + T+N ++ A+ I +A +++++M G +
Sbjct: 499 RVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEI 558
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++ L K G E+ +F+ M RK G P++ T I++ FC +V A+ +
Sbjct: 559 TYNGLIKALCKTGAVEKGLGLFEEMIRK-GLTPSIITCNILINGFCTAGKVHNALEFMRD 617
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M RG P + Y++LIN LC ++ +A F+++ GI+P ++ L L EG
Sbjct: 618 MIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGA 677
Query: 307 EETAVVL 313
+ A L
Sbjct: 678 FDDACFL 684
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 157/328 (47%), Gaps = 11/328 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + LID L K V+ A ++ ++M PD+ ++ ++ G+ +
Sbjct: 236 MTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNR 295
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--F 118
+L ++ M GF P+ ++YG +++ C R DEA L ++ P P++ F
Sbjct: 296 VLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV------PGPNVVHF 349
Query: 119 CTLINGLGSEKRLSEALQF-FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
TL+NG RL+EA F + + G+ P+ T++ +V C A ++++M
Sbjct: 350 NTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMD 409
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G PN TY I++ K G+ EEA + + M K + TV Y ++ C + ++
Sbjct: 410 AKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVG-YNALISALCKHGKI 468
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A+ ++ EM ++G P + +++LI LC D+++DA +++M+ G+ F+ L
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTL 528
Query: 298 KQALRDEGMEETAVVLAQKIDKLRKTPL 325
A G + A+ L + R PL
Sbjct: 529 IHAFLRRGEIQEALKLVNDM-LFRGCPL 555
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G K L + LID CK +E A + +M + F + Y L+ +
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G +PD+ ++ +I C ++A+ L+R+M + F T
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNT 527
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ + EAL+ RG + TYN ++ A C + + + +EM + G
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T +I+++ AG+ A + M + G P + TY ++ C ++ A
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHR-GFSPDIVTYNSLINGLCKRGRIQEA 646
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ ++++++A G+ P Y+TLI LC E DDAC ++ G P
Sbjct: 647 LNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVP 695
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 152/306 (49%), Gaps = 2/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQE-VFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN L++ ++ + A V+DKM + PD+ +++ L+ G ++ S E+ +M
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G +P++ +Y I+I+ C + +EA + REM + + LI+ L ++
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKI 468
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EAL FG+ +G +P+ T+N+++ C + DA + +M G+ N+ T++ +
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTL 528
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H ++ G +EA + M + G TY +++ C V+ + +++EM +G
Sbjct: 529 IHAFLRRGEIQEALKLVNDMLFR-GCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ P + + LIN C K+ +A ++ ++M+ G P +++L L G + A+
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEAL 647
Query: 312 VLAQKI 317
L +K+
Sbjct: 648 NLFEKL 653
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 137/280 (48%), Gaps = 7/280 (2%)
Query: 42 DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
+P +SY ++L+ + V+ +M G P+ ++G+++ A C D A
Sbjct: 172 EPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACL 231
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L R+M C P+ I+ TLI+ L R+ EAL+ + G P+ T+N V+ +C
Sbjct: 232 LLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFC 291
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
R+ + +++D M G PN TY ++H L K R +EA ++ +S+ PG P V
Sbjct: 292 RLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQAL---LSKVPG--PNV 346
Query: 222 STYEIVVRMFCYNAQVDMAMR-IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
+ +V F N +++ A ++D+M G +P + +STL+N LC + A +
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVN 406
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDK 319
+M G +P ++ L +G +EE ++L + + K
Sbjct: 407 DMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTK 446
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LCK+ VE+ +F++M ++ P I + IL+ G+ + + E R+M
Sbjct: 560 YNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMI 619
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF PD+V+Y +IN C R EA+ LF +++A +P + TLI L E
Sbjct: 620 HRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFD 679
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVV 157
+A + + GF P T+N +V
Sbjct: 680 DACFLLYRGVENGFVPNDVTWNILV 704
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI + ++ A ++ + M R D +Y L++ + + ++ EM
Sbjct: 525 FNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMI 584
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P +++ I+IN C+A + A+E R+M P + +LINGL R+
Sbjct: 585 RKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQ 644
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL F + + G +P++ TYN ++ C +DA ++ + G PN T++I++
Sbjct: 645 EALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILV 704
Query: 193 HHLIKAGRTEEAYSVFKRMS 212
++ K +E + + S
Sbjct: 705 YNFGKQSNSEGQTITYAQFS 724
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 8/282 (2%)
Query: 1 MDKFGLKQELPDFNRLID-TLCK----SRHVERAQEVFD-KMKKRRFDPDIKSYTILLEG 54
+ F LK+ FN++ LCK VE + E+F ++ + Y +L++
Sbjct: 54 LKPFDLKELRRSFNKITPFQLCKLLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDK 113
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC-KP 113
G ++ + +MK++G + +++ + A +A L +M+ C +P
Sbjct: 114 LGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEP 173
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
S + +++ L S A F +G P T+ V+ A C +++A ++
Sbjct: 174 SFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLL 233
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+M K G PN+ Y ++ L K R +EA + + M G P V+T+ V+ FC
Sbjct: 234 RDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLM-GCPPDVNTFNTVIYGFCR 292
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+V ++ D M +G P Y L++ LC ++D+A
Sbjct: 293 LNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEA 334
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 72/147 (48%)
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
R++ +M++ GI + +++ + +AG +A + M EP+ +Y +V+ +
Sbjct: 125 RLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDV 184
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+A ++ +M ++GV P + + ++ +LC +++D+AC ++M G P
Sbjct: 185 LVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPN 244
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKI 317
++ L AL + A+ L +++
Sbjct: 245 SMIYQTLIDALSKRDRVDEALKLLEEM 271
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 153/295 (51%), Gaps = 1/295 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I +C+ ++++A E+ ++M + PD + IL++G + K + +EV R ++
Sbjct: 85 FNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQ 144
Query: 73 DDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
DG P+VV+Y +I+ +C A R +A ++ +M + +P+ + LING G +
Sbjct: 145 RDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDM 204
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A++ + Q P+ T+N+++ YC +++DA R+ EM + I PN T+ I+
Sbjct: 205 ESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSII 264
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H L R+ EA S+ + ++ + P Y ++ + C +VD A I +M+ +G
Sbjct: 265 IHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKG 324
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
P + Y+ LI C + ++ +A F +M++ G RP ++ + GM
Sbjct: 325 CHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKAGM 379
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 126/256 (49%), Gaps = 3/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQK 59
M +FG + N L+D LC+ + V + EV ++++ P++ +YT ++ G+ +
Sbjct: 108 MTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAG 167
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ VY +M G P+ V+Y ++IN + A + AV ++ ++ +C P F
Sbjct: 168 RMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFN 227
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-K 178
+LI+G +L +A++ + + + +P T++ ++ + C R +A ++ E+ +
Sbjct: 228 SLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMR 287
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P T Y+ ++ L K G+ +EA + M K G P TY I++ C ++
Sbjct: 288 ADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEK-GCHPDKYTYTILIIGHCMKGRIP 346
Query: 239 MAMRIWDEMKARGVLP 254
A+ ++ +M G P
Sbjct: 347 EAVTLFHKMVETGCRP 362
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 82 SYGIMINAHCSAKRYDEAVELFRE-MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
+Y ++N + R +AV LF ++ P F +I G+ L +AL+ +
Sbjct: 48 AYNNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVER 107
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-PNTRTYDIVLHHLIKAG 199
+ G P+ T N +V C ++N + ++ +++ G+ PN TY V+ KAG
Sbjct: 108 MTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAG 167
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
R ++A+SV+ M + GT P TY +++ + ++ A+R++ ++ P + +
Sbjct: 168 RMKDAFSVYNDM-LQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTF 226
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
++LI+ C +LDDA + + EM I+P FS + +L + A+ L ++++
Sbjct: 227 NSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELN 285
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LI+ K+ +E A ++ ++ PD+ ++ L++G+ +
Sbjct: 179 MLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQ 238
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFC 119
L ++ EM +P+V ++ I+I++ C+ R EA+ L RE+ + P I+
Sbjct: 239 LDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYN 298
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L ++ EA +++G P+ TY ++ +C RI +A + +M +
Sbjct: 299 PIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVET 358
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
G P+ T + + ++KAG E + + S V +++
Sbjct: 359 GCRPDNITINSFISCVLKAGMPNEVHQIMLIASGHASASQKVHSHQ 404
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 100/224 (44%), Gaps = 1/224 (0%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G+ PD + + + +A D A L + C+ + + L+N L + R +A
Sbjct: 6 GYVPDAGFFSFVAGSCTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDA 65
Query: 135 LQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ F + G + P+ ++N V+ C + A +++ M + G P+T T +I++
Sbjct: 66 VALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVD 125
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L + + + + V +R+ R P V TY V+ +C ++ A ++++M G
Sbjct: 126 GLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTR 185
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P Y+ LIN ++ A + + +++ P F++L
Sbjct: 186 PNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSL 229
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 151/307 (49%), Gaps = 4/307 (1%)
Query: 10 LPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LP F + LI+ ++ + V + KR F ++ I+L+G + +
Sbjct: 106 LPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMG 165
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ REM PD+VSY +IN C AK+ EAV L EMEA C P+ TL++GL
Sbjct: 166 LIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLC 225
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ R+ EA++ KK+GF+ + Y ++ +C + ++ + DEM GI N
Sbjct: 226 KDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVV 285
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++H L + G+ +EA +V M+ G P V TY ++ C + + AM + +
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMAEH-GIHPDVVTYTGLIDGLCKDGRATHAMDLLNL 344
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M +G P Y+ L++ LC E + DA K + M++ G + ++ L + L D+G
Sbjct: 345 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGK 404
Query: 307 EETAVVL 313
+ A+ L
Sbjct: 405 VDEALKL 411
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 169/383 (44%), Gaps = 54/383 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G ++ + LI C + +++R +E+FD+M + ++ +Y+ L+ G +
Sbjct: 240 MKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 299
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-----EATN----- 110
N V M + G PDVV+Y +I+ C R A++L M E +N
Sbjct: 300 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 359
Query: 111 -----CKPSPHI--------------------FCTLINGLGSEKRLSEALQFFGQ--SKK 143
CK I + TL+ GL + ++ EAL+ F +
Sbjct: 360 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 419
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
EP T+N ++G C R+ A ++ +M K G N TY+++L +KAG+ +E
Sbjct: 420 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKE 479
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++K++ G P TY I++ FC +++A ++ EM+ G+ P + Y+TL+
Sbjct: 480 AMELWKQV-LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLM 538
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRP----------------PGQLFSNLKQALRDEGME 307
SLC E L+ A FQEM + P Q L+ + + G+
Sbjct: 539 ASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR 598
Query: 308 ETAVVLAQKIDKLRKTPLVDRGQ 330
A+ + I++L K +D +
Sbjct: 599 PDALTFSTLINRLSKLGELDEAK 621
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 1/283 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+D LCK ++ A E+ + MKK+ FD D+ Y L+ G+ NL E++ EM G
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+VV+Y +++ C ++ EA + M P + LI+GL + R + A+
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 339
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
++G EP TYN ++ C + DA++++ M + G + TY+ ++ L
Sbjct: 340 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399
Query: 196 IKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
G+ +EA +F M + EP V T+ +++ C ++ A++I +M +G
Sbjct: 400 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 459
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ Y+ L+ K+ +A + ++++LD+G P +S L
Sbjct: 460 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSIL 502
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 3 KFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
+ G K PD +N LI+ LCK++ ++ A + +M+ P+ + T L++G +
Sbjct: 169 EMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDG 228
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ E+ MK GF+ DVV YG +I+ C+ D ELF EM + +
Sbjct: 229 RMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYS 288
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L++GL + EA + G P+ TY ++ C R A +++ M +
Sbjct: 289 CLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEK 348
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ TY+++L L K G +A+ + + M K G + V TY +++ C +VD
Sbjct: 349 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK-GKKADVVTYNTLMKGLCDKGKVDE 407
Query: 240 AMRIWDEM--KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
A+++++ M + P + ++ LI LC E +L A K ++M+ G
Sbjct: 408 ALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG 456
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 119/257 (46%), Gaps = 1/257 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LCK + +A ++ KM K+ ++ +Y +LL G + + E+++++
Sbjct: 429 FNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVL 488
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D GF P+ +Y I+I+ C + + A LF EM P+ + TL+ L E L
Sbjct: 489 DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 548
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F + EP+ ++N ++ + + +M + G+ P+ T+ ++
Sbjct: 549 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 608
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K G +EA S +RM G P Y+ +++ + + +M A+G
Sbjct: 609 NRLSKLGELDEAKSALERMV-ASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 667
Query: 253 LPVMHMYSTLINSLCHE 269
+ + ST++ LCH
Sbjct: 668 VLDRKIVSTILTCLCHS 684
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 131/303 (43%), Gaps = 38/303 (12%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM--KKRRFDPDIKSYTILLEGWGQQKNLL 62
G K ++ +N L+ LC V+ A ++F+ M + +P++ ++ +L+ G ++ L
Sbjct: 384 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 443
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+++R+M G ++V+Y +++ A + EA+EL++
Sbjct: 444 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWK------------------ 485
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
Q GF P + TY+ ++ +C +N A + EMR G+
Sbjct: 486 -----------------QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN 528
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P Y+ ++ L K G E+A S+F+ M EP + ++ ++
Sbjct: 529 PALFDYNTLMASLCKEGSLEQAKSLFQEMGN-ANCEPDIISFNTMIDGTLKAGDFQFVKE 587
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ +M G+ P +STLIN L +LD+A + M+ G P ++ +L + L
Sbjct: 588 LQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLS 647
Query: 303 DEG 305
+G
Sbjct: 648 SKG 650
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 112/238 (47%), Gaps = 5/238 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G L +N L+ K+ ++ A E++ ++ F P+ +Y+IL++G+ + +
Sbjct: 452 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 511
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM+ G P + Y ++ + C ++A LF+EM NC+P F T
Sbjct: 512 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 571
Query: 121 LINGL--GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+G + + + LQ + + G P+A T++ ++ +++A ++ M
Sbjct: 572 MIDGTLKAGDFQFVKELQM--KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 629
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G P+ YD +L L G T E ++ +M+ K GT ++ C++ Q
Sbjct: 630 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK-GTVLDRKIVSTILTCLCHSIQ 686
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL L D+N L+ +LCK +E+A+ +F +M +PDI S+ +++G + +
Sbjct: 522 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 581
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M + G PD +++ +IN DEA M A+ P ++ +
Sbjct: 582 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 641
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
L+ GL S+ +E + Q +G + + ++ C S++ D ++
Sbjct: 642 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 1/190 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ +EA+ F + P T N +V A S A+ + M + P+ +
Sbjct: 54 QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLS 113
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ A + + + V + K G V IV++ C N V AM + EM
Sbjct: 114 ALIECFADAQKPQLGFGVVG-LVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR 172
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+ V P + Y+TLIN LC KL +A EM G P + L L +G +
Sbjct: 173 KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDE 232
Query: 310 AVVLAQKIDK 319
A+ L + + K
Sbjct: 233 AMELLEAMKK 242
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 163/316 (51%), Gaps = 1/316 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GL+ + F+ LI+ C + RA E+FD M R + P++ SY+I+++G +
Sbjct: 154 KLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTT 213
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ ++ MK G EPDVV Y +++ C + +EAV +F +M+ T P+ + +LI
Sbjct: 214 EVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLI 273
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL + R EA + K P+ ++ ++ C +++A ++ M + G+
Sbjct: 274 HGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVE 333
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ TY+ +++ EA VF+ M K G P V ++ I+V +C ++D A +
Sbjct: 334 PDVATYNTLMNGYCLRMEVVEARKVFEVMISK-GRMPDVFSFSILVNGYCKAKRIDEAKQ 392
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++DEM RG++P Y+TLI+ LC + +A + F++M G P +S L L
Sbjct: 393 LFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLS 452
Query: 303 DEGMEETAVVLAQKID 318
+G + A+ L + ++
Sbjct: 453 KQGYLDQAMGLFRAME 468
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 158/312 (50%), Gaps = 5/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ ++ LI+ C+ HV+ V K+ K +P++ +++ L+ G+ +
Sbjct: 117 MEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGK 176
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ M G++P+V SY I+I C + E ++L M+ C+P I+ T
Sbjct: 177 IGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNT 236
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ L ++ ++EA+ F + K G P TY +++ R +A+ +++EM+
Sbjct: 237 IVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGN 296
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + +++ + K G EA + K M+ G EP V+TY ++ +C +V A
Sbjct: 297 IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEM-GVEPDVATYNTLMNGYCLRMEVVEA 355
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP----GQLFSN 296
++++ M ++G +P + +S L+N C ++D+A + F EM G+ P L S
Sbjct: 356 RKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISG 415
Query: 297 LKQALRDEGMEE 308
L QA R EE
Sbjct: 416 LCQARRPLEAEE 427
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 10/256 (3%)
Query: 2 DKFGLKQEL------PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ FGL E+ PD F+ LID +CK V A+ + M + +PD+ +Y L+
Sbjct: 284 EAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
G+ + ++ +V+ M G PDV S+ I++N +C AKR DEA +LF EM
Sbjct: 344 NGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLI 403
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P + TLI+GL +R EA + F G+ P TY+ ++ ++ A +
Sbjct: 404 PDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGL 463
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
M G+ P+ TY+I++ + K G+ ++A +F +S K G +P + C
Sbjct: 464 FRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVK-GLQPNNWVCTPTIDGVC 522
Query: 233 YNAQVDMAMRIWDEMK 248
+D A + + +M+
Sbjct: 523 KGGLLDEAHKAFRQME 538
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 133/290 (45%), Gaps = 3/290 (1%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
R++ A F+ M P I + L + K+ ++ + ++M+ G DV+S
Sbjct: 70 RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I+IN C D + ++ +P+ F TLING E ++ A++ F
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
RG++P +Y+ ++ C + + ++++ M+ G P+ Y+ ++ L K E
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A +F +M + G PTV TY ++ + A + +EMK ++P + +S LI
Sbjct: 250 AVHIFCKM-KGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA--LRDEGMEETAV 311
+ +C E ++ +A + M ++G+ P ++ L LR E +E V
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKV 358
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 110/213 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ ++ +N L++ C V A++VF+ M + PD+ S++IL+ G+ + K
Sbjct: 327 MTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKR 386
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G PD VSY +I+ C A+R EA ELF++M + P+ +
Sbjct: 387 IDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSI 446
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + L +A+ F + G +P+ TYN ++ C + DA + E+ G
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
+ PN + + K G +EA+ F++M +
Sbjct: 507 LQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+N+ + M + P +V +G + +A K Y V L ++ME
Sbjct: 70 RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LIN + G+ K G EP T++ ++ +C +I A + D M
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G PN +Y I++ L + G+T E + + M + G EP V Y +V C + V+
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHM-KVVGCEPDVVIYNTIVDRLCKDRLVN 248
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A+ I+ +MK G+LP + Y++LI+ L + + +A EM I P FS L
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP 324
+ EG A V+ + + ++ P
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEP 334
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + +N LI LC++R A+E+F M + P++ +Y+ILL+ +Q
Sbjct: 397 MTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGY 456
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++R M++ G +PD+V+Y IMI+ C ++ +A ELF E+ +P+ +
Sbjct: 457 LDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTP 516
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
I+G+ L EA + F Q +K P N
Sbjct: 517 TIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCING 551
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 146/305 (47%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + FN LI LC++ ER EV +M + PDI+ Y +++G ++ +
Sbjct: 290 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 349
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +E+ M G +P+VV Y ++ CSA+R++E EL EM +C F
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 409
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ + ++ Q + G P+ TY V+ +C I++A ++ M CG
Sbjct: 410 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT +Y IVL L A R +A + +M ++ G T+ ++ C V+ A
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQ-GCPLNPITFNTLINFLCKKGLVEQA 528
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +M G P + YST+I+ L K D+A + M++ G+ P ++S++ A
Sbjct: 529 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 588
Query: 301 LRDEG 305
L EG
Sbjct: 589 LSREG 593
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 144/311 (46%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + +ID +CK H+E A E+ ++M P++ Y LL+G +
Sbjct: 325 MVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAER 384
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM D D V++ I+++ C D +EL +M C P + T
Sbjct: 385 WEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTT 444
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ING E + EA+ G +P +Y V+ C + R DA +M +M + G
Sbjct: 445 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 504
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N T++ +++ L K G E+A + K+M G P + +Y V+ + D A
Sbjct: 505 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN-GCSPDLISYSTVIDGLGKAGKTDEA 563
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + + M +G+ P +YS++ ++L E +++ + F + D IR L++ + +
Sbjct: 564 LELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISS 623
Query: 301 LRDEGMEETAV 311
L G E A+
Sbjct: 624 LCKRGETERAI 634
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N L+ LC + E +E+ +M + D ++ IL++ + Q
Sbjct: 360 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 419
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M + G PDV++Y +IN C DEAV L + M A CKP+ +
Sbjct: 420 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 479
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL S +R +A Q ++G T+N ++ C + A ++ +M G
Sbjct: 480 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 539
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+T+EA + M K G P Y + +++
Sbjct: 540 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK-GMSPNTIIYSSIASALSREGRINKV 598
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D ++ + +Y+ +I+SLC + + A ++ M+ G P ++ L +
Sbjct: 599 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 658
Query: 301 LRDEGMEETA 310
L EG + A
Sbjct: 659 LASEGFVKEA 668
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G P ++ +++ C+ A V + + R D+ + ++L Q +
Sbjct: 185 MPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGS 244
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R++ G EPDVVSY ++ C AKR+ EL EM C P+ F T
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + Q + G P+ Y ++ C + A+ +++ M G
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y+ +L L A R EE + M K V T+ I+V FC N VD
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV-TFNILVDFFCQNGLVDRV 423
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + ++M G +P + Y+T+IN C E +D+A + M G +P
Sbjct: 424 IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 472
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 104/249 (41%), Gaps = 35/249 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + G ++ + +I+ CK ++ A + M P+ SYTI+L+G
Sbjct: 430 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 489
Query: 55 WGQQKNLLS--------MN---------------------EVYREMKDDGFEPDVVSYGI 85
W ++L+S +N E+ ++M +G PD++SY
Sbjct: 490 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 549
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ A + DEA+EL M P+ I+ ++ + L E R+++ +Q F +
Sbjct: 550 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 609
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+A YNAV+ + C A + M G PN TY I++ L G +EA
Sbjct: 610 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 669
Query: 206 SVFKRMSRK 214
+ + K
Sbjct: 670 EMLTELCSK 678
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 102/228 (44%), Gaps = 4/228 (1%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y M+ +C A + + A L A P+ + + ++ L + R+++AL +
Sbjct: 130 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+RG P P Y+ ++ A C A R+++++ G + ++VL+ + G +
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA + + + G EP V +Y V++ C + + +EM P + ++TL
Sbjct: 247 EALHLLRDLPSF-GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 305
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
I+ LC + + +M++ G P ++++ + + EG E A
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVA 353
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 35/168 (20%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI+ LCK VE+A E+ +M PD+ SY+ +++G G+ E+ M
Sbjct: 512 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 571
Query: 73 DDGFEP-----------------------------------DVVSYGIMINAHCSAKRYD 97
+ G P D V Y +I++ C +
Sbjct: 572 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 631
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
A+E M ++ C P+ + LI GL SE + EA + + +G
Sbjct: 632 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 168/341 (49%), Gaps = 17/341 (4%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+ G+ ++ +N +ID LCK++ V+RA++VF +M ++ P+ +Y +++G + + +
Sbjct: 218 EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVD 277
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
V+++M D G +P V+Y +I+ C A+ D A +F++M KP + T+I
Sbjct: 278 MAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTII 337
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL + + +A F Q +G +P+ TY ++ C + ++ A + +M G+
Sbjct: 338 DGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVK 397
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY+ ++H + G+ EE K MS EP V TY +++ C N + + A
Sbjct: 398 PNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD-LEPDVFTYGLLLDYLCKNGKCNEARS 456
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL----- 297
++D M +G+ P + +Y +++ + L + M+ GI P ++F+ +
Sbjct: 457 LFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYA 516
Query: 298 KQALRDE-----------GMEETAVVLAQKIDKLRKTPLVD 327
K+A+ DE G+ V ID L K VD
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVD 557
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 166/387 (42%), Gaps = 71/387 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M L+ ++ + L+D LCK+ A+ +FD M ++ P + Y I+L G+G++
Sbjct: 426 MSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGA 485
Query: 61 LLSMNE-----------------------------------VYREMKDDGFEPDVVSYGI 85
L M++ ++ +MK G P+VV+YG
Sbjct: 486 LSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545
Query: 86 MINAHCSAKRYDEAV-----------------------------------ELFREMEATN 110
+I+A C R D+AV ELF EM
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG 605
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
+P F T++ L E R+ EA + G +P+ +YN ++ +C++ R+++A
Sbjct: 606 IRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+++D M G+ PN +Y+ +LH KAGR + AY +F+ M RK G P V TY ++
Sbjct: 666 KLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK-GVTPGVETYNTILNG 724
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ + A ++ M L + YS +++ C + D+A K FQ + + ++
Sbjct: 725 LFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLD 784
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKI 317
F+ + L G +E A+ L I
Sbjct: 785 IITFNIMIDGLFKGGRKEDAMDLFAAI 811
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 152/312 (48%), Gaps = 9/312 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL-SMNEVYREM 71
++ +I C+ +E F + K + D LL+G K + +M+ + R+M
Sbjct: 87 YSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQM 146
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM---EATNCKPSPHIFCTLINGLGSE 128
+ G VVSY ++ C +R +EA EL M + ++C P + +ING +E
Sbjct: 147 PEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNE 206
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ +A F + G P+ TYN ++ C + ++ A + +M + G+ PN TY
Sbjct: 207 GQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTY 263
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ L KA + A VF++M K G +P+ TY ++ C VD A ++ +M
Sbjct: 264 NTIIDGLCKAQEVDMAEGVFQKMVDK-GVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGME 307
RGV P Y+T+I+ LC +D A FQ+M+D G++P ++ + L + + ++
Sbjct: 323 DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVD 382
Query: 308 ETAVVLAQKIDK 319
V Q IDK
Sbjct: 383 RAEGVFQQMIDK 394
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 141/285 (49%), Gaps = 7/285 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM---KKRRFDPDIKSYTILLEGWGQ 57
M + G + + +N L+ LC R E A+E+ M + PD+ SY I++ G+
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + ++ EM G PDVV+Y +I+ C A+ D A ++F++M KP+
Sbjct: 206 EGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVT 262
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+I+GL + + A F + +G +P TYN ++ C + ++ A + +M
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G+ P+ TY+ ++ L KA ++A VF++M K G +P TY I++ C V
Sbjct: 323 DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK-GVKPDNLTYTIIIDGLCKAQSV 381
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
D A ++ +M +GV P Y+ LI+ + ++ + +EM
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 156/343 (45%), Gaps = 16/343 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LID LCK V+ A F++M P+ + L+ G
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ EM + G PD+V + ++ C R EA L M KP + T
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNT 650
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G R+ EA++ G +P +YN ++ YC + RI++AY + EM + G
Sbjct: 651 LIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKG 710
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM--SRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ P TY+ +L+ L ++GR EA ++ M SRK ++ TY I++ FC N D
Sbjct: 711 VTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLW---SICTYSIILDGFCKNNCFD 767
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +I+ + + + + ++ +I+ L + +DA F + G+ P + +
Sbjct: 768 EAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIA 827
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP-----------LVDRGQ 330
+ L +EG E L ++K P L+DRG+
Sbjct: 828 ENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGE 870
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 157/358 (43%), Gaps = 36/358 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G+K + + +ID LCK++ V+RA+ VF +M + P+ +Y L+ G+ GQ + +
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419
Query: 62 LS-----------------------------MNE---VYREMKDDGFEPDVVSYGIMINA 89
+ NE ++ M G +P V YGIM++
Sbjct: 420 VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHG 479
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+ E +L M A P+ IF T+I + E + F + K++G P
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPN 539
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
TY ++ A C R++DA ++M G+ PN ++ +++ L + E+ +F
Sbjct: 540 VVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFL 599
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M + G P + + V+ C +V A R+ D M G+ P + Y+TLI+ C
Sbjct: 600 EMLNQ-GIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFA 658
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
++D+A K M+ G++P ++ L G + A L +++ + TP V+
Sbjct: 659 SRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVE 716
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 147/337 (43%), Gaps = 50/337 (14%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQK----NLLSMNEVYREMKD--DGFEPDVVS 82
A ++FD++ +++ LL + K + L+++ R ++D + PD +
Sbjct: 27 ALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCT 86
Query: 83 YGIMINAH-----------------------------------CSAKRYDEAVE-LFREM 106
Y I+I C KR EA+ L R+M
Sbjct: 87 YSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQM 146
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEA---LQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
C+ + TL+ GL +R EA L + P+ +YN V+ +
Sbjct: 147 PEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNE 206
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+++ AY + EM G+ P+ TY+ ++ L KA + A VF++M K G +P T
Sbjct: 207 GQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK-GVKPNNVT 262
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y ++ C +VDMA ++ +M +GV P Y+T+I+ LC +D A FQ+M+
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMI 322
Query: 284 DIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
D G++P ++ + L + + +++ V Q IDK
Sbjct: 323 DRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK 359
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 65/148 (43%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ ++D CK+ + A ++F + DI ++ I+++G + +++ +
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIP 812
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G P VV+Y ++ +E LF ME + P+ H+ LI L +
Sbjct: 813 ANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIP 872
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAY 160
A + + ++ F EA T + ++ +
Sbjct: 873 RAGAYLSKLDEKNFSLEASTTSMLISLF 900
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 155/319 (48%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL FN L+ CK ++ A +V D M + PD+ +Y +L+ G +
Sbjct: 273 MKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGK 332
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM++ PDVV+Y +IN + EL +ME KP+ +
Sbjct: 333 IDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNV 392
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ E ++ A + ++ GF P+ T+N ++ YC + R+++A+RMMDEM + G
Sbjct: 393 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKG 452
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N+ T + +LH L + ++AY + S++ VS +++ F V+ A
Sbjct: 453 LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVE-A 511
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M++WDEMK + ++P + Y+T+I LCH K D + E+L+ G+ P ++ +
Sbjct: 512 MKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILG 571
Query: 301 LRDEGMEETAVVLAQKIDK 319
EG E A K+ K
Sbjct: 572 YCREGQVEKAFQFHNKMVK 590
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 161/369 (43%), Gaps = 74/369 (20%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL-------------- 52
LPD +N LI LCK ++ A + D+M+ + PD+ +Y L+
Sbjct: 314 LPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFE 373
Query: 53 -----EGWGQQKNLLSMNEV----------------YREMKDDGFEPDVVSYGIMINAHC 91
EG G + N ++ N V R+M++ GF PD V++ +IN +C
Sbjct: 374 LIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYC 433
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF----- 146
A R EA + EM K + T+++ L E++L +A + + KRG+
Sbjct: 434 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEV 493
Query: 147 ------------------------------EPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
P TYN ++G C S + + + ++E+
Sbjct: 494 SYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNEL 553
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G+ P+ TY+ ++ + G+ E+A+ +M +K +P + T I++R C
Sbjct: 554 LESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKK-SFKPDLFTCNILLRGLCTEGM 612
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+D A+++++ ++G Y+T+I+ LC ED+ ++A EM + + P ++
Sbjct: 613 LDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNA 672
Query: 297 LKQALRDEG 305
+ AL D G
Sbjct: 673 ILSALADAG 681
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 135/291 (46%), Gaps = 4/291 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCK---SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M + LK L N LI+ L + V ++ +F + K + ++ IL+ G
Sbjct: 165 MKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCI 224
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ L + +MKD PD VSY +++ C + +EA +L +M+ P+ +
Sbjct: 225 ENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNT 284
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
F L++G L EA Q + P+ TYN ++G C +I++A+R+ DEM
Sbjct: 285 FNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEME 344
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ P+ TY+ +++ + + + + +M K G +P TY +VV+ + ++
Sbjct: 345 NLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGK-GVKPNAVTYNVVVKWYVKEGKM 403
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
D A +M+ G P ++TLIN C +L +A + EM G++
Sbjct: 404 DNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLK 454
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 134/324 (41%), Gaps = 24/324 (7%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK N ++ TLC R ++ A ++ KR + D SY L+ G+ +
Sbjct: 448 MSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGK 507
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EMK+ P +++Y MI C + + D++++ E+ + P + T
Sbjct: 508 SVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNT 567
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G E ++ +A QF + K+ F+P+ T N ++ C ++ A ++ + G
Sbjct: 568 IILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKG 627
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY+ ++ L K R EEA+ + M K P TY ++ ++ A
Sbjct: 628 KAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKK-LGPDCYTYNAILSALADAGRMKEA 686
Query: 241 MRIWDEMKARGVL-----------------------PVMHMYSTLINSLCHEDKLDDACK 277
+ +G L P +S IN LC + K DA
Sbjct: 687 EEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMH 746
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL 301
QE GI + +L + L
Sbjct: 747 MVQESTQKGITLHKSTYISLMEGL 770
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 132/286 (46%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + FN LI+ CK+ + A + D+M ++ + + +L ++
Sbjct: 413 MEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERK 472
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ G+ D VSYG +I + + EA++L+ EM+ PS + T
Sbjct: 473 LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNT 532
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL + +++ + + G P+ TYN ++ YC ++ A++ ++M K
Sbjct: 533 MIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKS 592
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T +I+L L G ++A +F K G TY ++ C + + A
Sbjct: 593 FKPDLFTCNILLRGLCTEGMLDKALKLFNTWISK-GKAIDAVTYNTIISGLCKEDRFEEA 651
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+ EM+ + + P + Y+ ++++L ++ +A ++ +++ G
Sbjct: 652 FDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQG 697
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 4/214 (1%)
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL---GSEKRLSEALQFFGQSKK 143
I A+ + R A ++F M+ + KP+ TLIN L S+ + + F K
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK 205
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
G + T+N ++ C ++++A ++ +M+ P+ +Y+ +L L K G+ E
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A + M + G P +T+ I+V +C + A ++ D M VLP + Y+ LI
Sbjct: 266 ARDLLLDM-KNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLI 324
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
LC + K+D+A + EM ++ + P ++ L
Sbjct: 325 GGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTL 358
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N +I C+ VE+A + +KM K+ F PD+ + ILL G + L
Sbjct: 557 GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKA 616
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ G D V+Y +I+ C R++EA +L EME P + + +++
Sbjct: 617 LKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSA 676
Query: 125 LGSEKRLSEALQFFGQSKKRG-----------------------FEPEAPTYNAVVGAYC 161
L R+ EA +F + ++G +P + T++ + C
Sbjct: 677 LADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELC 736
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ DA M+ E + GI + TY ++ LIK
Sbjct: 737 TQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIK 772
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 92/213 (43%), Gaps = 4/213 (1%)
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA---YCWSMRINDAYRMM 173
I T I + R A Q F + K+ +P T N ++ A Y + + +
Sbjct: 141 ILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIF 200
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
++ K G+ NT T++I+++ + EA + +M + P +Y ++ + C
Sbjct: 201 SDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKM-KDFSCFPDNVSYNTILDVLCK 259
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+++ A + +MK G+LP + ++ L++ C L +A + M + P
Sbjct: 260 KGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWT 319
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
++ L L +G + A L +++ L+ P V
Sbjct: 320 YNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDV 352
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 156/313 (49%), Gaps = 2/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ GL+ ++ +I LCK VF+KM ++ ++ YT L++ + N
Sbjct: 263 MDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGN 322
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ MK +G EPDVV+YG+++N C + R DEA+E + ++ +
Sbjct: 323 MGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSS 382
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GLG R+ EA + F + K+G P++ YNA++ A + ++A M G
Sbjct: 383 LIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEG 442
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TY I+++ L + + EEA ++ M K G PT + + + C + +V A
Sbjct: 443 CDQTVYTYTIMINGLFREHKNEEALKMWDMMIDK-GITPTAAAFRALSIGLCLSGKVARA 501
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ DE+ GV+P + ++N LC ++ +ACK +D G PG++ + L A
Sbjct: 502 CKLLDELAPMGVIPETA-FEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTVLINA 560
Query: 301 LRDEGMEETAVVL 313
LR G + A+ L
Sbjct: 561 LRKAGNADLALKL 573
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 143/314 (45%), Gaps = 1/314 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + N LI + VE V+ MK+ +P + +Y LL G + S
Sbjct: 127 GFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESA 186
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V M++ PDVV+Y MI +C + +A E FR+ME N P + TLI
Sbjct: 187 ERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQA 246
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+E L + + + G E Y+ V+G C + + Y + ++M + G N
Sbjct: 247 CYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVN 306
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ K G EA +F+RM +K G EP V TY +VV C + ++D AM
Sbjct: 307 VAIYTALIDSNAKCGNMGEAMLLFERM-KKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYL 365
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ + GV +YS+LI+ L ++ +A K F+EM+ G P ++ L AL
Sbjct: 366 EFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKC 425
Query: 305 GMEETAVVLAQKID 318
G + A+ ++++
Sbjct: 426 GKTDEALAFFKRME 439
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 169/395 (42%), Gaps = 73/395 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L +N L++ L S +E A+ V + M+ + PD+ +Y +++G+ Q
Sbjct: 158 MKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGK 217
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E +R+M+ PD ++Y +I A + +D + L+ EM+ + PH +
Sbjct: 218 TQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSL 277
Query: 121 LINGLGSEKR-----------------------------------LSEALQFFGQSKKRG 145
+I GL E + + EA+ F + KK G
Sbjct: 278 VIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEG 337
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAY----------------------------------- 170
EP+ TY VV C S R+++A
Sbjct: 338 LEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAE 397
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++ +EM K G P++ Y+ ++ L K G+T+EA + FKRM + G + TV TY I++
Sbjct: 398 KLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDE-GCDQTVYTYTIMING 456
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ + A+++WD M +G+ P + L LC K+ ACK E+ +G+ P
Sbjct: 457 LFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPE 516
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQK-IDKLRKTP 324
F ++ L G + A LA +D+ R+ P
Sbjct: 517 -TAFEDMLNVLCKAGRIKEACKLADGFVDRGREIP 550
>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
Length = 500
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 162/316 (51%), Gaps = 5/316 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLS 63
G+ ++ F LI CK+R VERA E+F +M K R PD Y +L++G+ ++ +
Sbjct: 41 GIHPDVVTFTALIRGFCKNRMVERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDR 100
Query: 64 MNEVYREMK-DDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE-MEATNCKPSPHIFCTL 121
E+ REM+ + +PDVV Y +++ C + R+ EA + E M C P+ + +L
Sbjct: 101 ALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSL 160
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I G K++ A+ + +R +P +Y+ ++ + R+ DAYR++ EM G
Sbjct: 161 IRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGC 220
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
N Y ++ L K+G ++AY++++ M R G P TY ++ FC N + + A+
Sbjct: 221 ELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRS-GAFPNQRTYATLIDTFCRNDRTETAL 279
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++D ++ L V MY+ +++ LC E +LDDA F+EM G+ ++ L
Sbjct: 280 GLFDHIRDYCPLDV-AMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGA 338
Query: 302 RDEGMEETAVVLAQKI 317
G E A + +++
Sbjct: 339 FRSGRSEEAFRILEEL 354
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 148/298 (49%), Gaps = 7/298 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + LI CK++ ++ A +++ M +R+ P I SY+++++G +
Sbjct: 145 MVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGR 204
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V REM+ G E +VV Y +I+ C + D+A L+R M+ + P+ + T
Sbjct: 205 VYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYAT 264
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEP-EAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI+ R AL F R + P + Y AVV C R++DA + EMR
Sbjct: 265 LIDTFCRNDRTETALGLFDH--IRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLA 322
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ +T Y+++LH ++GR+EEA+ + + + PG + TY V+ C ++
Sbjct: 323 GVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LES 378
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
M ++ EM+ RG+ P YS LI+ L ++ A +EML G+ PP + +
Sbjct: 379 GMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRV 436
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 134/278 (48%), Gaps = 4/278 (1%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P+ ++ L++ + L M D G PDVV++ +I C + + A E+
Sbjct: 9 PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68
Query: 103 FREMEATN-CKPSPHIFCTLINGLGSEKRLSEALQFFGQSK-KRGFEPEAPTYNAVVGAY 160
F+EM +N C+P ++ LI+G E R+ AL+ + + +R +P+ YN++V
Sbjct: 69 FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128
Query: 161 CWSMRINDAYRMMDE-MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
C S R +A++ +DE M + G P TY ++ KA + + A +++ M + +P
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERK-IQP 187
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
T+ +Y +++ +V A R+ EM+ G + +Y+TLI+ LC LDDA +
Sbjct: 188 TIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALY 247
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ M G P + ++ L ETA+ L I
Sbjct: 248 RIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI 285
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 2/210 (0%)
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ H F +LI+ L RL +A + G P+ T+ A++ +C + + A+ +
Sbjct: 9 PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68
Query: 173 MDEMRKCG-IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
EM K P+ Y +++ K R + A + + M + +P V Y +V
Sbjct: 69 FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128
Query: 232 CYNAQVDMAMRIWDEMKAR-GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C + + A + DE R G P + Y++LI C K+ A + ML+ I+P
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+S + L G A + ++++ L
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVREMETL 218
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 147/288 (51%), Gaps = 5/288 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ +G + +L F L+ +LC+ +HVE A+ +F + KK F P IKS+ I+L GW + +L
Sbjct: 210 NDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVKGSL 268
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
V+ E+ +PD+ +YG INA A + AV+LF M P I +
Sbjct: 269 PDAKRVWNEIIASKLKPDLFTYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCI 328
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ L +K++ EAL+ FG+ RG + + TYN ++ +C R Y ++D+M K G
Sbjct: 329 IDQLCFKKKIPEALKIFGEMNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGC 388
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY +L + + ++ +RM + G + TY +++ ++
Sbjct: 389 SPNNMTYTYILK---TTEKPRDVMNLIQRME-ESGCKLDSDTYNLILNLYVSMKYEKGVQ 444
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++W+EM+ G P ++ +++ L + +LD A +Y+ M G+ P
Sbjct: 445 QVWEEMERNGSGPDQRSFTIMVHGLHSQGQLDQALQYYTTMKSRGMTP 492
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 115/252 (45%), Gaps = 4/252 (1%)
Query: 46 KSYTILLEGWGQQKNLLSMNEVYREMKDD--GFEPDVVSYGIMINAHCSAKRYDEAVELF 103
++Y +L+ G+ K + M +++ E+ + G + +++N + A + EA+E+F
Sbjct: 147 RTYIEMLDILGRMKKVRLMRQLFDEIPEQRRGLVVTNRMFAVLLNRYAGAHKVQEAIEIF 206
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
+ + F L+ L K + EA F Q KK F P ++N ++ +C
Sbjct: 207 YKRNDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVK 265
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ DA R+ +E+ + P+ TY ++ L KAG+ A +F M K G P V+
Sbjct: 266 GSLPDAKRVWNEIIASKLKPDLFTYGTFINALTKAGKLSTAVKLFTSMWEK-GINPDVAI 324
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++ C+ ++ A++I+ EM RG + Y+TLI C + + + +M
Sbjct: 325 CNCIIDQLCFKKKIPEALKIFGEMNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDME 384
Query: 284 DIGIRPPGQLFS 295
G P ++
Sbjct: 385 KKGCSPNNMTYT 396
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 3/152 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + ++ +N LI CK R E+ E+ D M+K+ P+ +YT +L+ + ++
Sbjct: 348 MNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKPRD 407
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ MN + R M++ G + D +Y +++N + S K +++ EME P F
Sbjct: 408 V--MNLIQR-MEESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTI 464
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+++GL S+ +L +ALQ++ K RG PE T
Sbjct: 465 MVHGLHSQGQLDQALQYYTTMKSRGMTPEPRT 496
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 171 RMMDEM--RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
++ DE+ ++ G+ R + ++L+ A + +EA +F + + G E + ++I++
Sbjct: 167 QLFDEIPEQRRGLVVTNRMFAVLLNRYAGAHKVQEAIEIFYKRNDY-GFEVDLVGFQILL 225
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C V+ A ++ + K PV+ ++ ++N C + L DA + + E++ ++
Sbjct: 226 MSLCRYKHVEEAEALFLQKKDE-FPPVIKSWNIILNGWCVKGSLPDAKRVWNEIIASKLK 284
Query: 289 PPGQLFSNLKQALRDEGMEETAVVL 313
P + AL G TAV L
Sbjct: 285 PDLFTYGTFINALTKAGKLSTAVKL 309
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 150/285 (52%), Gaps = 7/285 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G+ +L + LI+ C H+ A VF + KR + P+ + L++G G+ K
Sbjct: 91 GITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRA 150
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L ++ ++ GF+ D VSYG +IN C A L R++E + KP ++ T+
Sbjct: 151 LHFHD---KVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTI 207
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ L K L +A + + +G P TY ++ +C + +A+ +++EM+ I
Sbjct: 208 IHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNI 267
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ T++I++ L K G+ +EA S+F+ M K P + TY ++ C N ++ A+
Sbjct: 268 NPDVYTFNILIDALAKEGKIDEAMSLFEEMKHK-NMFPNIVTYTSLIDGLCKNHHLERAI 326
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+ +MK +G+ P ++ Y+ L+++LC +L++A ++FQ +L G
Sbjct: 327 ALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKG 371
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 1/283 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + LI+ LCK+ + + K++ PD+ YT ++ + K L
Sbjct: 161 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDA 220
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y EM G P+V +Y +I+ C EA L EM+ N P + F LI+
Sbjct: 221 CDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDA 280
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ EA+ F + K + P TY +++ C + + A + +M++ GI PN
Sbjct: 281 LAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPN 340
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+L L K GR E A F+ + K G V TY +++ C M +
Sbjct: 341 VYSYTILLDALCKGGRLENAKQFFQHLLVK-GYHLNVRTYNVMINGLCKAGLFGDVMDLK 399
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+M+ +G +P + T+I +L +D+ D A K+ +EM+ G+
Sbjct: 400 SKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 1/292 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N LI LC ++RA DK+ + F D SY L+ G + ++ + R+++
Sbjct: 134 LNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLE 193
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+PD+V Y +I+ C K +A +L+ EM P+ + TLI+G L
Sbjct: 194 GHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLK 253
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + K + P+ T+N ++ A +I++A + +EM+ + PN TY ++
Sbjct: 254 EAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLI 313
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K E A ++ K+M ++ G +P V +Y I++ C +++ A + + + +G
Sbjct: 314 DGLCKNHHLERAIALCKKM-KEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGY 372
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ Y+ +IN LC D +M G P F + AL ++
Sbjct: 373 HLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEK 424
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 128/255 (50%), Gaps = 1/255 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++ +K +L + +I LCK++ + A +++ +M + P++ +YT L+ G+ N
Sbjct: 192 LEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGN 251
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EMK PDV ++ I+I+A + DEA+ LF EM+ N P+ + +
Sbjct: 252 LKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTS 311
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L A+ + K++G +P +Y ++ A C R+ +A + + G
Sbjct: 312 LIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKG 371
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N RTY+++++ L KAG + + +M K G P T++ ++ + D A
Sbjct: 372 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGK-GCMPNAITFKTIICALLEKDENDKA 430
Query: 241 MRIWDEMKARGVLPV 255
+ EM ARG+L V
Sbjct: 431 EKFLREMIARGLLKV 445
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 133/298 (44%), Gaps = 1/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN ++ +L K++ +F + + PD+ + +IL+ + ++ V+ +
Sbjct: 64 FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANIL 123
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G+ P+ ++ +I C A+ ++ A + + TLINGL
Sbjct: 124 KRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 183
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + + +P+ Y ++ C + + DA + EM GI PN TY ++
Sbjct: 184 AVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLI 243
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H G +EA+S+ M K P V T+ I++ ++D AM +++EMK + +
Sbjct: 244 HGFCIMGNLKEAFSLLNEMKLK-NINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNM 302
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P + Y++LI+ LC L+ A ++M + GI+P ++ L AL G E A
Sbjct: 303 FPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENA 360
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 129/289 (44%), Gaps = 1/289 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A F++M R P + +L + K ++ ++++ + +G PD+ + I+IN
Sbjct: 45 AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C A +F + P+ TLI GL + AL F + +GF+
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL 164
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ +Y ++ C + R++ ++ + P+ Y ++H L K +A ++
Sbjct: 165 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLY 224
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K G P V TY ++ FC + A + +EMK + + P ++ ++ LI++L
Sbjct: 225 SEMIVK-GISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
E K+D+A F+EM + P +++L L E A+ L +K+
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKM 332
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 1/192 (0%)
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+AV F M P +F +++ L KR + F Q + G P+ T + ++
Sbjct: 44 DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+C I A+ + + K G PN T + ++ L G + A ++ + G
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQ-GF 162
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+ +Y ++ C + R+ +++ V P + MY+T+I+ LC L DAC
Sbjct: 163 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACD 222
Query: 278 YFQEMLDIGIRP 289
+ EM+ GI P
Sbjct: 223 LYSEMIVKGISP 234
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 150/302 (49%), Gaps = 1/302 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ +F++L+ + KS++ + +F M+ D+ +Y I++ + + V
Sbjct: 68 SIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVV 127
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPDVV+ +IN C R AV+L +ME CK I+ T+I+G
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKT 187
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ AL FG+ ++ G + TYN++V C S R +DA R+M +M I PN T+
Sbjct: 188 GLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITF 247
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+++ ++ G+ EA ++ M R+ +P V TY ++ C + QVD A +I D M
Sbjct: 248 TALINAFVREGKFLEAKKFYEEMIRRC-IDPDVFTYNSMIHGLCMHGQVDEAKQILDLMV 306
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+G P + Y+TLIN C ++D+ K +EM G+ F+ + Q G +
Sbjct: 307 TKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPD 366
Query: 309 TA 310
A
Sbjct: 367 AA 368
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 158/325 (48%), Gaps = 4/325 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ K ++ +N +ID CK+ V A +F +M++ D +Y L+ G
Sbjct: 165 MEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGR 224
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R+M P+V+++ +INA ++ EA + + EM P + +
Sbjct: 225 RSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNS 284
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL ++ EA Q +G P+ TYN ++ +C + R+++ +++ EM + G
Sbjct: 285 MIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRG 344
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ +T T++ ++ +AGR + A +F RM G+ P + TY I++ CYN +V+ A
Sbjct: 345 LVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM----GSRPNIRTYSILLYGLCYNWRVEKA 400
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +++ M+ + + Y+ +I+ +C ++DA F + G+ P ++ +
Sbjct: 401 LVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISG 460
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPL 325
+ + + A L +K+ + PL
Sbjct: 461 FCRKRLWDKADFLYRKMQEDGLLPL 485
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 4/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ +L +N +I+ LC+ A V KM K ++PD+ + + L+ G+ Q
Sbjct: 95 MEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR 154
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M++ + DVV Y +I+ C + A+ LF ME + + +
Sbjct: 155 VFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNS 214
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL R S+A + R P T+ A++ A+ + +A + +EM +
Sbjct: 215 LVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRC 274
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ ++H L G+ +EA + M K G P V TY ++ FC +VD
Sbjct: 275 IDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTK-GCFPDVVTYNTLINGFCKTKRVDEG 333
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM RG++ ++T+I + D A + F M G RP + +S L
Sbjct: 334 TKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYG 390
Query: 301 LRDEGMEETAVVLAQKIDK 319
L E A+VL + + K
Sbjct: 391 LCYNWRVEKALVLFESMQK 409
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 146/288 (50%), Gaps = 2/288 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +N LI LC + A V KM++ P++ +Y L++G+ + +
Sbjct: 345 MAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGD 404
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ +E++ +M +G P+VV Y M+N C + + +A L +M NC P+ F T
Sbjct: 405 LVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNT 464
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I GL R+ A+ F Q ++ G P TYN V+ RI +A ++ EM + G
Sbjct: 465 FIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKG 524
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N TY+ + G+ EEA + +M G +P TY + +C +V A
Sbjct: 525 MELNLVTYNTIFGGFCNVGKFEEALKLLGKM-LVGGVKPDAITYNTLTYAYCMQGKVKTA 583
Query: 241 MRIWDEMKARG-VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+++ D++ A G +P + Y++L+ +C++ +++A Y +ML+ GI
Sbjct: 584 IQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGI 631
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 159/316 (50%), Gaps = 4/316 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ +I +L +VE A V+ KM R P++ ++T L++G+ + +L
Sbjct: 279 GIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEA 338
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M ++GFEP+VV+Y +I+ CS + EAV + +ME C P+ + LI+G
Sbjct: 339 LNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDG 398
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A + + + G P Y ++V C S + A+ ++++M PN
Sbjct: 399 FAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPN 458
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T T++ + L +GR E A ++F +M + G P + TY V+ ++ A+ +
Sbjct: 459 TVTFNTFIKGLCCSGRVECAINLFCQMEQY-GCSPNIKTYNEVLDGLLKENRIKEALELV 517
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM+ +G+ + Y+T+ C+ K ++A K +ML G++P ++ L A +
Sbjct: 518 TEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQ 577
Query: 305 GMEETAVVLAQKIDKL 320
G +TA+ Q +DKL
Sbjct: 578 GKVKTAI---QLLDKL 590
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 6/293 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F +I+T + E+A ++F ++++ P +K Y LL+ + + +Y MK
Sbjct: 117 FINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMK 176
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG EP+V +Y I++ A C R D A +L EM C+P + T+I+ + ++
Sbjct: 177 RDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVE 236
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + F+P YNA++ +C ++ + + ++ +M + GI PN TY V+
Sbjct: 237 EARELSIR-----FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVI 291
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L G E A +V+ +M + G P V T+ +++ + +V A+ IW+ M G
Sbjct: 292 SSLSGIGNVELALAVWAKMFVR-GCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGF 350
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + Y+TLI+ LC K+ +A +M G P + L G
Sbjct: 351 EPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAG 403
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 156/357 (43%), Gaps = 41/357 (11%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FG + + +N L+D + + + ++ MK+ +P++ +Y ILL+ + +
Sbjct: 142 EFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVD 201
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ EM + G EPDVVSY +I++ + +EA EL + +P+ ++ LI
Sbjct: 202 GACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNALI 256
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA----------------------- 159
NG E ++ E GQ ++G +P TY+ V+ +
Sbjct: 257 NGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCS 316
Query: 160 ------------YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
Y R+ +A + + M + G PN Y+ ++H L G+ EA SV
Sbjct: 317 PNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSV 376
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+M R G P VSTY ++ F + A IW++M G +P + +Y++++N LC
Sbjct: 377 SSKMERN-GCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLC 435
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
A ++M P F+ + L G E A+ L ++++ +P
Sbjct: 436 RSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSP 492
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 148/319 (46%), Gaps = 6/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + ++ + +I ++ K VE A+E+ RF P++ Y L+ G+ ++
Sbjct: 210 MSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNALINGFCREYK 264
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +M + G +P+V++Y +I++ + A+ ++ +M C P+ + F +
Sbjct: 265 VKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTS 324
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ G R+ EAL + + + GFEP YN ++ C ++ +A + +M + G
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNG 384
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ KAG A ++ +M G P V Y +V + C ++ A
Sbjct: 385 CSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTN-GCIPNVVVYTSMVNVLCRSSMFSQA 443
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++M P ++T I LC +++ A F +M G P + ++ +
Sbjct: 444 WSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDG 503
Query: 301 LRDEGMEETAVVLAQKIDK 319
L E + A+ L ++++
Sbjct: 504 LLKENRIKEALELVTEMEE 522
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 126/264 (47%), Gaps = 6/264 (2%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
+ F +Y I++E G++ ++ + + ++MK +G + +IN +
Sbjct: 71 NSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLA 130
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
++A+++F + C+P+ I+ L++ + SE R + K+ G EP TYN +
Sbjct: 131 EQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNIL 190
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ A C + R++ A +++ EM G P+ +Y V+ + K G+ EEA + R
Sbjct: 191 LKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF----- 245
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+P VS Y ++ FC +V + +M +G+ P + YST+I+SL ++ A
Sbjct: 246 -QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M G P F++L +
Sbjct: 305 AVWAKMFVRGCSPNVYTFTSLMKG 328
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN I LC S VE A +F +M++ P+IK+Y +L+G ++ + E+ EM+
Sbjct: 462 FNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEME 521
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G E ++V+Y + C+ +++EA++L +M KP + TL + ++
Sbjct: 522 EKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVK 581
Query: 133 EALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A+Q + G + PE Y +++ C + + +A +D+M GI N T++ +
Sbjct: 582 TAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNAL 641
Query: 192 LHHLIKA 198
+ L +
Sbjct: 642 VRGLFNS 648
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 7/251 (2%)
Query: 68 YREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+R + + F+ ++Y IMI D L ++M+ S +F +IN
Sbjct: 66 FRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYR 125
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+AL+ F + ++ G +P YN ++ A R + M++ G PN
Sbjct: 126 RVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVY 185
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+I+L L K R + A + MS K G EP V +Y V+ +V+ A E
Sbjct: 186 TYNILLKALCKNNRVDGACKLLVEMSNK-GCEPDVVSYTTVISSMSKLGKVEEA----RE 240
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
+ R P + +Y+ LIN C E K+ + +M++ GI P +S + +L G
Sbjct: 241 LSIR-FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGN 299
Query: 307 EETAVVLAQKI 317
E A+ + K+
Sbjct: 300 VELALAVWAKM 310
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 163/326 (50%), Gaps = 11/326 (3%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ Q+LP FN L+D L KSRH +A + + +RRF PD+ +Y L +GW + K+
Sbjct: 166 VAQDLPLFNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLADGWCRVKDTSRAL 224
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-----TNCKPSPHIFCT 120
++ R+M + G P +Y +++ A + A F +M+ NCKP + T
Sbjct: 225 DLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTT 284
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GLG +L +A + F + K G P TYNA++ C + DA + D+M +
Sbjct: 285 IIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKD 344
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY +++ L G+ + A + +RM + G EP V TY +++R ++D A
Sbjct: 345 YIPNVVTYTVLIRGLCHVGKIDRAMKLMERM-KNEGCEPVVQTYNVLIRYSFEEGEMDKA 403
Query: 241 MRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFSN 296
+ +++ M K LP Y+ +I+++ + +D A + EM++ G P + +
Sbjct: 404 LHLFERMSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEMVERGYLPRRFMLNR 463
Query: 297 LKQALRDEGMEETAVVLAQKIDKLRK 322
+ L G ++ + L + +K R+
Sbjct: 464 VLNGLMLTGNQQLSRDLLRMQEKYRR 489
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 91 CSAKRYDEAVELFREMEATN-CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
S +R D AV LF + ++ +F +L++ LG + S+A ++ +R F P+
Sbjct: 145 ASQRRPDIAVRLFLSLHRSHRVAQDLPLFNSLLDALGKSRHASKAASLV-RALERRFPPD 203
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRK---CGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
TYN + +C R+ D R +D +R+ GI P TY+++L +AG+ + A++
Sbjct: 204 VVTYNTLADGWC---RVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWN 260
Query: 207 VF----KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
F KR S+ +P V +Y ++ Q+D A +++DEM G P + Y+ L
Sbjct: 261 FFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNAL 320
Query: 263 INSLCHEDKLDDACKYFQEML 283
I +C + ++DA F +M+
Sbjct: 321 IQVICKKGNVEDAVTVFDDMI 341
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N LI +CK +VE A VFD M ++ + P++ +YT+L+ G
Sbjct: 305 MSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGK 364
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
+ ++ MK++G EP V +Y ++I D+A+ LF M + C P+ +
Sbjct: 365 IDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYN 424
Query: 120 TLINGLGSEKR---LSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+I+ + KR ++ A + + +RG+ P N V+
Sbjct: 425 IVISAMFVRKRAEDMAIAARMVMEMVERGYLPRRFMLNRVLNG 467
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 168/326 (51%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +FG + + LID CK +E+A+++F +M K + ++YT+L+ G +
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y +M++DG P++ +Y ++N C R +A ++F EM + + T
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL E +L+EA + Q K G P TYN ++ +C ++ A + +++ G
Sbjct: 309 LIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+I++ + G T A + K M + G +P+ TY I++ F + ++ A
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER-GIKPSKVTYTILIDTFARSDNMEKA 427
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M+ G++P +H YS LI+ C + ++++A + F+ M++ P +++ +
Sbjct: 428 IQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
EG A+ L +++++ P V
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNV 513
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 153/303 (50%), Gaps = 1/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ L +N +++ LCK + A +VFD+M++R +I +Y L+ G ++
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N+V +MK DG P++++Y +I+ C + +A+ L R++++ PS +
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + S A + + ++RG +P TY ++ + S + A ++ M + G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +++H G+ EA +FK M K EP Y ++ +C A
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK-NCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ EM+ + + P + Y +I LC E K +A + ++M+D GI P + S + +A
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRA 557
Query: 301 LRD 303
D
Sbjct: 558 KND 560
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 155/309 (50%), Gaps = 2/309 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
F LI C++ +E++ ++ ++ + F P++ YT L++G ++ + +++ EM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G + +Y ++IN + E++ +M+ P+ + + ++N L + R
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A Q F + ++RG TYN ++G C M++N+A +++D+M+ GI PN TY+ +
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ G+ +A S+ + + + G P++ TY I+V FC A ++ EM+ RG
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSR-GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETA 310
+ P Y+ LI++ D ++ A + M ++G+ P +S L +G M E +
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 311 VVLAQKIDK 319
+ ++K
Sbjct: 464 RLFKSMVEK 472
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 148/312 (47%), Gaps = 2/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ + S + F++ K + D+ S+ IL++G + + ++ E+
Sbjct: 132 FNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELT 190
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF P+VV Y +I+ C ++A +LF EM + + LINGL
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK 250
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + + + ++ G P TYN V+ C R DA+++ DEMR+ G+ N TY+ ++
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + + EA V +M + G P + TY ++ FC ++ A+ + ++K+RG+
Sbjct: 311 GGLCREMKLNEANKVVDQM-KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ L++ C + A K +EM + GI+P ++ L E A+
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 313 LAQKIDKLRKTP 324
L +++L P
Sbjct: 430 LRLSMEELGLVP 441
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 142/321 (44%), Gaps = 42/321 (13%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEP----------------------------- 78
Y +++ + Q ++L + EM D+GF P
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 79 -----DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
DV S+GI+I C A +++ +L E+ P+ I+ TLI+G + + +
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A F + K G TY ++ + + M ++M++ G+ PN TY+ V++
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K GRT++A+ VF M R+ G + TY ++ C +++ A ++ D+MK+ G+
Sbjct: 277 QLCKDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y+TLI+ C KL A +++ G+ P ++ L +G A +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 314 AQKID-------KLRKTPLVD 327
++++ K+ T L+D
Sbjct: 396 VKEMEERGIKPSKVTYTILID 416
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 163/318 (51%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + FN L+ L A++VFDKM + + PD++SYT L+ W +N
Sbjct: 286 MRKNGFDDGVESFNCLLVALANEGLGREARQVFDKMLGQ-YSPDLRSYTALMLAWCNARN 344
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ V+ EM + G +PDVV + MI +R EAV++F M+A P+ +
Sbjct: 345 LVEAGRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTM 404
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++ A++ F + ++ +P+ TY ++ Y + R++ +++EM + G
Sbjct: 405 LICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKG 464
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR-MFCYNAQVDM 239
P+ RTY+ ++ L ++A ++K+M +K G +PT+ TY ++++ F + M
Sbjct: 465 CPPDARTYNALIKLLTNRKMPDDAARIYKKMIKK-GLDPTIHTYNMMMKSYFLGDRNYAM 523
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+W+EM RG+ P ++ Y+ I+ + ++A KY +EM++ G++ P +
Sbjct: 524 GCAVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCNKFAA 583
Query: 300 ALRDEGMEETAVVLAQKI 317
L G + LAQK+
Sbjct: 584 DLSKAGKLDMLYELAQKV 601
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 141/313 (45%), Gaps = 5/313 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
++ L + +H R F + F +Y +L G+ + SM + +EM
Sbjct: 195 VLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLLILGKTRQFESMVALLQEMGK 254
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G + ++ + I + +A AV +F M F L+ L +E E
Sbjct: 255 AG-TLSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALANEGLGRE 313
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A Q F + + + P+ +Y A++ A+C + + +A R+ +EM + G+ P+ ++ ++
Sbjct: 314 ARQVFDKMLGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIE 372
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L++ R EA +F+ M K G P V TY +++ C ++DMAM ++EM+
Sbjct: 373 GLLRGQRQHEAVKMFELMKAK-GPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQ 431
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y+ L+ + ++D +EM G P + ++ L + L + M + A +
Sbjct: 432 PDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARI 491
Query: 314 AQKIDKLRKTPLV 326
+K+ K P +
Sbjct: 492 YKKMIKKGLDPTI 504
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K +K E +N LI C ++ A D+M +R + +Y +L+
Sbjct: 208 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 267
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM G PDV +Y I+IN HC +A+E+F M + + +
Sbjct: 268 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 327
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + ++ E + F ++ +RG P+ YNA++ ++ S I+ A+ +M EM K
Sbjct: 328 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 387
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ ++ L GR +EA + M+ + G +P + TY ++ + V A
Sbjct: 388 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER-GIQPDLVTYNTLISGYSMKGDVKDA 446
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+RI +EM +G P + Y+ LI LC + DDA +EM++ GI P + +L +
Sbjct: 447 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 506
Query: 301 LRDE 304
L E
Sbjct: 507 LTTE 510
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 3/272 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+ L A E+ ++M + PD+ +Y IL+ G ++ N+
Sbjct: 247 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 306
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G VV+Y +I A + E +LF E +P ++ LIN
Sbjct: 307 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 366
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + A + G+ +K+ P+ TYN ++ C R+++A +++DEM + GI P+
Sbjct: 367 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 426
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ G ++A + M K G PT+ TY +++ C N Q D A +
Sbjct: 427 LVTYNTLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMV 485
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK--LDD 274
EM G+ P Y +LI L ED+ +DD
Sbjct: 486 KEMVENGITPDDSTYISLIEGLTTEDERAIDD 517
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 9/224 (4%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y MK S +++A SA + ++FR + C + F ++ L
Sbjct: 70 LYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFR-LRLPLCTTT---FNIMLRHLC 125
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGIGPNT 185
S + + AL+ Q + P A TYN V+ +C R+ A +M EMR + GI PN
Sbjct: 126 SAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 181
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY V+ K GR +EA VF M K +P Y ++ +C ++D A+ D
Sbjct: 182 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 241
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M RGV + Y+ L+++L + + +A + +EM G+ P
Sbjct: 242 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 285
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 156/318 (49%), Gaps = 4/318 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KF + + LI H + +F +M++ ++P + +T L+ G+ ++
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S + EMK + D+V Y + I++ + D A + F E+EA KP + +
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L RL EA++ F +K P YN ++ Y + + ++AY +++ R G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y+ +L L K G+ +EA VF+ M K P +STY I++ M C ++D A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL-FSNLKQ 299
+ D M+ G+ P + + +++ LC KLD+AC F+EM D + P ++ F +L
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLID 455
Query: 300 ALRDEGMEETAVVLAQKI 317
L G + A + +K+
Sbjct: 456 GLGKVGRVDDAYKVYEKM 473
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 162/347 (46%), Gaps = 37/347 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ L K V+ A +VF++MKK P++ +Y IL++ + L + E+ M+
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V + IM++ C +++ DEA +F EM+ C P FC+LI+GLG R+
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM-------------------M 173
+A + + + + Y +++ + R D +++ M
Sbjct: 465 DAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYM 524
Query: 174 DEMRKCG----------------IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
D M K G P+ R+Y I++H LIKAG E Y +F M ++ G
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM-KEQGC 583
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
Y IV+ FC +V+ A ++ +EMK +G P + Y ++I+ L D+LD+A
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+E I ++S+L G + A ++ +++ + TP
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 161/324 (49%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + N ++D LCKS+ ++ A +F++M + PD ++ L++G G+
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +VY +M D + + Y +I + R ++ +++++M NC P + T
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNT 522
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + + F + K R F P+A +Y+ ++ + N+ Y + M++ G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+TR Y+IV+ K G+ +AY + + M K G EPTV TY V+ ++D A
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++E K++ + + +YS+LI+ ++D+A +E++ G+ P +++L A
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L A+V Q + +L+ TP
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTP 725
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ LI L K+ E+F MK++ D ++Y I+++G+ + + +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EMK GFEP VV+YG +I+ R DEA LF E ++ + + I+ +LI+G G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA + ++G P T+N+++ A + IN+A M++ PN
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I+++ L K + +A+ ++ M +K G +P+ +Y ++ + A ++D
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEG 305
KA G +P Y+ +I L + ++ DA F+E G+ + L L +++
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDC 847
Query: 306 MEETAVVLA 314
+E+ A+V A
Sbjct: 848 LEQAAIVGA 856
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 108/210 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + +ID L K ++ A +F++ K +R + ++ Y+ L++G+G+ +
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ E+ G P++ ++ +++A A+ +EA+ F+ M+ C P+ + LING
Sbjct: 677 YLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ ++A F+ + +K+G +P +Y ++ + I +A + D + G P+
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+ Y+ ++ L R +A+S+F+ R+
Sbjct: 797 SACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL L +N L+D L K+ + A F MK+ + P+ +Y IL+ G + +
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++EM+ G +P +SY MI+ A EA LF +A P + +I G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
L + R +A F ++++RG P +N ++ ND
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGL----PIHNKTCVVLLDTLHKND 846
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 154/314 (49%), Gaps = 3/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L C++ +V A E+ KM+K R P+ + ++ G + + E +RE +
Sbjct: 249 YNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKR 308
Query: 73 DDGFEP--DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
E + V+Y ++ A A+ELF EM P ++ T+I+GL R
Sbjct: 309 TVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGR 368
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L +A KK GF+ +A YN ++G +C R+N+AY ++ EM++ G+ P+ TY+
Sbjct: 369 LDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNT 428
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L L KAG + +M G P+V T+ ++ +C Q+D A+RI+ M
Sbjct: 429 LLSGLCKAGDFLAVDELLGKMIDG-GCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDES 487
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G+ P +Y+TLI+ LC A + F EM + + F+ L + LRD+ M E A
Sbjct: 488 GIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKA 547
Query: 311 VVLAQKIDKLRKTP 324
L + + R TP
Sbjct: 548 FELMDLMREGRCTP 561
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 5/271 (1%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
S + A+ + D + PD ++ LL+ Q +L M +++ M+D P+VV+
Sbjct: 115 SSSADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVT 174
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQ 140
YGI++ C A R +A+ + M P + +++GL RL +A++F +
Sbjct: 175 YGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEE 234
Query: 141 SKK--RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+ G P TYN + A+C + + A ++ +M K + PN T + ++ L
Sbjct: 235 RMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWV 294
Query: 199 GRTEEAYSVFK-RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
GR A F+ + + P TY +V F + V +AM ++ EM G P
Sbjct: 295 GRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAI 354
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
MY T+I+ L +LDDA M G +
Sbjct: 355 MYFTMISGLTQAGRLDDAWSMATSMKKAGFQ 385
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 155/364 (42%), Gaps = 49/364 (13%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW--- 55
D PD FN L+D L ++ + ++F M+ P++ +Y IL++G
Sbjct: 126 DSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKA 185
Query: 56 GQQKNLLSMNEVYREMKDD------------------------------------GFEPD 79
G+ + LS+ + + D G P+
Sbjct: 186 GRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPN 245
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
V+Y + +A C A A EL +ME P+ T++ GL R+ AL+FF
Sbjct: 246 TVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFF- 304
Query: 140 QSKKRGFEPE----APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+KR PE A TY+ +VGA+ + + A + EM G P+ Y ++ L
Sbjct: 305 -REKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGL 363
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+AGR ++A+S+ M +K G + Y I++ FC +++ A + EMK G+ P
Sbjct: 364 TQAGRLDDAWSMATSM-KKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPD 422
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
++ Y+TL++ LC + +M+D G RP F L G + A+ + +
Sbjct: 423 VYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFR 482
Query: 316 KIDK 319
+D+
Sbjct: 483 SMDE 486
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 107/202 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + +N LI C+ + + A E+ +MK+ PD+ +Y LL G + +
Sbjct: 379 MKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGD 438
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+++E+ +M D G P VV++G +I+ +C + DEA+ +FR M+ + +P+ I+ T
Sbjct: 439 FLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNT 498
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + S A++ F + +++ T+NA++ A+ +MD MR+
Sbjct: 499 LIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGR 558
Query: 181 IGPNTRTYDIVLHHLIKAGRTE 202
P+ T DI++ L G T+
Sbjct: 559 CTPDYVTIDILMEWLPVIGETD 580
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 1/223 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+I L ++ ++ A + MKK F D K+Y IL+ G+ ++K L E+ EMK+ G
Sbjct: 359 MISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAG 418
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PDV +Y +++ C A + EL +M C+PS F TLI+G ++ EAL
Sbjct: 419 LQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEAL 478
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + G +P YN ++ C S + A + DEMR+ + N T++ +L L
Sbjct: 479 RIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGL 538
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
E+A+ + M R+ P T +I++ + D
Sbjct: 539 RDKNMPEKAFELMDLM-REGRCTPDYVTIDILMEWLPVIGETD 580
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 150/281 (53%), Gaps = 7/281 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++ +CKS A E+ KM++R+ D Y+I+++G + +L + ++ EM+
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF+ D++ Y +I C A R+D+ +L R+M P F LI+ E +L
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + +RG P+ TY +++ +C +++ A M+D M G GPN RT++I++
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KA ++ +F++MS + TV TY +++ FC ++++A ++ EM +R V
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDIGI 287
P + Y L++ LC + + A + F+++ LDIGI
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 153/322 (47%), Gaps = 1/322 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + + F+ LI+ LC V A E+ D+M + P + + L+ G +
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ M + GF+P+ V+YG ++ C + + A+EL R+ME K + +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL + L A F + + +GF+ + Y ++ +C++ R +D +++ +M K I
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ + ++ +K G+ EA + K M ++ G P TY ++ FC Q+D A
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D M ++G P + ++ LIN C + +DD + F++M G+ ++ L Q
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
+ G E A L Q++ R P
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRP 455
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 154/319 (48%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G K ++ + LI C + + ++ M KR+ PD+ +++ L++ + ++
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+++EM G PD V+Y +I+ C + D+A + M + C P+ F
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING + + L+ F + RG + TYN ++ +C ++ A + EM
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y I+L L G E+A +F+++ K E + Y I++ C ++VD A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I LC + L +A F++M + G P G ++ L +A
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 301 LRDEGMEETAVVLAQKIDK 319
EG + L ++I +
Sbjct: 572 HLGEGDATKSAKLIEEIKR 590
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 150/319 (47%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K L N L++ LC + V A + D+M + F P+ +Y +L+ +
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ R+M++ + D V Y I+I+ C D A LF EME K I+ T
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G R + + KR P+ ++A++ + ++ +A + EM + G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T TY ++ K + ++A + M K G P + T+ I++ +C +D
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNILINGYCKANLIDDG 406
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ +M RGV+ Y+TLI C KL+ A + FQEM+ +RP + L
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 301 LRDEGMEETAVVLAQKIDK 319
L D G E A+ + +KI+K
Sbjct: 467 LCDNGEPEKALEIFEKIEK 485
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 1/277 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A ++F +M + R P + ++ L + K + ++ ++M+ G ++ + IMIN
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C ++ A ++ +P F TLINGL E R+SEAL+ + + G +P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
T NA+V C + +++DA ++D M + G PN TY VL + K+G+T A +
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
++M + V Y I++ C + +D A +++EM+ +G + +Y+TLI C+
Sbjct: 236 RKMEERKIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ DD K ++M+ I P FS L EG
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + LID CK +++A + D M + P+I+++ IL+ G+ + +
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++R+M G D V+Y +I C + + A ELF+EM + +P + L++G
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +AL+ F + +K E + YN ++ C + +++DA+ + + G+ P+
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+TY+I++ L K G EA +F++M + G P TY I++R + ++
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKM-EEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 245 DEMKARG 251
+E+K G
Sbjct: 586 EEIKRCG 592
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 143/312 (45%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ L + +I+ C+ R + A K+ K ++PD +++ L+ G +
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ M + G +P +++ ++N C + +AV L M T +P+ +
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + + + A++ + ++R + +A Y+ ++ C +++A+ + +EM G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ Y ++ AGR ++ + + M ++ T P V + ++ F ++ A
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT-PDVVAFSALIDCFVKEGKLREA 336
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--- 297
+ EM RG+ P Y++LI+ C E++LD A M+ G P + F+ L
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 298 --KQALRDEGME 307
K L D+G+E
Sbjct: 397 YCKANLIDDGLE 408
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 104/201 (51%), Gaps = 1/201 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N LI C+ +E A+E+F +M RR PDI SY ILL+G
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ +++ E D+ Y I+I+ C+A + D+A +LF + KP + +I G
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + LSEA F + ++ G P TYN ++ A+ + ++++E+++CG +
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 185 TRTYDIVLHHLIKAGRTEEAY 205
T +V+ ++ GR ++++
Sbjct: 597 ASTVKMVV-DMLSDGRLKKSF 616
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 97 DEAVELFREMEATNCKPSPHI-------------------------------------FC 119
D+AV+LF+EM T +P P +
Sbjct: 54 DDAVDLFQEM--TRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+IN ++LS A G+ K G+EP+ T++ ++ C R+++A ++D M +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P T + +++ L G+ +A + RM + G +P TY V+++ C + Q +
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
AM + +M+ R + YS +I+ LC + LD+A F EM G + +++ L +
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
G + L + + K + TP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITP 315
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 155/301 (51%), Gaps = 5/301 (1%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+++++ FN LI+ + + V+ A V K+ K F+PD +++ L+ G +
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E + EM G++P++ +Y +I C + AV L ++M+ +P I+ T+I+GL
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++ +SEAL F + K +G P+ TY+ ++ C S + +A + +EM I P+
Sbjct: 235 CKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDV 294
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T++I++ L K G EA + K M K G EP +TY ++ +C +V A ++D
Sbjct: 295 VTFNILVDKLCKEGMLSEAQGIIKIMIEK-GVEPNYATYNSLMNGYCLQNKVFEARMVFD 353
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP----GQLFSNLKQAL 301
M +G +P + Y+ LIN C ++D+A + F EM G+ P L S L QA
Sbjct: 354 AMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAG 413
Query: 302 R 302
R
Sbjct: 414 R 414
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L +N +I CK A + KM K PDI Y +++G + + +
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ E+K G PDV +Y I+++ C++ + +EA LF EM + N P F L++
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E LSEA ++G EP TYN+++ YC ++ +A + D M G PN
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+I+++ KA R +EA +F MS + G P Y ++ C + A ++
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFR-GLIPNTFNYNTLISGLCQAGRHCEARELF 422
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M+A+G P + + L++SLC LD+A + F+ M D ++P + L +A+
Sbjct: 423 KDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKS 482
Query: 305 G 305
G
Sbjct: 483 G 483
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 139/272 (51%), Gaps = 1/272 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK G + ++ +N +ID LCK R V A ++F ++K + PD+ +Y+IL+ G
Sbjct: 215 MDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQ 274
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM PDVV++ I+++ C EA + + M +P+ + +
Sbjct: 275 KEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNS 334
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG + ++ EA F +G P +YN ++ YC + RI++A + DEM G
Sbjct: 335 LMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG 394
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT Y+ ++ L +AGR EA +FK M + G P + T I++ C +D A
Sbjct: 395 LIPNTFNYNTLISGLCQAGRHCEARELFKDM-QAQGCSPDLVTCTILLDSLCKLGYLDNA 453
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
+R++ M+ + P + Y LI ++ K+
Sbjct: 454 LRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 1/233 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P +V + +++A K Y + L + +E + F LIN +R+ A
Sbjct: 82 PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G+ K GFEP+A T+++++ C+ + A DEM G PN TY+ ++ K
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G+T A + K+M K G P + Y ++ C + V A+ I+ E+K +GV P +
Sbjct: 202 IGKTTVAVGLLKKMD-KAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVF 260
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
YS L++ LC+ D+ ++A F EM+ + I P F+ L L EGM A
Sbjct: 261 TYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEA 313
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 134/277 (48%), Gaps = 1/277 (0%)
Query: 21 CKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDV 80
C ++E A F+ M + P I + LL + K+ ++ + + ++ E DV
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
+ I+IN +R D A + ++ +P F +LINGL E + + A++FF +
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
G++P TYN ++ +C + A ++ +M K G P+ Y+ ++ L K
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
EA +F + K G P V TY I++ C + Q + A +++EM + ++P + ++
Sbjct: 240 VSEALDIFSEIKGK-GVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFN 298
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
L++ LC E L +A + M++ G+ P +++L
Sbjct: 299 ILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSL 335
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 1/234 (0%)
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
CS ++A+ F M + P F L++ L K L + + E +
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
+N ++ + R++ A+ ++ ++ K G P+ T+ +++ L + A F
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M G +P + TY +++ FC + +A+ + +M G P + +Y+T+I+ LC +
Sbjct: 180 MV-ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDR 238
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ +A F E+ G+RP +S L L + +E A L ++ L P
Sbjct: 239 LVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMP 292
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 150/281 (53%), Gaps = 7/281 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++ +CKS A E+ KM++R+ D Y+I+++G + +L + ++ EM+
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF+ D++ Y +I C A R+D+ +L R+M P F LI+ E +L
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + +RG P+ TY +++ +C +++ A M+D M G GPN RT++I++
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KA ++ +F++MS + TV TY +++ FC ++++A ++ EM +R V
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDIGI 287
P + Y L++ LC + + A + F+++ LDIGI
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 153/322 (47%), Gaps = 1/322 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + + F+ LI+ LC V A E+ D+M + P + + L+ G +
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ M + GF+P+ V+YG ++ C + + A+EL R+ME K + +I
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL + L A F + + +GF+ + Y ++ +C++ R +D +++ +M K I
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ + ++ +K G+ EA + K M ++ G P TY ++ FC Q+D A
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D M ++G P + ++ LIN C + +DD + F++M G+ ++ L Q
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
+ G E A L Q++ R P
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRP 455
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 154/319 (48%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G K ++ + LI C + + ++ M KR+ PD+ +++ L++ + ++
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+++EM G PD V+Y +I+ C + D+A + M + C P+ F
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING + + L+ F + RG + TYN ++ +C ++ A + EM
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y I+L L G E+A +F+++ K E + Y I++ C ++VD A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I LC + L +A F++M + G P G ++ L +A
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 301 LRDEGMEETAVVLAQKIDK 319
EG + L ++I +
Sbjct: 572 HLGEGDATKSAKLIEEIKR 590
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 150/319 (47%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K L N L++ LC + V A + D+M + F P+ +Y +L+ +
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ R+M++ + D V Y I+I+ C D A LF EME K I+ T
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G R + + KR P+ ++A++ + ++ +A + EM + G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T TY ++ K + ++A + M K G P + T+ I++ +C +D
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK-GCGPNIRTFNILINGYCKANLIDDG 406
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ +M RGV+ Y+TLI C KL+ A + FQEM+ +RP + L
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 301 LRDEGMEETAVVLAQKIDK 319
L D G E A+ + +KI+K
Sbjct: 467 LCDNGEPEKALEIFEKIEK 485
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 149/316 (47%), Gaps = 16/316 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N LI C+ +E A+E+F +M RR PDI SY ILL+G
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ +++ E D+ Y I+I+ C+A + D+A +LF + KP + +I G
Sbjct: 477 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + LSEA F + ++ G P TYN ++ A+ + ++++E+++CG +
Sbjct: 537 LCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY--NAQVDMAMR 242
T A S RM K G EP V T+ ++R FC NA V A
Sbjct: 597 ASTLRF-------------ALSTLARM-LKAGHEPDVFTFTTLLRPFCLEENASVYDAPT 642
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ MKA G P + Y+T+I L + + + +M + G +P S L
Sbjct: 643 LFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLC 702
Query: 303 DEGMEETAVVLAQKID 318
+ + +A++L +K++
Sbjct: 703 KQDLHGSAILLLRKME 718
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 136/277 (49%), Gaps = 1/277 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A ++F +M + R P + ++ L + K + ++ ++M+ G ++ + IMIN
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C ++ A ++ +P F TLINGL E R+SEAL+ + + G +P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
T NA+V C + +++DA ++D M + G PN TY VL + K+G+T A +
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
++M + V Y I++ C + +D A +++EM+ +G + +Y+TLI C+
Sbjct: 236 RKMEERKIKLDAVK-YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ DD K ++M+ I P FS L EG
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEG 331
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 152/326 (46%), Gaps = 25/326 (7%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + LID CK +++A + D M + P+I+++ IL+ G+ + +
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++R+M G D V+Y +I C + + A ELF+EM + +P + L++G
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +AL+ F + +K E + YN ++ C + +++DA+ + + G+ P+
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+TY+I++ L K G EA +F++M + G P TY I++R + ++
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKM-EEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 245 DEMK------------------AR----GVLPVMHMYSTLINSLCHEDKLD--DACKYFQ 280
+E+K AR G P + ++TL+ C E+ DA F+
Sbjct: 586 EEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFK 645
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGM 306
M +G +P ++ + + L + M
Sbjct: 646 NMKAMGYKPNVVTYNTVIKGLLNGNM 671
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 143/312 (45%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ L + +I+ C+ R + A K+ K ++PD +++ L+ G +
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ M + G +P +++ ++N C + +AV L M T +P+ +
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + + + A++ + ++R + +A Y+ ++ C +++A+ + +EM G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ Y ++ AGR ++ + + M ++ T P V + ++ F ++ A
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT-PDVVAFSALIDCFVKEGKLREA 336
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL--- 297
+ EM RG+ P Y++LI+ C E++LD A M+ G P + F+ L
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 298 --KQALRDEGME 307
K L D+G+E
Sbjct: 397 YCKANLIDDGLE 408
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 97 DEAVELFREMEATNCKPSPHI-------------------------------------FC 119
D+AV+LF+EM T +P P +
Sbjct: 54 DDAVDLFQEM--TRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+IN ++LS A G+ K G+EP+ T++ ++ C R+++A ++D M +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P T + +++ L G+ +A + RM + G +P TY V+++ C + Q +
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
AM + +M+ R + YS +I+ LC + LD+A F EM G + +++ L +
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
G + L + + K + TP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITP 315
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 160/318 (50%), Gaps = 1/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ L N LI+ C + + V K+ K + PD + L++G +
Sbjct: 91 MEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 150
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ GF+ + VSYG ++N C AV+L R +E + +P ++ T
Sbjct: 151 VKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYST 210
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL +K +++A FF + RG P TY+ ++ +C + ++ A+ +++EM
Sbjct: 211 IIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKN 270
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+I++ L K G+ +EA + M K G V TY V+ C + +D A
Sbjct: 271 INPNVYTYNILIDALCKEGKVKEAKKLLAEMHHK-GQPADVVTYNSVLDGLCKSQNLDKA 329
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ +MK G+ P + Y+ LI+ LC +L +A K FQ +L G + ++ +
Sbjct: 330 TALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISG 389
Query: 301 LRDEGMEETAVVLAQKID 318
L EGM + A+ + K++
Sbjct: 390 LCKEGMFDKALAMKSKME 407
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 134/283 (47%), Gaps = 1/283 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + L++ LCK A ++ ++ R PD+ Y+ +++G + K +
Sbjct: 165 GFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQA 224
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + EM G P+V++Y +I C A + A L EM N P+ + + LI+
Sbjct: 225 YDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDA 284
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ EA + + +G + TYN+V+ C S ++ A + +M+K GI PN
Sbjct: 285 LCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPN 344
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L K GR + A +F+ + K G V TY +++ C D A+ +
Sbjct: 345 KYTYTALIDGLCKGGRLKNAQKLFQHLLVK-GCCIDVRTYNVMISGLCKEGMFDKALAMK 403
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+M+ G +P + +I SL +D+ D A K M+ G+
Sbjct: 404 SKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +ID LCK + V +A + F +M R P++ +Y+ L+ G+ L+ + EM
Sbjct: 208 YSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMI 267
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+V +Y I+I+A C + EA +L EM + ++++GL + L
Sbjct: 268 LKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLD 327
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F + KK G +P TY A++ C R+ +A ++ + G + RTY++++
Sbjct: 328 KATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMI 387
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K G ++A ++ +M G P T++I++R + D A ++ M A+G+
Sbjct: 388 SGLCKEGMFDKALAMKSKMEDN-GCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446
Query: 253 L 253
L
Sbjct: 447 L 447
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 1/306 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+F +++ L K +H A + +M+ + +P++ + IL+ + + V ++
Sbjct: 67 EFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKI 126
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G++PD ++ ++ C ++ ++ A + + + TL+NGL
Sbjct: 127 LKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGET 186
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A++ + R P+ Y+ ++ C +N AY EM GI PN TY +
Sbjct: 187 RCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTL 246
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ AG+ A+S+ M K P V TY I++ C +V A ++ EM +G
Sbjct: 247 IWGFCLAGQLMGAFSLLNEMILK-NINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKG 305
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ Y+++++ LC LD A F +M GI+P ++ L L G + A
Sbjct: 306 QPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQ 365
Query: 312 VLAQKI 317
L Q +
Sbjct: 366 KLFQHL 371
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 101/214 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + ++ LI C + + A + ++M + +P++ +Y IL++ ++
Sbjct: 231 MNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGK 290
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G DVV+Y +++ C ++ D+A LF +M+ +P+ + +
Sbjct: 291 VKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTA 350
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL RL A + F +G + TYN ++ C + A M +M G
Sbjct: 351 LIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNG 410
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
PN T+DI++ L + ++A + M K
Sbjct: 411 CIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAK 444
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 37/255 (14%)
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
D+ V F + P F ++ L K A+ Q + +G EP T N +
Sbjct: 47 DDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNIL 106
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRT----------------------------- 187
+ +C ++ ++ ++ ++ K G P+T T
Sbjct: 107 INCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGF 166
Query: 188 ------YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
Y +L+ L K G T A + RM T P V Y ++ C + V+ A
Sbjct: 167 QMNQVSYGTLLNGLCKIGETRCAVKLL-RMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAY 225
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ EM ARG+ P + YSTLI C +L A EM+ I P ++ L AL
Sbjct: 226 DFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDAL 285
Query: 302 RDEG-MEETAVVLAQ 315
EG ++E +LA+
Sbjct: 286 CKEGKVKEAKKLLAE 300
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P + +L +L+K A S+ ++M K G EP + T I++ FC+ Q+ +
Sbjct: 63 PPIIEFGKILGYLVKMKHYPTAISLSRQMEVK-GIEPNLVTLNILINCFCHLGQMAFSFS 121
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ ++ G P +TL+ LC + ++ + + +++ G + + L L
Sbjct: 122 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLC 181
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
G AV L + I+ P
Sbjct: 182 KIGETRCAVKLLRMIEDRSTRP 203
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 148/290 (51%), Gaps = 4/290 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D LCK ++ A+ V + +KR F PD+ +Y L+ Q + + +M
Sbjct: 135 YNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT 194
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G+ P +VS+ +I C A+R +A+E+F EM + P+ + +I+GL +L
Sbjct: 195 EEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLD 254
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA Q + G P+ Y +V + + R++ A ++ M G P+ TY +V+
Sbjct: 255 EAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVI 314
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR ++A+ +F+ + P V TY ++ +C ++VD ++ EM R
Sbjct: 315 DKLCKVGRVDDAHEIFRELVANK-CSPNVVTYSALIGGYCRASRVDEGGKVMREMACR-- 371
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
P + Y+T+I L D+ ++A F+EM + G P + + LK+ALR
Sbjct: 372 -PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALR 420
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 137/281 (48%), Gaps = 5/281 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNL 61
L PD + LI+ LCK V+ A ++F KM P+ +Y L++G +Q L
Sbjct: 89 LAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRL 148
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ V E + F PDVV+Y ++ A R DEA+ F +M P+ F +
Sbjct: 149 DAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAI 208
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I GL +RL++AL+ F + R F P TY+ V+ C S ++++A +++D M G
Sbjct: 209 ITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGC 268
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ Y ++ AGR + A + +RM + G P V TY +V+ C +VD A
Sbjct: 269 RPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ-GCIPDVVTYTVVIDKLCKVGRVDDAH 327
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
I+ E+ A P + YS LI C ++D+ K +EM
Sbjct: 328 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 368
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 3/299 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFD-KMKKRRFDPDIKSYTILLEGWGQQK 59
MD G++ + ++ LC+ V +A E FD ++ PD+ SYT L+ G +
Sbjct: 51 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 110
Query: 60 NLLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ + +++R+M G P+ +Y +++ C R D A + E + P +
Sbjct: 111 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTY 170
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
TL+ L R+ EAL F Q + G+ P ++NA++ C + R+ DA + +EM
Sbjct: 171 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 230
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
PN TY +V+ L K+ + +EA + RM + G P + Y +V F ++D
Sbjct: 231 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE-GCRPDLVAYTPLVLGFSAAGRLD 289
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A+ + M ++G +P + Y+ +I+ LC ++DDA + F+E++ P +S L
Sbjct: 290 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSAL 348
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 4/224 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L FN +I LC++R + A EVF++M R F P++ +Y+++++G +
Sbjct: 193 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 252
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ M +G PD+V+Y ++ +A R D A+ L R M + C P +
Sbjct: 253 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 312
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L R+ +A + F + P TY+A++G YC + R+++ ++M EM
Sbjct: 313 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---A 369
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
PN TY+ ++ L R EEAY +F+ MS + G P TY
Sbjct: 370 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMS-ECGFVPDARTY 412
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 137/273 (50%), Gaps = 3/273 (1%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF-RE 105
+Y +L+ G+ +L + + REM +G + + + I++ C R +A+E F
Sbjct: 27 TYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDAS 86
Query: 106 MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSM 164
+E + +P + TLINGL R+ A F + G P A TYNA+V C
Sbjct: 87 LELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQD 146
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
R++ A ++ E RK P+ TY+ ++ L + GR +EA + F +M+ + G PT+ ++
Sbjct: 147 RLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEE-GYVPTLVSF 205
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ C ++ A+ +++EM R P + YS +I+ LC D+LD+A + M+
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 265
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
G RP ++ L G ++A+ L +++
Sbjct: 266 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 298
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 3/229 (1%)
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
A +++A++LFRE S + LI G + L A + G + T
Sbjct: 4 AGSHNQALQLFRE-NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRT 62
Query: 153 YNAVVGAYCWSMRINDAYRMMD-EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ ++ C R+ A D + P+ +Y +++ L K GR + A+ +F++M
Sbjct: 63 TSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKM 122
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
G P TY +V C ++D A + E + R P + Y+TL+ +L +
Sbjct: 123 VAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGR 182
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
+D+A F +M + G P F+ + L R + + V + ID+
Sbjct: 183 VDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR 231
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 158/322 (49%), Gaps = 11/322 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR------RFDPDIKSYTILLEG 54
M K G + L+ LC+S +++ A E+ M P+ SY+I+++G
Sbjct: 433 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 492
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ E+++EMK G PDV+SY +I+ C + ++ +A LF EM +P
Sbjct: 493 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 552
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
F LI+ L E ++ EA + +RG P TY +V C + RI++A ++
Sbjct: 553 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 612
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT-----EPTVSTYEIVVR 229
+M+K G P+ TY ++ L + G + A + K+M G +P V +Y I++
Sbjct: 613 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 672
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C + + D A ++ EMKA GV+P + Y++LI+ C KL+DA F EM+D G++
Sbjct: 673 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQL 732
Query: 290 PGQLFSNLKQALRDEGMEETAV 311
+S + EG + A+
Sbjct: 733 NAVTYSVMIHGFCKEGQIDKAL 754
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 143/277 (51%), Gaps = 9/277 (3%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
++ +ID LCK + A+E+F +MK PD+ SYT L+ G+ + ++ EM
Sbjct: 485 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 544
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
D G +PDV ++ ++I+ C + EA EL M C P+ + TL+ GL R+
Sbjct: 545 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY----RMMDEMRKCGIG--PNT 185
SEA Q F + +K G P+ TY ++ C + I A +M+ + + G P+
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
+Y I++ L K GR +EA +FK M + G P V +Y ++ FC + +++ A +++
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEM-KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 723
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
EM +GV YS +I+ C E ++D A FQ+M
Sbjct: 724 EMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 758
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 160/330 (48%), Gaps = 9/330 (2%)
Query: 3 KFGLKQE--LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++G+K + L ++ +ID LCK R + A+E+F +MK + PD+ SYT L+ G+
Sbjct: 293 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGK 352
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM D G +PDV + ++I+ C + EA +L + C P T
Sbjct: 353 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTT 412
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY----RMMDEM 176
L+ GL + R+S+A Q F + +K G P T ++ C S I A M+ +
Sbjct: 413 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 472
Query: 177 RKCGIG--PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
GI PN +Y I++ L K GR +EA +FK M + G P V +Y ++ FC +
Sbjct: 473 SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEM-KALGVIPDVISYTSLIHGFCRS 531
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+ A +++EM GV P + +S LI+ LC E K+ +A + + M+ G P +
Sbjct: 532 GKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 591
Query: 295 SNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ L + L A L K+ KL P
Sbjct: 592 TTLVKGLCMNDRISEATQLFMKMQKLGCLP 621
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 154/316 (48%), Gaps = 11/316 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR------RFDPDIKSYTILLEG 54
M K G + + + L+ LC++ ++ A ++ +M + P + SY+I+++G
Sbjct: 252 MQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 311
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ + E+++EMK G PDV+SY +I+ C + ++++A LF EM +P
Sbjct: 312 LCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 371
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
LI+ L + ++ EA + +RG P+ T +V C RI+ A ++
Sbjct: 372 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFL 431
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG-----TEPTVSTYEIVVR 229
+M+K G PN T ++ L ++G + A + K M +P +Y I++
Sbjct: 432 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 491
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C + D A ++ EMKA GV+P + Y++LI+ C K DA F EM+DIG++P
Sbjct: 492 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 551
Query: 290 PGQLFSNLKQALRDEG 305
FS L L EG
Sbjct: 552 DVTTFSVLIDMLCKEG 567
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 156/328 (47%), Gaps = 11/328 (3%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K L ++ +ID LCK R + A+E+F +MK + PD+ SYT L+ G+ +
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ EM D G DV + ++I+ C + EA EL M C + TLI GL
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 237
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR--------K 178
+ R+SEA + F +K G P+A Y ++ C + IN A ++ EM K
Sbjct: 238 MKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIK 297
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
C P +Y I++ L K R +EA +FK M + G P V +Y ++ FC + + +
Sbjct: 298 C--KPTLISYSIIIDGLCKDRREDEARELFKEM-KAQGIMPDVISYTTLIHGFCLSGKWE 354
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +++EM G+ P + S LI+ LC + K+ +A K + ++ G P + L
Sbjct: 355 KAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV 414
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTPLV 326
+ L + A L K+ KL P V
Sbjct: 415 KGLCMKHRISKATQLFLKMQKLGCMPNV 442
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 141/290 (48%), Gaps = 7/290 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ LID CK V A E+ + M +R DI +Y+ L++G +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------EATNCKPS 114
+ +++ MK G PD ++YG ++ C + + A+ L +EM CKP+
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +I+GL ++R EA + F + K +G P+ +Y +++ +C S + A + +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM GI + T +++ L K G+ EA + + M ++ G + TY +++ C
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQR-GCILDIVTYSTLIKGLCMK 239
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ A R++ M+ G P Y TL+ LC ++ A + QEML+
Sbjct: 240 HRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLN 289
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 124/286 (43%), Gaps = 46/286 (16%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G +PDV + G++I+ C + EA EL M C + TLI GL + R+SEA
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR--------KCGIGPNTR 186
Q F KK G P+A Y ++ C + +IN A + EM KC P
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC--KPTLV 122
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC-----------YNA 235
+Y I++ L K R +EA +FK M + G P V +Y ++ FC +N
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEM-KAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNE 181
Query: 236 QVDMAMR------------------------IWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+D+ +R + + M RG + + YSTLI LC + +
Sbjct: 182 MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ +A + F M +G RP + L + L G TA+ L Q++
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEM 287
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 148/290 (51%), Gaps = 4/290 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D LCK ++ A+ V + +KR F PD+ +Y L+ Q + + +M
Sbjct: 85 YNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT 144
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G+ P +VS+ +I C A+R +A+E+F EM + P+ + +I+GL +L
Sbjct: 145 EEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLD 204
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA Q + G P+ Y +V + + R++ A ++ M G P+ TY +V+
Sbjct: 205 EAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVI 264
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR ++A+ +F+ + P V TY ++ +C ++VD ++ EM R
Sbjct: 265 DKLCKVGRVDDAHEIFRELVANK-CSPNVVTYSALIGGYCRASRVDEGGKVMREMACR-- 321
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
P + Y+T+I L D+ ++A F+EM + G P + + LK+ALR
Sbjct: 322 -PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALR 370
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 137/281 (48%), Gaps = 5/281 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNL 61
L PD + LI+ LCK V+ A ++F KM P+ +Y L++G +Q L
Sbjct: 39 LAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRL 98
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ V E + F PDVV+Y ++ A R DEA+ F +M P+ F +
Sbjct: 99 DAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAI 158
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I GL +RL++AL+ F + R F P TY+ V+ C S ++++A +++D M G
Sbjct: 159 ITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGC 218
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ Y ++ AGR + A + +RM + G P V TY +V+ C +VD A
Sbjct: 219 RPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ-GCIPDVVTYTVVIDKLCKVGRVDDAH 277
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
I+ E+ A P + YS LI C ++D+ K +EM
Sbjct: 278 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM 318
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 145/299 (48%), Gaps = 3/299 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFD-KMKKRRFDPDIKSYTILLEGWGQQK 59
MD G++ + ++ LC+ V +A E FD ++ PD+ SYT L+ G +
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 60 NLLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ + +++R+M G P+ +Y +++ C R D A + E + P +
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
TL+ L R+ EAL F Q + G+ P ++NA++ C + R+ DA + +EM
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
PN TY +V+ L K+ + +EA + RM + G P + Y +V F ++D
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE-GCRPDLVAYTPLVLGFSAAGRLD 239
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A+ + M ++G +P + Y+ +I+ LC ++DDA + F+E++ P +S L
Sbjct: 240 SALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSAL 298
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 4/224 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L FN +I LC++R + A EVF++M R F P++ +Y+++++G +
Sbjct: 143 MTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQ 202
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ M +G PD+V+Y ++ +A R D A+ L R M + C P +
Sbjct: 203 LDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTV 262
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L R+ +A + F + P TY+A++G YC + R+++ ++M EM
Sbjct: 263 VIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---A 319
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
PN TY+ ++ L R EEAY +F+ MS + G P TY
Sbjct: 320 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMS-ECGFVPDARTY 362
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 3/249 (1%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFCTLINGLGSEK 129
M +G + + + I++ C R +A+E F +E + +P + TLINGL
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 130 RLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
R+ A F + G P A TYNA+V C R++ A ++ E RK P+ TY
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ L + GR +EA + F +M+ + G PT+ ++ ++ C ++ A+ +++EM
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEE-GYVPTLVSFNAIITGLCRARRLADALEVFNEMI 179
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
R P + YS +I+ LC D+LD+A + M+ G RP ++ L G +
Sbjct: 180 DRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLD 239
Query: 309 TAVVLAQKI 317
+A+ L +++
Sbjct: 240 SALGLLRRM 248
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMD-EMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
G + T + ++ C R+ A D + P+ +Y +++ L K GR +
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A+ +F++M G P TY +V C ++D A + E + R P + Y+TL+
Sbjct: 65 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
+L ++D+A F +M + G P F+ + L R + + V + ID+
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR 181
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 152/297 (51%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ L++ LCK+ A+++FD M KR +PDI +Y LL+G+ + L+ M
Sbjct: 301 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEM 360
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G +PD + I+I A+ ++ D+A+ +F +M P+ + T+I+
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +A+ +F Q G P Y +++ C + + A ++ EM GI N
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ ++ K GR E+ +F M R G +P + TY ++ C ++D A ++
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYNTLIDGCCLAGKMDEATKLL 539
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M + GV P + Y TLIN C ++DDA F+EM+ G+ P ++ + Q L
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 154/301 (51%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +++ K ++A + +M R PD+ +Y+ ++ + + +
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA 255
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV M +G PD ++Y +++ +CS+ + EA+ ++M + +P+ + +L+N
Sbjct: 256 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R +EA + F KRG EP+ TY ++ Y + + + ++D M + GI P+
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++I++ K + ++A VF +M R+ G P V Y V+ + C + VD AM +
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKM-RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++M G+ P + +Y++LI+ LC DK D A + EMLD GI F+++ + E
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494
Query: 305 G 305
G
Sbjct: 495 G 495
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + +ID LCKS V+ A F++M P+I YT L+ G
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM D G + + + +I++HC R E+ +LF M KP + T
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ EA + G +P+ TY ++ YC R++DA + EM G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+I+L L RT A ++ ++ K GT+ +STY I++ C N D A
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSIT-KSGTQLELSTYNIILHGLCKNNLTDEA 640
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R++ + + ++ +I +L ++D+A F G+ P + +S + +
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700
Query: 301 LRDEGMEE 308
L ++G E
Sbjct: 701 LIEQGSLE 708
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 158/338 (46%), Gaps = 40/338 (11%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQE-VFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
K G + + F L+ LC + A + V +M + PD+ SY LL+G +
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRS 179
Query: 62 LSMNEVYREMKDD---GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
E+ M DD G PDVVSY ++N D+A + EM P +
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 239
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++I L + + +A++ K G P+ TYN+++ YC S + +A + +MR
Sbjct: 240 SSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS 299
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-------------- 224
G+ PN TY ++++L K GR+ EA +F M+++ G EP ++TY
Sbjct: 300 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGALV 358
Query: 225 ------EIVVR------------MFCYNA---QVDMAMRIWDEMKARGVLPVMHMYSTLI 263
+++VR + C A +VD AM ++ +M+ G+ P + Y T+I
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ LC +DDA YF++M+D G+ P ++++L L
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 1/267 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID+ CK V ++++FD M + PDI +Y L++G + ++ M
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+V+YG +IN +C R D+A+ LF+EM ++ P+ + ++ GL +R +
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + K G + E TYN ++ C + ++A RM + + TRT++I++
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F S G P V TY ++ ++ ++ M+ G
Sbjct: 664 GALLKCGRMDEAKDLFAAHSAN-GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYF 279
M ++++ L + A Y
Sbjct: 723 SADSRMLNSIVRKLLQRGDITRAGTYL 749
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 148/394 (37%), Gaps = 95/394 (24%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG---FEPDVVSY 83
E A+ VFD++ +R I L + +++ Y M G P V +Y
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 95
Query: 84 GIMINAHCSAKRYD-----------------------------------EAVEL-FREME 107
I+I C A R D +A+++ R M
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQ--------------------------FF--G 139
C P + L+ GL E R EAL+ FF G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 140 QSKK----------RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
S K RG P+ TY++++ A C + ++ A +++ M K G+ P+ TY+
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+LH +G+ +EA K+M R G EP V TY ++ C N + A +I+D M
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA--------- 300
RG+ P + Y TL+ + L + M+ GI+P +F+ L A
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394
Query: 301 -------LRDEGMEETAVVLAQKIDKLRKTPLVD 327
+R G+ V ID L K+ VD
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 63/152 (41%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G + EL +N ++ LCK+ + A +F + + +++ I++ +
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +G PDV +Y +M +E +LF ME C + +
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 731
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
++ L ++ A + ++ F EA T
Sbjct: 732 IVRKLLQRGDITRAGTYLFMIDEKHFSLEAST 763
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 152/313 (48%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N LI LC + + ++M K + P++ S I+++ ++ +
Sbjct: 191 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEA 250
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V M G EPDVV+Y +++ HC DEAV++F M C + + TLING
Sbjct: 251 HDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLING 310
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+R+ +A+ F + ++ P TY+ ++ C R+ DA + +EM CG PN
Sbjct: 311 YCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPN 370
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+L +L K R EA ++ K + +P V Y I + C ++ A ++
Sbjct: 371 LVTYSILLDYLCKNHRLAEAMALLKAI-EGSNLDPDVQVYNIAIDGMCRAGDLEAARDLF 429
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ RG+ P + ++ +I LC LD+A K F+EM + G G ++ + Q L
Sbjct: 430 SNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQN 489
Query: 305 GMEETAVVLAQKI 317
A+ L +++
Sbjct: 490 NKTSRAIQLLEEM 502
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ +I++ C V+ A V K+ K PD ++T L+ G
Sbjct: 82 MDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGK 141
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ +M +GF+P+VV+YG ++N C ++ EA+ LF EM A P + +
Sbjct: 142 IGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNS 201
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + + K P + N VV A C ++ +A+ ++D M + G
Sbjct: 202 LIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGG 261
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ +EA VF M R G V +Y ++ +C ++D A
Sbjct: 262 VEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRN-GCVCNVVSYNTLINGYCKIQRIDKA 320
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M +++EM + ++P YSTLI+ LCH +L DA F EM+ G P +S L
Sbjct: 321 MYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDY 380
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L A+ L + I+ P
Sbjct: 381 LCKNHRLAEAMALLKAIEGSNLDP 404
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 153/310 (49%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K + + N ++D LCK V A +V D M + +PD+ +Y L++G +
Sbjct: 222 MVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSE 281
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ M +G +VVSY +IN +C +R D+A+ LF EM P+ + T
Sbjct: 282 MDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYST 341
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL RL +A+ F + G P TY+ ++ C + R+ +A ++ +
Sbjct: 342 LIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSN 401
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ + Y+I + + +AG E A +F ++ + G +P V T+ I++R C +D A
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPR-GLQPDVWTHNIMIRGLCKRGLLDEA 460
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ EM G L Y+T+ L +K A + +EML G + L +
Sbjct: 461 SKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKM 520
Query: 301 LRDEGMEETA 310
L D+G++++
Sbjct: 521 LSDDGLDQSV 530
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 142/293 (48%), Gaps = 1/293 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + + F L+ LC + A +VFDKM F P++ +Y L+ G + + L
Sbjct: 119 KLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLT 178
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ EM G PD+ +Y +I+A C+ + L EM + P+ ++
Sbjct: 179 EALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVV 238
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L E +++EA + G EP+ TY A++ +C +++A ++ D M + G
Sbjct: 239 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 298
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
N +Y+ +++ K R ++A +F+ M R+ P TY ++ C+ ++ A+
Sbjct: 299 CNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQE-LIPNTMTYSTLIHGLCHVGRLQDAIA 357
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+++EM A G +P + YS L++ LC +L +A + + + P Q+++
Sbjct: 358 LFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYN 410
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 145/341 (42%), Gaps = 39/341 (11%)
Query: 22 KSRH---VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
KS H ++ A F +M P I + LL + K+ ++ + ++M G P
Sbjct: 30 KSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPP 89
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
DV + I+IN+ C R D A+ + ++ +P F TL+ GL ++ EAL F
Sbjct: 90 DVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVF 149
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH----- 193
+ GF+P TY ++ C ++ +A + EM GI P+ TY+ ++H
Sbjct: 150 DKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNL 209
Query: 194 ------------------------------HLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
L K G+ EA+ V M + G EP V T
Sbjct: 210 CEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQG-GVEPDVVT 268
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y ++ C +++D A++++D M G + + Y+TLIN C ++D A F+EM
Sbjct: 269 YAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMC 328
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ P +S L L G + A+ L ++ + P
Sbjct: 329 RQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIP 369
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 85/201 (42%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI LC ++ A +F++M P++ +Y+ILL+ + L + + ++
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE 398
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+PDV Y I I+ C A + A +LF + +P +I GL L
Sbjct: 399 GSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLD 458
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + + G TYN + + + + A ++++EM G + T +++
Sbjct: 459 EASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLV 518
Query: 193 HHLIKAGRTEEAYSVFKRMSR 213
L G + + R
Sbjct: 519 KMLSDDGLDQSVKQILCEFMR 539
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 161/325 (49%), Gaps = 1/325 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + L + L+ +C V A E+FDKM + F DI Y L+ + +
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E++R M + + +YG++I++ C + +++FREM P+ ++ +LI
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL +L EA+ F + +G + TYN+++ A C +A R +M GI
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ T+ ++ HL K G+ +EAY +F+ M K G P + TY ++ C + Q+D A+R
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMI-KQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+++ M RG+ + Y+TLIN C K ++A F++M + P ++ L +AL
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300
Query: 303 DEGMEETAVVLAQKIDKLRKTPLVD 327
G TA L + ++P +D
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLD 325
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 1/282 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + +N LI C+ + A F +M PD+ ++T L++ ++ +
Sbjct: 144 GIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEA 203
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M G P++V+Y ++N C + D AV LF M K + TLING
Sbjct: 204 YKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLING 263
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + EA+ F + + P TY ++ A + RI A + + M+ CG P+
Sbjct: 264 YCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPS 323
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++L L K G EEA VF+ + + +P++ Y I++ + + AM I+
Sbjct: 324 LDTYTVLLDGLCKNGCIEEAIDVFRSL-KSIKYKPSIRIYSILIGGMFQARRWESAMEIF 382
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
DE+ G++P + Y+ +IN LC E KL +A + F +M + G
Sbjct: 383 DEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESG 424
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 168/359 (46%), Gaps = 36/359 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ + LI+ L K+R RA E+ +M + +Y ++++ +
Sbjct: 35 MTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGL 94
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK-------- 112
+ +++REM + G P+V+ Y +IN C + EAV LF EM + K
Sbjct: 95 AIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNS 154
Query: 113 ---------------------------PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
P F TLI+ L + ++ EA + F K+G
Sbjct: 155 LIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQG 214
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P TYN+++ C +++ A R+ + M + GI + +Y+ +++ +G+TEEA
Sbjct: 215 EAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAM 274
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++F++M + T P+++TY I+++ N ++ A +++ M+ G P + Y+ L++
Sbjct: 275 TLFRKMQYEELT-PSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDG 333
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
LC +++A F+ + I +P +++S L + E+A+ + +I + P
Sbjct: 334 LCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVP 392
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 4/283 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD F LID L K V+ A ++F+ M K+ P+I +Y LL G +
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M + G + DV+SY +IN +C++ + +EA+ LFR+M+ PS + L+ L
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ A + F + G P TY ++ C + I +A + ++ P+ R
Sbjct: 301 QNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIR 360
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y I++ + +A R E A +F + G P + TY I++ C ++ A R++ +
Sbjct: 361 IYSILIGGMFQARRWESAMEIFDEIP-TVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQ 419
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M+ G ++ +I E+++ A ++ + M + P
Sbjct: 420 MEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSP 462
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 118/232 (50%), Gaps = 1/232 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N LI+ C S E A +F KM+ P I +YTILL+ Q + +
Sbjct: 249 GIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTA 308
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M+ G P + +Y ++++ C +EA+++FR +++ KPS I+ LI G
Sbjct: 309 KELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGG 368
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +R A++ F + G P TYN ++ C ++ +A R+ +M + G +
Sbjct: 369 MFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQD 428
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+++ ++ ++ + ++A KRM R+ P S ++V ++ +AQ
Sbjct: 429 EISFNFIIRGFLQENQVQKAMEFLKRM-REKNFSPNDSVTLMLVNLYAADAQ 479
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 1/264 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N L++ LC ++ A +F+ M +R D+ SY L+ G+
Sbjct: 210 MIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGK 269
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++R+M+ + P + +Y I++ A R A ELF M+ PS +
Sbjct: 270 TEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTV 329
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL + EA+ F K ++P Y+ ++G + R A + DE+ G
Sbjct: 330 LLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVG 389
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+I+++ L K G+ EA +F +M + G E ++ ++R F QV A
Sbjct: 390 LVPNIVTYNIMINGLCKEGKLLEAERLFVQM-EESGCEQDEISFNFIIRGFLQENQVQKA 448
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN 264
M M+ + P + L+N
Sbjct: 449 MEFLKRMREKNFSPNDSVTLMLVN 472
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 62/121 (51%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI + ++R E A E+FD++ P+I +Y I++ G ++ LL ++ +M+
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQME 421
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G E D +S+ +I + +A+E + M N P+ + L+N ++ + S
Sbjct: 422 ESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSS 481
Query: 133 E 133
E
Sbjct: 482 E 482
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 47/94 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N +I+ LCK + A+ +F +M++ + D S+ ++ G+ Q+ +
Sbjct: 389 GLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKA 448
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDE 98
E + M++ F P+ +++N + + + E
Sbjct: 449 MEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSE 482
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 158/322 (49%), Gaps = 11/322 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR------RFDPDIKSYTILLEG 54
M K G + L+ LC+S +++ A E+ M P+ SY+I+++G
Sbjct: 589 MQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDG 648
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ E+++EMK G PDV+SY +I+ C + ++ +A LF EM +P
Sbjct: 649 LCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPD 708
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
F LI+ L E ++ EA + +RG P TY +V C + RI++A ++
Sbjct: 709 VTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFM 768
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT-----EPTVSTYEIVVR 229
+M+K G P+ TY ++ L + G + A + K+M G +P V +Y I++
Sbjct: 769 KMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 828
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C + + D A ++ EMKA GV+P + Y++LI+ C KL+DA F EM+D G++
Sbjct: 829 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQL 888
Query: 290 PGQLFSNLKQALRDEGMEETAV 311
+S + EG + A+
Sbjct: 889 NAVTYSVMIHGFCKEGQIDKAL 910
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 143/277 (51%), Gaps = 9/277 (3%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
++ +ID LCK + A+E+F +MK PD+ SYT L+ G+ + ++ EM
Sbjct: 641 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
D G +PDV ++ ++I+ C + EA EL M C P+ + TL+ GL R+
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY----RMMDEMRKCGIG--PNT 185
SEA Q F + +K G P+ TY ++ C + I A +M+ + + G P+
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
+Y I++ L K GR +EA +FK M + G P V +Y ++ FC + +++ A +++
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEM-KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFN 879
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
EM +GV YS +I+ C E ++D A FQ+M
Sbjct: 880 EMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 914
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 9/330 (2%)
Query: 3 KFGLKQE--LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++G+K + L ++ +ID LCK R + A+E+F++MK + PD+ SYT L+ G+
Sbjct: 449 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGK 508
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM D G +PDV + ++I+ C + EA +L + C T
Sbjct: 509 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTT 568
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY----RMMDEM 176
L+ GL + R+S+A Q F + +K G P T ++ C S I A M+ +
Sbjct: 569 LVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT 628
Query: 177 RKCGIG--PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
GI PN +Y I++ L K GR +EA +FK M + G P V +Y ++ FC +
Sbjct: 629 SPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEM-KALGVIPDVISYTSLIHGFCRS 687
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+ A +++EM GV P + +S LI+ LC E K+ +A + + M+ G P +
Sbjct: 688 GKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTY 747
Query: 295 SNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ L + L A L K+ KL P
Sbjct: 748 TTLVKGLCMNDRISEATQLFMKMQKLGCLP 777
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 144/292 (49%), Gaps = 12/292 (4%)
Query: 3 KFGLKQE--LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++G+K + L ++ +ID LCK R + A+E+F +MK + PD+ SYT L+ G+
Sbjct: 156 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGK 215
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM D G +PDV + G++I+ C + EA EL M C + T
Sbjct: 216 WEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYST 275
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR--- 177
LI GL + R+SEA Q F KK G P+A Y ++ C + +IN A + EM
Sbjct: 276 LIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDT 335
Query: 178 -----KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
KC I P+ T +++ L K G+ EA + + M ++ G + TY +++ C
Sbjct: 336 SQYGIKC-IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQR-GCILDIVTYSTLIKGLC 393
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ A ++ M+ G P Y TL+ LC ++ A + QEML+
Sbjct: 394 MEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLN 445
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 152/316 (48%), Gaps = 11/316 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR------RFDPDIKSYTILLEG 54
M K G + + + L+ LC++ ++ A ++ +M + P + SY+I+++G
Sbjct: 408 MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 467
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ + E++ EMK G PDV+SY +I+ C + ++++A LF EM +P
Sbjct: 468 LCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 527
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
LI+ L + ++ EA + +RG + T +V C RI+ A ++
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFL 587
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG-----TEPTVSTYEIVVR 229
+M+K G PN T ++ L ++G + A + K M +P +Y I++
Sbjct: 588 KMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIID 647
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C + D A ++ EMKA GV+P + Y++LI+ C K DA F EM+DIG++P
Sbjct: 648 GLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQP 707
Query: 290 PGQLFSNLKQALRDEG 305
FS L L EG
Sbjct: 708 DVTTFSVLIDMLCKEG 723
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 152/325 (46%), Gaps = 19/325 (5%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTI---------LLEGWGQQ 58
PD FN LI+ LC + V + +R + PDI +Y+I L++ ++
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ NE+ M G D+V+Y +I C R EA LF M+ C+P +
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 119 CTLINGLGSEKRLSEALQF----FGQSKKRGFE--PEAPTYNAVVGAYCWSMRINDAYRM 172
TL+ GL ++ ALQ + + G + P +Y+ ++ C R ++A +
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
EM+ G+ P+ +Y ++H +G+ E+A +F M G +P V+T +++ MFC
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEM-LDVGIQPDVTTSGVLIDMFC 246
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+V A + + M RG + + YSTLI LC + ++ +A + F M +G RP
Sbjct: 247 KEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAI 306
Query: 293 LFSNLKQALRDEGMEETAVVLAQKI 317
+ L + L G A+ L Q++
Sbjct: 307 AYGTLMKGLCQTGKINIALHLHQEM 331
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 140/287 (48%), Gaps = 7/287 (2%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+ ++ ++ + LID LCK V A E+ + M +R DI +Y+ L++G + +
Sbjct: 48 YSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 107
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------EATNCKPSPHI 117
++ M+ G PD ++YG ++ C + A++L +EM CKP+
Sbjct: 108 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 167
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +I+GL ++R EA + F + K +G P+ +Y +++ +C S + A + +EM
Sbjct: 168 YSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEML 227
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI P+ T +++ K G+ EA + + M + G + TY +++ C ++
Sbjct: 228 DVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHR-GCILDIVTYSTLIKGLCMKHRI 286
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
A +++ MK G P Y TL+ LC K++ A QEML+
Sbjct: 287 SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLN 333
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 114/233 (48%), Gaps = 14/233 (6%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR---------EMEATNCKPSPHIFCTL 121
M+ G PD ++ I+IN C+ KR +E + ++ + +P L
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ L E ++ EA + +RG + TY+ ++ C RI++A + M+K G
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG-----TEPTVSTYEIVVRMFCYNAQ 236
P+ TY ++ L + G A + + M G +PT+ +Y I++ C + +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D A ++ EMKA+G++P + Y++LI+ CH K + A F EMLD+GI+P
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQP 233
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 160/320 (50%), Gaps = 6/320 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K G+++++ N L+D L K VE A F + K D +S+ ILL G+ + +
Sbjct: 226 IEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDS-IHVDFQSFNILLHGYCKARK 284
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM GF+P+VVSY I +C K + +F EM+ +CKP+ +
Sbjct: 285 LDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTI 344
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ LG K++++AL+ + K P+A Y++++ S R+ DA+ + ++M+K G
Sbjct: 345 FMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQG 404
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ E A + +RM +P + TY +++M C ++ +
Sbjct: 405 VSPDLLTYNTMITSACTHLEEENALKLLRRMEED-SCKPDIQTYAPLLKMCCRKKRIKVL 463
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + + Y L+ LC KL+ AC +F+EM+ G+ P + + L +
Sbjct: 464 KFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLIPRDRTYKMLVEE 523
Query: 301 LRDEGMEETAVVLAQKIDKL 320
L + E +KI KL
Sbjct: 524 LEQNNLTEA----KEKIQKL 539
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 146/271 (53%), Gaps = 2/271 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ CK+R ++ A+++ D+M K+ F P++ SYT +E + + K+ ++ ++ EM+
Sbjct: 272 FNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQ 331
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ +P+V++Y I ++A AK+ ++A+E++ M++ C P + +LI L RL
Sbjct: 332 EKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLK 391
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F KK+G P+ TYN ++ + C + +A +++ M + P+ +TY +L
Sbjct: 392 DAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLL 451
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ R + + M K + TY ++V C + ++++A ++EM +G+
Sbjct: 452 KMCCRKKRIKVLKFLLNHMF-KNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGL 510
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+P Y L+ L ++ L +A + Q+++
Sbjct: 511 IPRDRTYKMLVEEL-EQNNLTEAKEKIQKLM 540
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 113/277 (40%), Gaps = 39/277 (14%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
PD+ Y +M++ K++ EL +EME S ++ L +A++
Sbjct: 165 PDL--YDLMVDILGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGNFQDAVEA 222
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F +K G + N ++ A + AY E + I + ++++I+LH K
Sbjct: 223 FRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKD-SIHVDFQSFNILLHGYCK 281
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------------------------- 232
A + ++A + M ++ G +P V +Y + ++C
Sbjct: 282 ARKLDDARKIMDEMDKQ-GFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVI 340
Query: 233 ----------YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
QV+ A+ +++ MK+ +P YS+LI L +L DA F++M
Sbjct: 341 TYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDM 400
Query: 283 LDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
G+ P ++ + + EE A+ L +++++
Sbjct: 401 KKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEE 437
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 160/299 (53%), Gaps = 11/299 (3%)
Query: 6 LKQELPDF------NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
K+ +PDF N L+ TLC+ + + A+ V+ +K +F PD++++ ILL GW K
Sbjct: 169 FKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNILLSGW---K 224
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + EMK G +PDVV+Y +I+ +C + ++A +L +M + P +
Sbjct: 225 SSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYT 284
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+I GLG + +A + + K+ G P+ YNA + YC + R+ DA +++DEM K
Sbjct: 285 TIIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKK 344
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PN TY++ L A ++ +++RM G P + +++MF + +VDM
Sbjct: 345 GLSPNATTYNLFFRVLSLANDLGRSWELYERMLGN-GCLPNTQSCMFLIKMFKRHEKVDM 403
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AMR+W++M +G + L++ LC K+++A K EM++ G RP F +K
Sbjct: 404 AMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIK 462
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++G ++ +N I C +R + A ++ D+M K+ P+ +Y + +
Sbjct: 306 MKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAND 365
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
L E+Y M +G P+ S +I ++ D A+ L+ +M
Sbjct: 366 LGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 411
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 141/274 (51%), Gaps = 2/274 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G Q+L FN ++D LCKS+ VE+A E+F ++ R F D +Y ++L GW K
Sbjct: 146 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 204
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
EV +EM + G P++ +Y M+ A + A E F EM+ +C+ + T
Sbjct: 205 TPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 264
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++G G + A F + + G P TYNA++ C + +A M +EM + G
Sbjct: 265 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 324
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY++++ L AG + +RM + G EP TY +++R + ++V+ A
Sbjct: 325 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE-GCEPNFQTYNMMIRYYSECSEVEKA 383
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
+ ++++M + LP + Y+ LI+ + + +D
Sbjct: 384 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 417
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 2/228 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P ++ I+ + SA + D+AV+LF M C F T+++ L KR+ +A +
Sbjct: 118 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 177
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + R F + TYN ++ +C R ++ EM + GI PN TY+ +L +
Sbjct: 178 FRALRGR-FSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFR 236
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
AG+ A+ F M +K E V TY VV F ++ A ++DEM GVLP +
Sbjct: 237 AGQIRHAWEFFLEM-KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 295
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y+ +I LC +D +++A F+EM+ G P ++ L + L G
Sbjct: 296 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 343
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 144/316 (45%), Gaps = 2/316 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
F+ ID + + +M+ R P K++ I+ E + +++ M
Sbjct: 87 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 146
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G D+ S+ +++ C +KR ++A ELFR + + + ++NG KR
Sbjct: 147 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLIKRT 205
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ L+ + +RG P TYN ++ + + +I A+ EM+K + TY V
Sbjct: 206 PKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 265
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H AG + A +VF M R+ G P+V+TY ++++ C V+ A+ +++EM RG
Sbjct: 266 VHGFGVAGEIKRARNVFDEMIRE-GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 324
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+ LI L H + + Q M + G P Q ++ + + + E A+
Sbjct: 325 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 384
Query: 312 VLAQKIDKLRKTPLVD 327
L +K+ P +D
Sbjct: 385 GLFEKMGSGDCLPNLD 400
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ ++ FN LIDTLCK V A+++ M + PD+ +Y L+EG+ +L S
Sbjct: 255 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA 314
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G EPDV+SY ++IN + + +EA++L+ EM +P+ + +L+ G
Sbjct: 315 RELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 374
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ +A + F K G + TY + C + + +A ++ E++
Sbjct: 375 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 434
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ ++ L KAG+ E A+ +F+++S + G EP V TY I++ FC QVD A +
Sbjct: 435 IENLNCLIDGLCKAGKLETAWELFEKLSNE-GHEPNVVTYTIMIHGFCREGQVDKANVLI 493
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M+A G P + Y+TL+ +KL++ + M + P
Sbjct: 494 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 538
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 157/338 (46%), Gaps = 17/338 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N LI LC + A +F +M+K PD+ +Y L++G N+
Sbjct: 134 GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIA 193
Query: 65 NEVYREMKDD------GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI- 117
++++EM +D +P+V++Y I+++ C R DEA +LF EM+ P+ +
Sbjct: 194 LKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLD 253
Query: 118 ---------FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
F LI+ L E ++ EA + G + G P+ TYN+++ +C +N
Sbjct: 254 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNS 313
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A + M G P+ +Y+++++ K + EEA ++ M G P V TY+ ++
Sbjct: 314 ARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM-LLVGKRPNVITYDSLL 372
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+ +VD A +++ MKA G+ + Y ++ LC D L +A K F E+ +
Sbjct: 373 KGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFK 432
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+ + L L G ETA L +K+ P V
Sbjct: 433 LEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 470
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 141/299 (47%), Gaps = 17/299 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + N L++ LC + F + +R + P+I +Y L++G + +
Sbjct: 99 GLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEA 158
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------EATNCKPSPHIF 118
++ M+ G PDVV+YG +I C + A++L +EM NCKP+ +
Sbjct: 159 TRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITY 218
Query: 119 CTLINGLGSEKRLSEALQFFGQSKK----------RGFEPEAPTYNAVVGAYCWSMRIND 168
+++GL R EA Q F + K +G +P+ T+N ++ C ++ +
Sbjct: 219 NIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIE 278
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A +++ M + GI P+ TY+ ++ G A +F M K G EP V +Y +++
Sbjct: 279 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK-GCEPDVISYNVLI 337
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +V+ AM++++EM G P + Y +L+ + K+DDA K F M GI
Sbjct: 338 NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 396
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 17/286 (5%)
Query: 21 CKSRHVE--RAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
CK+ +V A F M + P + S+ LL G + K+ + +Y +M+ G
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
D + I++N C+ R E F + P+ + TLI GL E R+SEA + F
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM------RKCGIGPNTRTYDIVL 192
+ +K G P+ TY ++ C + IN A ++ EM + PN TY+I++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 193 HHLIKAGRTEEAYSVFKRMSRK---------PGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
L K GR +EA +F+ M + G +P + T+ +++ C +V A ++
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M G++P + Y++LI C L+ A + F M G P
Sbjct: 283 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEP 328
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 10/246 (4%)
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
S+ R LF A P+P I L + + AL FF + P
Sbjct: 12 SSIRNSNLSSLFTHSSAIP-SPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLS 70
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
++N ++ + + + ++MR G+ + T +I+L+ L R E ++ F +
Sbjct: 71 SFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGI 130
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
R+ G P + TY +++ C ++ A R++ M+ G P + Y TLI LC
Sbjct: 131 LRR-GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGN 189
Query: 272 LDDACKYFQEMLD------IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP- 324
++ A K QEML+ I +P ++ + L G E+ A L +++ P
Sbjct: 190 INIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPN 249
Query: 325 -LVDRG 329
++D+G
Sbjct: 250 EMLDQG 255
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 71/133 (53%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
K E+ + N LID LCK+ +E A E+F+K+ +P++ +YTI++ G+ ++ + N
Sbjct: 431 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 490
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ ++M+ +G PD+++Y ++ + + +E V+L M + P +++ L
Sbjct: 491 VLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 550
Query: 126 GSEKRLSEALQFF 138
+++ E L
Sbjct: 551 SKDEKYQECLHLL 563
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 101/214 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + ++ L+ + + V+ A+++F MK + +Y I L+G + L
Sbjct: 360 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 419
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ E+K F+ ++ + +I+ C A + + A ELF ++ +P+ + +I+G
Sbjct: 420 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 479
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E ++ +A + + G P+ TYN ++ + S ++ + +++ M + + P+
Sbjct: 480 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 539
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
T IV+ L K + +E + R + G +
Sbjct: 540 AITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVD 573
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 155/324 (47%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + +N L+ ++ V+ A+ + M++ P++ ++ ++ G +
Sbjct: 216 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGK 275
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ EM +G PD VSY ++ +C A EA+ +F EM P F +
Sbjct: 276 MEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 335
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ + L A+ Q ++RG + T+ A++ +C ++DA + M++C
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR 395
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ Y+ +++ GR +EA + M K G +P V TY ++ +C N A
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAK-GLKPDVVTYSTIISAYCKNCDTHSA 454
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M +GVLP YS+LI LC E +L DA F+ M+ +G++P +++L
Sbjct: 455 FELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 514
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
EG E+A+ L K+ K P
Sbjct: 515 HCKEGNVESALSLHDKMVKAGVLP 538
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 146/301 (48%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK L FN +++ +CK+ +E A++VFD+M + PD SY L+ G+ +
Sbjct: 251 MREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGC 310
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V+ EM G PDVV++ +I+ C A + AV L R+M + + F
Sbjct: 311 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTA 370
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + L +AL K+ +P YNA++ YC R+++A ++ EM G
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ K T A+ + ++M K G P TY ++R+ C ++ A
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK-GVLPDAITYSSLIRVLCGEKRLSDA 489
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ M G+ P Y++LI+ C E ++ A +M+ G+ P +S L
Sbjct: 490 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLING 549
Query: 301 L 301
L
Sbjct: 550 L 550
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 156/337 (46%), Gaps = 42/337 (12%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTIL---LEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+ A+ FD M P++ +Y IL L G G +K LS + R+M+ G P+VV+
Sbjct: 171 LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS---ILRDMRGAGCGPNVVT 227
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y ++ A A D A L M KP+ F +++NG+ ++ +A + F +
Sbjct: 228 YNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMV 287
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+ G P+ +YN +VG YC + ++A + EM + GI P+ T+ ++H + KAG E
Sbjct: 288 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 347
Query: 203 EAYSVFKRMSRKPGTE-----------------------------------PTVSTYEIV 227
A ++ ++M R+ G + P+V Y +
Sbjct: 348 RAVTLVRQM-RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNAL 406
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +C ++D A + EM+A+G+ P + YST+I++ C A + Q+ML+ G+
Sbjct: 407 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 466
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P +S+L + L E A VL + + KL P
Sbjct: 467 LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQP 503
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 147/312 (47%), Gaps = 16/312 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ F LI +CK+ ++ERA + +M++R + ++T L++G+ ++
Sbjct: 321 MTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 380
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L R MK +P VV Y +IN +C R DEA EL EMEA KP + T
Sbjct: 381 LDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 440
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ A + Q ++G P+A TY++++ C R++DA+ + M K G
Sbjct: 441 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLG 500
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ K G E A S+ +M K G P V TY +++ +A+ A
Sbjct: 501 LQPDEFTYTSLIDGHCKEGNVESALSLHDKMV-KAGVLPDVVTYSVLINGLSKSARAMEA 559
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN---------------SLCHEDKLDDACKYFQEMLDI 285
++ ++ +P Y L++ C + +++A K +Q MLD
Sbjct: 560 QQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDR 619
Query: 286 GIRPPGQLFSNL 297
G ++S L
Sbjct: 620 NWNLDGSVYSVL 631
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 148/331 (44%), Gaps = 14/331 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ F LID CK ++ A MK+ R P + Y L+ G+
Sbjct: 356 MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGR 415
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ EM+ G +PDVV+Y +I+A+C A EL ++M P + +
Sbjct: 416 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 475
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L EKRLS+A F K G +P+ TY +++ +C + A + D+M K G
Sbjct: 476 LIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAG 535
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSV-FKRMSRKPGTEPT-------------VSTYEI 226
+ P+ TY ++++ L K+ R EA + FK P T + +
Sbjct: 536 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLA 595
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+++ FC ++ A +++ M R +YS LI+ C + A + ++ML G
Sbjct: 596 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGG 655
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
P +L + L + GM A + Q++
Sbjct: 656 FAPNSTSTISLIRGLFENGMVVEADQVIQQL 686
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 123/249 (49%), Gaps = 2/249 (0%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAV 100
+ P + +Y +L +L S + M DG P+V +Y I++ A C EA+
Sbjct: 152 YVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 101 ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
+ R+M C P+ + TL+ + A + G ++ G +P T+N++V
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C + ++ DA ++ DEM + G+ P+ +Y+ ++ KAG + EA SVF M++K G P
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK-GIMPD 329
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V T+ ++ + C ++ A+ + +M+ RG+ ++ LI+ C + LDDA +
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389
Query: 281 EMLDIGIRP 289
M I+P
Sbjct: 390 GMKQCRIKP 398
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 114/266 (42%), Gaps = 19/266 (7%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K LPD ++ LI LC + + A +F M K PD +YT L++G ++ N+ S
Sbjct: 464 KGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVES 523
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-----ATNCKPSPHIF 118
++ +M G PDVV+Y ++IN + R EA +L ++ N K +
Sbjct: 524 ALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH 583
Query: 119 C----------TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
C L+ G + ++EA + + R + + Y+ ++ +C + +
Sbjct: 584 CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 643
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A +M + G PN+ + ++ L + G EA V +++ ++ + ++
Sbjct: 644 ALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEAS-KALI 702
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLP 254
+ VD + + M G+LP
Sbjct: 703 DLNLNEGNVDAVLDVLHGMAKDGLLP 728
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 89/236 (37%), Gaps = 50/236 (21%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ-- 58
M K GL+ + + LID CK +VE A + DKM K PD+ +Y++L+ G +
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555
Query: 59 -----------------------------------KNLLS----------MNE---VYRE 70
K++L+ MNE VY+
Sbjct: 556 AMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQS 615
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M D + D Y ++I+ HC A +A+ ++M P+ +LI GL
Sbjct: 616 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGM 675
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ EA Q Q +A A++ ++ ++ M K G+ P+ R
Sbjct: 676 VVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSPR 731
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P+V Y V+ + +A + A R +D M + GV P ++ Y+ L+ +LC +A
Sbjct: 151 GYVPSVLAYNAVL-LALSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++M G P ++ L A G
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAG 239
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 141/274 (51%), Gaps = 2/274 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G Q+L FN ++D LCKS+ VE+A E+F ++ R F D +Y ++L GW K
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKR 210
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
EV +EM + G P++ +Y M+ A + A E F EM+ +C+ + T
Sbjct: 211 TPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTT 270
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++G G + A F + + G P TYNA++ C + +A M +EM + G
Sbjct: 271 VVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY++++ L AG + +RM + G EP TY +++R + ++V+ A
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE-GCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
+ ++++M + LP + Y+ LI+ + + +D
Sbjct: 390 LGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 2/228 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P ++ I+ + SA + D+AV+LF M C F T+++ L KR+ +A +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + R F + TYN ++ +C R A ++ EM + GI PN TY+ +L +
Sbjct: 184 FRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
AG+ A+ F M +K E V TY VV F ++ A ++DEM GVLP +
Sbjct: 243 AGQIRHAWEFFLEM-KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVA 301
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y+ +I LC +D +++A F+EM+ G P ++ L + L G
Sbjct: 302 TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 145/316 (45%), Gaps = 2/316 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
F+ ID + + +M+ R P K++ I+ E + +++ M
Sbjct: 93 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G D+ S+ +++ C +KR ++A ELFR + + + ++NG KR
Sbjct: 153 HEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLIKRT 211
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+AL+ + +RG P TYN ++ + + +I A+ EM+K + TY V
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H AG + A +VF M R+ G P+V+TY ++++ C V+ A+ +++EM RG
Sbjct: 272 VHGFGVAGEIKRARNVFDEMIRE-GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG 330
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+ LI L H + + Q M + G P Q ++ + + + E A+
Sbjct: 331 YEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKAL 390
Query: 312 VLAQKIDKLRKTPLVD 327
L +K+ P +D
Sbjct: 391 GLFEKMGSGDCLPNLD 406
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 155/309 (50%), Gaps = 2/309 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GL ++ +N LID C+ ++ A + ++MK+ +PD+ SY L G ++ L
Sbjct: 35 KLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRKCLLQ 94
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTL 121
+++ EM G PDV SY I+++ + + +EA +FR++ E PS + +
Sbjct: 95 KSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVM 154
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
INGL ++ AL F ++RGF PE TYNA++ C + R+ DA R+++E G
Sbjct: 155 INGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGF 214
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY V+ + GR E+ + M RK T + Y VV +++ A
Sbjct: 215 EPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFA-YCTVVAALVKTGRIEEAD 273
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I ++M + G++P + Y+T+IN C + + D+A + E+ G++ + + L
Sbjct: 274 EIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGL 333
Query: 302 RDEGMEETA 310
+G E A
Sbjct: 334 CKDGNFEGA 342
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 153/312 (49%), Gaps = 2/312 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ +N L + ++++ ++FD+M + PD+ SY IL+ + +
Sbjct: 68 MKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGK 127
Query: 61 LLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
N V+R++ + G P + SY +MIN C + A+ LFR + P +
Sbjct: 128 PEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYN 187
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+INGL +RL++A + + GFEP A TY V+ R+ ++ EMR+
Sbjct: 188 AMINGLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRK 247
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G + Y V+ L+K GR EEA + ++M G P +++Y ++ +FC + D
Sbjct: 248 GFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSN-GLVPDLASYNTMINLFCRQGRFDE 306
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+R+ DE++ +G+ + ++ +I+ LC + + A K+ M +G F+++
Sbjct: 307 ALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILD 366
Query: 300 ALRDEGMEETAV 311
L G + AV
Sbjct: 367 CLGKAGDIDKAV 378
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 148/313 (47%), Gaps = 10/313 (3%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ +N +I+ LCK+ +V A +F +++R F P++ +Y ++ G + + L V
Sbjct: 147 SMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVL 206
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
E D GFEP+ ++Y ++ R ++ +E+ EM +CT++ L
Sbjct: 207 NEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKT 266
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
R+ EA + + G P+ +YN ++ +C R ++A R++DE+ K G+ + T+
Sbjct: 267 GRIEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTH 326
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
I++H L K G E A M+ G + + ++ +D A++++D M+
Sbjct: 327 TIIIHGLCKDGNFEGAEKHLDYMN-TLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSME 385
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+ Y++L+++LC K A K ++ G Q+ ++A+ D G+
Sbjct: 386 VKDSFT----YTSLLHNLCRAKKFRIASKLLVASIEDGF----QILRATQRAVID-GLTT 436
Query: 309 TAVVLAQKIDKLR 321
+ +V + KL+
Sbjct: 437 SGLVYEARKVKLK 449
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
I I+ C + + +A + + P + TLI+G + A + K+
Sbjct: 12 ITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNILNRMKEA 71
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+ +YN++ + + + DEM + GI P+ +Y+I++H + G+ EEA
Sbjct: 72 GINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEA 131
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
VF+ + + P++++Y +++ C N V+ A+ ++ ++ RG +P + Y+ +IN
Sbjct: 132 NGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMIN 191
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN-LKQALRDEGMEETAVVLAQ 315
LC +L DA + E D G P ++ +K R +E+ +L++
Sbjct: 192 GLCKARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSE 243
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 4/195 (2%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FG + + ++ + +E+ E+ +M+++ F D +Y ++ + +
Sbjct: 212 FGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIEE 271
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+E+ +M +G PD+ SY MIN C R+DEA+ L E+E K + +I+
Sbjct: 272 ADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIH 331
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL + A + GF +N+++ + I+ A ++ D M
Sbjct: 332 GLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEV----K 387
Query: 184 NTRTYDIVLHHLIKA 198
++ TY +LH+L +A
Sbjct: 388 DSFTYTSLLHNLCRA 402
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 159/313 (50%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI C+++ V+ A EVF M ++ + SYT L+ G + +
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEA 283
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ +M +D P V +Y ++I A + R EA+ LF EM+ C+P+ H + LI+G
Sbjct: 284 LKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDG 343
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ EA + + ++G P TYNA++ YC I+DA+ ++D M GPN
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TRTY+ ++ L K + +A ++ +M + P++ TY ++ C ++ A R+
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERK-LSPSLITYNSLIHGQCKVNDLESAYRLL 462
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M G++P YS I++LC E ++++A F + G++ +++ L
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522
Query: 305 GMEETAVVLAQKI 317
G + A L +++
Sbjct: 523 GKIDVAYSLLERM 535
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 155/322 (48%), Gaps = 8/322 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +++ CK +V A+ K+ + PD +YT L+ G + K + + EV+ M
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMP 256
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + + VSY +I+ C A R +EA++LF +M NC P+ + LI L R
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL F + K++G EP TY ++ C ++++A +M+ EM + G+ P+ TY+ ++
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G ++A+ + M P TY ++ C +V AM + ++M R +
Sbjct: 377 DGYCKEGMIDDAFEILDLMESN-SCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y++LI+ C + L+ A + M + G+ P +S L EG E A
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495
Query: 313 L-------AQKIDKLRKTPLVD 327
L K +++ T L+D
Sbjct: 496 LFDSVKAKGVKANEVIYTALID 517
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 167/362 (46%), Gaps = 42/362 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTIL---LEGWGQ 57
M + G ++ + LI LC++ + A ++F M + P +++YT+L L G G+
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE------------ 105
+ L++ + EMK+ G EP+V +Y ++I+ C + DEA ++ E
Sbjct: 315 KVEALNL---FNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT 371
Query: 106 -----------------------MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
ME+ +C P+ + LI GL ++++ +A+ +
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+R P TYN+++ C + AYR++ M + G+ P+ TY + + L K GR E
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA ++F + K G + Y ++ +C ++D+A + + M LP + Y+ L
Sbjct: 492 EAGTLFDSVKAK-GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
I LC E K+ +A +ML +G++P ++ L + +G + A+ + + L
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGY 610
Query: 323 TP 324
P
Sbjct: 611 QP 612
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 1/295 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+F K L +N ++ +L K ++ + V+ ++ + P+I ++ ++ G+ + N++
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ G PD +Y +I HC K D A E+F M C+ + + LI
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL R++EAL+ F + P TY ++ A S R +A + +EM++ G
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY +++ L K + +EA + MS K G P+V TY ++ +C +D A
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEK-GLIPSVVTYNALIDGYCKEGMIDDAFE 390
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I D M++ P Y+ LI LC + K+ A +ML+ + P +++L
Sbjct: 391 ILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 138/298 (46%), Gaps = 2/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LCK R V +A + +KM +R+ P + +Y L+ G + +L S + M
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G PD +Y + I+ C R +EA LF ++A K + I+ LI+G ++
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKID 526
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + P + TYN ++ C ++ +A ++ +M G+ P TY I++
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
++K G + A VF M G +P V TY + + ++ + +M G+
Sbjct: 587 GEMLKDGAFDHALKVFNHMV-SLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEET 309
LP + Y+ LI+ A + + M+D G +P + S L + L E M+ET
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 145/312 (46%), Gaps = 4/312 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMK---KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+I + C V EVF KM + +F P ++ Y +L + + M VY E+
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++ P++ ++ M+N +C EA ++ P + +LI G K +
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F ++G + +Y ++ C + RIN+A ++ +M + P RTY +++
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L +GR EA ++F M K G EP V TY +++ C ++D A ++ EM +G+
Sbjct: 307 YALSGSGRKVEALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P + Y+ LI+ C E +DDA + M P + ++ L L + A+
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 313 LAQKIDKLRKTP 324
L K+ + + +P
Sbjct: 426 LLNKMLERKLSP 437
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 154/345 (44%), Gaps = 19/345 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL + ++ IDTLCK VE A +FD +K + + YT L++G+ +
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M +D P+ +Y ++I C K+ EA L +M KP+ +
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + + AL+ F G++P+ TY A + AY + + ++ +M + G
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY------- 233
I P+ TY +++ + G T A+ K M G +P++ I+++ +
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV-DTGCKPSLYIVSILIKNLSHENRMKET 703
Query: 234 -----------NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ ++A++++++M G + +Y LI C +++L++A M
Sbjct: 704 RSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 763
Query: 283 LDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
+ G+ P ++++L G+ AV L + + PL++
Sbjct: 764 KERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLE 808
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 126/319 (39%), Gaps = 54/319 (16%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + + LI + K + A +VF+ M + PD+ +YT L + Q
Sbjct: 570 MLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGM 629
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGI--------------------MINAHC--------- 91
L +++V +M ++G PD+V+Y + M++ C
Sbjct: 630 LEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSI 689
Query: 92 ------------------------SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ Y+ A++LF +M C I+ LI G
Sbjct: 690 LIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 749
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
++RL EA K+RG P YN+++ C +A R++D M + G+ P +
Sbjct: 750 QERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLES 809
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y +++ L G E+A +VF + G +++++ VD + D M
Sbjct: 810 YKLLVCGLYIEGSNEKAKAVFHGL-LSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIM 868
Query: 248 KARGVLPVMHMYSTLINSL 266
+ +G P YS LI L
Sbjct: 869 EEKGCQPNPLTYSLLIEGL 887
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 149/305 (48%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID LCK + A+ +F +MK+ PD+ ++ L++G+G+ L + ++ EM+
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + DVV+Y +IN C R + A F M+ + F T ++ E +
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ F Q + RG TY ++ C + R++DA ++DEM + G+ N TY +++
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K + EA V RM K G Y ++ N + A+ + EMK +G+
Sbjct: 371 DGLCKERKVAEAEDVL-RMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ +Y LI LC+ KLD+A +M + G+ P +++ + A G A+
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489
Query: 313 LAQKI 317
+ QKI
Sbjct: 490 MLQKI 494
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 155/317 (48%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + F+ +D CK V A ++F +M+ R + +YT L++G +
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM G +VV+Y ++++ C ++ EA ++ R ME + + ++ T
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G K +AL + K +G E + Y A++ C ++++A ++ +M + G
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++ K+G+ EA ++ +++ G +P V TY ++ C +D A
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKI-LDSGFQPNVITYCALIDGLCKAGSIDEA 522
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +++M+ G+ P + Y+ L++ LC L++A + F EM+ G+ +++ L
Sbjct: 523 ISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 582
Query: 301 LRDEGMEETAVVLAQKI 317
+G A L K+
Sbjct: 583 YLKQGNLHDAFALKAKM 599
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 1/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + L+D LCK R V A++V M+K + YT L+ G KN
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EMK+ G E D+ YG +I C+ + DEA L +M+ + +P+ I+ T
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTT 473
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ ++ EA+ + GF+P TY A++ C + I++A ++MR G
Sbjct: 474 MMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLG 533
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN + Y ++ L K G EA +F M K G Y ++ + + A
Sbjct: 534 LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHK-GMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M G+ + Y+ I+ C+ + + +A + F EM+ GI P +++ L
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 301 LRDEGMEETAVVLAQKIDKL 320
+ G E A+ L +++++
Sbjct: 653 YQKLGNLEEAISLQDEMERV 672
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 166 INDAYRMMDEMRKCGIGPNTR-------------------------------TYDIVLHH 194
++DA R + +R+ + PNTR T++IV+
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDF 197
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K G EA S+F RM ++ G P V T+ ++ + ++D ++ +EM+ G
Sbjct: 198 LCKEGELAEARSLFSRM-KEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKA 256
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ Y+ LIN C +++ A YF M G+ FS A EG+ A+ L
Sbjct: 257 DVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKL 315
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ ++ FN LIDTLCK V A+++ M + PD+ +Y L+EG+ +L S
Sbjct: 280 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA 339
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G EPDV+SY ++IN + + +EA++L+ EM +P+ + +L+ G
Sbjct: 340 RELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 399
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ +A + F K G + TY + C + + +A ++ E++
Sbjct: 400 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 459
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ ++ L KAG+ E A+ +F+++S + G EP V TY I++ FC QVD A +
Sbjct: 460 IENLNCLIDGLCKAGKLETAWELFEKLSNE-GHEPNVVTYTIMIHGFCREGQVDKANVLI 518
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M+A G P + Y+TL+ +KL++ + M + P
Sbjct: 519 QKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 563
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 158/324 (48%), Gaps = 17/324 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + N L++ LC + F + +R + P+I +Y L++G + +
Sbjct: 99 GLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEA 158
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------EATNCKPSPHIF 118
++ M+ G PDVV+YG +I C + A++L +EM NCKP+ +
Sbjct: 159 TRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITY 218
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+++GL R EA Q F + K +G P +YN+++ +C + + ++ R++DEM
Sbjct: 219 NIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLD 278
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P+ T+++++ L K G+ EA + M + G P + TY ++ FC ++
Sbjct: 279 QGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI-ESGIVPDLVTYNSLIEGFCMVGDLN 337
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++ M ++G P + Y+ LIN K+++A K + EML +G RP + +L
Sbjct: 338 SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLL 397
Query: 299 QALRDEGMEETAVVLAQKIDKLRK 322
+ + LA K+D +K
Sbjct: 398 K----------GIFLAGKVDDAKK 411
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 137/277 (49%), Gaps = 9/277 (3%)
Query: 21 CKSRHVE--RAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
CK+ +V A F M + P + S+ LL G + K+ + +Y +M+ G
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
D + I++N C+ R E F + P+ + TLI GL E R+SEA + F
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM------RKCGIGPNTRTYDIVL 192
+ +K G P+ TY ++ C + IN A ++ EM + PN TY+I++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR +EA +F+ M + G P++ +Y ++ FC + + + R+ DEM +G+
Sbjct: 223 DGLCKVGREDEAKQLFEEM-KTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGL 281
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P M ++ LI++LC E K+ +A K M++ GI P
Sbjct: 282 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVP 318
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 7/332 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERA----QEVFDKMKKRRFD--PDIKSYTILLEG 54
M K G ++ + LI LC + ++ A QE+ + + + + P++ +Y I+++G
Sbjct: 165 MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ +++ EMK G P ++SY +I+ C A +++E+ L EM +P
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPD 284
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
F LI+ L E ++ EA + G + G P+ TYN+++ +C +N A +
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M G P+ +Y+++++ K + EEA ++ M G P V TY+ +++
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM-LLVGKRPNVITYDSLLKGIFLA 403
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+VD A +++ MKA G+ + Y ++ LC D L +A K F E+ + +
Sbjct: 404 GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 463
Query: 295 SNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+ L L G ETA L +K+ P V
Sbjct: 464 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 495
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 2/193 (1%)
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
S+ R LF A P+P I L + + AL FF + P
Sbjct: 12 SSIRNSNLSSLFTHSSAIP-SPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLS 70
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
++N ++ + + + ++MR G+ + T +I+L+ L R E ++ F +
Sbjct: 71 SFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGI 130
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
R+ G P + TY +++ C ++ A R++ M+ G P + Y TLI LC
Sbjct: 131 LRR-GYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGN 189
Query: 272 LDDACKYFQEMLD 284
++ A K QEML+
Sbjct: 190 INIALKLHQEMLN 202
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 71/133 (53%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
K E+ + N LID LCK+ +E A E+F+K+ +P++ +YTI++ G+ ++ + N
Sbjct: 456 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 515
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ ++M+ +G PD+++Y ++ + + +E V+L M + P +++ L
Sbjct: 516 VLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 575
Query: 126 GSEKRLSEALQFF 138
+++ E L
Sbjct: 576 SKDEKYQECLHLL 588
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 101/214 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + ++ L+ + + V+ A+++F MK + +Y I L+G + L
Sbjct: 385 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEA 444
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ E+K F+ ++ + +I+ C A + + A ELF ++ +P+ + +I+G
Sbjct: 445 MKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHG 504
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E ++ +A + + G P+ TYN ++ + S ++ + +++ M + + P+
Sbjct: 505 FCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPD 564
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
T IV+ L K + +E + R + G +
Sbjct: 565 AITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVD 598
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 155/296 (52%), Gaps = 1/296 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN +I +C+ + ++A E+ ++M + PD ++ IL++G + K + +++ R +
Sbjct: 220 SFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRL 279
Query: 72 KDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ DG P+VV+Y +I+ +C A R ++A+ ++ +M + +P+ + LING G
Sbjct: 280 QRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALD 339
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ A++ + Q R P+ T+++++ YC +++DA R+ EM + I PN T+ I
Sbjct: 340 MESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSI 399
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++H L K R+ EA + ++ + P Y V+ + C QV+ A I +M+ +
Sbjct: 400 IIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEK 459
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
G P + Y+ LI C + ++ +A F +M++ G RP ++ + GM
Sbjct: 460 GCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGM 515
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 127/256 (49%), Gaps = 3/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQK 59
M +FG + N L+D LC+++ V R ++ ++++ P++ +YT ++ G+ +
Sbjct: 244 MTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAG 303
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ VY +M + G P+ V+Y ++IN + A + AV ++R++ C P F
Sbjct: 304 RMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFS 363
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-K 178
+LI+G +L +A++ + + + +P T++ ++ + C R +A + E+ +
Sbjct: 364 SLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMR 423
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P T Y+ V+ L K G+ EEA + M K G P TY I++ C ++
Sbjct: 424 ADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEK-GCHPDKYTYTILIIGHCMKGRIP 482
Query: 239 MAMRIWDEMKARGVLP 254
A+ ++ +M G P
Sbjct: 483 EAITLFHKMVETGCRP 498
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 139/293 (47%), Gaps = 4/293 (1%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
++ +I LC+S A ++FD+M + + PD ++ + L + + +
Sbjct: 113 SYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLTK 172
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE-MEATNCKPSPHIFCTLINGLGSEK 129
G + +Y ++N + R +AV LF ++ P F +I G+
Sbjct: 173 ASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVG 232
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-PNTRTY 188
+AL+ + + G P+ T+N +V C + ++N + ++ +++ G+ PN TY
Sbjct: 233 NFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTY 292
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
V+ KAGR E+A SV+ M + GT P TY +++ + ++ A+R++ ++
Sbjct: 293 TSVISGYCKAGRMEDALSVYNDM-LESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLI 351
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R P + +S+LI+ C +LDDA + ++EM I+P FS + +L
Sbjct: 352 LRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSL 404
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LI+ K+ +E A ++ ++ RR PD+ +++ L++G+ +
Sbjct: 315 MLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQ 374
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFC 119
L +++EM +P+V ++ I+I++ C R EA+ RE+ + P I+
Sbjct: 375 LDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYN 434
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L ++ EA +++G P+ TY ++ +C RI +A + +M +
Sbjct: 435 PVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVET 494
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+ T + + ++KAG E
Sbjct: 495 GCRPDKITVNSFISCVLKAGMPNEV 519
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 110/257 (42%), Gaps = 37/257 (14%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREME---------------ATNCKPS-------- 114
P SY +I C + R+ +A++LF +M A +C +
Sbjct: 109 PSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVT 168
Query: 115 -------------PHIFCTLINGLGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAY 160
P+ + L+N L + R +A+ F + G + P+ ++N V+
Sbjct: 169 LLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGV 228
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C A +++ M + G P+T T++I++ L +A + + + +R+ R P
Sbjct: 229 CRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPN 288
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V TY V+ +C +++ A+ ++++M G P Y+ LIN ++ A + ++
Sbjct: 289 VVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYR 348
Query: 281 EMLDIGIRPPGQLFSNL 297
+++ P FS+L
Sbjct: 349 QLILRRCPPDVVTFSSL 365
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 148/312 (47%), Gaps = 36/312 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI LCK + RA ++ +M K PD +Y L++G QQ + E+ EM+
Sbjct: 386 YDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMR 445
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS------------------ 114
+ G P+V SYGIMIN C EA L EM + KP+
Sbjct: 446 NSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNIS 505
Query: 115 ---------------PHIFC--TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
P +FC +LI GL + R+ EA +++ Q +KRG P+ TY+ ++
Sbjct: 506 LACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLI 565
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + + A +++ +M G+ PN TY +L K+ E+ S+ + M G
Sbjct: 566 HGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM-LGSGD 624
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P Y IV+R + +++A + E++ G++P +H+YS+LI+ LC ++ A
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684
Query: 278 YFQEMLDIGIRP 289
EM G+ P
Sbjct: 685 LLDEMAKEGLEP 696
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 152/316 (48%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ ++ ++ I+ CK+R + A++VF++M++R + +Y +++ G +
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM D G PD +YG ++N C R EA L EM + KP+ ++ T
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G E + +EA + G +P Y+ ++ C ++ A +++ EM K G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T TY+ ++ + + A+ + M R G P V +Y I++ C N + A
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEM-RNSGILPNVYSYGIMINGLCQNGESKEA 472
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +EM + G+ P MY+ LI E + AC+ ++M + P +++L +
Sbjct: 473 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKG 532
Query: 301 LRDEG-MEETAVVLAQ 315
L G MEE AQ
Sbjct: 533 LSTVGRMEEAEEYYAQ 548
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 147/344 (42%), Gaps = 36/344 (10%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+DT K+ V A +V M P + LL+ + + + ++ M+ G
Sbjct: 179 LVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAG 238
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PDV +Y I AHC A+ +D A ++F EM +C + + +I+GL + EA
Sbjct: 239 ILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 298
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + G P+A TY A++ C R+ +A ++DEM G+ PN Y ++
Sbjct: 299 GFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGF 358
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV------------------ 237
+K G+T EA+ + K M G +P Y+ ++R C Q+
Sbjct: 359 MKEGKTAEAFDILKEMI-SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417
Query: 238 -----------------DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
D A + +EM+ G+LP ++ Y +IN LC + +A +
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLE 477
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM+ G++P +++ L EG A +K+ K P
Sbjct: 478 EMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHP 521
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 141/292 (48%), Gaps = 2/292 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL + ++ LI CK+ ++E+A ++ +M P+ +YT LLEG+ + +
Sbjct: 549 VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSND 608
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ + + M G +PD YGI+I ++ + A + E+E P HI+ +
Sbjct: 609 YEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS 668
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + +A+ + K G EP YNA++ +C S I+ A + D + G
Sbjct: 669 LISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG 728
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ K G +A+ ++K M + G P Y ++ A ++ A
Sbjct: 729 LVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDR-GIAPDAFVYNVLATGCSDAADLEQA 787
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+ + +EM RG V +++TL++ C KL + K M+D I P Q
Sbjct: 788 LFLTEEMFNRGYANV-SLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQ 838
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 148/320 (46%), Gaps = 36/320 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I LC+S VE A ++M PD +Y L+ G + L + EM
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P++V YG +++ + EA ++ +EM + +P+ ++ LI GL +L
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + K G P+ TYN ++ + + A+ +++EMR GI PN +Y I++
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMI 460
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV------------------------ 228
+ L + G ++EA ++ + M + G +P Y ++
Sbjct: 461 NGLCQNGESKEAGNLLEEMISE-GLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV 519
Query: 229 --RMFCYNAQV---------DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+FCYN+ + + A + +++ RG++P YS LI+ C L+ A +
Sbjct: 520 HPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQ 579
Query: 278 YFQEMLDIGIRPPGQLFSNL 297
++ML+ G++P +++L
Sbjct: 580 LLRQMLNSGLKPNADTYTDL 599
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 148/320 (46%), Gaps = 3/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K + +L +N LI L +E A+E + +++KR PD +Y+ L+ G+ + N
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGN 573
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ R+M + G +P+ +Y ++ + + Y++ + + M + KP HI+
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L + + A + +K G P+ Y++++ C + A ++DEM K G
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG 693
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P Y+ ++ ++G A +VF + K G P TY ++ C N + A
Sbjct: 694 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAK-GLVPNCVTYTALIDGNCKNGDITDA 752
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM RG+ P +Y+ L L+ A +EM + G LF+ L
Sbjct: 753 FDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANV-SLFNTLVHG 811
Query: 301 LRDEG-MEETAVVLAQKIDK 319
G ++ET +L +D+
Sbjct: 812 FCKRGKLQETEKLLHVMMDR 831
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 108/227 (47%), Gaps = 1/227 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K GL +L ++ LI LCK +E+A + D+M K +P I Y L++G+ + +
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ + G P+ V+Y +I+ +C +A +L++EM P ++
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNV 773
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L G L +AL + RG+ +N +V +C ++ + +++ M
Sbjct: 774 LATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDRE 832
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
I PN +T + V+ KAG+ EA+ VF + +K ++ + ++
Sbjct: 833 IVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLL 879
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 149/305 (48%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID LCK + A+ +F +MK+ PD+ ++ L++G+G+ L + ++ EM+
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + DVV+Y +IN C R + A F M+ + F T ++ E +
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ F Q + RG TY ++ C + R++DA ++DEM + G+ N TY +++
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K + EA V RM K G Y ++ N + A+ + EMK +G+
Sbjct: 371 DGLCKERKVAEAEDVL-RMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ +Y LI LC+ KLD+A +M + G+ P +++ + A G A+
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489
Query: 313 LAQKI 317
+ QKI
Sbjct: 490 MLQKI 494
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 139/288 (48%), Gaps = 14/288 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + F+ +D CK V A ++F +M+ R + +YT L++G +
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM G +VV+Y ++++ C ++ EA ++ R ME + + ++ T
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G K +AL + K +G E + Y A++ C ++++A ++ +M + G
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++ K+G+ EA ++ +++ G +P N ++ A
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKI-LDSGFQPN-------------NGCLNEA 509
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+++++EM +G+ +Y+ L++ + L DA +M+D G++
Sbjct: 510 VQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 557
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 103/250 (41%), Gaps = 23/250 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + L+D LCK R V A++V M+K + YT L+ G KN
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EMK+ G E D+ YG +I C+ + DEA L +M+ + +P+ I+ T
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTT 473
Query: 121 LINGLGSEKR----------------------LSEALQFFGQSKKRGFEPEAPTYNAVVG 158
+++ + L+EA+Q F + +G + Y A++
Sbjct: 474 MMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLD 533
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
Y ++DA+ + +M G+ + Y + EA VF M G
Sbjct: 534 GYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGH-GIA 592
Query: 219 PTVSTYEIVV 228
P + Y ++
Sbjct: 593 PDRAVYNCLI 602
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 166 INDAYRMMDEMRKCGIGPNTR-------------------------------TYDIVLHH 194
++DA R + +R+ + PNTR T++IV+
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDF 197
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K G EA S+F RM ++ G P V T+ ++ + ++D ++ +EM+ G
Sbjct: 198 LCKEGELAEARSLFSRM-KEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKA 256
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ Y+ LIN C +++ A YF M G+ FS A EG+ A+ L
Sbjct: 257 DVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKL 315
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+ A ++F++M + D YT LL+G+ +Q NL + +M D G + D+ Y
Sbjct: 506 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 565
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
I+ C+ EA E+F EM P ++ LI
Sbjct: 566 FISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLIT 603
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 149/281 (53%), Gaps = 1/281 (0%)
Query: 21 CKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDV 80
CK ++A ++ D+M+ + PDI +Y +++ G Q+ + E + + G EP+
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
VSY I++ C+A+R+++A EL EM C P+ F LI+ L + + AL+ Q
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
K G P + +YN ++ A+C +++ A +D M G P+ +Y+ +L L ++G
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
+ A + ++ K G P + +Y V+ + A+ + +EM ++G+ P + YS
Sbjct: 183 VDVAVELLHQLKDK-GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 241
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
T+ LC ED+++DA + F ++ D+GIRP L++ + L
Sbjct: 242 TIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 282
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 149/306 (48%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +++ +C+ V+ A E + +P+ SY I+L+G +
Sbjct: 22 GCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDA 81
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ EM G P+VV++ ++I+ C + A+E+ ++ C P+ + L++
Sbjct: 82 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 141
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+K++ +A+ F RG P+ +YN ++ A C S ++ A ++ +++ G P
Sbjct: 142 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 201
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ V+ L KAG+T+EA + M K G +P + TY + C +++ A+R +
Sbjct: 202 LISYNTVIDGLTKAGKTKEALELLNEMVSK-GLQPDIITYSTIAAGLCREDRIEDAIRAF 260
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+++ G+ P +Y+ +I LC + A F M+ G P ++ L + L E
Sbjct: 261 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYE 320
Query: 305 GMEETA 310
G+ + A
Sbjct: 321 GLIKEA 326
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI LC+ VE A EV +++ K P+ SY LL + +QK
Sbjct: 88 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 147
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G PD+VSY ++ A C + D AVEL +++ C P + T
Sbjct: 148 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 207
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + EAL+ + +G +P+ TY+ + C RI DA R +++ G
Sbjct: 208 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 267
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PNT Y+ ++ L K T A +F M G P STY I++ Y + A
Sbjct: 268 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN-GCMPNESTYTILIEGLAYEGLIKEA 326
Query: 241 MRIWDEMKARGVL 253
+ DE+ +RGV+
Sbjct: 327 RDLLDELCSRGVV 339
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 137/271 (50%), Gaps = 7/271 (2%)
Query: 54 GWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
G+ Q LL EM+D G PD+V+Y +++N C R D+A+E + + + C+P
Sbjct: 7 GYKQAMKLLD------EMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ + ++ GL + +R +A + G+ ++G P T+N ++ C + A ++
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+++ K G PN+ +Y+ +LH K + ++A + M + G P + +Y ++ C
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR-GCYPDIVSYNTLLTALCR 179
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+ +VD+A+ + ++K +G PV+ Y+T+I+ L K +A + EM+ G++P
Sbjct: 180 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 239
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+S + L E E A+ K+ + P
Sbjct: 240 YSTIAAGLCREDRIEDAIRAFGKVQDMGIRP 270
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 112/229 (48%), Gaps = 1/229 (0%)
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
A C Y +A++L EM C P + ++NG+ E R+ +A++F G EP
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+YN V+ C + R DA +M EM + G PN T+++++ L + G E A V
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+++ K G P +Y ++ FC ++D AM D M +RG P + Y+TL+ +LC
Sbjct: 121 EQIP-KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 179
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
++D A + ++ D G P ++ + L G + A+ L ++
Sbjct: 180 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 228
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 146/305 (47%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI LC++ E+ E +M + PD++ Y +++G + +
Sbjct: 239 MVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 298
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
N++ M G +P+VV Y ++ CSA+R++EA +L EM +C F
Sbjct: 299 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 358
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ + ++ Q + G P+ TY V+ +C +++A ++ M CG
Sbjct: 359 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT +Y IVL L +A R +A + M ++ G P T+ ++ C V+ A
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQ-GCLPNPVTFNTLINFMCKKGLVEQA 477
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +M G P + YST+I+ L K ++A + M++ GI P ++S++ A
Sbjct: 478 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASA 537
Query: 301 LRDEG 305
L EG
Sbjct: 538 LSREG 542
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 145/306 (47%), Gaps = 1/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N ++ LC + E A+++ +M + D ++ IL++ + Q
Sbjct: 309 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 368
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M + G PDV++Y +IN C DEAV L + M A CKP+ +
Sbjct: 369 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 428
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL +R +A + ++G P T+N ++ C + A ++ +M G
Sbjct: 429 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG 488
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+TEEA + M K G P Y + + D
Sbjct: 489 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINK-GITPNTIIYSSMASALSREGRTDKI 547
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D ++ V +Y+ +I+SLC + D A +F M+ G P ++ L +
Sbjct: 548 IQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRG 607
Query: 301 LRDEGM 306
L EG+
Sbjct: 608 LASEGL 613
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G P + +++ C+ A + + D + +++ +Q +
Sbjct: 138 GCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEG 197
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ R++ G EPD+VSY ++ C AKR+D+ EL EM C P+ F TLI
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAY 257
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + Q + G P+ Y ++ C A ++ M G+ PN
Sbjct: 258 LCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPN 317
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ VL L A R EEA + M ++ V T+ I+V FC N VD + +
Sbjct: 318 VVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDV-TFNILVDFFCQNGLVDRVIELL 376
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++M G +P + Y+T+IN C E +D+A + M G +P
Sbjct: 377 EQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 1/250 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + +I+ CK V+ A + M P+ SYTI+L+G + +
Sbjct: 379 MLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAER 438
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ M G P+ V++ +IN C ++A+EL ++M C P + T
Sbjct: 439 WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYST 498
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GLG + EAL+ +G P Y+++ A R + +M D ++
Sbjct: 499 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDAT 558
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + Y+ V+ L K T+ A F M G P STY I++R V A
Sbjct: 559 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSN-GCMPNESTYTILIRGLASEGLVREA 617
Query: 241 MRIWDEMKAR 250
+ E+ +R
Sbjct: 618 QDLLSELCSR 627
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 1/161 (0%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P A TY +V + C I DA ++DEM G ++L + G A
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+ + K G +VV C VD + + ++ + G P + Y+ ++ LC
Sbjct: 166 LQVLHAK-GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+ DD + EM+ +G P F+ L L G+ E
Sbjct: 225 MAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFE 265
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 7/171 (4%)
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
+A++ + C + R DA R +D G Y+ ++ +AG+ A + +
Sbjct: 48 SALIRSLCAAGRTADAARALDTA---GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP- 103
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
P TY +VR C + A+ + DEM RG M ++ + C
Sbjct: 104 ---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
A + Q + G + + A+ ++G + V L +K+ P
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEP 211
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 163/361 (45%), Gaps = 49/361 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-----W 55
M G K L +F LID LCK +++A E+ ++M + + P++ ++T L++G W
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
++ L + V + D ++P+V +Y MI +C + + A LF M+ P+
Sbjct: 338 TEKAFRLFLKLV----RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 393
Query: 116 HIFCTLING---LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ + TLING GS R E + G GF P TYNA + + C R +AY +
Sbjct: 394 NTYTTLINGHCKAGSFGRAYELMNLMGD---EGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------------- 215
+++ CG+ + TY I++ K +A + F RM++
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 216 -----------------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
G PT TY ++ +C +D+A++ + MK G +P
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT 570
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
Y +LI+ LC + +D+ACK ++ M+D G+ PP L A++L + +D
Sbjct: 571 YGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLD 630
Query: 319 K 319
K
Sbjct: 631 K 631
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 2/300 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL N +++ + +E A+ VFD+M R PD SY +++ G +
Sbjct: 173 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 232
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M GF PD + +++ A C + A+ FR+M KP+ F +
Sbjct: 233 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 292
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM-MDEMRKC 179
LI+GL + + +A + + + G++P T+ A++ C A+R+ + +R
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 352
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
PN TY ++ K + A +F RM ++ G P V+TY ++ C
Sbjct: 353 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM-KEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + + M G +P ++ Y+ I+SLC + + +A + + G+ G ++ L Q
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 142/348 (40%), Gaps = 39/348 (11%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + + +I CK + RA+ +F +MK++ P++ +YT L+ G + + E
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M D+GF P++ +Y I++ C R EA EL + + + + LI
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 474
Query: 127 SEKRLSEALQFFGQSKKRGFE-----------------------------------PEAP 151
+ +++AL FF + K GFE P
Sbjct: 475 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 534
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
TY +++ YC I+ A + M++ G P++ TY ++ L K +EA +++ M
Sbjct: 535 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ + P V+ + +C AM + + + + + + TL+ LC E K
Sbjct: 595 IDRGLSPPEVTRVTLAYE-YCKRNDSANAMILLEPLDKKLWIRTVR---TLVRKLCSEKK 650
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ A +FQ++L+ + A + G L ++I +
Sbjct: 651 VGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISR 698
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M++ G P ++ ++ + A +F EM P + ++ G +
Sbjct: 172 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 231
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC---------WSMR--------------- 165
++ EA ++ +RGF P+ T ++ A C W R
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 166 -----------INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
I A+ M++EM + G PN T+ ++ L K G TE+A+ +F ++ R
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
+P V TY ++ +C +++ A ++ MK +G+ P ++ Y+TLIN C
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 275 ACKYFQEMLDIGIRP 289
A + M D G P
Sbjct: 412 AYELMNLMGDEGFMP 426
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 110/243 (45%), Gaps = 4/243 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N ID+LCK A E+ +K + D +YTIL++ +Q ++
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M GFE D+ I+I A C K+ E+ LF+ + + P+ + ++I+
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 542
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + AL++F K+ G P++ TY +++ C +++A ++ + M G+ P
Sbjct: 543 YCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPP 602
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T + + K + A + + + +K + T +VR C +V +A +
Sbjct: 603 EVTRVTLAYEYCKRNDSANAMILLEPLDKKLW----IRTVRTLVRKLCSEKKVGVAALFF 658
Query: 245 DEM 247
++
Sbjct: 659 QKL 661
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
R+N+A M+ +M+ G+ P++ T + VL ++ G E A +VF MS + G P S+Y
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR-GVVPDSSSY 220
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++V + ++ A R M RG +P + ++ +LC ++ A YF++M+D
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 285 IGIRPPGQLFSNLKQALRDEG 305
+G +P F++L L +G
Sbjct: 281 LGFKPNLINFTSLIDGLCKKG 301
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
RL+EA+ + +G P + T N V+ I A + DEM G+ P++ +Y
Sbjct: 162 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYK 221
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ + G+ +EA M ++ G P +T +++ C N V+ A+ + +M
Sbjct: 222 LMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G P + +++LI+ LC + + A + +EM+ G +P + L L G E
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 310 AVVLAQKI 317
A L K+
Sbjct: 341 AFRLFLKL 348
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L + + GR EA + M + G P+ T V+ + ++ A ++DEM R
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQ-GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 211
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
GV+P Y ++ + K+ +A ++ M+ G P + + AL + G+ A
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 311 VVLAQKIDKLRKTP 324
+ +K+ L P
Sbjct: 272 IWYFRKMIDLGFKP 285
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 162/317 (51%), Gaps = 11/317 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+DTLCK +++ A EVF+K +K RF P+++ YT+L+ GW + + REM
Sbjct: 177 FCFLLDTLCKYGYIKVAVEVFNK-RKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIREMD 235
Query: 73 DDGFEPDVVSYGIMINAHCS-AK-----RYDEAV----ELFREMEATNCKPSPHIFCTLI 122
+ G E +VV+Y ++++ C AK R++ + ++F EM +P F L+
Sbjct: 236 EMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSILL 295
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ + + ++ G P TY +V+ C RI+DA ++++M + G+
Sbjct: 296 HVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVS 355
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY+ E A +++++ ++ +P+V TY I++ MF + ++
Sbjct: 356 PNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNE 415
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
IW+++++ G P + Y+ L++ LC + K AC++F EM++ G+ P F L L
Sbjct: 416 IWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEMLYAGLI 475
Query: 303 DEGMEETAVVLAQKIDK 319
M T L +K+D+
Sbjct: 476 QSNMLRTWRRLKKKLDE 492
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 132/262 (50%), Gaps = 18/262 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCK----------SRHVERAQEVFDKMKKRRFDPDIKSYTI 50
MD+ G++ + +N L+D +C+ R + +A +VFD+M+++ +PD+ S++I
Sbjct: 234 MDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSI 293
Query: 51 LLEGWGQ-QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
LL + + K L+++++ + M++ G P V +Y ++ CS R D+A EL +M
Sbjct: 294 LLHVYSRAHKPQLTVDKL-KLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRN 352
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF-EPEAPTYNAVVGAYCWSMRIND 168
P+ + K AL+ + + ++ +P TYN ++G + R N
Sbjct: 353 GVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNI 412
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
+ +++R G GP+ +Y +++H L + + ++A F M K G P +T+E+
Sbjct: 413 VNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEK-GLLPQKATFEM-- 469
Query: 229 RMFCYNAQVDMAMRIWDEMKAR 250
++ Q +M +R W +K +
Sbjct: 470 -LYAGLIQSNM-LRTWRRLKKK 489
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 134 ALQFFGQSKKR-GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL FF S TYN ++ + + +++++ +M + + PN+ T+ I++
Sbjct: 86 ALSFFHYSLSLPSSSVNTTTYNLIIDILSKVRQFDVSWQLIIQMDQNNLQPNSHTFLILI 145
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
LI AG T +A F M + + ++ C + +A+ ++++ K R
Sbjct: 146 RRLISAGFTRQAIRAFDDMESFIAETVNQTHFCFLLDTLCKYGYIKVAVEVFNKRKFR-F 204
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL------KQALRDEGM 306
LP + +Y+ LI C ++D A ++ +EM ++GI ++ L + L+ EG
Sbjct: 205 LPNVRIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGR 264
Query: 307 EETAVVLAQKI-DKLRK 322
E ++ A K+ D++R+
Sbjct: 265 FERTIMKADKVFDEMRQ 281
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 159/313 (50%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI C+++ V+ A EVF M ++ + SYT L+ G + +
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEA 283
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ +M +D P V +Y ++I A + R EA+ LF EM+ C+P+ H + LI+G
Sbjct: 284 LKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDG 343
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ EA + + ++G P TYNA++ YC I+DA+ ++D M GPN
Sbjct: 344 LCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPN 403
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TRTY+ ++ L K + +A ++ +M + P++ TY ++ C ++ A R+
Sbjct: 404 TRTYNELICGLCKKRKVHKAMALLNKMLERK-LSPSLITYNSLIHGQCKVNDLESAYRLL 462
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M G++P YS I++LC E ++++A F + G++ +++ L
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522
Query: 305 GMEETAVVLAQKI 317
G + A L +++
Sbjct: 523 GKIDVAYSLLERM 535
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +++ CK +V A+ K+ + PD +YT L+ G + K + + EV+ M
Sbjct: 197 FNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMP 256
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + + VSY +I+ C A R +EA++LF +M NC P+ + LI L R
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKV 316
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL F + K++G EP TY ++ C ++++A +M+ EM + G+ P+ TY+ ++
Sbjct: 317 EALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G ++A+ + M P TY ++ C +V AM + ++M R +
Sbjct: 377 DGYCKEGMIDDAFEILDLMESN-SCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y++LI+ C + L+ A + M + G+ P +S L EG E A
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495
Query: 313 L 313
L
Sbjct: 496 L 496
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 163/349 (46%), Gaps = 42/349 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTIL---LEGWGQ 57
M + G ++ + LI LC++ + A ++F M + P +++YT+L L G G+
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE------------ 105
+ L++ + EMK+ G EP+V +Y ++I+ C + DEA ++ E
Sbjct: 315 KVEALNL---FNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVT 371
Query: 106 -----------------------MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
ME+ +C P+ + LI GL ++++ +A+ +
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKML 431
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+R P TYN+++ C + AYR++ M + G+ P+ TY + + L K GR E
Sbjct: 432 ERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA ++F + K G + Y ++ +C ++D+A + + M LP + Y+ L
Sbjct: 492 EAGTLFDSVKAK-GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVL 550
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
I LC E K+ +A +ML +G++P ++ L + +G + A+
Sbjct: 551 IEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 1/295 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+F K L +N ++ +L K ++ + V+ ++ + P+I ++ ++ G+ + N++
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ G PD +Y +I HC K D A E+F M C+ + + LI
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GL R++EAL+ F + P TY ++ A S R +A + +EM++ G
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY +++ L K + +EA + MS K G P+V TY ++ +C +D A
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEK-GLIPSVVTYNALIDGYCKEGMIDDAFE 390
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I D M++ P Y+ LI LC + K+ A +ML+ + P +++L
Sbjct: 391 ILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 138/298 (46%), Gaps = 2/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LCK R V +A + +KM +R+ P + +Y L+ G + +L S + M
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G PD +Y + I+ C R +EA LF ++A K + I+ LI+G ++
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKID 526
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + P + TYN ++ C ++ +A ++ +M G+ P TY I++
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
++K G + A VF M G +P V TY + + ++ + +M G+
Sbjct: 587 GEMLKDGAFDHALKVFNHMVSL-GYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEET 309
LP + Y+ LI+ A + + M+D G +P + S L + L E M+ET
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 145/312 (46%), Gaps = 4/312 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMK---KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+I + C V EVF KM + +F P ++ Y +L + + M VY E+
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++ P++ ++ M+N +C EA ++ P + +LI G K +
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F ++G + +Y ++ C + RIN+A ++ +M + P RTY +++
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L +GR EA ++F M K G EP V TY +++ C ++D A ++ EM +G+
Sbjct: 307 YALSGSGRKVEALNLFNEMKEK-GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGL 365
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P + Y+ LI+ C E +DDA + M P + ++ L L + A+
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMA 425
Query: 313 LAQKIDKLRKTP 324
L K+ + + +P
Sbjct: 426 LLNKMLERKLSP 437
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 154/356 (43%), Gaps = 30/356 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL + ++ IDTLCK VE A +FD +K + + YT L++G+ +
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGK 524
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M +D P+ +Y ++I C K+ EA L +M KP+ +
Sbjct: 525 IDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTI 584
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + + AL+ F G++P+ TY A + AY + + ++ +M + G
Sbjct: 585 LIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG 644
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY------- 233
I P+ TY +++ + G T A+ K M G +P++ I+++ +
Sbjct: 645 ILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV-DTGCKPSLYIVSILIKNLSHENRMKET 703
Query: 234 ----------------------NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ ++A++++++M G + +Y LI C +++
Sbjct: 704 RSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQER 763
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
L++A M + G+ P ++++L G+ AV L + + PL++
Sbjct: 764 LEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLE 819
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 137/335 (40%), Gaps = 30/335 (8%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + LID CK ++ A + ++M P+ +Y +L+EG ++K +
Sbjct: 504 GVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEA 563
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + +M G +P VV+Y I+I +D A+++F M + +P + ++
Sbjct: 564 SSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHA 623
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
S+ L E + + G P+ TY ++ Y + A+ + M G P+
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Query: 185 TRTYDIVLHHLIKAGRTEE-----------------------------AYSVFKRMSRKP 215
I++ +L R +E A +F++M
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEH- 742
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G VS Y ++ FC +++ A + MK RG+ P +Y++L++ C +A
Sbjct: 743 GCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEA 802
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ M++ G+ P + + L L EG E A
Sbjct: 803 VRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKA 837
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 95/237 (40%), Gaps = 29/237 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + ++ + + +E +V KM + PD+ +YT+L++G+ +
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR------------------------- 95
+ + M D G +P + I+I R
Sbjct: 665 THRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVW 724
Query: 96 ----YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
Y+ A++LF +M C I+ LI G ++RL EA K+RG P
Sbjct: 725 KTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 784
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
YN+++ C +A R++D M + G+ P +Y +++ L G E+A +VF
Sbjct: 785 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVF 841
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
K+ E A ++F+KM + D+ Y L+ G+ QQ+ L + MK+ G P
Sbjct: 725 KTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 784
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
Y +++ C Y EAV L M P + L+ GL E +A F
Sbjct: 785 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGL 844
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
G+ + + ++ +++ ++D M +
Sbjct: 845 LSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE 881
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D CK A + D M + P ++SY +L+ G + + V+ +
Sbjct: 786 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 845
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G+ D V++ ++I+ DE EL ME + I C + L +
Sbjct: 846 SCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTK 905
Query: 133 EALQ 136
AL+
Sbjct: 906 GALE 909
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 149/305 (48%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID LCK + A+ +F +MK+ PD+ ++ L++G+G+ L + ++ EM+
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + DVV+Y +IN C R + A F M+ + F T ++ E +
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ F Q + RG TY ++ C + R++DA ++DEM + G+ N TY +++
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K + EA V RM K G Y ++ N + A+ + EMK +G+
Sbjct: 371 DGLCKERKVAEAEDVL-RMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ +Y LI LC+ KLD+A +M + G+ P +++ + A G A+
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIA 489
Query: 313 LAQKI 317
+ QKI
Sbjct: 490 MLQKI 494
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 155/317 (48%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + F+ +D CK V A ++F +M+ R + +YT L++G +
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM G +VV+Y ++++ C ++ EA ++ R ME + + ++ T
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G K +AL + K +G E + Y A++ C ++++A ++ +M + G
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y ++ K+G+ EA ++ +++ G +P V TY ++ C +D A
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKI-LDSGFQPNVITYCALIDGLCKAGSIDEA 522
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +++M+ G+ P + Y+ L++ LC L++A + F EM+ G+ +++ L
Sbjct: 523 ISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 582
Query: 301 LRDEGMEETAVVLAQKI 317
+G A L K+
Sbjct: 583 YLKQGNLHDAFALKAKM 599
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 150/320 (46%), Gaps = 1/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + L+D LCK R V A++V M+K + YT L+ G KN
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EMK+ G E D+ YG +I C+ + DEA L +M+ + +P+ I+ T
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTT 473
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ ++ EA+ + GF+P TY A++ C + I++A ++MR G
Sbjct: 474 MMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLG 533
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN + Y ++ L K G EA +F M K G Y ++ + + A
Sbjct: 534 LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHK-GMSLDKVVYTALLDGYLKQGNLHDA 592
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M G+ + Y+ I+ C+ + + +A + F EM+ GI P +++ L
Sbjct: 593 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISK 652
Query: 301 LRDEGMEETAVVLAQKIDKL 320
+ G E A+ L +++++
Sbjct: 653 YQKLGNLEEAISLQDEMERV 672
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 166 INDAYRMMDEMRKCGIGPNTR-------------------------------TYDIVLHH 194
++DA R + +R+ + PNTR T++IV+
Sbjct: 138 LDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDF 197
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K G EA S+F RM ++ G P V T+ ++ + ++D ++ +EM+ G
Sbjct: 198 LCKEGELAEARSLFSRM-KEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKA 256
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ Y+ LIN C +++ A YF M G+ FS A EG+ A+ L
Sbjct: 257 DVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKL 315
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 163/361 (45%), Gaps = 49/361 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-----W 55
M G K L +F LID LCK +++A E+ ++M + + P++ ++T L++G W
Sbjct: 879 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 938
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
++ L + V + D ++P+V +Y MI +C + + A LF M+ P+
Sbjct: 939 TEKAFRLFLKLV----RSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 994
Query: 116 HIFCTLING---LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ + TLING GS R E + G GF P TYNA + + C R +AY +
Sbjct: 995 NTYTTLINGHCKAGSFGRAYELMNLMGD---EGFMPNIYTYNAAIDSLCKKSRAPEAYEL 1051
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------------- 215
+++ CG+ + TY I++ K +A + F RM++
Sbjct: 1052 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 1111
Query: 216 -----------------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
G PT TY ++ +C +D+A++ + MK G +P
Sbjct: 1112 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT 1171
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
Y +LI+ LC + +D+ACK ++ M+D G+ PP L A++L + +D
Sbjct: 1172 YGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLD 1231
Query: 319 K 319
K
Sbjct: 1232 K 1232
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 2/300 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL N +++ + +E A+ VFD+M R PD SY +++ G +
Sbjct: 774 MQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGK 833
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M GF PD + +++ A C + A+ FR+M KP+ F +
Sbjct: 834 IQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 893
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKC 179
LI+GL + + +A + + + G++P T+ A++ C A+R+ ++ R
Sbjct: 894 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 953
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
PN TY ++ K + A +F RM ++ G P V+TY ++ C
Sbjct: 954 TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM-KEQGLFPNVNTYTTLINGHCKAGSFGR 1012
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + + M G +P ++ Y+ I+SLC + + +A + + G+ G ++ L Q
Sbjct: 1013 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 1072
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 142/348 (40%), Gaps = 39/348 (11%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + + +I CK + RA+ +F +MK++ P++ +YT L+ G + + E
Sbjct: 956 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 1015
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M D+GF P++ +Y I++ C R EA EL + + + + LI
Sbjct: 1016 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 1075
Query: 127 SEKRLSEALQFFGQSKKRGFE-----------------------------------PEAP 151
+ +++AL FF + K GFE P
Sbjct: 1076 KQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKE 1135
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
TY +++ YC I+ A + M++ G P++ TY ++ L K +EA +++ M
Sbjct: 1136 TYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 1195
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ + P V+ + +C AM + + + + + + TL+ LC E K
Sbjct: 1196 IDRGLSPPEVTRVTLAYE-YCKRNDSANAMILLEPLDKKLWIRTVR---TLVRKLCSEKK 1251
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ A +FQ++L+ + A + G L ++I +
Sbjct: 1252 VGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVTDLTERISR 1299
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 35/255 (13%)
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M++ G P ++ ++ + A +F EM P + ++ G +
Sbjct: 773 DMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDG 832
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC---------WSMR--------------- 165
++ EA ++ +RGF P+ T ++ A C W R
Sbjct: 833 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 892
Query: 166 -----------INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
I A+ M++EM + G PN T+ ++ L K G TE+A+ +F ++ R
Sbjct: 893 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 952
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
+P V TY ++ +C +++ A ++ MK +G+ P ++ Y+TLIN C
Sbjct: 953 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 1012
Query: 275 ACKYFQEMLDIGIRP 289
A + M D G P
Sbjct: 1013 AYELMNLMGDEGFMP 1027
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 110/243 (45%), Gaps = 4/243 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N ID+LCK A E+ +K + D +YTIL++ +Q ++
Sbjct: 1024 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 1083
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M GFE D+ I+I A C K+ E+ LF+ + + P+ + ++I+
Sbjct: 1084 LAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 1143
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + AL++F K+ G P++ TY +++ C +++A ++ + M G+ P
Sbjct: 1144 YCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPP 1203
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T + + K + A + + + +K + T +VR C +V +A +
Sbjct: 1204 EVTRVTLAYEYCKRNDSANAMILLEPLDKKLW----IRTVRTLVRKLCSEKKVGVAALFF 1259
Query: 245 DEM 247
++
Sbjct: 1260 QKL 1262
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
R+N+A M+ +M+ G+ P++ T + VL ++ G E A +VF MS + G P S+Y
Sbjct: 763 RLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR-GVVPDSSSY 821
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++V + ++ A R M RG +P + ++ +LC ++ A YF++M+D
Sbjct: 822 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 881
Query: 285 IGIRPPGQLFSNLKQALRDEG 305
+G +P F++L L +G
Sbjct: 882 LGFKPNLINFTSLIDGLCKKG 902
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
N + + + ++ RL+EA+ + +G P + T N V+ I A
Sbjct: 743 NLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYA 802
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ DEM G+ P++ +Y +++ + G+ +EA M ++ G P +T +++
Sbjct: 803 ENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILT 861
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C N V+ A+ + +M G P + +++LI+ LC + + A + +EM+ G +P
Sbjct: 862 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 921
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ L L G E A L K+
Sbjct: 922 NVYTHTALIDGLCKRGWTEKAFRLFLKL 949
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L + + GR EA + M + G P+ T V+ + ++ A ++DEM R
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQ-GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 812
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
GV+P Y ++ + K+ +A ++ M+ G P + + AL + G+ A
Sbjct: 813 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 872
Query: 311 VVLAQKIDKLRKTP 324
+ +K+ L P
Sbjct: 873 IWYFRKMIDLGFKP 886
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 157/354 (44%), Gaps = 37/354 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + L++ +CKS +A EV D+M+ + P+I +Y +++ G ++ +
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + GF+PD VSY ++ C+AKR+++ ELF EM NC P+ F L+
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ A+Q Q G N V+ C R++DA++ ++ M G P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------------------------- 215
T +Y VL L +A R E+A + K M RK
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414
Query: 216 -----GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
G E + TY +V FC +VD A+ ++ M + P Y+TL+ LC+ +
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAE 471
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+LD A + EML P F+ L +G+ + A+ L +++ + TP
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 525
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 151/318 (47%), Gaps = 4/318 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
++ G ++ +N L+ C+ ++ A+ + M PD +YT ++ G + +
Sbjct: 105 ERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRV 161
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ +M G +P VV+Y +++ A C + + +A+E+ EM A C P+ + +
Sbjct: 162 GEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
ING+ E R+ +A +F + GF+P+ +Y V+ C + R D + EM +
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN T+D+++ + G E A V ++MS G + IV+ C +VD A
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAF 340
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ + M + G P Y+T++ LC ++ +DA + +EM+ P F+ L
Sbjct: 341 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 400
Query: 302 RDEGMEETAVVLAQKIDK 319
+G+ E A +L +++ +
Sbjct: 401 CQKGLIEQATMLIEQMSE 418
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 5/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + E+ F+ L+ C+ VERA +V ++M + I++ +Q
Sbjct: 277 MEKNCMPNEV-TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G PD +SY ++ C A+R+++A EL +EM NC P+ F T
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I L + + +A Q + G E TYNA+V +C R++ A + M
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---P 452
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT TY +L L A R + A + M +K P V T+ ++V FC +D A
Sbjct: 453 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK-DCAPNVVTFNVLVSFFCQKGLMDEA 511
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + ++M G P + Y+TL++ + ++ ++A + ++ G+ P +S++
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L E E A+ + + L P
Sbjct: 572 LSREDRVEEAIKMFHIVQDLGMRP 595
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 138/322 (42%), Gaps = 39/322 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + + ++ LC++ E A+E+ +M ++ P+ ++ + Q+
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G E ++V+Y ++N C R D A+ELF M CKP+ + T
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTT 462
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL + +RL A + + ++ P T+N +V +C +++A ++++M + G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522
Query: 181 IGPNTRTYDIVL----------------HHLIKAG-------------------RTEEAY 205
PN TY+ +L H L+ G R EEA
Sbjct: 523 CTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F + + G P Y ++ C D A+ + M + G +P Y TLI
Sbjct: 583 KMF-HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641
Query: 266 LCHEDKLDDACKYFQEMLDIGI 287
L +ED L + +E+ G+
Sbjct: 642 LANEDFLKETRDLLRELCSRGV 663
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 116/253 (45%), Gaps = 4/253 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +N L++ C V+ A E+F M + P+ +YT LL G +
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E+ EM P+VV++ ++++ C DEA+EL +M C P+ + T
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G+ ++ EAL+ G P+ TY++++G R+ +A +M ++ G
Sbjct: 533 LLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P Y+ +L L K T+ A F M G P TY ++ +
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN-GCMPNELTYITLIEGLANEDFLKET 651
Query: 241 MRIWDEMKARGVL 253
+ E+ +RGVL
Sbjct: 652 RDLLRELCSRGVL 664
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 6/196 (3%)
Query: 108 ATNCKPSPHIF-CT-LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
AT+ +P ++ CT LI L R S+A + +++ G + YN +V YC +
Sbjct: 69 ATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQ 128
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++ A R++ M + P+ TY ++ L GR EA S+ M + G +P+V TY
Sbjct: 129 LDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR-GCQPSVVTYT 184
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+++ C + AM + DEM+A+G P + Y+ +IN +C E ++DDA ++ +
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244
Query: 286 GIRPPGQLFSNLKQAL 301
G +P ++ + + L
Sbjct: 245 GFQPDTVSYTTVLKGL 260
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 160/305 (52%), Gaps = 7/305 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + +ID LCK VE E F +M+ R ++PD +Y L++G+ + K + +
Sbjct: 321 IPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHR 380
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
VYR+M G V+Y I+++ C A R EA F ME C + + L++G
Sbjct: 381 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 440
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
SE +S A++ F + RG EP +YN ++ C + ++ AY +++ + + P+
Sbjct: 441 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 500
Query: 187 TYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T++ LH L + T + +F+ M + GT P + +Y I++ C +++ + I+
Sbjct: 501 TFNSFLHGLCQRLDTVGDGVELFESMVSQ-GTSPNLHSYSILMDGICRAGGLEVTLEIFH 559
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDE 304
EM +RGV P + +++TLI LC ++D+A + F+E L+ P + +L AL R E
Sbjct: 560 EMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDALSRCE 618
Query: 305 GMEET 309
MEE
Sbjct: 619 RMEEA 623
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 148/297 (49%), Gaps = 6/297 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N ID LCK+ V+ A ++ KM +++ P +YT L++G + L
Sbjct: 71 GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M + G P + +Y ++I+ A R +EA +F +M C+P ++ LI+G
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190
Query: 125 LGSEKRLSEALQFFGQ----SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L +L EAL + Q RG EP+ +N V+ C S + DA DE+
Sbjct: 191 LAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD-S 249
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ T++ ++ L KA RTEEA + K+MS + PT+ TY +V F ++D A
Sbjct: 250 LDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERR-CFPTLFTYTSLVDGFLKLGRLDEA 308
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ E RG +P Y+++I+ LC ++++ C+ F EM + G P ++ L
Sbjct: 309 LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAAL 365
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 157/368 (42%), Gaps = 56/368 (15%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK+ ++RA + D+M PD+ ++T+++ G ++K L V G
Sbjct: 15 LLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG 71
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
EPD V+Y + I+ C A+R D+A +L ++M+ C P+ + L++GL RL EA+
Sbjct: 72 CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 131
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q ++G P TY V+ + R+ +A R+ +M G P+ Y ++ L
Sbjct: 132 AILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGL 191
Query: 196 IKAGRTEEAYSVFKRMSRKP---GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE------ 246
K G+ +EA +M G EP V + +V+R C + ++ A+ +DE
Sbjct: 192 AKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLD 251
Query: 247 ----------------------------MKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
M R P + Y++L++ +LD+A
Sbjct: 252 LTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQ 311
Query: 279 FQEMLDIGIRPPGQLFSNLKQAL----------------RDEGMEETAVVLAQKIDKLRK 322
+E ++ G P ++++ L R+ G E AV A ID K
Sbjct: 312 LKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMK 371
Query: 323 TPLVDRGQ 330
++ +
Sbjct: 372 AKMIPKAH 379
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 156/358 (43%), Gaps = 39/358 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ----QKN 60
G L + +ID L K+ VE A+ +F M PD YT L+ G + +
Sbjct: 141 GNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEA 200
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMIN-------------------------------- 88
L+ +N++ G EPDVV + ++I
Sbjct: 201 LVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPL 260
Query: 89 --AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
A C A+R +EA+ ++M C P+ + +L++G RL EAL ++ +RGF
Sbjct: 261 VAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGF 320
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P+A TY +++ C R+ + EMR G P+ TY ++ +KA +A+
Sbjct: 321 IPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHR 380
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
V+++M + GT + TY I++ C +V A + M+ RG + + YS L++
Sbjct: 381 VYRQM-LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGF 439
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
C E + A + F+ MLD G P ++ + + L G A +K+ + R P
Sbjct: 440 CSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP 497
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 151/348 (43%), Gaps = 38/348 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ LCK+ E A KM +RR P + +YT L++G+ + L +E
Sbjct: 257 FNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAV 316
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF PD V+Y +I+ C R +E E F EM +P + LI+G K +
Sbjct: 317 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIP 376
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + Q + G TYN ++ C + R+ +AY M + G TY ++
Sbjct: 377 KAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALM 436
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA------------ 240
G A +F+RM + G EP + +Y I++R C ++ A
Sbjct: 437 DGFCSEGNVSAAVELFRRMLDR-GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 495
Query: 241 ------------------------MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+ +++ M ++G P +H YS L++ +C L+
Sbjct: 496 CPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTL 555
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ F EM+ G+ P +F+ L + L G + A+ + +++++ R P
Sbjct: 556 EIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELER-RSAP 602
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 108/234 (46%), Gaps = 9/234 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + ++ L+D C +V A E+F +M R +P++ SY I++ G +
Sbjct: 420 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 479
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD---EAVELFREMEATNCKPSPHI 117
L + ++ PDV ++ ++ C +R D + VELF M + P+ H
Sbjct: 480 LAKAYFYFEKLLQRRLCPDVYTFNSFLHGLC--QRLDTVGDGVELFESMVSQGTSPNLHS 537
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L++G+ L L+ F + RG P+ +N ++ C + R+++A + E+
Sbjct: 538 YSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE 597
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ P+ +Y +L L + R EEA + M + G P Y++ VR
Sbjct: 598 RRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKLQ-GCAP--RHYDLTVRFL 647
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 158/314 (50%), Gaps = 15/314 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G+ +L + LI+ C H+ A VF + KR F PD + L++G G+ K
Sbjct: 88 GITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKT 147
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L ++ ++ GF+ D VSYG +IN C A L R++E + KP ++ T+
Sbjct: 148 LYFHD---QVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTI 204
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
IN L K L +A + + +G P+ TY ++ +C ++ +A+ +++EM+ I
Sbjct: 205 INSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNI 264
Query: 182 GPNTRTYDIVLHHLIKAGR---TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
P+ T+ +++ L K G+ +EA S+F+ M K P + TY ++ C N ++
Sbjct: 265 NPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHK-NMIPDIVTYNSLIDGLCKNHHLE 323
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML----DIGIRPPGQLF 294
A+ + EMK G+ P ++ Y+ L++ LC +L+ A ++FQ +L + + P +
Sbjct: 324 RAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMI 383
Query: 295 SNL-KQALRDEGME 307
+ L K L E M+
Sbjct: 384 NGLCKAGLFGEAMD 397
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 139/286 (48%), Gaps = 4/286 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + LI+ LCK+ + + K++ PD+ Y ++ + K L
Sbjct: 158 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDA 217
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+VY EM G PDVV+Y +I+ C + EA L EM+ N P + F LI+
Sbjct: 218 CDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDA 277
Query: 125 LGSE---KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
LG E K + EA+ F + K + P+ TYN+++ C + + A ++ EM++ GI
Sbjct: 278 LGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGI 337
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ +Y I+L L K GR E A F+ + K G V Y +++ C AM
Sbjct: 338 QPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVK-GCHLNVWPYNVMINGLCKAGLFGEAM 396
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +M+ +G +P + T+I +L +D+ D A K +EM+ G+
Sbjct: 397 DLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 4/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++ +K ++ +N +I++LCK++ + A +V+ +M + PD+ +YT L+ G+
Sbjct: 189 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGK 248
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINA---HCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + EMK PDV ++ ++I+A K DEA+ LF EM+ N P
Sbjct: 249 MKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVT 308
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LI+GL L A+ + K+ G +P+ +Y ++ C R+ A +
Sbjct: 309 YNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLL 368
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G N Y+++++ L KAG EA + +M K G P T+ ++ +
Sbjct: 369 VKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGK-GCMPNAITFRTIICALSEKDEN 427
Query: 238 DMAMRIWDEMKARGVL 253
D A +I EM ARG+L
Sbjct: 428 DKAEKILREMIARGLL 443
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 131/322 (40%), Gaps = 39/322 (12%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
A F+ M R P + +L + K ++ ++++ + +G PD+ + I+
Sbjct: 40 HHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSIL 99
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
IN C A +F + P TLI GL + + L F Q +GF
Sbjct: 100 INCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGF 159
Query: 147 E-----------------------------------PEAPTYNAVVGAYCWSMRINDAYR 171
+ P+ YN ++ + C + + DA
Sbjct: 160 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACD 219
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ EM GI P+ TY ++H G+ +EA+S+ M K P V T+ +++
Sbjct: 220 VYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLK-NINPDVYTFSVLIDAL 278
Query: 232 CYNAQ---VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+ VD AM +++EMK + ++P + Y++LI+ LC L+ A +EM + GI+
Sbjct: 279 GKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQ 338
Query: 289 PPGQLFSNLKQALRDEGMEETA 310
P ++ L L G E A
Sbjct: 339 PDVYSYTILLDGLCKGGRLEIA 360
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K +PD +N LID LCK+ H+ERA + +MK+ PD+ SYTILL+G + L
Sbjct: 300 KNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEI 359
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E ++ + G +V Y +MIN C A + EA++L +ME C P+ F T+I
Sbjct: 360 AKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIIC 419
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPE 149
L + +A + + RG E
Sbjct: 420 ALSEKDENDKAEKILREMIARGLLKE 445
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
++ +M MR P T ++ +L L+K R S+FK+ G P + T I++
Sbjct: 45 SFNLMLLMRP---PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPN-GITPDLCTLSILI 100
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
FC+ A + +A ++ + RG P +TLI LC ++ + +++ G +
Sbjct: 101 NCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQ 160
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+ L L G + L +K++
Sbjct: 161 LDQVSYGTLINGLCKAGETKAVARLLRKLE 190
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 152/301 (50%), Gaps = 6/301 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQKN 60
L++ +PD +N L++ LC + A E+ M D PD+ SY+ ++ G+ ++ +
Sbjct: 44 LRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD 103
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L Y EM D P+VV+Y +I A C A+ D+A+E+ M + P + +
Sbjct: 104 LDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS 163
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++G S + EA+ F + + G EP+ TYN+++ C + R +A ++ D M K G
Sbjct: 164 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 223
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY +L G E + + M R G P + I+V + +V+ A
Sbjct: 224 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILVCAYAKQEKVEEA 282
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M ++ +M+ +G+ P Y +I LC +++DA YF++M+D G+ P ++++L
Sbjct: 283 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 342
Query: 301 L 301
L
Sbjct: 343 L 343
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 149/297 (50%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N L+D LCK+ A+++FD M KR P+I +Y LL+G+ + L+ M
Sbjct: 188 GVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 247
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G P+ + I++ A+ ++ +EA+ +F +M P+ + +I
Sbjct: 248 HGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGI 307
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ +A+ +F Q G P YN+++ C + A ++ EM GI N
Sbjct: 308 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 367
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ ++ K GR E+ +F M R G +P + TY ++ +C ++D A ++
Sbjct: 368 TIFFNSIIDSHCKEGRVIESEKLFDLMVR-IGVKPDIITYSTLIDGYCLAGKMDEATKLL 426
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M + G+ P YSTLIN C ++ DA F+EM G+ P ++ + Q L
Sbjct: 427 ASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 158/350 (45%), Gaps = 42/350 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
+N +I LCK++ V++A EV M K PD +Y ++ G+ GQ K + +
Sbjct: 126 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF---LK 182
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS-- 127
+M+ DG EPDVV+Y +++ C R EA ++F M KP + TL+ G +
Sbjct: 183 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 242
Query: 128 ---------------------------------EKRLSEALQFFGQSKKRGFEPEAPTYN 154
++++ EA+ F + +++G P A TY
Sbjct: 243 ALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 302
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
AV+G C S R+ DA ++M G+ P Y+ ++H L + E A + M +
Sbjct: 303 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 362
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
T+ + ++ C +V + +++D M GV P + YSTLI+ C K+D+
Sbjct: 363 GICLNTI-FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 421
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
A K M+ +G++P +S L + A+VL ++++ +P
Sbjct: 422 ATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSP 471
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID+ CK V ++++FD M + PDI +Y+ L++G+ + ++ M
Sbjct: 371 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 430
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD V+Y +IN +C R +A+ LFREME++ P + ++ GL +R +
Sbjct: 431 SVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 490
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + K G + E TYN ++ C + +DA RM + + RT++I++
Sbjct: 491 AAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMI 550
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F S G P TY ++ ++ +++ M+ G
Sbjct: 551 DALLKVGRNDEAKDLFVAFSSN-GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 609
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
M + ++ L ++ A Y M+D
Sbjct: 610 TVDSGMLNFIVRELLQRGEITRAGTYLS-MID 640
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 133/293 (45%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LC ERA+E+ +M R + + +++ ++ ++ +++ M
Sbjct: 336 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 395
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+++Y +I+ +C A + DEA +L M + KP + TLING R+
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMK 455
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL F + + G P+ TYN ++ + R A + + K G TY+I+L
Sbjct: 456 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIIL 515
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K T++A +F+ + + T+ I++ + D A ++ + G+
Sbjct: 516 HGLCKNKLTDDALRMFQNLCLMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 574
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P Y + ++ + L++ + F M D G + + + + L G
Sbjct: 575 VPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 627
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ ++ LID C + ++ A ++ M PD +Y+ L+ G+ +
Sbjct: 394 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR 453
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++REM+ G PD+++Y I++ +R A EL+ + + + +
Sbjct: 454 MKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNI 513
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL K +AL+ F + EA T+N ++ A R ++A + G
Sbjct: 514 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 573
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ PN TY ++ ++I G EE +F M
Sbjct: 574 LVPNYWTYRLMAENIIGQGLLEELDQLFLSM 604
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 92/214 (42%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + ++ LI+ CK ++ A +F +M+ PDI +Y I+L+G Q +
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+Y + G + ++ +Y I+++ C K D+A+ +F+ + + K F
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 548
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L R EA F G P TY + + + ++ M G
Sbjct: 549 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ + ++ L++ G A + + K
Sbjct: 609 CTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 642
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--IGPNTRTYDI 190
+A F + +RG P+ +YN ++ C R +A ++ M G P+ +Y
Sbjct: 35 DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
V++ K G ++ YS + M + P V TY ++ C VD AM + M
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQR-ISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
GV+P Y+++++ C + +A + ++M G+ P +++L L G
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 207
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG-TEPTVSTYEI 226
DA + DE+ + GI P+ +Y+I+L+ L R++EA + M+ G P V +Y
Sbjct: 35 DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
V+ F +D ++EM + + P + Y+++I +LC +D A + M+ G
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ P ++++ G + A+V +K+
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM 184
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 152/297 (51%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ L++ LCK+ A+++FD M KR +PDI +Y LL+G+ + L+ M
Sbjct: 301 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEM 360
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G +PD + I+I A+ ++ D+A+ +F +M P+ + T+I+
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +A+ +F Q G P Y +++ C + + A ++ EM GI N
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLN 480
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ ++ K GR E+ +F M R G +P + TY ++ C ++D A ++
Sbjct: 481 TIFFNSIIDSHCKEGRVIESEKLFDLMVRI-GVKPDIITYNTLIDGCCLAGKMDEATKLL 539
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M + GV P + Y TLIN C ++DDA F+EM+ G+ P ++ + Q L
Sbjct: 540 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 154/301 (51%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +++ K ++A + +M R PD+ +Y+ ++ + + +
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA 255
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV M +G PD ++Y +++ +CS+ + EA+ ++M + +P+ + +L+N
Sbjct: 256 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R +EA + F KRG EP+ TY ++ Y + + + ++D M + GI P+
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPD 375
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++I++ K + ++A VF +M R+ G P V Y V+ + C + VD AM +
Sbjct: 376 HHVFNILICAYAKQEKVDQAMLVFSKM-RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++M G+ P + +Y++LI+ LC DK D A + EMLD GI F+++ + E
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494
Query: 305 G 305
G
Sbjct: 495 G 495
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 158/338 (46%), Gaps = 40/338 (11%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQE-VFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
K G + + F L+ LC + A + V +M + PD+ SY LL+G +
Sbjct: 120 KKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRS 179
Query: 62 LSMNEVYREMKDD---GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
E+ M DD G PDVVSY ++N D+A + EM P +
Sbjct: 180 QEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 239
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++I L + + +A++ K G P+ TYN+++ YC S + +A + +MR
Sbjct: 240 SSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS 299
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-------------- 224
G+ PN TY ++++L K GR+ EA +F M+++ G EP ++TY
Sbjct: 300 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGYATKGALV 358
Query: 225 ------EIVVR------------MFCYNA---QVDMAMRIWDEMKARGVLPVMHMYSTLI 263
+++VR + C A +VD AM ++ +M+ G+ P + Y T+I
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ LC +DDA YF++M+D G+ P ++++L L
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + +ID LCKS V+ A F++M P+I YT L+ G
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM D G + + + +I++HC R E+ +LF M KP + T
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ EA + G +P+ TY ++ YC R++DA + EM G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+I+L L RT A ++ ++ K GT+ +STY I++ C N D A
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSIT-KSGTQLELSTYNIILHGLCKNNLTDEA 640
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R++ + + ++ +I +L ++D+A F G+ P + +S + +
Sbjct: 641 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 700
Query: 301 LRDEGMEE 308
L ++G E
Sbjct: 701 LIEQGSLE 708
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 1/267 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID+ CK V ++++FD M + PDI +Y L++G + ++ M
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+V+YG +IN +C R D+A+ LF+EM ++ P+ + ++ GL +R +
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + K G + E TYN ++ C + ++A RM + + TRT++I++
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F S G P V TY ++ ++ ++ M+ G
Sbjct: 664 GALLKCGRMDEAKDLFAAHSAN-GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 722
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYF 279
M ++++ L + A Y
Sbjct: 723 SADSRMLNSIVRKLLQRGDITRAGTYL 749
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 148/394 (37%), Gaps = 95/394 (24%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG---FEPDVVSY 83
E A+ VFD++ +R I L + +++ Y M G P V +Y
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 95
Query: 84 GIMINAHCSAKRYD-----------------------------------EAVEL-FREME 107
I+I C A R D +A+++ R M
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQ--------------------------FF--G 139
C P + L+ GL E R EAL+ FF G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 140 QSKK----------RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
S K RG P+ TY++++ A C + ++ A +++ M K G+ P+ TY+
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+LH +G+ +EA K+M R G EP V TY ++ C N + A +I+D M
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKM-RSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA--------- 300
RG+ P + Y TL+ + L + M+ GI+P +F+ L A
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394
Query: 301 -------LRDEGMEETAVVLAQKIDKLRKTPLVD 327
+R G+ V ID L K+ VD
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 63/152 (41%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G + EL +N ++ LCK+ + A +F + + +++ I++ +
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +G PDV +Y +M +E +LF ME C + +
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 731
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
++ L ++ A + ++ F EA T
Sbjct: 732 IVRKLLQRGDITRAGTYLFMIDEKHFSLEAST 763
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 157/354 (44%), Gaps = 37/354 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + L++ +CKS +A EV D+M+ + P+I +Y +++ G ++ +
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + GF+PD VSY ++ C+AKR+++ ELF EM NC P+ F L+
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ A+Q Q G N V+ C R++DA++ ++ M G P+
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------------------------- 215
T +Y VL L +A R E+A + K M RK
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 414
Query: 216 -----GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
G E + TY +V FC +VD A+ ++ M + P Y+TL+ LC+ +
Sbjct: 415 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAE 471
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+LD A + EML P F+ L +G+ + A+ L +++ + TP
Sbjct: 472 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 525
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 151/318 (47%), Gaps = 4/318 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
++ G ++ +N L+ C+ ++ A+ + M PD +YT ++ G + +
Sbjct: 105 ERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRV 161
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ +M G +P VV+Y +++ A C + + +A+E+ EM A C P+ + +
Sbjct: 162 GEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 221
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
ING+ E R+ +A +F + GF+P+ +Y V+ C + R D + EM +
Sbjct: 222 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 281
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN T+D+++ + G E A V ++MS G + IV+ C +VD A
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAF 340
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ + M + G P Y+T++ LC ++ +DA + +EM+ P F+ L
Sbjct: 341 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 400
Query: 302 RDEGMEETAVVLAQKIDK 319
+G+ E A +L +++ +
Sbjct: 401 CQKGLIEQATMLIEQMSE 418
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 5/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + E+ F+ L+ C+ VERA +V ++M + I++ +Q
Sbjct: 277 MEKNCMPNEV-TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 335
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G PD +SY ++ C A+R+++A EL +EM NC P+ F T
Sbjct: 336 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 395
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I L + + +A Q + G E TYNA+V +C R++ A + M
Sbjct: 396 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---P 452
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT TY +L L A R + A + M +K P V T+ ++V FC +D A
Sbjct: 453 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK-DCAPNVVTFNVLVSFFCQKGLMDEA 511
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + ++M G P + Y+TL++ + + ++A + ++ G+ P +S++
Sbjct: 512 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 571
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L E E A+ + + L P
Sbjct: 572 LSREDRVEEAIKMFHIVQDLGMRP 595
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 39/322 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + + ++ LC++ E A+E+ +M ++ P+ ++ + Q+
Sbjct: 346 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G E ++V+Y ++N C R D A+ELF M CKP+ + T
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTT 462
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL + +RL A + + ++ P T+N +V +C +++A ++++M + G
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 522
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-------------EIV 227
PN TY+ +L + K +EEA + + G P + TY E
Sbjct: 523 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSN-GVSPDIVTYSSIIGVLSREDRVEEA 581
Query: 228 VRMF----------------------CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++MF C D A+ + M + G +P Y TLI
Sbjct: 582 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 641
Query: 266 LCHEDKLDDACKYFQEMLDIGI 287
L +ED L + +E+ G+
Sbjct: 642 LANEDFLKETRDLLRELCSRGV 663
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +N L++ C V+ A E+F M + P+ +YT LL G +
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 472
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E+ EM P+VV++ ++++ C DEA+EL +M C P+ + T
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G+ + EAL+ G P+ TY++++G R+ +A +M ++ G
Sbjct: 533 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P Y+ +L L K T+ A F M G P TY ++ +
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN-GCMPNELTYITLIEGLANEDFLKET 651
Query: 241 MRIWDEMKARGVL 253
+ E+ +RGVL
Sbjct: 652 RDLLRELCSRGVL 664
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 6/196 (3%)
Query: 108 ATNCKPSPHIF-CT-LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
AT+ +P ++ CT LI L R S+A + +++ G + YN +V YC +
Sbjct: 69 ATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQ 128
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++ A R++ M + P+ TY ++ L GR EA S+ M + G +P+V TY
Sbjct: 129 LDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR-GCQPSVVTYT 184
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+++ C + AM + DEM+A+G P + Y+ +IN +C E ++DDA ++ +
Sbjct: 185 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 244
Query: 286 GIRPPGQLFSNLKQAL 301
G +P ++ + + L
Sbjct: 245 GFQPDTVSYTTVLKGL 260
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 2/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + F LI + V+ A + D+MK D DI Y + ++ +G+
Sbjct: 221 MQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGK 280
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK G PD V+Y MI C A R DEAVELF ++E P + + T
Sbjct: 281 VDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNT 340
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G GS + EA + K +G P YN ++ R+ +A R+ +EM++
Sbjct: 341 MIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA 400
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+I++ L + G+ A + M R G P V T I++ C +++ A
Sbjct: 401 V-PNVPTYNILIDMLCREGKLNAALEIRDDMER-AGLFPNVLTVNIMIDRLCKAQKLEEA 458
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I++ M + P +S+LI+ L ++DDA +++MLD G P ++++L ++
Sbjct: 459 CSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRS 518
Query: 301 LRDEGMEE 308
G +E
Sbjct: 519 FFKCGRKE 526
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 167/349 (47%), Gaps = 37/349 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ L K R VE A +F++MK R P++ +Y IL++ ++ L + E+ +M+
Sbjct: 373 YNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDME 431
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V++ IMI+ C A++ +EA +F M+ C P+ F +LI+GLG R+
Sbjct: 432 RAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVD 491
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG---------- 182
+A + + G P A Y +++ ++ R D +++ EM G
Sbjct: 492 DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 551
Query: 183 -------------------------PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
P+ R+Y I++H L+KAG E Y +F M ++ G
Sbjct: 552 DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM-KEQGC 610
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
Y V+ FC + +V+ A ++ +EMK +G P + Y ++I+ L D+LD+A
Sbjct: 611 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYM 670
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+E GI+ ++S+L G + A ++ +++ + TP V
Sbjct: 671 LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 719
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 157/324 (48%), Gaps = 2/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KF + + LI L + R + +F +M++ ++ ++ +T L+ + ++
Sbjct: 186 MRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGR 245
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK + + D+V Y + I+ A + D + + F EM++ P + +
Sbjct: 246 VDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS 305
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L RL EA++ F Q ++ P A YN ++ Y + + ++AY +++ + G
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y+ +L L K R EEA +F+ M R P V TY I++ M C +++ A
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRD--AVPNVPTYNILIDMLCREGKLNAA 423
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I D+M+ G+ P + + +I+ LC KL++AC F+ M D P FS+L
Sbjct: 424 LEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDG 483
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A L +K+ P
Sbjct: 484 LGKCGRVDDAYSLYEKMLDCGHVP 507
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G +L N +D + K+ E+ + +F ++ F PD +SY+IL+ G +
Sbjct: 539 GCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANET 598
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ MK+ G D +Y +I+ C + + ++A +L EM+ P+ + ++I+G
Sbjct: 599 YELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDG 658
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL EA F ++K G + Y++++ + RI++AY +M+E+ + G+ PN
Sbjct: 659 LAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 718
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ +L L+KA EA F+ M + P TY I++ C + + A W
Sbjct: 719 VYTWNCLLDALVKAEEINEALICFQSM-KDLKCPPNQITYSILINGLCRVRKFNKAFVFW 777
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM+ G+ P Y+T+I+ L + +A F G P ++ + + L
Sbjct: 778 QEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 834
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 168/360 (46%), Gaps = 38/360 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL + N +ID LCK++ +E A +F+ M + P+ +++ L++G G+
Sbjct: 430 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 489
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +Y +M D G P + Y +I + R ++ ++++EM T C P + T
Sbjct: 490 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 549
Query: 121 -----------------------------------LINGLGSEKRLSEALQFFGQSKKRG 145
LI+GL +E + F K++G
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+ YNAV+ +C S ++N AY++++EM+ G P TY V+ L K R +EAY
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 669
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ ++ G + V Y ++ F ++D A I +E+ +G+ P ++ ++ L+++
Sbjct: 670 MLFEE-AKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 728
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQL-FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L +++++A FQ M D+ PP Q+ +S L L A V Q++ KL P
Sbjct: 729 LVKAEEINEALICFQSMKDLKC-PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKP 787
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 5/309 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ LI L K+ E+F MK++ D +Y +++G+ + + +
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 635
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EMK G P VV+YG +I+ R DEA LF E ++ K + ++ +LI+G G
Sbjct: 636 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 695
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA + ++G P T+N ++ A + IN+A M+ PN
Sbjct: 696 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 755
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I+++ L + + +A+ ++ M +K G +P TY ++ + A ++
Sbjct: 756 TYSILINGLCRVRKFNKAFVFWQEM-QKLGLKPNTITYTTMISGLAKAGNILEASGLFSR 814
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEG 305
KA G +P Y+ +I L +K DA F+E G + L AL + E
Sbjct: 815 FKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAEC 874
Query: 306 MEETAVVLA 314
+E+ A+V A
Sbjct: 875 LEQAAIVGA 883
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 106/203 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + ++ LID K ++ A + +++ ++ P++ ++ LL+ + + +
Sbjct: 679 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 738
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ MKD P+ ++Y I+IN C +++++A ++EM+ KP+ + T+I+G
Sbjct: 739 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 798
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + EA F + K G P++ +YNA++ + + DAY + +E R G +
Sbjct: 799 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIH 858
Query: 185 TRTYDIVLHHLIKAGRTEEAYSV 207
T+T ++L L KA E+A V
Sbjct: 859 TKTCVVLLDALHKAECLEQAAIV 881
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 89/201 (44%), Gaps = 1/201 (0%)
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+Y ++ +D + EM + PS +I L+ ++L EA
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+K F P Y ++GA + + +M++ G N + ++ + GR
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
+ A S+ M + + + Y + + F +VDM+ + + EMK+ G++P Y++
Sbjct: 247 DAALSLLDEM-KSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS 305
Query: 262 LINSLCHEDKLDDACKYFQEM 282
+I LC ++LD+A + F+++
Sbjct: 306 MIGVLCKANRLDEAVELFEQL 326
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 105/235 (44%), Gaps = 8/235 (3%)
Query: 94 KRYDEAVELF----REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
K + AV F ++ E +C P + +L+ + + + GF P
Sbjct: 103 KDANTAVNYFQWAEKQTEKVHC---PEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPS 159
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+ +V S ++ +A+ ++ MRK P Y I++ L + + +F
Sbjct: 160 SNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFH 219
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+M ++ G E V + ++R+F +VD A+ + DEMK+ + + +Y+ I+
Sbjct: 220 QM-QELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKA 278
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
K+D + K+F EM G+ P ++++ L + AV L +++++ RK P
Sbjct: 279 GKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVP 333
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 157/354 (44%), Gaps = 37/354 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + L++ +CKS +A EV D+M+ + P+I +Y +++ G ++ +
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + GF+PD VSY ++ C+AKR+++ ELF EM NC P+ F L+
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ A+Q Q G N V+ C R++DA++ ++ M G P+
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------------------------- 215
T +Y VL L +A R E+A + K M RK
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIE 445
Query: 216 -----GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
G E + TY +V FC +VD A+ ++ M + P Y+TL+ LC+ +
Sbjct: 446 QMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAE 502
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+LD A + EML P F+ L +G+ + A+ L +++ + TP
Sbjct: 503 RLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 556
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 151/318 (47%), Gaps = 4/318 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
++ G ++ +N L+ C+ ++ A+ + M PD +YT ++ G + +
Sbjct: 136 ERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRV 192
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ +M G +P VV+Y +++ A C + + +A+E+ EM A C P+ + +
Sbjct: 193 GEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 252
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
ING+ E R+ +A +F + GF+P+ +Y V+ C + R D + EM +
Sbjct: 253 INGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNC 312
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN T+D+++ + G E A V ++MS G + IV+ C +VD A
Sbjct: 313 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAF 371
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ + M + G P Y+T++ LC ++ +DA + +EM+ P F+ L
Sbjct: 372 QFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICIL 431
Query: 302 RDEGMEETAVVLAQKIDK 319
+G+ E A +L +++ +
Sbjct: 432 CQKGLIEQATMLIEQMSE 449
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 147/324 (45%), Gaps = 5/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + E+ F+ L+ C+ VERA +V ++M + I++ +Q
Sbjct: 308 MEKNCMPNEV-TFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 366
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G PD +SY ++ C A+R+++A EL +EM NC P+ F T
Sbjct: 367 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I L + + +A Q + G E TYNA+V +C R++ A + M
Sbjct: 427 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---P 483
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT TY +L L A R + A + M +K P V T+ ++V FC +D A
Sbjct: 484 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK-DCAPNVVTFNVLVSFFCQKGLMDEA 542
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + ++M G P + Y+TL++ + + ++A + ++ G+ P +S++
Sbjct: 543 IELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGV 602
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L E E A+ + + L P
Sbjct: 603 LSREDRVEEAIKMFHIVQDLGMRP 626
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 39/322 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + + ++ LC++ E A+E+ +M ++ P+ ++ + Q+
Sbjct: 377 MGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 436
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G E ++V+Y ++N C R D A+ELF M CKP+ + T
Sbjct: 437 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTT 493
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL + +RL A + + ++ P T+N +V +C +++A ++++M + G
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-------------EIV 227
PN TY+ +L + K +EEA + + G P + TY E
Sbjct: 554 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSN-GVSPDIVTYSSIIGVLSREDRVEEA 612
Query: 228 VRMF----------------------CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++MF C D A+ + M + G +P Y TLI
Sbjct: 613 IKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEG 672
Query: 266 LCHEDKLDDACKYFQEMLDIGI 287
L +ED L + +E+ G+
Sbjct: 673 LANEDFLKETRDLLRELCSRGV 694
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 4/253 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +N L++ C V+ A E+F M + P+ +YT LL G +
Sbjct: 447 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAER 503
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E+ EM P+VV++ ++++ C DEA+EL +M C P+ + T
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 563
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G+ + EAL+ G P+ TY++++G R+ +A +M ++ G
Sbjct: 564 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 623
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P Y+ +L L K T+ A F M G P TY ++ +
Sbjct: 624 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSN-GCMPNELTYITLIEGLANEDFLKET 682
Query: 241 MRIWDEMKARGVL 253
+ E+ +RGVL
Sbjct: 683 RDLLRELCSRGVL 695
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 6/196 (3%)
Query: 108 ATNCKPSPHIF-CT-LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
AT+ +P ++ CT LI L R S+A + +++ G + YN +V YC +
Sbjct: 100 ATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQ 159
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++ A R++ M + P+ TY ++ L GR EA S+ M + G +P+V TY
Sbjct: 160 LDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR-GCQPSVVTYT 215
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+++ C + AM + DEM+A+G P + Y+ +IN +C E ++DDA ++ +
Sbjct: 216 VLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSY 275
Query: 286 GIRPPGQLFSNLKQAL 301
G +P ++ + + L
Sbjct: 276 GFQPDTVSYTTVLKGL 291
>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
Length = 584
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 166/322 (51%), Gaps = 6/322 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQK 59
M G+ ++ F +I CK+R +ERA E+F +M K R PD Y +L++G+ ++
Sbjct: 121 MRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKEL 180
Query: 60 NLLSMNEVYREMK-DDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE-MEATNCKPSPHI 117
+ E+ REM+ + +PDVV Y +++ C + R+ EA + E M C P+
Sbjct: 181 RMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVT 240
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LI G K++ A++ + +R +P +Y+ ++ + R+ DAYR++ EM
Sbjct: 241 YTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREME 300
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G N Y ++ L K+G ++AY++++ M R G P TY ++ FC N +
Sbjct: 301 TLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRS-GAFPNQRTYATLIDTFCRNDRT 359
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ A+ ++D ++ L V MY+ +++ LC E +LDDA F+EM G+ ++ L
Sbjct: 360 ETALGLFDHIRDYCPLDVA-MYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVL 418
Query: 298 KQ-ALRDEGMEETAVVLAQKID 318
A R E EE +L + D
Sbjct: 419 LHGAFRSERPEEAFRILEELGD 440
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 144/294 (48%), Gaps = 7/294 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI CK++ ++ A +++ M +R+ P I SY+++++G + +
Sbjct: 233 GCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDA 292
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V REM+ G E +VV Y +I+ C + D+A L+R M+ + P+ + TLI+
Sbjct: 293 YRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDT 352
Query: 125 LGSEKRLSEALQFFGQSKKRGFEP-EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
R AL F R + P + Y AVV C R++DA + EMR G+
Sbjct: 353 FCRNDRTETALGLFDH--IRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSA 410
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+T Y+++LH ++ R EEA+ + + + PG + TY V+ C ++ M +
Sbjct: 411 DTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVL 466
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ EM+ RG+ P YS LI+ L ++ A +EML G+ PP + +
Sbjct: 467 FYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRV 520
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 5/306 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+ID CKS + A + M P+ ++ L++ + L M+D
Sbjct: 65 VIDRACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRDA 124
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCTLINGLGSEKRLSE 133
G PDVV++ +MI C + + A E+F+EM +N C+P ++ LI+G E R+
Sbjct: 125 GIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDR 184
Query: 134 ALQFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE-MRKCGIGPNTRTYDIV 191
AL+ + + +R +P+ YN++V C S R +A++ +DE M G P TY +
Sbjct: 185 ALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSL 244
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ KA + + A ++ M + +PT+ +Y +++ +V A R+ EM+ G
Sbjct: 245 IRGACKAKKMKLAVRIWNAMLERK-IQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLG 303
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ +Y+TLI+ LC LDDA ++ M G P + ++ L ETA+
Sbjct: 304 CELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETAL 363
Query: 312 VLAQKI 317
L I
Sbjct: 364 GLFDHI 369
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + + + LID LCKS ++ A ++ MK+ P+ ++Y L++ + +
Sbjct: 299 METLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDR 358
Query: 61 LLSMNEVYREMKDDGFEP-DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ ++ ++D + P DV Y +++ C +R D+A LFREM H +
Sbjct: 359 TETALGLFDHIRD--YCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYN 416
Query: 120 TLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L++G +R EA + + G TYN V+ C + + EMR+
Sbjct: 417 VLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQ 472
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
GI P+ TY ++ L+ +G A+ + + M G P VV C++ + D
Sbjct: 473 RGIAPDFATYSALIDRLLGSGEIGRAFDLCEEM-LASGLSPPSGVLGRVVARLCWSRRGD 531
Query: 239 MAMRI 243
+A ++
Sbjct: 532 LAAKV 536
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDP-DIKSYTILLEGWGQQKNLLSMNEVYREM 71
+ LIDT C++ E A +FD + R + P D+ YT ++ G +++ L ++REM
Sbjct: 346 YATLIDTFCRNDRTETALGLFDHI--RDYCPLDVAMYTAVVSGLCRERRLDDARALFREM 403
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKR 130
+ G D +Y ++++ ++R +EA + E+ + C + + T+I G
Sbjct: 404 RLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC---- 459
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L + F + ++RG P+ TY+A++ S I A+ + +EM G+ P +
Sbjct: 460 LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGR 519
Query: 191 VLHHLIKAGRTEEAYSVFK 209
V+ L + R + A V +
Sbjct: 520 VVARLCWSRRGDLAAKVIE 538
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 105/239 (43%), Gaps = 3/239 (1%)
Query: 85 IMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
++I+ C + A+ + M + P+ H F +LI+ L RL++A + +
Sbjct: 64 VVIDRACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLADAARALELMRD 123
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYDIVLHHLIKAGRTE 202
G P+ T+ ++ +C + + A+ + EM K P+ Y +++ K R +
Sbjct: 124 AGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMD 183
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE-MKARGVLPVMHMYST 261
A + + M + +P V Y +V C + + A + DE M +G P + Y++
Sbjct: 184 RALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTS 243
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
LI C K+ A + + ML+ I+P +S + L G A + ++++ L
Sbjct: 244 LIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETL 302
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 165/330 (50%), Gaps = 14/330 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ Q+LP FN L+D L KSR +A + +++ RF PD +Y L +GW + K+
Sbjct: 170 GIAQDLPLFNSLLDALVKSRRASKAASLVRALEQ-RFPPDAVTYNTLADGWCRVKDTSRA 228
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-----TNCKPSPHIFC 119
++ R+M + G P +Y I++ + + A + F +M+ NCKP +
Sbjct: 229 LDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYT 288
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+++GLG +L +A + F + G +P TYNA++ C + DA + D+M +
Sbjct: 289 TVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRK 348
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN TY +++ L AG+ A + RM + G EP V TY +++R +++
Sbjct: 349 GYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRM-KSEGCEPNVQTYNVLIRYSLEEGEIEK 407
Query: 240 AMRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFS 295
+ +++ M K LP Y+ +I+++ + +D A + EM+D G P +F+
Sbjct: 408 GLDLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRKFMFN 467
Query: 296 NLKQALRDEGMEETA---VVLAQKIDKLRK 322
+ L G +E + + + +K +LR+
Sbjct: 468 RVLNGLMLTGNQELSRELLRMQEKYTRLRR 497
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 11/286 (3%)
Query: 41 FDPDIKSYTILLEGWG--QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDE 98
F P +++ IL E + ++ L++ + G D+ + +++A ++R +
Sbjct: 136 FTP--RTFPILFERFAMSHRRPDLAIRLFLSLHRSHGIAQDLPLFNSLLDALVKSRRASK 193
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
A L R +E P + TL +G K S AL Q + G P TYN ++
Sbjct: 194 AASLVRALE-QRFPPDAVTYNTLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILK 252
Query: 159 AYCWSMRINDAYRMMDEMRKCGIG-----PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
+ S ++ A+ +M++ G P+ +Y VLH L AG+ ++A VF MS
Sbjct: 253 GFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSI 312
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
+ G +P+ +TY ++++ C ++ A+ ++D+M +G +P + Y+ LI LCH K+
Sbjct: 313 E-GCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVV 371
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
A K M G P Q ++ L + +EG E + L + + K
Sbjct: 372 RAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMSK 417
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K +K E +N LI C ++ A D+M +R + +Y +L+
Sbjct: 582 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 641
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM G PDV +Y I+IN HC +A+E+F M + + +
Sbjct: 642 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 701
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + ++ E + F ++ +RG P+ YNA++ ++ S I+ A+ +M EM K
Sbjct: 702 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 761
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ ++ L GR +EA + M+ + G +P + TY ++ + V A
Sbjct: 762 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER-GIQPDLVTYNTLISGYSMKGDVKDA 820
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+RI +EM +G P + Y+ LI LC + DDA +EM++ GI P + +L +
Sbjct: 821 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 880
Query: 301 LRDE 304
L E
Sbjct: 881 LTTE 884
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 3/272 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+ L A E+ ++M + PD+ +Y IL+ G ++ N+
Sbjct: 621 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 680
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G VV+Y +I A + E +LF E +P ++ LIN
Sbjct: 681 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 740
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + A + G+ +K+ P+ TYN ++ C R+++A +++DEM + GI P+
Sbjct: 741 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 800
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ G ++A + M K G PT+ TY +++ C N Q D A +
Sbjct: 801 LVTYNTLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMV 859
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK--LDD 274
EM G+ P Y +LI L ED+ +DD
Sbjct: 860 KEMVENGITPDDSTYISLIEGLTTEDERAIDD 891
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 9/224 (4%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y MK S +++A SA + ++FR + C + F ++ L
Sbjct: 444 LYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFR-LRLPLCTTT---FNIMLRHLC 499
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGIGPNT 185
S + + AL+ Q + P A TYN V+ +C R+ A +M EMR + GI PN
Sbjct: 500 SAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 555
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY V+ K GR +EA VF M K +P Y ++ +C ++D A+ D
Sbjct: 556 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 615
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M RGV + Y+ L+++L + + +A + +EM G+ P
Sbjct: 616 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 659
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 148/306 (48%), Gaps = 2/306 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
DK+G+ + FN LI LCK VE A +VFD+M P++ +YT +L G+ + +L
Sbjct: 150 DKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDL 209
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
++ +V+ E+ D G+ PD +Y +++ +C R +A+++ ME +P+ + +
Sbjct: 210 VNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVM 269
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ EK+ EA + F P + V+ C ++ +A + M +
Sbjct: 270 IDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNC 329
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ ++H L K G+ EA +F + GT P++ TY ++ C +++ A
Sbjct: 330 LPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQ--GTIPSLMTYNTLIAGMCERGELNEAG 387
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R+WD+M + P Y+ LI + + + +EMLD G P ++ L + L
Sbjct: 388 RLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL 447
Query: 302 RDEGME 307
++ GME
Sbjct: 448 QESGME 453
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 146/328 (44%), Gaps = 40/328 (12%)
Query: 29 AQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD-GFEPDVVSYGIM 86
A + F ++K+ P +K LL + Q K + + KD G P+V S+ I+
Sbjct: 105 ALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNIL 164
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
I A C + A+++F EM P+ + T++ G S L A + F + +G+
Sbjct: 165 IKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGW 224
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI---------------- 190
P+A TY ++ YC R++DA ++MD M G+ PN TY +
Sbjct: 225 LPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARN 284
Query: 191 -------------------VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
V+ L + G+ E A ++KRM K P + ++
Sbjct: 285 LIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEK-NCLPDNAIMSTLIHWL 343
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C +V A +++DE + +G +P + Y+TLI +C +L++A + + +M++ RP
Sbjct: 344 CKEGKVWEARKLFDEFE-QGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNA 402
Query: 292 QLFSNLKQALRDEGMEETAV-VLAQKID 318
++ L + G+ + V +L + +D
Sbjct: 403 FTYNMLIKGFMKAGVVKEGVRILEEMLD 430
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 138/327 (42%), Gaps = 21/327 (6%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNL---------LS 63
RLI + +++ A ++FD K F +Y +++ + + LS
Sbjct: 17 RLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLS 76
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
N + + DD F + +YG+ + K + E F + +PS + TL+N
Sbjct: 77 RNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEF------SMQPSVKLLNTLLN 130
Query: 124 GLGSEKRLSEALQFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
KR K K G P ++N ++ A C + +A ++ DEM G+
Sbjct: 131 VFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMI 190
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY +L + G A VF +S K G P +TY +++ +C ++ A++
Sbjct: 191 PNLVTYTTILGGFVSRGDLVNAEKVFSEISDK-GWLPDATTYTVLMVGYCKQGRLSDAIK 249
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D M+ GV P Y +I++ C E K +A +MLD P L + L
Sbjct: 250 VMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLC 309
Query: 303 DEGMEETAVVLAQKIDKLRKTPLVDRG 329
++G E A L +++ L K L D
Sbjct: 310 EDGKVENACHLWKRM--LEKNCLPDNA 334
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 152/291 (52%), Gaps = 1/291 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ F+ LIDTLCK V A++ + M R PD+ ++T L+EG+ +L S
Sbjct: 267 GVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSA 326
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G+EPDV+SY ++I +C +EA++L+ EM P FC L+ G
Sbjct: 327 KELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKG 386
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ +A + FG K + + C + + +A + +E++ + +
Sbjct: 387 LFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLD 446
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+++ ++ L KA + E A+ +F+++S++ G +P V TY I++ FC N QVD A ++
Sbjct: 447 IESFNCLIDGLCKARKLETAWELFEKLSQE-GLQPDVVTYCIMINGFCKNGQVDNANILF 505
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
M+ G P + YS L++ +KL++ K +M+ + +++
Sbjct: 506 QMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYT 556
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 13/299 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL N LI+ LC V + +R + PD+ +YT L++G + +
Sbjct: 121 GLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------EATNCKPSPHIF 118
++ M+ G P+VV+YG +I C + A++L +EM A NCKP+ +
Sbjct: 181 TRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSY 240
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+ L + EA + F + +G P+ T++A++ C + +A + ++ M
Sbjct: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML 300
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
GI P+ T+ ++ G + A +F M K G EP V +Y +++ +C V+
Sbjct: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSK-GYEPDVISYTVLIYGYCKTFNVE 359
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
AM++++EM G P M + L+ L K+ DA K F G+ P + NL
Sbjct: 360 EAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLF------GVVKPHAVPKNL 412
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 152/331 (45%), Gaps = 9/331 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERA----QEVFDKMKKRRFD--PDIKSYTILLEG 54
M K G + + LI LC++ ++ A QE+ + + P+I SY I+++
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ ++ EM D G PDVV++ +I+ C EA + M P
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
F +LI G L A + F +G+EP+ +Y ++ YC + + +A ++ +
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 366
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP-TVSTYEIVVRMFCY 233
EM + G P+ +T+ ++L L AG+ +A +F + KP P + + + C
Sbjct: 367 EMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVV--KPHAVPKNLYICSVFLDGLCK 424
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
N + AM +++E+K+ + + ++ LI+ LC KL+ A + F+++ G++P
Sbjct: 425 NGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVT 484
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ + G + A +L Q +++ TP
Sbjct: 485 YCIMINGFCKNGQVDNANILFQMMEENGCTP 515
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 18/296 (6%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQ--EVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
++ L+ LP F CK ++ Q + FD M + I S+ +LL + K
Sbjct: 55 ERISLQHGLPMFIHN----CKKGNITSTQALQFFDLMMR-----SIISFNLLLGALAKIK 105
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + +Y++M G P+ + I+IN C+ R E + + P +
Sbjct: 106 HYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYT 165
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK- 178
+LI GL E R+SEA + F + +K G P TY ++ C + IN A ++ EM
Sbjct: 166 SLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNG 225
Query: 179 -----CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
PN +Y+I++ L K G+ +EA +F M + G P V T+ ++ C
Sbjct: 226 TSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQ-GVRPDVVTFSALIDTLCK 284
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
V A + + M RG++P + +++LI C LD A + F M G P
Sbjct: 285 EGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEP 340
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 111/228 (48%), Gaps = 5/228 (2%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
++S+ +++ A K Y + L+++M P+ LIN L + R+ E L
Sbjct: 90 SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+RG+ P+ TY +++ C RI++A R+ M+K G PN TY ++ L +
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209
Query: 199 GRTEEAYSVFKRM--SRKP---GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
G A + + M P +P + +Y I++ C + A R+++EM +GV
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + +S LI++LC E + +A K+ + M+ GI P F++L +
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGF 317
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 1/223 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ + LI CK+ +VE A +++++M + PD+K++ +LL+G +
Sbjct: 337 GYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDA 396
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ +K ++ + ++ C EA+ELF E+++ N K F LI+G
Sbjct: 397 KKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDG 456
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++L A + F + + G +P+ TY ++ +C + ++++A + M + G PN
Sbjct: 457 LCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPN 516
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
TY +LH K + EE + +M +K S Y IV
Sbjct: 517 LLTYSALLHGFYKNNKLEEVVKLLHKMIQK-DVSLAASIYTIV 558
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 65/106 (61%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ + +K ++ FN LID LCK+R +E A E+F+K+ + PD+ +Y I++ G+ +
Sbjct: 438 LKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQ 497
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+ + N +++ M+++G P++++Y +++ + +E V+L +M
Sbjct: 498 VDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKM 543
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 153/293 (52%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + N LI LC+ ++++ A EV M + + D +Y I+++G + +
Sbjct: 472 GLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEA 531
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M GF+PD + +I+A+C + +EA+ L +M+ +P + T+I+G
Sbjct: 532 LKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDG 591
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + +A ++ + G +P A YNA++G Y + I+ A ++D M GI P
Sbjct: 592 YCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPT 651
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++H + AG +EA ++F++ SRK E V Y I+++ C ++D AM +
Sbjct: 652 NVTYCSLMHWMCHAGLVDEAKTMFEQ-SRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYF 710
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+EM++R + P Y+TL+ + C ++A K F EM+ GI P ++ L
Sbjct: 711 EEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTL 763
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%), Gaps = 1/281 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + +N +I CK +E A ++ D M ++ F PD + ++ + +
Sbjct: 507 GMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEA 566
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +MK +G +PDVVSYG +I+ +C AK +A E E+ A KP+ I+ LI G
Sbjct: 567 LHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGG 626
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
G +S A+ + G +P TY +++ C + +++A M ++ RK I
Sbjct: 627 YGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVG 686
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y I++ L K G+ +EA + F+ M R P TY ++ +C + + A +++
Sbjct: 687 VVGYTIMIQGLCKIGKMDEAMNYFEEM-RSRSIPPNKITYTTLMYAYCKSGNNEEASKLF 745
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
DEM + G++P Y+TL+ D LD A + E+ I
Sbjct: 746 DEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSI 786
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 1/249 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + FN +I C +E A + +MK PD+ SY +++G+ + K+
Sbjct: 538 MIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKD 597
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ NE E+ G +P+ V Y +I + A+ + ME+ +P+ +C+
Sbjct: 598 IQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCS 657
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ + + EA F QS+K E Y ++ C ++++A +EMR
Sbjct: 658 LMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRS 717
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY +++ K+G EEA +F M G P +Y +V F +D A
Sbjct: 718 IPPNKITYTTLMYAYCKSGNNEEASKLFDEMV-SSGIVPDNVSYNTLVTGFSQVDSLDKA 776
Query: 241 MRIWDEMKA 249
+ E+ +
Sbjct: 777 IEKAAEISS 785
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 125/318 (39%), Gaps = 41/318 (12%)
Query: 11 PDFNRLIDTLCKSR---HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
P + LI+T S + A + F + RR P +K+ LLE + NL + +V
Sbjct: 156 PSSDLLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKV 215
Query: 68 YREMKD-------------------------DGFE-------------PDVVSYGIMINA 89
+ EM+D DGF+ V Y ++++A
Sbjct: 216 FDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDA 275
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C + R DEA+ L ME + PS F LINGL R E + + G P
Sbjct: 276 LCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPN 335
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
N ++ +C +A R+ DEM + TY+++ L K G E A + +
Sbjct: 336 EVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILE 395
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M T + +V + +++ +R+ EM RG+ P + + LC
Sbjct: 396 EMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQG 455
Query: 270 DKLDDACKYFQEMLDIGI 287
+ +A + +ML+ G+
Sbjct: 456 RRHQEAVGIWLKMLEKGL 473
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 144/367 (39%), Gaps = 76/367 (20%)
Query: 5 GLKQE---LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
GL+Q +P +N L+D LCKS V+ A + +M++ R P + ++ IL+ G +
Sbjct: 259 GLQQSAGAVP-YNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRF 317
Query: 62 LSMNEVYREMKDDGFEPD-----------------------------------VVSYGIM 86
+ + REM+ G P+ V+Y ++
Sbjct: 318 GEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLI 377
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK-RLSEALQFFGQSKKRG 145
A C + A + EM +T +F +++ GL RL ++ + KRG
Sbjct: 378 ARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRG 437
Query: 146 FEPE-----------------------------------APTYNAVVGAYCWSMRINDAY 170
+P T NA++ C + A
Sbjct: 438 MKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGAT 497
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++ M G+ + TY+I++ K + EEA + M RK G +P + ++
Sbjct: 498 EVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRK-GFKPDAYMFNSIIHA 556
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+C +++ A+ + +MK GV P + Y T+I+ C + A +Y E++ G++P
Sbjct: 557 YCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPN 616
Query: 291 GQLFSNL 297
+++ L
Sbjct: 617 AVIYNAL 623
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
PS + + L A+ F R P T NA++ A + + ++
Sbjct: 156 PSSDLLINTCVTSSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKV 215
Query: 173 MDEMRKC-GIGPNTRTYDIVLHHLIKAGRTEEAYSVFK-----RMSRKPGTEPTVSTYEI 226
DEMR C + PN +Y ++ L K G+ ++ + + + + G P Y +
Sbjct: 216 FDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVP----YNL 271
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ C + +VD A+R+ M+ V P M + LIN L D+ + +EM +G
Sbjct: 272 LMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLG 331
Query: 287 IRP 289
I P
Sbjct: 332 ITP 334
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K +K E +N LI C ++ A D+M +R + +Y +L+
Sbjct: 577 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 636
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM G PDV +Y I+IN HC +A+E+F M + + +
Sbjct: 637 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 696
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + ++ E + F ++ +RG P+ YNA++ ++ S I+ A+ +M EM K
Sbjct: 697 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 756
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ ++ L GR +EA + M+ + G +P + TY ++ + V A
Sbjct: 757 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER-GIQPDLVTYNTLISGYSMKGDVKDA 815
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+RI +EM +G P + Y+ LI LC + DDA +EM++ GI P + +L +
Sbjct: 816 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 875
Query: 301 LRDE 304
L E
Sbjct: 876 LTTE 879
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 129/272 (47%), Gaps = 3/272 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+ L A E+ ++M + PD+ +Y IL+ G ++ N+
Sbjct: 616 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 675
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G VV+Y +I A + E +LF E +P ++ LIN
Sbjct: 676 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 735
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + A + G+ +K+ P+ TYN ++ C R+++A +++DEM + GI P+
Sbjct: 736 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPD 795
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ G ++A + M K G PT+ TY +++ C N Q D A +
Sbjct: 796 LVTYNTLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMV 854
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK--LDD 274
EM G+ P Y +LI L ED+ +DD
Sbjct: 855 KEMVENGITPDDSTYISLIEGLTTEDERAIDD 886
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 9/224 (4%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y MK S +++A SA + ++FR + C + F ++ L
Sbjct: 439 LYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFR-LRLPLCTTT---FNIMLRHLC 494
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGIGPNT 185
S + + AL+ Q + P A TYN V+ +C R+ A +M EMR + GI PN
Sbjct: 495 SAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 550
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY V+ K GR +EA VF M K +P Y ++ +C ++D A+ D
Sbjct: 551 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 610
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M RGV + Y+ L+++L + + +A + +EM G+ P
Sbjct: 611 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 654
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 147/322 (45%), Gaps = 37/322 (11%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++ TL K++ V+ A+EVF +M+K F PD +Y +++G + + +V M
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P V+YGI++N+ C A + A ELFR M A+ +P+ I+ +LI+G R+ EA
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + + G+ P+ T+ ++ C S A + +EM + G PN TY ++ L
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K GR A+ + K M G P TY ++ FC ++D A ++ DE+ P
Sbjct: 411 SKIGRVANAFRIMKGMIAH-GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPN 469
Query: 256 MHMYSTLIN------------------------------------SLCHEDKLDDACKYF 279
+ +YS+L+ LC +LD+AC+ F
Sbjct: 470 LQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIF 529
Query: 280 QEMLDIGIRPPGQLFSNLKQAL 301
Q M+ G +P ++ L L
Sbjct: 530 QRMVSEGCKPDATTYNILINGL 551
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 2/306 (0%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRF-DPDIKSYTILLEGWGQQKNLLSMN 65
K +L F L+D LCK+ E+A EVF +M F PD +T ++ + K +
Sbjct: 186 KPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAR 245
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
EV+ +M+ GF PD ++Y MI+ A EA+++ M A C P+ + L+N L
Sbjct: 246 EVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSL 305
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
L A + F GF P + Y +++ + S R+ +A + DEM + G P+
Sbjct: 306 CKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDV 365
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T+ +++ L K+G E+A F+ M R G +P V TY +++ +V A RI
Sbjct: 366 ITHTVMIDGLCKSGNFEQAAKSFEEMMRG-GCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M A G P Y L++ C +LD+A + E+ P QL+S+L + L D G
Sbjct: 425 GMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGG 484
Query: 306 MEETAV 311
E +
Sbjct: 485 SVENTL 490
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 169/397 (42%), Gaps = 74/397 (18%)
Query: 1 MDKFGLKQELPDFNRLID-----------------------------------TLCKSRH 25
M+K G + +N +ID +LCK+
Sbjct: 251 MEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGT 310
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+ERA+E+F M F P+ YT L+ G+ + + ++ EM + G+ PDV+++ +
Sbjct: 311 LERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTV 370
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
MI+ C + +++A + F EM CKP+ + T+I GL R++ A + G
Sbjct: 371 MIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD---------------- 189
P++ TY ++ +C R+++A +++DE+ KC PN + Y
Sbjct: 431 CFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTL 490
Query: 190 --------------------IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
++ L K GR +EA +F+RM + G +P +TY I++
Sbjct: 491 DDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE-GCKPDATTYNILIN 549
Query: 230 MFCYNAQ--VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
C + + V+ A + +++ G LP Y+ L LC ++D A K +E G
Sbjct: 550 GLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGW 609
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++ L L +G + AV L Q++ + P
Sbjct: 610 NADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 147/305 (48%), Gaps = 2/305 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
++ G + ++ +N L++ L ++ + + ++M K P+ S+ IL+ + + +
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCT 120
+ MK +PD+ ++ I+++ C A ++A E+F EM A P +
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ L KR+ EA + FGQ +K GF P+A YN ++ + +A +++D M
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY I+++ L KAG E A +F+ M+ G P Y ++ F + ++ A
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMA-ASGFRPNSVIYTSLIHGFAKSGRMKEA 349
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++DEM G P + ++ +I+ LC + A K F+EM+ G +P ++ + Q
Sbjct: 350 CSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQG 409
Query: 301 LRDEG 305
L G
Sbjct: 410 LSKIG 414
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 10/293 (3%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR------ 69
+I LCK+ ++ A +F +M PD +Y IL+ G + + N V R
Sbjct: 512 IIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE----NRVERAFALLH 567
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+++ G+ PD V+Y + C D AV++ E + + L GL +
Sbjct: 568 DLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ A+ F + ++G P+A Y ++ ++ DA + DEM G P TY
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYT 687
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ L AG +EA+ F+ M + +V Y+ ++ FC +VD A++++++M +
Sbjct: 688 ALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
RG +P ++L + L K + A + QEM G P F+ + LR
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLR 800
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L LCK V+RA ++ ++ R ++ D+ +YT L G Q +
Sbjct: 575 LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVS 634
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++EM G PD +Y +IN K+ ++A + F EM KP+ + L+ L
Sbjct: 635 LFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALC 694
Query: 127 SEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ EA F RG Y+A++ +C +++++ A ++ ++M G P
Sbjct: 695 HAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTA 754
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
T + L+++G+TE+A + + M+ G+ P +T+ ++
Sbjct: 755 VTSASLFDGLVRSGKTEKAQELLQEMA-AGGSPPHAATFTAIL 796
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 1/195 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + L LC V+RA +F +M ++ PD +Y ++ G + K L
Sbjct: 608 GWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDA 667
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCTLIN 123
+ + EM G +P V +Y ++ A C A DEA F M A S I+ LI+
Sbjct: 668 CKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIH 727
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G ++ AL+ F RG P A T ++ S + A ++ EM G P
Sbjct: 728 GFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPP 787
Query: 184 NTRTYDIVLHHLIKA 198
+ T+ +L L K+
Sbjct: 788 HAATFTAILDGLRKS 802
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 153/304 (50%), Gaps = 2/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G++ + +N LI LC A + M +R+ +P++ +++ L++ + ++
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++Y EM +PD+ +Y +IN C R DEA +F M + +C P+ + T
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ E ++ F + +RG TY ++ + + ++A + +M G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G+ E A VF+ + R EP + TY I++ C +V+
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK-MEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+T+++ C + ++A F+EM + G P ++ L +A
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 301 -LRD 303
LRD
Sbjct: 581 HLRD 584
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 162/358 (45%), Gaps = 34/358 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + ++ N L++ C + A + +M + + PD ++ L+ G +
Sbjct: 142 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNR 201
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G +PD+V+YGI++N C D A+ L ++ME +P I+ T
Sbjct: 202 ASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L + K +++AL F + +G P TYN+++ C R +DA R++ +M +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP------------------------- 215
I PN T+ ++ +K G+ EA ++ M ++
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 216 ---------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
P V TY +++ FC +VD M ++ EM RG++ Y+TLI+
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ D+A F++M+ G+ P +S L L + G ETA+V+ + + + + P
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEP 499
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ L ++ LI+ C+ + A V KM K ++PDI + LL G+
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M + G++PD ++ +I+ R EAV L M C+P +
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + AL + ++ EP YN ++ A C +NDA + EM G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ L GR +A + M + P V T+ ++ F ++ A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEA 345
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++DEM R + P + YS+LIN C D+LD+A F+ M+ P ++ L +
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 301 L-----RDEGME 307
DEGME
Sbjct: 406 FCKAKRVDEGME 417
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 6/293 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
NRL D ++ A +F M K R P I ++ LL + + + +M+
Sbjct: 54 INRLNDL-----KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G ++ +Y I+IN C + A+ + +M +P +L+NG R+S
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ GQ + G++P++ T+N ++ R ++A ++D M G P+ TY IV+
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K G + A S+ K+M + EP V Y ++ C V+ A+ ++ EM +G+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGK-IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + Y++LI LC+ + DA + +M++ I P FS L A EG
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +L +A+ FG K P ++ ++ A + + + ++M+ GI N
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I+++ + + A +V +M K G EP + T ++ FC+ ++ A+ + +
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G P ++TLI+ L ++ +A M+ G +P + + L G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 307 EETAVVLAQKIDKLRKTPLV 326
+ A+ L +K+++ + P V
Sbjct: 237 IDLALSLLKKMEQGKIEPGV 256
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 163/333 (48%), Gaps = 42/333 (12%)
Query: 8 QELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
+E+P +N LI LCK+ A ++ ++M PDI +YT L+ G+ + K
Sbjct: 49 EEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDA 108
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFCTLIN 123
V+ ++ GF PDVV+Y +I+ C R EA++LF R +++ +C P+ + +LI+
Sbjct: 109 LRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLIS 168
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G ++ EA+ + + G P+ TY ++ +C R++DAY ++++M + G+ P
Sbjct: 169 GFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 228
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY------------------- 224
N T+ ++ L + R +A + M RK PTV TY
Sbjct: 229 NVVTFTSLMDGLCRENRLSDAVHILGEMRRK-SCSPTVYTYNTILDGYCRVNQLEEARKF 287
Query: 225 --------------EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
I++R C + AM + +E + R P + MY+T+I+ LC E
Sbjct: 288 MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREK 347
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
K+D+AC+ +++ML+ PG L +++ + D
Sbjct: 348 KVDEACRVYRKMLE----EPGCLPNSITYSTFD 376
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 5/260 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + ++ ++ LID LCK ++ A ++F +M K P+ +Y L+ G+ + +
Sbjct: 119 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 178
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ M + G PDVV+Y ++N C R D+A +L +M P+ F +L++
Sbjct: 179 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMD 238
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL E RLS+A+ G+ +++ P TYN ++ YC ++ +A + M E C P
Sbjct: 239 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMDC--PP 296
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N +++I++ L K R+ EA + + +R+ P V Y V+ + C +VD A R+
Sbjct: 297 NVVSFNIMIRGLCKVNRSSEAMELVEE-ARRRRCNPDVVMYTTVIDVLCREKKVDEACRV 355
Query: 244 WDEM-KARGVLPVMHMYSTL 262
+ +M + G LP YST
Sbjct: 356 YRKMLEEPGCLPNSITYSTF 375
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 126/243 (51%), Gaps = 3/243 (1%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P V+Y +I+ C A+R EA +L EM + C P + TLI G K+ +AL+
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYDIVLHHLI 196
F Q RGF P+ TY+ ++ C R+ +A + M K G PNT TY+ ++
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
+ G+ +EA ++ +RM+ + G+ P V TY ++ FC A++D A + ++M +G+ P +
Sbjct: 172 RMGKMDEAMNLLERMA-ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN-LKQALRDEGMEETAVVLAQ 315
+++L++ LC E++L DA EM P ++ L R +EE + +
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290
Query: 316 KID 318
++D
Sbjct: 291 EMD 293
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%)
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ + +LI+GL +R SEA + G P+ TY ++ +C S + +DA R+
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+++ G P+ TY ++ L K GR +EA +F RM + P TY ++ FC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
++D AM + + M G P + Y+TL+N C +LDDA +M G+ P
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 293 LFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F++L L E AV + ++ + +P V
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 265
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 96/189 (50%), Gaps = 3/189 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ + L++ CK ++ A ++ ++M ++ P++ ++T L++G ++
Sbjct: 186 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENR 245
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EM+ P V +Y +++ +C + +EA + +E +C P+ F
Sbjct: 246 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNI 303
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKC 179
+I GL R SEA++ ++++R P+ Y V+ C ++++A R+ +M +
Sbjct: 304 MIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEP 363
Query: 180 GIGPNTRTY 188
G PN+ TY
Sbjct: 364 GCLPNSITY 372
>gi|125542844|gb|EAY88983.1| hypothetical protein OsI_10467 [Oryza sativa Indica Group]
Length = 525
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 155/316 (49%), Gaps = 5/316 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G QE FN L+ TLC+ + + A+ V+ +K F + +++ ILL GW K+
Sbjct: 174 GDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYE-FKVNRQTFNILLSGW---KSAEDA 229
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM++ G EPD+V+Y +I+ HC + + A +L EM + P + +LI G
Sbjct: 230 EAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGG 289
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
LG + +A + + G P+ P YN + + + R+ DA+ +M+EM G+ PN
Sbjct: 290 LGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPN 349
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY++ A A+ +++RM R G P + +VR+ + +V A+ +W
Sbjct: 350 ATTYNLFFRCYYWAYDIGSAWQLYERM-RSEGCFPNTQSCMFIVRLCHRHGRVAQALELW 408
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M G + L + LC E KLD+A + F +M+++G +P F +K ++
Sbjct: 409 SDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLA 468
Query: 305 GMEETAVVLAQKIDKL 320
EE+ L ++ +
Sbjct: 469 NREESIARLTAQMAQF 484
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
C++ + S +RLS L + RG + E +NA++ C ++DA + + K
Sbjct: 154 CSVRETVDSFRRLSRML------RGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHAL-K 206
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
N +T++I L+ ++ E F R+ G EP + TY ++ C N V+
Sbjct: 207 YEFKVNRQTFNI----LLSGWKSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVE 262
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A ++ DEM+ + + P + Y++LI L + D A +EM ++G P
Sbjct: 263 NAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYP 313
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 94/248 (37%), Gaps = 35/248 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI--------------- 45
M + G++ +L +N LID CK+R VE A ++ D+M+++ PD+
Sbjct: 236 MRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQ 295
Query: 46 --------------------KSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+Y + + K L + EM G P+ +Y +
Sbjct: 296 PDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNL 355
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+ A A +L+ M + C P+ ++ R+++AL+ + G
Sbjct: 356 FFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNG 415
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F + + C ++++A R +M + G P+ + + + A R E
Sbjct: 416 FGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLANREESIA 475
Query: 206 SVFKRMSR 213
+ +M++
Sbjct: 476 RLTAQMAQ 483
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 162/345 (46%), Gaps = 36/345 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG + +N ++D L K R ++ A+++ MK + P+ +Y +L+ G+ +
Sbjct: 239 MSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGL 298
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +V M + P V +Y +++N C+ + DEA + EME N P + T
Sbjct: 299 LKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNT 358
Query: 121 LING-----------------------------------LGSEKRLSEALQFFGQSKKRG 145
LI+G + + ++EA + ++ G
Sbjct: 359 LIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENG 418
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ TYN ++GAYC + ++ A+RMMDEM G+ +T T + +LH L + +EAY
Sbjct: 419 LSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAY 478
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ S++ VS Y I++ + + + D A+ +WDEMK R ++P Y+++I
Sbjct: 479 NLLCSASKRGYILDEVS-YGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGG 537
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
LC K+D A EML+ G+ P ++ + EG E A
Sbjct: 538 LCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKA 582
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 153/340 (45%), Gaps = 36/340 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + ++ +N LID + R + ++M K+ + +Y I+L+ ++ N
Sbjct: 344 MEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGN 403
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +M+++G PD V+Y +I A+C A + +A + EM + K T
Sbjct: 404 MTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNT 463
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGF---------------------------------- 146
+++ L EK+L EA + KRG+
Sbjct: 464 ILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQ 523
Query: 147 -EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P TYN+V+G C S +++ A ++EM + G+ P+ TY+I++H G E+A+
Sbjct: 524 IMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAF 583
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
M +P V T I++R C ++ A+++++ + ++G + Y+T+I+S
Sbjct: 584 QFHNEMIENL-FKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISS 642
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC E K ++A EM + P + + AL D G
Sbjct: 643 LCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAG 682
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 136/291 (46%), Gaps = 4/291 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCK---SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M + + L N L+++L + S + A++V K P+ S+ IL+ G+
Sbjct: 166 MKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCL 225
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + + +M + G PD VSY +++A + EA +L +M++ P+ H
Sbjct: 226 ESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHT 285
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L+ G L EA + + P TYN +V +C +I++A+R+ DEM
Sbjct: 286 YNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEME 345
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K + P+ TY+ ++ + + E YS+ + M +K G + TY I+++ C +
Sbjct: 346 KMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKK-GVKCNAVTYNIILKWMCKKGNM 404
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
A D+M+ G+ P Y+TLI + C K+ A + EM G++
Sbjct: 405 TEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 138/287 (48%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL + +N LI CK+ + +A + D+M + D + +L +K
Sbjct: 414 MEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKK 473
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + G+ D VSYGI+I + ++ D A+ L+ EM+ PS + +
Sbjct: 474 LDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNS 533
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL +++ +A+ + + G P+ TYN ++ +C + A++ +EM +
Sbjct: 534 VIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENL 593
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T +I+L L + G E+A +F + K G + V TY ++ C + + A
Sbjct: 594 FKPDVYTCNILLRGLCREGMLEKALKLFNTLVSK-GKDIDVVTYNTIISSLCKEGKFENA 652
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ EM+A+ + P + Y +I +L ++ +A ++ +M++ GI
Sbjct: 653 YDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 31/284 (10%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
+RA ++D+MK+R+ P +Y ++ G Q + + + EM ++G PD +Y I+
Sbjct: 510 DRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNII 569
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
I+ C ++A + EM KP + L+ GL E L +AL+ F +G
Sbjct: 570 IHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGK 629
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+ + TYN ++ + C + +AY ++ EM +GP+ TY +++ L AGR +EA
Sbjct: 630 DIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEE 689
Query: 207 VFKRM---------SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
+M + K G V T E V F + +
Sbjct: 690 FTLKMVESGIVHDQNLKLGKGQNVLTSE-VSEHFDFKSIA-------------------- 728
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
YS IN LC++ K DA F E+ G+ + NL + L
Sbjct: 729 -YSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGL 771
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 117/229 (51%), Gaps = 10/229 (4%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRY--DEAVELFREMEATNCK----PSPHIFC 119
+++ +MK + P++++ ++N S RY ++ L R++ + K P+ + F
Sbjct: 161 QIFNKMKRLNYRPNLLTCNTLMN---SLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFN 217
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI G E ++ +AL + + + G P+ +YN ++ A + +A ++ +M+
Sbjct: 218 ILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSK 277
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PN TY++++ + G +EA V + M+R PTV TY ++V FC + ++D
Sbjct: 278 GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRN-NLLPTVWTYNMLVNGFCNDGKIDE 336
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
A RI DEM+ VLP + Y+TLI+ + +EM G++
Sbjct: 337 AFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVK 385
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 39/224 (17%)
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT------------------- 152
+PS + T I + A Q F + K+ + P T
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL 196
Query: 153 -------------------YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+N ++ YC ++ DA +++M + G P+T +Y+ +L
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+K +EA + M K G P TY ++V +C + A ++ + M +L
Sbjct: 257 ALLKRRLLQEARDLLLDMKSK-GLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLL 315
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P + Y+ L+N C++ K+D+A + EM + + P ++ L
Sbjct: 316 PTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTL 359
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 149/289 (51%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + ++ LI LC A + M +R+ +P++ ++ L++ + ++
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ ++Y EM +PD+ +Y +IN C R DEA +F M + +C P+ + T
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING KR+ E ++ F + +RG TY ++ + + ++A + +M G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +L L K G+ E+A VF+ + R EPT+ TY I++ C +V+
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ + +GV P + +Y+T+I+ C + ++A F++M + G P
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 160/323 (49%), Gaps = 15/323 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL------EGWGQQKNLLSMNE 66
++ +ID+LCK RH + A +F +M+ + P++ +Y+ L+ E W LLS
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS--- 319
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+M + P+VV++ +I+A + EA +L+ EM + P + +LING
Sbjct: 320 ---DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL EA F + P TYN ++ +C + RI++ + EM + G+ NT
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++H +A + A VFK+M G P + TY ++ C N +++ AM +++
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
++ + P ++ Y+ +I +C K++D F + G++P +++ + +G+
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 307 EETAVVLAQKIDKLRKTPLVDRG 329
+E A L +K+ + PL D G
Sbjct: 556 KEEADALFRKMRE--DGPLPDSG 576
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 160/326 (49%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + F LI L A + D+M +R P++ +Y +++ G ++ +
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M+ E +VV Y +I++ C + D+A+ LF EME +P+ + +
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + +R S+A + +R P T+NA++ A+ ++ +A ++ DEM K
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY +++ R +EA +F+ M K P V TY ++ FC ++D
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVTYNTLINGFCKAKRIDEG 419
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ EM RG++ Y+TLI+ D+A F++M+ G+ P ++ L
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L G E A+V+ + + + + P +
Sbjct: 480 LCKNGKLEKAMVVFEYLQRSKMEPTI 505
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 150/336 (44%), Gaps = 41/336 (12%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+FN+L+ + K + + + +KM++ ++ +Y IL+ + ++ + + +M
Sbjct: 87 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 146
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G+EP +V+ ++N +C KR +AV L +M +P F TLI+GL +
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
SEA+ + +RG +P TY VV C I+ A+ ++++M I N Y V
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------------------- 232
+ L K ++A ++F M K G P V TY ++ C
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 233 -------YNAQVDM---------AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+NA +D A +++DEM R + P + YS+LIN C D+LD+A
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 277 KYFQEMLDIGIRPPGQLFSNL-----KQALRDEGME 307
F+ M+ P ++ L K DEG+E
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 1/294 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
D+ ++ S ++ A +F M K R P I + LL + K + + +M
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G ++ +Y I+IN C + A+ L +M +PS +L+NG KR+
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
S+A+ Q + G+ P+ T+ ++ + ++A ++D M + G PN TY +V
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ L K G + A+++ +M E V Y V+ C D A+ ++ EM+ +G
Sbjct: 232 VNGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
V P + YS+LI+ LC+ ++ DA + +M++ I P F+ L A EG
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 93/175 (53%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ CK++ ++ E+F +M +R + +YT L+ G+ Q ++ + V+++M
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG P++++Y +++ C + ++A+ +F ++ + +P+ + + +I G+ ++
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 522
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+ F +G +P+ YN ++ +C +A + +MR+ G P++ T
Sbjct: 523 DGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 1/174 (0%)
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
R F + Y ++ SM+++DA + M K P+ ++ +L + K + +
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
S+ ++M R G + TY I++ FC +Q+ +A+ + +M G P + S+L+
Sbjct: 104 VISLGEKMQR-LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
N CH ++ DA +M+++G RP F+ L L AV L ++
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LI ++R + AQ VF +M P+I +Y LL+G +
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V+ ++ EP + +Y IMI C A + ++ +LF + KP I+ T
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+I+G + EA F + ++ G P++ T
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L NGL S K L +A+ FG K P +N ++ A + + + ++M++ G
Sbjct: 57 LRNGLHSMK-LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I N TY+I+++ + + A ++ +M K G EP++ T ++ +C+ ++ A
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + D+M G P ++TLI+ L +K +A M+ G +P + +
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 301 LRDEGMEETAVVLAQKID 318
L G + A L K++
Sbjct: 235 LCKRGDIDLAFNLLNKME 252
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 156/318 (49%), Gaps = 4/318 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KF + + LI H + +F +M++ ++P + +T L+ G+ ++
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S + EMK + D+V Y + I++ + D A + F E+EA KP + +
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L RL EA++ F +K P YN ++ Y + + ++AY +++ R G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y+ +L L K G+ +EA VF+ M K P +STY I++ M C ++D A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALRVFEEM--KKDAAPNLSTYNILIDMLCRAGKLDCA 396
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL-FSNLKQ 299
+ D M+ G+ P + + +++ LC KLD+AC F++M D + P ++ F +L
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQM-DYKVCTPDEITFCSLID 455
Query: 300 ALRDEGMEETAVVLAQKI 317
L G + A + +K+
Sbjct: 456 GLGKVGRVDDAYKIYEKM 473
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 141/282 (50%), Gaps = 5/282 (1%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFD---KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
P N I+ + + +E FD M+K +F P +YT L+ + + M +
Sbjct: 131 PSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTL 190
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+++M++ G+EP V + +I R D A+ L EM++++ ++ I+ G
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
++ A +FF + + G +P+ TY +++G C + R+++A M + + K P T
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y+ ++ AG+ +EAYS+ +R R G+ P+V Y ++ +VD A+R+++EM
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLER-QRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
K + P + Y+ LI+ LC KLD A + M G+ P
Sbjct: 370 K-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFP 410
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 161/324 (49%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + N ++D LCKS+ ++ A +F++M + PD ++ L++G G+
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++Y +M D + + Y +I + R ++ +++++M NC P + T
Sbjct: 463 VDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNT 522
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + + F + K R F P+A +Y+ ++ + N+ Y + M++ G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+TR Y+IV+ K G+ +AY + + M K G EPTV TY V+ ++D A
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++E K++ + + +YS+LI+ ++D+A +E++ G+ P +++L A
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDA 701
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L A+V Q + +L+ TP
Sbjct: 702 LVKAEEINEALVCFQSMKELKCTP 725
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ LI L K+ E+F MK++ D ++Y I+++G+ + + +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EMK GFEP VV+YG +I+ R DEA LF E ++ + + I+ +LI+G G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA + ++G P T+N+++ A + IN+A M++ PN
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I+++ L K + +A+ ++ M +K G +P+ +Y ++ + A ++D
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEG 305
KA G +P Y+ +I L + ++ DA F+E G+ + L L +++
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDC 847
Query: 306 MEETAVVLA 314
+E+ A+V A
Sbjct: 848 LEQAAIVGA 856
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 161/349 (46%), Gaps = 37/349 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ L K V+ A VF++MKK P++ +Y IL++ + L E+ M+
Sbjct: 346 YNCILTCLRKMGKVDEALRVFEEMKKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQ 404
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V + IM++ C +++ DEA +F +M+ C P FC+LI+GLG R+
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM-------------------M 173
+A + + + + Y +++ + R D +++ M
Sbjct: 465 DAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYM 524
Query: 174 DEMRKCG----------------IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
D M K G P+ R+Y I++H LIKAG E Y +F M ++ G
Sbjct: 525 DCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSM-KEQGC 583
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
Y IV+ FC +V+ A ++ +EMK +G P + Y ++I+ L D+LD+A
Sbjct: 584 VLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYM 643
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+E I ++S+L G + A ++ +++ + TP V
Sbjct: 644 LFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNV 692
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 108/210 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + +ID L K ++ A +F++ K +R + ++ Y+ L++G+G+ +
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA 676
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ E+ G P+V ++ +++A A+ +EA+ F+ M+ C P+ + LING
Sbjct: 677 YLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILING 736
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ ++A F+ + +K+G +P +Y ++ + I +A + D + G P+
Sbjct: 737 LCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+ Y+ ++ L R +A+S+F+ R+
Sbjct: 797 SACYNAMIEGLSNGNRAMDAFSLFEETRRR 826
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 140/310 (45%), Gaps = 4/310 (1%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI-KSYTILLEGWGQQKNLLSMNEVYR 69
P+F +I L + + V RA E F ++R P +SY LL + +N +++++
Sbjct: 65 PEF--VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILG 122
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM GF P V + M+ + A + E ++ + M +P+ + TLI +
Sbjct: 123 EMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVN 182
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
L F Q ++ G+EP + ++ + R++ A ++DEM+ + + Y+
Sbjct: 183 HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN 242
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+ + K G+ + A+ F + G +P TY ++ + C ++D A+ +++ ++
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEAN-GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+P + Y+T+I K D+A + G P ++ + LR G +
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 310 AVVLAQKIDK 319
A+ + +++ K
Sbjct: 362 ALRVFEEMKK 371
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 108/232 (46%), Gaps = 2/232 (0%)
Query: 94 KRYDEAVELFREMEA-TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
K + A+E FR E T P + +L+ + + Q G+ GF P T
Sbjct: 76 KDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNT 135
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
+V + + ++ + + ++ MRK P Y ++ ++ ++F++M
Sbjct: 136 CIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM- 194
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
++ G EPTV + ++R F +VD A+ + DEMK+ + + +Y+ I+S K+
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV 254
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
D A K+F E+ G++P ++++ L + AV + + ++K R+ P
Sbjct: 255 DMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N L+D L K+ + A F MK+ + P+ +Y IL+ G + +
Sbjct: 687 GLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++EM+ G +P +SY MI+ A EA LF +A P + +I G
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
L + R +A F ++++RG T
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLHIHNKT 834
>gi|15233088|ref|NP_191695.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264589|sp|Q9M2C8.1|PP291_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g61360
gi|6850903|emb|CAB71066.1| putative protein [Arabidopsis thaliana]
gi|25054868|gb|AAN71923.1| unknown protein [Arabidopsis thaliana]
gi|332646669|gb|AEE80190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 498
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 148/278 (53%), Gaps = 14/278 (5%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
KFG+ + FN L+ C R ++ A+ +F+K+ R F+PD+K+ ILL G+ + ++
Sbjct: 173 KFGVDE----FNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLLGFKEAGDVT 227
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ Y EM GF+P+ V+YGI I+ C + + EA+ LF +M+ + + I TLI
Sbjct: 228 ATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLI 287
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G G + +A Q F + KRG P+ YNA++ + ++ A ++M EM + GI
Sbjct: 288 HGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIE 347
Query: 183 PNTRTYDIVLHHLIKAGR-----TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
P++ T+ + ++K+ E Y K S P T PT+ +++++FC+N +V
Sbjct: 348 PDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKT-PTIV---MLMKLFCHNGEV 403
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
++ + +W M +G P H L +LC + +DA
Sbjct: 404 NLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDA 441
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 2/207 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K + ID CK R+ A +F+ M + FD ++ T L+ G G +N
Sbjct: 236 MVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARN 295
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ E+ G PD +Y ++++ A+++ +EME +P F +
Sbjct: 296 KIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHS 355
Query: 121 LINGLGSEKR--LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+ G+ K + +++ + K+R P+ PT ++ +C + +N + M +
Sbjct: 356 MFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLE 415
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAY 205
G P+ +++ L R +A+
Sbjct: 416 KGYCPHGHALELLTTALCARRRANDAF 442
>gi|115451461|ref|NP_001049331.1| Os03g0208600 [Oryza sativa Japonica Group]
gi|26006498|gb|AAN77307.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706773|gb|ABF94568.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547802|dbj|BAF11245.1| Os03g0208600 [Oryza sativa Japonica Group]
Length = 531
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 155/316 (49%), Gaps = 5/316 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G QE FN L+ TLC+ + + A+ V+ +K F + +++ ILL GW K+
Sbjct: 180 GDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYE-FKVNRQTFNILLSGW---KSAEDA 235
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM++ G EPD+V+Y +I+ HC + + A +L EM + P + +LI G
Sbjct: 236 EAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGG 295
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
LG + +A + + G P+ P YN + + + R+ DA+ +M+EM G+ PN
Sbjct: 296 LGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPN 355
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY++ A A+ +++RM R G P + +VR+ + +V A+ +W
Sbjct: 356 ATTYNLFFRCYYWAYDIGSAWQLYERM-RSEGCFPNTQSCMFIVRLCHRHGRVAQALELW 414
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M G + L + LC E KLD+A + F +M+++G +P F +K ++
Sbjct: 415 SDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLA 474
Query: 305 GMEETAVVLAQKIDKL 320
EE+ L ++ +
Sbjct: 475 NREESIARLTAQMAQF 490
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
C++ + S +RLS L + RG + E +NA++ C ++DA + + K
Sbjct: 160 CSVRETVDSFRRLSRML------RGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHAL-K 212
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
N +T++I L+ ++ E F R+ G EP + TY ++ C N V+
Sbjct: 213 YEFKVNRQTFNI----LLSGWKSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVE 268
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A ++ DEM+ + + P + Y++LI L + D A +EM ++G P
Sbjct: 269 NAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYP 319
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 94/248 (37%), Gaps = 35/248 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI--------------- 45
M + G++ +L +N LID CK+R VE A ++ D+M+++ PD+
Sbjct: 242 MRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQ 301
Query: 46 --------------------KSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+Y + + K L + EM G P+ +Y +
Sbjct: 302 PDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNL 361
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+ A A +L+ M + C P+ ++ R+++AL+ + G
Sbjct: 362 FFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNG 421
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F + + C ++++A R +M + G P+ + + + A R E
Sbjct: 422 FGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLANREESIA 481
Query: 206 SVFKRMSR 213
+ +M++
Sbjct: 482 RLTAQMAQ 489
>gi|7340725|emb|CAB82968.1| putative protein [Arabidopsis thaliana]
Length = 308
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 144/277 (51%), Gaps = 1/277 (0%)
Query: 40 RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
RF P++ +YT+LL GW + +NL+ ++ +M D G +PD+V++ +M+ + + +A
Sbjct: 2 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 61
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
++LF M++ P+ + +I + + A+++F G +P+A Y ++
Sbjct: 62 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 121
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+ +++ Y ++ EM++ G P+ +TY+ ++ + E ++ +M + EP
Sbjct: 122 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNE-IEP 180
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
++ T+ ++++ + +M +WDEM +G+ P + Y+ LI L E K +AC+Y
Sbjct: 181 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 240
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
+EMLD G++ P ++ G E LAQ+
Sbjct: 241 EEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQR 277
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 105/217 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK ++ N +++ L +S A ++F MK + P+++SYTI++ + +Q ++ +
Sbjct: 37 GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 96
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + +M D G +PD Y +I + K+ D EL +EM+ P + LI
Sbjct: 97 IEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKL 156
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++K + + + + EP T+N ++ +Y + + DEM K GI P+
Sbjct: 157 MANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD 216
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+Y +++ LI G++ EA + M K P +
Sbjct: 217 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 253
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F P TY ++ +C + +A R+ ++M G+ P+ ++++L L+++ + +A
Sbjct: 3 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 62
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F M K G P V +Y I++R FC + ++ A+ +D+M G+ P +Y+ LI
Sbjct: 63 KLFHVMKSK-GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 121
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ KLD + +EM + G P G+ ++ L + + ++ M E + K+
Sbjct: 122 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 173
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 71/156 (45%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + + LI + ++ E+ +M+++ PD K+Y L++ QK
Sbjct: 107 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 166
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+Y +M + EP + ++ +++ ++ A+ Y+ ++ EM P + + LI G
Sbjct: 167 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 226
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
L SE + EA ++ + +G + YN +
Sbjct: 227 LISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADF 262
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 149/311 (47%), Gaps = 1/311 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L N LI LCK+ +++ A + KM +R F D +Y L+ G ++ +
Sbjct: 553 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 612
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G EPD +Y ++I+ C + DEAV L+ E ++ + P+ + + +I+G
Sbjct: 613 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 672
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ E + F + + E + YN ++ AYC + +A+++ D+MR GI P
Sbjct: 673 YCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 732
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY ++H + GR E+A + M RK G P V Y ++ +C Q+D + +
Sbjct: 733 TATYSSLIHGMCNIGRMEDAKCLIDEM-RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 791
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM + + P Y+ +I+ + A K EM+ GI P ++ L E
Sbjct: 792 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 851
Query: 305 GMEETAVVLAQ 315
G E +LA+
Sbjct: 852 GKIEEGKLLAE 862
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 150/369 (40%), Gaps = 69/369 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G+ + +N LI LCK +++ A +KM K + + +Y++L+ G + +
Sbjct: 339 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 398
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP------- 113
N V +E + GF P+ V Y +I+ +C +A+ + +M + P
Sbjct: 399 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 458
Query: 114 ----------------------------SPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+P F T+I+ L R AL+F + R
Sbjct: 459 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 518
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P +VG C + +DA + + + G G N T + ++H L K G +EA
Sbjct: 519 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 578
Query: 206 SVFKRMSR----------------------------------KPGTEPTVSTYEIVVRMF 231
+ K+M K G EP TY +++
Sbjct: 579 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 638
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C ++D A+ +W+E K+R ++P ++ Y +I+ C DK+++ K F E+L +
Sbjct: 639 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 698
Query: 292 QLFSNLKQA 300
+++ L +A
Sbjct: 699 VVYNTLIRA 707
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 1/302 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ LCK A E++ ++ ++ F ++ + L+ G + N+ + ++M + G
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F D ++Y +I+ C + +E +L EM +P + LI+G+ +L EA+
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + K R P TY ++ YC + +I + ++ E+ + N+ Y+ ++
Sbjct: 649 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 708
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ G T EA+ + M R G PT +TY ++ C +++ A + DEM+ G+LP
Sbjct: 709 CRNGNTVEAFKLHDDM-RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPN 767
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ Y+ LI C ++D QEM I P ++ + G +TA L
Sbjct: 768 VVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLH 827
Query: 316 KI 317
++
Sbjct: 828 EM 829
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 2/285 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A VF + + P +K+ T LL + L V+ M+ G PDV + IN
Sbjct: 263 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAIN 321
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
A C + ++A++LF +ME P+ + LI+GL L EA +F + K G
Sbjct: 322 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 381
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TY+ ++ + N+A ++ E + G PN Y+ ++ K G +A +
Sbjct: 382 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 441
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K G P T +++ FC Q++ A I +EM +RG ++T+I+ LC
Sbjct: 442 GDMVSK-GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 500
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ + A ++ +EML +RP L + L L EG AV L
Sbjct: 501 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 545
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 133/304 (43%), Gaps = 1/304 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ F+ I+ CK VE A ++F M+K P++ +Y L+ G + NL
Sbjct: 308 GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEA 367
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+M DG +++Y ++IN ++++EA + +E P+ ++ TLI+G
Sbjct: 368 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDG 427
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +AL+ G +G P + T N+++ +C ++ A +++EM G N
Sbjct: 428 YCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSIN 487
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ ++H L R E A + M + P +V C + A+ +W
Sbjct: 488 PGAFTTIIHWLCMNSRFESALRFLREMLLR-NMRPNDGLLTTLVGGLCKEGKHSDAVELW 546
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ +G + + LI+ LC + +A + ++ML+ G ++ L E
Sbjct: 547 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 606
Query: 305 GMEE 308
G E
Sbjct: 607 GKVE 610
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ + +N LI +C+ ++ A ++++ K R P++ +Y ++++G+ +
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 678
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ E+ E + V Y +I A+C EA +L +M + P+ + +
Sbjct: 679 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 738
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ + R+ +A + +K G P Y A++G YC +++ ++ EM
Sbjct: 739 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 798
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I PN TY +++ K+G + A + M K G P TY ++ FC +++
Sbjct: 799 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK-GIVPDTVTYNVLTNGFCKEGKIE 855
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 86/186 (46%), Gaps = 6/186 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI C++ + A ++ D M+ + P +Y+ L+ G + + EM+
Sbjct: 701 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 760
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G P+VV Y +I +C + D+ V + +EM + + P+ + +I+G +
Sbjct: 761 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 820
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + +G P+ TYN + +C +I + + ++ G+G N+ + ++
Sbjct: 821 TAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED----GVGFNSPLF--LI 874
Query: 193 HHLIKA 198
H +A
Sbjct: 875 HEAFRA 880
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT---EEAYSVFKRMSRKPGTEPT 220
+ I A ++E+ + G+ D+++H R A VF+ ++ K G PT
Sbjct: 222 IEIASAMADLNEVGESGVA--VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANK-GVFPT 278
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V T ++ +++ + +++ M+ +GV P ++++ST IN+ C K++DA + F
Sbjct: 279 VKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFF 337
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+M +G+ P ++NL L G + A +K+ K
Sbjct: 338 DMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVK 376
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + + LI CK +++ V +M P+ +YT++++G+ + +
Sbjct: 759 MRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGD 818
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
+ + ++ EM G PD V+Y ++ N C + +E
Sbjct: 819 MKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 92/230 (40%), Gaps = 17/230 (7%)
Query: 105 EMEATNCKP-----SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+++T CK SPH F ++ + AL FF F ++ + + +
Sbjct: 128 SLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFY------FASDSCGFRFTLRS 181
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
YC MR + R I R ++ R E S ++ +
Sbjct: 182 YCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGD--PKNRHIEIASAMADLNEVGESGV 239
Query: 220 TVSTYEIVVRMFCY---NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
V+ ++++ ++C N A+ ++ + +GV P + + L++SL ++L+ +
Sbjct: 240 AVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSY 299
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+ M G+ P LFS A G E A+ L ++KL +P V
Sbjct: 300 WVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNV 348
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 164/333 (49%), Gaps = 17/333 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + ++ +N +I+ LCK + +E+A ++ +M+ +P+ +Y IL++G ++
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EMK G E DVV Y +I+ CS D LF EM P+ ++
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING + EA +RG +P+ TY ++G C R A + D M + G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T TY+++++ L K G +A+ +F+ M K G V +Y ++ C N ++D A
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEK-GKRLEVVSYNTLIMGLCNNGKLDEA 239
Query: 241 MRIWDEMKARG--VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--- 295
M+++ + G V P + ++T+I LC E +LD A + + M++ G G LF+
Sbjct: 240 MKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG--SFGNLFTCHI 297
Query: 296 ----NLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+K + D+ ME L +++ KL P
Sbjct: 298 LIGEYIKSGIIDKAME-----LWKRVHKLGLVP 325
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 153/322 (47%), Gaps = 3/322 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ LI+ CK A V M +R PD+ +YT ++ G +
Sbjct: 110 GISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKA 169
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M + G EP V+Y ++IN C +A ++F M + + TLI G
Sbjct: 170 LDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMG 229
Query: 125 LGSEKRLSEALQFFGQSKKRG--FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
L + +L EA++ F + G EP+ T+N V+ C R++ A + D M + G
Sbjct: 230 LCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSF 289
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
N T I++ IK+G ++A ++KR+ K G P+ +TY +++ FC ++ A
Sbjct: 290 GNLFTCHILIGEYIKSGIIDKAMELWKRV-HKLGLVPSSTTYSVMIDGFCKMHMLNFAKG 348
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ MK G+ P + Y+TL+ SLC E L+ A + FQEM + P F+ +
Sbjct: 349 LFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTL 408
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
G +A L + ++ TP
Sbjct: 409 KAGDIHSAKELLNDMQQMGLTP 430
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 147/312 (47%), Gaps = 3/312 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ ++ + +I LCK +A ++FD M ++ +P +Y +L+ G ++
Sbjct: 141 MTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGC 200
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIF 118
+ +++ M + G +VVSY +I C+ + DEA++LF + + +P F
Sbjct: 201 IGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITF 260
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
T+I GL E RL +A++ + +RG T + ++G Y S I+ A + + K
Sbjct: 261 NTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHK 320
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P++ TY +++ K A +F RM + G PT+ Y ++ C + ++
Sbjct: 321 LGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM-KISGLSPTLFDYNTLMASLCKESSLE 379
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A R++ EMK P ++ +I+ + A + +M +G+ P +S+
Sbjct: 380 QARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFI 439
Query: 299 QALRDEGMEETA 310
L G E A
Sbjct: 440 NRLSKLGQMEEA 451
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 136/285 (47%), Gaps = 3/285 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEGWGQQKNLL 62
G + E+ +N LI LC + ++ A ++F + + +PD+ ++ +++G ++ L
Sbjct: 215 GKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLD 274
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E+Y M + G ++ + I+I + + D+A+EL++ + PS + +I
Sbjct: 275 KAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMI 334
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G L+ A F + K G P YN ++ + C + A R+ EM++
Sbjct: 335 DGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCE 394
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+T +++I++ +KAG A + M ++ G P TY + Q++ A
Sbjct: 395 PDTISFNIMIDGTLKAGDIHSAKELLNDM-QQMGLTPDAYTYSSFINRLSKLGQMEEAKG 453
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+D M A G+ P H+Y +LI D++++ ++M D+G+
Sbjct: 454 AFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGV 498
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 130/261 (49%), Gaps = 4/261 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD FN +I LCK +++A E++D M +R ++ + IL+ + + + E+
Sbjct: 255 PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
++ + G P +Y +MI+ C + A LF M+ + P+ + TL+ L
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK 374
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
E L +A + F + K+ EP+ ++N ++ + I+ A ++++M++ G+ P+ T
Sbjct: 375 ESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYT 434
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ L K G+ EEA F M G P Y+ +++ F N +++ + + +M
Sbjct: 435 YSSFINRLSKLGQMEEAKGAFDSMI-ASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM 493
Query: 248 KARGVLPVMHMYSTLINSLCH 268
GV+ + + ++++ LC+
Sbjct: 494 ADMGVILDLEITNSILTFLCN 514
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 105/238 (44%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GL ++ +ID CK + A+ +F +MK P + Y L+ ++ +L
Sbjct: 320 KLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLE 379
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+++EMK+ EPD +S+ IMI+ A A EL +M+ P + + + I
Sbjct: 380 QARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFI 439
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
N L ++ EA F G P+ Y++++ + + I + ++ +M G+
Sbjct: 440 NRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVI 499
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + +L L + + S + ++S ++++++ +N ++ ++
Sbjct: 500 LDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLLMKIQKFNPKLQIS 557
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + ++ I+ L K +E A+ FD M PD Y L++G+G
Sbjct: 423 MQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDE 482
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
+ + + R+M D G D+ ++ C++ + +EL
Sbjct: 483 IEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 165/326 (50%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +FG + + LID CK +E+A+++F +M K + +YT+L+ G +
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y +M++DG P++ +Y ++N HC R +A +LF EM + + T
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNT 308
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL E + +EA + Q K G P TYN ++ +C ++ A + +++ G
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+I++ K G T A V K M + G +P+ TY I++ F ++ A
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER-GIKPSKITYTILIDTFARMDNMEKA 427
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M+ G+ P +H YS LI+ C + ++++A + F+ M+ + P +++ +
Sbjct: 428 IQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLG 487
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
EG A+ L +++++ P V
Sbjct: 488 YCKEGSSYRALRLFREMEEKELPPNV 513
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 150/303 (49%), Gaps = 1/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ L +N +++ CK + A ++FD+M++R +I +Y L+ G ++
Sbjct: 259 MQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
N+V +MK DG P++++Y +I+ C + +A+ L R++++ PS +
Sbjct: 319 ANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + S A + + ++RG +P TY ++ + + A ++ M + G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELG 438
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +++H G+ EA +FK M K EP Y +V +C A
Sbjct: 439 LTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK-LEPNKVIYNTMVLGYCKEGSSYRA 497
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R++ EM+ + + P + Y +I LC E K +A ++M+D GI P + + + +A
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISRA 557
Query: 301 LRD 303
D
Sbjct: 558 KND 560
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 152/312 (48%), Gaps = 2/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ + S + F++ K + D D+ S+ I+++G + + ++ E++
Sbjct: 132 FNNLLTFVVGSSSFNQWWRFFNE-SKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELR 190
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF P+VV Y +I+ C ++A +LF EM + + LI+GL
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + + + ++ G P TYN V+ +C R DA+++ DEMR+ G+ N TY+ ++
Sbjct: 251 QGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLI 310
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + + EA V +M + G P + TY ++ FC ++ A+ + ++K+RG+
Sbjct: 311 GGLCREMKANEANKVMDQM-KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ L++ C + A K +EM + GI+P ++ L E A+
Sbjct: 370 SPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQ 429
Query: 313 LAQKIDKLRKTP 324
L +++L TP
Sbjct: 430 LRSPMEELGLTP 441
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 158/312 (50%), Gaps = 6/312 (1%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
F +I C++ +E++ ++ ++++ F P++ YT L++G ++ + +++ EM
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEM 224
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G + +Y ++I+ + E++ +M+ P+ + + ++N + R
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRT 284
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A + F + ++RG TYN ++G C M+ N+A ++MD+M+ GI PN TY+ +
Sbjct: 285 KDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTL 344
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ G+ +A S+ + + + G P++ TY I+V FC A ++ EM+ RG
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSR-GLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETA 310
+ P Y+ LI++ D ++ A + M ++G+ P +S L +G M E +
Sbjct: 404 IKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 311 ----VVLAQKID 318
+++A+K++
Sbjct: 464 RLFKLMVAKKLE 475
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y +MINA+ ++ D ++ F EM P + F L+ + ++ +FF +SK
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156
Query: 143 KR----------------------------------GFEPEAPTYNAVVGAYCWSMRIND 168
+ GF P Y ++ C I
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A + EM K G+ N TY +++H L K G ++ + ++++M ++ G P + TY V+
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM-QEDGVFPNLYTYNCVM 275
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C + + A +++DEM+ RGV + Y+TLI LC E K ++A K +M GI
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335
Query: 289 P 289
P
Sbjct: 336 P 336
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 162/324 (50%), Gaps = 11/324 (3%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
Q+LP FN L+D L KSRH +A + + +RRF PD+ +Y L +GW + K+ ++
Sbjct: 161 QDLPLFNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLADGWCRAKDTSRALDL 219
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-----TNCKPSPHIFCTLI 122
R+M + G P +Y I++ A + A F +M+ +CKP + T+I
Sbjct: 220 LRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTII 279
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GLG +L +A + F + K G P TYNA++ C + DA + D+M +
Sbjct: 280 HGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYM 339
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY +++ L G+ + A + +RM + G EP V TY +++R +++ A+
Sbjct: 340 PNVVTYTVLIRGLCHVGKIDRAMKLMERM-KGEGCEPVVQTYNVLIRYSFEEGEIEKALC 398
Query: 243 IWDEM-KARGVLPVMHMYSTLINSLCHEDKLDD---ACKYFQEMLDIGIRPPGQLFSNLK 298
+++ M K LP Y+ +I+++ + +D A + EM++ G P + + +
Sbjct: 399 LFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVERGYLPRRFMLNRVL 458
Query: 299 QALRDEGMEETAVVLAQKIDKLRK 322
L G ++ + L + +K R+
Sbjct: 459 NGLMLTGNQQISRDLLRMQEKYRR 482
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 13/217 (5%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K ++ + +I L + +++A+++FD+M K P + +Y L++ ++ N+
Sbjct: 269 KPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVT 328
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ +M + P+VV+Y ++I C + D A++L M+ C+P + LI
Sbjct: 329 VFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSF 388
Query: 127 SEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRIND---AYRMMDEMRKCGIG 182
E + +AL F + SK P TYN ++ A R D A RM+ EM + G
Sbjct: 389 EEGEIEKALCLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVERGYL 448
Query: 183 PNTRTYDIVLHHLIKAG---------RTEEAYSVFKR 210
P + VL+ L+ G R +E Y +R
Sbjct: 449 PRRFMLNRVLNGLMLTGNQQISRDLLRMQEKYRRLRR 485
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N LI +CK +VE A VFD M ++ + P++ +YT+L+ G
Sbjct: 298 MSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGK 357
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
+ ++ MK +G EP V +Y ++I ++A+ LF M + +C P+ +
Sbjct: 358 IDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERMSKGEDCLPNQDTYN 417
Query: 120 TLINGLGSEKR---LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS--MRIN-DAYRMM 173
+I+ + KR ++ A + + +RG+ P N V+ + +I+ D RM
Sbjct: 418 IIISAMFVRKRAEDMATAARMVMEMVERGYLPRRFMLNRVLNGLMLTGNQQISRDLLRMQ 477
Query: 174 DEMRK 178
++ R+
Sbjct: 478 EKYRR 482
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 147/289 (50%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL+ + FN LI+ CKS ++++ + M + R PD+ +Y++L+ G ++
Sbjct: 251 IGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ 310
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N+++ EM D G P+ V++ +IN HC R D +E++++M KP + T
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT 370
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL L EA + + +RG +P+ TY ++ C + A + EM K G
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + + ++ + G+ EA + M + G +P +TY +V+ FC V
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREM-LEAGIKPDDATYTMVIHGFCKKGDVKTG 489
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ EM+ G +P + Y+ L+N LC + ++ +A ML++G+ P
Sbjct: 490 FKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVP 538
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 142/302 (47%), Gaps = 1/302 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L D L K A ++++ + PD+ + +L+ ++ + ++ E+ G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P VVS+ +IN +C + D+ L R M P + LINGL E +L +A
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + RG P T+ ++ +C + R + + +M + G+ P+ TY+ +++ L
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G EA + M+++ G +P TY +++ C ++ A+ I EM G+
Sbjct: 376 CKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
++ LI+ C E ++ +A + +EML+ GI+P ++ + +G +T L +
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494
Query: 316 KI 317
++
Sbjct: 495 EM 496
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 20/318 (6%)
Query: 20 LCKSRHVERAQEVFDKMKKRRFDPDIKS-YTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
LC + + AQ + + R+ S +T +LE G ++ L + + D G+
Sbjct: 113 LCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFS 172
Query: 79 DVVS-------YGIMINAHCSAKRYDEAVEL--------FREMEATNCKPSPHI--FCTL 121
D + + + I H +D ++L F E E +C P + F L
Sbjct: 173 DAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYE-EILDCGYPPDVCKFNVL 231
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++ L E +++EA FG+ KRG P ++N ++ YC S ++ +R+ M + +
Sbjct: 232 MHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRV 291
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY ++++ L K G+ ++A +F M + G P T+ ++ C + D+ M
Sbjct: 292 FPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR-GLVPNDVTFTTLINGHCVTGRADLGM 350
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I+ +M +GV P + Y+TLIN LC L +A K EM G++P ++ L
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410
Query: 302 RDEGMEETAVVLAQKIDK 319
EG E+A+ + +++ K
Sbjct: 411 CKEGDLESALEIRKEMVK 428
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 4/224 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N LI+ LCK + A+++ +M +R PD +YT+L++G ++ +L S
Sbjct: 360 GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESA 419
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ +EM +G E D V++ +I+ C + EA REM KP + +I+G
Sbjct: 420 LEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHG 479
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + + + + G P TYN ++ C ++ +A ++D M G+ P+
Sbjct: 480 FCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPD 539
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
TY+I+L K G E+ F ++ + G +Y ++
Sbjct: 540 DITYNILLEGHCKHGNRED----FDKLQSEKGLVQDYGSYTSLI 579
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 53/236 (22%)
Query: 114 SPHIFCTLINGLGSEKRLSEA---LQFFGQSK--------------KRGFEPEAPTYNAV 156
S H +CT+ + L + K LSEA LQF K RG ++ +
Sbjct: 102 SIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVL 161
Query: 157 VGAYCWSMRINDAY-----------------------RMM------------DEMRKCGI 181
+ AY S +DA R+M +E+ CG
Sbjct: 162 MNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGY 221
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ +++++H L K + EA +F + ++ G PTV ++ ++ +C + +D
Sbjct: 222 PPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKR-GLRPTVVSFNTLINGYCKSGNLDQGF 280
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R+ M V P + YS LIN LC E +LDDA K F EM D G+ P F+ L
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + + LID CK +E A E+ +M K + D ++T L+ G+ ++
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ REM + G +PD +Y ++I+ C +L +EM+ P +
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L+NGL + ++ A G P+ TYN ++ +C
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHC 551
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 144/274 (52%), Gaps = 4/274 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LCK+ + A+ +M + P++ SY I+++G+ + +N+ REM+
Sbjct: 67 YNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREME 125
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P +Y ++ + C +A+++F EM A C+P F L++GL +++
Sbjct: 126 ELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIH 185
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F RG +P+ TYN ++ C ++++A +++ M++ + P TY ++
Sbjct: 186 EARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLI 245
Query: 193 HHLIKAGRTEEAYSVFKRMSRK--PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
HL K R ++AY VF++M+ P TEP S I++ C + A ++ EM+ R
Sbjct: 246 DHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVL-ILINGLCKARRPGEAKEMFQEMRGR 304
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
G+ P + Y+TL+ L KL DA + MLD
Sbjct: 305 GISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLD 338
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 148/285 (51%), Gaps = 5/285 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G ++ ++ + CK+ +V +A +VF +M + +PDI ++ +LL G + +
Sbjct: 124 MEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARK 183
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++R M G +PDVV+Y MI C K+ DEAV L M+ + P+ + T
Sbjct: 184 IHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 243
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA--VVGAYCWSMRINDAYRMMDEMRK 178
LI+ L RL +A + F + + P Y+ ++ C + R +A M EMR
Sbjct: 244 LIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRG 303
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSV-FKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI P TY+ +L L+ + ++A + + + + P P + TYEI++ C QV
Sbjct: 304 RGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPA--PNMFTYEILISSLCKTDQV 361
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ A ++ M+ +G +P + ++ L++ L +LDDA + ++EM
Sbjct: 362 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 406
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LI+ LCK+R A+E+F +M+ R P + +Y LLEG L E+ M D
Sbjct: 281 LINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQV 340
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P++ +Y I+I++ C + +EA +L M PS I+ L++ L RL +A
Sbjct: 341 PAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAF 400
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + + + + + N ++ +++A + +M GI P+ TYD ++ L
Sbjct: 401 ELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGL 460
Query: 196 IKAGRTEEAYSVFKRMSR 213
G+ ++A + + + R
Sbjct: 461 CWQGKADQARKLVEELVR 478
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 2/227 (0%)
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+A + EM+ P C LI G + + G P A YN ++
Sbjct: 12 QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLI 71
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
C + + +A + M + PN +Y+I++ KA E+A + + M + G
Sbjct: 72 SCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALAFLREM-EELGH 129
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
PT Y +V+ FC V AM ++ EM A+G P + ++ L++ L K+ +A +
Sbjct: 130 PPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARE 189
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+ M G +P ++ + L + AV L +++ + +P
Sbjct: 190 LFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP 236
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+++A + K GF P+ ++ ++ + S +D M + G+ PN Y+
Sbjct: 10 VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L KAG EA S KRM + P V +Y I++ +C ++ A+ EM+
Sbjct: 70 LISCLCKAGMLAEAESYLKRMPQH--CAPNVVSYNIIIDGYCKARNIEKALAFLREMEEL 127
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
G P H YS+++ S C + A F EM G P
Sbjct: 128 GHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEP 166
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 157/352 (44%), Gaps = 36/352 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+ + +N ++DTLCK + A+++ MK R P+ +Y IL+ G+ +
Sbjct: 234 MGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V M + PDV +Y ++IN C+ R +EA +L EME P + T
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING ++SEA + + ++G +P A T+N +V YC +++DA + +M + G
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC-------- 232
P+ TY+ +++ KAG EA+ M RK +V T ++R C
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV-TLNTILRTLCREKKLEEA 472
Query: 233 ---------------------------YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ VD A+++WDEMK + ++P Y+ +I
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGG 532
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
LC K + A E+L+ G+ P ++ + EG E A K+
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 156/369 (42%), Gaps = 74/369 (20%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG---W-------- 55
LPD +N LI+ LC +E A ++ D+M+ + PD+ SY L+ G W
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369
Query: 56 --------GQQKNLLSMNEVYR----------------EMKDDGFEPDVVSYGIMINAHC 91
G + N ++ N + + +M++ GF PD V+Y +IN +C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF----- 146
A EA EM N K T++ L EK+L EA + ++KRG+
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV 489
Query: 147 ------------------------------EPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
P TYN ++G C + A ++E+
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G+ P+ TY+ +LH + G E+A+ +M +P V T I++R C
Sbjct: 550 LESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN-SFKPDVFTCNILLRGLCMEGV 608
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
++ A+++++ ++G Y+TLI SLC E +LDDA EM + + P ++
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668
Query: 297 LKQALRDEG 305
+ AL D G
Sbjct: 669 IITALTDSG 677
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 134/279 (48%), Gaps = 3/279 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+ + FN +I C + A E + M K PD +Y +L+ ++ L
Sbjct: 201 KLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLG 260
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ +MK G P+ +Y I++ +C EA + M N P + LI
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLI 320
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV-GAYCWSMRINDAYRMMDEMRKCGI 181
NGL +E R+ EA + + + P+ +YN ++ G WS +I++A+++++EM + G+
Sbjct: 321 NGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWS-KISEAFKLLEEMSEKGV 379
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN T++I++ K G+ ++A + +M + G P TY ++ +C + A
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKM-EESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
R DEM + + +T++ +LC E KL++A K
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLS 477
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 4/284 (1%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN---EVYREMKD 73
I +S A ++F KMK+ R P++ + LL + + S++ E + +
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIK 201
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G P+V ++ I+I +C ++ +AVE M NC P + T+++ L + RL +
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGD 261
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A K RG P TYN +V YC + +A +++ M + + P+ TY+++++
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN 321
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L GR EEA+ + M P V +Y ++ +++ A ++ +EM +GV
Sbjct: 322 GLCNEGRIEEAFKLRDEMENLK-LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK 380
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P ++ ++ C E K+DDA +M + G P ++ L
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + +N LI+ CK+ ++ A D+M ++ D + +L ++K
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK 468
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ + G+ D VSYG +I + D A++L+ EM+ PS +
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL + +A+ + + G P+ TYN ++ YC + A++ ++M +
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T +I+L L G E+A +F K TV TY ++ C ++D A
Sbjct: 589 FKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTV-TYNTLITSLCKEGRLDDA 647
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ EM+ + + P + Y+ +I +L ++ +A ++ +ML+ G P
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLP 696
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 27/327 (8%)
Query: 1 MDKFG---LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
MD+ G +K + N ++ TLC+ + +E A ++ +KR + D SY L+ G+ +
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
N+ +++ EMK+ P V+Y +I C + ++A+ E+ + P
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+++G E + +A QF + + F+P+ T N ++ C + A ++ +
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWV 620
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G +T TY+ ++ L K GR ++A+++ M K P TY ++ + ++
Sbjct: 621 SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE-LGPDHYTYNAIITALTDSGRI 679
Query: 238 DMAMRIWDEMKARGVLP--VMHM---------------------YSTLINSLCHEDKLDD 274
A +M +G LP V+ + YS I LC E K D
Sbjct: 680 REAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKD 739
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQAL 301
A + F E GI + NL L
Sbjct: 740 AMRIFGESKQKGITVDKSTYINLMDGL 766
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 9/234 (3%)
Query: 94 KRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
+R+D + + R PS + T I + A Q F + K+ P T
Sbjct: 119 RRHDLHLSILRLTS-----PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTC 173
Query: 154 NAVVGA---YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
N ++ + Y S ++ + ++ K GI PN T++IV++ + ++A
Sbjct: 174 NTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNV 233
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M K P TY ++ C ++ A + +MK+RG+LP + Y+ L+ C
Sbjct: 234 MG-KYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMG 292
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L +A + M + P ++ L L +EG E A L +++ L+ P
Sbjct: 293 WLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLP 346
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 149/299 (49%), Gaps = 1/299 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LC A V + M +R PD+ +YTILLE ++ ++ EM
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH 228
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PD+V+Y +++N C R ++A+E + + + C+P+ + ++ GL + +R
Sbjct: 229 DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + +G P T+N ++ C + A ++++M + G PN+ +Y+ +L
Sbjct: 289 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLL 348
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H K + +A + M + G P + +Y ++ C N +VD+A+ + ++K +G
Sbjct: 349 HAFCKQKKIHKAMEFVELMVSR-GCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
PV+ Y+T+I+ L K +A + EM G++P +S + L E E AV
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAV 466
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 153/295 (51%), Gaps = 4/295 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L++ CK ++A ++ D+M + PDI +Y ++L G Q+ + E
Sbjct: 198 LPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAME 257
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ + G EP+ VSY I++ +A+R+++A +L EM C P+ F LI+ L
Sbjct: 258 FLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLC 317
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ A++ Q + G P + +YN ++ A+C +I+ A ++ M G P+
Sbjct: 318 RRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIV 377
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y+ +L L + G + A + ++ K G P + +Y V+ + A+ + DE
Sbjct: 378 SYNTLLTALCRNGEVDVAIELLHQLKDK-GCSPVLISYNTVIDGLTKAGKTKEALELLDE 436
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M ++G+ P + YST+ + LC ED++++A + F ++ D+GIRP L++ + L
Sbjct: 437 MTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGL 491
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 153/310 (49%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N +++ +C+ VE A E + +P+ SY I+L+G +
Sbjct: 227 MHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAER 286
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM G P+VV++ ++I+ C + A+E+ +M C P+ +
Sbjct: 287 WEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNP 346
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ +K++ +A++F RG P+ +YN ++ A C + ++ A ++ +++ G
Sbjct: 347 LLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKG 406
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P +Y+ V+ L KAG+T+EA + M+ K G +P + TY + C +++ A
Sbjct: 407 CSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK-GLQPDIITYSTIASGLCREDRIEEA 465
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R + +++ G+ P +Y+ ++ LC + +A F M+ G P ++ L +
Sbjct: 466 VRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEG 525
Query: 301 LRDEGMEETA 310
L EG+ + A
Sbjct: 526 LAYEGLVKEA 535
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 147/304 (48%), Gaps = 10/304 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
+N ++ C + ++ A+ + M +PD +Y L+ G G+ N L+ V
Sbjct: 137 YNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALA---VLE 190
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M G PDVV+Y I++ A C Y +A++L EM C P + ++NG+ E
Sbjct: 191 DMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEG 250
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R+ +A++F G EP +YN V+ + R DA ++M+EM G PN T++
Sbjct: 251 RVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 310
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ L + G E A V ++M + G P +Y ++ FC ++ AM + M +
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQMPQY-GCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVS 369
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
RG P + Y+TL+ +LC ++D A + ++ D G P ++ + L G +
Sbjct: 370 RGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKE 429
Query: 310 AVVL 313
A+ L
Sbjct: 430 ALEL 433
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + FN LI LC+ VE A EV ++M + P+ SY LL + +QK
Sbjct: 297 MAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKK 356
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E M G PD+VSY ++ A C D A+EL +++ C P + T
Sbjct: 357 IHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNT 416
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + EAL+ + +G +P+ TY+ + C RI +A R +++ G
Sbjct: 417 VIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMG 476
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P Y+ +L L K T A +F M G P STY I+V Y V A
Sbjct: 477 IRPTAALYNAILLGLCKRRETHNAIDLFAYMISS-GCMPNESTYTILVEGLAYEGLVKEA 535
Query: 241 MRIWDEMKARGVL 253
++ ++ +RGV+
Sbjct: 536 RELFAQLCSRGVV 548
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 39/284 (13%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
PDV+ Y M+ +C A + D A L +M +P + + TLI GL R S AL
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMPV---EPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 138 FGQSKKRGFEPE--------------------------------AP---TYNAVVGAYCW 162
+RG P+ AP TYN V+ C
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
R+ DA + + G PNT +Y+IVL L A R E+A + + M+ K G P V
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHK-GCPPNVV 307
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
T+ +++ C V+ AM + ++M G P Y+ L+++ C + K+ A ++ + M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 283 LDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+ G P ++ L AL G + A+ L ++ +P++
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVL 411
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 13/196 (6%)
Query: 97 DEAVELFREMEATNCKPSPHIF---CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
D+A+ L + N PSP LI L + R ++A + S P+ Y
Sbjct: 84 DDALRLVDSLAGLN-PPSPAAVGPCAALIKKLCASGRTADARRVLAASG-----PDVMVY 137
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
NA+V YC + +++ A R++ +M + P+ TY+ ++ L GRT A +V + M R
Sbjct: 138 NAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR 194
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
+ G P V TY I++ C + AM++ DEM +G P + Y+ ++N +C E +++
Sbjct: 195 R-GCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVE 253
Query: 274 DACKYFQEMLDIGIRP 289
DA ++ + + G P
Sbjct: 254 DAMEFLKNLPSYGCEP 269
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 148/313 (47%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ +N +I +CK VERA E+ + + +PD+ SY ILL + Q
Sbjct: 247 GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEG 306
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G EP+ V+Y I+I++ C R DEA+ + + M P + + LI+
Sbjct: 307 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 366
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E RL A+ G P+ YN ++ A C + N A + +++R G PN
Sbjct: 367 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 426
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ ++ L G A + M K G +P TY ++ C + V+ A+ +
Sbjct: 427 VSSYNTMISALWSCGDRSRALGMVPAMISK-GIDPDEITYNSLISCLCRDGLVEEAIGLL 485
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M+ G P + Y+ ++ LC ++DDA F EM++ G RP + L + +
Sbjct: 486 DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFA 545
Query: 305 GMEETAVVLAQKI 317
G A+ LA +
Sbjct: 546 GWRTEAMELANSL 558
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 153/311 (49%), Gaps = 6/311 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I CK +E A +V ++MK R F PDI +Y I++ ++ L V ++
Sbjct: 150 YNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLL 209
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D P V++Y I+I A +EA++L EM A P + + +I G+ E +
Sbjct: 210 LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 269
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + +G EP+ +YN ++ A+ + ++ +++ EM G PN TY I++
Sbjct: 270 RAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 329
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + GR +EA SV K M K T P +Y+ ++ C ++D+A+ I D M + G
Sbjct: 330 SSLCRFGRIDEAISVLKVMIEKELT-PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-----RDEGME 307
LP + Y+T++ +LC + A + F ++ +G P ++ + AL R +
Sbjct: 389 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 448
Query: 308 ETAVVLAQKID 318
++++ ID
Sbjct: 449 MVPAMISKGID 459
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 149/313 (47%), Gaps = 2/313 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+LI +++E+A V + ++ +PD+ +Y ++ G+ + + + +V MK
Sbjct: 118 KLIKGFFNFKNIEKASRVMEILESHT-EPDVFAYNAVISGFCKVNQIEAATQVLNRMKAR 176
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
GF PD+V+Y IMI + C+ ++ A+ + ++ NC P+ + LI E ++EA
Sbjct: 177 GFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 236
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
++ + RG P+ TYNA++ C + A ++ + G P+ +Y+I+L
Sbjct: 237 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRA 296
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+ G+ +E + M + G EP TY I++ C ++D A+ + M + + P
Sbjct: 297 FLNQGKWDEGEKLVAEMFSR-GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP 355
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ Y LI++LC E +LD A M+ G P ++ + AL G A+ +
Sbjct: 356 DTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 415
Query: 315 QKIDKLRKTPLVD 327
K+ + P V
Sbjct: 416 NKLRGMGCPPNVS 428
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 148/326 (45%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N +I +LC R + A V D++ P + +YTIL+E +
Sbjct: 173 MKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGG 232
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G PD+ +Y +I C + A EL + + C+P +
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ ++ + E + + RG EP TY+ ++ + C RI++A ++ M +
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T +YD ++ L K GR + A + M G P + Y ++ C N + A
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN-GCLPDIVNYNTILAALCKNGNANQA 411
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I+++++ G P + Y+T+I++L A M+ GI P +++L
Sbjct: 412 LEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISC 471
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L +G+ E A+ L +++ P V
Sbjct: 472 LCRDGLVEEAIGLLDDMEQSGFRPTV 497
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 142/297 (47%), Gaps = 2/297 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+L++ CK+ + + + + + PD+ T L++G+ KN+ + V E+ +
Sbjct: 83 KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILES 141
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
EPDV +Y +I+ C + + A ++ M+A P + +I L + ++L A
Sbjct: 142 HTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 201
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L Q P TY ++ A IN+A ++++EM G+ P+ TY+ ++
Sbjct: 202 LTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 261
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+ K G E A + ++ K G EP V +Y I++R F + D ++ EM +RG P
Sbjct: 262 MCKEGMVERAAELITSLTSK-GCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 320
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
YS LI+SLC ++D+A + M++ + P + L AL EG + A+
Sbjct: 321 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 151/306 (49%), Gaps = 2/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ N + +LCK + A E FD M + PD+ +Y++LL G+ +
Sbjct: 323 MTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGY 382
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ M ++ M+ +G D Y I+I+A+ DEA+ +F +M+ P + T
Sbjct: 383 VVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGT 442
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I RL++A+ F Q G +P+ YN+++ +C + A ++ EM G
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG 502
Query: 181 IG-PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I PNT ++ +++ L K GR EA +F + G P V T+ ++ + +++
Sbjct: 503 IPRPNTVFFNSIINSLCKEGRVVEAQDIFD-LVIHIGERPDVITFNSLIDGYGLVGKMEK 561
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + D M + G+ P + YS L++ C ++DD F+EML G++P + +
Sbjct: 562 AFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILH 621
Query: 300 ALRDEG 305
L ++G
Sbjct: 622 GLFNDG 627
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 146/303 (48%), Gaps = 3/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQ 58
M + G++ + ++ ++ +LC+ +RA ++ M K+ P++ SY ++ G+ ++
Sbjct: 181 MPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFRE 240
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ ++ EM G PDVV+Y I+A C A+ D+A + R+M + +P +
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTY 300
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+G + E F + +RG P+ T N+ + + C + +A D M
Sbjct: 301 NCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAA 360
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G P+ TY ++LH G + ++F M G S Y I++ + +D
Sbjct: 361 KGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGN-GIVADHSVYNILIDAYGKRGMMD 419
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM I+ +M+ RGV+P Y T+I + +L DA F +M+ +G++P ++++L
Sbjct: 420 EAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLI 479
Query: 299 QAL 301
Q
Sbjct: 480 QGF 482
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 146/314 (46%), Gaps = 6/314 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N +I + V +A +F +M ++ PD+ +Y+ ++ + + +
Sbjct: 222 GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA 281
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V R+M +GFEPD V+Y MI+ + ++ E +FREM P + ++
Sbjct: 282 ELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSS 341
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + EA +FF +G +P+ TY+ ++ Y + D + + M GI +
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVAD 401
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+I++ K G +EA +F +M + G P TY V+ F ++ AM +
Sbjct: 402 HSVYNILIDAYGKRGMMDEAMLIFTQMQER-GVMPDAWTYGTVIAAFSRMGRLADAMDKF 460
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI-RPPGQLFSNLKQALRD 303
++M A G+ P +Y++LI C L A + EM+ GI RP F+++ +L
Sbjct: 461 NQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCK 520
Query: 304 EGMEETAVVLAQKI 317
EG VV AQ I
Sbjct: 521 EG----RVVEAQDI 530
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 142/305 (46%), Gaps = 5/305 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + +I + + A + F++M PD Y L++G+ NL+ E
Sbjct: 434 MPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKE 493
Query: 67 VYREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ EM G P+ V + +IN+ C R EA ++F + +P F +LI+G
Sbjct: 494 LISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGY 553
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
G ++ +A G EP+ TY+A++ YC + RI+D + EM G+ P T
Sbjct: 554 GLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTT 613
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY I+LH L GRT A + M + GT +ST I++ C N D A+ ++
Sbjct: 614 ITYGIILHGLFNDGRTVGAKKMCHEMI-ESGTTMDISTCGIILGGLCRNNCDDEAIALFK 672
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++ A V + + +T+I+++ K ++A + F + G+ P + + L EG
Sbjct: 673 KLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEG 732
Query: 306 MEETA 310
E A
Sbjct: 733 SVEEA 737
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I++LCK V AQ++FD + PD+ ++ L++G+G + V M
Sbjct: 511 FNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMI 570
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPDVV+Y +++ +C R D+ + LFREM + KP+ + +++GL ++ R
Sbjct: 571 SVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTV 630
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + + G + T ++G C + ++A + ++ + N + ++
Sbjct: 631 GAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMI 690
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K + EEA +F +S G P STY +++ V+ A ++ M+ G
Sbjct: 691 DAMYKVRKREEANELFDSIS-ATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGC 749
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P + + +I L + ++ A Y ++
Sbjct: 750 APSSRLLNNIIRVLLEKGEISKAGNYLSKV 779
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 106/231 (45%), Gaps = 1/231 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ ++ L+D C++ ++ +F +M + P +Y I+L G
Sbjct: 569 MISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + G D+ + GI++ C DEA+ LF+++ A N K + I T
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINT 688
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + ++ EA + F G P A TY ++ + +A M M K G
Sbjct: 689 MIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSG 748
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
P++R + ++ L++ G +A + ++ K ST +++ +F
Sbjct: 749 CAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKT-ISLEASTASLMLSLF 798
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 37/214 (17%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P V +Y I+++ C A R P +
Sbjct: 117 PTVCTYNILMDCCCRAHR-------------------PTV----------------GFAL 141
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR-MMDEMRKCGIGPNTRTYDIVLHHLI 196
FG+ K G + + N ++ C + R +DA ++ M + G+ P+T +Y VL L
Sbjct: 142 FGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLC 201
Query: 197 KAGRTEEAYSVFKRMSRKP-GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ R++ A + M +K G P V +Y V+ F +V A ++ EM +GV+P
Sbjct: 202 EDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPD 261
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ YS+ I++LC +D A ++M+ G P
Sbjct: 262 VVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 76/188 (40%), Gaps = 13/188 (6%)
Query: 145 GF-EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
GF P A A ++ D + + DE+ + R + L L +A +
Sbjct: 31 GFRSPIAAFATATERVRAGTLSTEDTHHLFDELLRQTTPVPERALNGFLTALARAPSSAT 90
Query: 204 -------AYSVFKRMSRKPG----TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
A ++F R+ R+ PTV TY I++ C + + ++ G+
Sbjct: 91 CRDGPSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGL 150
Query: 253 LPVMHMYSTLINSLCHEDKLDDACK-YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ + + L+ LCH + DDA M ++G+ P +S + ++L ++ + A+
Sbjct: 151 KTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRAL 210
Query: 312 VLAQKIDK 319
L + K
Sbjct: 211 DLLHTMVK 218
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 152/293 (51%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + N LI LC+ +++ A +V M + D +Y I+++G + +
Sbjct: 452 GLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEA 511
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M GF+PD+ ++ I ++ +C+ + +E + L +M++ KP + T+I+G
Sbjct: 512 IQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDG 571
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + +A ++ + K G P A YNA++G Y + I+DA ++D M+ GI P
Sbjct: 572 YCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPT 631
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ + AG EE +VF + K E V Y I+++ FC ++D A+ +
Sbjct: 632 PVTYNSLMYWMCHAGLVEEVKAVFAQCIVKD-IELGVIGYTIIIQGFCKIGKIDEAVMYF 690
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
EM +RG+ P Y+TL+ + ++A K F EM+ +GI P ++ L
Sbjct: 691 KEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTL 743
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ + +N +I CK+ ++ A ++ D M KR F PD+ ++ I L +
Sbjct: 483 MVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGK 542
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +MK +G +PD+V+YG +I+ +C AK +A E E+ +P+ I+
Sbjct: 543 VEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNA 602
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G G +S+A+ K G +P TYN+++ C + + + + +
Sbjct: 603 LIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKD 662
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I Y I++ K G+ +EA FK M + G P TY ++ + + + A
Sbjct: 663 IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSR-GIPPNKMTYTTLMFAYSKSGNKEEA 721
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+++DEM + G++P Y+TLI+ C D LD + EM
Sbjct: 722 SKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEM 763
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 11/291 (3%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD-GFEPDVVSYG 84
+ RA + F ++ R P IK+ +IL+E G L +V+ EM+D PDV +Y
Sbjct: 156 LSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYT 215
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
MI A C A D A + E+ + +P+ + L++ L R+ EA + G+ +
Sbjct: 216 AMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEG 275
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
P T+ ++ + + ++ EM+ GI PN Y+ ++ + G EA
Sbjct: 276 RVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEA 335
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+F M K G + TV TY ++ + C +++ A +I DEM +L M ++ +L N
Sbjct: 336 LKLFDEMVSK-GIKQTVVTYNLIAKALCKEGEMEHAEKILDEM----LLAGMMVHCSLFN 390
Query: 265 SLCH-----EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
S+ +LD + +EML ++P L + Q L G E A
Sbjct: 391 SVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEA 441
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 147/328 (44%), Gaps = 4/328 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FG+ +N +I C+ H A ++FD+M + + +Y ++ + ++
Sbjct: 307 MQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGE 366
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHC-SAKRYDEAVELFREMEATNCKPSPHIFC 119
+ ++ EM G + ++ H R D + L REM A KP+ +
Sbjct: 367 MEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMT 426
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
I L + EA + + Q +G T NA++ C + +A +++ M
Sbjct: 427 ACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNS 486
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ + TY+I++ KA + +EA + M ++ G +P + T+ I + +C +V+
Sbjct: 487 GVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKR-GFKPDLFTFNIFLHTYCNLGKVEE 545
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+ + D+MK+ G+ P + Y T+I+ C + A +Y E++ G+RP +++ L
Sbjct: 546 ILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIG 605
Query: 300 ALRDEGMEETAVVL--AQKIDKLRKTPL 325
G A+ + K + ++ TP+
Sbjct: 606 GYGRNGNISDAIGILDTMKYNGIQPTPV 633
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 17/251 (6%)
Query: 76 FEPDVVSYGIMINAHCSAK---------------RYDEAVELFREMEATNCKPSPHIFCT 120
F P V+ + ++HC+A A + F E+ A PS
Sbjct: 121 FNPLSVAAAAIADSHCTATADLLVRACLNSPAPGSLSRAADAFLELSARGASPSIKTCSI 180
Query: 121 LINGLGSEKRLSEALQFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L+ LG +L A + FG+ + + P+ TY A++ A C + I+ A+ M+ E+R+
Sbjct: 181 LVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRS 240
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GI P TY++++ L K+GR EEA+ + RM P++ T+ I++ Q
Sbjct: 241 GIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR-VRPSIVTFGILISGLARGQQFGE 299
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+ EM+ G+ P +Y+ +I C + +A K F EM+ GI+ ++ + +
Sbjct: 300 VGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAK 359
Query: 300 ALRDEGMEETA 310
AL EG E A
Sbjct: 360 ALCKEGEMEHA 370
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMK-KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
L++ L ++ A++VF +M+ + PD+ +YT +++ + + + + E++
Sbjct: 181 LVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRS 240
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G +P VV+Y ++++A C + R +EA L M +PS F LI+GL ++ E
Sbjct: 241 GIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEV 300
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ + G P YN ++G +C ++A ++ DEM GI TY+++
Sbjct: 301 GAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKA 360
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY-NAQVDMAMRIWDEMKARGVL 253
L K G E A + M G S + VV ++D+ +R+ EM AR +
Sbjct: 361 LCKEGEMEHAEKILDEM-LLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLK 419
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
P + + I LC K ++A + + ++L G+
Sbjct: 420 PNDALMTACIQELCKSGKHEEAAEIWFQVLGKGL 453
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 132/285 (46%), Gaps = 5/285 (1%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K PD + +I LC++ ++ A + ++++ P + +Y +L++ + +
Sbjct: 205 KTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEE 264
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ M + P +V++GI+I+ +++ E + +EM+ P+ I+ +I
Sbjct: 265 AFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIG 324
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ SEAL+ F + +G + TYN + A C + A +++DEM G+
Sbjct: 325 WHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMV 384
Query: 184 NTRTYD-IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+ ++ +V HL GR + + + M + +P + ++ C + + + A
Sbjct: 385 HCSLFNSVVAWHLRGTGRLDLVLRLIREMLARF-LKPNDALMTACIQELCKSGKHEEAAE 443
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
IW ++ +G+ + + LI+ LC + + +A K + M++ G+
Sbjct: 444 IWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGV 488
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 38/260 (14%)
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK-RLSEALQFFGQSKK 143
I+ +AH SA R+ E + SP + L+ L +++ L A + S+
Sbjct: 73 ILSDAHASASRHAEDL------------LSPRVSTLLLQSLVADRASLPSARRLV--SRL 118
Query: 144 RGFEPEAPTYNAVVGAYCWSM------------------RINDAYRMMDEMRKCGIGPNT 185
F P + A+ ++C + R DA+ E+ G P+
Sbjct: 119 LRFNPLSVAAAAIADSHCTATADLLVRACLNSPAPGSLSRAADAFL---ELSARGASPSI 175
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
+T I++ L G+ + A VF M P V TY +++ C ++D A +
Sbjct: 176 KTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLA 235
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDE 304
E++ G+ P + Y+ L+++LC ++++A + M++ +RP F L L R +
Sbjct: 236 ELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQ 295
Query: 305 GMEETAVVLAQKIDKLRKTP 324
E VL Q++ TP
Sbjct: 296 QFGEVGAVL-QEMQGFGITP 314
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 156/293 (53%), Gaps = 15/293 (5%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+F L+ + DF L+ LC+ ++V A+ + K + D KS+ I+L GW N++
Sbjct: 174 RFKLEMGIDDFQSLLSALCRYKNVSDAEHLI-FCNKDTYPFDAKSFNIVLNGWC---NVI 229
Query: 63 S----MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
V+ EM + G + DVVSY MI+ + ++ ++LF M+ + +P ++
Sbjct: 230 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVY 289
Query: 119 CTLINGLGSEKRLSEALQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+I+ L +SEA +++G EP TYN+++ C + + +A ++ DEM
Sbjct: 290 NAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 349
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G+ P RTY H ++ RT EE + + +M RK G +PTV TY +++R C
Sbjct: 350 EKGLFPTIRTY----HAFMRILRTGEEVFELLAKM-RKMGCQPTVDTYIMLIRKLCRWRD 404
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D + +W+EMK +GV P + Y +I+ L K+++A Y++EM + G+RP
Sbjct: 405 FDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRP 457
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 115/232 (49%), Gaps = 5/232 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ ++ +I K + + ++FD+MKK +PD K Y ++ +
Sbjct: 242 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVYNAVIHALAKASF 301
Query: 61 LLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + + M+++ G EP+VV+Y +I C A++ +EA ++F EM P+ +
Sbjct: 302 VSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 361
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+ L + + E + + +K G +P TY ++ C ++ + +EM++
Sbjct: 362 AFMRILRTGE---EVFELLAKMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEK 418
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
G+GP+ +Y +++H L G+ EEAY +K M K G P + +++ F
Sbjct: 419 GVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEK-GMRPNENVEDMIQSWF 469
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 123/268 (45%), Gaps = 11/268 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI---KSYTILLEGWGQQKNL 61
G + + +++ +I L K R + A + D+M R+F P + ++ I++ + ++
Sbjct: 105 GYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDV 162
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF---REMEATNCKPSPHIF 118
+ K E + + +++A C K +A L ++ + K +
Sbjct: 163 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVL 222
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
N +GS + EA + + + G + + +Y++++ Y +N ++ D M+K
Sbjct: 223 NGWCNVIGSPR---EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 279
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P+ + Y+ V+H L KA EA ++ K M + G EP V TY +++ C + +
Sbjct: 280 ESIEPDRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTE 339
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSL 266
A +++DEM +G+ P + Y + L
Sbjct: 340 EAKQVFDEMLEKGLFPTIRTYHAFMRIL 367
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 160/324 (49%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + + L+D+L + + + + V D+MK + D+ YT ++ + + N
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGN 252
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EV+ E +G EP+ +YG++IN C + + A L +M+ + IF T
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNT 312
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + + AL+ +K G E + TYN + C R+ +A ++ M + G
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ K G EA +F+ M+ K G P+V TY +++ + + A
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGK-GAMPSVVTYNVMMDGYIKKGSIREA 431
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R EM+ +G++P ++ Y++L++ C K+D A K F+EM G P ++ L
Sbjct: 432 ERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISG 491
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG E A L + K TP
Sbjct: 492 LAKEGRSEEAFQLYDDMLKAGLTP 515
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID C+ V+ A +V M+K + D+ +Y L G + + + M
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+ V+Y +I+ HC EA LFREM PS + +++G + +
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIR 429
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA +F + +K+G P+ TY ++V +C + +++ A ++ +EM+ G PN Y ++
Sbjct: 430 EAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALI 489
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
L K GR+EEA+ ++ M K G P S Y +V
Sbjct: 490 SGLAKEGRSEEAFQLYDDM-LKAGLTPDDSLYSALV 524
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G++ ++ +N L LC+ + A+ + M ++ P+ +YT L+ ++ +
Sbjct: 333 MEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGD 392
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++REM G P VV+Y +M++ + EA +EME P + + +
Sbjct: 393 MVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYAS 452
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ AL+ F + K RG EP Y A++ R +A+++ D+M K G
Sbjct: 453 LVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAG 512
Query: 181 IGPNTRTYDIVLHHL 195
+ P+ Y ++ L
Sbjct: 513 LTPDDSLYSALVGSL 527
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 122/282 (43%), Gaps = 36/282 (12%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++D CKS V+ A+ + D+M + + Y LL+ + ++K+ + E+ M++ G
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMENGG 197
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
E V +Y I++++ +A + + EM+A N ++
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYL------------------ 239
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Y AV+ AYC + + A + DE GI PN RTY ++++
Sbjct: 240 -----------------YTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGF 282
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G+ E A + M + G + ++ +C VD A+++ M+ G+
Sbjct: 283 CKIGQMEAAEMLLADMQGR-GVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELD 341
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++ Y+TL LC +++ +A M++ G+ P ++ L
Sbjct: 342 VYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTL 383
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 50/97 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL ++ + L+ C + V+ A ++F++MK R +P++ +YT L+ G ++
Sbjct: 438 MEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGR 497
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD 97
++Y +M G PD Y ++ + + R D
Sbjct: 498 SEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKD 534
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 169/337 (50%), Gaps = 12/337 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K L + N LI+ C+ + A VF K+ K ++P+ ++T L++G + +
Sbjct: 117 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQA 176
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ GF+ + +SYG +I+ C A++L R ++ +P+ ++ T+I+G
Sbjct: 177 LNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDG 236
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +K +++A + + +G P TY+A++ + ++ DA + ++M I P+
Sbjct: 237 MCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPD 296
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I++ K+G+ A + M + G P + TY ++ C +VD A+ +
Sbjct: 297 VYTFNILVDVFCKSGKISYALKLVDEMHDR-GQPPNIVTYSSILDALCKTHRVDKAVALL 355
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML----DIGIRPPGQLFSNL-KQ 299
++K +G+ P MH Y+ LI+ LC KL+DA F+++L DI + +F K+
Sbjct: 356 TKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKK 415
Query: 300 ALRDEG------MEETAVVLAQKIDKLRKTPLVDRGQ 330
L DE MEE + K +L K L +G+
Sbjct: 416 GLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGE 452
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 146/299 (48%), Gaps = 1/299 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+FN+++ +L KS+H + KM+ R P++ + IL+ + Q + V+ ++
Sbjct: 89 EFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 148
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G+ P+ +++ +I C + +A+ ++ A + + + TLI+GL
Sbjct: 149 LKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGET 208
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
AL + + +P Y+ ++ C +NDA+ + EM GI PN TY +
Sbjct: 209 RAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 268
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ G+ ++A +F +M + +P V T+ I+V +FC + ++ A+++ DEM RG
Sbjct: 269 ISGFFTVGKLKDAVDLFNKMISE-NIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRG 327
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P + YS+++++LC ++D A ++ D GIRP ++ L L G E A
Sbjct: 328 QPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDA 386
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 142/278 (51%), Gaps = 1/278 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + + LID LCK A ++ ++ + P++ Y+ +++G + K++
Sbjct: 186 LGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVND 245
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y EM G P+VV+Y +I+ + + +AV+LF +M + N KP + F L++
Sbjct: 246 AFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVD 305
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
++S AL+ + RG P TY++++ A C + R++ A ++ +++ GI P
Sbjct: 306 VFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRP 365
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY I++ L +G+ E+A ++F+ + K G + TV TY ++ FC D A +
Sbjct: 366 NMHTYTILIDGLCTSGKLEDARNIFEDLLVK-GYDITVVTYIVMFYGFCKKGLFDEASAL 424
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
+M+ G +P Y + SL + + D A K +E
Sbjct: 425 LSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 145/308 (47%), Gaps = 1/308 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G F LI LC + +A DK+ F + SY L++G +
Sbjct: 150 KMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETR 209
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ ++ R + +P+VV Y +I+ C K ++A +L+ EM + P+ + LI
Sbjct: 210 AALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 269
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G + +L +A+ F + +P+ T+N +V +C S +I+ A +++DEM G
Sbjct: 270 SGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQP 329
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY +L L K R ++A ++ ++ + G P + TY I++ C + +++ A
Sbjct: 330 PNIVTYSSILDALCKTHRVDKAVALLTKL-KDQGIRPNMHTYTILIDGLCTSGKLEDARN 388
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
I++++ +G + Y + C + D+A +M + G P + + +K +L
Sbjct: 389 IFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLF 448
Query: 303 DEGMEETA 310
+G + A
Sbjct: 449 KKGENDMA 456
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 17/268 (6%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + + ++ + +K Y + L ++ME KP+ LIN + A
Sbjct: 85 PPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 144
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + K G+ P T+ ++ C +I+ A D++ G N +Y ++ L K
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G T A + +R+ K +P V Y ++ C + V+ A ++ EM ++G+ P +
Sbjct: 205 VGETRAALDLLRRVDGKL-VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 263
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS----------------NLKQAL 301
YS LI+ KL DA F +M+ I+P F+ L +
Sbjct: 264 TYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEM 323
Query: 302 RDEGMEETAVVLAQKIDKLRKTPLVDRG 329
D G V + +D L KT VD+
Sbjct: 324 HDRGQPPNIVTYSSILDALCKTHRVDKA 351
>gi|222624423|gb|EEE58555.1| hypothetical protein OsJ_09859 [Oryza sativa Japonica Group]
Length = 858
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 155/316 (49%), Gaps = 5/316 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G QE FN L+ TLC+ + + A+ V+ +K F + +++ ILL GW K+
Sbjct: 180 GDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYE-FKVNRQTFNILLSGW---KSAEDA 235
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM++ G EPD+V+Y +I+ HC + + A +L EM + P + +LI G
Sbjct: 236 EAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGG 295
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
LG + +A + + G P+ P YN + + + R+ DA+ +M+EM G+ PN
Sbjct: 296 LGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPN 355
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY++ A A+ +++RM R G P + +VR+ + +V A+ +W
Sbjct: 356 ATTYNLFFRCYYWAYDIGSAWQLYERM-RSEGCFPNTQSCMFIVRLCHRHGRVAQALELW 414
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M G + L + LC E KLD+A + F +M+++G +P F +K ++
Sbjct: 415 SDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLA 474
Query: 305 GMEETAVVLAQKIDKL 320
EE+ L ++ +
Sbjct: 475 NREESIARLTAQMAQF 490
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
C++ + S +RLS L + RG + E +NA++ C ++DA + + K
Sbjct: 160 CSVRETVDSFRRLSRML------RGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHAL-K 212
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
N +T++I L+ ++ E F R+ G EP + TY ++ C N V+
Sbjct: 213 YEFKVNRQTFNI----LLSGWKSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVE 268
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A ++ DEM+ + + P + Y++LI L + D A +EM ++G P
Sbjct: 269 NAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYP 319
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 94/248 (37%), Gaps = 35/248 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI--------------- 45
M + G++ +L +N LID CK+R VE A ++ D+M+++ PD+
Sbjct: 242 MRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQ 301
Query: 46 --------------------KSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+Y + + K L + EM G P+ +Y +
Sbjct: 302 PDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNL 361
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+ A A +L+ M + C P+ ++ R+++AL+ + G
Sbjct: 362 FFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNG 421
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F + + C ++++A R +M + G P+ + + + A R E
Sbjct: 422 FGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLANREESIA 481
Query: 206 SVFKRMSR 213
+ +M++
Sbjct: 482 RLTAQMAQ 489
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 150/311 (48%), Gaps = 4/311 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD +N +ID LCK + V A + + +M R PD+ +Y+ L+ G+ L+ +
Sbjct: 270 PDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSL 329
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
EM PDV +Y I+I+A C + EA L M KP+ + TL++G
Sbjct: 330 LNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCL 389
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+ A Q F + P +YN ++ C +++A ++ EM + PNT T
Sbjct: 390 VGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVT 449
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y+ ++ L K+GR A + K + + G V TY ++ C N +D A+ ++ +M
Sbjct: 450 YNSLIDGLCKSGRITSALDLMKELHHR-GQPADVITYTSLLDGLCKNQNLDKAIALFMKM 508
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
K RG+ P + Y+ LI+ LC +L +A K FQ +L G ++ + L EGM
Sbjct: 509 KERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGML 568
Query: 308 ETAVVLAQKID 318
+ A+ + K++
Sbjct: 569 DEALAMKSKME 579
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 143/290 (49%), Gaps = 4/290 (1%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+++ LK PD + LID LCK ++ A+ + M K P++ +Y+ L++G+
Sbjct: 330 LNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCL 389
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + +++ M P V SY IMIN C K DEA+ L REM N P+
Sbjct: 390 VGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVT 449
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LI+GL R++ AL + RG + TY +++ C + ++ A + +M+
Sbjct: 450 YNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMK 509
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ GI PN TY ++ L K R + A +F+ + K G V TY +++ C +
Sbjct: 510 ERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVK-GCCIDVYTYNVMIGGLCKEGML 568
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
D A+ + +M+ G +P + +I SL +D+ D A K EM+ G+
Sbjct: 569 DEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + L++ LCK A ++ ++ R PD+ Y +++G + K +
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ Y EM G PDV++Y +I C A + A L EM N P + + LI+
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E +L EA G K G +P TY+ ++ YC +++A ++ M + + P+
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+I+++ L K +EA ++ + M K P TY ++ C + ++ A+ +
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREMLHK-NVVPNTVTYNSLIDGLCKSGRITSALDLM 470
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
E+ RG + Y++L++ LC LD A F +M + GI+P ++ L L
Sbjct: 471 KELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 530
Query: 305 GMEETAVVLAQKI 317
+ A L Q I
Sbjct: 531 ARLKNAQKLFQHI 543
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 147/306 (48%), Gaps = 3/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ ++ ++ LI C + + A + ++M + +PD+ +YTIL++ ++
Sbjct: 298 MNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGK 357
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + M +G +P+VV+Y +++ +C A ++F M T PS +
Sbjct: 358 LKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNI 417
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL K + EA+ + + P TYN+++ C S RI A +M E+ G
Sbjct: 418 MINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY +L L K ++A ++F +M + G +P TY ++ C A++ A
Sbjct: 478 QPADVITYTSLLDGLCKNQNLDKAIALFMKMKER-GIQPNKYTYTALIDGLCKGARLKNA 536
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ + +G ++ Y+ +I LC E LD+A +M D G P F + ++
Sbjct: 537 QKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRS 596
Query: 301 L--RDE 304
L +DE
Sbjct: 597 LFEKDE 602
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 127/253 (50%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+K + ++ L+D C V A+++F M + +P + SY I++ G + K+
Sbjct: 368 MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKS 427
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + REM P+ V+Y +I+ C + R A++L +E+ + +
Sbjct: 428 VDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTS 487
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL + L +A+ F + K+RG +P TY A++ C R+ +A ++ + G
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKG 547
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY++++ L K G +EA ++ +M G P T+EI++R + D A
Sbjct: 548 CCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDN-GCIPDAVTFEIIIRSLFEKDENDKA 606
Query: 241 MRIWDEMKARGVL 253
++ EM A+G+L
Sbjct: 607 EKLLHEMIAKGLL 619
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 1/272 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
V A F+ M R P I + +L + K+ + + ++M+ G EPD+V+ I
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN C + + + ++ +P+ I TL+ GL + + ++L F + +G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+ +Y ++ C A +++ + P+ Y+ ++ L K EAY
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ M+ + G P V TY ++ FC Q+ A + +EM + + P ++ Y+ LI++
Sbjct: 293 DFYTEMNSR-GIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
LC E KL +A M G++P +S L
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTL 383
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 2/166 (1%)
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
QF G R P + ++G+ A + +M GI P+ T I+++
Sbjct: 119 QFNGMLLMRN-TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCF 177
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
G+ ++SV ++ K G +P +++ C +V ++ D++ A+G
Sbjct: 178 CHLGQMAFSFSVLGKI-LKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMN 236
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
Y TL+N LC + A K + + D RP +++ + L
Sbjct: 237 QVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGL 282
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 1/159 (0%)
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++DA + M P+ + +L L+K A S+ K+M K G EP + T
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVK-GIEPDLVTLS 171
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
I++ FC+ Q+ + + ++ G P + +TL+ LC + ++ + + +++
Sbjct: 172 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQ 231
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G + + L L G A+ L + I+ P
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRP 270
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 147/289 (50%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL+ + FN LI+ CKS ++++ + M + R PD+ +Y++L+ G ++
Sbjct: 251 IGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ 310
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N+++ EM D G P+ V++ +IN HC R D +E++++M KP + T
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT 370
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL L EA + + +RG +P+ TY ++ C + A + EM K G
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + + ++ + G+ EA + M + G +P +TY +V+ FC V
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREM-LEAGIKPDDATYTMVIHGFCKKGDVKTG 489
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ EM+ G +P + Y+ L+N LC + ++ +A ML++G+ P
Sbjct: 490 FKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVP 538
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 142/302 (47%), Gaps = 1/302 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L D L K A ++++ + PD+ + +L+ ++ + ++ E+ G
Sbjct: 196 LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRG 255
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P VVS+ +IN +C + D+ L R M P + LINGL E +L +A
Sbjct: 256 LRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDAN 315
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + RG P T+ ++ +C + R + + +M + G+ P+ TY+ +++ L
Sbjct: 316 KLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGL 375
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G EA + M+++ G +P TY +++ C ++ A+ I EM G+
Sbjct: 376 CKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELD 434
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
++ LI+ C E ++ +A + +EML+ GI+P ++ + +G +T L +
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494
Query: 316 KI 317
++
Sbjct: 495 EM 496
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 20/318 (6%)
Query: 20 LCKSRHVERAQEVFDKMKKRRFDPDIKS-YTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
LC + + AQ + + R+ S +T +LE G ++ L + + D G+
Sbjct: 113 LCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFS 172
Query: 79 DVVS-------YGIMINAHCSAKRYDEAVEL--------FREMEATNCKPSPHI--FCTL 121
D + + + I H +D ++L F E E +C P + F L
Sbjct: 173 DAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYE-EILDCGYPPDVCKFNVL 231
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++ L E +++EA FG+ KRG P ++N ++ YC S ++ +R+ M + +
Sbjct: 232 MHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRV 291
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY ++++ L K G+ ++A +F M + G P T+ ++ C + D+ M
Sbjct: 292 FPDVFTYSVLINGLCKEGQLDDANKLFLEMCDR-GLVPNDVTFTTLINGHCVTGRADLGM 350
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I+ +M +GV P + Y+TLIN LC L +A K EM G++P ++ L
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC 410
Query: 302 RDEGMEETAVVLAQKIDK 319
EG E+A+ + +++ K
Sbjct: 411 CKEGDLESALEIRKEMVK 428
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N LI+ LCK + A+++ +M +R PD +YT+L++G ++ +L S
Sbjct: 360 GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESA 419
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ +EM +G E D V++ +I+ C + EA REM KP + +I+G
Sbjct: 420 LEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHG 479
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + + + + G P TYN ++ C ++ +A ++D M G+ P+
Sbjct: 480 FCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPD 539
Query: 185 TRTYDIVLHHLIKA 198
TY+I+L ++A
Sbjct: 540 DITYNILLERTLQA 553
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 53/236 (22%)
Query: 114 SPHIFCTLINGLGSEKRLSEA---LQFFGQSK--------------KRGFEPEAPTYNAV 156
S H +CT+ + L + K LSEA LQF K RG ++ +
Sbjct: 102 SIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVL 161
Query: 157 VGAYCWSMRINDAY-----------------------RMM------------DEMRKCGI 181
+ AY S +DA R+M +E+ CG
Sbjct: 162 MNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGY 221
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ +++++H L K + EA +F + ++ G PTV ++ ++ +C + +D
Sbjct: 222 PPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKR-GLRPTVVSFNTLINGYCKSGNLDQGF 280
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R+ M V P + YS LIN LC E +LDDA K F EM D G+ P F+ L
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTL 336
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + + LID CK +E A E+ +M K + D ++T L+ G+ ++
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ REM + G +PD +Y ++I+ C +L +EM+ P +
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
L+NGL + ++ A G P+ TYN ++
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 155/305 (50%), Gaps = 2/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++KFG + ++ +N LI+ CK ++ A V D+M+ + F PD +Y I++ +
Sbjct: 146 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 204
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +V ++ D +P V++Y I+I A DEA++L EM + KP + T
Sbjct: 205 LDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNT 264
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G+ E + A + + +G EP+ +YN ++ A + + ++M +M
Sbjct: 265 IIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY I++ L + G+ EEA ++ K M K G P +Y+ ++ FC ++D+A
Sbjct: 325 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAFCREGRLDVA 383
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + G LP + Y+T++ +LC K D A + F ++ ++G P ++ + A
Sbjct: 384 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 443
Query: 301 LRDEG 305
L G
Sbjct: 444 LWSSG 448
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 155/310 (50%), Gaps = 2/310 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+LI R+V +A V + ++K PD+ +Y L+ G+ + + V M+
Sbjct: 125 KLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 183
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
F PD V+Y IMI + CS + D A+++ ++ + NC+P+ + LI E + EA
Sbjct: 184 DFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEA 243
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L+ + RG +P+ TYN ++ C ++ A+ M+ + G P+ +Y+I+L
Sbjct: 244 LKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRA 303
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L+ G+ EE + +M + +P V TY I++ C + +++ AM + MK +G+ P
Sbjct: 304 LLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 362
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ Y LI + C E +LD A ++ + M+ G P ++ + L G + A+ +
Sbjct: 363 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 422
Query: 315 QKIDKLRKTP 324
K+ ++ +P
Sbjct: 423 GKLGEVGCSP 432
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 144/316 (45%), Gaps = 1/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK ++ +N +I +CK V+RA E+ ++ + +PD+ SY ILL Q
Sbjct: 254 GLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEG 313
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M + +P+VV+Y I+I C + +EA+ L + M+ P + + LI
Sbjct: 314 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 373
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E RL A++F G P+ YN V+ C + + + A + ++ + G PN
Sbjct: 374 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 433
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ +Y+ + L +G A + M G +P TY ++ C VD A +
Sbjct: 434 SSSYNTMFSALWSSGDKIRALHMILEMVSN-GIDPDEITYNSMISCLCREGMVDKAFELL 492
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M++ P + Y+ ++ C +++DA M+ G RP ++ L + +
Sbjct: 493 VDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFA 552
Query: 305 GMEETAVVLAQKIDKL 320
G A+ LA + ++
Sbjct: 553 GYRAEAMELANDLVRI 568
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCT-LINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C + Y E++ L M P I CT LI G + + + +A++ +K G +P+
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDV-ILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPD 153
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
YNA++ +C RI+DA R++D MR P+T TY+I++ L G+ + A V
Sbjct: 154 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLD 213
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
++ +PTV TY I++ VD A+++ DEM +RG+ P M Y+T+I +C E
Sbjct: 214 QL-LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKE 272
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+D A + + + G P ++ L +AL ++G E L K+
Sbjct: 273 GMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 320
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I LC+ V++A E+ M+ F P + +Y I+L G+ + +
Sbjct: 464 GIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 523
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
+V M +G P+ +Y ++I A EA+EL ++ N
Sbjct: 524 IDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIN 569
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 155/305 (50%), Gaps = 2/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++KFG + ++ +N LI+ CK ++ A V D+M+ + F PD +Y I++ +
Sbjct: 150 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +V ++ D +P V++Y I+I A DEA++L EM + KP + T
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G+ E + A + + +G EP+ +YN ++ A + + ++M +M
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY I++ L + G+ EEA ++ K M K G P +Y+ ++ FC ++D+A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + G LP + Y+T++ +LC K D A + F ++ ++G P ++ + A
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 301 LRDEG 305
L G
Sbjct: 448 LWSSG 452
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 155/310 (50%), Gaps = 2/310 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+LI R++ +A V + ++K PD+ +Y L+ G+ + + V M+
Sbjct: 129 KLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
F PD V+Y IMI + CS + D A+++ ++ + NC+P+ + LI E + EA
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L+ + RG +P+ TYN ++ C ++ A+ M+ + G P+ +Y+I+L
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRA 307
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L+ G+ EE + +M + +P V TY I++ C + +++ AM + MK +G+ P
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ Y LI + C E +LD A ++ + M+ G P ++ + L G + A+ +
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426
Query: 315 QKIDKLRKTP 324
K+ ++ +P
Sbjct: 427 GKLGEVGCSP 436
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 3/317 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK ++ +N +I +CK V+RA E+ ++ + +PD+ SY ILL Q
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEG 317
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M + +P+VV+Y I+I C + +EA+ L + M+ P + + LI
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E RL A++F G P+ YN V+ C + + + A + ++ + G PN
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 185 TRTYDIVLHHLIKAG-RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ +Y+ + L +G + + + + MS G +P TY ++ C VD A +
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSN--GIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+M++ P + Y+ ++ C +++DA + M+ G RP ++ L + +
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555
Query: 304 EGMEETAVVLAQKIDKL 320
G A+ LA + ++
Sbjct: 556 AGYRAEAMELANDLVRI 572
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCT-LINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C + Y E++ L M P I CT LI G + + + +A++ +K G +P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDV-ILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPD 157
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
YNA++ +C RI+DA R++D MR P+T TY+I++ L G+ + A V
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
++ +PTV TY I++ VD A+++ DEM +RG+ P M Y+T+I +C E
Sbjct: 218 QL-LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+D A + + + G P ++ L +AL ++G E L K+
Sbjct: 277 GMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 153/311 (49%), Gaps = 2/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + +N L+ LCK+ + M R P++ ++ +LL+ + ++
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L NE+Y+EM G P++++Y +++ +C R EA + M C P F +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ + ++ F KRG A TY+ +V +C S +I A + EM G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G+ E+A +F+ + +K + + Y ++ C +V+ A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I+ LC + L +A ++M + G P ++ L +A
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 301 -LRDEGMEETA 310
LRD + +A
Sbjct: 553 HLRDGDLTASA 563
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 151/287 (52%), Gaps = 5/287 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ +N +++ +C+S A ++ KM++R D+ +Y+ +++ + + +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G + VV+Y ++ C A ++++ L ++M + P+ F L++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + RG P TYN ++ YC R+++A M+D M + P+
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++ R ++ VF+ +S++ G TY I+V+ FC + ++ +A ++
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM----LDIGI 287
EM + GVLP + Y L++ LC KL+ A + F+++ +D+GI
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 36/350 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + N +I+ C+ A V K+ K ++PD ++ L++G + +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M ++G +PDVV+Y ++N C + A++L R+ME N K + T+I+
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + A+ F + + +G + TYN++V C + + ND ++ +M I PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI------------------ 226
T++++L +K G+ +EA ++K M + G P + TY
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 227 -----------------VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+++ +C +VD M+++ + RG++ YS L+ C
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
K+ A + FQEM+ G+ P + L L D G E A+ + + + K
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A +F +M + R P + ++ + K + + ++++ +G ++ + IMIN
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C + A + ++ +P F TLI GL E ++SEA+ + + G +P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ TYN++V C S + A ++ +M + + + TY ++ L + G + A S+F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
K M K G + +V TY +VR C + + + +M +R ++P + ++ L++
Sbjct: 252 KEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 269 EDKLDDACKYFQEMLDIGIRP 289
E KL +A + ++EM+ GI P
Sbjct: 311 EGKLQEANELYKEMITRGISP 331
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ F LI C + V+ +VF + KR + +Y+IL++G+ Q + E++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+EM G PDV++YGI+++ C + ++A+E+F +++ + ++ T+I G+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ +A F +G +P TY ++ C +++A ++ +M + G PN TY
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ ++ ++ G + + + M + G S+ ++V+ M
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEM-KSCGFSADASSIKMVIDML 588
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+ D+A+ LF+EM + PS F + + K+ + L F Q + G T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ +C + AY ++ ++ K G P+T T++ ++ L G+ EA + RM
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G +P V TY +V C + +A+ + +M+ R V + YST+I+SLC + +D
Sbjct: 188 -GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A F+EM GI+ +++L + L G
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ L+ C+S ++ A+E+F +M PD+ +Y ILL+G
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ +++ + +V Y +I C + ++A LF + KP+ +
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + LSEA + ++ G P TYN ++ A+ + + ++++EM+ CG
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAY 205
+ + +V+ L+ +G ++++
Sbjct: 574 FSADASSIKMVIDMLL-SGELDKSF 597
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 161/313 (51%), Gaps = 6/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I+ CK V+ A++ KM + PD + T + G+ + K++ S V+ EM
Sbjct: 195 FNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP 254
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ + VSY +I+ C A R DEAV LF M+ C P+ + + LI GL K +
Sbjct: 255 NR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGL-CRKNVH 309
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ + +R P+ TYN+++ C + ++ AYR++ M++ G+ P+ RTY +
Sbjct: 310 KAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFI 369
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+ R EEA +F ++ + G V Y +++ +C +VD A ++++M ++
Sbjct: 370 DFLCKSNRVEEARRLFDSLTEE-GVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNC 428
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + ++ LI+ LC L +A F +M+ +G++P F+ L + +G + A
Sbjct: 429 SPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHK 488
Query: 313 LAQKIDKLRKTPL 325
QK+ + P+
Sbjct: 489 CLQKMMSSGEKPV 501
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 2/292 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LC+ ++V +A + D+M +R PD+ +Y L+ G + +L S + MK
Sbjct: 296 YTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMK 354
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G PD +YG I+ C + R +EA LF + + ++ LI+G ++
Sbjct: 355 ERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVD 414
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + + P A T+NA++ C + + +A + D+M K G+ P T++I++
Sbjct: 415 EAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILI 474
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
++K G ++A+ ++M G +P TY + ++C +V A + +MK GV
Sbjct: 475 GRMLKQGDFDDAHKCLQKM-MSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGV 533
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
P Y++LI + A + M D P F +L + L D+
Sbjct: 534 PPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDK 585
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L +L +N LI C++ H++ A + MK+R PD ++Y ++ + +
Sbjct: 323 LVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEAR 382
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ + ++G +V+ Y ++I+ +C + DEA LF +M + NC P+ + F LI+GL
Sbjct: 383 RLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGL 442
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
S L EAL F Q K G +P T+N ++G +DA++ + +M G P
Sbjct: 443 CSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVA 502
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
RTY+ + AG+ +EA + +M ++ G P TY +++ + A +
Sbjct: 503 RTYNAFIEVYCSAGKVQEAEDMMVQM-KEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLK 561
Query: 246 EMKARGVLPVMHMYSTLINSL 266
M P H + +LI L
Sbjct: 562 SMFDADCEPSHHTFLSLIKQL 582
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 142/323 (43%), Gaps = 28/323 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + ID LCKS VE A+ +FD + + ++ Y++L++G+ +
Sbjct: 353 MKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGK 412
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M P+ ++ +I+ CSA EA+ LF +M KP+ + F
Sbjct: 413 VDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNI 472
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + + +A + + G +P A TYNA + YC + ++ +A MM +M++ G
Sbjct: 473 LIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM----------------------------S 212
+ P+ TY ++ K G T A+ V K M S
Sbjct: 533 VPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKS 592
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
+ G E + ++ + D+ + +++EM+ G P Y LI+ +C + L
Sbjct: 593 GETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENL 652
Query: 273 DDACKYFQEMLDIGIRPPGQLFS 295
A K +M GI P +F+
Sbjct: 653 GIALKLLDQMQKEGISPSEMVFN 675
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 6/320 (1%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K L +N L+ L + V+ +++ +M + DI ++ +++ + + + +
Sbjct: 154 KLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQ 213
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+M G PD + I +C +K D A +F EM N + LI+GL
Sbjct: 214 FMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN----EVSYNQLIHGLC 269
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA+ F + K P TY A++ C ++ A ++DEM + + P+
Sbjct: 270 EAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLI 328
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++ +AG + AY + M + G P TY + C + +V+ A R++D
Sbjct: 329 TYNSLIAGQCRAGHLDSAYRLLSLMKER-GLVPDQRTYGCFIDFLCKSNRVEEARRLFDS 387
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
+ GV + MYS LI+ C K+D+A F++ML P F+ L L G
Sbjct: 388 LTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGN 447
Query: 307 EETAVVLAQKIDKLRKTPLV 326
+ A+ L ++ K+ P V
Sbjct: 448 LKEALSLFDQMVKMGLKPTV 467
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 23/285 (8%)
Query: 62 LSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++++ R+M KDD + + Y ++ DE +L+ EM + F
Sbjct: 138 LFVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNL 197
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN + EA QF + + G P+ T + + YC S ++ A+R+ +EM
Sbjct: 198 MINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPN-- 255
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N +Y+ ++H L +AGR +EA S+F RM + P V TY +++ C V A
Sbjct: 256 --RNEVSYNQLIHGLCEAGRIDEAVSLFVRM-KDDCCYPNVYTYTALIKGLC-RKNVHKA 311
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF------ 294
M + DEM R ++P + Y++LI C LD A + M + G+ P + +
Sbjct: 312 MGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDF 371
Query: 295 ---SN-------LKQALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
SN L +L +EG+ ++ + ID K VD
Sbjct: 372 LCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEA 416
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 32/288 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N I+ C + V+ A+++ +MK+ PD +YT L++ +G+ S +V + M
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMF 564
Query: 73 DDGFEPDVVSYGIMINAHCSAKRY------------------------------DEAVEL 102
D EP ++ +I KRY D +EL
Sbjct: 565 DADCEPSHHTFLSLIK-QLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIEL 623
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
F EME C P + LI+G+ + L AL+ Q +K G P +NAV+ C
Sbjct: 624 FEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCK 683
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
+ +A ++++M G P ++ L + G TE SVFK++ R G
Sbjct: 684 LQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKL-RGCGYNDDEI 742
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
++I++ V+ ++++EM+ G YS L L +D
Sbjct: 743 AWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHGKD 790
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ FN +I CK + A + + M P ++ L+ G ++
Sbjct: 662 MQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGE 721
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
N V+++++ G+ D +++ I+I+ +E +LF EME C SP +
Sbjct: 722 TERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSI 781
Query: 121 LINGL 125
L L
Sbjct: 782 LTQKL 786
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 18/319 (5%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K+ PD +N +I+ C S A+++ +M +R+ +PD+ +++ L+ + ++
Sbjct: 282 KEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFE 341
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E+Y EM P V+Y MI+ C R D A +F C P F TLI
Sbjct: 342 AEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIA 401
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G KR+ + ++ + + G TY ++ +C +N A ++ EM G+ P
Sbjct: 402 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCP 461
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRMFCY 233
N T + +L L G+ ++A +FK M + G EP V TY I++
Sbjct: 462 NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLIN 521
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+ A +++EM RG++P YS++I+ LC + +LD+A + F M P
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVT 581
Query: 294 FSNL-----KQALRDEGME 307
F+ L K + D+G+E
Sbjct: 582 FNTLITGYCKAGMVDDGLE 600
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 157/318 (49%), Gaps = 6/318 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G + FN L+ LC + A ++F +M K P++ ++T L+ G ++
Sbjct: 142 ITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGR 197
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
++ + M +DG +P+ ++YG +++ C A+ L R+M E ++ P+ I+
Sbjct: 198 VVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYN 257
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+I+GL + R S+A F + +++ P+ TYN ++ +C S R +DA +++ EM +
Sbjct: 258 TIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLER 317
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I P+ T+ +++ +K G+ EA ++ M + P+ TY ++ FC ++D
Sbjct: 318 KINPDVVTFSALINAFVKEGKFFEAEELYDEMLPR-SIIPSTVTYSSMIDGFCKQNRLDA 376
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ +G P + ++TLI C ++DD K EM + G+ ++ L
Sbjct: 377 AEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 436
Query: 300 ALRDEGMEETAVVLAQKI 317
G A L Q++
Sbjct: 437 GFCQVGDLNAAQDLLQEM 454
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 147/316 (46%), Gaps = 12/316 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +ID CK ++ A+ +F + PDI ++ L+ G+ + K + ++ EM
Sbjct: 361 YSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 420
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G + ++Y +I+ C + A +L +EM ++ P+ TL++GL +L
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480
Query: 133 EALQFFGQSKK-----------RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+AL+ F +K G EP+ TYN ++ + +A + +EM GI
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+T TY ++ L K R +EA +F M K + P V T+ ++ +C VD +
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFS-PDVVTFNTLITGYCKAGMVDDGL 599
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ EM RG++ Y TLI D +D A FQEM+ G+ P N+ L
Sbjct: 600 ELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGL 659
Query: 302 RDEGMEETAVVLAQKI 317
+ E AV + + +
Sbjct: 660 WSKEELERAVAMLEDL 675
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 142/308 (46%), Gaps = 12/308 (3%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ ++ F+ LI+ K A+E++D+M R P +Y+ +++G+ +Q L +
Sbjct: 319 INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE 378
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ G PD++++ +I +C AKR D+ ++L EM + + TLI+G
Sbjct: 379 HMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 438
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC------ 179
L+ A + G P T N ++ C + ++ DA M M+K
Sbjct: 439 CQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 498
Query: 180 -----GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
G+ P+ +TY+I++ LI G+ EA +++ M + G P TY ++ C
Sbjct: 499 SRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQ 557
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+++D A +++D M ++ P + ++TLI C +DD + F EM GI +
Sbjct: 558 SRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITY 617
Query: 295 SNLKQALR 302
L R
Sbjct: 618 ITLIYGFR 625
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
S+ I++ CS + A+ F ++ P+ F TL++GL E R+SEAL F Q
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
K P T+ ++ C R+ +A ++D M + G+ PN TY ++ + K G T
Sbjct: 178 CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
A ++ ++M P V Y ++ + + A ++ EM+ + + P + Y+
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+IN C + DA + QEML+ I P FS L A EG
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEG 337
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFD-----------PDIKSYTILLEGWGQQKNLL 62
N L+D LC + ++ A E+F M+K + D PD+++Y IL+ G + L
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFL 526
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E+Y EM G PD ++Y MI+ C R DEA ++F M + + P F TLI
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
G + + L+ F + +RG +A TY ++ + I+ A + EM G+
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVY 646
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
P+T T +L L E A ++ + + G
Sbjct: 647 PDTITIRNMLTGLWSKEELERAVAMLEDLQMSVG 680
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 11/222 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M + GL + LI C+ + AQ++ +M P++ + LL+G G+
Sbjct: 419 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478
Query: 58 QKNLLSMNEVYREMKDD--------GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
K+ L M + ++ K D G EPDV +Y I+I + ++ EA EL+ EM
Sbjct: 479 LKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHR 538
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
P + ++I+GL + RL EA Q F + F P+ T+N ++ YC + ++D
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDG 598
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ EM + GI + TY +++ K + A +F+ M
Sbjct: 599 LELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEM 640
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N LI L A+E++++M R PD +Y+ +++G +Q L
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M F PDVV++ +I +C A D+ +ELF EM + TLI G
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ AL F + G P+ T ++ + A M+++++
Sbjct: 624 FRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 5/200 (2%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L +G K L +A+ FG + P + ++G R + + +M
Sbjct: 52 LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N ++ I++ + A S F +++ K G PTV T+ ++ C ++ A
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKIT-KLGFHPTVVTFNTLLHGLCVEDRISEA 170
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ +M P + ++TL+N LC E ++ +A ML+ G++P + +
Sbjct: 171 LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDG 226
Query: 301 LRDEGMEETAVVLAQKIDKL 320
+ G +A+ L +K++++
Sbjct: 227 MCKMGDTVSALNLLRKMEEV 246
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 153/320 (47%), Gaps = 2/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N L++ CK R +A E+ D M+ P+ +Y +L++G + ++
Sbjct: 37 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 96
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ R + G +P V+Y ++ CSA+R+ +A EL EM NC P+ F +I
Sbjct: 97 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 156
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + L +A+Q + K G TYNA++ C ++ A ++ +M+ G P+
Sbjct: 157 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 216
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +L L A R +A + M++ G P T+ ++ C + A+ ++
Sbjct: 217 IVTYNTLLKGLCSAARWVDAEELMDNMTQN-GCLPDNVTFNTLIGFLCQKGLMVDAIEVF 275
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M +G P YST+I+ L KLD A + F EM G P +++ L + L D+
Sbjct: 276 KQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDD 334
Query: 305 GMEETAVVLAQKIDKLRKTP 324
E A+ +K+ +P
Sbjct: 335 DTIEEAIQTVRKLQDSGISP 354
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 143/289 (49%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI TLC+ V A V D M R PD+ +Y ILLE + + E+ M+
Sbjct: 10 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 69
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G P+ V+Y ++++ C D+A+EL R + + CKPS + T++ GL S +R
Sbjct: 70 AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 129
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + + P T+N V+ + C + A +++++M K G N TY+ ++
Sbjct: 130 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 189
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L + + A + +M + G +P + TY +++ C A+ A + D M G
Sbjct: 190 NGLCEQRNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGC 248
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
LP ++TLI LC + + DA + F++M D G P +S + L
Sbjct: 249 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 297
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 8/281 (2%)
Query: 43 PDIKSYTILLEGW---GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
P+ +Y L+ GQ ++ LS V +M G PDVV+Y I++ A C + Y +A
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALS---VLDDMLCRGCAPDVVTYNILLEATCKGRGYRQA 61
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+EL M A C P+ + L++G+ E + +AL+ G +P YN V+
Sbjct: 62 MELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 121
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
C + R DA ++ EM + PN T+++V++ L + G ++A + ++MS K G
Sbjct: 122 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS-KHGCTA 180
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
+ TY ++ C VD AM + +MK+ G P + Y+TL+ LC + DA +
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAV-VLAQKIDK 319
M G P F+ L L +G+ A+ V Q DK
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDK 281
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 2/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N +I+ LC+ R+V+ A + KMK PDI +Y LL+G
Sbjct: 173 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAR 232
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ M +G PD V++ +I C +A+E+F++M C P+ + T
Sbjct: 233 WVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYST 292
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL +L +AL+ F + +GF P+ Y + I +A + + +++ G
Sbjct: 293 IISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSG 351
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T Y+ +L L + G+TE A + M G P TY I++ Y ++ A
Sbjct: 352 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSS-GCMPDDLTYVILIEGLAYEGYLNEA 410
Query: 241 MRIWDEMKARGVL 253
+ ++ +R VL
Sbjct: 411 RELLIKLCSRDVL 423
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 98/226 (43%), Gaps = 1/226 (0%)
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+P+ +Y +I+ C + +A+ + +M C P + L+ + +A+
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + G P TYN ++ C ++DA ++ + G P+T Y+ VL L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
A R +A + M R+ P +T+ +V+ C + A+++ ++M G
Sbjct: 123 CSAERWGDADELVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ Y+ +IN LC + +D A +M G +P ++ L + L
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 227
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%)
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+P TY ++ C QV A+ + D+M RG P + Y+ L+ + C A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ M G P ++ L + EG + A+ L + +
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNL 103
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 153/311 (49%), Gaps = 2/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + +N L+ LCK+ + M R P++ ++ +LL+ + ++
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L NE+Y+EM G P++++Y +++ +C R EA + M C P F +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ + ++ F KRG A TY+ +V +C S +I A + EM G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G+ E+A +F+ + +K + + Y ++ C +V+ A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I+ LC + L +A ++M + G P ++ L +A
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 301 -LRDEGMEETA 310
LRD + +A
Sbjct: 553 HLRDGDLTASA 563
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 151/287 (52%), Gaps = 5/287 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ +N +++ +C+S A ++ KM++R D+ +Y+ +++ + + +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G + VV+Y ++ C A ++++ L ++M + P+ F L++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + RG P TYN ++ YC R+++A M+D M + P+
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++ R ++ VF+ +S++ G TY I+V+ FC + ++ +A ++
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM----LDIGI 287
EM + GVLP + Y L++ LC KL+ A + F+++ +D+GI
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 36/350 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + N +I+ C+ A V K+ K ++PD ++ L++G + +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M ++G +PDVV+Y ++N C + A++L R+ME N K + T+I+
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + A+ F + + +G + TYN++V C + + ND ++ +M I PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI------------------ 226
T++++L +K G+ +EA ++K M + G P + TY
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 227 -----------------VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+++ +C +VD M+++ + RG++ YS L+ C
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
K+ A + FQEM+ G+ P + L L D G E A+ + + + K
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A +F +M + R P + ++ + K + + ++++ +G ++ + IMIN
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C + A + ++ +P F TLI GL E ++SEA+ + + G +P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ TYN++V C S + A ++ +M + + + TY ++ L + G + A S+F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
K M K G + +V TY +VR C + + + +M +R ++P + ++ L++
Sbjct: 252 KEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 269 EDKLDDACKYFQEMLDIGIRP 289
E KL +A + ++EM+ GI P
Sbjct: 311 EGKLQEANELYKEMITRGISP 331
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ F LI C + V+ +VF + KR + +Y+IL++G+ Q + E++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+EM G PDV++YGI+++ C + ++A+E+F +++ + ++ T+I G+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ +A F +G +P TY ++ C +++A ++ +M + G PN TY
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ ++ ++ G + + + M + G S+ ++V+ M
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEM-KSCGFSADASSIKMVIDML 588
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+ D+A+ LF+EM + PS F + + K+ + L F Q + G T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ +C + AY ++ ++ K G P+T T++ ++ L G+ EA + RM
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G +P V TY +V C + +A+ + +M+ R V + YST+I+SLC + +D
Sbjct: 188 -GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A F+EM GI+ +++L + L G
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 96/198 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ L+ C+S ++ A+E+F +M PD+ +Y ILL+G
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ +++ + +V Y +I C + ++A LF + KP+ +
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + LSEA + ++ G P TYN ++ A+ + + ++++EM+ CG
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 181 IGPNTRTYDIVLHHLIKA 198
+ + +V+ L+ A
Sbjct: 574 FSADASSIKMVIDMLLSA 591
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L+D LC + +E+A E+F+ ++K + D I YT ++EG + +
Sbjct: 435 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ + G +P+V++Y +MI+ C EA L R+ME P+ + TLI
Sbjct: 495 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 554
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
+ L+ + + + K GF +A + V+ +M+
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 147/313 (46%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ +N +I +CK VERA E+ + + PD+ SY ILL + Q
Sbjct: 237 GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEG 296
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G EP+ V+Y I+I++ C R DEA+ + + M P + + LI+
Sbjct: 297 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 356
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E RL A+ G P+ YN ++ A C + N A + +++R G PN
Sbjct: 357 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 416
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ ++ L G A + M K G +P TY ++ C + V+ A+ +
Sbjct: 417 VSSYNTMISALWSCGDRSRALGMVPAMISK-GVDPDEITYNSLISCLCRDGLVEEAIGLL 475
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M+ G P + Y+ ++ LC ++DDA F EM++ G RP + L + +
Sbjct: 476 DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFA 535
Query: 305 GMEETAVVLAQKI 317
G A+ LA +
Sbjct: 536 GWRTEAMELANSL 548
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 147/293 (50%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I CK +E A +V ++MK R F PDI +Y I++ ++ L +V ++
Sbjct: 140 YNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLL 199
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D P V++Y I+I A +EA++L EM A P + + +I G+ E +
Sbjct: 200 LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVE 259
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + +G +P+ +YN ++ A+ + ++ +++ EM G PN TY I++
Sbjct: 260 RAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 319
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + GR +EA SV K M K T P +Y+ ++ C ++D+A+ I D M + G
Sbjct: 320 SSLCRFGRIDEAISVLKVMIEKELT-PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LP + Y+T++ +LC + A + F ++ +G P ++ + AL G
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCG 431
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 2/313 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+LI +++E+A V + ++ +PD+ +Y ++ G+ + + + +V MK
Sbjct: 108 KLIKGFFNFKNIEKASRVMEILESHT-EPDVFAYNAVISGFCKVNRIEAATQVLNRMKAR 166
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
GF PD+V+Y IMI + C+ ++ A+++ ++ NC P+ + LI E ++EA
Sbjct: 167 GFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 226
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
++ + RG P+ TYNA++ C + A ++ + G P+ +Y+I+L
Sbjct: 227 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRA 286
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+ G+ +E + M + G EP TY I++ C ++D A+ + M + + P
Sbjct: 287 FLNQGKWDEGEKLVAEMFSR-GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP 345
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ Y LI++LC E +LD A M+ G P ++ + AL G A+ +
Sbjct: 346 DTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 405
Query: 315 QKIDKLRKTPLVD 327
K+ + P V
Sbjct: 406 NKLRGMGCPPNVS 418
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 149/326 (45%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N +I +LC R + A +V D++ P + +YTIL+E +
Sbjct: 163 MKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGG 222
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G PD+ +Y +I C + A EL + + CKP +
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ ++ + E + + RG EP TY+ ++ + C RI++A ++ M +
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T +YD ++ L K GR + A + M G P + Y ++ C N + A
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISN-GCLPDIVNYNTILAALCKNGNANQA 401
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I+++++ G P + Y+T+I++L A M+ G+ P +++L
Sbjct: 402 LEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISC 461
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L +G+ E A+ L +++ P V
Sbjct: 462 LCRDGLVEEAIGLLDDMEQSGFRPTV 487
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 2/297 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+L++ CK+ + + + + + PD+ T L++G+ KN+ + V E+ +
Sbjct: 73 KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILES 131
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
EPDV +Y +I+ C R + A ++ M+A P + +I L + ++L A
Sbjct: 132 HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 191
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L+ Q P TY ++ A IN+A ++++EM G+ P+ TY+ ++
Sbjct: 192 LKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 251
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+ K G E A + ++ K G +P V +Y I++R F + D ++ EM +RG P
Sbjct: 252 MCKEGMVERAAELITSLTSK-GCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 310
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
YS LI+SLC ++D+A + M++ + P + L AL EG + A+
Sbjct: 311 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 155/305 (50%), Gaps = 2/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++KFG + ++ +N LI+ CK ++ A V D+M+ + F PD +Y I++ +
Sbjct: 150 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +V ++ D +P V++Y I+I A DEA++L EM + KP + T
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G+ E + A + + +G EP+ +YN ++ A + + ++M +M
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY I++ L + G+ EEA ++ K M K G P +Y+ ++ FC ++D+A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M + G LP + Y+T++ +LC K D A + F ++ ++G P ++ + A
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 301 LRDEG 305
L G
Sbjct: 448 LWSSG 452
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 155/310 (50%), Gaps = 2/310 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+LI R++ +A V + ++K PD+ +Y L+ G+ + + V M+
Sbjct: 129 KLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK 187
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
F PD V+Y IMI + CS + D A+++ ++ + NC+P+ + LI E + EA
Sbjct: 188 DFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEA 247
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L+ + RG +P+ TYN ++ C ++ A+ M+ + G P+ +Y+I+L
Sbjct: 248 LKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRA 307
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L+ G+ EE + +M + +P V TY I++ C + +++ AM + MK +G+ P
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ Y LI + C E +LD A ++ + M+ G P ++ + L G + A+ +
Sbjct: 367 DAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIF 426
Query: 315 QKIDKLRKTP 324
K+ ++ +P
Sbjct: 427 GKLGEVGCSP 436
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 3/317 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK ++ +N +I +CK V+RA E+ ++ + +PD+ SY ILL Q
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M + +P+VV+Y I+I C + +EA+ L + M+ P + + LI
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E RL A++F G P+ YN V+ C + + + A + ++ + G PN
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 185 TRTYDIVLHHLIKAG-RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ +Y+ + L +G + + + + MS G +P TY ++ C VD A +
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSN--GIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+M++ P + Y+ ++ C +++DA + M+ G RP ++ L + +
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555
Query: 304 EGMEETAVVLAQKIDKL 320
G A+ LA + ++
Sbjct: 556 AGYRAEAMELANDLVRI 572
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 116/228 (50%), Gaps = 4/228 (1%)
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCT-LINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C + Y E++ L M P I CT LI G + + + +A++ +K G +P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDV-ILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPD 157
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
YNA++ +C RI+DA R++D MR P+T TY+I++ L G+ + A V
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
++ +PTV TY I++ VD A+++ DEM +RG+ P M Y+T+I +C E
Sbjct: 218 QL-LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+D A + + + G P ++ L +AL ++G E L K+
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L FN L+D CK+ + RA EV ++M + PD+ +YTIL+ G + + +
Sbjct: 236 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLL 295
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA---------TNCKPSPHIFC 119
E+ G+ PDV++Y +++ C + +EA +L +EM A N P +
Sbjct: 296 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYN 355
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
++ GL + +S+A+ RG+ P+ TYN ++ C + R+ +A + DEM
Sbjct: 356 IVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASL 415
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN T V+ L + GR ++A+S+ MSRK P V Y ++ C + ++D
Sbjct: 416 GCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHA-PNVVVYTSLIDGLCKSDRMDD 474
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + D M+ +GV Y LI S+ H ++ +A + EM+ G P G L++
Sbjct: 475 ACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEE 534
Query: 300 A 300
A
Sbjct: 535 A 535
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 160/325 (49%), Gaps = 14/325 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKR--RFDPDIKSYTILLE-GWGQQKNLLSMNEVYR 69
+N +I LCKS ++E+A+E+ ++M +R + PDI +Y L+ G + ++ E+
Sbjct: 135 YNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILD 194
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
MK G PDV++Y +I+A C A R EA E+ + M +C P F TL++G
Sbjct: 195 GMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAG 251
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
L AL+ + + P+ TY +V C ++ A+ +++E+ + G P+ Y
Sbjct: 252 MLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYT 311
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKP--------GTEPTVSTYEIVVRMFCYNAQVDMAM 241
++ L K+G EEA+ + K MS + P + TY IV+ + + A+
Sbjct: 312 SLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAV 371
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ ++ ARG +P + Y+TLI+ LC +++ +AC EM +G P ++ L
Sbjct: 372 SLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGL 431
Query: 302 RDEGMEETAVVLAQKIDKLRKTPLV 326
G + A L ++ + R P V
Sbjct: 432 CRVGRVDDAWSLVVEMSRKRHAPNV 456
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 151/325 (46%), Gaps = 16/325 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L F LI CK+ RA E + + PD+ + L+ G + N
Sbjct: 57 GCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQA 116
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--FCTLI 122
+++ M+ PD+ +Y +I+ C + ++A EL EM K +P I + TLI
Sbjct: 117 VKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLI 176
Query: 123 N-GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
N G+ + + EAL+ K G P+ TYN+++ A C + R+ +A ++ M C
Sbjct: 177 NAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM-SC-- 233
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ T++ +L KAG A V + M R+ P V TY I+V C QV +A
Sbjct: 234 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE-NILPDVITYTILVNGLCRVGQVQVAF 292
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ---------EMLDIGIRPPGQ 292
+ +E+ +G +P + Y++L++ LC ++++A K + EM+ I + PP
Sbjct: 293 YLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLF 352
Query: 293 LFSNLKQALRDEGMEETAVVLAQKI 317
++ + L +G AV L +
Sbjct: 353 TYNIVLGGLIKDGSISKAVSLISDL 377
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 144/316 (45%), Gaps = 15/316 (4%)
Query: 9 ELPDFNRLIDT-LCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
++ +N LI+ +CK VE A E+ D MK PD+ +Y ++ ++ E+
Sbjct: 168 DIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEI 227
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ M PD+V++ +++ C A A+E+ EM N P + L+NGL
Sbjct: 228 LKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 284
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR---------K 178
++ A + ++G+ P+ Y ++V C S I +A++++ EM
Sbjct: 285 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVS 344
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ P TY+IVL LIK G +A S+ + + G P V TY ++ C +V
Sbjct: 345 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR-GYVPDVVTYNTLIDGLCKANRVR 403
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A + DEM + G P +++ LC ++DDA EM P ++++L
Sbjct: 404 EACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 463
Query: 299 QAL-RDEGMEETAVVL 313
L + + M++ VVL
Sbjct: 464 DGLCKSDRMDDACVVL 479
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 141/328 (42%), Gaps = 43/328 (13%)
Query: 22 KSRHVERAQEVFD-KMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDV 80
+S + A + FD ++ + D+ SY LL+ + + +VY+++ G P++
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
V++ I+I +C A + A+E R ++ + P +IF LI+GL + +A++ F
Sbjct: 63 VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMR----------------------------------- 165
+ P+ TYN V+ C S
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICK 182
Query: 166 ---INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
+ +A ++D M+ G P+ TY+ ++H L AGR EA + K MS P +
Sbjct: 183 DGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS----CSPDLV 238
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
T+ ++ FC + A+ + +EM +LP + Y+ L+N LC ++ A +E+
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298
Query: 283 LDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ G P +++L L G E A
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEA 326
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 147/301 (48%), Gaps = 4/301 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N+L+ L + ++A VF +M + PD ++ ILL G + L
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ MK+ G PD Y +I+ + AK + +A + EM +C P+ + +++G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +R +A++ + + +G P TYN +V C ++++A +M++EM G P+
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ + L K R +EA RM P T P V +Y V+ C + +D A R+
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVT-PDVVSYTTVINGLCKSGDLDSASRML 237
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D M RG P + YS+LI+ C +++ A ML +G RP +++L AL
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297
Query: 305 G 305
G
Sbjct: 298 G 298
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 157/332 (47%), Gaps = 17/332 (5%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+++ ++ PD +N I LCK V+ A++ +M PD+ SYT ++ G +
Sbjct: 170 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCK 226
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+L S + + M + G PDVV+Y +I+ C + A+ L M C+P+
Sbjct: 227 SGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 286
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +L+ L + +A + ++RGF P+ +YNA + C + R+ A + D M
Sbjct: 287 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 346
Query: 178 KCGIGPNTRTYD----------IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
+ G PN +Y ++L L K GR +EA ++F ++ + EP V Y ++
Sbjct: 347 ERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 406
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ C Q+D A++I +M + V+ ++ L++ LC +D+L DA M+D G
Sbjct: 407 LDSHCKRRQIDKALQIHKQMLEKNCCNVV-TWNILVHGLCVDDRLSDAETMLLTMVDEGF 465
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
P + L A+ G A+ L ++ K
Sbjct: 466 IPDFVTYGTLVDAMCKCGKSAAALELFEEAVK 497
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 141/333 (42%), Gaps = 46/333 (13%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD +N LI K++ +A + +M K P + +YT +++G + + +
Sbjct: 74 VPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVK 133
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN---------------C 111
+ EM+D G P++ +Y +++ C ++ DEA ++ EM C
Sbjct: 134 LLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLC 193
Query: 112 K-----------------PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
K P + T+INGL L A + RG P+ TY+
Sbjct: 194 KCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYS 253
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+++ +C + A ++D M K G PN Y+ +L L + G +A + M R+
Sbjct: 254 SLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR 313
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV----------MHMYSTLIN 264
G P V +Y + C +V A ++D M RG P + +Y+ L++
Sbjct: 314 -GFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLD 372
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
LC + D+AC F ++LD I P F N+
Sbjct: 373 GLCKGGRFDEACALFSKVLDEKICEPDVFFYNV 405
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDP----------DIKSYTI 50
M++ G ++ +N ID LCK+ V++A+ VFD+M +R P DI YT+
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
LL+G + ++ ++ D+ EPDV Y +M+++HC ++ D+A+++ ++M
Sbjct: 370 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEK 429
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
NC + + L++GL + RLS+A GF P+ TY +V A C + A
Sbjct: 430 NC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 488
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+ +E K G P+ TY ++ L+ EEAY +F ++ +
Sbjct: 489 LELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVER 533
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++D+ CK R +++A ++ +M ++ ++ ++ IL+ G L + M
Sbjct: 403 YNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMV 461
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D+GF PD V+YG +++A C + A+ELF E C P + LI GL E
Sbjct: 462 DEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAE 521
Query: 133 EALQFFGQSKKRGFEPEAPT 152
EA F + +R + P+ T
Sbjct: 522 EAYLLFTKLVERRWVPDDKT 541
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 149/290 (51%), Gaps = 2/290 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LCK+ +++A E+ D+M+ R P + + +++G + ++ +
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVA 92
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFCTLINGLGSEKRL 131
PD++++ I+++A + R +EA ++F M ++ C P+ + T+INGL + +L
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A++ + G P TY+ +V C + R + + ++ EM + G P+ Y+ +
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L+ L K+ R +EA + + M R G PTV TY ++ +FC + QVD A R+ M RG
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRS-GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + Y+T+I LC + +LDDA ++M+ P +S + L
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 160/344 (46%), Gaps = 24/344 (6%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
++ FN L+D L KS VE A ++F+ M + P++ +YT ++ G + L E+
Sbjct: 99 DIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIEL 158
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
M + G P+V++Y +++ C A R D+ L +EM +P ++ TL+NGL
Sbjct: 159 LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCK 218
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+RL EAL+ + G P TYN+++ +C S +++ A+R++ M + G P+
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD------MAM 241
Y+ V+ L + R ++A ++ K+M P V TY ++ C + +VD A
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCV-PDVITYSTIIDGLCKDWRVDADWKLEAAC 337
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS------ 295
I + MK G P Y+ +I LC K A + M+D + P FS
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397
Query: 296 ----NLKQALRDEGM------EETAVVLAQKIDKLRKTPLVDRG 329
+L A + GM + V A ID L K VD+
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 153/317 (48%), Gaps = 8/317 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + ++ L++ LCK+ ++ + +M +R F PD+ Y LL G + +
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+ + M G P VV+Y ++ C +K+ D A L + M C P + T
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM------MD 174
+I GL + RL +A Q P+ TY+ ++ C R++ +++ ++
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M++ G PN TY +V+ L +A ++++A ++ +RM P +S++ +V+ C +
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE-VVPDLSSFSMVIGSLCKS 400
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+D A +I+ M R P Y+ LI+ L ++D A + F+ M++ RP +
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATY 459
Query: 295 SNLKQALRDEGMEETAV 311
+++ L G E AV
Sbjct: 460 NSVLDGLCGVGRIEEAV 476
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 152/324 (46%), Gaps = 8/324 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ +N L++ LCKSR ++ A E+ M + P + +Y L+E + + K
Sbjct: 197 MTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQ 256
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + M + G PDV++Y +I C R D+A L ++M A C P + T
Sbjct: 257 VDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYST 316
Query: 121 LINGLGSEKR------LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+I+GL + R L A + K+ G P A TY V+ C + + A ++
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M + P+ ++ +V+ L K+ + AY +F MS + +P Y ++
Sbjct: 377 RMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE-CKPNPVAYAALIDGLSKG 435
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+VD A+R++ E+ P + Y+++++ LC ++++A + + M+ P G +
Sbjct: 436 GEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASY 494
Query: 295 SNLKQALRDEGMEETAVVLAQKID 318
L + L E A L Q ++
Sbjct: 495 GALIRGLCRVSCVEEAYELFQAVE 518
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
+N A ++ +AV+LFRE C P+ + +LI+GL +L +A + + + RG
Sbjct: 5 LNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P +N V+ C + R DA + P+ T++I++ L+K+GR EEA+
Sbjct: 62 PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+F+ M P V TY V+ C + ++D A+ + D M G P + YS L+ L
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
C + D QEM G +P +++ L L
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL 216
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 140/297 (47%), Gaps = 8/297 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG----WG 56
M + G ++ ++N +I LC+ ++ AQ + +M R PD+ +Y+ +++G W
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 57 QQKN--LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ L + E+ MK G P+ +Y ++I C A++ +A+ L R M + P
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
F +I L L A + FG +R +P Y A++ ++ A R+ +
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M + P TY+ VL L GR EEA + + M K P ++Y ++R C
Sbjct: 447 LMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE-CFPDGASYGALIRGLCRV 504
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
+ V+ A ++ ++A+G + +Y+ L+N LC + +L DA ++++ G + G
Sbjct: 505 SCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYKQQG 561
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 2/223 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P+ +YG +I+ C A + D+A EL EM P + +I GL R +AL +
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYDIVLHHLI 196
F P+ T+N +V A S R+ +A+++ + M PN TY V++ L
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K G+ + A + M+ + G P V TY ++V C + D + EM RG P +
Sbjct: 148 KDGKLDRAIELLDLMN-ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
MY+TL+N LC +LD+A + Q M+ G P +++L +
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 5/189 (2%)
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A+Q F + + P TY +++ C + +++ AY ++DEMR GI P ++ V
Sbjct: 15 GQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGV 71
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L KAGR +A FK ++ T P + T+ I+V + +V+ A +I++ M
Sbjct: 72 IKGLCKAGRFGDALGYFKTVAGTKCT-PDIITFNILVDALVKSGRVEEAFQIFESMHTSS 130
Query: 252 -VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
LP + Y+T+IN LC + KLD A + M + G P +S L + L G +
Sbjct: 131 QCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKG 190
Query: 311 VVLAQKIDK 319
L Q++ +
Sbjct: 191 FTLLQEMTR 199
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+++ + FN +I +C++ ++ A+ + +M + PD+ +Y L++G +
Sbjct: 142 MQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGR 201
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ +M G +P+ V + I+I+AHC + +EL REM +P +
Sbjct: 202 IEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNA 261
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + L A + + G P+ TY ++ YC ++ A + M G
Sbjct: 262 IVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 321
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+G + TY ++ L KAGR+ +A V M + G EP +TY +V+ FC V
Sbjct: 322 VGLDEVTYTALISGLSKAGRSADAERVLGEMM-EAGLEPDNTTYTMVIDAFCRKGDVKTG 380
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+R+ EM+ +G P + Y+ ++N C ++ +A M++IG+ P
Sbjct: 381 LRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSP 429
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 136/274 (49%), Gaps = 1/274 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ + LI LC+ +E A+ VF+KM R P+ +TIL++ ++ +
Sbjct: 177 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 236
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+M E++REM++ G PD V+Y ++N C A+ A + EM + +P + T
Sbjct: 237 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 296
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G E+ L A++ G + TY A++ + R DA R++ EM + G
Sbjct: 297 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 356
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +V+ + G + + K M K G +P V TY +++ FC Q+ A
Sbjct: 357 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK-GRKPGVVTYNVIMNGFCKLGQMKNA 415
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
+ + M GV P Y+ L++ C K+ D
Sbjct: 416 DMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD 449
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 36/263 (13%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P+ K + +L+ + L S V+ EM+ G VVS+ MI+ C A D A L
Sbjct: 114 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 173
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
R R+SEA G P+ TY A++ C
Sbjct: 174 HR-------------------------RMSEA----------GVTPDVYTYGALIQGLCR 198
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
RI DA + ++M G+ PN + I++ K G E + + M R+ G P
Sbjct: 199 VGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREM-RERGVRPDAV 257
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY +V C + A I EM++ G+ P Y+TLI+ C E++LD A + Q M
Sbjct: 258 TYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNM 317
Query: 283 LDIGIRPPGQLFSNLKQALRDEG 305
+ G+ ++ L L G
Sbjct: 318 VAEGVGLDEVTYTALISGLSKAG 340
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
EA + ++ P +F L+ L L+ A F + + RG ++N ++
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
C + ++ A + M + G+ P+ TY ++ L + GR E+A VF++M + G
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGR-GM 217
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P + I++ C + + + EM+ RGV P Y+ ++N LC L A
Sbjct: 218 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 277
Query: 278 YFQEMLDIGIRPPGQLFSNL 297
EM G+RP ++ L
Sbjct: 278 IVVEMRSAGLRPDTVTYTTL 297
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 51/102 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + + +ID C+ V+ + +M+ + P + +Y +++ G+ +
Sbjct: 352 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQ 411
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
+ + + + M + G PD ++Y I+++ HC + + EL
Sbjct: 412 MKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 453
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 146/296 (49%), Gaps = 5/296 (1%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
E+ FN L+D LCK VE A+ ++ KM+K P+ ++Y IL+ GW + +N ++
Sbjct: 131 EINAFNLLLDALCKCCLVEDAESLYKKMRKT-VKPNAETYNILVFGWCRVRNPTRGMKLL 189
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME---ATNCKPSPHIFCTLINGL 125
EM + G PD +Y I+ +C EAV+LF M +T P+ + +I L
Sbjct: 190 EEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVAL 249
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+ + + G G P+ TY ++ C +I++AY+ ++EM P+
Sbjct: 250 AQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDI 309
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ L L ++E+A ++ RM + P+V TY +++ MF D A W
Sbjct: 310 VTYNCFLKVLCDNKKSEDALKLYGRMI-ELNCIPSVQTYNMLISMFFEMDDPDGAFETWQ 368
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
E+ RG P Y +I L + +K++DAC +E+++ G++ P + F + L
Sbjct: 369 EIDNRGCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINEGVKLPYKKFDSFLMQL 424
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 113/243 (46%), Gaps = 5/243 (2%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
++ ++ ++++A C ++A L+++M T KP+ + L+ G + + ++
Sbjct: 131 EINAFNLLLDALCKCCLVEDAESLYKKMRKT-VKPNAETYNILVFGWCRVRNPTRGMKLL 189
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI---GPNTRTYDIVLHHL 195
+ + G P+ TYN + YC + I +A + + MR G P +TY I++ L
Sbjct: 190 EEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVAL 249
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ R E+ + + M G P V+TY+ ++ C ++D A + +EM + P
Sbjct: 250 AQHDRMEDCFKLIGHMI-SSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPD 308
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ Y+ + LC K +DA K + M+++ P Q ++ L + + A Q
Sbjct: 309 IVTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQ 368
Query: 316 KID 318
+ID
Sbjct: 369 EID 371
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L E + + ++ +P A TYN +V +C ++++EM + G P+ TY+
Sbjct: 147 LVEDAESLYKKMRKTVKPNAETYNILVFGWCRVRNPTRGMKLLEEMIELGHRPDNFTYNT 206
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGT--EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ K G EA +F+ M K T PT TY I++ + +++ ++ M
Sbjct: 207 AIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQHDRMEDCFKLIGHMI 266
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+ G LP + Y +I +C K+D+A K+ +EM + RP ++ + L D E
Sbjct: 267 SSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSE 326
Query: 309 TAVVLAQKIDKLRKTPLV 326
A+ L ++ +L P V
Sbjct: 327 DALKLYGRMIELNCIPSV 344
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRF---DPDIKSYTILLEGWGQ 57
M + G + + +N IDT CK+ + A ++F+ M+ + P K+Y I++ Q
Sbjct: 192 MIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALAQ 251
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ ++ M G PDV +Y +I C + DEA + EM + +P
Sbjct: 252 HDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIVT 311
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ + L K+ +AL+ +G+ + P TYN ++ + + A+ E+
Sbjct: 312 YNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEID 371
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+T TY +++ L + E+A
Sbjct: 372 NRGCRPDTDTYCVMIEGLFNCNKMEDA 398
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 154/293 (52%), Gaps = 15/293 (5%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+F L+ + DF L+ LC+ ++V A + K ++ D KS+ I+L GW N++
Sbjct: 225 RFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-FCNKDKYPFDAKSFNIVLNGWC---NVI 280
Query: 63 S----MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
V+ EM + G + DVVSY MI+ + ++ ++LF M+ +P ++
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 119 CTLINGLGSEKRLSEALQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+++ L +SEA +++G EP TYN+++ C + + +A ++ DEM
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G+ P RTY H ++ RT EE + + +M RK G EPTV TY +++R C
Sbjct: 401 EKGLFPTIRTY----HAFMRILRTGEEVFELLAKM-RKMGCEPTVETYIMLIRKLCRWRD 455
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D + +WDEMK + V P + Y +I+ L K+++A Y++EM D G+RP
Sbjct: 456 FDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 508
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 114/232 (49%), Gaps = 5/232 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ ++ +I K + + ++FD+MKK +PD K Y ++ +
Sbjct: 293 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 352
Query: 61 LLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + + M+++ G EP+VV+Y +I C A++ +EA ++F EM P+ +
Sbjct: 353 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 412
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+ L + + E + + +K G EP TY ++ C ++ + DEM++
Sbjct: 413 AFMRILRTGE---EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEK 469
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+GP+ +Y +++H L G+ EEAY +K M K G P + +++ F
Sbjct: 470 TVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK-GMRPNENVEDMIQSWF 520
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 123/268 (45%), Gaps = 11/268 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI---KSYTILLEGWGQQKNL 61
G + + +++ +I L K R + A + D+M R+F P + ++ I++ + ++
Sbjct: 156 GYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDV 213
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF---REMEATNCKPSPHIF 118
+ K E + + +++A C K +A L ++ + K +
Sbjct: 214 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVL 273
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
N +GS + EA + + + G + + +Y++++ Y +N ++ D M+K
Sbjct: 274 NGWCNVIGSPR---EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 330
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P+ + Y+ V+H L KA EA ++ K M + G EP V TY +++ C + +
Sbjct: 331 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 390
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSL 266
A +++DEM +G+ P + Y + L
Sbjct: 391 EAKQVFDEMLEKGLFPTIRTYHAFMRIL 418
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 164/369 (44%), Gaps = 52/369 (14%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS--------- 63
FN +I C V +A EVFD MKK F PD+ SY+IL++G +Q ++L+
Sbjct: 286 FNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMA 345
Query: 64 --------------------------MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD 97
E+++ +KD GF+ D + Y I+++ C +
Sbjct: 346 RNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLE 405
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+L+ +M N P + + +LI ++L EAL+ F G P T +V
Sbjct: 406 ICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILV 465
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+ I +A+ +D++R+ G+ P+ TY +++H L K + + + +F M ++ G
Sbjct: 466 HGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKR-GY 524
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P Y I++ F + A R++ +M G P + Y++LIN LCH+DKL +
Sbjct: 525 VPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMT 584
Query: 278 YFQEMLDIGIRPPGQLF----------SNLKQAL------RDEGMEETAVVLAQKIDKLR 321
F+ M+ G+ P L+ SN+K AL EG+ + V I
Sbjct: 585 LFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFS 644
Query: 322 KTPLVDRGQ 330
K +D Q
Sbjct: 645 KVLAMDGAQ 653
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 150/297 (50%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ L ++ L+ LC++ VE A E+F ++K + F D Y+I+L G Q +
Sbjct: 344 MARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLD 403
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ +M F PD +Y +I A+C ++ EA+E+F M + P+
Sbjct: 404 LEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTI 463
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G +E + EA F + ++ G P TY ++ C + ND + + +M K G
Sbjct: 464 LVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRG 523
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T Y I++ +KA +EA+ ++ +M + GT+P + TY ++ C++ ++
Sbjct: 524 YVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDE-GTKPNIFTYTSLINGLCHDDKLPEV 582
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
M ++ M G+ P +Y++LI C + A + F+EM G+ +++ L
Sbjct: 583 MTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCL 639
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 154/318 (48%), Gaps = 3/318 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW--GQQKNLLSMNE 66
EL N L+ L + + A+ +FD MK P++ SY++L+ + G + L E
Sbjct: 175 ELQVCNFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALE 234
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM+ +G P+ +Y + C AK+ A + + + + F +I+G
Sbjct: 235 LLSEMEVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFC 294
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ ++ +A++ F KK GF P+ +Y+ +V C + Y M+ EM + GI PN
Sbjct: 295 HDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLV 354
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y +LH L +AGR E A+ +FKR+ + G + Y IV+ C + +++ +W++
Sbjct: 355 SYSSLLHGLCRAGRVELAFELFKRL-KDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWND 413
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M +P + YS+LI + C +L +A + F+ M+ GI P + L +EG+
Sbjct: 414 MVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGL 473
Query: 307 EETAVVLAQKIDKLRKTP 324
A + K+ + P
Sbjct: 474 IGEAFLFLDKVRQFGVVP 491
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 1/217 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FG+ L + +I LCK +F M KR + PD Y+I+++G+ + +L
Sbjct: 486 QFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQ 545
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+Y +M D+G +P++ +Y +IN C + E + LF+ M P ++ +LI
Sbjct: 546 EAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLI 605
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ AL+ F + + G ++ Y ++G + + ++ A M+EM G+
Sbjct: 606 ACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLT 665
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
P TY ++ K G ++A +++ M + G P
Sbjct: 666 PTVVTYTDLIVGYFKIGDEKKAMAMYNSM-LQAGIAP 701
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 36/278 (12%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ------------- 58
+++ LI C+ R ++ A EVF+ M P++ + TIL+ G+ +
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484
Query: 59 ----------------KNLLSMNE------VYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
L +N+ ++ +M G+ PD V Y I+I+ A
Sbjct: 485 RQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDL 544
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
EA L+ +M KP+ + +LINGL + +L E + F G P+ Y ++
Sbjct: 545 QEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSL 604
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ YC + A + EM G+ ++ Y ++ K + A + M K G
Sbjct: 605 IACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNK-G 663
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
PTV TY ++ + AM +++ M G+ P
Sbjct: 664 LTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAP 701
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 9/183 (4%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ +ID K+ ++ A ++ KM P+I +YT L+ G L +
Sbjct: 525 VPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMT 584
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++ M +G PD + Y +I +C A+E+FREME ++ LI G
Sbjct: 585 LFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFS 644
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND---AYRMMDEMRKCGIGP 183
+ A F + +G P TY ++ Y +I D A M + M + GI P
Sbjct: 645 KVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGY---FKIGDEKKAMAMYNSMLQAGIAP 701
Query: 184 NTR 186
+ +
Sbjct: 702 DAK 704
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI CK +++ A E+F +M+ D YT L+ G+ + +
Sbjct: 593 GLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGA 652
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM + G P VV+Y +I + +A+ ++ M P + C L G
Sbjct: 653 QLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAKLSCIL--G 710
Query: 125 LGSE 128
LG++
Sbjct: 711 LGND 714
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 153/311 (49%), Gaps = 2/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + +N L+ LCK+ + M R P++ ++ +LL+ + ++
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L NE+Y+EM G P++++Y +++ +C R EA + M C P F +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ + ++ F KRG A TY+ +V +C S +I A + EM G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G+ E+A +F+ + +K + + Y ++ C +V+ A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I+ LC + L +A ++M + G P ++ L +A
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 301 -LRDEGMEETA 310
LRD + +A
Sbjct: 553 HLRDGDLTASA 563
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 151/287 (52%), Gaps = 5/287 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ +N +++ +C+S A ++ KM++R D+ +Y+ +++ + + +
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G + VV+Y ++ C A ++++ L ++M + P+ F L++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + RG P TYN ++ YC R+++A M+D M + P+
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++ R ++ VF+ +S++ G TY I+V+ FC + ++ +A ++
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM----LDIGI 287
EM + GVLP + Y L++ LC KL+ A + F+++ +D+GI
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 154/350 (44%), Gaps = 36/350 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + N +I+ C+ A V K+ K ++PD ++ L+ G + +
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKA 177
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M ++G +PD+V+Y ++N C + A ++ R+ME N K + T+I+
Sbjct: 178 VVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDS 237
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + A+ F + + +G + TYN++V C + + ND ++ +M I PN
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI------------------ 226
T++++L +K G+ +EA ++K M + G P + TY
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 227 -----------------VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+++ +C +VD M+++ + RG++ YS L+ C
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
K+ A + FQEM+ G+ P + L L D G E A+ + + + K
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 129/261 (49%), Gaps = 1/261 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A +F +M + R P + ++ + K + + ++++ +G ++ + IMIN
Sbjct: 72 AIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C + A + ++ +P F TLINGL E ++S+A+ + + G +P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQP 191
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ TYN++V C S + A+ M+ +M + + + TY ++ L + G + A S+F
Sbjct: 192 DMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
K M K G + +V TY +VR C + + + +M +R ++P + ++ L++
Sbjct: 252 KEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 269 EDKLDDACKYFQEMLDIGIRP 289
E KL +A + ++EM+ GI P
Sbjct: 311 EGKLQEANELYKEMITRGISP 331
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ F LI C + V+ +VF + KR + +Y+IL++G+ Q + E++
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+EM G PDV++YGI+++ C + ++A+E+F +++ + ++ T+I G+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ +A F +G +P TY ++ C +++A ++ +M + G PN TY
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ ++ ++ G + + + M + G S+ ++V+ M
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEM-KSCGFSADASSIKMVIDML 588
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+ D+A+ LF+EM + P F + + K+ + L F Q + G T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ +C + AY ++ ++ K G P+T T++ +++ L G+ +A + RM
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G +P + TY +V C + +A + +M+ R V + YST+I+SLC + +D
Sbjct: 188 -GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A F+EM GI+ +++L + L G
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ L+ C+S ++ A+E+F +M PD+ +Y ILL+G
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ +++ + +V Y +I C + ++A LF + KP+ +
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + LSEA + ++ G P TYN ++ A+ + + ++++EM+ CG
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAY 205
+ + +V+ L+ +G ++++
Sbjct: 574 FSADASSIKMVIDMLL-SGELDKSF 597
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 158/320 (49%), Gaps = 2/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ +LI + +E+A +V + ++K PD+ +Y ++ G+ + +
Sbjct: 107 GYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHA 165
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V MK GFEPDVV+Y I+I C R D A+ + ++ NCKP+ + LI
Sbjct: 166 SKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEA 225
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ + EA++ + RG P+ TYN VV C ++ A+ + + K G
Sbjct: 226 TITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAG 285
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I+L L+ G+ E + M K G EP TY ++ C + ++D A +
Sbjct: 286 VSTYNILLRDLLNEGKWEYGEKLMSDMLVK-GCEPNPITYSTLITALCRDGKIDEAKNVL 344
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
MK + + P + Y LI++LC E K+D A ++ +M+ G P ++++ +L
Sbjct: 345 KVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKN 404
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G + A+ + +K+ ++ P
Sbjct: 405 GNADEALNIFEKLGEVGCPP 424
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 137/313 (43%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + ++ +N LI C ++ A V D++ K P + +YTIL+E Q
Sbjct: 172 MKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGG 231
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G PD +Y +++N C D A E + C +
Sbjct: 232 IDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNI 291
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L +E + + +G EP TY+ ++ A C +I++A ++ M++
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKA 351
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +YD ++ L + G+ + A M G P + +Y ++ C N D A
Sbjct: 352 LAPDGYSYDPLISALCREGKVDLAIEFLDDMI-SGGHLPDILSYNSILASLCKNGNADEA 410
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I++++ G P Y+TL +L A EML GI P +++L
Sbjct: 411 LNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISC 470
Query: 301 LRDEGMEETAVVL 313
L +G+ + A+ L
Sbjct: 471 LCRDGLVDQAIEL 483
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 118/220 (53%), Gaps = 4/220 (1%)
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCT-LINGLGSEKRLSEALQFFGQSKKRG 145
+N C + +YDE++ + M KP I CT LI G + K++ +A+Q +K G
Sbjct: 84 LNRSCKSAKYDESLYFLQHMVNRGYKPDV-ILCTKLIKGFFNMKKIEKAIQVMEILEKHG 142
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P+ YNAV+ +C + R++ A +++D M+K G P+ TY+I++ + GR + A
Sbjct: 143 -KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLAL 201
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
V ++ K +PTV TY I++ +D AM++ DEM +RG+ P + Y+ ++N
Sbjct: 202 RVMDQL-LKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+C E LD A ++ + G ++ L + L +EG
Sbjct: 261 MCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEG 300
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 114/266 (42%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G + +N L+ L E +++ M + +P+ +Y+ L+ +
Sbjct: 277 ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGK 336
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V + MK+ PD SY +I+A C + D A+E +M + P + +
Sbjct: 337 IDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNS 396
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ L EAL F + + G P A +YN + GA S A M+ EM G
Sbjct: 397 ILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNG 456
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ ++ L + G ++A + M +PTV +Y V+ C ++ A
Sbjct: 457 IDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDA 516
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSL 266
+ + M G LP Y+ LI +
Sbjct: 517 IEVLAAMVNEGCLPNETTYTLLIQGI 542
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI LC+ ++ A+ V MK++ PD SY L+ ++ + E +M
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD++SY ++ + C DEA+ +F ++ C P+ + TL L S
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKI 443
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWS----------------------------- 163
AL + G +P+ TYN+++ C
Sbjct: 444 RALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTV 503
Query: 164 -------MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
RI DA ++ M G PN TY +++ + AG
Sbjct: 504 LLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAG 546
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 41/157 (26%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-WGQQKNLLSMN 65
LPD +N ++ +LCK+ + + A +F+K+ + P+ SY L W + ++
Sbjct: 388 LPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALG 447
Query: 66 EVYREMKDDGFEPD------------------------------------VVSYGIMINA 89
+ EM +G +PD V+SY ++
Sbjct: 448 MIL-EMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLG 506
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
C +R +A+E+ M C P+ + LI G+G
Sbjct: 507 LCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIG 543
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 154/293 (52%), Gaps = 15/293 (5%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+F L+ + DF L+ LC+ ++V A + K ++ D KS+ I+L GW N++
Sbjct: 185 RFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-FCNKDKYPFDAKSFNIVLNGWC---NVI 240
Query: 63 S----MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
V+ EM + G + DVVSY MI+ + ++ ++LF M+ +P ++
Sbjct: 241 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 300
Query: 119 CTLINGLGSEKRLSEALQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+++ L +SEA +++G EP TYN+++ C + + +A ++ DEM
Sbjct: 301 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 360
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G+ P RTY H ++ RT EE + + +M RK G EPTV TY +++R C
Sbjct: 361 EKGLFPTIRTY----HAFMRILRTGEEVFELLAKM-RKMGCEPTVETYIMLIRKLCRWRD 415
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D + +WDEMK + V P + Y +I+ L K+++A Y++EM D G+RP
Sbjct: 416 FDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRP 468
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 114/232 (49%), Gaps = 5/232 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ ++ +I K + + ++FD+MKK +PD K Y ++ +
Sbjct: 253 MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASF 312
Query: 61 LLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + + M+++ G EP+VV+Y +I C A++ +EA ++F EM P+ +
Sbjct: 313 VSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYH 372
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+ L + + E + + +K G EP TY ++ C ++ + DEM++
Sbjct: 373 AFMRILRTGE---EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEK 429
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+GP+ +Y +++H L G+ EEAY +K M K G P + +++ F
Sbjct: 430 TVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDK-GMRPNENVEDMIQSWF 480
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 123/268 (45%), Gaps = 11/268 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI---KSYTILLEGWGQQKNL 61
G + + +++ +I L K R + A + D+M R+F P + ++ I++ + ++
Sbjct: 116 GYVRSVREYHSMISILGKMRKFDTAWTLIDEM--RKFSPSLVNSQTLLIMIRKYCAVHDV 173
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF---REMEATNCKPSPHIF 118
+ K E + + +++A C K +A L ++ + K +
Sbjct: 174 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVL 233
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
N +GS + EA + + + G + + +Y++++ Y +N ++ D M+K
Sbjct: 234 NGWCNVIGSPR---EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKK 290
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P+ + Y+ V+H L KA EA ++ K M + G EP V TY +++ C + +
Sbjct: 291 ECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTE 350
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSL 266
A +++DEM +G+ P + Y + L
Sbjct: 351 EAKQVFDEMLEKGLFPTIRTYHAFMRIL 378
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 156/316 (49%), Gaps = 2/316 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + +N L+ LCK+ + M R P++ ++ +LL+ + ++
Sbjct: 244 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 303
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L NE+Y+EM G P++++Y +++ +C R EA + M C P F +
Sbjct: 304 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 363
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ + ++ F KRG A TY+ +V +C S +I A + EM G
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G+ E+A +F+ + +K + + Y ++ C +V+ A
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDA 482
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+ +I+ LC + L +A ++M + G P ++ L +A
Sbjct: 483 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 542
Query: 301 -LRDEGMEETAVVLAQ 315
LRD + +A ++ +
Sbjct: 543 HLRDGDLTASAKLIEE 558
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 151/287 (52%), Gaps = 5/287 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ +N +++ +C+S A ++ KM++R D+ +Y+ +++ + + +
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G + VV+Y ++ C A ++++ L ++M + P+ F L++
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 297
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + + + RG P TYN ++ YC R+++A M+D M + P+
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 357
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++ R ++ VF+ +S++ G TY I+V+ FC + ++ +A ++
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEELF 416
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM----LDIGI 287
EM + GVLP + Y L++ LC KL+ A + F+++ +D+GI
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 463
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 36/350 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + N +I+ C+ A V K+ K ++PD ++ L++G + +
Sbjct: 108 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 167
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M ++G +PDVV+Y ++N C + A++L R+ME N K + T+I+
Sbjct: 168 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 227
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + A+ F + + +G + TYN++V C + + ND ++ +M I PN
Sbjct: 228 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 287
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI------------------ 226
T++++L +K G+ +EA ++K M + G P + TY
Sbjct: 288 VITFNVLLDVFVKEGKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNML 346
Query: 227 -----------------VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+++ +C +VD M+++ + RG++ YS L+ C
Sbjct: 347 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 406
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
K+ A + FQEM+ G+ P + L L D G E A+ + + + K
Sbjct: 407 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 456
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A +F +M + R P + ++ + K + + ++++ +G ++ + IMIN
Sbjct: 62 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 121
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C + A + ++ +P F TLI GL E ++SEA+ + + G +P
Sbjct: 122 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 181
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ TYN++V C S + A ++ +M + + + TY ++ L + G + A S+F
Sbjct: 182 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 241
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
K M K G + +V TY +VR C + + + +M +R ++P + ++ L++
Sbjct: 242 KEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 300
Query: 269 EDKLDDACKYFQEMLDIGIRP 289
E KL +A + ++EM+ GI P
Sbjct: 301 EGKLQEANELYKEMITRGISP 321
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 112/223 (50%), Gaps = 1/223 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ F LI C + V+ +VF + KR + +Y+IL++G+ Q + E++
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+EM G PDV++YGI+++ C + ++A+E+F +++ + ++ T+I G+
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ +A F +G +P TY ++ C +++A ++ +M + G PN TY
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 536
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ ++ ++ G + + + M + G S+ ++V+ M
Sbjct: 537 NTLIRAHLRDGDLTASAKLIEEM-KSCGFSADASSIKMVIDML 578
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+ D+A+ LF+EM + PS F + + K+ + L F Q + G T N
Sbjct: 58 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ +C + AY ++ ++ K G P+T T++ ++ L G+ EA + RM
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G +P V TY +V C + +A+ + +M+ R V + YST+I+SLC + +D
Sbjct: 178 -GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 236
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A F+EM GI+ +++L + L G
Sbjct: 237 AISLFKEMETKGIKSSVVTYNSLVRGLCKAG 267
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 96/198 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL ++ L+ C+S ++ A+E+F +M PD+ +Y ILL+G
Sbjct: 384 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 443
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ +++ + +V Y +I C + ++A LF + KP+ +
Sbjct: 444 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 503
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + LSEA + ++ G P TYN ++ A+ + + ++++EM+ CG
Sbjct: 504 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 563
Query: 181 IGPNTRTYDIVLHHLIKA 198
+ + +V+ L+ A
Sbjct: 564 FSADASSIKMVIDMLLSA 581
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L+D LC + +E+A E+F+ ++K + D I YT ++EG + +
Sbjct: 425 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 484
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ + G +P+V++Y +MI+ C EA L R+ME P+ + TLI
Sbjct: 485 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHL 544
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
+ L+ + + + K GF +A + V+ +M+
Sbjct: 545 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 151/302 (50%), Gaps = 1/302 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ F+ LI C +E A +F +M + +PD ++ IL++ ++ NL +
Sbjct: 242 DVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNML 301
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
M +G P+VV+Y +++ +C + ++A + + P+ H +CT+ING
Sbjct: 302 VVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKI 361
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
K + EAL F + +G P+ TYN+++ C S RI+ A+ ++DEM G N TY
Sbjct: 362 KMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTY 421
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ L K ++A ++ K++ + G +P + T+ I++ C ++ A ++ ++
Sbjct: 422 NCLIDALCKNHHVDQAIALVKKI-KDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLL 480
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
++G Y+ ++N LC E D+A +M D GI P + L QAL + E
Sbjct: 481 SKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENE 540
Query: 309 TA 310
A
Sbjct: 541 KA 542
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 144/291 (49%), Gaps = 10/291 (3%)
Query: 2 DKFGLKQEL------PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ FGL +E+ PD FN L+D LCK +++ A+ + M K P++ +Y+ L+
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLM 320
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+G+ + V + G P+ SY MIN C K DEA+ LF +M+
Sbjct: 321 DGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIA 380
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P + +LI+GL R+S A + + G TYN ++ A C + ++ A +
Sbjct: 381 PDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIAL 440
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ +++ GI P+ T++I+++ L K GR + A VF+ + K G TY I+V C
Sbjct: 441 VKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSK-GYSVNAWTYNIMVNGLC 499
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
D A + +M G++P Y TLI +L H+D+ + A K +EM+
Sbjct: 500 KEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 149/306 (48%), Gaps = 1/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID+LCK + V A E++ +M ++ PD+ +++ L+ G+ L ++REM
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMV 270
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PD ++ I+++A C A + M P+ + +L++G +++
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVN 330
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + G P A +Y ++ +C +++A + ++M+ GI P+ TY+ ++
Sbjct: 331 KAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLI 390
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+GR A+ + M G + TY ++ C N VD A+ + ++K +G+
Sbjct: 391 DGLCKSGRISYAWELVDEM-HDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P M+ ++ LI LC +L +A FQ++L G ++ + L EG+ + A
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEA 509
Query: 313 LAQKID 318
L K+D
Sbjct: 510 LLSKMD 515
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 139/307 (45%), Gaps = 1/307 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + + LI+ LCK A ++ K+ + ++ Y +++ + K ++
Sbjct: 167 LGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVID 226
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E+Y +M PDVV++ +I C + +EA LFREM N P + F L++
Sbjct: 227 AYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVD 286
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L E L A K G P TY++++ YC ++N A +++ + + G P
Sbjct: 287 ALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAP 346
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N +Y +++ K +EA S+F M K G P TY ++ C + ++ A +
Sbjct: 347 NAHSYCTMINGFCKIKMVDEALSLFNDMQFK-GIAPDKVTYNSLIDGLCKSGRISYAWEL 405
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
DEM G + Y+ LI++LC +D A +++ D GI+P F+ L L
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCK 465
Query: 304 EGMEETA 310
G + A
Sbjct: 466 VGRLKNA 472
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 145/304 (47%), Gaps = 7/304 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G+ ++ FN LI+ C + A + K+ K ++PD ++ L++G G+ K
Sbjct: 98 GITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEA 157
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L ++ + GF D SYG +IN C A+++ R+++ K + ++ T+
Sbjct: 158 LHFHDHVLAL---GFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTI 214
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ L K + +A + + Q + P+ T++A++ +C ++ +A+ + EM I
Sbjct: 215 IDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNI 274
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ T++I++ L K G + A ++ M K G P V TY ++ +C QV+ A
Sbjct: 275 NPDYYTFNILVDALCKEGNLKGAKNMLVVM-MKEGVMPNVVTYSSLMDGYCLVNQVNKAK 333
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ + + G P H Y T+IN C +D+A F +M GI P +++L L
Sbjct: 334 HVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGL 393
Query: 302 RDEG 305
G
Sbjct: 394 CKSG 397
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + ++ L+D C V +A+ V + + + P+ SY ++ G+ + K
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M+ G PD V+Y +I+ C + R A EL EM + +
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + +A+ + K +G +P+ T+N ++ C R+ +A + ++ G
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N TY+I+++ L K G +EA ++ +M G P TYE +++ + + + A
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDN-GIIPDAVTYETLIQALFHKDENEKA 542
Query: 241 MRIWDEMKARGVL 253
++ EM AR V+
Sbjct: 543 EKLLREMIARDVV 555
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 1/229 (0%)
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
R ++ G PD+ ++ I+IN +C + A + ++ +P F TLI GL
Sbjct: 92 RRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLN 151
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ EAL F GF + +Y ++ C A +M+ ++ + N Y
Sbjct: 152 GKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMY 211
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ L K +AY ++ +M K P V T+ ++ FC Q++ A ++ EM
Sbjct: 212 NTIIDSLCKHKLVIDAYELYSQMIAKK-ISPDVVTFSALIYGFCIVGQLEEAFGLFREMV 270
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ + P + ++ L+++LC E L A M+ G+ P +S+L
Sbjct: 271 LKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSL 319
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 94 KRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
Y A+ L R +E P F LIN ++ A + K G+EP+ T+
Sbjct: 82 NHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITF 141
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
N ++ C + ++ +A D + G + +Y +++ L K G T A + +++
Sbjct: 142 NTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDG 201
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
K + V Y ++ C + V A ++ +M A+ + P + +S LI C +L+
Sbjct: 202 KL-VKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLE 260
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+A F+EM+ I P F+ L AL EG
Sbjct: 261 EAFGLFREMVLKNINPDYYTFNILVDALCKEG 292
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 188 YDIVLHHLIKAGRTE--EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
++ +L L+K+ A S+ +R+ G P + T+ I++ +C+ A+++ A +
Sbjct: 69 FNKILGSLVKSNNNHYPTAISLSRRLEFH-GITPDIFTFNILINCYCHMAEMNFAFSMMA 127
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++ G P ++TLI LC K+ +A + +L +G + L L G
Sbjct: 128 KILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIG 187
Query: 306 MEETAVVLAQKID-KLRKTPLV 326
TA+ + +KID KL K +V
Sbjct: 188 ETRTALQMLRKIDGKLVKINVV 209
>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
Length = 561
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 151/323 (46%), Gaps = 2/323 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++FG K + N L+ LC+ HV A F+ MK + +Y I++ GW +
Sbjct: 227 LEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGG-IPFNCMTYNIIIGGWSKYGK 285
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M + M DGF P+ +++ +I A R D+AVE+F ME T C P+ ++
Sbjct: 286 IGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNA 345
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ S + E L+++ +P TY ++ A+ + ++ DA M+DEM G
Sbjct: 346 LISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRG 405
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P T + L + G A ++K+ +RK G ++S Y++++ + M
Sbjct: 406 MIPTTGAITSFIEPLCQYGPPHAAMMIYKK-ARKVGCRISLSAYKLLLMRLSRFGKCGML 464
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +WDEM+ G +Y +IN LC+ +LD A +E L G P + S L
Sbjct: 465 LNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEESLXKGFCPSRLIRSKLNNK 524
Query: 301 LRDEGMEETAVVLAQKIDKLRKT 323
L E A L KI R+
Sbjct: 525 LLASNKVEMAYKLFLKIKXARQN 547
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 128/285 (44%), Gaps = 2/285 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
+K+ D+ +Y ++++ G++K + V ++M G P+ + I++++ A++
Sbjct: 157 VKQPTIPKDVDTYNVIIKALGRRKFIEFXVXVLKDMHIQGISPNYETLSIVMDSFIKARQ 216
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+A+E+FR +E K L+ L + A FF + K G TYN
Sbjct: 217 VSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFF-NAMKGGIPFNCMTYNI 275
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++G + +I + R + M G PN T+ ++ L +AGR ++A VF M +
Sbjct: 276 IIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHM-EET 334
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P Y ++ F D ++ ++ M + P M Y+ LI + K+ DA
Sbjct: 335 GCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADA 394
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+ EM+ G+ P ++ + L G A+++ +K K+
Sbjct: 395 LEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKV 439
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 75/176 (42%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +LI K+R V A E+ D+M R P + T +E Q + +Y++ +
Sbjct: 378 YTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKAR 437
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + +Y +++ + + L+ EM+ + ++ +INGL + +L
Sbjct: 438 KVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLD 497
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
A+ +S +GF P + + S ++ AY++ +++ N R +
Sbjct: 498 TAVLVMEESLXKGFCPSRLIRSKLNNKLLASNKVEMAYKLFLKIKXARQNDNARRF 553
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 156/320 (48%), Gaps = 2/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQK 59
M + G K + LID LCK E+A +F K+ + + P++ +YT ++ G+ +++
Sbjct: 324 MVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEE 383
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L + MK+ G P+ +Y +I+ HC A + A EL M P+ +
Sbjct: 384 KLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYN 443
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+GL + R EA + + K G + TY ++ +C A + M K
Sbjct: 444 AIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKV 503
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P+ TY++++ + + EE+ +F+ + G PT TY ++ +C + +
Sbjct: 504 GLQPDMHTYNVLIATFCRQKKVEESEKLFEE-AVGLGLLPTKETYTSMICGYCRDGHISS 562
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A++ + +M+ G P Y LI+ LC+E KLD+AC+ ++ M+D G+ P L
Sbjct: 563 AIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAY 622
Query: 300 ALRDEGMEETAVVLAQKIDK 319
+G TA+++ ++++K
Sbjct: 623 EYCKQGDSATAMIILERLEK 642
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 161/388 (41%), Gaps = 72/388 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + N +ID V+ A++VFD+M R PD SY +++ G+ +
Sbjct: 184 MQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGR 243
Query: 61 LLSMNEVYREMKDDGF-----------------------------------EPDVVSYGI 85
+ ++ ++M + G+ P+++++
Sbjct: 244 ISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSS 303
Query: 86 MINAHCSAKRYDEAVELFREM------------------------------------EAT 109
+IN C +A E+ EM +
Sbjct: 304 LINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD 363
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
N KP+ + + +ING E++L+ A + K++G P TY ++ +C + A
Sbjct: 364 NYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRA 423
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
Y +MD M K G PN TY+ ++ L K GR EAY + +R K G TY I++
Sbjct: 424 YELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRR-GLKSGLHADKVTYTILIS 482
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
FC A+ I+ M G+ P MH Y+ LI + C + K++++ K F+E + +G+ P
Sbjct: 483 EFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLP 542
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ ++++ +G +A+ K+
Sbjct: 543 TKETYTSMICGYCRDGHISSAIKFFHKM 570
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 4/284 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK+ + RA E+ D M K F P+I +Y +++G ++
Sbjct: 395 MKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGR 454
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ R G D V+Y I+I+ C +A+ +F M +P H +
Sbjct: 455 FPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNV 514
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI +K++ E+ + F ++ G P TY +++ YC I+ A + +MR G
Sbjct: 515 LIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYG 574
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P++ TY ++ L + +EA +++ M G P T + +C A
Sbjct: 575 CKPDSITYGALISGLCNESKLDEACQLYETMIDN-GLSPCEVTRVTLAYEYCKQGDSATA 633
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
M I + ++ + + ++ TLI LC E K+ A +F ++LD
Sbjct: 634 MIILERLEKKLWIRTVN---TLIRKLCSEKKVGVAALFFHKLLD 674
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 103/229 (44%), Gaps = 2/229 (0%)
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM++ G +I+ + D A ++F EM P + ++ G
Sbjct: 183 EMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMG 242
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R+S+ ++ +RG+ + T ++ + +N A+ + + G+ PN +
Sbjct: 243 RISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFS 302
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-K 248
+++ L K G ++A+ + + M RK G +P V T+ ++ C + A R++ ++ +
Sbjct: 303 SLINGLCKIGSIKQAFEMLEEMVRK-GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVR 361
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ P ++ Y+ +IN C E+KL+ A M + G+ P ++ L
Sbjct: 362 SDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCL 410
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 1/188 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L EA+ + + G +A N V+ ++ A ++ DEM + P++ +Y
Sbjct: 173 KLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYK 232
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ + GR + K M + G +T +++ F V+ A + +
Sbjct: 233 LMVVGYCRMGRISDVDRWLKDMIER-GYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQ 291
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G+ P + +S+LIN LC + A + +EM+ G +P + L L +G E
Sbjct: 292 MGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEK 351
Query: 310 AVVLAQKI 317
A L K+
Sbjct: 352 AFRLFLKL 359
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 147/304 (48%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K +K E +N LI C ++ A D+M +R + +Y +L+
Sbjct: 248 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 307
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM G DV +Y I+IN HC +A+E+F M + + + +
Sbjct: 308 GTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 367
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + ++ E + F ++ +RG P+ YNA++ ++ S I+ A+ +M EM K
Sbjct: 368 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR 427
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ ++ L GR +EA + M+++ G +P + TY ++ + V A
Sbjct: 428 IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR-GIQPDLVTYNTLISGYSMKGDVKDA 486
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+RI +EM +G P + Y+ LI LC + DDA +EM++ GI P + +L +
Sbjct: 487 LRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEG 546
Query: 301 LRDE 304
L E
Sbjct: 547 LTTE 550
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 128/272 (47%), Gaps = 3/272 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+ L A E+ ++M + D+ +Y IL+ G ++ N+
Sbjct: 287 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKA 346
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G VV+Y +I A + E +LF E +P ++ LIN
Sbjct: 347 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINS 406
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + A + G+ +K+ P+ TYN ++ C R+++A +++DEM K GI P+
Sbjct: 407 HSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPD 466
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ G ++A + M K G PT+ TY +++ C N Q D A +
Sbjct: 467 LVTYNTLISGYSMKGDVKDALRIRNEMMNK-GFNPTLLTYNALIQGLCKNGQGDDAENMV 525
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK--LDD 274
EM G+ P Y +LI L ED+ +DD
Sbjct: 526 KEMVENGITPDDSTYISLIEGLTTEDERAIDD 557
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 9/222 (4%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y MK S +++A SA + ++FR + C + F ++ L
Sbjct: 110 LYSRMKSLSLPISTASLHPLLSALPSAPAFALFADMFR-LRLPLCTTT---FNIMLRHLC 165
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGIGPNT 185
S + + AL+ Q + P A TYN V+ +C R+ A +M EMR + GI PN
Sbjct: 166 SAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 221
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY V+ K GR +EA VF M K +P Y ++ +C ++D A+ D
Sbjct: 222 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 281
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
M RGV + Y+ L+++L + + +A + +EM G+
Sbjct: 282 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGL 323
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 148/304 (48%), Gaps = 4/304 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK---RRFDPDIKSYTILLEGWGQ 57
M + G + + L+ LC + E A E+ M RR P++ SY+I++ G+
Sbjct: 152 MPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFT 211
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + ++ EM D G PDVV+Y +I+ C A+ +D A +F++M KP+ +
Sbjct: 212 EGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYT 271
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+G S + E +Q + RG +P+ TY +++ C + R +A D M
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ GI P TY I++H G E +S M G P + I + +
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVEN-GLSPDHHIFNIFFSAYAKCGMI 390
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D AM I+++M+ G+ P + Y LI++LC ++DDA F +M++ G+ P +F++L
Sbjct: 391 DKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSL 450
Query: 298 KQAL 301
L
Sbjct: 451 VYGL 454
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 160/323 (49%), Gaps = 8/323 (2%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
++ +I+ V++ +F +M R PD+ +YT +++G + + V+++M
Sbjct: 201 SYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQM 260
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
D+GF+P+ +Y +I+ + S ++ E V++ EM A KP + + +L+N L R
Sbjct: 261 IDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRC 320
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA FF ++G +P+ TY ++ Y +++ + +D M + G+ P+ ++I
Sbjct: 321 REARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIF 380
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
K G ++A +F +M R+ G P V Y ++ C +VD A +++M G
Sbjct: 381 FSAYAKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG--MEET 309
V P + ++++L+ LC DK + A + EMLD GI P F+ L L + G ME
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGR 499
Query: 310 AVV-----LAQKIDKLRKTPLVD 327
++ + + D TPL+
Sbjct: 500 RLIDLMEHVGVRPDAFSYTPLIS 522
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 150/313 (47%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + FN K +++A ++F+KM++ P++ +Y L++ + +
Sbjct: 369 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M ++G P++V + ++ C+ +++ A EL EM P+ F TLI
Sbjct: 429 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 488
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R+ E + + G P+A +Y ++ YC + R ++A ++ D M G+ P
Sbjct: 489 LCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPT 548
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +LH A R ++AY +F+ M RK G P V TY ++ + A ++
Sbjct: 549 EVTYNTLLHGYCSASRIDDAYCLFREMLRK-GVTPGVVTYNTILHGLFQTKRFSEAKELY 607
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M G ++ Y+ ++N LC + +D+A K FQ + G++ F+ + AL
Sbjct: 608 LNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKG 667
Query: 305 GMEETAVVLAQKI 317
G +E A+ L I
Sbjct: 668 GRKEDAMDLFAAI 680
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 147/324 (45%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + ++ LID LCK V+ A+ F++M P+I + L+ G
Sbjct: 400 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 459
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM D G P+ V + +I C+ R E L ME +P +
Sbjct: 460 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 519
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G R EA + F G P TYN ++ YC + RI+DAY + EM + G
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 579
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ +LH L + R EA ++ M GT+ + TY I++ C + VD A
Sbjct: 580 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS-GTKCDIYTYNIILNGLCKSNCVDEA 638
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ + ++G+ + ++ +I +L + +DA F + G+ P + + +
Sbjct: 639 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAEN 698
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +EG E L ++K P
Sbjct: 699 LIEEGSLEEFDSLFSAMEKNGTAP 722
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 139/301 (46%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + + L++ LCK+ A+ FD M ++ P + +Y IL+ G+ +
Sbjct: 295 MSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGA 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L M+ M ++G PD + I +A+ D+A+++F +M P+ +
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ +A F Q G P +N++V C + A ++ EM G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN ++ ++ +L GR E + M G P +Y ++ +C + D A
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEH-VGVRPDAFSYTPLISGYCLTGRTDEA 533
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++D M + G+ P Y+TL++ C ++DDA F+EML G+ P ++ +
Sbjct: 534 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 593
Query: 301 L 301
L
Sbjct: 594 L 594
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 139/288 (48%), Gaps = 7/288 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G+ ++ + +ID LCK++ +RA+ VF +M F P+ +Y L+ G+ G+ K +
Sbjct: 229 GIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEV 288
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ M E EM G +PD +YG ++N C R EA F M KP + L
Sbjct: 289 VQMLE---EMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGIL 345
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+G ++ LSE F + G P+ +N AY I+ A + ++MR+ G+
Sbjct: 346 IHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGL 405
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN Y ++ L K GR ++A F +M + G P + + +V C + + A
Sbjct: 406 SPNVVNYGALIDALCKLGRVDDAEVKFNQMINE-GVTPNIVVFNSLVYGLCTVDKWERAE 464
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ EM +G+ P ++TLI +LC+ ++ + + M +G+RP
Sbjct: 465 ELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRP 512
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC V + + D M+ PD SYT L+ G+ +V+ M
Sbjct: 482 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMV 541
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P V+Y +++ +CSA R D+A LFREM P + T+++GL KR S
Sbjct: 542 SIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFS 601
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + G + + TYN ++ C S +++A++M + G+ N T+ I++
Sbjct: 602 EAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 661
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR E+A +F + G P V TY +V ++ ++ M+ G
Sbjct: 662 GALLKGGRKEDAMDLFAAIPAN-GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGT 720
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P M + L+ L H + A Y ++
Sbjct: 721 APNSQMLNALVRRLLHRGDISRAGAYLSKL 750
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 147/321 (45%), Gaps = 5/321 (1%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL-SMNEVY 68
L ++ LI C+ H+E F + K + D + LL+G K + +M+ +
Sbjct: 90 LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM---EATNCKPSPHIFCTLINGL 125
+ M + G PD VSY I++ C+ KR +EA+EL M C P+ + +ING
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+E ++ + F + RG P+ TY V+ C + + A + +M G PN
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNN 269
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ ++H + G+ +E + + MS + G +P TY ++ C N + A +D
Sbjct: 270 YTYNCLIHGYLSIGKWKEVVQMLEEMSAR-GLKPDCYTYGSLLNYLCKNGRCREARFFFD 328
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M +G+ P + Y LI+ + L + + M++ G+ P +F+ A G
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 388
Query: 306 MEETAVVLAQKIDKLRKTPLV 326
M + A+ + K+ + +P V
Sbjct: 389 MIDKAMDIFNKMRQHGLSPNV 409
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 1/250 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + + LI C + + A++VFD M P +Y LL G+
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++REM G P VV+Y +++ KR+ EA EL+ M + K + +
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + EA + F +G + T+ ++GA R DA + + G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY +V +LI+ G EE S+F M K GT P +VR + + A
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAM-EKNGTAPNSQMLNALVRRLLHRGDISRA 743
Query: 241 MRIWDEMKAR 250
++ R
Sbjct: 744 GAYLSKLDER 753
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 139/342 (40%), Gaps = 50/342 (14%)
Query: 12 DFNRLIDTLCKSRHV--ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK-------NLL 62
+ R+I +SR + + A ++FD++ ++++ LL + + +
Sbjct: 14 ELERIIAERARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVS 73
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMIN---------------------------------- 88
N + RE D P++ +Y I+I
Sbjct: 74 HFNRMVRECSDK-VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLL 132
Query: 89 -AHCSAKRYDEAVE-LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF---GQSKK 143
C KR EA++ L + M C P + L+ GL +EKR EAL+
Sbjct: 133 KGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHG 192
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
R P +Y+ V+ + +++ Y + EM GI P+ TY V+ L KA +
Sbjct: 193 RRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDR 252
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A VF++M G +P TY ++ + + +++ +EM ARG+ P + Y +L+
Sbjct: 253 AEGVFQQMIDN-GFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLL 311
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
N LC + +A +F M+ GI+P + L +G
Sbjct: 312 NYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKG 353
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 93/244 (38%), Gaps = 30/244 (12%)
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA----LQFFGQSKKRGFEPEAP- 151
D+A++LF E+ S F L+ + S R S A + F + + + AP
Sbjct: 31 DDALKLFDELLHHARPASVRAFNHLLTAV-SRARCSSASELAVSHFNRMVRECSDKVAPN 89
Query: 152 --TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
TY+ ++G +C + + + K G + + +L L R EA V
Sbjct: 90 LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK---ARGVLPVMHMYSTLINSL 266
+ + G P +Y I+++ C + + A+ + M R P + YS +IN
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
E ++D F EM+D GI P V ID L K L
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPD-------------------VVTYTTVIDGLCKAQLF 250
Query: 327 DRGQ 330
DR +
Sbjct: 251 DRAE 254
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 148/290 (51%), Gaps = 2/290 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LCK+ +++A E+ D+M+ R P + + ++ G + ++ +
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVA 92
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFCTLINGLGSEKRL 131
PD++++ I+++A + R +EA ++F M ++ C P+ + T+INGL + +L
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A++ + G P TY+ +V C + R + + ++ EM + G P+ Y+ +
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTL 212
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L+ L K+ R +EA + + M R G PTV TY ++ +FC + QVD A R+ M RG
Sbjct: 213 LNGLCKSRRLDEALELVQLMIRS-GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + Y+T+I LC + +LDDA ++M+ P +S + L
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGL 321
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 160/344 (46%), Gaps = 24/344 (6%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
++ FN L+D L KS VE A ++F+ M + P++ +YT ++ G + L E+
Sbjct: 99 DIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIEL 158
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
M + G P+V++Y +++ C A R D+ L +EM +P ++ TL+NGL
Sbjct: 159 LDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCK 218
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+RL EAL+ + G P TYN+++ +C S +++ A+R++ M + G P+
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD------MAM 241
Y+ V+ L + R ++A ++ K+M P V TY ++ C + +VD A
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCV-PDVITYSTIIDGLCKDWRVDADWKLEAAC 337
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS------ 295
I + MK G P Y+ +I LC K A + M+D + P FS
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397
Query: 296 ----NLKQALRDEGM------EETAVVLAQKIDKLRKTPLVDRG 329
+L A + GM + V A ID L K VD+
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKA 441
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 153/317 (48%), Gaps = 8/317 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + ++ L++ LCK+ ++ + +M +R F PD+ Y LL G + +
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+ + M G P VV+Y ++ C +K+ D A L + M C P + T
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM------MD 174
+I GL + RL +A Q P+ TY+ ++ C R++ +++ ++
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M++ G PN TY +V+ L +A ++++A ++ +RM P +S++ +V+ C +
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE-VVPDLSSFSMVIGSLCKS 400
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+D A +I+ M R P Y+ LI+ L ++D A + F+ M++ RP +
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATY 459
Query: 295 SNLKQALRDEGMEETAV 311
+++ L G E AV
Sbjct: 460 NSVLDGLCGVGRIEEAV 476
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 152/324 (46%), Gaps = 8/324 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ +N L++ LCKSR ++ A E+ M + P + +Y L+E + + K
Sbjct: 197 MTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQ 256
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + M + G PDV++Y +I C R D+A L ++M A C P + T
Sbjct: 257 VDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYST 316
Query: 121 LINGLGSEKR------LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+I+GL + R L A + K+ G P A TY V+ C + + A ++
Sbjct: 317 IIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLR 376
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M + P+ ++ +V+ L K+ + AY +F MS + +P Y ++
Sbjct: 377 RMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE-CKPNPVAYAALIDGLSKG 435
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+VD A+R++ E+ P + Y+++++ LC ++++A + + M+ P G +
Sbjct: 436 GEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASY 494
Query: 295 SNLKQALRDEGMEETAVVLAQKID 318
L + L E A L Q ++
Sbjct: 495 GALIRGLCRVSCVEEAYELFQAVE 518
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 140/297 (47%), Gaps = 8/297 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG----WG 56
M + G ++ ++N +I LC+ ++ AQ + +M R PD+ +Y+ +++G W
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 57 QQKN--LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ L + E+ MK G P+ +Y ++I C A++ +A+ L R M + P
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
F +I L L A + FG +R +P Y A++ ++ A R+ +
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE 446
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M + P TY+ VL L GR EEA + + M K P ++Y ++R C
Sbjct: 447 LMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE-CFPDGASYGALIRGLCRV 504
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
+ V+ A ++ ++A+G + +Y+ L+N LC + +L DA ++++ G + G
Sbjct: 505 SCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYKQQG 561
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
+N A ++ +AV+LFRE C P+ + +LI+GL +L +A + + + RG
Sbjct: 5 LNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGI 61
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P +N V+ C + R DA + P+ T++I++ L+K+GR EEA+
Sbjct: 62 PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+F+ M P V TY V+ C + ++D A+ + D M G P + YS L+ L
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
C + D QEM G +P +++ L L
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGL 216
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 2/223 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P+ +YG +I+ C A + D+A EL EM P + +I GL R +AL +
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYDIVLHHLI 196
F P+ T+N +V A S R+ +A+++ + M PN TY V++ L
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K G+ + A + M+ + G P V TY ++V C + D + EM RG P +
Sbjct: 148 KDGKLDRAIELLDLMN-ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
MY+TL+N LC +LD+A + Q M+ G P +++L +
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 95/189 (50%), Gaps = 5/189 (2%)
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A+Q F + + P TY +++ C + +++ AY ++DEMR GI P ++ V
Sbjct: 15 GQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGV 71
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L KAGR +A FK ++ T P + T+ I+V + +V+ A +I++ M
Sbjct: 72 IRGLCKAGRFGDALGYFKTVAGTKCT-PDIITFNILVDALVKSGRVEEAFQIFESMHTSS 130
Query: 252 -VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
LP + Y+T+IN LC + KLD A + M + G P +S L + L G +
Sbjct: 131 QCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKG 190
Query: 311 VVLAQKIDK 319
L Q++ +
Sbjct: 191 FTLLQEMTR 199
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 4/304 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM---KKRRFDPDIKSYTILLEGWGQ 57
M + G ++ +N L+ C + E A E+ M + R P++ SY I++ G+
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFT 215
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + ++ EM D G +P+VV+Y +I+ C A+ D A +F++M KP
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+G S + E ++ + G +P+ TY +++ C + R +A + D M
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI 335
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ GI PN Y I++H G E + + M G P + I+ + A +
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN-GLSPDHHIFNIIFTAYAKKAMI 394
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D AM I+++MK +G+ P + Y LI++LC ++DDA F +M++ G+ P +F++L
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454
Query: 298 KQAL 301
L
Sbjct: 455 VYGL 458
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 156/335 (46%), Gaps = 43/335 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
MD+ G++ + + +ID LCK++ V+RA+ VF +M + PD +Y L+ G+ G+
Sbjct: 230 MDR-GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K ++ M E EM G +PD +YG ++N C+ R EA LF M KP+ I
Sbjct: 289 WKEVVRMLE---EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAI 345
Query: 118 FCTLINGLGSEKRLS-----------------------------------EALQFFGQSK 142
+ LI+G ++ LS EA+ F + K
Sbjct: 346 YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMK 405
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
++G P+ Y A++ A C R++DA ++M G+ PN ++ +++ L + E
Sbjct: 406 QQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWE 465
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
+A + M + G P V + ++ C QV A R+ D M+ G P + Y+TL
Sbjct: 466 KAKEFYFEMLNQ-GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTL 524
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I C ++D+A K ML +G++P ++ L
Sbjct: 525 IGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 157/311 (50%), Gaps = 1/311 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+I+ V++A +F +M R P++ +YT +++G + + + V+++M D G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD +Y +I+ + S ++ E V + EM A KP + + +L+N L + R EA
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F ++G +P Y ++ Y +++ + +++ M + G+ P+ ++I+
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K +EA +F +M ++ G P V Y ++ C +VD A+ +++M GV P
Sbjct: 389 AKKAMIDEAMHIFNKM-KQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ ++++L+ LC DK + A +++ EML+ GIRP F+ + L +G A L
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID 507
Query: 316 KIDKLRKTPLV 326
++++ P V
Sbjct: 508 LMERVGTRPGV 518
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 163/394 (41%), Gaps = 71/394 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + + L++ LC + A+ +FD M ++ P++ Y IL+ G+ +
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGA 358
Query: 61 LLSMNE-----------------------------------VYREMKDDGFEPDVVSYGI 85
L M++ ++ +MK G PDVV+YG
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGA 418
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+A C R D+AV F +M P+ +F +L+ GL + + +A +F+ + +G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 146 FEPEAPTYNAV-----------------------------------VGAYCWSMRINDAY 170
P+ +N + +G +C RI++A
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAA 538
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ +D M G+ P+ TY+ +LH +AGR ++AY VF+ M R G P V TY ++
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN-GITPGVVTYSTILHG 597
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A ++ M G + +Y+ ++N L + +D+A K FQ + +
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+ + AL G E A+ L I P
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ ++ LID LCK V+ A F++M P+I + L+ G
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E Y EM + G PDVV + ++ C+ + +A L ME +P + T
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G R+ EA + G +P+ TYN ++ YC + RI+DAY + EM + G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY +LH L R EA ++ M G + + Y I++ N VD A
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMI-TSGKQWNIWIYNIILNGLSKNNCVDEA 642
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ + ++ + ++ +I +L + +DA F + G+ P + + +
Sbjct: 643 FKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAEN 702
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +EG E L ++K TP
Sbjct: 703 LIEEGYLEEFDDLFSAMEKSGTTP 726
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 112/267 (41%), Gaps = 40/267 (14%)
Query: 78 PDVVSYGIMINAH-----------------------------------CSAKRYDEAVE- 101
PD +Y I+I C AKR EA++
Sbjct: 92 PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF---GQSKKRGFEPEAPTYNAVVG 158
L + M C P + TL+ G +EKR EAL+ S+ R P +Y V+
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
+ +++ AY + EM GI PN TY V+ L KA + A VF++M K G +
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK-GVK 270
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P TY ++ + + +R+ +EM A G+ P + Y +L+N LC+ + +A
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEG 305
F M+ GI+P ++ L +G
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKG 357
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 72/192 (37%), Gaps = 35/192 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + +N L+ C++ ++ A VF +M + P + +Y+ +L G +
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 61 LLSMNEVYREMKDDG-----------------------------------FEPDVVSYGI 85
E+Y M G F+ ++ ++ I
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
MI A + R ++A+ LF + + P +C + L E L E F +K G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Query: 146 FEPEAPTYNAVV 157
P + NA+V
Sbjct: 724 TTPNSRMLNALV 735
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 75/172 (43%), Gaps = 6/172 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ L K+ V+ A ++F + + F +I ++ I++ + ++ +
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATIS 685
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV +Y ++ +E +LF ME + P+ + L+ L ++
Sbjct: 686 SYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDIT 745
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGA------YCWSMRINDAYRMMDEMRK 178
A + + ++ F EA T ++ + + + + YR+++E +K
Sbjct: 746 RAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLNEAKK 797
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 152/324 (46%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + +N L+ ++ V+ A+ + M P++ ++ ++ G +
Sbjct: 176 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGK 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ EM +G PD VSY ++ +C A EA+ +F EM P F +
Sbjct: 236 MEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 295
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ + L A+ Q ++RG + T+ A++ +C ++DA + MR+C
Sbjct: 296 LIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCR 355
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ Y+ +++ GR +EA + M K G +P V TY ++ +C N A
Sbjct: 356 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAK-GLKPDVVTYSTIISAYCKNCDTHSA 414
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M +GVLP YS+LI LC E +L DA F+ M+ +G++P +++L
Sbjct: 415 FELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDG 474
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
EG E A+ L K+ K P
Sbjct: 475 HCKEGNVERALSLHDKMVKAGVLP 498
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 36/297 (12%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK L FN +++ +CK+ +E A++VFD+M + PD SY L+ G+ +
Sbjct: 215 GLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEA 274
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--------EAT------- 109
V+ EM G PDVV++ +I+ C A + AV L R+M E T
Sbjct: 275 LSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDG 334
Query: 110 ------------------NCKPSPHIFC--TLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C+ P + C LING R+ EA + + + +G +P+
Sbjct: 335 FCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPD 394
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
TY+ ++ AYC + + A+ + +M + G+ P+ TY ++ L + R +A+ +FK
Sbjct: 395 VVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFK 454
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
M K G +P TY ++ C V+ A+ + D+M GVLP + YS LIN L
Sbjct: 455 NMI-KLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL 510
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 156/336 (46%), Gaps = 40/336 (11%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLE---GWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+ A+ FD M P++ +Y IL+ G G +K LS + R+M+ G P+VV+
Sbjct: 131 LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALS---ILRDMRGAGCGPNVVT 187
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y ++ A A D A L M KP+ F +++NG+ ++ +A + F +
Sbjct: 188 YNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMM 247
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+ G P+ +YN +VG YC + ++A + EM + GI P+ T+ ++H + KAG E
Sbjct: 248 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 307
Query: 203 EAYSVFKRMS----------------------------------RKPGTEPTVSTYEIVV 228
A ++ ++M R+ +P+V Y ++
Sbjct: 308 WAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALI 367
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+C ++D A + EM+A+G+ P + YST+I++ C A + Q+ML+ G+
Sbjct: 368 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL 427
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P +S+L + L +E A VL + + KL P
Sbjct: 428 PDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQP 463
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 149/331 (45%), Gaps = 14/331 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ F LID CK ++ A M++ R P + Y L+ G+
Sbjct: 316 MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGR 375
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ EM+ G +PDVV+Y +I+A+C A EL ++M P + +
Sbjct: 376 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 435
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L EKRLS+A F K G +P+ TY +++ +C + A + D+M K G
Sbjct: 436 LIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAG 495
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYS-VFKRMSRKPGTEPT-------------VSTYEI 226
+ P+ TY ++++ L K+ R EA +FK +P T + +
Sbjct: 496 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLA 555
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+++ FC ++ A +++ M R +YS LI+ C + A + ++ML G
Sbjct: 556 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
P +L + L + GM A + Q++
Sbjct: 616 FAPNSTSTISLIRGLFENGMVVEADQVIQQL 646
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 16/312 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ F LI +CK+ ++E A + +M++R + ++T L++G+ ++
Sbjct: 281 MTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L R M+ +P VV Y +IN +C R DEA EL EMEA KP + T
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ A + Q ++G P+A TY++++ C R++DA+ + M K G
Sbjct: 401 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ K G E A S+ +M K G P V TY +++ +A+ A
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMV-KAGVLPDVVTYSVLINGLSKSARAMEA 519
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN---------------SLCHEDKLDDACKYFQEMLDI 285
++ ++ +P Y L++ C + +++A K +Q MLD
Sbjct: 520 QQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDR 579
Query: 286 GIRPPGQLFSNL 297
G ++S L
Sbjct: 580 NWNLDGSVYSVL 591
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 121/249 (48%), Gaps = 2/249 (0%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAV 100
+ P + +Y +L +L S + M DG P+V +Y I+I A C EA+
Sbjct: 112 YVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 101 ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
+ R+M C P+ + TL+ + A + G G +P T+N++V
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C + ++ DA ++ DEM + G+ P+ +Y+ ++ KAG + EA SVF M++K G P
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK-GIMPD 289
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V T+ ++ + C ++ A+ + +M+ RG+ ++ LI+ C + LDDA +
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349
Query: 281 EMLDIGIRP 289
M I+P
Sbjct: 350 GMRQCRIKP 358
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 16/235 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL+ + + LID CK +VERA + DKM K PD+ +Y++L+ G +
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515
Query: 61 LLSMNEV----YRE------MKDDGF-----EPDVVSYGIMINAHCSAKRYDEAVELFRE 105
+ ++ Y E K D + ++ S ++ C +EA ++++
Sbjct: 516 AMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQS 575
Query: 106 MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
M N ++ LI+G + +AL F Q +RGF P + + +++ +
Sbjct: 576 MLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGM 635
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
+ +A +++ ++ C + ++ + G + V M+ K G P+
Sbjct: 636 VVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMA-KDGLLPS 689
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P+V Y V+ + +A + A R +D M + GV P ++ Y+ LI +LC +A
Sbjct: 111 GYVPSVLAYNAVL-LALSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++M G P ++ L A G
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAG 199
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 155/310 (50%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + +N LID L K+ + E AQ FD+M+ + PD+ +Y L+ G+ + N
Sbjct: 326 MENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGN 385
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ ++K G P V++Y I+I+ +C + A L EM +C P +
Sbjct: 386 LKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTI 445
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG + L+ FF + +G EP+ YN + A I +A+++ +EM G
Sbjct: 446 LMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRG 505
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I +T TY++++ L K G ++AY ++ +M G TY ++ C ++ A
Sbjct: 506 ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTD-GLRLDCVTYTCLIHAHCERGRLIEA 564
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I+D M A G+ P + Y+ I++ C L A +F++ML+ G+ P ++ L A
Sbjct: 565 KNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHA 624
Query: 301 LRDEGMEETA 310
L G E+A
Sbjct: 625 LCRMGRTESA 634
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ + GL + +N LID C+ +E A+ + ++M + PD+ +YTIL+ G +N
Sbjct: 396 LKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRN 455
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + EM G EPD +Y I+A + A +L EM +
Sbjct: 456 LAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNV 515
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L +A + + G + TY ++ A+C R+ +A + D M G
Sbjct: 516 LIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASG 575
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I +H + G AY F++M + G EP TY +++ C + + A
Sbjct: 576 LSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEE-GVEPNEVTYNVLMHALCRMGRTESA 634
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + EM RG++P + Y+ LI+ C E A + + EM GI P
Sbjct: 635 YQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHP 683
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 124/295 (42%), Gaps = 37/295 (12%)
Query: 31 EVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAH 90
F +M + P +K +L M VY +M G EP + +Y ++++
Sbjct: 180 SAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSF 239
Query: 91 CSAKRYDEAVELFREME--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFG---QSKK-- 143
C A R D+AV L ++ME A C P+ + +INGL + L +A Q SKK
Sbjct: 240 CKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKAS 299
Query: 144 -----------------------------RGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
G P TYN ++ + A D
Sbjct: 300 AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFD 359
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EMR G+ P+ TY+ +++ KAG ++A +F + R G PTV TY I++ +C
Sbjct: 360 EMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRA-GLGPTVLTYNILIDGYCRL 418
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ A R+ +EM LP + Y+ L+N C L +F EML G+ P
Sbjct: 419 GDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 152/325 (46%), Gaps = 6/325 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQ 58
M + G++ + +N L+D+ CK+ +++A + M+ R P+ +Y +++ G ++
Sbjct: 220 MLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARK 279
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
L ++ M+ + +Y +I + ++A L EME P+ +
Sbjct: 280 GELEKAAQLVDIMRLSK-KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTY 338
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
TLI+GL A F + + +G P+ TYN+++ YC + + A + ++++
Sbjct: 339 NTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKR 398
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+GP TY+I++ + G E A + + M+ + P V TY I++ C +
Sbjct: 399 AGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEE-DCLPDVCTYTILMNGSCMVRNLA 457
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
M +DEM ++G+ P Y+T I++ + +A + +EM+ GI ++ L
Sbjct: 458 MVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLI 517
Query: 299 QALRDEGMEETAVVLAQKI--DKLR 321
L G + A VL K+ D LR
Sbjct: 518 DGLCKTGSLKDAYVLWMKMVTDGLR 542
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 1/227 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + +N I + A ++ ++M R D +Y +L++G + +L
Sbjct: 470 GLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDA 529
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M DG D V+Y +I+AHC R EA +F M A+ PS + I+
Sbjct: 530 YVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHT 589
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A +F + + G EP TYN ++ A C R AY+ EM + G+ PN
Sbjct: 590 YCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPN 649
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
TY +++ K G A ++ M +K G P T+ + + F
Sbjct: 650 KYTYTLLIDGSCKEGNWVHAIRLYCEMHQK-GIHPDHCTHNALFKGF 695
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 12/244 (4%)
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
+ A CS + + F+EM P ++ L R + + + G
Sbjct: 170 VPASCST----QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGV 225
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
EP TYN ++ ++C + R++ A ++ +M R G PN TY++V++ L + G E+A
Sbjct: 226 EPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKA 285
Query: 205 YSV--FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
+ R+S+K + TY ++ V+ A + EM+ G++P + Y+TL
Sbjct: 286 AQLVDIMRLSKKA----SAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTL 341
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
I+ L + A F EM G+ P +++L G + A+ L + +
Sbjct: 342 IDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGL 401
Query: 323 TPLV 326
P V
Sbjct: 402 GPTV 405
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+ LC+ E A + F +M +R P+ +YT+L++G ++ N + +Y EM
Sbjct: 618 YNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMH 677
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYD 97
G PD ++ + YD
Sbjct: 678 QKGIHPDHCTHNALFKGFGEGHMYD 702
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 151/323 (46%), Gaps = 2/323 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++FG K + N L+ LC+ HV A F+ MK + +Y I++ GW +
Sbjct: 186 LEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGG-IPFNCMTYNIIIGGWSKYGK 244
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M + M DGF P+ +++ +I A R D+AVE+F ME T C P+ ++
Sbjct: 245 IGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNA 304
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ S + E L+++ +P TY ++ A+ + ++ DA M+DEM G
Sbjct: 305 LISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRG 364
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P T + L + G A ++K+ +RK G ++S Y++++ + M
Sbjct: 365 MIPTTGAITSFIEPLCQYGPPHAAMMIYKK-ARKVGCRISLSAYKLLLMRLSRFGKCGML 423
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +WDEM+ G +Y +IN LC+ +LD A +E L G P + S L
Sbjct: 424 LNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEESLHKGFCPSRLIRSKLNNK 483
Query: 301 LRDEGMEETAVVLAQKIDKLRKT 323
L E A L KI R+
Sbjct: 484 LLASNKVEMAYKLFLKIKIARQN 506
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 130/285 (45%), Gaps = 2/285 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
+K+ D+ +Y ++++ G++K + + +V ++M G P+ + I++++ A++
Sbjct: 116 VKQPTIPKDVDTYNVIIKALGRRKFIEFVVKVLKDMHIQGISPNYETLSIVMDSFIKARQ 175
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+A+E+FR +E K L+ L + A FF + K G TYN
Sbjct: 176 VSKAIEMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFF-NAMKGGIPFNCMTYNI 234
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++G + +I + R + M G PN T+ ++ L +AGR ++A VF M +
Sbjct: 235 IIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHM-EET 293
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P Y ++ F D ++ ++ M + P M Y+ LI + K+ DA
Sbjct: 294 GCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADA 353
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+ EM+ G+ P ++ + L G A+++ +K K+
Sbjct: 354 LEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKV 398
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 75/176 (42%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +LI K+R V A E+ D+M R P + T +E Q + +Y++ +
Sbjct: 337 YTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKAR 396
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + +Y +++ + + L+ EM+ + ++ +INGL + +L
Sbjct: 397 KVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLD 456
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
A+ +S +GF P + + S ++ AY++ +++ N R +
Sbjct: 457 TAVLVMEESLHKGFCPSRLIRSKLNNKLLASNKVEMAYKLFLKIKIARQNDNARRF 512
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 159/345 (46%), Gaps = 34/345 (9%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ DF R++ + K + ++ KM+ D+ S+TIL+ + + L +
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M GF P +V+ G ++N C R+ EAV L M+ P+ I+ T+INGL
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ L+ AL+ F +K+G +A TYN ++ S R DA R++ +M K I PN +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKP--------------------------------- 215
++ +K G EA +++K M R+
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 216 -GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P V TY ++ FC + +V+ M+++ EM +G++ Y+TLI+ C KL+
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
A K F M+D G+ P ++ L L + G E A+V+ + + K
Sbjct: 378 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 152/317 (47%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG + +N +I+ LCK+R + A EVF M+K+ D +Y L+ G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R+M +P+V+ + +I+ EA L++EM + P+ + +
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING L +A F +G P+ TYN ++ +C S R+ D ++ EM G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + TY+ ++H +AG+ A VF RM G P + TY I++ C N +++ A
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + ++++ + + Y+ +I LC DKL +A F+ + G++P + +
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Query: 301 LRDEGMEETAVVLAQKI 317
L +G++ A L +++
Sbjct: 474 LCRKGLQREADKLCRRM 490
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 155/310 (50%), Gaps = 4/310 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G++ + +N LI L S A + M KR+ DP++ +T L++ + ++ N
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL +Y+EM P+V +Y +IN C +A +F M + C P + T
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ + ++ F + +G +A TYN ++ YC + ++N A ++ + M CG
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+I+L L G+ E+A + + + +K + + TY I+++ C ++ A
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDL-QKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P Y T+I+ LC + +A K + M + G P +++ +
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD---ET 505
Query: 301 LRDEGMEETA 310
LRD +A
Sbjct: 506 LRDHYTSLSA 515
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 131/275 (47%), Gaps = 1/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + L++ C+ + A + D M F P++ Y ++ G + ++
Sbjct: 140 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EV+ M+ G D V+Y +I+ ++ R+ +A L R+M P+ F
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ E L EA + + +R P TYN+++ +C + DA M D M G
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ K+ R E+ +F M+ + G TY ++ +C ++++A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
++++ M GV P + Y+ L++ LC+ K++ A
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 1/228 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P +V + ++ ++D + L+ +ME + F LI+ RLS AL
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G+ K GF P T +++ +C R +A ++D M G PN Y+ V++ L K
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
A VF M +K G TY ++ + + A R+ +M R + P +
Sbjct: 197 NRDLNNALEVFYCMEKK-GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++ LI++ E L +A ++EM+ + P +++L G
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG 303
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 1/197 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ +A F + + P + V+ + + + +M GI + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I++H + R A ++ +M K G P++ T ++ FC + A+ + D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKM-MKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG 177
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G +P + +Y+T+IN LC L++A + F M GIR ++ L L + G
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 310 AVVLAQKIDKLRKTPLV 326
A L + + K + P V
Sbjct: 238 AARLLRDMVKRKIDPNV 254
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 154/306 (50%), Gaps = 3/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G + F+ +I L + R AQ FD +K R F+PD+ YT L+ GW +
Sbjct: 212 MEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGE 270
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+++MK G EP+V +Y I+I+A C + A ++F +M + C P+ F
Sbjct: 271 ISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ R + LQ + Q KK G EP+ TYN ++ +C + +A ++++ M K
Sbjct: 331 LMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKK 390
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N T++ + ++ K A+ ++ +M + EP TY I++RMF + DM
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKM-MEAKCEPNTVTYNILMRMFAGSKSTDMV 449
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG-IRPPGQLFSNLKQ 299
+++ +M + V P ++ Y L+ C ++A K F+EM++ + P L+ +
Sbjct: 450 LKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLA 509
Query: 300 ALRDEG 305
LR G
Sbjct: 510 QLRRAG 515
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 149/317 (47%), Gaps = 5/317 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D + K P +N +ID K R + A + D MK R + I+++TIL+ + +
Sbjct: 144 DDYDQKSPHP-YNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLA 202
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ M+D G PD +++ I+I+ +R EA F ++ +P ++ L
Sbjct: 203 SEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNL 261
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+ G +SEA + F K G EP TY+ V+ A C +I+ A+ + +M G
Sbjct: 262 VRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGC 321
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN T++ ++ +KAGR E+ V+ +M +K G EP TY ++ C + ++ A+
Sbjct: 322 APNAITFNNLMRVHVKAGRPEKVLQVYNQM-KKLGCEPDTITYNFLIETHCRDENLENAV 380
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ + M + ++T+ + + ++ A + + +M++ P ++ L +
Sbjct: 381 KVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF 440
Query: 302 RDEGMEETAVVLAQKID 318
G + T +VL K D
Sbjct: 441 --AGSKSTDMVLKMKKD 455
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 116/249 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ +ID LC+ + RA +VF M P+ ++ L+ + +
Sbjct: 285 GIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKV 344
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+VY +MK G EPD ++Y +I HC + + AV++ M C+ + F T+
Sbjct: 345 LQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRY 404
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ ++ A + + + + EP TYN ++ + S + +M +M + PN
Sbjct: 405 IEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPN 464
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ G AY +FK M + P++S YE+V+ Q+ +
Sbjct: 465 VNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELV 524
Query: 245 DEMKARGVL 253
++M +G++
Sbjct: 525 EKMIQKGLV 533
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
SPH + +I+ G ++ A K R E T+ ++ Y + ++A
Sbjct: 150 SPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ M G P+ + IV+ +L + R EA S F S K EP V Y +VR +C
Sbjct: 210 NRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFD--SLKDRFEPDVIVYTNLVRGWCR 267
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
++ A +++ +MK G+ P ++ YS +I++LC ++ A F +MLD G P
Sbjct: 268 AGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+NL + G E + + ++ KL P
Sbjct: 328 FNNLMRVHVKAGRPEKVLQVYNQMKKLGCEP 358
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 154/289 (53%), Gaps = 7/289 (2%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FG++ +L F+ L+ LC+ +HVE A+ +F ++R F DI++ I+L GW N+
Sbjct: 200 EFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIRTMNIILNGWCVLGNVH 258
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+++++ +PDVVSYG MINA + +A+EL+R + T P I +I
Sbjct: 259 EAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKICNNVI 318
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-- 180
+ L +KR+ EAL+ F + ++G P TYN+++ C R + +++EM G
Sbjct: 319 DALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKGGS 378
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T+ +L + + R+++ +V +RM+ K E T Y ++ R++ +
Sbjct: 379 CSPNDVTFGYLLKY---SQRSKDVDAVLERMA-KNKCEMTSDLYNLMFRLYVQWDNEEKV 434
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
IW EM+ G+ P Y+ I+ L + K+ +A YFQEM+ G+ P
Sbjct: 435 REIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 483
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
S ++ +++ LG +R E Q + KR + TY ++ Y + ++++A +
Sbjct: 136 SSLVYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAVGVF 195
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ R+ GI + + +L L + E A ++F R+ G + + T I++ +C
Sbjct: 196 ERRREFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD--IRTMNIILNGWCV 253
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
V A RIW ++ A P + Y T+IN+L + KL A + ++ + + G P ++
Sbjct: 254 LGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKI 313
Query: 294 FSNLKQAL 301
+N+ AL
Sbjct: 314 CNNVIDAL 321
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 101/219 (46%), Gaps = 2/219 (0%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y +++ +R++E ++ EM + + L+N + ++ EA+ F + +
Sbjct: 140 YNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAVGVFERRR 199
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+ G E + ++ ++ C + A + R+ G + RT +I+L+ G
Sbjct: 200 EFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRR-EFGCDIRTMNIILNGWCVLGNVH 258
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA ++K + +P V +Y ++ ++ AM ++ + G P + + + +
Sbjct: 259 EAKRIWKDII-ASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKICNNV 317
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I++LC + ++ +A + F+EM + G P +++L + L
Sbjct: 318 IDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHL 356
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 34/173 (19%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +ID LC + + A EVF +M ++ P++ +Y LL+ + + + E+ EM+
Sbjct: 315 NNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEH 374
Query: 74 DG--FEPDVVSYGIMINAHCSAKRYDEAVE----------------LFR----------- 104
G P+ V++G ++ +K D +E +FR
Sbjct: 375 KGGSCSPNDVTFGYLLKYSQRSKDVDAVLERMAKNKCEMTSDLYNLMFRLYVQWDNEEKV 434
Query: 105 -----EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
EME + P + I+GL ++ ++ EAL +F + +G PE T
Sbjct: 435 REIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 487
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 162/322 (50%), Gaps = 4/322 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M K ++ L FN I+ LCK+ + +A++V + +K F P+I +Y L++G G
Sbjct: 191 MIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGS 250
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + + +EM + P+ +++ +I+ C + A F EM+ KP+
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LINGL + +L EA+ + + G +P T+NA++ +C I +A ++ D++
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ + PN T++ ++ KAG EE +++ M + G P VSTY ++ C N V
Sbjct: 371 EQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDE-GIFPNVSTYNCLIAGLCRNQNV 429
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A ++ +EM+ + + Y+ LI C + + A K EML++G++P ++ L
Sbjct: 430 RAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTL 489
Query: 298 KQALRDEGMEETAVVLAQKIDK 319
EG + A+ + +++K
Sbjct: 490 MDGYCMEGNLKAALKVRTQMEK 511
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID CK +V A+ F++M+++ P+I +Y L+ G L ++ +M
Sbjct: 276 FNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV 335
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P++V++ +IN C K EA +LF ++ + P+ F T+I+ +
Sbjct: 336 GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMME 395
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E G P TYN ++ C + + A ++++EM + + TY+I++
Sbjct: 396 EGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILI 455
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G +A + M G +P TY ++ +C + A+++ +M+ G
Sbjct: 456 GGWCKDGEPSKAEKLLGEM-LNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGK 514
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+ LI C KL+DA + EML+ G+ P
Sbjct: 515 RANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNP 551
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 147/310 (47%), Gaps = 4/310 (1%)
Query: 4 FGLKQELPDFNRLIDTLCK---SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+G + +N LID CK + + RA + +M + P+ ++ L++G+ + +N
Sbjct: 229 WGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDEN 288
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L+ + EM+ G +P++V+Y +IN + + DEA+ L+ +M KP+ F
Sbjct: 289 VLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNA 348
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING +K + EA + F ++ P A T+N ++ A+C + + + + + + M G
Sbjct: 349 LINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG 408
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ L + A + M + V TY I++ +C + + A
Sbjct: 409 IFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE-LKADVVTYNILIGGWCKDGEPSKA 467
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM GV P Y+TL++ C E L A K +M G R ++ L +
Sbjct: 468 EKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKG 527
Query: 301 LRDEGMEETA 310
G E A
Sbjct: 528 FCKTGKLEDA 537
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + +N LI+ L + ++ A ++DKM P+I ++ L+ G+ ++K
Sbjct: 299 MQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKM 358
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ ++ + P+ +++ MI+A C A +E L M P+ +
Sbjct: 359 IKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNC 418
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL + + A + + + + + TYN ++G +C + A +++ EM G
Sbjct: 419 LIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVG 478
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ ++ G + A V +M K G V TY ++++ FC +++ A
Sbjct: 479 VKPNHVTYNTLMDGYCMEGNLKAALKVRTQM-EKEGKRANVVTYNVLIKGFCKTGKLEDA 537
Query: 241 MRIWDEMKARGVLPVMHMYSTL 262
R+ +EM +G+ P Y +
Sbjct: 538 NRLLNEMLEKGLNPNRTTYDVV 559
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
EV+R ++D GF+ + S +++A E +++EM +P+ F INGL
Sbjct: 151 EVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGL 210
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR---MMDEMRKCGIG 182
+L++A K GF P TYN ++ +C YR ++ EM I
Sbjct: 211 CKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKIC 270
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN T++ ++ K A + F+ M R+ G +P + TY ++ N ++D A+
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQ-GLKPNIVTYNSLINGLSNNGKLDEAIA 329
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+WD+M G+ P + ++ LIN C + + +A K F ++ + + P F+ + A
Sbjct: 330 LWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFC 389
Query: 303 DEGMEETAVVL 313
GM E L
Sbjct: 390 KAGMMEEGFAL 400
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 98/187 (52%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID CK+ +E + + M P++ +Y L+ G + +N+ + ++ EM+
Sbjct: 381 FNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEME 440
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ + DVV+Y I+I C +A +L EM KP+ + TL++G E L
Sbjct: 441 NYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLK 500
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL+ Q +K G TYN ++ +C + ++ DA R+++EM + G+ PN TYD+V
Sbjct: 501 AALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVR 560
Query: 193 HHLIKAG 199
+++ G
Sbjct: 561 LEMLEKG 567
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 4/197 (2%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ A + F + + GF+ + N ++ A + + EM K I PN T++I
Sbjct: 146 IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNI 205
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR---IWDEM 247
++ L KAG+ +A V + + + G P + TY ++ C R I EM
Sbjct: 206 FINGLCKAGKLNKAEDVIEDI-KAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
A + P ++TLI+ C ++ + A F+EM G++P +++L L + G
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL 324
Query: 308 ETAVVLAQKIDKLRKTP 324
+ A+ L K+ L P
Sbjct: 325 DEAIALWDKMVGLGLKP 341
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 150/324 (46%), Gaps = 6/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + ++ +LCK+ ++ A+E+ RF P + Y L++G ++
Sbjct: 205 MSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNALIDGMCKEGR 259
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM D+G +P+VVSY +IN+ C + + A LF +M C + H F
Sbjct: 260 IEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTP 319
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G +L EAL + + G EP YN ++ C + + +A ++ D+M++ G
Sbjct: 320 LIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSG 379
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY I++ K+G A + RM G P V TY +V + C N+ D A
Sbjct: 380 CLPNVTTYSILIDGFAKSGDLVGASETWNRMISH-GCRPNVVTYTCMVDVLCKNSMFDQA 438
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++M G P ++T I LC +++ A K + M G P ++ L A
Sbjct: 439 NSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDA 498
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L E A L Q+I+ P
Sbjct: 499 LFRMNKYEEAFGLFQEIEARNLQP 522
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 156/324 (48%), Gaps = 6/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +FG K + +N L+D L + ++ MKK P++ +Y ILL+ +
Sbjct: 135 IGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDR 194
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++++ EM + G PD V+Y M+++ C A + D+A EL A KPS ++
Sbjct: 195 VDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNA 249
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ E R+ A++ G+ G +P +Y+ ++ + C S + A+ + +M G
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N T+ ++ G+ EA ++K M + G EP V Y ++ C N ++ A
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGLCSNGSLEEA 368
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ D+M+ G LP + YS LI+ L A + + M+ G RP ++ +
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L M + A L +K+ TP
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTP 452
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 150/301 (49%), Gaps = 2/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N LI LC + +E A +V D+M++ P++ +Y+IL++G+ + +L+
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+E + M G P+VV+Y M++ C +D+A L +M C P+ F T I G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKG 463
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ A++ + + G P TYN ++ A + +A+ + E+ + PN
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ VL+ +AG EA +F + + GT P TY ++ +C +V +A ++
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVR-GTAPDSITYNTMIHAYCKQGKVKIAAQLV 582
Query: 245 DEMKA-RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ + + + P + Y++LI C+ +++A + + ++ GI P ++ L + D
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642
Query: 304 E 304
Sbjct: 643 S 643
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 162/319 (50%), Gaps = 3/319 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ +I++LC S +VE A +F +M R D +I ++T L++G + L
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++ M DG EP+VV+Y +I+ CS +EA+++ +M+ + C P+ + LI+G
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A + + + G P TY +V C + + A ++++M G PN
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-EIVVRMFCYNAQVDMAMRI 243
T T++ + L GR E A + +RM + G P ++TY E++ +F N + + A +
Sbjct: 454 TMTFNTFIKGLCGNGRVEWAMKLLERM-QGHGCLPNITTYNELLDALFRMN-KYEEAFGL 511
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ E++AR + P + Y+T++ + +A + F + L G P ++ + A
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571
Query: 304 EGMEETAVVLAQKIDKLRK 322
+G + A L +++ +++
Sbjct: 572 QGKVKIAAQLVERVSSMKE 590
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 133/278 (47%), Gaps = 7/278 (2%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMN 65
KQ+L + ++ L R++ F + F +Y +++E G++ + +
Sbjct: 35 KQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQ 94
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ ++MK DG + +IN + ++A+++F + CKP+ I+ L++ L
Sbjct: 95 YILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDAL 154
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
SE + + KK G P TYN ++ A C + R++ A+++ EM G P+
Sbjct: 155 LSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDA 214
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY ++ L KAG+ ++A + R +P+V Y ++ C ++++A+++
Sbjct: 215 VTYTTMVSSLCKAGKIDDARELAGRF------KPSVPVYNALIDGMCKEGRIEVAIKLLG 268
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
EM GV P + YS +INSLC ++ A F +M
Sbjct: 269 EMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + +N L+D L + E A +F +++ R P++ +Y +L G+ +
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFC 119
+ +++ + G PD ++Y MI+A+C + A +L + + P +
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI G + + EA+ F ++ +G P T+NA+V + S+ ++D++ +
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659
Query: 180 G 180
G
Sbjct: 660 G 660
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 47/114 (41%)
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
VL L F ++ + T STY +++ ++DM I +MK
Sbjct: 44 VLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMD 103
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
G+ ++ +IN + A K F + + G +P +++++L AL E
Sbjct: 104 GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSE 157
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 156/301 (51%), Gaps = 13/301 (4%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQKN 60
L++ +PD +N L++ LC + A E+ M D PD+ SY+ ++ G+ ++ +
Sbjct: 44 LRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD 103
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +M D P+VV+Y +I A C A+ D+A+E+ M + P + +
Sbjct: 104 L-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS 156
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++G S + EA+ F + + G EP+ TYN+++ C + R +A ++ D M K G
Sbjct: 157 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 216
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +L G E + + M R G P + I+V + +V+ A
Sbjct: 217 LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILVCAYAKQEKVEEA 275
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M ++ +M+ +G+ P Y T+I+ LC +++DA YF++M+D G+RP ++++L +
Sbjct: 276 MLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHS 335
Query: 301 L 301
L
Sbjct: 336 L 336
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 141/280 (50%), Gaps = 7/280 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
+N +I LCK++ V++A EV M K PD +Y ++ G+ GQ K + +
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF---LK 175
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M+ DG EPDVV+Y +++ C R EA ++F M KP + TL+ G ++
Sbjct: 176 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKG 235
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
L E + G P ++ +V AY ++ +A + +MR+ G+ PN TY
Sbjct: 236 ALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 295
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
V+ L K+GR E+A F++M + G P Y ++ C + + A ++ EM
Sbjct: 296 TVIDVLCKSGRVEDAMLYFEQMIDE-GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLD 354
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
RG+ ++++I+S C E ++ ++ K F M+ IG++P
Sbjct: 355 RGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKP 394
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 140/273 (51%), Gaps = 1/273 (0%)
Query: 33 FDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCS 92
DKM +R P++ +Y ++ + + + EV M G PD ++Y +++ CS
Sbjct: 104 LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+ + EA+ ++M + +P + +L++ L R +EA + F KRG +P+ T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
Y ++ Y + + + ++D M + GI PN + I++ K + EEA VF +M
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM- 282
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
R+ G P TY V+ + C + +V+ AM +++M G+ P +Y++LI+SLC DK
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ A + F EMLD GI F+++ + EG
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEG 375
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIFCTLING 124
V+ E+ G PDV SY I++N C R EA+EL M + +C P + T+ING
Sbjct: 39 VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E L + L + P TYN+++ A C + ++ A ++ M K G+ P+
Sbjct: 98 FFKEGDLDKMLD-------QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++H +G+ +EA K+M R G EP V TY ++ C N + A +I+
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 209
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA---- 300
D M RG+ P + Y TL+ + L + M+ GI P +FS L A
Sbjct: 210 DSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 269
Query: 301 ------------LRDEGMEETAVVLAQKIDKLRKTPLVD 327
+R +G+ AV ID L K+ V+
Sbjct: 270 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVE 308
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N L+D LCK+ A+++FD M KR PDI +Y LL+G+ + L+ M
Sbjct: 181 GVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEM 240
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G P+ + I++ A+ ++ +EA+ +F +M P+ + T+I+
Sbjct: 241 HGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDV 300
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ +A+ +F Q G P++ YN+++ + C + A + EM GI +
Sbjct: 301 LCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS 360
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
T ++ ++ K GR E+ +F M R G +P + T
Sbjct: 361 TIFFNSIIDSHCKEGRVIESGKLFDLMVR-IGVKPDIIT 398
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 156/358 (43%), Gaps = 37/358 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + + L++ +CKS A V D+M+ + P+I +Y +++ G ++
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ + GF+PD+VSY ++ C+A+R+D+ LF EM C P+ F
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ + A+Q Q + G P N V+ A C R++DAY ++ M G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK--PGTEPT------------------ 220
P+T +Y VL L +AGR E A + M RK P E T
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417
Query: 221 --------------VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ TY +V FC +VD A+ +++ + P Y+TL+ L
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 474
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
CH ++LD A + EM+ F+ L +G E A+ L ++ + TP
Sbjct: 475 CHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 145/326 (44%), Gaps = 5/326 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+DK + E+ F+ L+ C+ VERA +V +M + P+ I++ +Q
Sbjct: 284 VDKKCVPNEV-TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGR 342
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G PD +SY ++ C A R++ A EL EM NC P+ F T
Sbjct: 343 VDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNT 402
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I L + + +A++ + G TYNA+V +C R++ A + + +
Sbjct: 403 FICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP--- 459
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT TY +L L A R + A + M +K V T+ ++V FC V+ A
Sbjct: 460 CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAV-TFNVLVSFFCQKGFVEEA 518
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + ++M G P + ++TL++ + + ++A + ++ G+ +S++
Sbjct: 519 MELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDV 578
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L E E A+ + + + P V
Sbjct: 579 LSREDRTEEAIQMLHAVQDMGMRPKV 604
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 156/331 (47%), Gaps = 7/331 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + + ++ LC++ E A+E+ +M ++ P+ ++ + Q+
Sbjct: 353 MGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGL 412
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M + G +V+Y +++ C R D A+ELF + C+P+ + T
Sbjct: 413 IEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTT 469
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL +RL A + + ++ A T+N +V +C + +A ++++M + G
Sbjct: 470 LLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 529
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T++ +L + K +EEA + + K G TY VV + + + A
Sbjct: 530 CTPNLITFNTLLDGITKDCNSEEALELLHGLVSK-GVSLDTITYSSVVDVLSREDRTEEA 588
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ ++ G+ P + MY+ ++ +LC + D A +F M+ G P + L +
Sbjct: 589 IQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEG 648
Query: 301 LRDEG-MEETAVVLAQKIDK--LRKTPLVDR 328
L EG ++E VL++ K L K+ L D+
Sbjct: 649 LAHEGLLKEARYVLSELYAKGVLSKSLLEDQ 679
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 5/314 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + LI K HV A + FD+M ++ PD +YT L++G+GQ ++
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ EM G +PD V+Y +I+ +C A A L EM P+ + LI+GL
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
L A + + +K+G + YN++V C + I A ++M EM GI P+
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY V+ + G ++A+ + + M + G +PTV T+ +++ FC ++ R+
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDR-GLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-KQALRDEG 305
M +G++P Y+TL+ C + ++ K ++ M + G+ P ++ L K +
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658
Query: 306 MEETAVVLAQKIDK 319
++E + + I+K
Sbjct: 659 LKEAWFLYKEMIEK 672
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 2/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +N +I LCK A++V +M ++ PD YT L+ G+ + ++ +
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N+ + EM PD ++Y +I + E LF EM + KP + TLI+
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ A + + G P TY A++ C ++ A ++DEMRK G+ N
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ +++ + KAG E+A + K M G +P TY V+ +C +D A ++
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEM-EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-KQALRD 303
EM RG+ P + ++ L+N C L+D + ML+ GI P ++ L KQ
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621
Query: 304 EGMEETA 310
M T
Sbjct: 622 NSMNTTT 628
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 148/309 (47%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + + LID CK+ + A + ++M + P+I +Y L++G + L +
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
NE+ EM+ G + +V Y M+N C A ++A++L +EME P + T+I+
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A + + RG +P T+N ++ +C + D R++ M + GI P+
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ ++KRM R G P +TY I+++ C + A ++
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRM-RNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM +G +P + Y+ LI + K+ +A + F+EM G+ G++++ +E
Sbjct: 667 KEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEE 726
Query: 305 GMEETAVVL 313
G E + L
Sbjct: 727 GDVEITLNL 735
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 145/270 (53%), Gaps = 2/270 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + LID LCK ++ A E+ D+M+K+ ++ Y ++ G + N
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +EM+ G +PD ++Y +I+A+C D+A +L +EM +P+ F
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG L + + G ++G P+A TYN ++ +C +N ++ MR G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P++ TY+I++ KA +EA+ ++K M K G PTV++Y +++ F ++ A
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK-GYVPTVTSYNALIKRFYKKKKILEA 697
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED 270
+++EM+ G++ +Y+ ++ +C+E+
Sbjct: 698 RELFEEMRGHGLVADGEIYNFFVD-MCYEE 726
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 149/341 (43%), Gaps = 36/341 (10%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQK 59
++G+ +N +I +LC+ V+ A + +M R PD+ SY+ +++G+ G+ K
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 60 NLLSM--------------------------------NEVYREMKDDGFEPDVVSYGIMI 87
L + +V REM PD V Y +I
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 88 NAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
+ A + F EM + P + TLI G G ++ E F + RG +
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P+ TY ++ YC + + +A+ + +EM + G+ PN TY ++ L K G + A +
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
M RK G + V Y +V C ++ A+++ EM+ G+ P Y+T+I++ C
Sbjct: 491 LDEM-RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+D A K QEMLD G++P F+ L GM E
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/202 (20%), Positives = 92/202 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + + +ID C+ +++A ++ +M R P + ++ +L+ G+
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + M + G PD ++Y ++ HC + ++++ M P + +
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + L EA + + ++G+ P +YNA++ + +I +A + +EMR G
Sbjct: 649 LIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHG 708
Query: 181 IGPNTRTYDIVLHHLIKAGRTE 202
+ + Y+ + + G E
Sbjct: 709 LVADGEIYNFFVDMCYEEGDVE 730
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 14/255 (5%)
Query: 80 VVSYGIMI-----NAHCS-----AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
++SYG+++ NA S ++ + A+++F E + S +I + LG
Sbjct: 216 LLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLG--- 272
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ EA + Q R P+ +Y+ V+ YC + A ++MD+M+ G+ PN TY+
Sbjct: 273 KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYN 332
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ L K G++ EA V + M + P Y ++ F V A + +DEM +
Sbjct: 333 SIILLLCKIGKSFEAEKVLREMMSQK-IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS 391
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+ + P Y+TLI K+ + F EM+ G++P ++ L G
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451
Query: 310 AVVLAQKIDKLRKTP 324
A L ++ ++ TP
Sbjct: 452 AFSLHNEMVQMGMTP 466
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW-SMRINDAYR 171
P+P F L LSEA + + G + NA + S I A +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ E GI NT +Y+I+++ L + G+ +EA+ + +M + T P V +Y V+ +
Sbjct: 248 VFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST-PDVVSYSTVIDGY 303
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C+ ++ A+++ D+M+ +G+ P + Y+++I LC K +A K +EM+ I P
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363
Query: 292 QLFSNLKQALRDEGMEETA 310
+++ L G TA
Sbjct: 364 VVYTTLIHGFFKLGHVRTA 382
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 32/140 (22%)
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRM--------------------SRKPGTEPTV 221
GPN +DI L++ G EA + ++ + G E +
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246
Query: 222 ------------STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
++Y I++ C +V A R+ +M R P + YST+I+ CH
Sbjct: 247 KVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHL 306
Query: 270 DKLDDACKYFQEMLDIGIRP 289
+L A K +M G++P
Sbjct: 307 GELKKALKLMDDMQIKGLKP 326
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 150/319 (47%), Gaps = 35/319 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ E FN L+ + + A++VFD+M+ R P + ++ L+ G + ++L ++
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAV 239
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +Y+EM D G +PDV +YG +I C R + AV++F EM T P+ +F TLI+
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E ++ + + + RG P+ YNA+V C + + A +++EM+ G+ P+
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRK------------------------------ 214
TY ++ K G+ + A + ++M+ K
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR 419
Query: 215 ----PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
EP +TY +V+ FC V ++ EM+ +G P + Y+ ++N LC
Sbjct: 420 EMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLG 479
Query: 271 KLDDACKYFQEMLDIGIRP 289
++ +A ML+IG+ P
Sbjct: 480 QMKNADMLLHAMLNIGVSP 498
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 136/275 (49%), Gaps = 1/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ + LI C++ +E A ++F++M+ +P+ +T L++ ++ N
Sbjct: 246 MSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGN 305
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++Y++M+ G PD+V+Y ++N C A+ A + EM+ KP + T
Sbjct: 306 VNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTT 365
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + +L A+ + ++ + TY A++ + R DA R++ EM +
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAA 425
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +V+ + G + + + K M K G +P V TY +++ C Q+ A
Sbjct: 426 LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNK-GKKPGVVTYNVIMNGLCKLGQMKNA 484
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+ M GV P Y+ L++ C K+ ++
Sbjct: 485 DMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANS 519
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 6/198 (3%)
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
A+ P+P + L E L +A + +RG AP + ++ +
Sbjct: 113 ASPGDPAP-LVSELAAAYADEGLLPDACSLVLLALRRGISLPAPVCSGLMSRLPST---P 168
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
+AY ++ G+ P TR +++++ ++ G A VF M R +PTV T+ +
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS--VQPTVVTFNTL 226
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ C +D ++ EM GV P ++ Y LI C ++++A K F EM D G+
Sbjct: 227 ISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGV 286
Query: 288 RPPGQLFSNLKQALRDEG 305
P +F+ L A EG
Sbjct: 287 NPNAVVFTTLIDAHCKEG 304
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/117 (18%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +ID C+ V+ ++ +M+ + P + +Y +++ G + + + + + M
Sbjct: 433 YTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAML 492
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+ G PD ++Y I+++ C + + EL + P ++ +LI+ L +K
Sbjct: 493 NIGVSPDDITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTSLISELAKKK 546
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 4/295 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N +ID CK V+ A E+ + F PD +Y L+ G + ++ E
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ E + G +PD+V Y ++ C A+++ EM C P + +INGL
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 406
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+S+A + +G+ P+ T+N ++ YC ++++ A ++++ M + GI P+T
Sbjct: 407 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 466
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ VL+ L KAG+ E F+ M K G P TY I++ FC + +++ A ++ +
Sbjct: 467 TYNSVLNGLCKAGKVNEVNETFQEMILK-GCHPNPITYNILIENFCRSNKMEEASKVIVK 525
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M G+ P ++TLI C L+ A FQ++ + G F+ L A
Sbjct: 526 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 580
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 3/312 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ L +N I LC++ + A + D M+ PD+ +Y L+ G ++
Sbjct: 216 GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEA 274
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
R M + G PD +Y +I+ +C EA EL ++ P +C+LING
Sbjct: 275 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 334
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +E + AL+ F +++ +G +P+ YN++V C I A ++M+EM + G P+
Sbjct: 335 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 394
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+TY+IV++ L K G +A V K G P V T+ ++ +C ++D A+++
Sbjct: 395 IQTYNIVINGLCKMGNISDATVVMNDAIMK-GYLPDVFTFNTLIDGYCKRLKLDSALQLV 453
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RD 303
+ M G+ P Y++++N LC K+++ + FQEM+ G P ++ L + R
Sbjct: 454 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 513
Query: 304 EGMEETAVVLAQ 315
MEE + V+ +
Sbjct: 514 NKMEEASKVIVK 525
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 4/286 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K +PD + LI+ LC VERA E+F++ + + PDI Y L++G Q +L
Sbjct: 318 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 377
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+V EM ++G PD+ +Y I+IN C +A + + P F TLI
Sbjct: 378 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 437
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +L ALQ + + G P+ TYN+V+ C + ++N+ EM G
Sbjct: 438 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 497
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY+I++ + ++ + EEA V +MS++ G P ++ ++ FC N ++ A
Sbjct: 498 PNPITYNILIENFCRSNKMEEASKVIVKMSQE-GLHPDAVSFNTLIYGFCRNGDLEGAYL 556
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
++ +++ +G ++TLI + + + A K F EML G R
Sbjct: 557 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 602
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 148/297 (49%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N L+ LC + A +V ++M + PDI++Y I++ G + N+
Sbjct: 355 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 414
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V + G+ PDV ++ +I+ +C + D A++L M P + +++NG
Sbjct: 415 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 474
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +++E + F + +G P TYN ++ +C S ++ +A +++ +M + G+ P+
Sbjct: 475 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 534
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+++ +++ + G E AY +F+++ K G T T+ ++ F + MA +I+
Sbjct: 535 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEK-GYSATADTFNTLIGAFSGKLNMHMAEKIF 593
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
DEM ++G + Y LI+ C +D A + EM+ G P F + +L
Sbjct: 594 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 650
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ +N +I+ LCK ++ A V + + + PD+ ++ L++G+ ++
Sbjct: 386 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 445
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L S ++ M + G PD ++Y ++N C A + +E E F+EM C P+P +
Sbjct: 446 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 505
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++ EA + + + G P+A ++N ++ +C + + AY + ++ + G
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
T++ ++ A +F M K G TY +++ C A VD A
Sbjct: 566 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK-GHRADSYTYRVLIDGSCKTANVDRA 624
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM +G +P M + +INSL ++ A M+ IG+ P
Sbjct: 625 YMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 141/306 (46%), Gaps = 6/306 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD F P +N ++D L + + ++A +V+ +M PD+ ++TI L +
Sbjct: 76 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 135
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R + G V+Y ++ + +A +LF +M T+ P+ F
Sbjct: 136 PHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 191
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ L + EA G+ +RG TYN + C + R+ +A R++D MR
Sbjct: 192 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 251
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ L K +EA +RM + G P TY ++ +C + V A
Sbjct: 252 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ-GCLPDDFTYNTIIDGYCKISMVQEA 309
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +G +P Y +LIN LC E ++ A + F E GI+P ++++L +
Sbjct: 310 TELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKG 369
Query: 301 LRDEGM 306
L +G+
Sbjct: 370 LCLQGL 375
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA--PTYNAVVGAYCWSMRINDAYRMMDE 175
+C LI L S R+ ++ R P P Y A + AY + R+ DA +
Sbjct: 17 YCALIRPLASAGRVDAVDAAVASARSR-LSPATIHPLYVASIRAYARAGRLRDAVDAFER 75
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M P Y+ ++ L+ A ++A+ V+ RM G P + T+ I +R FC A
Sbjct: 76 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM-LAAGVSPDLHTHTIRLRSFCLTA 134
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+ +A+R+ + RG + Y T++ L DA + F +ML + P F+
Sbjct: 135 RPHIALRLLRALPHRGAVA----YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFN 190
Query: 296 NLKQALRDEG-MEETAVVLAQKIDK 319
+ AL G + E ++L + I +
Sbjct: 191 KVLHALCKRGDVLEAGLLLGKVIQR 215
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + FN LI C++ +E A +F K++++ + ++ L+ + + N
Sbjct: 526 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 585
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G D +Y ++I+ C D A EM PS F
Sbjct: 586 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 645
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
+IN L R+ +A+ K G PE
Sbjct: 646 VINSLTVNHRVFQAVGIIHIMVKIGVVPEV 675
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
++ I RL +A+ F + P AP YNA++ A + + A+++ M
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ P+ T+ I L R A + + + + V+ +V ++ +
Sbjct: 112 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHT 167
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
D A +++D+M V P + ++ ++++LC
Sbjct: 168 HD-ARQLFDQMLHTHVFPNLAAFNKVLHALC 197
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 19/335 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N +ID +CK VE A+ +F++MK R PD +Y +++G+G+ L
Sbjct: 90 GAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDT 149
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EMKD EPDV++Y +IN C + + +E FREM+ KP+ + TL++
Sbjct: 150 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDA 209
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + +A++F+ ++ G P TY +++ AYC ++DA+R+ +EM + G+ N
Sbjct: 210 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWN 269
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L E + M + + TV T+ +++ C N V A+ +
Sbjct: 270 VVTYTALIDGLCGWENPTEGLHLLDEMV-ELDIKVTVVTFCVLIDGLCKNKLVSKAIDYF 328
Query: 245 DEMKAR-GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS-----NLK 298
+ G+ +Y+ +I+ LC ++++ A F++M G+ P ++ N K
Sbjct: 329 GRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFK 388
Query: 299 Q-------ALRDEGMEETAVVLAQKIDKLRKTPLV 326
Q ALRD+ M ET + K+D L T LV
Sbjct: 389 QGNVLEALALRDK-MVETGM----KLDLLAYTSLV 418
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 18/332 (5%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L L VE A + F KMK+ R P +S LL + + + +++M
Sbjct: 28 FDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 87
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P V +Y IMI+ C + A LF EM+ P + ++I+G G RL
Sbjct: 88 GAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLD 147
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + FF + K EP+ TYNA++ +C ++ EM++ G+ PN +Y ++
Sbjct: 148 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLV 207
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G ++A + M R+ G P TY ++ +C + A R+ +EM GV
Sbjct: 208 DAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGV 266
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL----------- 301
+ Y+ LI+ LC + + EM+++ I+ F L L
Sbjct: 267 EWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAID 326
Query: 302 ------RDEGMEETAVVLAQKIDKLRKTPLVD 327
D G++ A + ID L K V+
Sbjct: 327 YFGRISNDFGLQANAAIYTAMIDGLCKGNQVE 358
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 146/335 (43%), Gaps = 9/335 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +F + + N L+ K + + F M P + +Y I+++ ++ +
Sbjct: 51 MKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGD 110
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ EMK G PD V+Y MI+ R D+ V F EM+ C+P +
Sbjct: 111 VEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 170
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN +L + L+FF + K+ G +P +Y+ +V A+C + A + +MR+ G
Sbjct: 171 LINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 230
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ K G +A+ + M + G E V TY ++ C
Sbjct: 231 LVPNEYTYTSLIDAYCKIGNLSDAFRLANEM-LQVGVEWNVVTYTALIDGLCGWENPTEG 289
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML-DIGIRPPGQLFSNLKQ 299
+ + DEM + + + LI+ LC + A YF + D G++ +++ +
Sbjct: 290 LHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMID 349
Query: 300 ALRDEGMEETAVVLAQKI-------DKLRKTPLVD 327
L E A L +++ D+ T L+D
Sbjct: 350 GLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMD 384
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 36/242 (14%)
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK--------------------------- 143
C P +F L + L + EA+Q F + K+
Sbjct: 21 CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 80
Query: 144 --------RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
G +P TYN ++ C + A + +EM+ G+ P+T TY+ ++
Sbjct: 81 RFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF 140
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K GR ++ F+ M + EP V TY ++ FC ++ + + EMK G+ P
Sbjct: 141 GKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPN 199
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ YSTL+++ C E + A K++ +M +G+ P +++L A G A LA
Sbjct: 200 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLAN 259
Query: 316 KI 317
++
Sbjct: 260 EM 261
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ FGL+ + +ID LCK VE A +F++M ++ PD +YT L++G +Q N+
Sbjct: 333 NDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNV 392
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
L + +M + G + D+++Y ++ + +A EM P
Sbjct: 393 LEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 444
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 78/179 (43%), Gaps = 1/179 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQK 59
M + +K + F LID LCK++ V +A + F ++ + YT +++G +
Sbjct: 296 MVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGN 355
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + ++ +M G PD +Y +++ + EA+ L +M T K +
Sbjct: 356 QVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYT 415
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+L+ GL +L +A F + G P+ +V+ + IN+A + + K
Sbjct: 416 SLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMK 474
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 159/345 (46%), Gaps = 34/345 (9%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ DF R++ + K + ++ KM+ D+ S+TIL+ + + L +
Sbjct: 603 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M GF P +V+ G ++N C R+ EAV L M+ P+ I+ T+INGL
Sbjct: 663 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 722
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ L+ AL+ F +K+G +A TYN ++ S R DA R++ +M K I PN +
Sbjct: 723 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 782
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKP--------------------------------- 215
++ +K G EA +++K M R+
Sbjct: 783 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 842
Query: 216 -GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P V TY ++ FC + +V+ M+++ EM +G++ Y+TLI+ C KL+
Sbjct: 843 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 902
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
A K F M+D G+ P ++ L L + G E A+V+ + + K
Sbjct: 903 AQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 947
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 152/317 (47%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG + +N +I+ LCK+R + A EVF M+K+ D +Y L+ G
Sbjct: 700 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 759
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R+M +P+V+ + +I+ EA L++EM + P+ + +
Sbjct: 760 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 819
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING L +A F +G P+ TYN ++ +C S R+ D ++ EM G
Sbjct: 820 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 879
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + TY+ ++H +AG+ A VF RM G P + TY I++ C N +++ A
Sbjct: 880 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEKA 938
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + ++++ + + Y+ +I LC DKL +A F+ + G++P + +
Sbjct: 939 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 998
Query: 301 LRDEGMEETAVVLAQKI 317
L +G++ A L +++
Sbjct: 999 LCRKGLQREADKLCRRM 1015
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 153/304 (50%), Gaps = 4/304 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G++ + +N LI L S A + M KR+ DP++ +T L++ + ++ N
Sbjct: 735 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 794
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL +Y+EM P+V +Y +IN C +A +F M + C P + T
Sbjct: 795 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 854
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ + ++ F + +G +A TYN ++ YC + ++N A ++ + M CG
Sbjct: 855 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 914
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+I+L L G+ E+A + + + +K + + TY I+++ C ++ A
Sbjct: 915 VSPDIVTYNILLDCLCNNGKIEKALVMVEDL-QKSEMDVDIITYNIIIQGLCRTDKLKEA 973
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P Y T+I+ LC + +A K + M + G P +++ +
Sbjct: 974 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD---ET 1030
Query: 301 LRDE 304
LRD
Sbjct: 1031 LRDH 1034
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 145/323 (44%), Gaps = 4/323 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G+ +L F LI C+ + A V KM K ++P I ++ LL G+
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G+EP+VV Y +I+ C + A+EL EME + T
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL R S+A + KR P+ T+ A++ + +++A + EM +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +++ L GR +A F M+ K G P V TY ++ FC VD
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK-GCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+++ M G + Y+TLI+ C KL A F M+ + P L
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 301 LRDEGMEETAVVLAQKIDKLRKT 323
L G E+A+V K D +R++
Sbjct: 396 LCVNGEIESALV---KFDDMRES 415
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 4/279 (1%)
Query: 7 KQELP---DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
Q LP DF RL+ R E KM+ D+ S+TIL+ + + L
Sbjct: 65 SQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSF 124
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V +M G+EP +V++G +++ C R +A L M + +P+ ++ TLI+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL L+ AL+ + +K+G + TYN ++ C+S R +DA RM+ +M K I P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ T+ ++ +K G +EA ++K M + +P TY ++ C + ++ A +
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMI-QSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+D M ++G P + Y+TLI+ C +D+ K FQ M
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + +N LID LCK+ + A E+ ++M+K+ D+ +Y LL G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R+M PDVV++ +I+ DEA EL++EM ++ P+ + +
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL RL +A + F +G P TYN ++ +C +++ ++ M G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY+ ++H + G+ A +F M + T P + T+ I++ C N +++ A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT-PDIITHCILLHGLCVNGEIESA 405
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +D+M+ + Y+ +I+ LC DK++ A + F + G++P + ++ +
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 301 LRDEG 305
L G
Sbjct: 466 LCKNG 470
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 131/275 (47%), Gaps = 1/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + L++ C+ + A + D M F P++ Y ++ G + ++
Sbjct: 665 MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EV+ M+ G D V+Y +I+ ++ R+ +A L R+M P+ F
Sbjct: 725 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ E L EA + + +R P TYN+++ +C + DA M D M G
Sbjct: 785 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ K+ R E+ +F M+ + G TY ++ +C ++++A
Sbjct: 845 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ-GLVGDAFTYNTLIHGYCQAGKLNVA 903
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
++++ M GV P + Y+ L++ LC+ K++ A
Sbjct: 904 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 938
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL ++ +N L+ LC S A + M KR +PD+ ++T L++ + +Q N
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+Y+EM +P+ V+Y +IN C R +A + F M + C P+ + T
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + + E ++ F + GF + TYN ++ YC ++ A + M
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ I+LH L G E A F M R+ + Y I++ C +V+ A
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDM-RESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
++ + GV P Y+ +I LC +A + + M + GI
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 6/290 (2%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
S E A +F +M + P I +T LL + ++ ++M+ G D+ S
Sbjct: 49 SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ I+I+ C R A+ + +M +PS F +L++G R+ +A
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
K G+EP YN ++ C + +N A +++EM K G+G + TY+ +L L +GR
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
+A + + M ++ P V T+ ++ +F +D A ++ EM V P Y+++
Sbjct: 229 DAARMLRDMMKRS-INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-----KQALRDEGME 307
IN LC +L DA K F M G P ++ L K + DEGM+
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 6/229 (2%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
R+++A LF EM + PS F L+ + +R + F + + G + ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ +C R++ A ++ +M K G P+ T+ +LH R +A+S+ M K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV-K 169
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G EP V Y ++ C N ++++A+ + +EM+ +G+ + Y+TL+ LC+ + D
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 275 ACKYFQEMLDIGIRPPGQLFSNL-----KQALRDEGMEETAVVLAQKID 318
A + ++M+ I P F+ L KQ DE E ++ +D
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 145/357 (40%), Gaps = 44/357 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I LCK+ VE+A E+F ++ PD ++YTI++ G + +E+ R MK
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK 483
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP------SPHIFCTLINGL- 125
++G + + + H S+ + + ++ L E + P P F + + G
Sbjct: 484 EEGIICQMNAEDDHLEEHSSSNK-EISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFV 542
Query: 126 ---------GSEKRLSEALQFFGQSKKRGF------EPEAPTYNAVVGAYCWSMRINDAY 170
G+ S + F G S + E ++ +C ++
Sbjct: 543 RRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIP 602
Query: 171 RMMDEMRKCGIGPNTRTYDIVL---HHLIKAGRTEEAYS------VFKRMSR-------- 213
++D R + +DIV+ H + G + + YS F R SR
Sbjct: 603 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662
Query: 214 ----KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
K G P++ T ++ FC + A+ + D M G +P + +Y+T+IN LC
Sbjct: 663 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 722
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
L++A + F M GIR ++ L L + G A L + + K + P V
Sbjct: 723 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 779
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 1/228 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P +V + ++ ++D + L+ +ME + F LI+ RLS AL
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G+ K GF P T +++ +C R +A ++D M G PN Y+ V++ L K
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
A VF M +K G TY ++ + + A R+ +M R + P +
Sbjct: 722 NRDLNNALEVFYCMEKK-GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 780
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++ LI++ E L +A ++EM+ + P +++L G
Sbjct: 781 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHG 828
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 164/325 (50%), Gaps = 8/325 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ GL++ N L+DTLCK + V++A+E+F ++K+ P+ ++ I + GW +
Sbjct: 169 LQALGLEKNTESMNLLLDTLCKEKFVQQAREIFLELKQ-HIAPNAHTFNIFIHGWCKICR 227
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +EMK GF P V+SY +I +C + EL EM+A C + + +
Sbjct: 228 VDEAHWTIQEMKGYGFHPCVISYSTLIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTS 287
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD-EMRKC 179
++ LG K+ EAL+ + + G P+ +N+++ + R++DA + EM K
Sbjct: 288 IMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKA 347
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PNT TY+ ++ + + A + K M G +P TY +++ + ++D
Sbjct: 348 GVSPNTSTYNSMISMFCYHAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDG 407
Query: 240 AM-RIWDEMKARGVLPV-MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ I ++M + L + + Y+ LI+ LC ED+ + A F+EM+D I P +
Sbjct: 408 VLSEILNDMINKQHLSLDLSTYTLLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRTC--- 464
Query: 298 KQALRDEGMEETAVVLAQKIDKLRK 322
+ L DE ++ A+KI+ L K
Sbjct: 465 -RLLLDEVKQKNMYQAAEKIEDLMK 488
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 3/193 (1%)
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A++ F + G E + N ++ C + A + E+++ I PN T++I +
Sbjct: 161 DAVRIFDDLQALGLEKNTESMNLLLDTLCKEKFVQQAREIFLELKQ-HIAPNAHTFNIFI 219
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H K R +EA+ + M + G P V +Y +++ +C + DEM+A+G
Sbjct: 220 HGWCKICRVDEAHWTIQEM-KGYGFHPCVISYSTLIQCYCQEGNFSRVYELLDEMQAQGC 278
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAV 311
+ Y++++ +L K ++A K + M G RP F++L L G +++ A
Sbjct: 279 SANVITYTSIMCALGKAKKFEEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAAD 338
Query: 312 VLAQKIDKLRKTP 324
V ++ K +P
Sbjct: 339 VFKVEMPKAGVSP 351
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 141/289 (48%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I+ L K+ ++ A+ + ++M R PD ++ L+ Q L ++ RE+
Sbjct: 340 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELT 399
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV ++ I+INA C + LF EM+++ C P + LI+ L S +L
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLG 459
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL + + G TYN ++ A C MRI +A + D+M GI + T++ ++
Sbjct: 460 NALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLI 519
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KA R ++A + ++M K G +P TY ++ +C + A I + M A G
Sbjct: 520 DGLCKAKRIDDATELIEQMV-KEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGF 578
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ Y TLIN LC + A K + M GIRP + ++ + Q+L
Sbjct: 579 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 627
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 2/305 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ FN LI+ LCK +F++MK PD +Y IL++ L +
Sbjct: 402 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNA 461
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM+ +G V+Y +I+A C R +EA E+F +M+A S F TLI+G
Sbjct: 462 LDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L KR+ +A + Q K G +P TYN+++ YC I A +++ M G +
Sbjct: 522 LCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ L KAGRT+ A + + M R G PT Y V++ + A+ ++
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGM-RIKGIRPTPKAYNPVIQSLFRRNNLRDALNLF 640
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK-LDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM G P Y + SLC + +A + EM++ G P F L + L +
Sbjct: 641 REMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLN 700
Query: 304 EGMEE 308
GM++
Sbjct: 701 LGMDD 705
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 137/288 (47%), Gaps = 1/288 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D FG++ + FN L++ L + ++ + V+++M R PD+ + L++ + +
Sbjct: 154 DTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQV 213
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ + EM G PD ++ ++ + A+ + +M C P+ L
Sbjct: 214 RTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVL 273
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
ING R+ +AL + Q GFEP+ TYN V C + ++ A ++MD M + G
Sbjct: 274 INGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGH 333
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY+ V++ L K G +EA + +M + G P +T+ ++ +++ A+
Sbjct: 334 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR-GCLPDTTTFNTLIVALSSQNRLEEAL 392
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ E+ +G+ P ++ ++ LIN+LC + F+EM G P
Sbjct: 393 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 127/275 (46%), Gaps = 5/275 (1%)
Query: 50 ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
+L+EG L + VY EM G +PDVV+ +I A C A + AV + EM +
Sbjct: 171 VLVEG----SKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSH 226
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
P F TL+ G E + AL+ + + G P T N ++ YC R+ DA
Sbjct: 227 GVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDA 286
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ + G P+ TY+ +H L + G A V M ++ G +P V TY V+
Sbjct: 287 LGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQE-GHDPDVFTYNTVIN 345
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
N ++D A I ++M RG LP ++TLI +L +++L++A +E+ G+ P
Sbjct: 346 CLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSP 405
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+ L AL G + L +++ TP
Sbjct: 406 DVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP 440
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G+ + FN LID LCK++ ++ A E+ ++M K P+ +Y +L + +Q N
Sbjct: 503 MDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGN 562
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M +GFE DVV+YG +IN C A R A++L R M +P+P +
Sbjct: 563 IKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 622
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC-WSMRINDAYRMMDEMRKC 179
+I L L +AL F + + G P+A TY V + C I +A+ + EM
Sbjct: 623 VIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNK 682
Query: 180 GIGPNTRTYDIVLHHLIKAG 199
G P ++ ++ L+ G
Sbjct: 683 GFMPEFSSFRMLAEGLLNLG 702
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 149/348 (42%), Gaps = 42/348 (12%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ D +RL+ L + E A + + R F P Y +++ G M +
Sbjct: 53 ISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLV 112
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF---REMEATNCKPSPHIFCTLINGL 125
REM+ +G + V + ++ +R+D+AV+L + + + +F L+N L
Sbjct: 113 REMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVL 172
Query: 126 --GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GS+ +L E++ + + RG +P+ T N ++ A C + ++ A M++EM G+ P
Sbjct: 173 VEGSKLKLLESV--YNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAP 230
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSV----------------------FKRMSR-------- 213
+ T+ ++ I+ G E A V + +M R
Sbjct: 231 DETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYI 290
Query: 214 ----KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
G EP TY V C N V A+++ D M G P + Y+T+IN L
Sbjct: 291 QQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN 350
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+LD+A +M+D G P F+ L AL + E A+ LA+++
Sbjct: 351 GELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL 398
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 2/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + +N +ID LCK +E A+EVFD+M + ++ L++G + K
Sbjct: 468 MESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKR 527
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M +G +P+ ++Y ++ +C +A ++ M A + + T
Sbjct: 528 IDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL R AL+ + +G P YN V+ + + DA + EM + G
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVG 647
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIV 227
P+ TY IV L + G +EA+ M K G P S++ ++
Sbjct: 648 EPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNK-GFMPEFSSFRML 694
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 4/295 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N +ID CK V+ A E+ + F PD +Y L+ G + ++ E
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ E + G +PD+V Y ++ C A+++ EM C P + +INGL
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 407
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+S+A + +G+ P+ T+N ++ YC ++++ A ++++ M + GI P+T
Sbjct: 408 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 467
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ VL+ L KAG+ E F+ M K G P TY I++ FC + +++ A ++ +
Sbjct: 468 TYNSVLNGLCKAGKVNEVNETFQEMILK-GCHPNPITYNILIENFCRSNKMEEASKVIVK 526
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M G+ P ++TLI C L+ A FQ++ + G F+ L A
Sbjct: 527 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 581
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 3/312 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ L +N I LC++ + A + D M+ PD+ +Y L+ G ++
Sbjct: 217 GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEA 275
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
R M + G PD +Y +I+ +C EA EL ++ P +C+LING
Sbjct: 276 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 335
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +E + AL+ F +++ +G +P+ YN++V C I A ++M+EM + G P+
Sbjct: 336 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 395
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+TY+IV++ L K G +A V K G P V T+ ++ +C ++D A+++
Sbjct: 396 IQTYNIVINGLCKMGNISDATVVMNDAIMK-GYLPDVFTFNTLIDGYCKRLKLDSALQLV 454
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RD 303
+ M G+ P Y++++N LC K+++ + FQEM+ G P ++ L + R
Sbjct: 455 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 514
Query: 304 EGMEETAVVLAQ 315
MEE + V+ +
Sbjct: 515 NKMEEASKVIVK 526
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 4/286 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K +PD + LI+ LC VERA E+F++ + + PDI Y L++G Q +L
Sbjct: 319 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 378
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+V EM ++G PD+ +Y I+IN C +A + + P F TLI
Sbjct: 379 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 438
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +L ALQ + + G P+ TYN+V+ C + ++N+ EM G
Sbjct: 439 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 498
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY+I++ + ++ + EEA V +MS++ G P ++ ++ FC N ++ A
Sbjct: 499 PNPITYNILIENFCRSNKMEEASKVIVKMSQE-GLHPDAVSFNTLIYGFCRNGDLEGAYL 557
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
++ +++ +G ++TLI + + + A K F EML G R
Sbjct: 558 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 603
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 148/297 (49%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N L+ LC + A +V ++M + PDI++Y I++ G + N+
Sbjct: 356 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 415
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V + G+ PDV ++ +I+ +C + D A++L M P + +++NG
Sbjct: 416 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 475
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +++E + F + +G P TYN ++ +C S ++ +A +++ +M + G+ P+
Sbjct: 476 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 535
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+++ +++ + G E AY +F+++ K G T T+ ++ F + MA +I+
Sbjct: 536 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEK-GYSATADTFNTLIGAFSGKLNMHMAEKIF 594
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
DEM ++G + Y LI+ C +D A + EM+ G P F + +L
Sbjct: 595 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 651
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ +N +I+ LCK ++ A V + + + PD+ ++ L++G+ ++
Sbjct: 387 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 446
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L S ++ M + G PD ++Y ++N C A + +E E F+EM C P+P +
Sbjct: 447 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 506
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++ EA + + + G P+A ++N ++ +C + + AY + ++ + G
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
T++ ++ A +F M K G TY +++ C A VD A
Sbjct: 567 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK-GHRADSYTYRVLIDGSCKTANVDRA 625
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM +G +P M + +INSL ++ A M+ IG+ P
Sbjct: 626 YMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 141/306 (46%), Gaps = 6/306 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD F P +N ++D L + + ++A +V+ +M PD+ ++TI L +
Sbjct: 77 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 136
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R + G V+Y ++ + +A +LF +M T+ P+ F
Sbjct: 137 PHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 192
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ L + EA G+ +RG TYN + C + R+ +A R++D MR
Sbjct: 193 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 252
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ L K +EA +RM + G P TY ++ +C + V A
Sbjct: 253 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ-GCLPDDFTYNTIIDGYCKISMVQEA 310
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +G +P Y +LIN LC E ++ A + F E GI+P ++++L +
Sbjct: 311 TELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKG 370
Query: 301 LRDEGM 306
L +G+
Sbjct: 371 LCLQGL 376
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA--PTYNAVVGAYCWSMRINDAYRMMDE 175
+C LI L S R+ ++ R P P Y A + AY + R+ DA +
Sbjct: 18 YCALIRPLASAGRVDAVDAAVASARSR-LSPATIHPLYVASIRAYARAGRLRDAVDAFER 76
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M P Y+ ++ L+ A ++A+ V+ RM G P + T+ I +R FC A
Sbjct: 77 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM-LAAGVSPDLHTHTIRLRSFCLTA 135
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+ +A+R+ + RG + Y T++ L DA + F +ML + P F+
Sbjct: 136 RPHIALRLLRALPHRGAVA----YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFN 191
Query: 296 NLKQALRDEG-MEETAVVLAQKIDK 319
+ AL G + E ++L + I +
Sbjct: 192 KVLHALCKRGDVLEAGLLLGKVIQR 216
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 65/150 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + FN LI C++ +E A +F K++++ + ++ L+ + + N
Sbjct: 527 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 586
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G D +Y ++I+ C D A EM PS F
Sbjct: 587 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 646
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
+IN L R+ +A+ K G PE
Sbjct: 647 VINSLTVNHRVFQAVGIIHIMVKIGVVPEV 676
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
++ I RL +A+ F + P AP YNA++ A + + A+++ M
Sbjct: 53 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ P+ T+ I L R A + + + + V+ +V ++ +
Sbjct: 113 LAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHT 168
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
D A +++D+M V P + ++ ++++LC
Sbjct: 169 HD-ARQLFDQMLHTHVFPNLAAFNKVLHALC 198
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+++ + FN +I +C++ ++ A+ + +M + PD+ +Y L++G +
Sbjct: 266 MQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGR 325
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ +M G +P+ V + I+I+AHC + +EL REM +P +
Sbjct: 326 IEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNA 385
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + L A + + G P+ TY ++ YC ++ A + M G
Sbjct: 386 IVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 445
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+G + TY ++ L KAGR+ +A V M + G EP +TY +V+ FC V
Sbjct: 446 VGLDEVTYTALISGLSKAGRSADAERVLGEM-MEAGLEPDNTTYTMVIDAFCRKGDVKTG 504
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+R+ EM+ +G P + Y+ ++N C ++ +A M++IG+ P
Sbjct: 505 LRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSP 553
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 136/274 (49%), Gaps = 1/274 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ + LI LC+ +E A+ VF+KM R P+ +TIL++ ++ +
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+M E++REM++ G PD V+Y ++N C A+ A + EM + +P + T
Sbjct: 361 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 420
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G E+ L A++ G + TY A++ + R DA R++ EM + G
Sbjct: 421 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 480
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +V+ + G + + K M K G +P V TY +++ FC Q+ A
Sbjct: 481 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK-GRKPGVVTYNVIMNGFCKLGQMKNA 539
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
+ + M GV P Y+ L++ C K+ D
Sbjct: 540 DMLLNAMINIGVSPDDITYNILLDGHCKHGKVTD 573
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 36/263 (13%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P+ K + +L+ + L S V+ EM+ G VVS+ MI+ C A D A L
Sbjct: 238 PEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETL 297
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
R R+SEA G P+ TY A++ C
Sbjct: 298 HR-------------------------RMSEA----------GVTPDVYTYGALIQGLCR 322
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
RI DA + ++M G+ PN + I++ K G E + + M R+ G P
Sbjct: 323 VGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREM-RERGVRPDAV 381
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY +V C + A I EM++ G+ P Y+TLI+ C E++LD A + Q M
Sbjct: 382 TYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNM 441
Query: 283 LDIGIRPPGQLFSNLKQALRDEG 305
+ G+ ++ L L G
Sbjct: 442 VAEGVGLDEVTYTALISGLSKAG 464
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
EA + ++ P +F L+ L L+ A F + + RG ++N ++
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
C + ++ A + M + G+ P+ TY ++ L + GR E+A VF++M + G
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGR-GM 341
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P + I++ C + + + EM+ RGV P Y+ ++N LC L A
Sbjct: 342 KPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASG 401
Query: 278 YFQEMLDIGIRPPGQLFSNL 297
EM G+RP ++ L
Sbjct: 402 IVVEMRSAGLRPDTVTYTTL 421
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/102 (20%), Positives = 51/102 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + + +ID C+ V+ + +M+ + P + +Y +++ G+ +
Sbjct: 476 MMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQ 535
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
+ + + + M + G PD ++Y I+++ HC + + EL
Sbjct: 536 MKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 577
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 160/344 (46%), Gaps = 23/344 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G++ +L N LI+ C + V K+ KR + PD + L++G GQ K
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L ++ ++ GF+ + VSY +IN C A++L R+++ KP+ ++ T+
Sbjct: 149 LHFHD---KLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 205
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ L + +SEA F + +G + TY+ ++ +C ++ +A +++EM I
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTI 265
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY+I++ L K G+ +EA SV M K +P V TY ++ + +V A
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVM-LKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+++ M GV P +H Y+ LIN C +D+A F+EM + P +S+L L
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 302 ----------------RDEGMEETAVVLAQKIDKLRKTPLVDRG 329
RD G + + ID L K +DR
Sbjct: 385 CKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 428
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 140/275 (50%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D LCK V+ A+ V M K PD+ +Y+ L++G+ + V+ M
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV +Y I+IN C K DEA+ LF+EM N P + +LI+GL R+
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP 391
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + RG + TY++++ C + ++ A + ++M+ I PN T+ I+L
Sbjct: 392 YVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILL 451
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR ++A VF+ + K G V TY +++ C ++ A+ + +M+ G
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTK-GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGC 510
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+P + T+I +L +D+ D A K ++M+ G+
Sbjct: 511 IPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 141/302 (46%), Gaps = 3/302 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ LI C ++ A + ++M + +P++ +Y IL++ ++ +
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V M +PDV++Y +++ + +A +F M P H + LING
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + EAL F + ++ P TY++++ C S RI + ++DEMR G +
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPAD 408
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L K G + A ++F +M + P + T+ I++ C ++ A ++
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQE-IRPNIFTFTILLDGLCKGGRLKDAQEVF 467
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL--R 302
++ +G ++ Y+ +IN C + L++A +M D G P F + AL +
Sbjct: 468 QDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 527
Query: 303 DE 304
DE
Sbjct: 528 DE 529
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 136/304 (44%), Gaps = 10/304 (3%)
Query: 3 KFGLKQELPDFNRLIDTLCKS---------RHVERAQEVFDKMKKRRFDPDIKSYTILLE 53
+F + +P+F+ + S ++V+ A F++M R P I + +L+
Sbjct: 8 RFSVSLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILD 67
Query: 54 GWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
+ + K+ + + ++ G +PD+++ I+IN C + + ++ P
Sbjct: 68 SFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPP 127
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
TLI GL + ++ +AL F + +GF+ +Y ++ C A +++
Sbjct: 128 DTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLL 187
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
++ PN Y ++ L K EAY +F M+ K G V TY ++ FC
Sbjct: 188 RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK-GISADVVTYSTLIYGFCI 246
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
++ A+ + +EM + + P ++ Y+ L+++LC E K+ +A ML ++P
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 294 FSNL 297
+S L
Sbjct: 307 YSTL 310
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 107/211 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ + LI+ CK++ V+ A +F +M ++ P I +Y+ L++G +
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ EM+D G DV++Y +I+ C D A+ LF +M+ +P+ F
Sbjct: 390 IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL RL +A + F +G+ TYN ++ +C + +A M+ +M G
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
PN T++ ++ L K ++A + ++M
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K +K ++ ++ L+D V++AQ VF+ M PD+ +YTIL+ G+ + K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM P +V+Y +I+ C + R +L EM + +
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSS 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L A+ F + K + P T+ ++ C R+ DA + ++ G
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N TY+++++ K G EEA ++ +M G P T+E ++ + D A
Sbjct: 475 YHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDN-GCIPNAFTFETIIIALFKKDENDKA 533
Query: 241 MRIWDEMKARGVL 253
++ +M ARG+L
Sbjct: 534 EKLLRQMIARGLL 546
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 2/238 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P ++ + ++++ K Y AV L +E +P LIN +++
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ KRG+ P+ T N ++ C ++ A D++ G N +Y +++ + K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G T A + +++ + T+P V Y ++ C V A ++ EM +G+ +
Sbjct: 177 IGDTRGAIKLLRKIDGRL-TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLA 314
YSTLI C E KL +A EM+ I P ++ L AL EG ++E VLA
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA 293
>gi|259490380|ref|NP_001159198.1| uncharacterized protein LOC100304284 [Zea mays]
gi|223942589|gb|ACN25378.1| unknown [Zea mays]
gi|414865313|tpg|DAA43870.1| TPA: hypothetical protein ZEAMMB73_208601 [Zea mays]
Length = 519
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 159/315 (50%), Gaps = 5/315 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ TLC+ + + A+ VF +K F + ++ ILL GW K+ EM+
Sbjct: 184 FNALLRTLCQEKSMSDARNVFHALKYE-FRVNRHTFNILLSGW---KSAEDAEAFVTEMR 239
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G EPD+V+Y +I+ HC + +A +L EM + P + +LI GLG +
Sbjct: 240 ELGVEPDLVTYNSLIDCHCKNRDVQKAYKLLDEMRHKDISPDIITYTSLIGGLGLIGQPD 299
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + G P+ P YNA + + + R+ DA+ +MD+M G+ PN TY++
Sbjct: 300 KAKDLLKEMYELGCYPDVPAYNAAIRNFVIAKRLGDAFALMDQMVSKGLMPNPTTYNLFF 359
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
A A+ +++RM R G P + ++R+ +V +A+ +W +M +
Sbjct: 360 RCYYWAFDIGSAWRLYERM-RSEGCYPNTQSCMFIIRLCHRYGKVALALELWSDMVSSSF 418
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ + L++ LC E KL+DA + F +M+++G +P F +K ++ EE+
Sbjct: 419 GSLTLVSDVLLDLLCDEGKLEDAERCFCQMVELGQKPSNVAFRRIKILMQLAKQEESIAR 478
Query: 313 LAQKIDKLRKTPLVD 327
L +K+ + + P VD
Sbjct: 479 LTEKMIQFGRLPPVD 493
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 148/297 (49%), Gaps = 2/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + LI + V+ A + D+MK FD DI Y + ++ +G+
Sbjct: 87 MQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGK 146
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK +G PD V+Y M+ C A R DEAVE+F +ME P + + T
Sbjct: 147 VDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNT 206
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G GS + EA + + +G P YN ++ + + A R+ +EM++
Sbjct: 207 MIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA 266
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+I++ L KAG E A+ V M ++ G P V T I++ C ++D A
Sbjct: 267 M-PNLPTYNIIIGMLCKAGNVEAAFKVRDAM-KEAGLFPNVRTINIMIDRLCKAQKLDEA 324
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I++ M + P + +LI+ L + ++DDA + ++ MLD P ++++L
Sbjct: 325 CSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSL 381
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 158/326 (48%), Gaps = 2/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M F + + LI L + +R +F++M++ ++ ++ T L+ + ++
Sbjct: 52 MRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGR 111
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK + F+ D+V Y + I+ + D A + F EM+A P + +
Sbjct: 112 VDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTS 171
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ L RL EA++ F Q ++ P A YN ++ Y + + ++AY +++ R G
Sbjct: 172 MMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 231
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y+ +L L K G+T++A +F+ M R P + TY I++ M C V+ A
Sbjct: 232 CIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA--MPNLPTYNIIIGMLCKAGNVEAA 289
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ D MK G+ P + + +I+ LC KLD+AC F+ M P G F +L
Sbjct: 290 FKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDG 349
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L +G + A + +++ + P V
Sbjct: 350 LGKQGRVDDAYRIYERMLDADQIPNV 375
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 162/349 (46%), Gaps = 37/349 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ L K ++A +F++MK+ P++ +Y I++ + N+ + +V MK
Sbjct: 239 YNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMK 297
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+V + IMI+ C A++ DEA +F M+ C P FC+LI+GLG + R+
Sbjct: 298 EAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVD 357
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG---------- 182
+A + + + P Y +++ + R D ++M EM + G
Sbjct: 358 DAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYM 417
Query: 183 -------------------------PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
P+TR+Y I++H L+KAG E Y ++ M + G
Sbjct: 418 DCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAM-KDQGC 476
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
Y V+ FC + +V+ A ++ +EMK G P + Y ++++ L D+LD+A
Sbjct: 477 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYM 536
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+E GI ++S+L G + A ++ +++ + TP V
Sbjct: 537 LFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNV 585
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 154/324 (47%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + N +ID LCK++ ++ A +F+ M + PD ++ L++G G+Q
Sbjct: 296 MKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGR 355
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +Y M D P+VV Y +I R ++ ++++EM + C P + T
Sbjct: 356 VDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNT 415
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + + F + K RGF P+ +Y+ ++ + + + Y + M+ G
Sbjct: 416 YMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQG 475
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+TR Y+ V+ K+G+ +AY + + M + G PTV TY VV ++D A
Sbjct: 476 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM-KTMGHHPTVVTYGSVVDGLAKIDRLDEA 534
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++E K+ G+ +YS+LI+ ++D+A +EM+ G+ P ++ L
Sbjct: 535 YMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDG 594
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L A+V Q + L+ TP
Sbjct: 595 LVKAEEINEALVCFQSMKDLKCTP 618
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 147/309 (47%), Gaps = 5/309 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD ++ LI +L K+ E++ MK + D ++Y +++G+ + + +
Sbjct: 442 LPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 501
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EMK G P VV+YG +++ R DEA LF E ++ + + I+ +LI+G G
Sbjct: 502 LLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFG 561
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA + ++G P T+N ++ + IN+A M+ PN
Sbjct: 562 KVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQI 621
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I+++ L K + +A+ ++ M +K G +P TY ++ + V A +++
Sbjct: 622 TYCILINGLCKVRKFNKAFVFWQEM-QKQGLKPNTITYTAMISGLAKSGNVAQASSLFER 680
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEG 305
+A G +P Y+ +I L ++ DA + F+E G + L AL + E
Sbjct: 681 FRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAEC 740
Query: 306 MEETAVVLA 314
+E+ A+V A
Sbjct: 741 LEQAAIVGA 749
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 104/209 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + ++D L K ++ A +F++ K + + Y+ L++G+G+
Sbjct: 506 MKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGR 565
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V EM G P+V ++ +++ A+ +EA+ F+ M+ C P+ +C
Sbjct: 566 VDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCI 625
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL ++ ++A F+ + +K+G +P TY A++ S + A + + R G
Sbjct: 626 LINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASG 685
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
P++ +Y+ ++ L A R +AY +F+
Sbjct: 686 GIPDSASYNAMIEGLSIANRALDAYQLFE 714
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 115/263 (43%), Gaps = 1/263 (0%)
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+ +N + ++ EM GF P + ++ + +++ EA +L + M +P+
Sbjct: 3 RTRNFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFS 62
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ TLI L L F Q ++ G+E ++ + R++ A ++DEM
Sbjct: 63 AYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEM 122
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ + Y++ + K G+ + A+ F M + G P TY ++ + C +
Sbjct: 123 KSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEM-KANGLVPDDVTYTSMMGVLCKANR 181
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+D A+ I+++M+ +P + Y+T+I K D+A + G P ++
Sbjct: 182 LDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNC 241
Query: 297 LKQALRDEGMEETAVVLAQKIDK 319
+ L +G + A+ + +++ +
Sbjct: 242 ILTCLGKKGKTDKALRIFEEMKR 264
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q G+ GF P T +V + S ++ +A+ ++ MR P Y ++ L
Sbjct: 12 QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ G ++ ++F +M ++ G E V ++R+F +VD A+ + DEMK+
Sbjct: 72 SEVGESDRMLALFNQM-QELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDAD 130
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ +Y+ I+ K+D A K+F EM G+ P ++++ L + AV + +
Sbjct: 131 IVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFE 190
Query: 316 KIDKLRKTP 324
++++ R+ P
Sbjct: 191 QMEQNRQVP 199
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N L+D L K+ + A F MK + P+ +Y IL+ G + +
Sbjct: 580 GLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKA 639
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++EM+ G +P+ ++Y MI+ + +A LF A+ P + +I G
Sbjct: 640 FVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEG 699
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
L R +A Q F +++ +G T A++ A
Sbjct: 700 LSIANRALDAYQLFEETRLKGCSIHTKTCVALLDA 734
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GLK + +I L KS +V +A +F++ + PD SY ++EG
Sbjct: 646 MQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANR 705
Query: 61 LLSMNEVYREMKDDG 75
L +++ E + G
Sbjct: 706 ALDAYQLFEETRLKG 720
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 153/314 (48%), Gaps = 5/314 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + LI K HV A + FD+M ++ PD +YT L++G+GQ ++
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ EM G +PD V+Y +I+ +C A A L EM P+ + LI+GL
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
L A + + +K+G + YN++V C + I A ++M EM GI P+
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY V+ + G ++A+ + + M + G +PTV T+ +++ FC ++ R+
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDR-GLQPTVVTFNVLMNGFCMLGMLEDGDRLLGW 598
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-KQALRDEG 305
M +G++P Y+TL+ C + ++ K ++ M + G+ P ++ L K +
Sbjct: 599 MLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARN 658
Query: 306 MEETAVVLAQKIDK 319
++E + + I+K
Sbjct: 659 LKEAWFLYKEMIEK 672
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 2/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +N +I LCK A++V +M ++ PD YT L+ G+ + ++ +
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTA 382
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N+ + EM PD ++Y +I + E LF EM + KP + TLI+
Sbjct: 383 NKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDV 442
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ A + + G P TY A++ C ++ A ++DEMRK G+ N
Sbjct: 443 YCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLN 502
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ +++ + KAG E+A + K M G +P TY V+ +C +D A ++
Sbjct: 503 VCIYNSMVNGICKAGNIEQAIKLMKEM-EVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-KQALRD 303
EM RG+ P + ++ L+N C L+D + ML+ GI P ++ L KQ
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621
Query: 304 EGMEETA 310
M T
Sbjct: 622 NSMNTTT 628
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 147/309 (47%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + + LID CK+ + A + ++M + P+I +Y L++G + L +
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
NE+ EM+ G + +V Y M+N C A ++A++L +EME P + T+I+
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A + + RG +P T+N ++ +C + D R++ M + GI P+
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ ++KRM R G P +TY I+++ C + A ++
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRM-RNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM +G +P + Y+ LI + K +A + F+EM G+ G++++ +E
Sbjct: 667 KEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEE 726
Query: 305 GMEETAVVL 313
G E + L
Sbjct: 727 GDVEITLNL 735
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 149/341 (43%), Gaps = 36/341 (10%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQK 59
++G+ +N +I +LC+ V+ A + +M R PD+ SY+ +++G+ G+ K
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 60 NLLSM--------------------------------NEVYREMKDDGFEPDVVSYGIMI 87
L + +V REM PD V Y +I
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 88 NAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
+ A + F EM + P + TLI G G ++ E F + RG +
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P+ TY ++ YC + + +A+ + +EM + G+ PN TY ++ L K G + A +
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
M RK G + V Y +V C ++ A+++ EM+ G+ P Y+T+I++ C
Sbjct: 491 LDEM-RKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+D A K QEMLD G++P F+ L GM E
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 144/270 (53%), Gaps = 2/270 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + LID LCK ++ A E+ D+M+K+ ++ Y ++ G + N
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +EM+ G +PD ++Y +I+A+C D+A +L +EM +P+ F
Sbjct: 519 IEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNV 578
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG L + + G ++G P+A TYN ++ +C +N ++ MR G
Sbjct: 579 LMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQG 638
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P++ TY+I++ KA +EA+ ++K M K G PTV++Y +++ F + A
Sbjct: 639 VAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEK-GYVPTVTSYNALIKRFYKKRKFXEA 697
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED 270
+++EM+ G++ +Y+ ++ +C+E+
Sbjct: 698 RELFEEMRGHGLVADGEIYNFFVD-MCYEE 726
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 91/202 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + + +ID C+ +++A ++ +M R P + ++ +L+ G+
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + M + G PD ++Y ++ HC + ++++ M P + +
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNI 648
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + L EA + + ++G+ P +YNA++ + + +A + +EMR G
Sbjct: 649 LIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHG 708
Query: 181 IGPNTRTYDIVLHHLIKAGRTE 202
+ + Y+ + + G E
Sbjct: 709 LVADGEIYNFFVDMCYEEGDVE 730
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 14/255 (5%)
Query: 80 VVSYGIMI-----NAHCS-----AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
++SYG+++ NA S ++ + A+++F E + S +I + LG
Sbjct: 216 LLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLG--- 272
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ EA + Q R P+ +Y+ V+ YC + A ++MD+M+ G+ PN TY+
Sbjct: 273 KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYN 332
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ L K G++ EA V + M + P Y ++ F V A + +DEM +
Sbjct: 333 SIILLLCKIGKSFEAEKVLREMMSQK-IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLS 391
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+ + P Y+TLI K+ + F EM+ G++P ++ L G
Sbjct: 392 KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVN 451
Query: 310 AVVLAQKIDKLRKTP 324
A L ++ ++ TP
Sbjct: 452 AFSLHNEMVQMGMTP 466
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 5/199 (2%)
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW-SMRINDAYR 171
P+P F L LSEA + + G + NA + S I A +
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ E GI NT +Y+I+++ L + G+ +EA+ + +M + T P V +Y V+ +
Sbjct: 248 VFCEY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSST-PDVVSYSTVIDGY 303
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C+ ++ A+++ D+M+ +G+ P + Y+++I LC K +A K +EM+ I P
Sbjct: 304 CHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDN 363
Query: 292 QLFSNLKQALRDEGMEETA 310
+++ L G TA
Sbjct: 364 VVYTTLIHGFFKLGHVRTA 382
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 32/140 (22%)
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRM--------------------SRKPGTEPTV 221
GPN +DI L++ G EA + ++ + G E +
Sbjct: 187 GPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAI 246
Query: 222 ------------STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
++Y I++ C +V A R+ +M R P + YST+I+ CH
Sbjct: 247 KVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHL 306
Query: 270 DKLDDACKYFQEMLDIGIRP 289
+L A K +M G++P
Sbjct: 307 GELKKALKLMDDMQIKGLKP 326
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 154/320 (48%), Gaps = 2/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQK 59
M + G K + LID LCK E+A +F K+ + + P++ +YT ++ G+ ++
Sbjct: 336 MVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKED 395
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L ++ MK+ G P+V +Y +IN HC A +D A EL M+ +P+ + +
Sbjct: 396 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYN 455
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I+ L + R EA + ++ G E + TY ++ C I A M K
Sbjct: 456 AVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKT 515
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G + R +I++ + + +E+ +F+ + G PT TY ++ +C D+
Sbjct: 516 GFEADMRLNNILIAAFCRQKKMKESERLFQ-LVVSLGLVPTKETYTSMISGYCKEGDFDL 574
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A++ + MK G +P Y +LI+ LC + +D+ACK ++ M+D G+ PP L
Sbjct: 575 ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAY 634
Query: 300 ALRDEGMEETAVVLAQKIDK 319
+A+++ + +DK
Sbjct: 635 EYCKRNDSASAMIVLEPLDK 654
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 2/300 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL N +++ +S ++ A+ VFD+M R PD S+ +++ G +
Sbjct: 196 MQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGK 255
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M GF PD + ++++A C + A+ FR+M KP+ F +
Sbjct: 256 IQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 315
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + + +A + + + G++P T+ A++ C A+R+ ++ +
Sbjct: 316 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSD 375
Query: 181 I-GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I PN TY ++ K + A +F RM ++ G P V+TY ++ C D
Sbjct: 376 IYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM-KEQGLFPNVNTYTTLINGHCKAGNFDR 434
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + + M G P ++ Y+ +I+SLC + + +A + + G+ G ++ L Q
Sbjct: 435 AYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 494
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 141/348 (40%), Gaps = 39/348 (11%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + + +I CK + RA+ +F +MK++ P++ +YT L+ G + N E
Sbjct: 378 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYE 437
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M D+GF P++ +Y +I++ C R EA EL + + + + LI
Sbjct: 438 LMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 497
Query: 127 SEKRLSEALQFFGQSKKRGFE-----------------------------------PEAP 151
+ + +AL FF + K GFE P
Sbjct: 498 KQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKE 557
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
TY +++ YC + A + M++ G P++ TY ++ L K +EA +++ M
Sbjct: 558 TYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 617
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ + P V+ + +C AM + + + + + + TL+ LC E K
Sbjct: 618 IDRGLSPPEVTRVTLAYE-YCKRNDSASAMIVLEPLDKKLWIRTVR---TLVRKLCSEKK 673
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ A +FQ++L+ + A + G L ++I +
Sbjct: 674 VGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNNLVADLTERISR 721
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 35/255 (13%)
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M++ G P ++ ++ + D A +F EM P F ++ G +
Sbjct: 195 DMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDG 254
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC---------WSMR--------------- 165
++ EA ++ +RGF P+ T ++ A C W R
Sbjct: 255 KIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFT 314
Query: 166 -----------INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
I A+ M++EM + G PN T+ ++ L K G TE+A+ +F ++ R
Sbjct: 315 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 374
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
+P V TY ++ +C +++ A ++ MK +G+ P ++ Y+TLIN C D
Sbjct: 375 DIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDR 434
Query: 275 ACKYFQEMLDIGIRP 289
A + M D G RP
Sbjct: 435 AYELMNLMDDEGFRP 449
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 4/247 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G + + +N +ID+LCK A E+ +K + D +YTIL++ +Q +
Sbjct: 442 MDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSD 501
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M GFE D+ I+I A C K+ E+ LF+ + + P+ + +
Sbjct: 502 IKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTS 561
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G E AL++F K+ G P++ TY +++ C +++A ++ + M G
Sbjct: 562 MISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 621
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P T + + K + A V + + +K + T +VR C +V +A
Sbjct: 622 LSPPEVTRVTLAYEYCKRNDSASAMIVLEPLDKKLW----IRTVRTLVRKLCSEKKVGVA 677
Query: 241 MRIWDEM 247
+ ++
Sbjct: 678 ALFFQKL 684
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
RL+EA+ + +G P + T N V+ S I+ A + DEM G+ P++ ++
Sbjct: 185 RLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFK 244
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ + G+ +EA M ++ G P +T +++ C N V+ A+ + +M
Sbjct: 245 LMVIGCFRDGKIQEADRWLSGMIQR-GFIPDNATCTLILSALCENGLVNRAIWYFRKMID 303
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G P + +++LI+ LC + + A + +EM+ G +P + L L G E
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 363
Query: 310 AVVLAQKI 317
A L K+
Sbjct: 364 AFRLFLKL 371
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L + + GR EA + M + G P+ T V+ + + +D A ++DEM R
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQ-GLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVR 234
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
GV P + ++ + K+ +A ++ M+ G P + + AL + G+ A
Sbjct: 235 GVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRA 294
Query: 311 VVLAQKIDKLRKTP 324
+ +K+ L P
Sbjct: 295 IWYFRKMIDLGFKP 308
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 150/308 (48%), Gaps = 2/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + F L+ + ++ A + D+MK F D+ Y + ++ +G+
Sbjct: 229 MQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGK 288
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK G PD V+Y +I C A+R DEAVELF E++ P + + T
Sbjct: 289 VDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNT 348
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G GS + EA + K++G P YN ++ ++ +A R+ DEMR+
Sbjct: 349 MIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-D 407
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+I++ L KAG E A V M ++ G P + T I++ C ++D A
Sbjct: 408 AAPNLTTYNILIDMLCKAGELEAALKVQDTM-KEAGLFPNIMTVNIMIDRLCKAQKLDEA 466
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I+ + + P + +LI+ L ++DDA +++MLD P ++++L Q
Sbjct: 467 CSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQN 526
Query: 301 LRDEGMEE 308
G +E
Sbjct: 527 FFKCGRKE 534
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 154/326 (47%), Gaps = 2/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KF + + LI L + + +F +M++ ++ ++ +T L+ + ++
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGR 253
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK + F D+V Y + I+ + D A + F EM+A P + T
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L +RL EA++ F + P YN ++ Y + + ++AY +++ ++ G
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y+ +L L + G+ EEA + M + P ++TY I++ M C +++ A
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA--PNLTTYNILIDMLCKAGELEAA 431
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ D MK G+ P + + +I+ LC KLD+AC F + P + F +L
Sbjct: 432 LKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDG 491
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L G + A L +K+ + P V
Sbjct: 492 LGRRGRVDDAYSLYEKMLDSDQIPNV 517
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 157/315 (49%), Gaps = 1/315 (0%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L +N LID LCK+ +E A +V D MK+ P+I + I+++ + + L ++
Sbjct: 412 LTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFL 471
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+ PD ++ +I+ R D+A L+ +M ++ P+ ++ +LI
Sbjct: 472 GLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCG 531
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R + + + + RG P+ N+ + + + + +E++ G+ P+ R+Y
Sbjct: 532 RKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYS 591
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I++H L+KAG + E Y +F M ++ G V Y V+ FC + +VD A ++ +EMK
Sbjct: 592 ILIHGLVKAGFSRETYKLFYEM-KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT 650
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G+ P + Y ++++ L D+LD+A F+E IG+ ++S+L G +
Sbjct: 651 KGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDE 710
Query: 310 AVVLAQKIDKLRKTP 324
A ++ +++ + TP
Sbjct: 711 AYLILEELMQKGLTP 725
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 144/289 (49%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F LID L + V+ A +++KM P++ YT L++ + + +++Y+EM
Sbjct: 485 FCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMV 544
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD++ ++ A ++ LF E++A P + LI+GL
Sbjct: 545 HRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSR 604
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + F + K++G + YN V+ +C S +++ AY++++EM+ G+ P TY V+
Sbjct: 605 ETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVV 664
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K R +EAY +F+ ++ G + V Y ++ F ++D A I +E+ +G+
Sbjct: 665 DGLAKIDRLDEAYMLFEE-AKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 723
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + ++ L+++L +++D+A FQ M ++ P +S + L
Sbjct: 724 TPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGL 772
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 156/359 (43%), Gaps = 36/359 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW--------- 55
G +L N +D + K+ VE+ + +F+++K + PD++SY+IL+ G
Sbjct: 547 GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRET 606
Query: 56 ----------GQQKNLLSMNEV----------------YREMKDDGFEPDVVSYGIMINA 89
G ++L+ N V EMK G +P VV+YG +++
Sbjct: 607 YKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDG 666
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
R DEA LF E ++ + I+ +LI+G G R+ EA + ++G P
Sbjct: 667 LAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 726
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+ T+N ++ A + I++A M+ PN TY I+++ L + +A+ ++
Sbjct: 727 SYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQ 786
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M +K G +P TY ++ V A ++D KA G +P Y+ +I L
Sbjct: 787 EM-QKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSA 845
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVDR 328
+K DA F+E G R + L AL E A ++ + ++ K+ R
Sbjct: 846 NKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQHATR 904
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 1/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ +N +ID CKS V++A ++ ++MK + P + +Y +++G +
Sbjct: 613 MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDR 672
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E K G + +VV Y +I+ R DEA + E+ P+ + +
Sbjct: 673 LDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNC 732
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + + EA F K P A TY+ ++ C + N A+ EM+K G
Sbjct: 733 LLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQG 792
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ L KAG EA +F R + G P + Y ++ + A
Sbjct: 793 LKPNNITYTTMIAGLAKAGNVMEARGLFDRF-KASGGVPDSACYNAMIEGLSSANKAMDA 851
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+++E + +G L+++L D L+ A
Sbjct: 852 YIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 53/333 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ L + VE A + D+M++ P++ +Y IL++ + L + +V MK
Sbjct: 381 YNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMK 439
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P++++ IMI+ C A++ DEA +F ++ C P FC+LI+GLG
Sbjct: 440 EAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG------ 493
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+RG R++DAY + ++M PN Y ++
Sbjct: 494 ----------RRG-------------------RVDDAYSLYEKMLDSDQIPNVVVYTSLI 524
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K GR E+ + ++K M + G P + + +V+ +++E+KA+G+
Sbjct: 525 QNFFKCGRKEDGHKIYKEMVHR-GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGL 583
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM------LDI--------GIRPPGQL--FSN 296
+P + YS LI+ L + K F EM LD+ G G++
Sbjct: 584 VPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQ 643
Query: 297 LKQALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
L + ++ +G++ T V +D L K +D
Sbjct: 644 LLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEA 676
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 114/255 (44%), Gaps = 7/255 (2%)
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFCTLINGLGSEKRL 131
D+ +P+V+ G+M K + A + FR +E T P ++ + + + L
Sbjct: 95 DEMSQPEVI-VGVMKRL----KDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNL 149
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
Q + GF +V ++ S ++ +A+ +++ MRK P Y +
Sbjct: 150 DYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTL 209
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L A R + ++F +M ++ G E V + +VR+F ++D A+ + DEMK+
Sbjct: 210 IGALSAANRPDPMLTLFHQM-QEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNS 268
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ +Y+ I+ K+D A K+F EM G+ P ++ L L + AV
Sbjct: 269 FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAV 328
Query: 312 VLAQKIDKLRKTPLV 326
L +++D R P V
Sbjct: 329 ELFEELDLNRSVPCV 343
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 153/303 (50%), Gaps = 1/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ L +N +++ LCK + A +VFD+M++R +I +Y L+ G ++
Sbjct: 259 MQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
NEV +MK DG P++++Y +I+ C ++ +A+ L R++++ PS +
Sbjct: 319 ANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + S A + + ++RG +P TY ++ + S + A ++ M + G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +++H GR EA +FK M K EP Y +V +C A
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK-FEPNEVIYNTMVLGYCKEGSSYRA 497
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R++ EM+ + + P + Y +I LC E K +A ++M+D GI P + + + +A
Sbjct: 498 LRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557
Query: 301 LRD 303
D
Sbjct: 558 KND 560
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 164/326 (50%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +FG + + LID CK +E+A+++F +M K + +YT+L+ G +
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y +M++ G P++ +Y ++N C R +A ++F EM + + T
Sbjct: 249 KKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNT 308
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL E + +EA + Q K G P TYN ++ +C ++ A + +++ G
Sbjct: 309 LIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRG 368
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+I++ K G T A V K M + G +P+ TY I++ F + ++ A
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER-GIKPSKVTYTILIDTFARSDNMEKA 427
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M+ G+ P +H YS LI+ C + ++++A + F+ M++ P +++ +
Sbjct: 428 IQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLG 487
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
EG A+ L +++++ P V
Sbjct: 488 YCKEGSSYRALRLFREMEEKELPPNV 513
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 153/309 (49%), Gaps = 2/309 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
F +I C++ +E++ ++ ++++ F P++ YT L++G ++ + +++ EM
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G + +Y ++I+ + E++ +M+ P+ H + ++N L + R
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRT 284
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A + F + ++RG TYN ++G C M+ N+A +MD+M+ GI PN TY+ +
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTL 344
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ + +A S+ + + + G P++ TY I+V FC A ++ EM+ RG
Sbjct: 345 IDGFCGVRKLGKALSLCRDLKSR-GLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETA 310
+ P Y+ LI++ D ++ A + M ++G+ P +S L +G M E +
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEAS 463
Query: 311 VVLAQKIDK 319
+ ++K
Sbjct: 464 RLFKSMVEK 472
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 150/312 (48%), Gaps = 2/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ + S + F++ K + D+ S+ I+++G + + ++ E++
Sbjct: 132 FNNLLTFVVGSSSFNQWWCFFNE-SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELR 190
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF P+VV Y +I+ C ++A +LF EM + + LI+GL
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + + + ++ G P TYN V+ C R DA+++ DEMR+ G+ N TY+ ++
Sbjct: 251 QGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLI 310
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + + EA V +M + G P + TY ++ FC ++ A+ + ++K+RG+
Sbjct: 311 GGLCREMKANEANEVMDQM-KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGL 369
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ L++ C + A K +EM + GI+P ++ L E A+
Sbjct: 370 SPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 313 LAQKIDKLRKTP 324
L +++L TP
Sbjct: 430 LRSSMEELGLTP 441
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 153/317 (48%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KFGL + LI L K+ ++ E+++KM++ P++ +Y ++ +
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGR 283
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+V+ EM++ G ++V+Y +I C + +EA E+ +M++ P+ + T
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++L +AL K RG P TYN +V +C + A +++ EM + G
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY I++ ++ E+A + M + G P V TY +++ FC +++ A
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSM-EELGLTPDVHTYSVLIHGFCIKGRMNEA 462
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ M + P +Y+T++ C E A + F+EM + + P + + +
Sbjct: 463 SRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEV 522
Query: 301 LRDEGMEETAVVLAQKI 317
L E + A L +K+
Sbjct: 523 LCKERKSKEAEGLVEKM 539
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 35/241 (14%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y ++INA+ ++ D ++ F EM P + F L+ + ++ FF +SK
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 143 KR----------------------------------GFEPEAPTYNAVVGAYCWSMRIND 168
+ GF P Y ++ C I
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A + EM K G+ N TY +++H L K G ++ + ++++M ++ G P + TY V+
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM-QEHGVFPNLHTYNCVM 275
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C + + A +++DEM+ RGV + Y+TLI LC E K ++A + +M GI
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335
Query: 289 P 289
P
Sbjct: 336 P 336
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 35/236 (14%)
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ ++ + + L E+ K ++ +IN + L ++ +F + +G
Sbjct: 65 VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124
Query: 146 FEPEAPTYN----------------------------------AVVGAYCWSMRINDAYR 171
F P + +N V+ C + I ++
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFD 184
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
++ E+R+ G PN Y ++ K G E+A +F M K G TY +++
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG-KFGLVANEWTYTVLIHGL 243
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
N ++++M+ GV P +H Y+ ++N LC + + DA K F EM + G+
Sbjct: 244 FKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGV 299
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 150/335 (44%), Gaps = 34/335 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + F LID C+ + RAQE+FD+M+ + P + YTIL+ G +
Sbjct: 177 GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEA 236
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++R M++ G P+V +Y +++ +C +A+ L+++M P F LI+G
Sbjct: 237 ESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDG 296
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + A F K P YN+++ AYC +++A + E+ + + P+
Sbjct: 297 LCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPD 356
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP----------------------------- 215
TY I++ L RTEEA ++F++M+++
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICS 416
Query: 216 -----GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
G EP V T+ ++ +C + AM I+ EM + + P + Y+ +I+ C
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYG 476
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ +A K + +MLD GI P S L L +G
Sbjct: 477 SMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDG 511
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 137/295 (46%), Gaps = 1/295 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + N L+ L K+ E ++++M P + ++ L++G +Q +LL
Sbjct: 140 KVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLL 199
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E++ EM+ G P V+ Y I+I CS + +EA + R M P+ + + TL+
Sbjct: 200 RAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLM 259
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +AL+ + G P+ T+ ++ C + A + M K +
Sbjct: 260 DGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVT 319
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN Y+ ++ K G EA ++F + R P V TY I++R C ++ + A
Sbjct: 320 PNIAVYNSLIDAYCKVGDVSEAMALFLELERFE-VSPDVFTYSILIRGLCSVSRTEEAGN 378
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I+++M G+L Y++LI+ C E K+D A + +M + G+ P FS L
Sbjct: 379 IFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTL 433
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 133/284 (46%), Gaps = 1/284 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N L+D CK + ++A ++ M PD+ ++ IL++G +
Sbjct: 243 MREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGE 302
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ M P++ Y +I+A+C EA+ LF E+E P +
Sbjct: 303 MKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSI 362
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL S R EA F + K G + TYN+++ C +++ A + +M + G
Sbjct: 363 LIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENG 422
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T+ ++ K + A ++ M K P V TY ++ C + A
Sbjct: 423 VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIK-SLSPDVVTYTAMIDGHCKYGSMKEA 481
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++++ +M G+ P + S L++ LC + K+ DA + F E ++
Sbjct: 482 LKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIE 525
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 148/322 (45%), Gaps = 14/322 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KF + + +N LID CK V A +F ++++ PD+ +Y+IL+ G
Sbjct: 313 MIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSR 372
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +M +G + V+Y +I+ C + D+A+E+ +M +P+ F T
Sbjct: 373 TEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFST 432
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + L A+ + + + P+ TY A++ +C + +A ++ +M G
Sbjct: 433 LIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNG 492
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVF--KRMSRKP-------GTEPTVS---TYEIVV 228
I PN T +L L K G+ +A +F K + P G++P+++ Y ++
Sbjct: 493 ITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALI 552
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C + Q A++++ +M+ G+ P +Y ++ L + +ML G+
Sbjct: 553 HGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVI 610
Query: 289 PPGQLFSNLKQALRDEGMEETA 310
P + L + ++ G ++A
Sbjct: 611 PNSAVHVILCECYQESGFLKSA 632
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 14/298 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ F LID LCK ++ A+ +F M K P+I Y L++ + + ++
Sbjct: 282 GLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEA 341
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ E++ PDV +Y I+I CS R +EA +F +M + + +LI+G
Sbjct: 342 MALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDG 401
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E ++ +AL+ Q + G EP T++ ++ YC + A + EM + P+
Sbjct: 402 CCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPD 461
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ K G +EA ++ M G P T ++ C + ++ A+ ++
Sbjct: 462 VVTYTAMIDGHCKYGSMKEALKLYSDMLDN-GITPNCYTISCLLDGLCKDGKISDALELF 520
Query: 245 DE----------MKARGVLPVM--HM-YSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
E + A G P + H+ Y+ LI+ LC + + A K F +M G++P
Sbjct: 521 TEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQP 578
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 7/263 (2%)
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L+ +E+ R +K F P+V YG +I C + +EA+ ++ ++ A + ++ +
Sbjct: 100 LAFSELSR-LKSSKFTPNV--YGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYV 156
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+ G R + + + G P T+ ++ C + A M DEMR GI
Sbjct: 157 LVKTG---RFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGI 213
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P Y I++ L + EEA S+ + M R+ G P V TY ++ +C A A+
Sbjct: 214 VPTVIVYTILIRGLCSDNKIEEAESMHRAM-REVGVYPNVYTYNTLMDGYCKLANAKQAL 272
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R++ +M G++P + + LI+ LC ++ A F M+ + P ++++L A
Sbjct: 273 RLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAY 332
Query: 302 RDEGMEETAVVLAQKIDKLRKTP 324
G A+ L ++++ +P
Sbjct: 333 CKVGDVSEAMALFLELERFEVSP 355
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 150/324 (46%), Gaps = 6/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + ++ +LCK+ ++ A+E+ RF P + Y L++G ++
Sbjct: 205 MSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNALIDGMCKEGR 259
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM D+G +P+VVSY +IN+ C + + A LF +M C + H F
Sbjct: 260 IEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTP 319
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G +L EAL + + G EP YN ++ C + + +A ++ D+M++ G
Sbjct: 320 LIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSG 379
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY I++ K+G A + RM G P V TY +V + C N+ D A
Sbjct: 380 CLPNVTTYSILIDGFAKSGDLVGASETWNRMISH-GCRPNVVTYTCMVDVLCKNSMFDQA 438
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++M G P ++T I LC +++ A K + M G P ++ L A
Sbjct: 439 NSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDA 498
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L E A L Q+I+ P
Sbjct: 499 LFRMNKYEEAFGLFQEIEARNLQP 522
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 156/324 (48%), Gaps = 6/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +FG K + +N L+D L + ++ MKK P++ +Y ILL+ +
Sbjct: 135 IGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDR 194
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++++ EM + G PD V+Y M+++ C A + D+A EL A KPS ++
Sbjct: 195 VDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNA 249
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ E R+ A++ G+ G +P +Y+ ++ + C S + A+ + +M G
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N T+ ++ G+ EA ++K M + G EP V Y ++ C N ++ A
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD-GCEPNVVAYNTLIHGLCSNGSLEEA 368
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ D+M+ G LP + YS LI+ L A + + M+ G RP ++ +
Sbjct: 369 LQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L M + A L +K+ TP
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTP 452
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 150/301 (49%), Gaps = 2/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N LI LC + +E A +V D+M++ P++ +Y+IL++G+ + +L+
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+E + M G P+VV+Y M++ C +D+A L +M C P+ F T I G
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKG 463
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ A++ + + G P TYN ++ A + +A+ + E+ + PN
Sbjct: 464 LCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPN 523
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ VL+ +AG EA +F + + GT P TY ++ +C +V +A ++
Sbjct: 524 LVTYNTVLYGFSRAGMMGEALQLFGKALVR-GTAPDSITYNTMIHAYCKQGKVKIAAQLV 582
Query: 245 DEMKA-RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ + + + P + Y++LI C+ +++A + + ++ GI P ++ L + D
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFD 642
Query: 304 E 304
Sbjct: 643 S 643
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 162/319 (50%), Gaps = 3/319 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ +I++LC S +VE A +F +M R D +I ++T L++G + L
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++ M DG EP+VV+Y +I+ CS +EA+++ +M+ + C P+ + LI+G
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A + + + G P TY +V C + + A ++++M G PN
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-EIVVRMFCYNAQVDMAMRI 243
T T++ + L GR E A + +RM + G P ++TY E++ +F N + + A +
Sbjct: 454 TITFNTFIKGLCGNGRVEWAMKLLERM-QGHGCLPNITTYNELLDALFRMN-KYEEAFGL 511
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ E++AR + P + Y+T++ + +A + F + L G P ++ + A
Sbjct: 512 FQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCK 571
Query: 304 EGMEETAVVLAQKIDKLRK 322
+G + A L +++ +++
Sbjct: 572 QGKVKIAAQLVERVSSMKE 590
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 133/278 (47%), Gaps = 7/278 (2%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMN 65
KQ+L + ++ L R++ F + F +Y +++E G++ + +
Sbjct: 35 KQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQ 94
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ ++MK DG + +IN + ++A+++F + CKP+ I+ L++ L
Sbjct: 95 YILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDAL 154
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
SE + + KK G P TYN ++ A C + R++ A+++ EM G P+
Sbjct: 155 LSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDA 214
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY ++ L KAG+ ++A + R +P+V Y ++ C ++++A+++
Sbjct: 215 VTYTTMVSSLCKAGKIDDARELAGRF------KPSVPVYNALIDGMCKEGRIEVAIKLLG 268
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
EM GV P + YS +INSLC ++ A F +M
Sbjct: 269 EMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMF 306
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 1/181 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + +N L+D L + E A +F +++ R P++ +Y +L G+ +
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFC 119
+ +++ + G PD ++Y MI+A+C + A +L + + P +
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI G + + EA+ F ++ +G P T+NA+V + S+ ++D++ +
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRK 659
Query: 180 G 180
G
Sbjct: 660 G 660
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 47/114 (41%)
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
VL L F ++ + T STY +++ ++DM I +MK
Sbjct: 44 VLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMD 103
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
G+ ++ +IN + A K F + + G +P +++++L AL E
Sbjct: 104 GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSE 157
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 144/301 (47%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L N LI LCK+ +++ A + KM +R F D +Y L+ G ++ +
Sbjct: 486 GFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 545
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G EPD +Y ++I+ C + DEAV L+ E ++ + P+ + + +I+G
Sbjct: 546 FKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDG 605
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ E + F + + E + YN ++ AYC + +A+++ D+MR GI P
Sbjct: 606 YCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPT 665
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY ++H + GR E+A + M RK G P V Y ++ +C Q+D + +
Sbjct: 666 TATYSSLIHGMCNIGRMEDAKCLIDEM-RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 724
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM + + P Y+ +I+ + A K EM+ GI P ++ L E
Sbjct: 725 QEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKE 784
Query: 305 G 305
G
Sbjct: 785 G 785
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 150/369 (40%), Gaps = 69/369 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G+ + +N LI LCK +++ A +KM K + + +Y++L+ G + +
Sbjct: 272 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEK 331
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP------- 113
N V +E + GF P+ V Y +I+ +C +A+ + +M + P
Sbjct: 332 FNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNS 391
Query: 114 ----------------------------SPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+P F T+I+ L R AL+F + R
Sbjct: 392 IIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRN 451
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P +VG C + +DA + + + G G N T + ++H L K G +EA
Sbjct: 452 MRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAV 511
Query: 206 SVFKRMSR----------------------------------KPGTEPTVSTYEIVVRMF 231
+ K+M K G EP TY +++
Sbjct: 512 RLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGM 571
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C ++D A+ +W+E K+R ++P ++ Y +I+ C DK+++ K F E+L +
Sbjct: 572 CRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNS 631
Query: 292 QLFSNLKQA 300
+++ L +A
Sbjct: 632 VVYNTLIRA 640
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 139/302 (46%), Gaps = 1/302 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ LCK A E++ ++ ++ F ++ + L+ G + N+ + ++M + G
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F D ++Y +I+ C + +E +L EM +P + LI+G+ +L EA+
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + K R P TY ++ YC + +I + ++ E+ + N+ Y+ ++
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ G T EA+ + M R G PT +TY ++ C +++ A + DEM+ G+LP
Sbjct: 642 CRNGNTVEAFKLHDDM-RSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPN 700
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ Y+ LI C ++D QEM I P ++ + G +TA L
Sbjct: 701 VVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLH 760
Query: 316 KI 317
++
Sbjct: 761 EM 762
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 2/285 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A VF + + P +K+ T LL + L V+ M+ G PDV + IN
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAIN 254
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
A C + ++A++LF +ME P+ + LI+GL L EA +F + K G
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TY+ ++ + N+A ++ E + G PN Y+ ++ K G +A +
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K G P T +++ FC Q++ A I +EM +RG ++T+I+ LC
Sbjct: 375 GDMVSK-GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 433
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ + A ++ +EML +RP L + L L EG AV L
Sbjct: 434 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 478
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 131/266 (49%), Gaps = 3/266 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ + +N LI +C+ ++ A ++++ K R P++ +Y ++++G+ +
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ E+ E + V Y +I A+C EA +L +M + P+ + +
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ + R+ +A + +K G P Y A++G YC +++ ++ EM
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY +++ K+G + A + M K G P TY ++ FC +++
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK-GIVPDTVTYNVLTNGFCKEGKIEEG 790
Query: 241 MRIWDEMKARGVLPVMHM-YSTLINS 265
+I D M G LP+ + Y+TL++
Sbjct: 791 FKICDYMSQEG-LPLDEITYTTLVHG 815
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 133/304 (43%), Gaps = 1/304 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ F+ I+ CK VE A ++F M+K P++ +Y L+ G + NL
Sbjct: 241 GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEA 300
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+M DG +++Y ++IN ++++EA + +E P+ ++ TLI+G
Sbjct: 301 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDG 360
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +AL+ G +G P + T N+++ +C ++ A +++EM G N
Sbjct: 361 YCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSIN 420
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ ++H L R E A + M + P +V C + A+ +W
Sbjct: 421 PGAFTTIIHWLCMNSRFESALRFLREMLLR-NMRPNDGLLTTLVGGLCKEGKHSDAVELW 479
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ +G + + LI+ LC + +A + ++ML+ G ++ L E
Sbjct: 480 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 539
Query: 305 GMEE 308
G E
Sbjct: 540 GKVE 543
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT---EEAYSVFKRMSRKPGTEPT 220
+ I A ++E+ + G+ D+++H R A VF+ ++ K G PT
Sbjct: 155 IEIASAMADLNEVGESGVA--VAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANK-GVFPT 211
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V T ++ +++ + +++ M+ +GV P ++++ST IN+ C K++DA + F
Sbjct: 212 VKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFF 270
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+M +G+ P ++NL L G + A +K+ K
Sbjct: 271 DMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVK 309
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 92/230 (40%), Gaps = 17/230 (7%)
Query: 105 EMEATNCKP-----SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+++T CK SPH F ++ + AL FF F ++ + + +
Sbjct: 61 SLDSTQCKQLIPHLSPHQFDSVFFSVRRNVNPKTALNFFY------FASDSCGFRFTLRS 114
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
YC MR + R I R ++ R E S ++ +
Sbjct: 115 YCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGD--PKNRHIEIASAMADLNEVGESGV 172
Query: 220 TVSTYEIVVRMFCY---NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
V+ ++++ ++C N A+ ++ + +GV P + + L++SL ++L+ +
Sbjct: 173 AVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSY 232
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+ M G+ P LFS A G E A+ L ++KL +P V
Sbjct: 233 WVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNV 281
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 143/289 (49%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI TLC+ V A V D M R PD+ +Y ILLE + + E+ M+
Sbjct: 170 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 229
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G P+ V+Y ++++ C D+A+EL R + + CKPS + T++ GL S +R
Sbjct: 230 AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 289
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + + P T+N V+ + C + A +++++M K G N TY+ ++
Sbjct: 290 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 349
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L + + A + +M + G +P + TY +++ C AQ A + D M G
Sbjct: 350 NGLCEQRNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGC 408
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
LP ++TLI LC + + DA + F++M D G P +S + L
Sbjct: 409 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 457
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 153/320 (47%), Gaps = 2/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N L++ CK R +A E+ D M+ P+ +Y +L++G + ++
Sbjct: 197 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 256
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ R + G +P V+Y ++ CSA+R+ +A EL EM NC P+ F +I
Sbjct: 257 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 316
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + L +A+Q + K G TYNA++ C ++ A ++ +M+ G P+
Sbjct: 317 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 376
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +L L A + +A + M++ G P T+ ++ C + A+ ++
Sbjct: 377 IVTYNTLLKGLCSAAQWVDAEELMDNMTQN-GCLPDNVTFNTLIGFLCQKGLMVDAIEVF 435
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M +G P YST+I+ L KLD A + F EM G P +++ L + L D+
Sbjct: 436 KQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFN-PDKIYQLLAECLNDD 494
Query: 305 GMEETAVVLAQKIDKLRKTP 324
E A+ +K+ +P
Sbjct: 495 DTIEEAIQTVRKLQDSGISP 514
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 143/308 (46%), Gaps = 5/308 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L D C++ + A+ V M P+ +Y L+ ++ + V +M
Sbjct: 138 YGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDML 194
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDVV+Y I++ A C + Y +A+EL M A C P+ + L++G+ E +
Sbjct: 195 CRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVD 254
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL+ G +P YN V+ C + R DA ++ EM + PN T+++V+
Sbjct: 255 DALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVI 314
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L + G ++A + ++MS+ G + TY ++ C VD AM + +MK+ G
Sbjct: 315 YSLCRKGLLQQAIQLLEKMSKH-GCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGC 373
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV- 311
P + Y+TL+ LC + DA + M G P F+ L L +G+ A+
Sbjct: 374 KPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIE 433
Query: 312 VLAQKIDK 319
V Q DK
Sbjct: 434 VFKQMPDK 441
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 2/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N +I+ LC+ R+V+ A + KMK PDI +Y LL+G
Sbjct: 333 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQ 392
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ M +G PD V++ +I C +A+E+F++M C P+ + T
Sbjct: 393 WVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYST 452
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL +L +AL+ F + +GF P+ Y + I +A + + +++ G
Sbjct: 453 IISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSG 511
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T Y+ +L L + G+TE A + M G P TY I++ Y ++ A
Sbjct: 512 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSS-GCMPDDLTYVILIEGLAYEGYLNEA 570
Query: 241 MRIWDEMKARGVL 253
+ ++ +R VL
Sbjct: 571 RELLIKLCSRDVL 583
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 37/261 (14%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G VV+YG + + +C A R +A + M +P+ + + LI+ L ++ +A
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGMPV---QPNAYTYNPLIHTLCERGQVRDA 186
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L RG P+ TYN ++ A C A ++D MR G PN TY++++
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246
Query: 195 LIKAGRTEEAYSVFKRMSR---KPGT-------------------------------EPT 220
+ G ++A + + + KP T P
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
+T+ +V+ C + A+++ ++M G + Y+ +IN LC + +D A
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 366
Query: 281 EMLDIGIRPPGQLFSNLKQAL 301
+M G +P ++ L + L
Sbjct: 367 KMKSYGCKPDIVTYNTLLKGL 387
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G+ ++ FN LI C++ +E A + +M+ RR PD+ S++ L+ + ++
Sbjct: 255 MDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGE 314
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E REM++ G PD V Y ++I C A EA+ + EM A C P + T
Sbjct: 315 MDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNT 374
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL E+RLS+A + + K+RG P+ T+ ++ YC I A + D +
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ + + G +A ++ M + P TY I++ C QVD A
Sbjct: 435 LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE-IFPNHVTYSILIDSHCEKGQVDNA 493
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
DEM +G++P + Y+++I C + ++ +M + P ++ L
Sbjct: 494 FAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHG 553
Query: 301 LRDEG 305
EG
Sbjct: 554 YVKEG 558
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K L +N ++ L ++ ++A+EVF M PD++S+ +L+ G+ + L
Sbjct: 224 GIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEA 283
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
Y+EM+ PDVVS+ +I D A E REM P I+ +I G
Sbjct: 284 LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGG 343
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EAL+ + G P+ TYN ++ C R++DA +++EM++ G+ P+
Sbjct: 344 FCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPD 403
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++H + G E+A F +S + P + TY ++ C + A +W
Sbjct: 404 LCTFTTLIHGYCRDGNIEKALQFFDTISDQR-LRPDIVTYNTLIDGMCRQGDLGKANELW 462
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D+M +R + P YS LI+S C + ++D+A + EM++ GI P
Sbjct: 463 DDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVP 507
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 146/289 (50%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FG ++ +N L++ LCK R + A+E+ ++MK+R PD+ ++T L+ G+ + N
Sbjct: 360 MVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGN 419
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + + D PD+V+Y +I+ C +A EL+ +M + P+ +
Sbjct: 420 IEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSI 479
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ + ++ A F + +G P TYN+++ YC S ++ + + +MR
Sbjct: 480 LIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++H +K G+ EA+++ K M + +P TY +++ F + + A
Sbjct: 540 VMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENE-NVQPDAVTYNMIISGFSVHGNMQEA 598
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ +M ARG+ P + Y ++IN + + EML G+ P
Sbjct: 599 DWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 142/293 (48%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N ++ + CK+ V +M+KR PD+ ++ ++++ + ++ + + M
Sbjct: 162 LNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMV 221
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P +V+Y ++ R+D+A E+FR M+A P F LI G L
Sbjct: 222 SKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELE 281
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL+F+ + + R P+ +++ ++G + ++ A + EMR+ G+ P+ Y +V+
Sbjct: 282 EALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+AG EA V M G P V TY ++ C ++ A + +EMK RGV
Sbjct: 342 GGFCRAGLMLEALRVRDEMV-AFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGV 400
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + ++TLI+ C + ++ A ++F + D +RP ++ L + +G
Sbjct: 401 PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQG 453
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 3/285 (1%)
Query: 42 DPDIKSYT--ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
+ ++ +YT I++ + + ++ V EM+ PDVV++ +M++A A + A
Sbjct: 154 NSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAA 213
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ L M + KP + +++ GL R +A + F G P+ ++N ++G
Sbjct: 214 MALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGG 273
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+C + + +A R EMR + P+ ++ ++ + G + A + M R+ G P
Sbjct: 274 FCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM-REFGLMP 332
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
Y +V+ FC + A+R+ DEM A G LP + Y+TL+N LC E +L DA +
Sbjct: 333 DGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELL 392
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM + G+ P F+ L +G E A+ I R P
Sbjct: 393 NEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRP 437
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
+ +R + ++N + + + +++ + E + +KR P+ T+N +V
Sbjct: 143 TADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVD 202
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
A + + A ++D M GI P TY+ VL L++ GR ++A VF+ M G
Sbjct: 203 ARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMD-ACGVA 261
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V ++ +++ FC +++ A+R + EM+ R V P + +S LI ++D A +Y
Sbjct: 262 PDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY 321
Query: 279 FQEMLDIGIRPPGQLFS 295
+EM + G+ P G +++
Sbjct: 322 LREMREFGLMPDGVIYT 338
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 88/174 (50%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID+ C+ V+ A D+M + P+I +Y +++G+ + N+ + +M+
Sbjct: 477 YSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMR 536
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D PD+++Y +I+ + + EA L + ME N +P + +I+G +
Sbjct: 537 HDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQ 596
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
EA + + RG EP+ TY +++ + + ++++ DEM + G+ P+ +
Sbjct: 597 EADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDK 650
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 73/145 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I C+S +V + Q+ KM+ + PD+ +Y L+ G+ ++ +
Sbjct: 504 GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M+++ +PD V+Y ++I+ EA ++++M A +P + + ++ING
Sbjct: 564 FNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMING 623
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPE 149
++ Q + ++G P+
Sbjct: 624 HVVAGNSKKSFQLHDEMLQKGLAPD 648
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 156/352 (44%), Gaps = 36/352 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+ + +N ++D LCK + A+++ MK R P+ +Y IL+ G+ +
Sbjct: 234 MGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V M + PDV +Y ++IN C+ R +EA +L EME P + T
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING ++SEA + + ++G +P A T+N +V YC +++DA + +M + G
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC-------- 232
P+ TY+ +++ KAG EA+ M RK +V T ++R C
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV-TLNTILRTLCREKKLEEA 472
Query: 233 ---------------------------YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ VD A+++WDEMK + ++P Y+ +I
Sbjct: 473 YKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGG 532
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
LC K + A E+L+ G+ P ++ + EG E A K+
Sbjct: 533 LCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 156/369 (42%), Gaps = 74/369 (20%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG---W-------- 55
LPD +N LI+ LC +E A ++ D+M+ + PD+ SY L+ G W
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369
Query: 56 --------GQQKNLLSMNEVYR----------------EMKDDGFEPDVVSYGIMINAHC 91
G + N ++ N + + +M++ GF PD V+Y +IN +C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF----- 146
A EA EM N K T++ L EK+L EA + ++KRG+
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEV 489
Query: 147 ------------------------------EPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
P TYN ++G C + A ++E+
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G+ P+ TY+ +LH + G E+A+ +M +P V T I++R C
Sbjct: 550 LESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN-SFKPDVFTCNILLRGLCMEGM 608
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
++ A+++++ ++G Y+TLI SLC E +LDDA EM + + P ++
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668
Query: 297 LKQALRDEG 305
+ AL D G
Sbjct: 669 IITALTDSG 677
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 134/279 (48%), Gaps = 3/279 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+ + FN +I C + A E + M K PD +Y +L+ ++ L
Sbjct: 201 KLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLG 260
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ +MK G P+ +Y I++ +C EA + M N P + LI
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLI 320
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV-GAYCWSMRINDAYRMMDEMRKCGI 181
NGL +E R+ EA + + + P+ +YN ++ G WS +I++A+++++EM + G+
Sbjct: 321 NGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWS-KISEAFKLLEEMSEKGV 379
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN T++I++ K G+ ++A + +M + G P TY ++ +C + A
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKM-EESGFSPDCVTYNTLINGYCKAGNMGEAF 438
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
R DEM + + +T++ +LC E KL++A K
Sbjct: 439 RTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLS 477
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 149/319 (46%), Gaps = 5/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCK---SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M + L+ L N L+++L + S V ++E F+ K P++ ++ I++ G+
Sbjct: 161 MKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCL 220
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ E M PD V+Y +++A C R +A +L +M++ P+ +
Sbjct: 221 ENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNT 280
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L+ G L EA + P+ TYN ++ C RI +A+++ DEM
Sbjct: 281 YNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEME 340
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ P+ +Y+ +++ ++ + EA+ + + MS K G +P T+ I+V+ +C ++
Sbjct: 341 NLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK-GVKPNAVTHNIMVKWYCKEGKM 399
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D A +M+ G P Y+TLIN C + +A + EM ++ + +
Sbjct: 400 DDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459
Query: 298 KQAL-RDEGMEETAVVLAQ 315
+ L R++ +EE +L+
Sbjct: 460 LRTLCREKKLEEAYKLLSS 478
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 4/284 (1%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN---EVYREMKD 73
I +S A ++F KMK+ R P++ + LL + + S++ E + +
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIK 201
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G P+V ++ I+I +C ++ +AVE M NC P + T+++ L + RL +
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGD 261
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A K RG P TYN +V YC + +A +++ M + + P+ TY+++++
Sbjct: 262 ARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLIN 321
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L GR EEA+ + M P V +Y ++ +++ A ++ +EM +GV
Sbjct: 322 GLCNEGRIEEAFKLRDEMENLK-LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVK 380
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P ++ ++ C E K+DDA +M + G P ++ L
Sbjct: 381 PNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + +N LI+ CK+ ++ A D+M ++ D + +L ++K
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK 468
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ + G+ D VSYG +I + D A++L+ EM+ PS +
Sbjct: 469 LEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNC 528
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL + +A+ + + G P+ TYN ++ YC + A++ ++M +
Sbjct: 529 IIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENS 588
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T +I+L L G E+A +F K TV TY ++ C ++D A
Sbjct: 589 FKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTV-TYNTLITSLCKEGRLDDA 647
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ EM+ + + P + Y+ +I +L ++ +A ++ +ML+ G P
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 27/327 (8%)
Query: 1 MDKFG---LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
MD+ G +K + N ++ TLC+ + +E A ++ +KR + D SY L+ G+ +
Sbjct: 441 MDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFK 500
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
N+ +++ EMK+ P V+Y +I C + ++A+ E+ + P
Sbjct: 501 DGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETT 560
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+++G E + +A QF + + F+P+ T N ++ C + A ++ +
Sbjct: 561 YNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWV 620
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G +T TY+ ++ L K GR ++A+++ M K P TY ++ + ++
Sbjct: 621 SKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE-LGPDHYTYNAIITALTDSGRI 679
Query: 238 DMAMRIWDEMKARGVLP--VMHM---------------------YSTLINSLCHEDKLDD 274
A +M +G LP V+ + YS I LC E K D
Sbjct: 680 REAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKD 739
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQAL 301
A + F E GI + NL L
Sbjct: 740 AMRIFGESKQKGITVDKSTYINLMDGL 766
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 9/234 (3%)
Query: 94 KRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
+R+D + + R PS + T I + A Q F + K+ P T
Sbjct: 119 RRHDLHLSILRLTS-----PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTC 173
Query: 154 NAVVGA---YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
N ++ + Y S ++ + ++ K GI PN T++IV++ + ++A
Sbjct: 174 NTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNV 233
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M K P TY ++ C ++ A + +MK+RG+LP + Y+ L+ C
Sbjct: 234 MG-KYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMG 292
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L +A + M + P ++ L L +EG E A L +++ L+ P
Sbjct: 293 WLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLP 346
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 148/293 (50%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F LI LC++ + RA E+ + + + D+ SY+ ++ + + NEVY+ M
Sbjct: 407 FGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMV 466
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG +P+ Y +IN C + ++A++++ EM + C P+ + TLI+GL ++
Sbjct: 467 KDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQ 526
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + +RGF+P+ TY +++ C +++ A R+ DE+ G+ + ++I++
Sbjct: 527 EASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILI 586
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L AG+ +EA+ ++ M K P + TY ++ F +D A +W + G+
Sbjct: 587 HGLCSAGKVDEAFCIYLEMKEK-NCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGL 645
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + Y+T I LC ++ + E+L GI P +S L +A+ G
Sbjct: 646 KPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 153/318 (48%), Gaps = 3/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL ++ +N LI C+ A + +D I +Y I+ +G
Sbjct: 325 MVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGM 383
Query: 61 LLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ E+ +++++D PD V++G +I+ C + A E+ + + + +
Sbjct: 384 VSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYS 443
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
++IN + R +A + + K G +P + YNA++ +C +INDA ++ EM
Sbjct: 444 SMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSN 503
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P TY+ ++ L KA + +EA S+ K M + G +P + TY ++R C + +VD+
Sbjct: 504 GCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLER-GFKPDIRTYASLIRGLCRDKKVDV 562
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+RIWDE+ G+ + +++ LI+ LC K+D+A + EM + P ++ L
Sbjct: 563 ALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMD 622
Query: 300 ALRDEGMEETAVVLAQKI 317
+ G + A L I
Sbjct: 623 GFYEIGSIDKAASLWTAI 640
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 149/355 (41%), Gaps = 36/355 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L + ++D LCK + A EV+ +M D +Y IL+ G + ++ S
Sbjct: 259 GASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSA 318
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKR----------------------------- 95
VY +M G DV Y +I C R
Sbjct: 319 ARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGL 378
Query: 96 -----YDEAVELFREMEA-TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
EA EL +++E +C P F TLI+GL + A + ++ G E +
Sbjct: 379 LDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELD 438
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+Y++++ +C R +DA + M K G PN+ Y+ +++ + + +A ++
Sbjct: 439 VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI 498
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M+ G PT+ TY ++ C + A + EM RG P + Y++LI LC +
Sbjct: 499 EMTSN-GCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRD 557
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
K+D A + + E+LD G++ + + L L G + A + ++ + +P
Sbjct: 558 KKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSP 612
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 132/262 (50%), Gaps = 1/262 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ ++ +I+ CK A EV+ M K P+ Y L+ G+ + +
Sbjct: 434 GEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDA 493
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y EM +G P +++Y +I+ C A++Y EA L +EM KP + +LI G
Sbjct: 494 IKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG 553
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +K++ AL+ + + G + + +N ++ C + ++++A+ + EM++ PN
Sbjct: 554 LCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPN 613
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ + G ++A S++ + G +P + TY ++ C + + +
Sbjct: 614 LVTYNTLMDGFYEIGSIDKAASLWTAILDN-GLKPDIVTYNTRIKGLCSCNRTPEGVLLL 672
Query: 245 DEMKARGVLPVMHMYSTLINSL 266
+E+ A G++P + +S L+ ++
Sbjct: 673 NEVLATGIMPTVITWSILVRAV 694
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 140/328 (42%), Gaps = 37/328 (11%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ L +N ++ +LC V+RA +F +++R PD +Y+ L+ G + L +
Sbjct: 154 IAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNAL 213
Query: 66 EVYREM------------------------------------KDDGFEPDVVSYGIMINA 89
++ EM +D G P++ +Y +M++
Sbjct: 214 DLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDG 273
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C R+ EA E++ M A N + + LI+GL + A + + K G +
Sbjct: 274 LCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLD 333
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
YN+++ +C R +A++ D GI T TY+I+ L+ +G EA + K
Sbjct: 334 VSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT-TYNIMTKGLLDSGMVSEATELLK 392
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
++ P T+ ++ C N + A I ++ + G + YS++IN C +
Sbjct: 393 QLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKD 452
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ DA + ++ M+ G +P +++ L
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNAL 480
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 109/235 (46%), Gaps = 4/235 (1%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREME----ATNCKPSPHIFCTLINGLGSEKR 130
G P V S+ +++A A+RY +A F + P+ + ++ L +
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ A+ F ++RG P+ TY+ ++ ++++A ++DEM G+ + Y+
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L + G E+A V++++ R PG P ++TY++++ C + A +W M A
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y LI+ LC +D A + + +M+ G+ ++++L + + G
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVG 348
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 134/321 (41%), Gaps = 42/321 (13%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK----RRFDPDIKSYTILLEGWGQQK 59
G + N L+D ++R A F + RR P++++Y I+L +
Sbjct: 113 LGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARG 172
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
++ ++ ++ G PD V+Y +++ + D A++L EM
Sbjct: 173 DVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM------------- 219
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RK 178
G + +A YNA++ + A ++ +++ R
Sbjct: 220 ----------------------PNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRD 257
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G PN TY ++L L K GR +EA V+ RM TV TY I++ C + VD
Sbjct: 258 PGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTV-TYGILIHGLCRSGDVD 316
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A R++ +M G++ + +Y++LI C + +A K++ GIR ++ +
Sbjct: 317 SAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQI-TTYNIMT 375
Query: 299 QALRDEGMEETAVVLAQKIDK 319
+ L D GM A L ++++
Sbjct: 376 KGLLDSGMVSEATELLKQLEN 396
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K +N LI+ C+ + A +++ +M P I +Y L++G + +
Sbjct: 465 MVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEK 524
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +EM + GF+PD+ +Y +I C K+ D A+ ++ E+ + +
Sbjct: 525 YQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNI 584
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL S ++ EA + + K++ P TYN ++ + I+ A + + G
Sbjct: 585 LIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG 644
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ P+ TY+ + L RT E + + G PTV T+ I+VR
Sbjct: 645 LKPDIVTYNTRIKGLCSCNRTPEGVLLLNEV-LATGIMPTVITWSILVR 692
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 4/295 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N +ID CK V+ A E+ + F PD +Y L+ G + ++ E
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ E + G +PD+V Y ++ C A+++ EM C P + +INGL
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 409
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+S+A + +G+ P+ T+N ++ YC ++++ A ++++ M + GI P+T
Sbjct: 410 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI 469
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ VL+ L KAG+ E F+ M K G P TY I++ FC + +++ A ++ +
Sbjct: 470 TYNSVLNGLCKAGKVNEVNETFQEMILK-GCHPNPITYNILIENFCRSNKMEEASKVIVK 528
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M G+ P ++TLI C L+ A FQ++ + G F+ L A
Sbjct: 529 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAF 583
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 155/312 (49%), Gaps = 3/312 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ L +N I LC++ + A + D M+ PD+ +Y L+ G ++
Sbjct: 219 GMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEA 277
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
R M + G PD +Y +I+ +C EA EL ++ P +C+LING
Sbjct: 278 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLING 337
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +E + AL+ F +++ +G +P+ YN++V C I A ++M+EM + G P+
Sbjct: 338 LCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPD 397
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+TY+IV++ L K G +A V K G P V T+ ++ +C ++D A+++
Sbjct: 398 IQTYNIVINGLCKMGNISDATVVMNDAIMK-GYLPDVFTFNTLIDGYCKRLKLDSALQLV 456
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RD 303
+ M G+ P Y++++N LC K+++ + FQEM+ G P ++ L + R
Sbjct: 457 ERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRS 516
Query: 304 EGMEETAVVLAQ 315
MEE + V+ +
Sbjct: 517 NKMEEASKVIVK 528
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 141/286 (49%), Gaps = 4/286 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K +PD + LI+ LC VERA E+F++ + + PDI Y L++G Q +L
Sbjct: 321 FKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLIL 380
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+V EM ++G PD+ +Y I+IN C +A + + P F TLI
Sbjct: 381 HALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 440
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +L ALQ + + G P+ TYN+V+ C + ++N+ EM G
Sbjct: 441 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 500
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY+I++ + ++ + EEA V +MS++ G P ++ ++ FC N ++ A
Sbjct: 501 PNPITYNILIENFCRSNKMEEASKVIVKMSQE-GLHPDAVSFNTLIYGFCRNGDLEGAYL 559
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
++ +++ +G ++TLI + + + A K F EML G R
Sbjct: 560 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 605
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 156/322 (48%), Gaps = 1/322 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ +N L+ LC + A +V ++M + PDI++Y I++ G + N+
Sbjct: 358 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 417
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V + G+ PDV ++ +I+ +C + D A++L M P + +++NG
Sbjct: 418 TVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNG 477
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +++E + F + +G P TYN ++ +C S ++ +A +++ +M + G+ P+
Sbjct: 478 LCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPD 537
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+++ +++ + G E AY +F+++ K G T T+ ++ F + MA +I+
Sbjct: 538 AVSFNTLIYGFCRNGDLEGAYLLFQKLEEK-GYSATADTFNTLIGAFSGKLNMHMAEKIF 596
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM ++G + Y LI+ C +D A + EM+ G P F + +L
Sbjct: 597 DEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVN 656
Query: 305 GMEETAVVLAQKIDKLRKTPLV 326
AV + + K+ P V
Sbjct: 657 HRVFQAVGIIHIMVKIGVVPEV 678
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 134/289 (46%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ +N +I+ LCK ++ A V + + + PD+ ++ L++G+ ++
Sbjct: 389 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 448
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L S ++ M + G PD ++Y ++N C A + +E E F+EM C P+P +
Sbjct: 449 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 508
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++ EA + + + G P+A ++N ++ +C + + AY + ++ + G
Sbjct: 509 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
T++ ++ A +F M K G TY +++ C A VD A
Sbjct: 569 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK-GHRADSYTYRVLIDGSCKTANVDRA 627
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM +G +P M + +INSL ++ A M+ IG+ P
Sbjct: 628 YMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 141/306 (46%), Gaps = 6/306 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD F P +N ++D L + + ++A +V+ +M PD+ ++TI L +
Sbjct: 79 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 138
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R + G V+Y ++ + +A +LF +M T+ P+ F
Sbjct: 139 PHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNK 194
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ L + EA G+ +RG TYN + C + R+ +A R++D MR
Sbjct: 195 VLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYA 254
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ L K +EA +RM + G P TY ++ +C + V A
Sbjct: 255 V-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ-GCLPDDFTYNTIIDGYCKISMVQEA 312
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +G +P Y +LIN LC E ++ A + F E GI+P ++++L +
Sbjct: 313 TELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKG 372
Query: 301 LRDEGM 306
L +G+
Sbjct: 373 LCLQGL 378
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA--PTYNAVVGAYCWSMRINDAYRMMDE 175
+C LI L S R+ ++ R P P Y A + AY + R+ DA +
Sbjct: 20 YCALIRPLASAGRVDAVDAAVASARSR-LSPATIHPLYVASIRAYARAGRLRDAVDAFER 78
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M P Y+ ++ L+ A ++A+ V+ RM G P + T+ I +R FC A
Sbjct: 79 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM-LAAGVSPDLHTHTIRLRSFCLTA 137
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+ +A+R+ + RG + Y T++ L DA + F +ML + P F+
Sbjct: 138 RPHIALRLLRALPHRGAVA----YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFN 193
Query: 296 NLKQALRDEG-MEETAVVLAQKIDK 319
+ AL G + E ++L + I +
Sbjct: 194 KVLHALCKRGDVLEAGLLLGKVIQR 218
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 65/149 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + FN LI C++ +E A +F K++++ + ++ L+ + + N
Sbjct: 529 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 588
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G D +Y ++I+ C D A EM PS F
Sbjct: 589 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 648
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+IN L R+ +A+ K G PE
Sbjct: 649 VINSLTVNHRVFQAVGIIHIMVKIGVVPE 677
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 161/326 (49%), Gaps = 4/326 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + + L+D+L +R + + + +F++MK D+ YT ++ + + N
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V E +G EP+ +YG++IN C + + A L +M+ + IF T
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + + +AL+ +K G E + TYN + C R+++A ++ M + G
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ K G EA +F+ M+ K G P+V TY +++ + + A
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEK-GATPSVVTYNVMIDGYTKKGSIREA 476
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R EM+ +G +P ++ Y++L++ C K+D A K F+EM G P ++ L
Sbjct: 477 ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG 536
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L EG E A Q D + K L+
Sbjct: 537 LAKEGRSEAAF---QLYDDMLKAGLI 559
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 132/274 (48%), Gaps = 1/274 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++D LCKS V+ A+ + D M + + Y LL+ + +QK+ + E+ M+++G
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
E V +Y I++++ +A+ + LF EM+A N +++ +IN + A
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + G EP TY ++ +C ++ A ++ +M+ G+G N ++ ++
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ G ++A + M K G E + TY + C ++D A + M GV+P
Sbjct: 363 CRKGMVDDALKIKAAM-EKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPN 421
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
Y+TLI+ C + + +A + F+EM + G P
Sbjct: 422 YVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 455
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 3/225 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
GL Q + FN +ID C+ V+ A ++ M+K + DI +Y L G + L
Sbjct: 348 VGLNQII--FNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDE 405
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ M + G P+ V+Y +I+ HC EA LFREM PS + +I+
Sbjct: 406 AKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMID 465
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G + + EA +F + +K+GF P+ TY ++V +C + +++ A ++ +EM++ G P
Sbjct: 466 GYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEP 525
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
N Y ++ L K GR+E A+ ++ M K G P S Y +V
Sbjct: 526 NVVAYTALISGLAKEGRSEAAFQLYDDM-LKAGLIPDDSLYSALV 569
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G++ ++ +N L LC+ ++ A+ + M + P+ +YT L+ + +
Sbjct: 378 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGD 437
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++REM + G P VV+Y +MI+ + EA +EME P + + +
Sbjct: 438 MVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYAS 497
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ AL+ F + K+RG EP Y A++ R A+++ D+M K G
Sbjct: 498 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG 557
Query: 181 IGPNTRTYDIVLHHL 195
+ P+ Y ++ L
Sbjct: 558 LIPDDSLYSALVGSL 572
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 91/229 (39%), Gaps = 1/229 (0%)
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
+ + D A L R + + SP +++GL R+ +A + + G A
Sbjct: 154 AGRLADAAGLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNAL 213
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
YN+++ Y +++ M GI TY I++ L A + ++F M
Sbjct: 214 CYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEM 273
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ V Y V+ +C + A ++ DE GV P Y LIN C +
Sbjct: 274 -KANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQ 332
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
++ A +M G+ +F+ + +GM + A+ + ++K+
Sbjct: 333 MEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKM 381
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G ++ + L+ C + V+ A ++F++MK+R +P++ +YT L+ G ++
Sbjct: 483 MEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGR 542
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
+ ++Y +M G PD Y ++ + + R D V
Sbjct: 543 SEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDVKVS 583
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 161/324 (49%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + + L+D L ++ + + + V+D+MK++ D+ Y+ ++ + + N
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EV+ E G EP+ +YG +IN C + + A L +M+ + +F T
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + +AL+ +K G E + TYN + C R+ DA +++ M + G
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN +Y ++ K G EA +F+ M K G+ P+V TY +++ + N + A
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGK-GSRPSVVTYNVMIDGYIKNGSIREA 447
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R EM+ +G++P ++ Y+ L++ C K+D A + F+EM G +P ++ L
Sbjct: 448 ERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSG 507
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG E A L + TP
Sbjct: 508 LAKEGRSEEAFQLYDDMLAAGLTP 531
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 1/216 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +ID C+ VE+A E+ M+K + DI +Y L G + + ++ M
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMA 385
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+ VSY +I+ H EA LFR+ME +PS + +I+G +
Sbjct: 386 EKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIR 445
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA +F + +K+G P+ TY +V +C + +++ A R+ +EM+ G PN Y ++
Sbjct: 446 EAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALV 505
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
L K GR+EEA+ ++ M G P + Y ++V
Sbjct: 506 SGLAKEGRSEEAFQLYDDM-LAAGLTPDDTLYSVLV 540
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 131/274 (47%), Gaps = 1/274 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++D CKS V+ A + D++ + + Y LL+ + +Q+N ++ + +EM++ G
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
EP V +Y I+++ A + ++ EM+ N + + +IN + A
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRAS 273
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + G EP TY A++ +C +I A ++ +M+ G+G N ++ ++
Sbjct: 274 EVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY 333
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ G E+A + K + K G E + TY + C +++ A ++ M +GV P
Sbjct: 334 CRHGMVEKALEI-KAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPN 392
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
Y+TLI+ E + +A + F++M G RP
Sbjct: 393 YVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRP 426
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 99/195 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G++ ++ +N L LC+ +E A+++ M ++ P+ SYT L+ ++ +
Sbjct: 349 MEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGD 408
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++R+M+ G P VV+Y +MI+ + EA +EME P + +
Sbjct: 409 MVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAG 468
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ AL+ F + K RG +P Y A+V R +A+++ D+M G
Sbjct: 469 LVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAG 528
Query: 181 IGPNTRTYDIVLHHL 195
+ P+ Y +++ L
Sbjct: 529 LTPDDTLYSVLVGSL 543
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 120/259 (46%), Gaps = 1/259 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
S +++++G+ + ++ + + E+ G + Y +++++ + D L +EM
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEM 209
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
E +P+ + L++GL +S+ + + K++ + Y+AV+ AYC +
Sbjct: 210 ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNV 269
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
A + DE G+ PN RTY +++ K G+ E A + M + G +
Sbjct: 270 RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLR-GVGHNQIVFNT 328
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ +C + V+ A+ I M+ G+ ++ Y+TL LC ++++DA K M + G
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388
Query: 287 IRPPGQLFSNLKQALRDEG 305
+ P ++ L EG
Sbjct: 389 VAPNYVSYTTLISIHAKEG 407
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 86/207 (41%), Gaps = 1/207 (0%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+P +++G + +A + + G A YN+++ +Y + ++
Sbjct: 147 TPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLL 206
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
EM G+ P TY I++ L +AG + +V+ M RK V Y V+ +C
Sbjct: 207 KEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRK-NVAGDVYFYSAVINAYCR 265
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
V A ++DE GV P Y LIN C +++ A +M G+ +
Sbjct: 266 GGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIV 325
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKL 320
F+ + GM E A+ + ++K+
Sbjct: 326 FNTMIDGYCRHGMVEKALEIKAVMEKM 352
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL ++ + L+ C + V+ A +F++MK R P++ +YT L+ G ++
Sbjct: 454 MEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGR 513
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD 97
++Y +M G PD Y +++ + + R D
Sbjct: 514 SEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKD 550
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 160/330 (48%), Gaps = 20/330 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + + L+D+L +R + + + +F++MK D+ YT ++ + + N
Sbjct: 192 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 251
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V E +G EP+ +YG++I C + + A L +M+ + IF T
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 311
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFE-------------------PEAPTYNAVVGAYC 161
+I+G + + +AL+ +K G E P TY ++ +C
Sbjct: 312 MIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHC 371
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ +A R+ EM + G P+ TY +++H K GR EA K M +K G P V
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKK-GFVPDV 430
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
TY +V C N +VD+A+++++EMK RG P + Y+ LI+ L E + + A + + +
Sbjct: 431 YTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDD 490
Query: 282 MLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
ML G+ P L+S L +L + ++ V
Sbjct: 491 MLKAGLIPDDSLYSALVGSLHTDNRKDVKV 520
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 154/365 (42%), Gaps = 58/365 (15%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++D LCKS V+ A+ + D M + + Y LL+ + +QK+ + E+ M+++G
Sbjct: 137 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 196
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
E V +Y I++++ +A+ + LF EM+A N +++ +IN + A
Sbjct: 197 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 256
Query: 136 QFFGQSKKRGFEPEAPTY-----------------------------------NAVVGAY 160
+ + G EP TY N ++ Y
Sbjct: 257 KVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 316
Query: 161 CWSMRINDAYRMMDEMRKCGIG-------------------PNTRTYDIVLHHLIKAGRT 201
C ++DA ++ M K G+ PN TY ++ K G
Sbjct: 317 CRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDM 376
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EA +F+ M+ K G P+V TY +++ + ++ A R EM+ +G +P ++ Y++
Sbjct: 377 VEARRLFREMAEK-GATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYAS 435
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
L++ C K+D A K F+EM G P ++ L L EG E A Q D +
Sbjct: 436 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAF---QLYDDML 492
Query: 322 KTPLV 326
K L+
Sbjct: 493 KAGLI 497
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 90/229 (39%), Gaps = 1/229 (0%)
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
+ + D A L R + + SP +++GL R+ +A + + G A
Sbjct: 108 AGRLADAAGLLERALGSCPGSVSPFAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNAL 167
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
YN+++ Y +++ M GI TY I++ L A + ++F M
Sbjct: 168 CYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEM 227
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ V Y V+ +C + A ++ DE GV P Y LI C +
Sbjct: 228 -KANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQ 286
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
++ A +M G+ +F+ + +GM + A+ + ++K+
Sbjct: 287 MEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKI 335
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 149/294 (50%), Gaps = 11/294 (3%)
Query: 1 MDK-FGLKQEL------PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTI 50
+DK FGL E+ P+ FN L+D LCK + A+ + M K PD+ +Y
Sbjct: 240 LDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNA 299
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
L++G+ K V+ M G DV SY +MI+ K DEA++LF M N
Sbjct: 300 LMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNEN 359
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
P + +LI+GL R++ AL++ + RG P TY +++ A C S +++ A
Sbjct: 360 VIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAI 419
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++ +++ GI N TY+I++ L K GR +A VF+ + K G V TY I++
Sbjct: 420 ALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMK-GHNVDVVTYSIMING 478
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
C + D A+ + +M+ +G +P Y T+IN+ +D D A K +EM+D
Sbjct: 479 LCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 168/355 (47%), Gaps = 42/355 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M+ G++ N LI++ C R + A VF K+ K + PDI +YT L+ G GQ
Sbjct: 75 MELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQ 134
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K L+ ++ + G + D VSYG +IN C + A+ L R++E C+P +
Sbjct: 135 VKESLNFHD---RLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVM 191
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+I+GL +K + +A + + ++ P TY +++ +C +++ A+ +++EM
Sbjct: 192 YNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMV 251
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV--------- 228
+ PN T++ ++ L K G+ EA S+ M K G P V TY ++
Sbjct: 252 LKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVM-MKEGVGPDVFTYNALMDGYFLVKEA 310
Query: 229 ----RMFCYNAQ----------------------VDMAMRIWDEMKARGVLPVMHMYSTL 262
+F AQ +D AM +++ M+ V+P + YS+L
Sbjct: 311 GKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSL 370
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
I+ LC +++ A KY EM D G P +++L AL + A+ L +KI
Sbjct: 371 IDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKI 425
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 36/349 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + + LI+ LCK A + K++ PD+ Y +++G + K +
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDA 208
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y EM + P+VV+Y +I C + D+A L EM N P+ F TL++G
Sbjct: 209 FDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDG 268
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY------------------------ 160
L E ++ EA K G P+ TYNA++ Y
Sbjct: 269 LCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCD 328
Query: 161 --CWSMRIN--DAYRMMDE-------MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+S+ I+ +M+DE MR + P+ Y ++ L K+GR A
Sbjct: 329 VHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVD 388
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M + G P V TY ++ C + QVD A+ + ++K +G+ M+ Y+ L++ LC +
Sbjct: 389 EMHDR-GQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKD 447
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+L DA K FQ++L G +S + L E + + A+ L K++
Sbjct: 448 GRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKME 496
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 142/298 (47%), Gaps = 1/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI C +++A + ++M + +P++ ++ L++G ++ + + M
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G PDV +Y +++ + K +A +F M H + +I+GL K L
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLD 346
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ F + P+ Y++++ C S RIN A + +DEM G PN TY ++
Sbjct: 347 EAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLI 406
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+ + ++A ++ K++ + G + + TY I+V C + ++ A +++ ++ +G
Sbjct: 407 DALCKSHQVDKAIALLKKI-KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGH 465
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ YS +IN LC E D+A +M D G P + + A ++ M + A
Sbjct: 466 NVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKA 523
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 131/282 (46%), Gaps = 14/282 (4%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
LP+ N ID+ F++M + R P I + +L + K+ + +
Sbjct: 25 HSLPNLNDAIDS-------------FNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHL 71
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
++ M+ G + + ++ I+IN++C ++ + A +F ++ +P + TLI GL
Sbjct: 72 FQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCL 131
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
++ E+L F + +G + + +Y ++ C + A R++ ++ P+
Sbjct: 132 NGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVM 191
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y+ ++ L K +A+ ++ M K P V TY ++ FC Q+D A + +EM
Sbjct: 192 YNTIIDGLCKDKLVRDAFDLYCEMFEKR-VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEM 250
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ V P + ++TL++ LC E K+ +A M+ G+ P
Sbjct: 251 VLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGP 292
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 1 MDKF-GLKQE--LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
MD F G++ E +PD ++ LID LCKS + A + D+M R P++ +YT L++
Sbjct: 349 MDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDA 408
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ + + +++KD G + ++ +Y I+++ C R +A ++F+++
Sbjct: 409 LCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVD 468
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND-AYRMM 173
+ +INGL E EAL + + +G P+A Y ++ A+ + +ND A +++
Sbjct: 469 VVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAF-FEKDMNDKAEKLL 527
Query: 174 DEMRKC 179
EM C
Sbjct: 528 REMIDC 533
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 96/208 (46%), Gaps = 5/208 (2%)
Query: 92 SAKRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
S ++A++ F M +P P I F ++ L K + F + + G +
Sbjct: 26 SLPNLNDAIDSFNRM--LRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSN 83
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
T N ++ +YC +IN A+ + ++ K G P+ TY ++ L G+ +E+ +
Sbjct: 84 YITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHD 143
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
R+ + G + +Y ++ C Q A+R+ +++ P + MY+T+I+ LC +
Sbjct: 144 RLVSQ-GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKD 202
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ DA + EM + + P +++L
Sbjct: 203 KLVRDAFDLYCEMFEKRVFPNVVTYTSL 230
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 151/306 (49%), Gaps = 1/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID +CK++ V A +++ +M +R PD+ +Y L+ G+ L +++ +MK
Sbjct: 204 YNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMK 263
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ P+V ++ I+++ C + ++A + M + KP + +L++G S +++
Sbjct: 264 KENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVN 323
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F G Y +V +C +++A + +EMR I PN TY ++
Sbjct: 324 KAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLI 383
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR A + M + G P + TY ++ C N VD A+ + +K +G+
Sbjct: 384 DGLCKLGRIFYALKLVDEMHDR-GQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P M+ Y+ LI LC +L+DA F+++L G ++ + Q D+G + A+
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA 502
Query: 313 LAQKID 318
L K++
Sbjct: 503 LLSKME 508
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 142/287 (49%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K + + FN L+D CK V A+ V M K PD+ +Y L++G+
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK 321
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ M G +V Y M+N C K DEA+ LF EM P+ + +
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL R+ AL+ + RG P TY++++ A C + ++ A ++ ++ G
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY I++ L ++GR E+A +VF+ + K G V Y ++++ FC D A
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVK-GYNLDVYAYTVMIQGFCDKGFFDKA 500
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ + +M+ G +P Y +I SL +D+ D A K +EM+ G+
Sbjct: 501 LALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC H+ +A DK+ + F D SY L+ G + + + ++ + +
Sbjct: 134 FNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD 193
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+P+ V Y ++I+ C AK ++A +L+ +M A P + LI+G + +L+
Sbjct: 194 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLN 253
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+ F + KK P T+N +V +C ++NDA ++ M K I P+ TY+ ++
Sbjct: 254 YAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLM 313
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ +A +F M+ G V Y +V FC VD A+ +++EM+ R +
Sbjct: 314 DGYCSINKVNKAKDIFDSMASG-GVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P + YS+LI+ LC ++ A K EM D G P +S++ AL + A+
Sbjct: 373 IPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIA 432
Query: 313 LAQKI 317
L +
Sbjct: 433 LLTNL 437
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 155/307 (50%), Gaps = 4/307 (1%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K+ PD +N LI + A ++F+KMKK +P++ ++ IL++G+ ++ +
Sbjct: 230 KRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVND 289
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V M D +PDVV+Y +++ +CS + ++A ++F M + + I+ T++N
Sbjct: 290 AKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVN 349
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G K + EA+ F + + R P TY++++ C RI A +++DEM G P
Sbjct: 350 GFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPP 409
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY +L L K ++A ++ + + G P + TY I+++ C + +++ A +
Sbjct: 410 NIVTYSSILDALCKNHHVDKAIALLTNL-KDQGIRPDMYTYTILIKGLCQSGRLEDAQNV 468
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++++ +G ++ Y+ +I C + D A +M D G P + + + +L +
Sbjct: 469 FEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFE 528
Query: 304 EGMEETA 310
+ +TA
Sbjct: 529 KDENDTA 535
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 164/345 (47%), Gaps = 17/345 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + FN LI+ + + +F K+ K+ + P ++ L++G + +
Sbjct: 87 MELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGH 146
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ GF D VSYG +IN C R A++L + ++ +P+ ++
Sbjct: 147 IHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 206
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + K +++A + Q + P+ TYNA++ + ++N A + ++M+K
Sbjct: 207 IIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKEN 266
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T++I++ K G+ +A V M K +P V TY ++ +C +V+ A
Sbjct: 267 INPNVYTFNILVDGFCKEGKVNDAKVVLAIM-MKDDIKPDVVTYNSLMDGYCSINKVNKA 325
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM--------------LDIG 286
I+D M + GV+ + +Y+T++N C +D+A F+EM L G
Sbjct: 326 KDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDG 385
Query: 287 IRPPGQLFSNLKQA--LRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
+ G++F LK + D G V + +D L K VD+
Sbjct: 386 LCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKA 430
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 148/306 (48%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ LCK + A ++ ++ + P+ Y ++++ + K +
Sbjct: 161 GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 220
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y +M PDV +Y +I+ + + + A++LF +M+ N P+ + F L++G
Sbjct: 221 FDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDG 280
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E ++++A K +P+ TYN+++ YC ++N A + D M G+ N
Sbjct: 281 FCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIAN 340
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ Y +++ K +EA ++F+ M R P V TY ++ C ++ A+++
Sbjct: 341 VQIYTTMVNGFCKIKMVDEAINLFEEM-RCRKIIPNVVTYSSLIDGLCKLGRIFYALKLV 399
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM RG P + YS+++++LC +D A + D GIRP ++ L + L
Sbjct: 400 DEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQS 459
Query: 305 GMEETA 310
G E A
Sbjct: 460 GRLEDA 465
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 124/255 (48%), Gaps = 1/255 (0%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P + +L + K+ + ++++M+ +G E D ++ I+IN + +
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
F ++ P+ F TLI GL + + +AL F + +GF + +Y ++ C
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCK 178
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
RI A +++ + + PN Y++++ ++ KA +A+ ++ +M K P V
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR-ICPDVF 237
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY ++ F ++++ A+ ++++MK + P ++ ++ L++ C E K++DA M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297
Query: 283 LDIGIRPPGQLFSNL 297
+ I+P +++L
Sbjct: 298 MKDDIKPDVVTYNSL 312
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 90/241 (37%), Gaps = 37/241 (15%)
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE-------------------- 149
N P F +++ L K S AL Q + G E +
Sbjct: 56 NPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLS 115
Query: 150 ---------------APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
A T+N ++ C I+ A D++ G + +Y +++
Sbjct: 116 FSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLING 175
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K GR A + KR+ K +P Y +++ C V+ A ++ +M A+ + P
Sbjct: 176 LCKVGRITAALQLLKRVDGKL-VQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVL 313
+ Y+ LI+ KL+ A F +M I P F+ L EG + + VVL
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294
Query: 314 A 314
A
Sbjct: 295 A 295
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 9/288 (3%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G + +L F L+ +LC+ +HVE A+ +F + KK F KS+ I+L GW + +L
Sbjct: 218 YGFELDLVGFQILLMSLCRYKHVEEAEALF-REKKDEFPHVTKSWNIILNGWCVKGSLRD 276
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ ++ E D+ +YG INA R AV+LF++M T P I +I+
Sbjct: 277 AQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVKLFKKMWETGINPDVAICNCIID 336
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L + R+ EAL+ FG+ R + + TYN ++ C R+ Y ++D+M G P
Sbjct: 337 QLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSP 396
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSR--KPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
N RTY VL TE+ V M R + G E TY +++ ++
Sbjct: 397 NNRTYSYVLK------TTEKPKDVIALMQRMEQTGCELDSDTYNLILNLYTNWKYEKGVQ 450
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++WDEM+ G P ++ +++ L + KLD+A +Y+ M G+ P
Sbjct: 451 QVWDEMERNGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIP 498
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 39/285 (13%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI--KSYTILLEGWGQQKNLLSMNEVYRE 70
+ ++D L + + V +++FD++ + R + K + +LL + + EV+
Sbjct: 155 YTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTNKMFAVLLNRYAGAHKVQEAIEVFYL 214
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
KD GFE D+V + I++ + C K +EA LFRE
Sbjct: 215 RKDYGFELDLVGFQILLMSLCRYKHVEEAEALFRE------------------------- 249
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
KK F ++N ++ +C + DA R+ +++ + + TY
Sbjct: 250 -----------KKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTYGT 298
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L K GR A +FK+M + G P V+ ++ C+ ++ A+ I+ EM R
Sbjct: 299 FINALAKNGRISAAVKLFKKMW-ETGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDR 357
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+ Y+TLI LC + +++ + +M G P + +S
Sbjct: 358 LCQADVATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSPNNRTYS 402
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 80/146 (54%), Gaps = 3/146 (2%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+ ++ +N LI LCK + +E+ E+ D M+ + P+ ++Y+ +L+ + K+++++
Sbjct: 360 QADVATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSPNNRTYSYVLKTTEKPKDVIAL-- 417
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M+ G E D +Y +++N + + K +++ EME P F +++GL
Sbjct: 418 -MQRMEQTGCELDSDTYNLILNLYTNWKYEKGVQQVWDEMERNGSGPDQRSFTIMVHGLH 476
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPT 152
S+ +L EALQ++ K RG PE T
Sbjct: 477 SQGKLDEALQYYTTMKSRGMIPEPRT 502
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + + +N +++ ++ + Q+V+D+M++ PD +S+TI++ G Q
Sbjct: 421 MEQTGCELDSDTYNLILNLYTNWKYEKGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGK 480
Query: 61 LLSMNEVYREMKDDGFEPD 79
L + Y MK G P+
Sbjct: 481 LDEALQYYTTMKSRGMIPE 499
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 146/304 (48%), Gaps = 3/304 (0%)
Query: 4 FGLKQELPDFN--RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
F K +L F LI LCK +E+A+++F +M PDI++Y L+EG+ + +N+
Sbjct: 364 FARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNM 423
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
E+ E+K + + G ++N C A ELF+EM + KP+ I+ T+
Sbjct: 424 EKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTI 483
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+ GL E R EA++ G K +G P+ YN V+ +C + ++ + + EM G+
Sbjct: 484 VKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGL 543
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY +H +AG + A F M G P ++ +C + A
Sbjct: 544 KPNVYTYGAFIHGYCRAGEMQAAERSFIEM-LDSGIAPNDVICTDLIDGYCKDGNTTKAF 602
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ M +GVLP + +S LI+ L KL +A F E+LD G+ P +++L L
Sbjct: 603 AKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNL 662
Query: 302 RDEG 305
EG
Sbjct: 663 CKEG 666
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 2/298 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L L K VE +V+ M PD+ +YT L+ + + + V +M++
Sbjct: 202 NSLSKDLLKGNRVELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEE 260
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G P++V+Y ++I C A DEA+EL R M P +I+ TLI+G +KR +E
Sbjct: 261 KGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTE 320
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ G +P+ Y A++ + I A+++ +EM I NT TY ++H
Sbjct: 321 GKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIH 380
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K G E+A +F M+ G +P + TY ++ + ++ A + E+K +
Sbjct: 381 GLCKIGDLEKAEDLFSEMTMM-GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLT 439
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+M ++N LCH L A + FQEM+ G++P +++ + + L EG E A+
Sbjct: 440 ANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAI 497
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 4/314 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+DK GL ++ + LI LCK ++ A E+ D M K+ +P+I +Y L+ G +
Sbjct: 644 LDK-GLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGE 702
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ + + G + V+Y +I +C + EA +LF M+ P ++C
Sbjct: 703 IAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCA 762
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +AL F + G P +NA++ + ++ +AY+++++M
Sbjct: 763 LIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNH 821
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY I++ + G +EA +F M +K P V TY ++ + +
Sbjct: 822 ITPNHVTYTILIEYHCTVGNIKEAEQLFMEM-QKRNVMPNVLTYTSLLHGYNRIGRRSEM 880
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++DEM ARG+ P +S ++++ E A K +ML G+ L++ L A
Sbjct: 881 FSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDA 940
Query: 301 L-RDEGMEETAVVL 313
L + + E VL
Sbjct: 941 LCKHNNLSEVLKVL 954
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 2/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + +N LI+ LCK + +A+E+FD + ++ + +Y+ ++ G+ + N
Sbjct: 678 MCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSAN 737
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ MK G PD Y +I+ C A ++A+ LF M +P F
Sbjct: 738 LTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPA-FNA 796
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +L EA Q P TY ++ +C I +A ++ EM+K
Sbjct: 797 LIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRN 856
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY +LH + GR E +S+F M + G +P + ++V A
Sbjct: 857 VMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVAR-GIKPDDLAWSVMVDAHLKEGNWIKA 915
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+++ D+M + GV ++Y+ LI++LC + L + K E+
Sbjct: 916 LKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEV 957
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 1/283 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ +N +I CK+ +E + +M + P++ +Y + G+ + + +
Sbjct: 507 GLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAA 566
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM D G P+ V +I+ +C +A FR M P LI+G
Sbjct: 567 ERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHG 626
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +L EA+ F + +G P+ TY +++ C + A+ + D+M K GI PN
Sbjct: 627 LSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPN 686
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ L K G +A +F + K G TY ++ +C +A + A +++
Sbjct: 687 IVTYNALINGLCKLGEIAKARELFDGIPEK-GLARNSVTYSTIIAGYCKSANLTEAFQLF 745
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
MK GV P +Y LI+ C + A F M++ GI
Sbjct: 746 HGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 141/323 (43%), Gaps = 33/323 (10%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LID CK + +A F M + PD++++++L+ G + L V+ E+ D G
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PDV +Y +I+ C A EL +M P+ + LINGL +++A
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F ++G + TY+ ++ YC S + +A+++ M+ G+ P++ Y ++
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767
Query: 196 IKAGRTEEAYSVFKRM-----SRKPG----------------------------TEPTVS 222
KAG TE+A S+F M + P P
Sbjct: 768 CKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHV 827
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY I++ C + A +++ EM+ R V+P + Y++L++ + + F EM
Sbjct: 828 TYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEM 887
Query: 283 LDIGIRPPGQLFSNLKQALRDEG 305
+ GI+P +S + A EG
Sbjct: 888 VARGIKPDDLAWSVMVDAHLKEG 910
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 141/332 (42%), Gaps = 36/332 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G L ++ +I LC++ V+ A E+ M + PD Y L++G+ +QK
Sbjct: 258 MEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKR 317
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM G +PD V+Y +IN A ++ EM A K + +
Sbjct: 318 STEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYA 377
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-- 178
LI+GL L +A F + G +P+ TYN ++ Y + AY ++ E++K
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKEN 437
Query: 179 -------C--------------------------GIGPNTRTYDIVLHHLIKAGRTEEAY 205
C G+ PN Y ++ L+K GR EEA
Sbjct: 438 LTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAI 497
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ M + G P V Y V+ FC +++ EM A+G+ P ++ Y I+
Sbjct: 498 KILGVM-KDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHG 556
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
C ++ A + F EMLD GI P + ++L
Sbjct: 557 YCRAGEMQAAERSFIEMLDSGIAPNDVICTDL 588
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 138/313 (44%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + + ++ L K E A ++ MK + PD+ Y ++ G+ +
Sbjct: 468 MISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGK 527
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM G +P+V +YG I+ +C A A F EM + P+ I
Sbjct: 528 MEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTD 587
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + ++A F +G P+ T++ ++ + ++ +A + E+ G
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ +L K G + A+ + M +K G P + TY ++ C ++ A
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK-GINPNIVTYNALINGLCKLGEIAKA 706
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++D + +G+ YST+I C L +A + F M +G+ P ++ L
Sbjct: 707 RELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDG 766
Query: 301 LRDEGMEETAVVL 313
G E A+ L
Sbjct: 767 CCKAGNTEKALSL 779
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 5/314 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + LI+ C+ VE + V M+++ P++ +Y++++ G + ++ E
Sbjct: 229 VPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALE 288
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ R M + G PD Y +I+ C KR E + EM KP + LING
Sbjct: 289 LKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFV 348
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ + A Q + R + TY A++ C + A + EM GI P+ +
Sbjct: 349 KQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQ 408
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++ K E+AY + + +K +V C+ + A ++ E
Sbjct: 409 TYNCLIEGYYKVQNMEKAYELLIEI-KKENLTANAYMCGAIVNGLCHCGDLTRANELFQE 467
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG- 305
M + G+ P + +Y+T++ L E + ++A K M D G+ P ++ + G
Sbjct: 468 MISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGK 527
Query: 306 MEETAVVLAQKIDK 319
MEE L + I K
Sbjct: 528 MEEGKSYLVEMIAK 541
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 2/232 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LID CK+ + E+A +F M + ++ L++G+ + L+ ++ +M D+
Sbjct: 763 LIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNH 821
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P+ V+Y I+I HC+ EA +LF EM+ N P+ + +L++G R SE
Sbjct: 822 ITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMF 881
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + RG +P+ ++ +V A+ A +++D+M G+ Y I++ L
Sbjct: 882 SLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDAL 941
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
K E V + K G++ +++T +V F + D A+R+ + M
Sbjct: 942 CKHNNLSEVLKVLDEV-EKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 117/281 (41%), Gaps = 22/281 (7%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
Q L F+ L LC S A V ++M R +P +K L S+
Sbjct: 103 FSQNLSTFSILSLILCNSGLFGNAANVLERMIDTR-NPHVKI-------------LDSII 148
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ Y+E+ VV + I+I+ + +EAV +F + A + + C N L
Sbjct: 149 KCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVF--LGAKTNEFIVGLACC--NSL 204
Query: 126 GSEKRLSEALQFFGQSKK---RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ ++ F + K P+ TY ++ AYC ++ + ++ +M + G
Sbjct: 205 SKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCI 264
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY +V+ L +AG +EA + + M+ K G P Y ++ FC +
Sbjct: 265 PNLVTYSVVIAGLCRAGDVDEALELKRSMANK-GLLPDNYIYATLIDGFCRQKRSTEGKS 323
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+ DEM G+ P Y+ LIN + + A + +EM
Sbjct: 324 MLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMF 364
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 147/286 (51%), Gaps = 5/286 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ TLC+ + + A+ V+ +KK F P+++++ ILL GW + Y EMK
Sbjct: 183 FNALLRTLCQEKSMSDARNVYHHLKKG-FRPNLQTFNILLSGWKSSE---EAELFYEEMK 238
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G +PD+V+Y +I+ C + ++A + M + P + ++I GLG +
Sbjct: 239 ELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYTSIIGGLGLVGQPD 298
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + K+ G P+ YNAV+ YC + R++ AY +M EM G+ PN +Y++
Sbjct: 299 KARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNLFF 358
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ ++ + RM G P + ++++F + +V+MA+++W++M +G
Sbjct: 359 RVFSWSNDLRNSWDFYGRM-MDAGCLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEKGF 417
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
+ + L+ LC KL +A K F +M++ G +P F +K
Sbjct: 418 GSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSFRRIK 463
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 105/230 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ +N LID CK R +E+A V +M++ PD+ +YT ++ G G
Sbjct: 237 MKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYTSIIGGLGLVGQ 296
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +EMK+ G PDV +Y +I +C AKR D A L EME+ P+ +
Sbjct: 297 PDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNL 356
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L + F+G+ G P + ++ + ++ A ++ ++M + G
Sbjct: 357 FFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEKG 416
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
G D++L L G+ EA F +M K VS I V M
Sbjct: 417 FGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSFRRIKVLM 466
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 144/279 (51%), Gaps = 3/279 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN L+ CK+ ++ A EV ++MKK P++ +Y+ L+ G L E++ EM
Sbjct: 203 FNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEM 262
Query: 72 -KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
D PD ++Y +IN C ++ D A+++ M+ C P+ + L+NG E R
Sbjct: 263 VSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGR 322
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L EA + F + K G +P+ Y ++ +C + R+++A ++ +MR+ +T T+++
Sbjct: 323 LEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNV 382
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L L + GR EEA + +R+ + G ++Y IV+ C ++ A ++ M R
Sbjct: 383 ILGGLCREGRFEEARGMLERLPYE-GVYLNKASYRIVLNSLCREGELQKATQLVGLMLGR 441
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
GVLP + L+ LC K+ DA +L++G +P
Sbjct: 442 GVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKP 480
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 138/286 (48%), Gaps = 4/286 (1%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQE-VFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
K L + ++ L +S V+ ++ + + K +P+ + IL++ + ++ S
Sbjct: 161 KPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAF 220
Query: 66 EVYREMKDDGFE-PDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCTLIN 123
EV EMK P++++Y +IN C + R EA+ELF EM + + P + LIN
Sbjct: 221 EVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALIN 280
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G +++ AL+ KK G P Y+A++ +C R+ +A + DEM+ G+ P
Sbjct: 281 GFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKP 340
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+T Y +++ +AGR +EA + K M TV T+ +++ C + + A +
Sbjct: 341 DTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTV-TFNVILGGLCREGRFEEARGM 399
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + GV Y ++NSLC E +L A + ML G+ P
Sbjct: 400 LERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLP 445
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 122/243 (50%), Gaps = 4/243 (1%)
Query: 8 QELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
Q LPD +N LI+ C V+RA ++ + MKK +P++ +Y+ L+ G+ ++ L
Sbjct: 267 QILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEA 326
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV+ EMK G +PD V Y +IN C A R DEA+EL ++M C+ F ++ G
Sbjct: 327 KEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGG 386
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E R EA + G +Y V+ + C + A +++ M G+ P+
Sbjct: 387 LCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPH 446
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T + +L HL +AG+ +A + + G +P +++ ++V + C ++ A +
Sbjct: 447 FATSNELLVHLCEAGKVGDAVMALLGL-LELGFKPEPNSWALLVELICRERKLLPAFELL 505
Query: 245 DEM 247
D++
Sbjct: 506 DDL 508
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 145/326 (44%), Gaps = 45/326 (13%)
Query: 27 ERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+RA E+F+++ ++R F + +Y +L + K +++ V +M +E GI
Sbjct: 74 QRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMT---YETCKFHEGI 130
Query: 86 MIN--AHCSA-KRYDEAVELFREMEA-TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+N H S ++ VE+F + KPS T +N L ++ +F S
Sbjct: 131 FLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNS 190
Query: 142 KKR-GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-PNTRTYDIVLHHLIKAG 199
KK EP +N +V +C + I+ A+ +++EM+K + PN TY +++ L +G
Sbjct: 191 KKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSG 250
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI---------------- 243
R +EA +F+ M K P TY ++ FC+ +VD A++I
Sbjct: 251 RLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNY 310
Query: 244 -------------------WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+DEMK+ G+ P Y+TLIN C ++D+A + ++M +
Sbjct: 311 SALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRE 370
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETA 310
R F+ + L EG E A
Sbjct: 371 NKCRADTVTFNVILGGLCREGRFEEA 396
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 96/208 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +++ L++ CK +E A+EVFD+MK PD YT L+ + +
Sbjct: 298 MKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGR 357
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ ++M+++ D V++ +++ C R++EA + + + +
Sbjct: 358 VDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRI 417
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++N L E L +A Q G RG P T N ++ C + ++ DA + + + G
Sbjct: 418 VLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELG 477
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
P ++ +++ + + + A+ +
Sbjct: 478 FKPEPNSWALLVELICRERKLLPAFELL 505
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 157/336 (46%), Gaps = 36/336 (10%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGF 76
++ CK R + A++V +M++R + +Y +L+ G + + ++M+D G
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
PD +YG +IN C ++R +EA L EM KP+ ++ LI+G E EA +
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYC--------------------------WSMRI---- 166
+ G +P TY+ +V C +++ I
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408
Query: 167 -----NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
DA+R++ EM GI PN TY I++H L ++G E+A + + M+ K G +P
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GLKPNA 467
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
Y ++ +C V +A I+D+M VLP ++ Y++LI L +++++ KYF +
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527
Query: 282 MLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
M + G+ P +S L G E+A L Q++
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 563
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 149/359 (41%), Gaps = 36/359 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----- 55
M+ +GL + + LI+ LCKSR A+ + D+M P++ Y L++G+
Sbjct: 283 MEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGN 342
Query: 56 --------------GQQKNLLSMNEVYR----------------EMKDDGFEPDVVSYGI 85
G Q N ++ + + R +M D PD ++Y +
Sbjct: 343 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 402
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I H +A L EME P+ + + +I+GL +A + +G
Sbjct: 403 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 462
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P A Y ++ YC ++ A + D+M K + P+ Y+ ++ L K GR EE+
Sbjct: 463 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 522
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
F +M + G P TY ++ + N ++ A ++ M G+ P +Y L+ S
Sbjct: 523 KYFAQMQER-GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLES 581
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
D ++ F+ MLD G+ +++ L L G E A + I+K P
Sbjct: 582 YFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP 640
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 151/367 (41%), Gaps = 71/367 (19%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ L+ LCK ++RA + +M + PD +Y +++EG + +
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 412
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS------ 114
+ EM++ G P+V +Y IMI+ C + ++A +L EM KP+
Sbjct: 413 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 472
Query: 115 ---------------------------PHIFC--TLINGLGSEKRLSEALQFFGQSKKRG 145
P ++C +LI GL R+ E+ ++F Q ++RG
Sbjct: 473 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 532
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN--------------------- 184
P TY+ ++ Y + + A +++ M G+ PN
Sbjct: 533 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 592
Query: 185 --------------TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
R Y I++H+L +G E A+ V + K G+ P V Y ++
Sbjct: 593 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI-EKNGSVPDVHVYSSLISG 651
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C A + A I DEM +GV P + Y+ LI+ LC + A F +L G+ P
Sbjct: 652 LCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPN 711
Query: 291 GQLFSNL 297
+++L
Sbjct: 712 CVTYTSL 718
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 142/317 (44%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + LI C+ +V A E+FDKM K PD+ Y L+ G +
Sbjct: 458 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 517
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +M++ G P+ +Y +I+ + + A +L + M T KP+ I+
Sbjct: 518 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 577
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ + + F +G + Y ++ S + A+R++ + K G
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNG 637
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y ++ L K E+A+ + MS+K G +P + Y ++ C + + A
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKK-GVDPNIVCYNALIDGLCKSGDISYA 696
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ + A+G++P Y++LI+ C + +A + EML GI P ++S L
Sbjct: 697 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 756
Query: 301 LRDEGMEETAVVLAQKI 317
G E A+ L +++
Sbjct: 757 CSSAGDLEQAMFLIEEM 773
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 143/316 (45%), Gaps = 6/316 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
DK LPD +N LI L K VE + + F +M++R P+ +Y+ L+ G+ +
Sbjct: 491 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 550
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+L S ++ + M D G +P+ V Y ++ ++ + ++ F+ M I+
Sbjct: 551 GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIY 610
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LI+ L S + A + +K G P+ Y++++ C + A+ ++DEM K
Sbjct: 611 GILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSK 670
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ PN Y+ ++ L K+G A +VF + K G P TY ++ C +
Sbjct: 671 KGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK-GLVPNCVTYTSLIDGSCKVGDIS 729
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +++EM A G+ P +YS L L+ A +EM G F+NL
Sbjct: 730 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLV 788
Query: 299 QALRDEG-MEETAVVL 313
G M+ET +L
Sbjct: 789 DGFCKRGKMQETLKLL 804
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 133/299 (44%), Gaps = 18/299 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K G ++ ++ LI LCK+ E+A + D+M K+ DP+I Y L++G + +
Sbjct: 633 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 692
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ + G P+ V+Y +I+ C A L+ EM AT P ++
Sbjct: 693 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 752
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L G S L +A+ + RG ++N +V +C ++ + +++ + G
Sbjct: 753 LTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 811
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT-----------------VST 223
+ PN T + ++ L +AG+ E +++F + +K +
Sbjct: 812 LVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDV 871
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ ++R C +D A+ + D + A+ Y ++++LC + KL +A +EM
Sbjct: 872 VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 930
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 131/305 (42%), Gaps = 2/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ LI K+ +E A+++ +M P+ Y LLE + + +
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ ++ M D G D YGI+I+ S+ + A + +E P H++ +
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL +A + K+G +P YNA++ C S I+ A + + + G
Sbjct: 648 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 707
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ K G A+ ++ M G P Y ++ ++ A
Sbjct: 708 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEM-LATGITPDAFVYSVLTTGCSSAGDLEQA 766
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + +EM RG + ++ L++ C K+ + K ++ G+ P N+
Sbjct: 767 MFLIEEMFLRGHASI-SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISG 825
Query: 301 LRDEG 305
L + G
Sbjct: 826 LSEAG 830
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 115/277 (41%), Gaps = 36/277 (12%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+G + A+C + +D A ++ EM C + + LI GL + EA F +
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
G P+ TY A++ C S R N+A ++DEM + PN Y ++ ++ G +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM----------------------- 239
EA+ + K M G +P TY+ +VR C Q+D
Sbjct: 345 EAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403
Query: 240 ------------AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
A R+ EM+ G+ P ++ YS +I+ LC + + A +EM G+
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+P +++ L EG A + K+ K+ P
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 500
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 2/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + L+++ KS +E+ F M + D + Y IL+ N+ +
Sbjct: 567 GLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAA 626
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V ++ +G PDV Y +I+ C ++A + EM P+ + LI+G
Sbjct: 627 FRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDG 686
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +S A F +G P TY +++ C I++A+ + +EM GI P+
Sbjct: 687 LCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPD 746
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ AG E+A + + M + ++S++ +V FC ++ +++
Sbjct: 747 AFVYSVLTTGCSSAGDLEQAMFLIEEMFLR--GHASISSFNNLVDGFCKRGKMQETLKLL 804
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ RG++P +I+ L KL + F E+ + FS+L + ++
Sbjct: 805 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 864
Query: 305 G 305
G
Sbjct: 865 G 865
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ FN L+D CK ++ ++ + R P+ + ++ G + L ++ ++
Sbjct: 780 SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIF 839
Query: 69 REMKDDGFEP----------DVVSYGI--------MINAHCSAKRYDEAVELFREMEATN 110
E++ E D+++ G MI HC D+A+ L + A +
Sbjct: 840 VELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKS 899
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
+ +++ L + +LSEAL + KRG PT A++G + W R
Sbjct: 900 APMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG--NLQPTLVALLGIF-WFRR 951
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 148/299 (49%), Gaps = 4/299 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + +ID C +++ ++ +M+ + P++ +Y+ ++ + ++ +
Sbjct: 142 IPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEK 201
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V REM G PD V Y +I+ C A +LF EMEA P F LI GL
Sbjct: 202 VLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLS 261
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ EA + F + K+GFEP+ TY A++ YC + A+ + ++M + G+ PN
Sbjct: 262 GSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVV 321
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY + L K+G + A + M RK G + +STY +V C + A+++ +E
Sbjct: 322 TYTALADGLCKSGELDTANELLHEMCRK-GLQLNISTYNTIVNGLCKAGNILQAVKLMEE 380
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
MK G+ P Y+TL+++ ++ A + +EMLD G++P F+ L L G
Sbjct: 381 MKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSG 439
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 145/281 (51%), Gaps = 4/281 (1%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
++ +PD F+ LI L S V A ++F++M K+ F+PD +YT L++G+ + +
Sbjct: 244 REIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKK 303
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ +M G P+VV+Y + + C + D A EL EM + + + T++N
Sbjct: 304 AFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVN 363
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL + +A++ + K+ G P+ TY ++ AY + + A ++ EM G+ P
Sbjct: 364 GLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQP 423
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
T++++++ L +G+ E+ + K M K G P +TY +++ +C + ++ I
Sbjct: 424 TVVTFNVLMNGLCMSGKLEDGERLLKWMLEK-GIMPNAATYNSIMKQYCIRNNMRISTEI 482
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+ M A+GV+P + Y+ LI C + +A +EM++
Sbjct: 483 YRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVE 523
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 138/267 (51%), Gaps = 7/267 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + L D LCKS ++ A E+ +M ++ +I +Y ++ G + N
Sbjct: 311 MVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGN 370
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L ++ EMK+ G PD ++Y +++A+ +A EL REM +P+ F
Sbjct: 371 ILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNV 430
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW--SMRIN-DAYRMMDEMR 177
L+NGL +L + + ++G P A TYN+++ YC +MRI+ + YR M
Sbjct: 431 LMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQ- 489
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G+ P++ TY+I++ KA +EA+ + K M K T S+Y +++ F ++
Sbjct: 490 --GVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKR-FNLTASSYNALIKGFFKRKKL 546
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLIN 264
A ++++EM+ G++ +Y+ ++
Sbjct: 547 LEARQLFEEMRREGLVASAEIYNLFVD 573
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 151/330 (45%), Gaps = 4/330 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + + LID CK +++A + ++M + P++ +YT L +G +
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + NE+ EM G + ++ +Y ++N C A +AV+L EM+ P + T
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ + +A + + RG +P T+N ++ C S ++ D R++ M + G
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ + +++ M + G P +TY I+++ C + A
Sbjct: 456 IMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQ-GVVPDSNTYNILIKGHCKARNMKEA 514
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ EM + Y+ LI KL +A + F+EM G+ ++++
Sbjct: 515 WFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDM 574
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
+EG ET + L D+ + L+D+ +
Sbjct: 575 NYEEGNMETTLELC---DEAIEKCLLDKAR 601
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 134/299 (44%), Gaps = 2/299 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN-EVYREM 71
F+ L ++ + A++ FDK+ S + L ++++L M +V+ E
Sbjct: 42 FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEF 101
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G + SY I++N+ + EA L ME C P + T+I+G L
Sbjct: 102 PQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGEL 161
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ +Q + + +G +P TY++++ C S ++ + +++ EM K G+ P+ Y +
Sbjct: 162 QKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTL 221
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ K G T+ AY +F M + P + ++ + +V A ++++EM +G
Sbjct: 222 IDGFCKLGNTQAAYKLFSEMEARE-IVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG 280
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P Y+ LI+ C ++ A +M+ IG+ P ++ L L G +TA
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTA 339
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 11/261 (4%)
Query: 76 FEPDVVSYGIMINA-------HCSAKRYDE---AVELFREMEATNCKPSPHIFCTLINGL 125
F +++YG+ ++A C + + D +++F E + + L+N L
Sbjct: 61 FFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSL 120
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++ EA + + +G P+ +Y ++ YC + +++ EM+ G+ PN
Sbjct: 121 FRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNL 180
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY ++ L K+G+ E V + M ++ G P Y ++ FC A +++
Sbjct: 181 YTYSSIILLLCKSGKVVEGEKVLREMMKR-GVFPDHVIYTTLIDGFCKLGNTQAAYKLFS 239
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
EM+AR ++P +S LI L K+ +A K F EM+ G P ++ L G
Sbjct: 240 EMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLG 299
Query: 306 MEETAVVLAQKIDKLRKTPLV 326
+ A L ++ ++ TP V
Sbjct: 300 EMKKAFFLHNQMVQIGLTPNV 320
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR---INDAYR 171
PH+F L L+EA +FF + G A + N + C S + + +
Sbjct: 39 PHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLT--CLSSKRDMLGMVLK 96
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ E + G+ NT +Y+I+++ L + G+ EA+ + RM K G P V +Y ++ +
Sbjct: 97 VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFK-GCIPDVVSYTTIIDGY 155
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C+ ++ +++ EM+ +G+ P ++ YS++I LC K+ + K +EM+ G+ P
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDH 215
Query: 292 QLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+++ L G + A L +++ P
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVP 248
>gi|413934704|gb|AFW69255.1| hypothetical protein ZEAMMB73_056731 [Zea mays]
Length = 485
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 151/292 (51%), Gaps = 3/292 (1%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+ N L+ C V A+ +F + + PD +++ LL G+ + ++ +++ Y +
Sbjct: 166 ELNVLLRAFCARGRVAEARALFHRYCDA-YPPDTRTFNTLLLGFKEAGHVHALDLFYHDA 224
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCKPSPHIFCTLINGLGSEKR 130
GF D VSY I ++A+C R+ +A+EL EM + + KP+ +F TLI G G +
Sbjct: 225 VLRGFVADAVSYCIRMDAYCKKGRFLDALELLDEMRSKGDYKPTLQVFTTLIYGAGIVRN 284
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ A F + +K G P+ +NA++G Y + A +M +M + GIG + +Y+
Sbjct: 285 AARARALFDEMEKWGVTPDRGAHNALMGVYVRVRDLQSAMAVMSDMERKGIGLDDVSYNT 344
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L + G E + V+ +M G P T +++++FC N + D+ + +WD + R
Sbjct: 345 MLCGFQRVGDLEGIWKVYSKMVSS-GFMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGR 403
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
G +P H L+ LC + +A + F+E+++ G+ P + F+ L+ LR
Sbjct: 404 GCVPHQHALDILVTGLCCRGVVAEAYRCFREIIETGMAPTERAFTVLEGFLR 455
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 71/158 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K+G+ + N L+ + R ++ A V M+++ D SY +L G+ + +
Sbjct: 295 MEKWGVTPDRGAHNALMGVYVRVRDLQSAMAVMSDMERKGIGLDDVSYNTMLCGFQRVGD 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +VY +M GF P + +++ C R D +EL+ + C P H
Sbjct: 355 LEGIWKVYSKMVSSGFMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGRGCVPHQHALDI 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
L+ GL ++EA + F + + G P + + G
Sbjct: 415 LVTGLCCRGVVAEAYRCFREIIETGMAPTERAFTVLEG 452
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 77/185 (41%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K L F LI R+ RA+ +FD+M+K PD ++ L+ + + ++L S
Sbjct: 266 KPTLQVFTTLIYGAGIVRNAARARALFDEMEKWGVTPDRGAHNALMGVYVRVRDLQSAMA 325
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V +M+ G D VSY M+ + +++ +M ++ P L+
Sbjct: 326 VMSDMERKGIGLDDVSYNTMLCGFQRVGDLEGIWKVYSKMVSSGFMPRTRTTMLLMKVFC 385
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R L+ + RG P + +V C + +AYR E+ + G+ P R
Sbjct: 386 ENGRPDLGLELWDYLMGRGCVPHQHALDILVTGLCCRGVVAEAYRCFREIIETGMAPTER 445
Query: 187 TYDIV 191
+ ++
Sbjct: 446 AFTVL 450
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 150/308 (48%), Gaps = 2/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + F +I + ++ A + D+MK DI Y + ++ +G+
Sbjct: 224 MQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGK 283
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + E+K G PD V+Y MI C R DEAVE+F +ME P + + T
Sbjct: 284 VDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNT 343
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G GS + EA + K RG P YN ++ R+ +A R +EM+K
Sbjct: 344 MIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKK-D 402
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY++++ L KAG E A+ V M ++ G P V T I++ C ++D A
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAM-KEAGLFPNVMTVNIMIDRLCKAKKLDEA 461
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I++ M + P + +LI+ L + ++DDA + +++MLD P ++++L ++
Sbjct: 462 CSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKS 521
Query: 301 LRDEGMEE 308
G +E
Sbjct: 522 FFKCGRKE 529
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 162/349 (46%), Gaps = 37/349 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ L K + A F++MKK P++ +Y +L++ + + + +V MK
Sbjct: 376 YNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMK 434
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+V++ IMI+ C AK+ DEA +F M C P FC+LI+GLG + R+
Sbjct: 435 EAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVD 494
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKC----------- 179
+A + + Q P A Y +++ ++ R D +++ EM R C
Sbjct: 495 DAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYM 554
Query: 180 ----------------------GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
G P+ +Y I++H L+KAG E Y +F M ++ G
Sbjct: 555 DCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAM-KEQGC 613
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
Y + FC + +V+ A ++ +EMK +G P + Y ++I+ L D+LD+A
Sbjct: 614 VLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYM 673
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+E G+ ++S+L G + A ++ +++ + TP V
Sbjct: 674 LFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 722
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 153/324 (47%), Gaps = 2/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KF + + LI L + + +F +M++ ++ + +T ++ + ++
Sbjct: 189 MRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGR 248
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + EMK + D+V Y + I+ A + D A + F E+++ P + +
Sbjct: 249 LDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTS 308
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L RL EA++ F Q ++ P A YN ++ Y + + ++AY +++ + G
Sbjct: 309 MIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y+ +L L K GR EA F+ M K P +STY +++ M C +V+ A
Sbjct: 369 CIPSVIAYNCILTCLGKKGRLGEALRTFEEM--KKDAAPNLSTYNVLIDMLCKAGEVEAA 426
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ D MK G+ P + + +I+ LC KLD+AC F+ M P F +L
Sbjct: 427 FKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDG 486
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +G + A L +++ K P
Sbjct: 487 LGKQGRVDDAYRLYEQMLDSDKIP 510
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 154/324 (47%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + N +ID LCK++ ++ A +F+ M + PD ++ L++G G+Q
Sbjct: 433 MKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGR 492
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +Y +M D P+ V Y +I + R ++ ++F+EM C P +
Sbjct: 493 VDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNA 552
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + + F + K RGF P+ +Y+ ++ + + Y + M++ G
Sbjct: 553 YMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG 612
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+T Y+ + K+G+ +AY + + M K G +PTV TY V+ ++D A
Sbjct: 613 CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTK-GRQPTVVTYGSVIDGLAKIDRLDEA 671
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++E K+ G+ + +YS+LI+ ++D+A +E++ G+ P ++ L A
Sbjct: 672 YMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 731
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L A+V Q + L+ TP
Sbjct: 732 LVKAEEINEALVCFQNMKNLKGTP 755
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 147/311 (47%), Gaps = 2/311 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ ++ LI L K+ E+F MK++ D +Y ++G+ + +
Sbjct: 577 GFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKA 636
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMK G +P VV+YG +I+ R DEA LF E ++ + + I+ +LI+G
Sbjct: 637 YQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDG 696
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
G R+ EA + ++G P T+N ++ A + IN+A M+ PN
Sbjct: 697 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPN 756
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+++ L + + +A+ ++ M +K G +P TY ++ + A ++
Sbjct: 757 HITYSILINGLCRVRKFNKAFVFWQEM-QKQGLKPNTITYTTMIAGLAKAGNIAEASSLF 815
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RD 303
+ KA G +P Y+ +I L + + +A K F+E G + L AL +D
Sbjct: 816 ERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKD 875
Query: 304 EGMEETAVVLA 314
E +E+ A+V A
Sbjct: 876 ECLEQAAIVGA 886
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 108/233 (46%), Gaps = 2/233 (0%)
Query: 93 AKRYDEAVELFREME-ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
AK ++A+ FR E T+ P + +L+ + + Q G+ GF P
Sbjct: 105 AKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTK 164
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
T ++ + S ++ + + ++ MRK P Y ++ L ++ ++F +M
Sbjct: 165 TCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQM 224
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
++ G E +V + V+R+F ++D A+ + DEMK+ + + +Y+ I+ K
Sbjct: 225 -QELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGK 283
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+D A K+F E+ G+ P ++++ L + AV + +++++ R P
Sbjct: 284 VDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVP 336
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GLK + +I L K+ ++ A +F++ K PD SY ++EG +
Sbjct: 783 MQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRR 842
Query: 61 LLSMNEVYREMKDDG 75
+ +++ E + G
Sbjct: 843 AMEAYKIFEETRMKG 857
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 156/300 (52%), Gaps = 5/300 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ LID CK + RA++++ +M P++ +Y L G ++ +
Sbjct: 154 VPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQG 213
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
VY EM G PDV++Y +I+ A+++D+A ELF M + C+P+ + L++GL
Sbjct: 214 VYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLC 273
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
E + EA + F + +RG +P+ TY ++ +C +I A + DEM G P+
Sbjct: 274 KESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 333
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y+ +L +AG+ EA +F+ M + TVS + I++ ++D A+ +++
Sbjct: 334 AYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVS-HNIMIDGLSKAKRLDDAVEVFER 392
Query: 247 MKA-RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M+ G P + Y++LI LC E +L +A K F+E+ + + P F+ L +A+ G
Sbjct: 393 MEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 144/314 (45%), Gaps = 39/314 (12%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ-------QKNLLSMNE 66
+ +I LCK+ V+ A + + M KR + PD+ ++++L+ + Q+ L MN
Sbjct: 53 HSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNR 112
Query: 67 VYREMKDDGFE-------------------------------PDVVSYGIMINAHCSAKR 95
F PDVVSY I+I+ C
Sbjct: 113 TISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDE 172
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
A +L+++M NC P+ + +NGL + R+++A + + G P+ TY+
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ + + + + A+ + + M G PN TY+ +LH L K + +EA+ +F++M +
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER- 291
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G +P TY ++ FC +++ A+ ++DEM ++G P + Y+ L+ K +A
Sbjct: 292 GCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 351
Query: 276 CKYFQEMLDIGIRP 289
+ FQ M+ +P
Sbjct: 352 RQLFQVMVSRECKP 365
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 104/197 (52%), Gaps = 1/197 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N L+ LCK + A E+F KM +R DPD +YT LL G+ +
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV+ EM G +PDVV+Y ++ A + EA +LF+ M + CKP +I+G
Sbjct: 317 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDG 376
Query: 125 LGSEKRLSEALQFFGQSKK-RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L KRL +A++ F + ++ G P+ TYN+++ C R+++A ++ E+ + + P
Sbjct: 377 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 436
Query: 184 NTRTYDIVLHHLIKAGR 200
+ ++++L + AG
Sbjct: 437 DPHAFNVLLEAMYAAGH 453
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 1/214 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ ++ LI +R ++A E+F+ M R P+ +Y LL G ++
Sbjct: 218 MISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESK 277
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+E++R+M + G +PD V+Y ++ C+ + ++AVE+F EM + P +
Sbjct: 278 PDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNC 337
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-C 179
L+ G + EA Q F R +P+ ++N ++ + R++DA + + M +
Sbjct: 338 LLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDH 397
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
G P+ TY+ ++ L R EA VFK + R
Sbjct: 398 GCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDR 431
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 103/222 (46%), Gaps = 5/222 (2%)
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT---LINGLGSEKRLSEALQF 137
V++ + C + + ++A E R M+ + P T +I L R+ AL
Sbjct: 12 VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC--GIGPNTRTYDIVLHHL 195
KRG+ P+ T++ ++ C + +I +A + M + + +Y+ +L+ L
Sbjct: 72 LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSL 131
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
KA + +A+++F M + P V +Y I++ FC ++ A +++ +M +P
Sbjct: 132 CKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 191
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ Y+ +N L + ++ DA ++EM+ G P +S L
Sbjct: 192 VTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 158/314 (50%), Gaps = 3/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L D C+ + A ++ +M+K P++ + ++ G + + + E +RE +
Sbjct: 243 YNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKR 302
Query: 73 DDGFEP--DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
E + V+Y + +A D A+ELF EM +P ++ T+I+GL R
Sbjct: 303 TVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGR 362
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L +A KK GF+ +A YN ++G +C ++++AY +++EM+ G+ P+ TY+
Sbjct: 363 LLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNT 422
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L L KAG + M G +P+V T+ +V +C + D A+RI+ M
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDD-GCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEA 481
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ P +Y+TLI+ LC ++D A K F EM + + ++ L + L+D+ M E A
Sbjct: 482 RIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKA 541
Query: 311 VVLAQKIDKLRKTP 324
L ++ + R TP
Sbjct: 542 FELMDRMREERCTP 555
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 5/280 (1%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
S E A + D + PDI + LL G+ NL M E++ M+D +PDVV+
Sbjct: 109 SSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVT 168
Query: 83 YGIMINAHCSAKRYDEAVELFREMEA--TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
YGI++N C + +A+++ M + ++ P I T+++GL RL +A+ F +
Sbjct: 169 YGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDE 228
Query: 141 SKK--RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+ G P A TYN + A+C I A +++ M K G+ PN T + ++ L +
Sbjct: 229 RMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRV 288
Query: 199 GRTEEAYSVFK-RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
GR A F+ + + P TY + F + VDMAM ++ EM G P
Sbjct: 289 GRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAV 348
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
MY T+I+ L +L DAC M G + + ++ L
Sbjct: 349 MYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNIL 388
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K + +N LI C+ + + A E+ ++MK PD+ +Y LL G + +
Sbjct: 373 MKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGD 432
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++E+ M DDG +P VV++G +++ +C A + DEA+ +FR M+ +P+ I+ T
Sbjct: 433 FSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNT 492
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + + A++ F + +++ TYNA++ A+ +MD MR+
Sbjct: 493 LIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREER 552
Query: 181 IGPNTRTYDIVLHHLIKAGRTE 202
PN T D+++ L + G TE
Sbjct: 553 CTPNYVTVDVLMEWLPEIGETE 574
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 146/369 (39%), Gaps = 49/369 (13%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
D PD FN L+ L ++ ++ E+F M+ PD+ +Y ILL G +
Sbjct: 120 DSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKS 179
Query: 59 KNLLSMNEVYREMKDDGFE---------------------------------------PD 79
++ +V M G + P+
Sbjct: 180 GHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPN 239
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
V+Y + +A C A ++ ME P+ T+I GL R+ AL+FF
Sbjct: 240 AVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFF- 298
Query: 140 QSKKRGFEPE----APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+KR PE A TY+ + A+ ++ A + EM G P+ Y ++ L
Sbjct: 299 -REKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGL 357
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+AGR +A + M +K G + Y I++ FC ++ A + +EMK G+ P
Sbjct: 358 TQAGRLLDACTTAASM-KKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPD 416
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
++ Y+TL++ LC + M+D G +P F L G + A+ + +
Sbjct: 417 VYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFR 476
Query: 316 KIDKLRKTP 324
+D+ R P
Sbjct: 477 SMDEARIQP 485
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 164/369 (44%), Gaps = 52/369 (14%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS--------- 63
FN +I C V +A EVFD MKK F PD+ SY+IL++G +Q ++L+
Sbjct: 286 FNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMA 345
Query: 64 --------------------------MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD 97
E+++ +KD GF+ D + Y I+++ C +
Sbjct: 346 RNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLE 405
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+L+ +M N P + + +LI ++L EAL+ F G P T +V
Sbjct: 406 ICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILV 465
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+ I +A+ +D++R+ G+ PN TY ++++ L K + + + +F M ++ G
Sbjct: 466 HGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKR-GY 524
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P Y I++ F + A R++ +M G P + Y++LIN LCH+DKL +
Sbjct: 525 VPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMT 584
Query: 278 YFQEMLDIGIRPPGQLF----------SNLKQAL------RDEGMEETAVVLAQKIDKLR 321
F+ M+ G+ P L+ SN+K AL EG+ + V I
Sbjct: 585 LFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFS 644
Query: 322 KTPLVDRGQ 330
K +D Q
Sbjct: 645 KVLAMDGAQ 653
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 149/297 (50%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ L ++ L+ LC++ VE A E+F ++K + F D Y+I+L G Q +
Sbjct: 344 MARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLD 403
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ +M F PD +Y +I A+C ++ EA+E+F M P+
Sbjct: 404 LEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTI 463
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G +E + EA F + ++ G P TY ++ C + ND + + +M K G
Sbjct: 464 LVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRG 523
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T Y I++ +KA +EA+ ++ +M + GT+P + TY ++ C++ ++
Sbjct: 524 YVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDE-GTKPNIFTYTSLINGLCHDDKLPEV 582
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
M ++ M G+ P +Y++LI C + A + F+EM G+ +++ L
Sbjct: 583 MTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCL 639
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 154/318 (48%), Gaps = 3/318 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW--GQQKNLLSMNE 66
EL N L+ L + + + +FD MK P+I SY++L+ + G + L E
Sbjct: 175 ELQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQE 234
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM+ +G P+ +YG + C AK+ A + + + + F +I+G
Sbjct: 235 LLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFC 294
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ ++ +A++ F KK GF P+ +Y+ +V C + Y M+ EM + GI PN
Sbjct: 295 HDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLV 354
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y +LH L +AGR E A+ +FKR+ + G + Y IV+ C + +++ +W++
Sbjct: 355 SYSSLLHGLCRAGRVELAFELFKRL-KDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWND 413
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M +P + YS+LI + C +L +A + F+ M+ GI P + L +EG+
Sbjct: 414 MVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGL 473
Query: 307 EETAVVLAQKIDKLRKTP 324
A + K+ + P
Sbjct: 474 IGEAFLFLDKVRQFGVVP 491
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 102/217 (47%), Gaps = 1/217 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FG+ L + +I+ LCK +F M KR + PD Y+I+++G+ + +L
Sbjct: 486 QFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQ 545
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+Y +M D+G +P++ +Y +IN C + E + LF+ M P ++ +LI
Sbjct: 546 EAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLI 605
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ AL+ F + + G ++ Y ++G + + ++ A M+EM G+
Sbjct: 606 ACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLT 665
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
P TY ++ K G ++A ++ M + G P
Sbjct: 666 PTVVTYTDLIIGYFKIGDEKKAMVMYNSM-LQAGIAP 701
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 113/278 (40%), Gaps = 36/278 (12%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ------------- 58
+++ LI C+ R ++ A EVF+ M P++ + TIL+ G+ +
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484
Query: 59 ----------------KNLLSMNE------VYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
L +N+ ++ +M G+ PD V Y I+I+ A
Sbjct: 485 RQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDL 544
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
EA L+ +M KP+ + +LINGL + +L E + F G P+ Y ++
Sbjct: 545 QEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSL 604
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ YC + A + EM G+ ++ Y ++ K + A + M K G
Sbjct: 605 IACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNK-G 663
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
PTV TY ++ + AM +++ M G+ P
Sbjct: 664 LTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAP 701
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 9/183 (4%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ +ID K+ ++ A ++ KM P+I +YT L+ G L +
Sbjct: 525 VPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMT 584
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++ M +G PD + Y +I +C A+E+FREME ++ LI G
Sbjct: 585 LFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFS 644
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND---AYRMMDEMRKCGIGP 183
+ A F + +G P TY ++ Y +I D A M + M + GI P
Sbjct: 645 KVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGY---FKIGDEKKAMVMYNSMLQAGIAP 701
Query: 184 NTR 186
+ +
Sbjct: 702 DAK 704
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI CK +++ A E+F +M+ D YT L+ G+ + +
Sbjct: 593 GLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGA 652
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM + G P VV+Y +I + +A+ ++ M P + C L G
Sbjct: 653 QLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCIL--G 710
Query: 125 LGSE 128
LG++
Sbjct: 711 LGND 714
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 143/286 (50%), Gaps = 5/286 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G + +L F L+ +LC+ +HVE A+ +F + KK F P IKS+ I+L GW + +L
Sbjct: 212 YGFEVDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVKGSLPD 270
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ ++ +PD+ +YG IN+ A + AV+LF M P I +I+
Sbjct: 271 AKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIID 330
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +K++ EAL F + RG + + TYN ++ +C R Y ++D+M G P
Sbjct: 331 QLCFKKKIPEALDIFREMTDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSP 390
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY +L + ++ + +RM K G TY +++ ++ + ++
Sbjct: 391 NNMTYSYILK---TTEKPKDVIHLLQRME-KSGCRLDSDTYNLILNLYVSMKYENGVQQV 446
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
WDEM+ G P ++ +++ L + +LD A +Y+ M G+ P
Sbjct: 447 WDEMERNGSGPDQRSFTIMVHGLHSQGRLDQALQYYTTMKSRGMTP 492
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 130/276 (47%), Gaps = 7/276 (2%)
Query: 46 KSYTILLEGWGQQKNLLSMNEVYREMKDD--GFEPDVVSYGIMINAHCSAKRYDEAVELF 103
++YT +L+ G+ K + M +++ E+ ++ G ++ +++N + A + EA+E+F
Sbjct: 147 RTYTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTNRTFAVLLNRYAGAHKVQEAIEMF 206
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
+ + + F L+ L K + EA F Q KK F P ++N ++ +C
Sbjct: 207 YKRKDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQ-KKDEFPPVIKSWNIILNGWCVK 265
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ DA R+ +++ + P+ TY ++ L KAG+ A +F M K G P V+
Sbjct: 266 GSLPDAKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEK-GINPDVAI 324
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++ C+ ++ A+ I+ EM RG + Y+TLI C + + + +M
Sbjct: 325 CNCIIDQLCFKKKIPEALDIFREMTDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDME 384
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ G P +S + L+ + + L Q+++K
Sbjct: 385 NKGCSPNNMTYSYI---LKTTEKPKDVIHLLQRMEK 417
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ +N LI CK R E+ E+ D M+ + P+ +Y+ +L+ + K+++ +
Sbjct: 352 GCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYSYILKTTEKPKDVIHL 411
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M+ G D +Y +++N + S K + +++ EME P F +++G
Sbjct: 412 ---LQRMEKSGCRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTIMVHG 468
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
L S+ RL +ALQ++ K RG PE T
Sbjct: 469 LHSQGRLDQALQYYTTMKSRGMTPEPRT 496
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G + + +N +++ ++ Q+V+D+M++ PD +S+TI++ G Q
Sbjct: 415 MEKSGCRLDSDTYNLILNLYVSMKYENGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGR 474
Query: 61 LLSMNEVYREMKDDGFEPD 79
L + Y MK G P+
Sbjct: 475 LDQALQYYTTMKSRGMTPE 493
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 139/275 (50%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D LCK V+ A+ V M K PD+ +Y+ L++G+ L V+ M
Sbjct: 272 YNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMS 331
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV SY I+IN C K DEA+ LF+EM N P + +LI+GL R+S
Sbjct: 332 LMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIS 391
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + RG TYN+++ C + ++ A + ++M+ GI P + T+ I+L
Sbjct: 392 YVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILL 451
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR ++A F+ + K G V Y +++ C ++ A+ + +M+ G
Sbjct: 452 DGLCKGGRLKDAQEAFQDLLTK-GYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGC 510
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+P + +IN+L +D+ D A K ++M+ G+
Sbjct: 511 VPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 141/301 (46%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + + LI+ +CK A ++ K+ R P+++ Y +++ + + +
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEA 218
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G DVV+Y +I C A + EA+ L EM P+ + + L++
Sbjct: 219 YGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ EA K +P+ TY+ ++ Y + A + + M G+ P+
Sbjct: 279 LCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPD 338
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+++ K +EA ++FK M +K P + TY ++ C + ++ +
Sbjct: 339 VHSYTILINGFCKNKMVDEALNLFKEMHQK-NMVPGIVTYSSLIDGLCKSGRISYVWDLI 397
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM+ RG+ + Y++LI+ LC LD A F +M D GIRP F+ L L
Sbjct: 398 DEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKG 457
Query: 305 G 305
G
Sbjct: 458 G 458
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 52/368 (14%)
Query: 13 FNRLIDTLCKSRHVERAQ-----------------------------------EVFDKMK 37
FN+++D+ K +H A V K+
Sbjct: 62 FNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKIL 121
Query: 38 KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD 97
KR + P ++T L++G + + + ++ G + D VSYG +IN C
Sbjct: 122 KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTR 181
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
A++L R+++ KP+ ++ T+I+ L + +SEA F + +G + TY ++
Sbjct: 182 GAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLI 241
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+C + ++ +A +++EM I PN TY+I++ L K G+ +EA +V M K
Sbjct: 242 YGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVM-LKACV 300
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P V TY ++ + ++ A +++ M GV P +H Y+ LIN C +D+A
Sbjct: 301 KPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALN 360
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL----------------RDEGMEETAVVLAQKIDKLR 321
F+EM + P +S+L L RD G+ + ID L
Sbjct: 361 LFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLC 420
Query: 322 KTPLVDRG 329
K +DR
Sbjct: 421 KNGHLDRA 428
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 143/302 (47%), Gaps = 3/302 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ + LI C + ++ A + ++M + +P++ +Y IL++ ++ +
Sbjct: 229 GISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V M +PDV++Y +++ + +A +F M P H + LING
Sbjct: 289 KNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILING 348
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + EAL F + ++ P TY++++ C S RI+ + ++DEMR GI N
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPAN 408
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L K G + A ++F +M + G P T+ I++ C ++ A +
Sbjct: 409 VITYNSLIDGLCKNGHLDRAIALFNKM-KDQGIRPCSFTFTILLDGLCKGGRLKDAQEAF 467
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL--R 302
++ +G ++ Y+ +IN C + L++A +M + G P F + AL +
Sbjct: 468 QDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKK 527
Query: 303 DE 304
DE
Sbjct: 528 DE 529
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 109/211 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ + LI+ CK++ V+ A +F +M ++ P I +Y+ L++G +
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ EM+D G +V++Y +I+ C D A+ LF +M+ +P F
Sbjct: 390 ISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTI 449
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL RL +A + F +G+ + YN ++ +C + +A M+ +M + G
Sbjct: 450 LLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENG 509
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
PN T+DI+++ L K ++A + ++M
Sbjct: 510 CVPNAVTFDIIINALFKKDENDKAEKLLRQM 540
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 141/304 (46%), Gaps = 10/304 (3%)
Query: 3 KFGLKQELPDFNRLIDTLCKS---------RHVERAQEVFDKMKKRRFDPDIKSYTILLE 53
+F + +P+F+ + S ++V+ A F++M R P I + +L+
Sbjct: 8 RFSVSLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILD 67
Query: 54 GWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
+ + K+ + + ++ G +PD+++ I+IN C + + ++ +P
Sbjct: 68 SFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQP 127
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
F TLI GL + ++++AL F + +G + + +Y ++ C A +++
Sbjct: 128 HTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLV 187
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
++ PN Y+ ++ L K EAY +F M+ K G V TY ++ FC
Sbjct: 188 RKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAK-GISADVVTYTTLIYGFCI 246
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+++ A+ + +EM + + P ++ Y+ L+++LC E K+ +A ML ++P
Sbjct: 247 ASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVIT 306
Query: 294 FSNL 297
+S L
Sbjct: 307 YSTL 310
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K +K ++ ++ L+D +++AQ VF+ M PD+ SYTIL+ G+ + K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKM 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM P +V+Y +I+ C + R +L EM + + +
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNS 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L A+ F + K +G P + T+ ++ C R+ DA ++ G
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ Y+++++ K G EEA ++ +M G P T++I++ + D A
Sbjct: 475 YHLDVYKYNVMINGHCKQGLLEEALTMLSKMEEN-GCVPNAVTFDIIINALFKKDENDKA 533
Query: 241 MRIWDEMKARGVL 253
++ +M RG+L
Sbjct: 534 EKLLRQMICRGLL 546
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 76/192 (39%), Gaps = 11/192 (5%)
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F S F + P+ V +DA + M P ++ +L
Sbjct: 20 SFLQNSSHSHFHSQPPSIQNV----------DDAVSQFNRMLCMRHTPPIIQFNKILDSF 69
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K A S+ R+ K G +P + T I++ FC+ Q+ + ++ RG P
Sbjct: 70 AKIKHYSTAVSLSHRLELK-GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPH 128
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
++TLI LC + +++ A + ++L GI+ + L + G A+ L +
Sbjct: 129 TITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVR 188
Query: 316 KIDKLRKTPLVD 327
KID P V+
Sbjct: 189 KIDGRLTKPNVE 200
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 142/305 (46%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + F+ LI LC++ ER EV +M + PD++ Y +++G +++
Sbjct: 243 MVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEER 302
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + M G P+VV Y ++ CSA R++EA L EM +C F
Sbjct: 303 LEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNI 362
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + ++ Q + G P+ TY V+ +C I++A ++ M CG
Sbjct: 363 LVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACG 422
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT +Y IVL L A R +A + +M ++ G P T+ ++ C V+ A
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQ-GCPPNPVTFNTLINFLCKKGLVEQA 481
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + +M G P + YST+I+ L D+A + M+ G+ P ++S++ A
Sbjct: 482 IELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASA 541
Query: 301 LRDEG 305
L EG
Sbjct: 542 LSGEG 546
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 154/325 (47%), Gaps = 4/325 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GL + +N L+ LC + E A+ + +M + D ++ IL++ Q
Sbjct: 313 MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGL 372
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EV +M + G PDV++Y +IN C DEAV L R M A C+P+ +
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTI 432
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL S +R +A + Q ++G P T+N ++ C + A ++ +M G
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG T+EA + M +K G P Y + +++
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKK-GMSPNTIIYSSIASALSGEGRINKV 551
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++++ ++ V +Y+ +I+SLC + D A ++ M+ G P ++ L +
Sbjct: 552 IQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRG 611
Query: 301 LRDEG-MEETAVVLAQKIDK--LRK 322
L EG ++E +L + K LRK
Sbjct: 612 LASEGFVKEAQEILTELCSKGALRK 636
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 8/293 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G P ++ ++ C++ A V + R D+ + ++L+ Q
Sbjct: 137 MARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQG- 195
Query: 61 LLSMNEVYREMKDD----GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
++E R ++D G EPDVVSY ++ C A+R+ +L EM A C P+
Sbjct: 196 --PVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIV 253
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
F TLI L + Q + G P+ Y ++ C R+ A +++ M
Sbjct: 254 TFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRM 313
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ PN Y+ +L L A R EEA + M K V T+ I+V C N
Sbjct: 314 PSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDV-TFNILVDFLCQNGL 372
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
VD + + ++M G +P + Y+T+IN C E +D+A + M G RP
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRP 425
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 149/324 (45%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ FG + ++ +N ++ LC +R Q++ ++M P+I +++ L+ +
Sbjct: 208 LPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGL 267
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++EV+ +M + G PDV Y +I+ C +R + A + M + P+ + T
Sbjct: 268 FERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNT 327
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL S R EA + + + T+N +V C + ++ ++++M + G
Sbjct: 328 LLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHG 387
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY V++ K G +EA + + M+ G P +Y IV++ C + A
Sbjct: 388 CMPDVITYTTVINGFCKEGLIDEAVMLLRSMA-ACGCRPNTVSYTIVLKGLCSAERWVDA 446
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M +G P ++TLIN LC + ++ A + ++ML G P +S +
Sbjct: 447 EELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 506
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A+ L + K +P
Sbjct: 507 LGKAGNTDEALELLNVMVKKGMSP 530
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 3/228 (1%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y M+ +C R + R + P+ + + L+ L + R+++AL
Sbjct: 82 YNAMVAGYC---RAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+RG P P Y+ + A C + A ++ ++ G + ++VL + G +
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA + + + G EP V +Y V+R C + + +EM A G P + +STL
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
I LC + + +M + G P ++++ + + E E A
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVA 306
>gi|356573388|ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Glycine max]
Length = 491
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 155/319 (48%), Gaps = 2/319 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+FN L+ C R ++ A+ VF K+ R F P+ KS ILL G+ + N+ S+ Y EM
Sbjct: 164 EFNVLLKAFCTQRQMKEARSVFAKLVPR-FSPNTKSMNILLLGFKESGNVTSVELFYHEM 222
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GF PD V++ I I+A+C + +A+ L EME N P+ TLI+G G +
Sbjct: 223 VRRGFSPDGVTFNIRIDAYCKKGCFGDALRLLEEMERRNVVPTIETITTLIHGAGLVRNK 282
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A Q F + R +A YNA++ A + I A +MDEM + I ++ TY +
Sbjct: 283 DKAWQLFKEIPSRNMVADAGAYNALITALVRTRDIESASSLMDEMVEKCIELDSVTYHTM 342
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+++ E ++++M++ P T ++++ FC N ++D+++ +W + +G
Sbjct: 343 FLGFMRSRGIEGVSKLYQKMTQS-NFVPKTRTVVMLMKYFCQNYRLDLSVCLWKYLVEKG 401
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P H L+ LC + DA + ++ML+ G F L++ L +
Sbjct: 402 YCPHAHALDLLVTGLCARGLVHDAFECSKQMLERGRHMSNASFLMLERFLLQASDMDKLK 461
Query: 312 VLAQKIDKLRKTPLVDRGQ 330
L Q I KL+ RG
Sbjct: 462 ELDQMIKKLQTVLPPSRGH 480
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 117/267 (43%), Gaps = 4/267 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN ID CK A + ++M++R P I++ T L+ G G +N
Sbjct: 222 MVRRGFSPDGVTFNIRIDAYCKKGCFGDALRLLEEMERRNVVPTIETITTLIHGAGLVRN 281
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++++E+ D +Y +I A + + A L EM + + T
Sbjct: 282 KDKAWQLFKEIPSRNMVADAGAYNALITALVRTRDIESASSLMDEMVEKCIELDSVTYHT 341
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ G + + + + + + F P+ T ++ +C + R++ + + + + G
Sbjct: 342 MFLGFMRSRGIEGVSKLYQKMTQSNFVPKTRTVVMLMKYFCQNYRLDLSVCLWKYLVEKG 401
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ D+++ L G +A+ K+M + G + +++ ++ R + +D
Sbjct: 402 YCPHAHALDLLVTGLCARGLVHDAFECSKQMLER-GRHMSNASFLMLERFLLQASDMD-K 459
Query: 241 MRIWDEM--KARGVLPVMHMYSTLINS 265
++ D+M K + VLP ++T I++
Sbjct: 460 LKELDQMIKKLQTVLPPSRGHATGIST 486
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 155/304 (50%), Gaps = 2/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G++ ++ ++ LI LC A + M +R+ +P++ ++ L++ + ++
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ +++ EM +P++V+Y +IN C R DEA ++F M + +C P + T
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING K++ + ++ F +RG TY ++ + + ++A + +M G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +L L K G+ E+A VF+ + +K EP + TY I+ C +V+
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+T+I+ C + ++A F +M + G P ++ L +A
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 301 -LRD 303
LRD
Sbjct: 565 HLRD 568
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 140/282 (49%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + N L++ C + A + D+M + + PD ++T L+ G Q
Sbjct: 126 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNK 185
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G +PD+V+YG +IN C D A+ L +ME + I+ T
Sbjct: 186 ASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYST 245
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L + + +AL F + +G P+ TY++++ C R +DA R++ +M +
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T++ ++ K G+ EA +F M ++ +P + TY ++ FC + ++D A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS-IDPNIVTYNSLINGFCMHDRLDEA 364
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+I+ M ++ LP + Y+TLIN C K+ D + F++M
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 152/304 (50%), Gaps = 1/304 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +L + +I+ LCK + A + +KM+K + + D+ Y+ +++ + +++
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM + G PDV +Y +I+ C+ R+ +A L +M P+ F +LI+
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +L EA + F + +R +P TYN+++ +C R+++A ++ M P+
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ KA + + +F+ MSR+ TV TY ++ F + D A ++
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV-TYTTLIHGFFQASDCDNAQMVF 438
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M + GV P + Y+TL++ LC KL+ A F+ + + P ++ + + +
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 305 GMEE 308
G E
Sbjct: 499 GKVE 502
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 127/240 (52%), Gaps = 1/240 (0%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+++ EM P +V + +++A K++D + +ME + + + +IN L
Sbjct: 51 DLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCL 110
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+LS AL G+ K G+ P T N+++ +C RI++A ++D+M + G P+T
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T+ ++H L + + EA ++ +RM K G +P + TY V+ C + D+A+ + +
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+M+ + + +YST+I+SLC +DDA F EM + GIRP +S+L L + G
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYG 289
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 1/280 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A ++F +M K R P I ++ LL + K + +M+ G ++ +Y I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
MIN C + A+ + +M PS +L+NG R+SEA+ Q + G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++P+ T+ +V + ++A +++ M G P+ TY V++ L K G + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ +M K E V Y V+ C VD A+ ++ EM +G+ P + YS+LI+
Sbjct: 226 NLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC+ + DA + +ML+ I P F++L A EG
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEG 324
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 135/289 (46%), Gaps = 1/289 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ +F++L+ + K + + +KM+ ++ +Y I++ ++ L +
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+ P +V+ ++N C R EAV L +M +P F TL++GL
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ SEA+ + +G +P+ TY AV+ C + A ++++M K I + Y
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
V+ L K ++A ++F M K G P V TY ++ C + A R+ +M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
R + P + +++LI++ E KL +A K F EM+ I P +++L
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 36/201 (17%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N L+D LCK+ +E+A VF+ ++K + +PDI +Y I+ EG + +
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + G +PDV++Y MI+ C +EA LF +M
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM------------------ 546
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K+ G P++ TYN ++ A+ + ++ EMR C +
Sbjct: 547 -----------------KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Query: 185 TRTYDIVLHHLIKAGRTEEAY 205
TY +V ++ GR ++ +
Sbjct: 590 ASTYGLV-TDMLHDGRLDKGF 609
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 88/190 (46%), Gaps = 1/190 (0%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L EA+ FG+ K P ++ ++ A + + ++M G+ N TY+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I+++ L + + A ++ +M K G P++ T ++ FC+ ++ A+ + D+M
Sbjct: 105 IMINCLCRRSQLSFALAILGKM-MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G P ++TL++ L +K +A + M+ G +P + + L G +
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 310 AVVLAQKIDK 319
A+ L K++K
Sbjct: 224 ALNLLNKMEK 233
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 1/154 (0%)
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+++++A + EM K P+ + +L + K + + S ++M G + T
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKM-EILGVSHNLYT 102
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y I++ C +Q+ A+ I +M G P + ++L+N CH +++ +A +M+
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
++G +P F+ L L AV L +++
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 160/314 (50%), Gaps = 3/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N L+++LCK++ V +A +F M +R F PD+ SY+IL++G+ + L ++Y++M
Sbjct: 449 YNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
D P+V +Y +N R +A ++ EM A C P + TLI+G ++
Sbjct: 509 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKH 568
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A + F RG P A TYN ++ C + ++A+ + +M + G P+ TY +
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTL 628
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L+ G+ E+A VF M K G +P V Y +++ F + A +++ M +R
Sbjct: 629 LYGFCNVGKIEQAVEVFDEMVSK-GHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEM-LDIGIRPPGQLFSNLKQALRDEGMEETA 310
P ++ +I+ L +LDDA + F+ M D G P +++L L E A
Sbjct: 688 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 747
Query: 311 VVLAQKIDKLRKTP 324
+ + ++ID+L+ +P
Sbjct: 748 MKVFKEIDRLKLSP 761
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 156/297 (52%), Gaps = 5/297 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ LID CK + RA++++ +M P++ +Y L G ++ +
Sbjct: 479 VPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQG 538
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
VY EM G PDV++Y +I+ A+++D+A ELF M + C+P+ + L++GL
Sbjct: 539 VYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLC 598
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
E + EA + F + +RG +P+ TY ++ +C +I A + DEM G P+
Sbjct: 599 KESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 658
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y+ +L +AG+ EA +F+ M + TVS + I++ ++D A+ +++
Sbjct: 659 AYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS-HNIMIDGLSKAKRLDDAVEVFER 717
Query: 247 MKA-RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
M+ G P + Y++LI LC E +L +A K F+E+ + + P F+ L +A++
Sbjct: 718 MEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIK 774
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 104/196 (53%), Gaps = 2/196 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N L+ LCK + A E+F KM +R DPD +YT LL G+ +
Sbjct: 582 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQA 641
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV+ EM G +PDVV+Y ++ A + EA +LF+ M + CKP +I+G
Sbjct: 642 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDG 701
Query: 125 LGSEKRLSEALQFFGQSKK-RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L KRL +A++ F + ++ G P+ TYN+++ C R+++A ++ E+ + + P
Sbjct: 702 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSP 761
Query: 184 NTRTYDIVLHHLIKAG 199
+ ++++L IK G
Sbjct: 762 DPHAFNVLL-EAIKCG 776
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 140/317 (44%), Gaps = 46/317 (14%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
K ++ +N L+D L + R +++A +VF+KM + P+ +Y +L++ ++N
Sbjct: 125 FKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAV 184
Query: 66 EVYREMKDDGFEPDVVSY------------------------------------GIMINA 89
+ EM D GF+P Y +++N
Sbjct: 185 RFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNF 244
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
K EA +LFR M + CKP I+ ++ + L EA + F + E +
Sbjct: 245 VIQDKAI-EASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLE---MAVESK 300
Query: 150 APTYN----AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
AP N A + C S +I A+ M++ + + YD+++ LI++GR ++A
Sbjct: 301 APLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLIESGRIDKAE 359
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ + +P+ T V++ C +VD A+ + + M RG P M +S LIN
Sbjct: 360 EACLEIAGR-NIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINE 418
Query: 266 LCHEDKLDDACKYFQEM 282
LC DK+ +A ++ Q M
Sbjct: 419 LCKADKIQEAQEFLQGM 435
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 138/300 (46%), Gaps = 4/300 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDP-DIKSYTILLEGWGQQK 59
M K G K + ++ ++ CK +++ A ++F +M P + ++T L G +
Sbjct: 260 MVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSG 319
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ E R M++ V Y ++I + R D+A E E+ N +PS
Sbjct: 320 KIEQAFEACRTMQESLSSSQPV-YDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCH 378
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK- 178
++I L R+ AL KRG+ P+ T++ ++ C + +I +A + M +
Sbjct: 379 SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRK 438
Query: 179 -CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ +Y+ +L+ L KA + +A+++F M + P V +Y I++ FC ++
Sbjct: 439 ISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDEL 498
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A +++ +M +P + Y+ +N L + ++ DA ++EM+ G P +S L
Sbjct: 499 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTL 558
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 1/210 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ ++ LI +R ++A E+F+ M R P+ +Y LL G ++
Sbjct: 547 GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEA 606
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+E++R+M + G +PD V+Y ++ C+ + ++AVE+F EM + P + L+ G
Sbjct: 607 HELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 666
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-CGIGP 183
+ EA Q F R +P+ ++N ++ + R++DA + + M + G P
Sbjct: 667 FFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 726
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
+ TY+ ++ L R EA VFK + R
Sbjct: 727 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDR 756
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 133/311 (42%), Gaps = 37/311 (11%)
Query: 32 VFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHC 91
VF + ++R ++ LL + Q + ++++R M G +PD Y M+ AHC
Sbjct: 221 VFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHC 280
Query: 92 SAKRYDEAVELFREMEATNCKP-----------------------------------SPH 116
+ DEA +LF EM + P S
Sbjct: 281 KLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQP 340
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
++ LI L R+ +A + + R +P + T ++V+ C + R++ A +++ M
Sbjct: 341 VYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETM 400
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK-PGTEPTVSTYEIVVRMFCYNA 235
K G P+ T+ ++++ L KA + +EA + M RK + +Y ++ C
Sbjct: 401 IKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAK 460
Query: 236 QVDMAMRIWDEMKA-RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+V A I+ M + R +P + YS LI+ C D+L A K +++M+D+ P +
Sbjct: 461 KVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTY 520
Query: 295 SNLKQALRDEG 305
+ L +G
Sbjct: 521 NAFLNGLMRKG 531
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 1/163 (0%)
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL FF + R F+ + TYN ++ + A ++ ++M G+ PN TY +++
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
++EA F M K G +P+ + Y+ V + R++ + V
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDK-GFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRV 230
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
M + L+ + +DK +A K F+ M+ G +P ++S
Sbjct: 231 AVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYS 273
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 163/330 (49%), Gaps = 11/330 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + L++ L K+ V+ A+E+F +M+ + PD+ SY +L+ G+ + N+
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ EM ++G P+V+ Y +++ C + ++A EL EM P+ +CT+I+G
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD--EMRKCGIG 182
L+EA + F + K +G P++ Y +V C R+ND R + K G
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCA 763
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRM---SRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+T ++ +++ + K G+TE V R+ S +P TY I++ C ++
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ +M+ ++P + Y++L+N + + F E + GI P ++S +
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
A EGM A+VL +D++ VD G
Sbjct: 884 AFLKEGMTTKALVL---VDQMFAKNAVDDG 910
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI+ C+ ++V + E+ +MKKR +Y +++G +L
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +EM G P+VV Y +I R+ +A+ + +EM+ P + +LI G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L KR+ EA F + + G +P A TY A + Y + A + + EMR+CG+ PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+++ K G+ EA S ++ M + G TY +++ N +VD A I+
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM+ +G+ P + Y LIN + A F EM++ G+ P +++ L
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 305 GMEETA 310
G E A
Sbjct: 676 GEIEKA 681
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 137/279 (49%), Gaps = 1/279 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ +N LI L K++ ++ A+ +M + P+ +Y + G+ +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S ++ +EM++ G P+ V +IN +C + EA +R M +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL ++ +A + F + + +G P+ +Y ++ + + A + DEM + G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y+++L ++G E+A + MS K G P TY ++ +C + + A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK-GLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
R++DEMK +G++P +Y+TL++ C + ++ A F
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 137/324 (42%), Gaps = 36/324 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID LCK + +E A+ + +M D +Y++L++G + +N + + EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 73 DDGFE-----------------------------------PDVVSYGIMINAHCSAKRYD 97
G P +Y +I +C K
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ EL EM+ N SP+ + T++ G+ S L A + G P Y ++
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+ + R DA R++ EM++ GI P+ Y+ ++ L KA R +EA S M G
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GL 518
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P TY + + ++ A + EM+ GVLP + + LIN C + K+ +AC
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL 301
++ M+D GI + ++ L L
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGL 602
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 1/265 (0%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
+V+ A ++ + M + P +Y +L++G + K L + EM G D +Y
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
++I+ + D A L EM + P+++ I + E + +A F
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+A Y +++ YC + Y ++ EM+K I + TY V+ + +G + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
Y++ K M G P V Y +++ F N++ AMR+ EMK +G+ P + Y++LI
Sbjct: 437 YNIVKEMI-ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRP 289
L ++D+A + EM++ G++P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKP 520
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 2/260 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + I ++ A + +M++ P+ T L+ + ++ ++
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
YR M D G D +Y +++N + D+A E+FREM P + LING
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A F + + G P YN ++G +C S I A ++DEM G+ PN
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ K+G EA+ +F M K G P Y +V C V+ A+ I+
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 245 DEMKARGVLPVMHMYSTLIN 264
K +G ++ LIN
Sbjct: 756 GTNK-KGCASSTAPFNALIN 774
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 10/216 (4%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD----PDIKSYTILLEGWGQ 57
+K G FN LI+ + K E EV +++ FD P+ +Y I+++ +
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ NL + E++ +M++ P V++Y ++N + R E +F E A +P +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 118 FCTLINGLGSEKRLSEAL----QFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ +IN E ++AL Q F ++ G + T A++ + + A ++
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 173 MDEMRKCGIGPNTRTY-DIVLHHLIKAGRTEEAYSV 207
M+ M + P++ T +++ I + + EA +V
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 126/324 (38%), Gaps = 34/324 (10%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+Q+L F+ L LC E+A V ++M +R + + E W +++ ++
Sbjct: 94 EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWP--------VAEVW---SSIVRCSQ 142
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ DDG V +GI+ + + + +EAV +F P L++ L
Sbjct: 143 EFVGKSDDG-----VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL + +R + TY+ ++ A+C + + ++ + K R
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK-----EFR 252
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T + + +K K G P TY++++ C +++ A + E
Sbjct: 253 TATLNVDGALK----------LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVE 302
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M + GV H YS LI+ L D A EM+ GI ++ + EG+
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 307 EETAVVLAQKIDKLRKTPLVDRGQ 330
E A L D + + L+ + Q
Sbjct: 363 MEKAKAL---FDGMIASGLIPQAQ 383
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 153/318 (48%), Gaps = 10/318 (3%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQK 59
K G + F LI +C + A D + F D SY IL+ G G+ +
Sbjct: 73 KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETR 132
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ M ++ DVV Y +I++ C K +A L+ EM A P+ + F
Sbjct: 133 AAMQM------LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFS 186
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L++ L +++ +A+ K+G +P TY A++ YC ++N A + + M +
Sbjct: 187 ILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQE 246
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PN Y+I+++ L K R +EA ++FK M K P V TY I++ C ++
Sbjct: 247 GVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKK-INPDVVTYNILIDGLCKLGKIST 305
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
++ + DEM++ G + Y++L+++LC LD A +E+ D GI+P ++ L
Sbjct: 306 SLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLID 365
Query: 300 ALRDEGMEETAVVLAQKI 317
L +G E A V+ Q+I
Sbjct: 366 GLCKDGRLEDAYVIFQEI 383
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 152/299 (50%), Gaps = 13/299 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW------GQQKNLLSMNE 66
++ +ID+LCK + V A ++ +M + P++ +++IL++ Q NLL+M
Sbjct: 150 YSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAM-- 207
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
M G +P+VV+YG +++ +C + ++A+ +F M +P+ + +INGL
Sbjct: 208 ----MMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLC 263
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+KR+ EA+ F + + P+ TYN ++ C +I+ + ++DEMR G +
Sbjct: 264 KKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDII 323
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ +LH L K ++A ++ K + + G +P V TY ++ C + +++ A I+ E
Sbjct: 324 TYNSLLHALCKNHHLDQAITLVKEI-KDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQE 382
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ G + Y+ +IN LC + D+A M D P + + AL ++G
Sbjct: 383 ILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKG 441
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 134/262 (51%), Gaps = 1/262 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + F+ L+D LCK R ++A + M K+ P++ +Y +++G+ +
Sbjct: 177 GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKA 236
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M +G EP+V Y I+IN C KR DEA+ LF+EM P + LI+G
Sbjct: 237 LNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDG 296
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++S +L+ + + G + TYN+++ A C + ++ A ++ E++ GI PN
Sbjct: 297 LCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPN 356
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L K GR E+AY +F+ + + G TV TY +++ C D A+ +
Sbjct: 357 VCTYTTLIDGLCKDGRLEDAYVIFQEILTE-GYHITVWTYNVMINGLCKKGLFDEALALL 415
Query: 245 DEMKARGVLPVMHMYSTLINSL 266
M+ +P Y T+I +L
Sbjct: 416 SRMEDNACIPDAVSYETIIYAL 437
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 154/314 (49%), Gaps = 4/314 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + + L++ LCK A ++ ++K + D+ Y+ +++ + K +
Sbjct: 110 GFKLDQVSYAILMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDA 166
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+Y EM G P+V ++ I+++A C ++ +A+ L M KP+ + +++G
Sbjct: 167 YRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDG 226
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++++AL F + G EP YN ++ C R+++A + EM I P+
Sbjct: 227 YCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPD 286
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I++ L K G+ + + M R G + TY ++ C N +D A+ +
Sbjct: 287 VVTYNILIDGLCKLGKISTSLELVDEM-RSIGKTVDIITYNSLLHALCKNHHLDQAITLV 345
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
E+K +G+ P + Y+TLI+ LC + +L+DA FQE+L G ++ + L +
Sbjct: 346 KEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKK 405
Query: 305 GMEETAVVLAQKID 318
G+ + A+ L +++
Sbjct: 406 GLFDEALALLSRME 419
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 147/311 (47%), Gaps = 4/311 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN ++ +L K H A +F +++ P I + TIL+ + + + + ++
Sbjct: 13 FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G+EP+ +++ +I C + EA+ + A K + L+NGL
Sbjct: 73 KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETR 132
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+Q +K + Y+ ++ + C + DAYR+ EM GI PN T+ I++
Sbjct: 133 AAMQML---RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILV 189
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K + ++A ++ M +K G +P V TY ++ +C QV+ A+ I++ M GV
Sbjct: 190 DALCKDRKGKQAMNLLAMMMKK-GVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGV 248
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ +IN LC + ++D+A F+EM I P ++ L L G T++
Sbjct: 249 EPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLE 308
Query: 313 LAQKIDKLRKT 323
L ++ + KT
Sbjct: 309 LVDEMRSIGKT 319
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 1/252 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+K + + ++D C V +A +F+ M + +P++ Y I++ G ++K
Sbjct: 208 MMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKR 267
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM PDVV+Y I+I+ C + ++EL EM + + +
Sbjct: 268 VDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNS 327
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L L +A+ + K +G +P TY ++ C R+ DAY + E+ G
Sbjct: 328 LLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEG 387
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TY+++++ L K G +EA ++ RM P +YE ++ +
Sbjct: 388 YHITVWTYNVMINGLCKKGLFDEALALLSRMEDN-ACIPDAVSYETIIYALSEKGETVKT 446
Query: 241 MRIWDEMKARGV 252
++ M RG+
Sbjct: 447 NKLLCAMIVRGL 458
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P ++ + ++ + Y A+ LFR++E KPS L+N ++
Sbjct: 8 PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ K G+EP + T+ ++ C + + +A D + G + +Y I+++ L K
Sbjct: 68 LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G T A +M RK V Y ++ C V A R++ EM A+G+ P ++
Sbjct: 128 MGETRAAM----QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVY 183
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+S L+++LC + K A M+ G++P
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKKGVKP 215
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 159/326 (48%), Gaps = 7/326 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N L D LCK V+ A + D++K + D D+K YT L+ G+ Q +
Sbjct: 395 GLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEA 454
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM++ GF+PDVV+Y ++ + EA++L ME+ +P+ +I G
Sbjct: 455 QSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEG 514
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW------SMRINDAYRMMDEMRK 178
L S ++ EA +FF K E Y A+V YC S + +A+ ++ M +
Sbjct: 515 LCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLE 574
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ P+ Y + L G E A+++F + G P TY I++ +C +
Sbjct: 575 MNMKPSKVMYSKIFTALCCNGNMEGAHTLF-NLFIHTGFTPDAVTYTIMINGYCKTNCLP 633
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++ +MK RG+ P Y+ +IN C + L +A + F++M + GI+P ++ +
Sbjct: 634 EAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVII 693
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP 324
+ L + G E A L ++ + TP
Sbjct: 694 KGLLNSGHTEIAFQLYNEMIDMGMTP 719
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 151/321 (47%), Gaps = 1/321 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + I+ LCK+ + V + R +YT ++ G+ +
Sbjct: 251 MKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETK 310
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V+ EM+ G PDV Y +++ +C+++ +D+A+ +++ M + K + IF
Sbjct: 311 LDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSC 370
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ L R E + F + K+ G + YN + A C +++DA M+DE++
Sbjct: 371 ILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQ 430
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + + Y +++ G+ EA S+FK M + G +P V Y ++ F N A
Sbjct: 431 LDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEER-GFKPDVVAYNVLAAGFFRNRTDFEA 489
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + + M+++GV P + +I LC K+++A ++F + + ++++ L
Sbjct: 490 MDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNG 549
Query: 301 LRDEGMEETAVVLAQKIDKLR 321
+ + E + L + LR
Sbjct: 550 YCEAALIEKSHELKEAFILLR 570
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 139/304 (45%), Gaps = 13/304 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL ++ + L+ C SR+ ++A V+ M R + ++ +L +
Sbjct: 321 MEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGR 380
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +++ E K+ G D +Y I+ +A C + D+AV + E+++ + T
Sbjct: 381 ALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTT 440
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING + + EA F + ++RGF+P+ YN + + + +A +++ M G
Sbjct: 441 LINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQG 500
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD-- 238
+ PN+ T+ I++ L AG+ EEA F + + E +V Y +V +C A ++
Sbjct: 501 VEPNSTTHKIIIEGLCSAGKVEEAEEFFNWL-KGESVEISVEIYTALVNGYCEAALIEKS 559
Query: 239 -------MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
+ +R EM + P MYS + +LC ++ A F + G P
Sbjct: 560 HELKEAFILLRTMLEMNMK---PSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDA 616
Query: 292 QLFS 295
++
Sbjct: 617 VTYT 620
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI+ L K V+ A +F + K + +YTI+++ ++ + ++ V+ EMK
Sbjct: 193 FNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMK 252
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G + D Y I C R D + ++ N + + +I G +E +L
Sbjct: 253 EAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLD 312
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + +K+G P+ Y A+V YC S + A + M GI N + +L
Sbjct: 313 EAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCIL 372
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L + GR E +F+ ++ G Y I+ C +VD A+ + DE+K+ +
Sbjct: 373 HCLDEMGRALEVVDMFEEF-KESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQL 431
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M Y+TLIN + K +A F+EM + G +P
Sbjct: 432 DVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKP 468
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 124/260 (47%), Gaps = 7/260 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K ++ +N L ++R A ++ + M+ + +P+ ++ I++EG
Sbjct: 461 MEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGK 520
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD------EAVELFREMEATNCKPS 114
+ E + +K + E V Y ++N +C A + EA L R M N KPS
Sbjct: 521 VEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPS 580
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
++ + L + A F GF P+A TY ++ YC + + +A+ +
Sbjct: 581 KVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFK 640
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
+M++ GI P+ TY I+++ K EA+ +FK M + G +P V Y ++++ +
Sbjct: 641 DMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKER-GIKPDVIAYTVIIKGLLNS 699
Query: 235 AQVDMAMRIWDEMKARGVLP 254
++A ++++EM G+ P
Sbjct: 700 GHTEIAFQLYNEMIDMGMTP 719
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++++ LC + ++E A +F+ F PD +YTI++ G+ + L +E++++MK
Sbjct: 584 YSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMK 643
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G PD V+Y IMIN +C EA ELF++M+ KP + +I GL +
Sbjct: 644 ERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTE 703
Query: 133 EALQFFGQSKKRGFEPEA 150
A Q + + G P A
Sbjct: 704 IAFQLYNEMIDMGMTPGA 721
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 36/228 (15%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P+++S+ LIN L + AL
Sbjct: 188 PNILSFNF-----------------------------------LINRLVKHDEVDMALCL 212
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + K G TY V+ A C + R+ DEM++ G+ ++ Y + L K
Sbjct: 213 FVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCK 272
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
R++ Y+V + R Y V+R FC ++D A ++ EM+ +G++P ++
Sbjct: 273 NNRSDLGYAVLQDY-RTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVY 331
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+Y L++ C+ D A ++ M+ GI+ +FS + L + G
Sbjct: 332 VYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMG 379
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 163/330 (49%), Gaps = 11/330 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + L++ L K+ V+ A+E+F +M+ + PD+ SY +L+ G+ + N+
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ EM ++G P+V+ Y +++ C + ++A EL EM P+ +CT+I+G
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD--EMRKCGIG 182
L+EA + F + K +G P++ Y +V C R+ND R + K G
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCA 763
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRM---SRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+T ++ +++ + K G+TE V R+ S +P TY I++ C ++
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ +M+ ++P + Y++L+N + + F E + GI P ++S +
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
A EGM A+VL +D++ VD G
Sbjct: 884 AFLKEGMTTKALVL---VDQMFAKNAVDDG 910
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 141/306 (46%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI+ C+ ++V + E+ +MKKR +Y +++G +L
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +EM G P+VV Y +I R+ +A+ + +EM+ P + +LI G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L KR+ EA F + + G +P A TY A + Y + A + + EMR+CG+ PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+++ K + EA S ++ M + G TY +++ N +VD A I+
Sbjct: 557 KVLCTGLINEYCKKEKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM+ +G+ P + Y LIN + A F EM++ G+ P +++ L
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 305 GMEETA 310
G E A
Sbjct: 676 GEIEKA 681
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 138/279 (49%), Gaps = 1/279 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ +N LI L K++ ++ A+ +M + P+ +Y + G+ +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S ++ +EM++ G P+ V +IN +C ++ EA +R M +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL ++ +A + F + + +G P+ +Y ++ + + A + DEM + G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y+++L ++G E+A + MS K G P TY ++ +C + + A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK-GLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
R++DEMK +G++P +Y+TL++ C + ++ A F
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 138/324 (42%), Gaps = 36/324 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID LCK + +E A+ + +M D +Y++L++G + +N + + EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 73 DDGFE-----------------------------------PDVVSYGIMINAHCSAKRYD 97
G P +Y +I +C K
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ EL EM+ N SP+ + T++ G+ S L A + G P Y ++
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+ + R DA R++ EM++ GI P+ Y+ ++ L KA R +EA S M G
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GL 518
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P TY + + ++ A + EM+ GVLP + + LIN C ++K+ +AC
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACS 578
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL 301
++ M+D GI + ++ L L
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGL 602
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 1/265 (0%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
+V+ A ++ + M + P +Y +L++G + K L + EM G D +Y
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
++I+ + D A L EM + P+++ I + E + +A F
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+A Y +++ YC + Y ++ EM+K I + TY V+ + +G + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
Y++ K M G P V Y +++ F N++ AMR+ EMK +G+ P + Y++LI
Sbjct: 437 YNIVKEMI-ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRP 289
L ++D+A + EM++ G++P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKP 520
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 2/260 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + I ++ A + +M++ P+ T L+ + +++ ++
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEA 576
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
YR M D G D +Y +++N + D+A E+FREM P + LING
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A F + + G P YN ++G +C S I A ++DEM G+ PN
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ K+G EA+ +F M K G P Y +V C V+ A+ I+
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 245 DEMKARGVLPVMHMYSTLIN 264
K +G ++ LIN
Sbjct: 756 GTNK-KGCASSTAPFNALIN 774
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 10/216 (4%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD----PDIKSYTILLEGWGQ 57
+K G FN LI+ + K E EV +++ FD P+ +Y I+++ +
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ NL + E++ +M++ P V++Y ++N + R E +F E A +P +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 118 FCTLINGLGSEKRLSEAL----QFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ +IN E ++AL Q F ++ G + T A++ + + A ++
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 173 MDEMRKCGIGPNTRTY-DIVLHHLIKAGRTEEAYSV 207
M+ M + P++ T +++ I + + EA +V
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 126/324 (38%), Gaps = 34/324 (10%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+Q+L F+ L LC E+A V ++M +R + + E W +++ ++
Sbjct: 94 EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWP--------VAEVW---SSIVRCSQ 142
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ DDG V +GI+ + + + +EAV +F P L++ L
Sbjct: 143 EFVGKSDDG-----VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL + +R + TY+ ++ A+C + + ++ + K R
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK-----EFR 252
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T + + +K K G P TY++++ C +++ A + E
Sbjct: 253 TATLNVDGALK----------LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVE 302
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M + GV H YS LI+ L D A EM+ GI ++ + EG+
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 307 EETAVVLAQKIDKLRKTPLVDRGQ 330
E A L D + + L+ + Q
Sbjct: 363 MEKAKAL---FDGMIASGLIPQAQ 383
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 163/330 (49%), Gaps = 11/330 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + L++ L K+ V+ A+E+F +M+ + PD+ SY +L+ G+ + N+
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ EM ++G P+V+ Y +++ C + ++A EL EM P+ +CT+I+G
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD--EMRKCGIG 182
L+EA + F + K +G P++ Y +V C R+ND R + K G
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RLNDVERAITIFGTNKKGCA 763
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRM---SRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+T ++ +++ + K G+TE V R+ S +P TY I++ C ++
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEA 823
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ +M+ ++P + Y++L+N + + F E + GI P ++S +
Sbjct: 824 AKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
A EGM A+VL +D++ VD G
Sbjct: 884 AFLKEGMTTKALVL---VDQMFAKNAVDDG 910
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI+ C+ ++V + E+ +MKKR +Y +++G +L
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +EM G P+VV Y +I R+ +A+ + +EM+ P + +LI G
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L KR+ EA F + + G +P A TY A + Y + A + + EMR+CG+ PN
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+++ K G+ EA S ++ M + G TY +++ N +VD A I+
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM+ +G+ P + Y LIN + A F EM++ G+ P +++ L
Sbjct: 616 REMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRS 675
Query: 305 GMEETA 310
G E A
Sbjct: 676 GEIEKA 681
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 137/279 (49%), Gaps = 1/279 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ +N LI L K++ ++ A+ +M + P+ +Y + G+ +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S ++ +EM++ G P+ V +IN +C + EA +R M +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL ++ +A + F + + +G P+ +Y ++ + + A + DEM + G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y+++L ++G E+A + MS K G P TY ++ +C + + A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK-GLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
R++DEMK +G++P +Y+TL++ C + ++ A F
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 137/324 (42%), Gaps = 36/324 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID LCK + +E A+ + +M D +Y++L++G + +N + + EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 73 DDGFE-----------------------------------PDVVSYGIMINAHCSAKRYD 97
G P +Y +I +C K
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ EL EM+ N SP+ + T++ G+ S L A + G P Y ++
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+ + R DA R++ EM++ GI P+ Y+ ++ L KA R +EA S M G
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GL 518
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P TY + + ++ A + EM+ GVLP + + LIN C + K+ +AC
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL 301
++ M+D GI + ++ L L
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGL 602
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 1/265 (0%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
+V+ A ++ + M + P +Y +L++G + K L + EM G D +Y
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
++I+ + D A L EM + P+++ I + E + +A F
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+A Y +++ YC + Y ++ EM+K I + TY V+ + +G + A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
Y++ K M G P V Y +++ F N++ AMR+ EMK +G+ P + Y++LI
Sbjct: 437 YNIVKEMI-ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRP 289
L ++D+A + EM++ G++P
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKP 520
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 112/260 (43%), Gaps = 2/260 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + I ++ A + +M++ P+ T L+ + ++ ++
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
YR M D G D +Y +++N + D+A E+FREM P + LING
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A F + + G P YN ++G +C S I A ++DEM G+ PN
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ K+G EA+ +F M K G P Y +V C V+ A+ I+
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 245 DEMKARGVLPVMHMYSTLIN 264
K +G ++ LIN
Sbjct: 756 GTNK-KGCASSTAPFNALIN 774
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 10/216 (4%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD----PDIKSYTILLEGWGQ 57
+K G FN LI+ + K E EV +++ FD P+ +Y I+++ +
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ NL + E++ +M++ P V++Y ++N + R E +F E A +P +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 118 FCTLINGLGSEKRLSEAL----QFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ +IN E ++AL Q F ++ G + T A++ + + A ++
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 173 MDEMRKCGIGPNTRTY-DIVLHHLIKAGRTEEAYSV 207
M+ M + P++ T +++ I + + EA +V
Sbjct: 938 MENMVRLQYIPDSATVIELINESCISSNQRVEADAV 973
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 127/324 (39%), Gaps = 34/324 (10%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+Q+L F+ L LC E+A V ++M +R + + E W +++ ++
Sbjct: 94 EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWP--------VAEVW---SSIVRCSQ 142
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ DDG V +GI+ + + + + +EAV +F P L++ L
Sbjct: 143 EFVGKSDDG-----VLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL 197
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL + +R + TY+ ++ A+C + + ++ + K R
Sbjct: 198 RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK-----EFR 252
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T + + +K K G P TY++++ C +++ A + E
Sbjct: 253 TATLNVDGALK----------LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVE 302
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M + GV H YS LI+ L D A EM+ GI ++ + EG+
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362
Query: 307 EETAVVLAQKIDKLRKTPLVDRGQ 330
E A L D + + L+ + Q
Sbjct: 363 MEKAKAL---FDGMIASGLIPQAQ 383
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 161/358 (44%), Gaps = 37/358 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + + L++ +C++ E+A V D+M+ + P+I +Y +++ G ++
Sbjct: 169 MLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 228
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ + GF+PD VSY ++ C++KR+D+ ELF EM NC P+ F
Sbjct: 229 VDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 288
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + A+Q Q + G N V+ + C R++DA++++++M G
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK--PGTEPT------------------ 220
P+T +Y VL L +A R ++A + M R P E T
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 408
Query: 221 --------------VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
V TY +V FC +D A+ ++ M + P Y+TL+ L
Sbjct: 409 MLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGL 465
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
C+ ++LD A + EML P F+ L +G E A+ L +++ + TP
Sbjct: 466 CNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTP 523
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 148/307 (48%), Gaps = 4/307 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+ C+ H++ A+ + M PD +YT L+ + + + +M
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDML 170
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+VV+Y +++ A C +++A+ + EM A C P+ + +ING+ E R+
Sbjct: 171 RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 230
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + GF+P+ +Y ++ C S R +D + EM + PN T+D+++
Sbjct: 231 DARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 290
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G E A V ++M+ G + IV+ C +VD A ++ ++M + G
Sbjct: 291 RFFCRGGMVERAIQVLEQMTEH-GCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGC 349
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P Y+T++ LC ++ DDA + EM+ P F+ L +G+ E A++
Sbjct: 350 NPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 409
Query: 313 LAQKIDK 319
L +++ +
Sbjct: 410 LIEQMSE 416
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 147/324 (45%), Gaps = 5/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + E+ F+ LI C+ VERA +V ++M + + I++ +Q
Sbjct: 275 MEKNCMPNEV-TFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGR 333
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M G PD +SY ++ C A+R+D+A EL EM NC P+ F T
Sbjct: 334 VDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNT 393
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I L + + +A+ Q + G TYNA+V +C I+ A + M
Sbjct: 394 FICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP--- 450
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT TY +L L A R + A + M R P V T+ ++V FC ++ A
Sbjct: 451 CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRG-DCPPNVVTFNVLVSFFCQKGFLEEA 509
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + ++M G P + Y+TL++ + + +DA + ++ G+ P FS++
Sbjct: 510 IELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGI 569
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L E E AV L + + P
Sbjct: 570 LSKEDRIEEAVQLFHVVQDIGMRP 593
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 156/347 (44%), Gaps = 43/347 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + G N +I+++CK V+ A ++ + M +PD SYT +L+G
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368
Query: 55 WGQQKNLLSMNEVYR-------------------------------EMKDDGFEPDVVSY 83
W K LL NE+ R +M + G VV+Y
Sbjct: 369 WDDAKELL--NEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTY 426
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
++N C D A+ELFR M CKP+ + TL+ GL + +RL A + + +
Sbjct: 427 NALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLR 483
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P T+N +V +C + +A ++++M + G PN TY+ +L + K +E+
Sbjct: 484 GDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSED 543
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A + + K G P V T+ ++ + +++ A++++ ++ G+ P +Y+ ++
Sbjct: 544 ALELLHGLVSK-GVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKIL 602
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
LC ++D+A +F M+ G P + L + L EG+ + A
Sbjct: 603 LGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEA 649
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 4/253 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N L++ C H++ A E+F M + P+ +YT LL G +
Sbjct: 414 MSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAER 470
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+ EM P+VV++ ++++ C +EA+EL +M C P+ + T
Sbjct: 471 LDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNT 530
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G+ + +AL+ +G P+ T+++++G RI +A ++ ++ G
Sbjct: 531 LLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIG 590
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P Y+ +L L K + A F M G P STY I++ + + A
Sbjct: 591 MRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSN-GCMPNESTYIILIEGLAHEGLLKEA 649
Query: 241 MRIWDEMKARGVL 253
+ + +RGVL
Sbjct: 650 QDLLSVLCSRGVL 662
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P ++ LI L R S+A + ++ G + YN +V YC ++ A R+
Sbjct: 74 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 133
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ M + P+ TY ++ L GR +A S+ M R+ G +P V TY +++ C
Sbjct: 134 IGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR-GCQPNVVTYTVLLEAMC 189
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
N+ + AM + DEM+A+G P + Y+ +IN +C E ++DDA + + G +P
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTV 249
Query: 293 LFSNLKQAL 301
++ L + L
Sbjct: 250 SYTTLLKGL 258
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 169 AYRMMDEMRKC-GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
A R+++ C G P+ ++ +L + GRT +A V R + G+ V Y +
Sbjct: 59 AVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVL-RAAEGSGSPVDVFAYNTL 117
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
V +C +D A R+ M V P + Y+ LI LC ++ DA +ML G
Sbjct: 118 VAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGC 174
Query: 288 RPPGQLFSNLKQAL-RDEGMEETAVVL 313
+P ++ L +A+ R+ G E+ VL
Sbjct: 175 QPNVVTYTVLLEAMCRNSGFEQAMAVL 201
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 160/314 (50%), Gaps = 3/314 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ G++ F+ +I LCK + VF+ M ++ P++ YT+L++G+ + +
Sbjct: 300 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 359
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M D+GF+PDVV+Y +++N C R +EA++ F + + +
Sbjct: 360 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 419
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKC 179
LI+GLG R+ EA + F + ++G ++ YNA++ A+ ++++A + M +
Sbjct: 420 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 479
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G TY I+L + K R EEA ++ M K G PT + + + C + +V
Sbjct: 480 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK-GITPTAACFRALSTGLCLSGKVAR 538
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A +I DE+ GV+ + +IN+LC ++ +ACK + + G PG++ + +
Sbjct: 539 ACKILDELAPMGVI-LDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 597
Query: 300 ALRDEGMEETAVVL 313
ALR G + A+ L
Sbjct: 598 ALRKVGKADLAMKL 611
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L +N L++ L + V+ A+ VF+ M+ R PDI +Y +++G+ +
Sbjct: 195 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 254
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E R+M+ G E D ++Y MI A + + V L++EM+ + PH F
Sbjct: 255 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 314
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL E +L+E F ++G +P Y ++ Y S + DA R++ M G
Sbjct: 315 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 374
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY +V++ L K GR EEA F R G Y ++ +VD A
Sbjct: 375 FKPDVVTYSVVVNGLCKNGRVEEALDYF-HTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 433
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
R+++EM +G + Y+ LI++ K+D+A F+ M
Sbjct: 434 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 475
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 150/319 (47%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ KF + N LI + K VE V+ KMK+ +P + +Y L+ G
Sbjct: 160 IKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF 219
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S V+ M+ +PD+V+Y MI +C A + +A+E R+ME + + T
Sbjct: 220 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 279
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I ++ + + + ++G + ++ V+G C ++N+ Y + + M + G
Sbjct: 280 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 339
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN Y +++ K+G E+A + RM + G +P V TY +VV C N +V+ A
Sbjct: 340 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEA 398
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + + G+ YS+LI+ L ++D+A + F+EM + G ++ L A
Sbjct: 399 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 458
Query: 301 LRDEGMEETAVVLAQKIDK 319
+ A+ L +++++
Sbjct: 459 FTKHRKVDEAIALFKRMEE 477
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 143/298 (47%), Gaps = 1/298 (0%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
L + L+D L ++ V+R + V ++KK F + + L++ +G+ + + V
Sbjct: 132 HNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWV 191
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+R+MK++G EP + +Y ++N SA D A +F ME+ KP + T+I G
Sbjct: 192 WRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCK 251
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+ +A++ + RG E + TY ++ A + EM + GI
Sbjct: 252 AGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHA 311
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
+ +V+ L K G+ E Y+VF+ M RK G++P V+ Y +++ + + V+ A+R+ M
Sbjct: 312 FSLVIGGLCKEGKLNEGYTVFENMIRK-GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 370
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
G P + YS ++N LC ++++A YF G+ +S+L L G
Sbjct: 371 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 428
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 160/332 (48%), Gaps = 15/332 (4%)
Query: 1 MDKF-GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M+ F G + + +F L+DTLCK ++ + A EVF+K +K +++P+ K YTIL+ GW +
Sbjct: 174 MEAFVGREPDAGEFTTLLDTLCKYKYPKVATEVFNK-RKYKYEPNEKMYTILIYGWCKVN 232
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSA------KRYDEAV----ELFREMEAT 109
+ ++M D G EP+VV+Y I++N C R+D V +L +EM
Sbjct: 233 RNDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVRAAEDLLKEMRDR 292
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+P + +++ + L F K RG P TY +V+ R+ DA
Sbjct: 293 GIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 352
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG--TEPTVSTYEIV 227
R++ EM G+ P+ TY+ A ++K+M + P T P + +Y I+
Sbjct: 353 ERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKM-KAPASPTAPDIHSYHIL 411
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ MF Q +W++M V P + Y+ LI+ C +K +AC++F EM++ G
Sbjct: 412 LGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGF 471
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
P F L + L M T L +++D+
Sbjct: 472 LPQKITFEILYRGLIQADMLRTWRRLKKRVDE 503
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
A Y+AVV A + + + A+R++ E G +RT+ ++ + AG T +A F
Sbjct: 114 ADAYDAVVDALGRAHQFDAAWRLVVEAAADG-AATSRTFAVLARRYVAAGMTRQAVRAFD 172
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M G EP + ++ C +A ++++ K + P MY+ LI C
Sbjct: 173 DMEAFVGREPDAGEFTTLLDTLCKYKYPKVATEVFNKRKYK-YEPNEKMYTILIYGWCKV 231
Query: 270 DKLDDACKYFQEMLDIGIRP 289
++ D + K+ ++M+D GI P
Sbjct: 232 NRNDMSQKFLKDMIDHGIEP 251
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 150/307 (48%), Gaps = 1/307 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID LCK + V A +++ +M R P++ +Y+ L+ G+ L+ + EM
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI 212
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+V +Y I+++A C + EA L M KP+ + TL++G +
Sbjct: 213 LKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQ 272
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A Q F ++G P +YN ++ C S R+++A ++ E+ + PNT TY ++
Sbjct: 273 NAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLI 332
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K GR A + K M + G V TY ++ C N +D A ++ +MK RG+
Sbjct: 333 DGFCKLGRITSALDLLKEMYHR-GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGI 391
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ LI+ LC + +A K FQ +L G R ++ + L EGM + A+
Sbjct: 392 QPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALA 451
Query: 313 LAQKIDK 319
+ K+++
Sbjct: 452 MKSKMEE 458
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 147/292 (50%), Gaps = 10/292 (3%)
Query: 1 MDKFGLKQEL------PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTIL 51
M+ FGL E+ P+ + L+D LCK V+ A+ + M K P++ SY L
Sbjct: 202 MEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTL 261
Query: 52 LEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC 111
++G+ + + +++ M G P+V SY IMI+ C +KR DEA+ L RE+ N
Sbjct: 262 MDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNM 321
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
P+ + +LI+G R++ AL + RG + TY +++ A C + ++ A
Sbjct: 322 VPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATA 381
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ +M++ GI PN TY ++ L K GR + A +F+ + K G V TY +++
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVK-GCRINVWTYNVMISGL 440
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
C +D A+ + +M+ G +P + +I SL +D+ D A K EM+
Sbjct: 441 CKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 150/313 (47%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + L++ LCK A ++ ++ R P++ Y +++G + K +
Sbjct: 110 GFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEA 169
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y EM G P+V++Y +I C A + EA L EM N P+ + + L++
Sbjct: 170 YDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDA 229
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ EA K G +P +YN ++ YC + +A +M M + G+ PN
Sbjct: 230 LCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPN 289
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+I++ L K+ R +EA ++ + + K P TY ++ FC ++ A+ +
Sbjct: 290 VYSYNIMIDRLCKSKRVDEAMNLLREVLHK-NMVPNTVTYSSLIDGFCKLGRITSALDLL 348
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM RG + Y++L+++LC LD A F +M + GI+P ++ L L
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG 408
Query: 305 GMEETAVVLAQKI 317
G + A L Q +
Sbjct: 409 GRHKNAQKLFQHL 421
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 175/358 (48%), Gaps = 43/358 (12%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---------------- 55
+FN+++ +L K +H A +F +M+ + +PD+ + IL+ +
Sbjct: 12 EFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKI 71
Query: 56 ---GQQKNLLSMNEVYR------EMKDD----------GFEPDVVSYGIMINAHCSAKRY 96
G Q N +++N + + E+K GF+ D VSY ++N C
Sbjct: 72 LKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGET 131
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
A++L R +E + +P+ ++ T+I+GL +K ++EA + + RG P TY+ +
Sbjct: 132 RSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL 191
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ +C + ++ +A+ +++EM I PN TY I++ L K G+ +EA ++ M+ K G
Sbjct: 192 IYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT-KEG 250
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+P V +Y ++ +C +V A +++ M +GV P ++ Y+ +I+ LC ++D+A
Sbjct: 251 VKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAM 310
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL-------AQKIDKLRKTPLVD 327
+E+L + P +S+L G +A+ L Q D + T L+D
Sbjct: 311 NLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLD 368
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 106/210 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +ID LCKS+ V+ A + ++ + P+ +Y+ L++G+ + + S
Sbjct: 285 GVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSA 344
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +EM G DVV+Y +++A C + D+A LF +M+ +P+ + + LI+G
Sbjct: 345 LDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDG 404
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R A + F +G TYN ++ C +++A M +M + G P+
Sbjct: 405 LCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPD 464
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
T++I++ L + + ++A + M K
Sbjct: 465 AVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 40 RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
R P I + ++ + K+ + ++++M+ G EPD+ + I+IN C + +
Sbjct: 5 RDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFS 64
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
+ ++ +P+ TL+ GL + + ++L F + +GF+ + +Y ++
Sbjct: 65 FTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNG 124
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
C A +++ + PN Y+ ++ L K EAY ++ M + G P
Sbjct: 125 LCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR-GIFP 183
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY ++ FC Q+ A + +EM + + P ++ Y+ L+++LC E K+ +A
Sbjct: 184 NVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL 243
Query: 280 QEMLDIGIRP 289
M G++P
Sbjct: 244 AVMTKEGVKP 253
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P ++ ++ L+K A S+FK+M K G EP + T I++ FC+ Q+ +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVK-GIEPDLFTLNILINCFCHLGQMTFSFT 66
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ ++ G P +TL+ LC + ++ + + +++ G + ++ L L
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126
Query: 303 DEGMEETAVVLAQKIDKLRKTPLV 326
G +A+ L + I+ P V
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNV 150
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + LID LCK + AQ++F + + ++ +Y +++ G ++
Sbjct: 386 MKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGM 445
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA 108
L + +M+++G PD V++ I+I + + D+A +L EM A
Sbjct: 446 LDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIA 493
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 1/301 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ +LC+++ E A+ VF M + P++ SY+IL+ G + + + E+ EM
Sbjct: 55 YGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G +P+VV+YG +++ C + EAV+LF M C P ++ LI+G + +
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + ++G P TYN+++ + + +M + G PN T++ +L
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G EA+ +F M R G P V +Y ++R C + A R+ EM GV
Sbjct: 235 DGFCKMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGV 293
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ LI+ LD A K F E+ G+ P +S + L G A V
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFV 353
Query: 313 L 313
+
Sbjct: 354 V 354
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 147/312 (47%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L++ L KS + ++ M P+ +Y LL Q + V+R M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V SY I+I C ++ DEA EL EM +P+ + +L++GL +L
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ F + RG P+ YN ++ + + +AYR+ +EM + G P TY+ +L
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G S+FK M R+ G P + T+ ++ FC + A R++ EM++ G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQ-GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+TLI +C + K +A + +EM+ G+ P ++ L G + A+
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318
Query: 313 LAQKIDKLRKTP 324
L +I K P
Sbjct: 319 LFYEIPKSGLEP 330
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 139/285 (48%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + L+ LCK ++ A ++F +M R PD Y +L++G+ ++ ++
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM + G P V +Y +++ + LF++M C P+ F L++G
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EA + F + + G P+ +YN ++ C + ++A R++ EM + G+GP+
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+I++ K+G + A +F + K G EP +Y ++ C +V A ++
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIP-KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M A G P + L+ LC ++L ++C+ FQ M+ P
Sbjct: 356 KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 150/323 (46%), Gaps = 3/323 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ LI LC+ + V+ A E+ ++M P++ +Y LL G + L
Sbjct: 82 GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEA 141
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M G PD V Y ++I+ EA LF EM C P+ + +L++G
Sbjct: 142 VDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ F ++G P T+N ++ +C + +A+R+ EMR G P+
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ ++ + G+ EA + + M R G P + +Y I++ + + +D A++++
Sbjct: 262 VVSYNTLIRGMCSKGKPHEAQRLLREMIRS-GVGPDIVSYNILIDGYSKSGALDHAIKLF 320
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RD 303
E+ G+ P YST+I+ LC K+ A F++M+ G P + L L R
Sbjct: 321 YEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380
Query: 304 EGMEETAVVLAQKIDKLRKTPLV 326
E + E+ L Q + K PL+
Sbjct: 381 ERLTESC-ELFQAMVKFECVPLI 402
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 141/290 (48%), Gaps = 1/290 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID K + A +F++M ++ P + +Y LL G+ ++ + ++++M
Sbjct: 160 YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDML 219
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P++ ++ +++ C EA LF EM + C P + TLI G+ S+ +
Sbjct: 220 RQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPH 279
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + + G P+ +YN ++ Y S ++ A ++ E+ K G+ P+ +Y ++
Sbjct: 280 EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L +AG+ A+ VFK M G+ P + +V C ++ + ++ M
Sbjct: 340 DCLCRAGKVGAAFVVFKDMIAN-GSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFEC 398
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+P++ Y+ L+ LC + DD C+ F E+ + G P ++ + + LR
Sbjct: 399 VPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLR 448
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
SY LLE + + Y +M G P+ +YG ++ + C A+R++EA +FR M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
A C P+ + LI GL +++ EA + + G +P TY +++ C ++
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A + M G P+ Y++++ K G EAY +F+ M K G PTV TY
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCIPTVFTYNS 197
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ F + ++ +M +G +P + ++ L++ C + +A + F EM +G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 287 IRPPGQLFSNLKQALRDEG 305
P ++ L + + +G
Sbjct: 258 CPPDVVSYNTLIRGMCSKG 276
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 1/217 (0%)
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
+SY ++ + R D + +M A C P+ + + L+ L +R EA F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
+G P +Y+ ++ C ++++A +++EM G PN TY +L L K G+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
+EA +F RM + G P Y +++ F + A R+++EM +G +P + Y+
Sbjct: 138 LKEAVDLFSRMVYR-GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+L++ + + F++ML G P F+NL
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNL 233
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N LI +C AQ + +M + PDI SY IL++G+ +
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ E+ G EPD SY +I+ C A + A +F++M A P +
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL +RL+E+ + F K P P YN ++ C + R +D + E+ + G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Query: 181 IGPNTRTYDIVLHHL 195
P+ ++L L
Sbjct: 433 FSPDVEISKVILETL 447
>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g02420
gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 165/320 (51%), Gaps = 15/320 (4%)
Query: 6 LKQELPDF------NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
K+ +PDF N L+ TLC+ + + A+ V+ +K +F PD++++ ILL GW K
Sbjct: 170 FKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNILLSGW---K 225
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + EMK G +PDVV+Y +I+ +C + ++A +L +M P +
Sbjct: 226 SSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYT 285
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+I GLG + +A + + K+ G P+ YNA + +C + R+ DA +++DEM K
Sbjct: 286 TVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE--PTVSTYEIVVRMFCYNAQV 237
G+ PN TY++ L A ++ ++ RM G E P + +++MF + +V
Sbjct: 346 GLSPNATTYNLFFRVLSLANDLGRSWELYVRM---LGNECLPNTQSCMFLIKMFKRHEKV 402
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
DMAMR+W++M +G + L++ LC K+++A K EM++ G RP F +
Sbjct: 403 DMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Query: 298 KQALRDEGMEETAVVLAQKI 317
K + + L QK+
Sbjct: 463 KLLMELANKHDEVNNLIQKM 482
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 96/243 (39%), Gaps = 35/243 (14%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERA----------------------------------- 29
GLK ++ +N LID CK R +E+A
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 30 QEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINA 89
+EV +MK+ PD+ +Y + + + L +++ EM G P+ +Y +
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
A + EL+ M C P+ LI +++ A++ + +GF
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSY 420
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+ + ++ C ++ +A + + EM + G P+ ++ + + A + +E ++ +
Sbjct: 421 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQ 480
Query: 210 RMS 212
+M+
Sbjct: 481 KMA 483
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN K +++A ++F+KM++ PD SY L++ + + + +M
Sbjct: 33 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI 92
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G P++V + ++ CS ++++ ELF EM P+ F T++ L E R+
Sbjct: 93 NEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 152
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + + G P+ +YN ++ +C + I++A ++++ M G+ PN+ +Y+ +L
Sbjct: 153 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLL 212
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H KAGR + AYS+F++M G P V TY ++ + A ++ M G
Sbjct: 213 HGYCKAGRIDSAYSLFRKMLSN-GITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 271
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
++ Y+T++N LC + +D+A K FQ + G++ F+ + AL G +E A+
Sbjct: 272 KWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 331
Query: 313 LAQKI 317
L I
Sbjct: 332 LFAAI 336
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + FN ++ LCK V Q + D ++ PD+ SY L++G
Sbjct: 126 MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT 185
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ M G +P+ SY +++ +C A R D A LFR+M + P + T
Sbjct: 186 IDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNT 245
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL KR SEA + + G + TYN ++ C S +++A++M + G
Sbjct: 246 ILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKG 305
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N T+ I++ L+K GR E+A +F + G P V TY +V ++
Sbjct: 306 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN-GLVPDVVTYRVVAENLIEEGSLEEF 364
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ M+ G P M + L+ L H + A Y ++
Sbjct: 365 DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 406
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LID LCK V+ A+ F++M P+I ++ L+ G
Sbjct: 56 MRQHGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDK 115
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ EM + G P++V + ++ C R E L +E +P + T
Sbjct: 116 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 175
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + EA + G +P + +YN ++ YC + RI+ AY + +M G
Sbjct: 176 LIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNG 235
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY+ +LH L + R EA ++ M GT+ + TY ++ C + VD A
Sbjct: 236 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMINS-GTKWGIYTYNTILNGLCKSNCVDEA 294
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ + ++G+ + ++ +I +L + +DA F + G+ P + + +
Sbjct: 295 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAEN 354
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +EG E L ++K P
Sbjct: 355 LIEEGSLEEFDSLFSAMEKNGTAP 378
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 1/251 (0%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
+L G+G + L M+++ M +G P+ + I +A+ D+A+++F +M
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
P + LI+ L R+ +A F Q G P ++++V C +
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ EM GI PN ++ +L +L K GR E + + G P V +Y ++
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSI-ECMGVRPDVISYNTLIDG 179
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C +D A ++ + M + G+ P Y+TL++ C ++D A F++ML GI P
Sbjct: 180 HCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPG 239
Query: 291 GQLFSNLKQAL 301
++ + L
Sbjct: 240 VVTYNTILHGL 250
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 96/231 (41%), Gaps = 1/231 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK +N L+ CK+ ++ A +F KM P + +Y +L G Q K
Sbjct: 196 MVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKR 255
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y M + G + + +Y ++N C + DEA ++F+ + + + + F
Sbjct: 256 FSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 315
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L R +A+ F G P+ TY V + + + M K G
Sbjct: 316 MIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNG 375
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
PN++ + ++ L+ G A + ++ + ST +++ +F
Sbjct: 376 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER-NFSVEASTTSMLISIF 425
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 160/314 (50%), Gaps = 3/314 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ G++ F+ +I LCK + VF+ M ++ P++ YT+L++G+ + +
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M D+GF+PDVV+Y +++N C R +EA++ F + + +
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKC 179
LI+GLG R+ EA + F + ++G ++ YNA++ A+ ++++A + M +
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G TY I+L + K R EEA ++ M K G PT + + + C + +V
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK-GITPTAACFRALSTGLCLSGKVAR 556
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A +I DE+ GV+ + +IN+LC ++ +ACK + + G PG++ + +
Sbjct: 557 ACKILDELAPMGVI-LDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615
Query: 300 ALRDEGMEETAVVL 313
ALR G + A+ L
Sbjct: 616 ALRKVGKADLAMKL 629
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L +N L++ L + V+ A+ VF+ M+ R PDI +Y +++G+ +
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQ 272
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E R+M+ G E D ++Y MI A + + V L++EM+ + PH F
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL E +L+E F ++G +P Y ++ Y S + DA R++ M G
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY +V++ L K GR EEA F R G Y ++ +VD A
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYF-HTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
R+++EM +G + Y+ LI++ K+D+A F+ M
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 150/319 (47%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ KF + N LI + K VE V+ KMK+ +P + +Y L+ G
Sbjct: 178 IKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF 237
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S V+ M+ +PD+V+Y MI +C A + +A+E R+ME + + T
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I ++ + + + ++G + ++ V+G C ++N+ Y + + M + G
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN Y +++ K+G E+A + RM + G +P V TY +VV C N +V+ A
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVVNGLCKNGRVEEA 416
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + + G+ YS+LI+ L ++D+A + F+EM + G ++ L A
Sbjct: 417 LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476
Query: 301 LRDEGMEETAVVLAQKIDK 319
+ A+ L +++++
Sbjct: 477 FTKHRKVDEAIALFKRMEE 495
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 141/290 (48%), Gaps = 1/290 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+D L ++ V+R + V ++KK F + + L++ +G+ + + V+R+MK++G
Sbjct: 158 LVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
EP + +Y ++N SA D A +F ME+ KP + T+I G + +A+
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + RG E + TY ++ A + EM + GI + +V+ L
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G+ E Y+VF+ M RK G++P V+ Y +++ + + V+ A+R+ M G P
Sbjct: 338 CKEGKLNEGYTVFENMIRK-GSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ YS ++N LC ++++A YF G+ +S+L L G
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 145/302 (48%), Gaps = 6/302 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ +L ++ L+ L S + A +F M PDI +Y +L++G+ +
Sbjct: 167 MKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQ 223
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E+ G+EP+V +Y I+IN +C + +EA E+F +M +NC P+ F T
Sbjct: 224 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 283
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM-RINDAYRMMDEMRKC 179
LI G L +A++ F + +K G + TYN ++ + C + A + +++
Sbjct: 284 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 343
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P TY+ ++ A R EA F M K P V TY I++ C ++
Sbjct: 344 GLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK--CAPNVITYSILIDGLCKVRRMKE 401
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + ++MKA G P + Y LIN C +L A +F++M G P +F+ L
Sbjct: 402 AAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLID 461
Query: 300 AL 301
L
Sbjct: 462 GL 463
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 8/311 (2%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ L +R ++A +F ++ F P+ +Y +L+ G+ + + V+ +MK
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G P+ + ++ C + A++LFREM+A P+ L+ G R+ +
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCW----SMRINDAYRMMDEMRKCGIGPNTRTYD 189
AL +K TYN V+ CW + R+ A EM+ G+ P+ +Y
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I+L L +GR EA+++F M+ P + TY +++ +C Q A + E+
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT----CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G P + YS +IN C DK+++A + F +M++ P F+ L GM E
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 296
Query: 310 AVVLAQKIDKL 320
A+ L +++K+
Sbjct: 297 AIKLFAEMEKI 307
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 6/246 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M+K G K + +N LID+LCK R V A ++F+K++ P I +Y L++G+ +
Sbjct: 304 MEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDAR 363
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L + + EM+ P+V++Y I+I+ C +R EA + +M+A P+ +
Sbjct: 364 RLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYG 422
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LING L AL FF + K G P +N ++ C + R ND R++ M
Sbjct: 423 GLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAE 482
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ TY+ ++ L A R E+A +F M+ P V+T+ ++R C +V+
Sbjct: 483 GCKPDVITYNCLISGLCSANRVEDAQRLFDGMA----CAPNVTTFNFLIRGLCAQKKVEE 538
Query: 240 AMRIWD 245
A I D
Sbjct: 539 ARNILD 544
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 145/308 (47%), Gaps = 9/308 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL N L+ LC+ + A ++F +M+ F P S+ ILL G+
Sbjct: 58 MKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR 117
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHC----SAKRYDEAVELFREMEATNCKPSPH 116
+ ++M+ +Y +++ C SA R ++A+E F+EM+A+ +P
Sbjct: 118 VRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLE 177
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ L++ L R++EA F P+ TYN ++ YC + +A +M E+
Sbjct: 178 SYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
K G PN TY I+++ K + EEA+ VF +M + P T+ ++ FC
Sbjct: 235 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI-ESNCVPNAVTFNTLIAGFCKAGM 293
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE-DKLDDACKYFQEMLDIGIRPPGQLFS 295
++ A++++ EM+ G + Y+TLI+SLC + + A F ++ G+ P ++
Sbjct: 294 LEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353
Query: 296 NLKQALRD 303
+L Q D
Sbjct: 354 SLIQGFCD 361
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 153/310 (49%), Gaps = 7/310 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
F L+D+LCK HV A + FD+ ++ + P ++ Y ILL GW + + L ++ E
Sbjct: 227 FEILLDSLCKEGHVRVATDYFDRKVEKDPCWVPSVRIYNILLNGWFRSRKLKHAERLWLE 286
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
MK +P VV+YG ++ + +R + A+EL EM+ K + ++ +I+ L R
Sbjct: 287 MKKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGR 346
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
E L P TYN++V YC + + A +++ M + P TY+
Sbjct: 347 FKEVLGMMEHFFLCEEGPTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNY 406
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
H K + EE +++ +M + G P TY ++++M C ++D+A++I EM+AR
Sbjct: 407 FFRHFSKCRKIEEGMNLYTKMI-ESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMRAR 465
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G + + + LC + ++A F++ML GI P F L R +G+ E
Sbjct: 466 GCDMDLATSTMFTHLLCKMQRFEEAFAEFEDMLRRGIVPQYLTFHRLNDEFRKQGLTE-- 523
Query: 311 VVLAQKIDKL 320
LA+++ KL
Sbjct: 524 --LARRLCKL 531
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 23/278 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M K +K + + L++ + R VERA E+ D+MK+ + Y +++ G+
Sbjct: 287 MKKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIIDALAEAGR 346
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K +L M E + + ++G P + +Y ++ +C A A ++ + M + P+P
Sbjct: 347 FKEVLGMMEHFF-LCEEG--PTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTT 403
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +++ E + + + + G+ P+ TY+ ++ C R++ A ++ EMR
Sbjct: 404 YNYFFRHFSKCRKIEEGMNLYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMR 463
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G + T + H L K R EEA++ F+ M R+ G P T+
Sbjct: 464 ARGCDMDLATSTMFTHLLCKMQRFEEAFAEFEDMLRR-GIVPQYLTFH------------ 510
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
R+ DE + +G+ + L++S+ H L +
Sbjct: 511 ----RLNDEFRKQGLTELARRLCKLMSSVSHSKNLPNT 544
>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 165/320 (51%), Gaps = 15/320 (4%)
Query: 6 LKQELPDF------NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
K+ +PDF N L+ TLC+ + + A+ V+ +K +F PD++++ ILL GW K
Sbjct: 169 FKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNILLSGW---K 224
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + EMK G +PDVV+Y +I+ +C + ++A +L +M P +
Sbjct: 225 SSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYT 284
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+I GLG + +A + + K+ G P+ YNA + +C + R+ DA +++DEM K
Sbjct: 285 TVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 344
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE--PTVSTYEIVVRMFCYNAQV 237
G+ PN TY++ L A ++ ++ RM G E P + +++MF + +V
Sbjct: 345 GLSPNATTYNLFFRVLSLANDLGRSWELYVRM---LGNECLPNTQSCMFLIKMFKRHEKV 401
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
DMAMR+W++M +G + L++ LC K+++A K EM++ G RP F +
Sbjct: 402 DMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 461
Query: 298 KQALRDEGMEETAVVLAQKI 317
K + + L QK+
Sbjct: 462 KLLMELANKHDEVNNLIQKM 481
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/243 (18%), Positives = 96/243 (39%), Gaps = 35/243 (14%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERA----------------------------------- 29
GLK ++ +N LID CK R +E+A
Sbjct: 240 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 299
Query: 30 QEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINA 89
+EV +MK+ PD+ +Y + + + L +++ EM G P+ +Y +
Sbjct: 300 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 359
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
A + EL+ M C P+ LI +++ A++ + +GF
Sbjct: 360 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSY 419
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+ + ++ C ++ +A + + EM + G P+ ++ + + A + +E ++ +
Sbjct: 420 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQ 479
Query: 210 RMS 212
+M+
Sbjct: 480 KMA 482
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 152/289 (52%), Gaps = 5/289 (1%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
K+ HV A+++ ++++ R ++ YT LL GW + L V MK PDVV
Sbjct: 173 KTGHVAVAEQLVEELQPR-LPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVV 231
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+ ++ + R+++A EL REME C P+ + TL+ GLG+ R+ EA++ F +
Sbjct: 232 VFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEM 291
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+++G P++ TY +V A+C + RI+ Y +D M + G+ + Y K +
Sbjct: 292 RRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQL 351
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EE + +RM R+ P +S Y +V+R+ C + A+ +W+EM+ + P + ++
Sbjct: 352 EECLELMERM-RECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAI 410
Query: 262 LINSLCHEDKLDDACKYFQEMLDIG--IRPPGQLFSNLKQAL-RDEGME 307
++ L + L +AC YF++M+ G + P + +L +L RD+ +E
Sbjct: 411 MVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLE 459
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 144/352 (40%), Gaps = 38/352 (10%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L L + L+ C+ ++ A+ V +MK PD+ + LL G+
Sbjct: 191 LPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAF 250
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E+ REM+ G P+ VSY ++ + R DEA+ +F EM C P + TL+
Sbjct: 251 ELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAF 310
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+S+ +F + G +A Y A+ ++ + +M+ MR+C P+
Sbjct: 311 CKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDL 370
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
Y++V+ K G T++A +++ M P V T+ I+V + A +
Sbjct: 371 SIYNVVIRLACKLGETKQAVALWNEMETNE-LSPGVDTFAIMVTGLVGQGVLVEACGYFK 429
Query: 246 EMKARG--VLPVMHMYSTLINSLCHEDKLD------------------------------ 273
+M RG V P + L+NSL + KL+
Sbjct: 430 DMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNFGAWTIWIHALYA 489
Query: 274 -----DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+AC Y +MLD G+ P F+ L + L+ + A + +K+ K+
Sbjct: 490 KKHVKEACMYCLDMLDAGLMPQPDTFAKLMKGLKKLYNRQIAAEITEKVRKM 541
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 85/183 (46%), Gaps = 5/183 (2%)
Query: 146 FEPEAPT----YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+P P Y A++ +C ++++A ++ M+ + P+ ++ +L + GR
Sbjct: 187 LQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRF 246
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
E+A+ + + M R+ G P +Y +++ +VD AMR++ EM+ +G P Y T
Sbjct: 247 EDAFELAREMERR-GCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGT 305
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
L+ + C ++ ++ M G+R ++ A + E + L +++ + R
Sbjct: 306 LVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECR 365
Query: 322 KTP 324
P
Sbjct: 366 CPP 368
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 1/156 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + L+ CK+ + + E D M + D Y +++
Sbjct: 291 MRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQ 350
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+ M++ PD+ Y ++I C +AV L+ EME P F
Sbjct: 351 LEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAI 410
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
++ GL + L EA +F RG AP Y +
Sbjct: 411 MVTGLVGQGVLVEACGYFKDMVGRGLFV-APQYGVL 445
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 145/296 (48%), Gaps = 5/296 (1%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
E+ FN L+D LCK E A+ +F ++K + PD +Y ++ GW + +N +V
Sbjct: 137 EINAFNLLLDALCKCCLAEDAEGLFKRVKNK-VKPDANTYNVMFFGWCRVRNPTRGMKVL 195
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME---ATNCKPSPHIFCTLINGL 125
EM G PD +Y I+A C A +EA ELF M +T P+ + +I L
Sbjct: 196 EEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGAL 255
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+ E + G P+ T+ ++ C + +I++AYR + EM G P+
Sbjct: 256 VRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDI 315
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ L L + +EEA +++RM + G P+V T+ +++ MF D A W
Sbjct: 316 VTYNCFLKVLCENKNSEEALRLYERMI-EAGCFPSVQTHNMLISMFFEMGDPDGAFETWY 374
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM RG + Y +I+ L +K++DAC +++++ G++ P Q F + L
Sbjct: 375 EMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQL 430
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 117/246 (47%), Gaps = 5/246 (2%)
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
+P++ ++ ++++A C ++A LF+ ++ KP + + + G + + ++
Sbjct: 135 QPEINAFNLLLDALCKCCLAEDAEGLFKRVK-NKVKPDANTYNVMFFGWCRVRNPTRGMK 193
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG---IGPNTRTYDIVLH 193
+ + G P++ TY + A+C + +N+A + + MR G P +TY I++
Sbjct: 194 VLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIG 253
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L++ R +E + + + M G P VST++ ++ C ++D A R EM +G
Sbjct: 254 ALVRNNRMDECFKLLEDMI-NSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYP 312
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y+ + LC ++A + ++ M++ G P Q + L + G + A
Sbjct: 313 PDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFET 372
Query: 314 AQKIDK 319
++DK
Sbjct: 373 WYEMDK 378
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 5/229 (2%)
Query: 93 AKRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
++Y V+ F + + K P I F L++ L +A F + K + +P+A
Sbjct: 114 TEKYLTRVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLAEDAEGLFKRVKNK-VKPDA 172
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
TYN + +C ++++EM + G P++ TY + +AG EA +F+
Sbjct: 173 NTYNVMFFGWCRVRNPTRGMKVLEEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEF 232
Query: 211 MSRKPGT--EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K T PT TY I++ N ++D ++ ++M G LP + + LI +C
Sbjct: 233 MRTKGSTMSSPTAKTYAIMIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCS 292
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
K+D+A ++ QEM + G P ++ + L + E A+ L +++
Sbjct: 293 AGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEEALRLYERM 341
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 82/196 (41%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+I L ++ ++ ++ + M PD+ ++ L+EG + +EM + G
Sbjct: 251 MIGALVRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKG 310
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+ PD+V+Y + C K +EA+ L+ M C PS LI+ A
Sbjct: 311 YPPDIVTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAF 370
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + + KRG + TY ++ ++ DA +++++ G+ + +D L L
Sbjct: 371 ETWYEMDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQL 430
Query: 196 IKAGRTEEAYSVFKRM 211
G + + + M
Sbjct: 431 SVIGNIRAIHRLSEHM 446
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD F LI+ +C + ++ A +M + + PDI +Y L+ + KN
Sbjct: 277 LPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDIVTYNCFLKVLCENKNSEEALR 336
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y M + G P V ++ ++I+ D A E + EM+ C + +I+GL
Sbjct: 337 LYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEMDKRGCAQDVDTYIVMIDGLF 396
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
++ +A +G + +++ + I +R+ + MR
Sbjct: 397 GCNKVEDACFLIEDIVNKGMKLPYQKFDSFLMQLSVIGNIRAIHRLSEHMR 447
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 152/289 (52%), Gaps = 5/289 (1%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
K+ HV A+++ ++++ R ++ YT LL GW + L V MK PDVV
Sbjct: 161 KTGHVAVAEQLVEELQPR-LPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVV 219
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+ ++ + R+++A EL REME C P+ + TL+ GLG+ R+ EA++ F +
Sbjct: 220 VFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEM 279
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+++G P++ TY +V A+C + RI+ Y +D M + G+ + Y K +
Sbjct: 280 RRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQL 339
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EE + +RM R+ P +S Y +V+R+ C + A+ +W+EM+ + P + ++
Sbjct: 340 EECLELMERM-RECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAI 398
Query: 262 LINSLCHEDKLDDACKYFQEMLDIG--IRPPGQLFSNLKQAL-RDEGME 307
++ L + L +AC YF++M+ G + P + +L +L RD+ +E
Sbjct: 399 MVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLE 447
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 144/352 (40%), Gaps = 38/352 (10%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L L + L+ C+ ++ A+ V +MK PD+ + LL G+
Sbjct: 179 LPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAF 238
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E+ REM+ G P+ VSY ++ + R DEA+ +F EM C P + TL+
Sbjct: 239 ELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAF 298
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+S+ +F + G +A Y A+ ++ + +M+ MR+C P+
Sbjct: 299 CKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDL 358
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
Y++V+ K G T++A +++ M P V T+ I+V + A +
Sbjct: 359 SIYNVVIRLACKLGETKQAVALWNEMETNE-LSPGVDTFAIMVTGLVGQGVLVEACGYFK 417
Query: 246 EMKARG--VLPVMHMYSTLINSLCHEDKLD------------------------------ 273
+M RG V P + L+NSL + KL+
Sbjct: 418 DMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNFGAWTIWIHALYA 477
Query: 274 -----DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+AC Y +MLD G+ P F+ L + L+ + A + +K+ K+
Sbjct: 478 KKHVKEACMYCLDMLDAGLMPQPDTFAKLMKGLKKLYNRQIAAEITEKVRKM 529
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 85/183 (46%), Gaps = 5/183 (2%)
Query: 146 FEPEAPT----YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+P P Y A++ +C ++++A ++ M+ + P+ ++ +L + GR
Sbjct: 175 LQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRF 234
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
E+A+ + + M R+ G P +Y +++ +VD AMR++ EM+ +G P Y T
Sbjct: 235 EDAFELAREMERR-GCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGT 293
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
L+ + C ++ ++ M G+R ++ A + E + L +++ + R
Sbjct: 294 LVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECR 353
Query: 322 KTP 324
P
Sbjct: 354 CPP 356
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 1/156 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + L+ CK+ + + E D M + D Y +++
Sbjct: 279 MRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQ 338
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+ M++ PD+ Y ++I C +AV L+ EME P F
Sbjct: 339 LEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAI 398
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
++ GL + L EA +F RG AP Y +
Sbjct: 399 MVTGLVGQGVLVEACGYFKDMVGRGLFV-APQYGVL 433
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 152/289 (52%), Gaps = 5/289 (1%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
K+ HV A+++ ++++ R ++ YT LL GW + L V MK PDVV
Sbjct: 173 KTGHVAVAEQLVEELQPR-LPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVV 231
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+ ++ + R+++A EL REME C P+ + TL+ GLG+ R+ EA++ F +
Sbjct: 232 VFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEM 291
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+++G P++ TY +V A+C + RI+ Y +D M + G+ + Y K +
Sbjct: 292 RRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQL 351
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EE + +RM R+ P +S Y +V+R+ C + A+ +W+EM+ + P + ++
Sbjct: 352 EECLELMERM-RECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAI 410
Query: 262 LINSLCHEDKLDDACKYFQEMLDIG--IRPPGQLFSNLKQAL-RDEGME 307
++ L + L +AC YF++M+ G + P + +L +L RD+ +E
Sbjct: 411 MVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLE 459
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 144/352 (40%), Gaps = 38/352 (10%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L L + L+ C+ ++ A+ V +MK PD+ + LL G+
Sbjct: 191 LPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRFEDAF 250
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E+ REM+ G P+ VSY ++ + R DEA+ +F EM C P + TL+
Sbjct: 251 ELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGTLVTAF 310
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+S+ +F + G +A Y A+ ++ + +M+ MR+C P+
Sbjct: 311 CKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDL 370
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
Y++V+ K G T++A +++ M P V T+ I+V + A +
Sbjct: 371 SIYNVVIRLACKLGETKQAVALWNEMETNE-LSPGVDTFAIMVTGLVGQGVLVEACGYFK 429
Query: 246 EMKARG--VLPVMHMYSTLINSLCHEDKLD------------------------------ 273
+M RG V P + L+NSL + KL+
Sbjct: 430 DMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCIMTKGCELNVGAWTIWIHALYA 489
Query: 274 -----DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+AC Y +MLD G+ P F+ L + L+ + A + +K+ K+
Sbjct: 490 KKHVKEACMYCLDMLDAGLMPQPDTFAKLMKGLKKLYNRQIAAEITEKVRKM 541
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 85/183 (46%), Gaps = 5/183 (2%)
Query: 146 FEPEAPT----YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+P P Y A++ +C ++++A ++ M+ + P+ ++ +L + GR
Sbjct: 187 LQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVVVFNTLLAGFVADGRF 246
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
E+A+ + + M R+ G P +Y +++ +VD AMR++ EM+ +G P Y T
Sbjct: 247 EDAFELAREMERR-GCPPNAVSYTTLMQGLGARGRVDEAMRVFVEMRRKGCAPDSVTYGT 305
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
L+ + C ++ ++ M G+R ++ A + E + L +++ + R
Sbjct: 306 LVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQLEECLELMERMRECR 365
Query: 322 KTP 324
P
Sbjct: 366 CPP 368
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 1/156 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + L+ CK+ + + E D M + D Y +++
Sbjct: 291 MRRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQ 350
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+ M++ PD+ Y ++I C +AV L+ EME P F
Sbjct: 351 LEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAI 410
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
++ GL + L EA +F RG AP Y +
Sbjct: 411 MVTGLVGQGVLVEACGYFKDMVGRGLFV-APQYGVL 445
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 154/303 (50%), Gaps = 1/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G +L N +D + K+ +E+ + +F ++K F PD +SYTIL+ G +
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E++ MK+ G D +Y +I+ C + + ++A +L EM+ +P+ + +
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGS 659
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL RL EA F ++K +G E Y++++ + RI++AY +M+E+ + G
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T++ +L L+KA EA F+ M T P TY I++ C + + A
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCT-PNYITYSILIHGLCKIRKFNKA 778
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
W EM+ +G P + Y+T+I+ L + +A F++ + G +++ + +
Sbjct: 779 FVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEG 838
Query: 301 LRD 303
L +
Sbjct: 839 LSN 841
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 167/357 (46%), Gaps = 37/357 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N ++ L + V+ A + F++MKK P++ +Y I+++ + L +
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETA 428
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V MKD G P+V++ IM++ C A+R D+A +F ++ C+P +C+LI G
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-- 182
LG R+ EA + + Q P A Y +++ + R D +++ +EM + G
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548
Query: 183 ---------------------------------PNTRTYDIVLHHLIKAGRTEEAYSVFK 209
P+ R+Y I++H L+KAG EAY +F
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M ++ G Y V+ FC + +V+ A ++ +EMK +G P + Y ++I+ L
Sbjct: 609 TM-KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKI 667
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
D+LD+A F+E GI ++S+L G + A ++ +++ + TP V
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 724
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 157/324 (48%), Gaps = 2/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + F LI + V+ A + D+MK +PD+ Y + ++ +G+
Sbjct: 226 MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGK 285
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK +G D V+Y MI C A R +EAVELF M+ P + + T
Sbjct: 286 VDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNT 345
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G G + +A + +++G P +YN ++ ++++A + +EM+K
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+I++ L KAG+ E A V M + G P V T I+V C ++D A
Sbjct: 406 I-PNLSTYNIMIDMLCKAGKLETALVVRDAM-KDAGLFPNVITVNIMVDRLCKAQRLDDA 463
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I++ + + P Y +LI L ++D+A K +++MLD P ++++L +
Sbjct: 464 CSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRN 523
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
G +E + ++ +L +P
Sbjct: 524 FFKCGRKEDGHKIYNEMLRLGCSP 547
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 156/324 (48%), Gaps = 2/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K + + LI L SR + +F +M++ + ++ +T L+ + ++
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK + EPDVV Y + I+ A + D A + F EM+A + +
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L RL+EA++ F + P A YN ++ Y + + DAY +++ R+ G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+ +L L + G+ +EA F+ M K P +STY I++ M C +++ A
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEM--KKDAIPNLSTYNIMIDMLCKAGKLETA 428
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + D MK G+ P + + +++ LC +LDDAC F+ + RP + +L +
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A L +++ + P
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIP 512
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + N ++D LCK++ ++ A +F+ + + PD +Y L+EG G+
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGR 494
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++Y +M D P+ V Y +I R ++ +++ EM C P + T
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + + + F + K GF P+A +Y ++ + ++AY + M++ G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+TR Y+ V+ K+G+ +AY + + M K G EPTV TY V+ ++D A
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK-GHEPTVVTYGSVIDGLAKIDRLDEA 673
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++E K++G+ + +YS+LI+ ++D+A +E++ G+ P ++ L A
Sbjct: 674 YMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 733
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L A+V Q + L+ TP
Sbjct: 734 LVKAEEISEALVCFQSMKDLKCTP 757
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 152/312 (48%), Gaps = 11/312 (3%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + LI L K+ A E+F MK++ D ++Y +++G+ + + +
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EMK G EP VV+YG +I+ R DEA LF E ++ + + I+ +LI+G G
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA + ++G P T+N ++ A + I++A M+ PN
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYI 760
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I++H L K + +A+ ++ M +K G +P V TY ++ + A ++++
Sbjct: 761 TYSILIHGLCKIRKFNKAFVFWQEM-QKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEK 819
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM----LDIGIRPPGQLFSNLKQALR 302
K +G + +Y+ +I L + ++ DA + F+E I + L +L +A
Sbjct: 820 FKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKA-- 877
Query: 303 DEGMEETAVVLA 314
E +E+ A+V A
Sbjct: 878 -ECIEQAAIVGA 888
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI K E +++++M + PD+ ++ + + +++E+K
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF PD SY I+I+ A EA ELF M+ C + T+I+G +++
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A Q + K +G EP TY +V+ R+++AY + +E + GI N Y ++
Sbjct: 637 KAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K GR +EAY + + + +K G P V T+ ++ ++ A+ + MK
Sbjct: 697 DGFGKVGRIDEAYLIMEELMQK-GLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC 755
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P YS LI+ LC K + A ++QEM G +P ++ + L G
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 37/312 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+ + ++R +++ ++M F P + ++ + + + L + M+
Sbjct: 133 YNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMR 192
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
F P +Y +I A +++ D + LF++M+ + H+F TLI E R+
Sbjct: 193 KLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVD 252
Query: 133 EALQFFGQSKKRGFEPEAPTYN-----------------------------------AVV 157
AL + K EP+ YN +++
Sbjct: 253 AALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMI 312
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
G C + R+N+A + + M + P Y+ ++ AG+ E+AYS+ +R RK G
Sbjct: 313 GVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRK-GC 371
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P+V +Y ++ QVD A++ ++EMK + +P + Y+ +I+ LC KL+ A
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDAIPNLSTYNIMIDMLCKAGKLETALV 430
Query: 278 YFQEMLDIGIRP 289
M D G+ P
Sbjct: 431 VRDAMKDAGLFP 442
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 107/203 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ LID K ++ A + +++ ++ P++ ++ LL+ + + +
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ MKD P+ ++Y I+I+ C +++++A ++EM+ KP+ + T+I+G
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + EA F + K++G ++ YNA++ + R +DAYR+ +E R G
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863
Query: 185 TRTYDIVLHHLIKAGRTEEAYSV 207
T+T ++L L KA E+A V
Sbjct: 864 TKTCVVLLDSLHKAECIEQAAIV 886
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/280 (18%), Positives = 121/280 (43%), Gaps = 4/280 (1%)
Query: 46 KSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE 105
++Y LL + + + ++ EM GF P + ++ + +++ EA +
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190
Query: 106 MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
M +P+ + LI L + + L F Q ++ G+ + ++ + R
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++ A ++DEM+ + P+ Y++ + KAG+ + A+ F M + G TY
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEM-KANGLVLDDVTYT 309
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
++ + C +++ A+ +++ M +P + Y+T+I K +DA +
Sbjct: 310 SMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRK 369
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 325
G P ++ + L +G + A+ +K ++++K +
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEAL---KKFEEMKKDAI 406
>gi|224112321|ref|XP_002316152.1| predicted protein [Populus trichocarpa]
gi|222865192|gb|EEF02323.1| predicted protein [Populus trichocarpa]
Length = 785
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 149/285 (52%), Gaps = 1/285 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D + +NR++ L K+ +E + F K++ D ++Y IL++ + +
Sbjct: 184 DSIKSATQFSAYNRVLKYLAKAEKLEVSFCCFKKVQDSGCKIDTETYNILMKLFLNKGLP 243
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
E+Y M+ DV +Y +MI + + R D A +LF+EM+ N +PS IF +L
Sbjct: 244 YKAFEIYETMEAAHCSLDVSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFSSL 303
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++ +G RL +++ + + + G P A Y +++ +Y + +++ A R+ DEM+ G
Sbjct: 304 VDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGKLDAALRLWDEMKIAGF 363
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN Y +++ K+G+ + A S+F+ M K G PT STY ++ M + QVD AM
Sbjct: 364 RPNFGLYTLIIESHAKSGKLDIAMSIFRDM-EKAGFLPTPSTYSSLLEMHAASGQVDAAM 422
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++++ M G+ P + Y+ L+ L H+ +D A K EM +G
Sbjct: 423 KLYNSMTNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKAMG 467
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 154/329 (46%), Gaps = 9/329 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N L+ +A E+++ M+ D+ +Y +++ + L +
Sbjct: 222 GCKIDTETYNILMKLFLNKGLPYKAFEIYETMEAAHCSLDVSTYELMIPSLAKSGRLDAA 281
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++EMK+ F P + + ++++ A R + +++++ EM+ +PS ++ +LI
Sbjct: 282 FKLFQEMKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIES 341
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L AL+ + + K GF P Y ++ ++ S +++ A + +M K G P
Sbjct: 342 YTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPT 401
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L +G+ + A ++ M+ G P +STY ++ + + VD+A +I
Sbjct: 402 PSTYSSLLEMHAASGQVDAAMKLYNSMT-NAGLRPGLSTYTALLTLLAHKKLVDVAAKIL 460
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EMKA G V S ++ + +D + ++ + M GIR + L ++
Sbjct: 461 LEMKAMG-FSVDVSASDVLMVYIKDGSVDLSLRWLRFMSSSGIRTNNFIIRQLFESCMKN 519
Query: 305 GMEETAVVL-------AQKIDKLRKTPLV 326
G+ E+A L A K+D + T ++
Sbjct: 520 GLYESAKPLLETYVNSAAKVDLILYTSIL 548
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + + L F+ L+D++ K+ +E + +V+ +M+ P Y L+E + +
Sbjct: 288 MKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSLIESYTKAGK 347
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + ++ EMK GF P+ Y ++I +H + + D A+ +FR+ME P+P + +
Sbjct: 348 LDAALRLWDEMKIAGFRPNFGLYTLIIESHAKSGKLDIAMSIFRDMEKAGFLPTPSTYSS 407
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ + ++ A++ + G P TY A++ ++ A +++ EM+ G
Sbjct: 408 LLEMHAASGQVDAAMKLYNSMTNAGLRPGLSTYTALLTLLAHKKLVDVAAKILLEMKAMG 467
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
+ D+++ + IK G + + + MS
Sbjct: 468 FSVDVSASDVLMVY-IKDGSVDLSLRWLRFMS 498
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 153/320 (47%), Gaps = 36/320 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMK--------------------------- 37
G K + + LI LCK+RH+ A E+F++M
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 38 --------KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINA 89
KRR +P++ ++T L++ + + L+ E+Y M PDV +YG +IN
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C DEA ++F ME C P+ I+ TLI+G KR+ + ++ F + ++G
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
TY ++ YC R + A + ++M P+ RTY+++L L G+ E+A +F+
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M RK + + TY I+++ C +V+ A ++ + ++G+ P + Y+T+I+ C
Sbjct: 423 YM-RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 270 DKLDDACKYFQEMLDIGIRP 289
+ +A F++M + G P
Sbjct: 482 GLIHEADSLFKKMKEDGFLP 501
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 144/291 (49%), Gaps = 5/291 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +L F L++ C +E A +FD++ F P++ +YT L+ + ++
Sbjct: 144 MMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRH 203
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E++ +M +G P+VV+Y ++ C R+ +A L R+M +P+ F
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ +L EA + + + P+ TY +++ C +++A +M M + G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN Y ++H K+ R E+ +F MS+K G TY ++++ +C + D+A
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLIQGYCLVGRPDVA 382
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM----LDIGI 287
++++M +R P + Y+ L++ LC K++ A F+ M +DI I
Sbjct: 383 QEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ L N ++ +C S RA KM K F+PD+ ++T LL G+
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ ++ GF+P+VV+Y +I C + + AVELF +M +P+ +
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL R +A KR EP T+ A++ A+ ++ +A + + M +
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +++ L G +EA +F M R G P Y ++ FC + +V+
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN-GCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+I+ EM +GV+ Y+ LI C + D A + F +M P + ++ L
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 301 LRDEGMEETAVVLAQKIDK 319
L G E A+++ + + K
Sbjct: 408 LCCNGKVEKALMIFEYMRK 426
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 123/269 (45%), Gaps = 1/269 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A ++F +M R P I +T LL + + ++ +M+ G P + + I+++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C + + A +M +P F +L+NG R+ +A+ F Q GF+P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TY ++ C + +N A + ++M G PN TY+ ++ L + GR +A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+ M ++ EP V T+ ++ F ++ A +++ M V P + Y +LIN LC
Sbjct: 247 RDMMKRR-IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
LD+A + F M G P +++ L
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL + ++AL F + P + ++ R + + ++M+ GI
Sbjct: 57 NGL-HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIP 115
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P T +IV+H + + + A +M K G EP + T+ ++ +C+ +++ A+
Sbjct: 116 PLLCTCNIVMHCVCLSSQPCRASCFLGKM-MKLGFEPDLVTFTSLLNGYCHWNRIEDAIA 174
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++D++ G P + Y+TLI LC L+ A + F +M G RP ++ L L
Sbjct: 175 LFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC 234
Query: 303 DEGMEETAVVLAQKIDKLRKTPLV 326
+ G A L + + K R P V
Sbjct: 235 EIGRWGDAAWLLRDMMKRRIEPNV 258
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 154/303 (50%), Gaps = 1/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G +L N +D + K+ +E+ + +F ++K F PD +SYTIL+ G +
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGF 599
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E++ MK+ G D +Y +I+ C + + ++A +L EM+ +P+ + +
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGS 659
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL RL EA F ++K +G E Y++++ + RI++AY +M+E+ + G
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T++ +L L+KA EA F+ M T P TY I++ C + + A
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCT-PNYITYSILIHGLCKIRKFNKA 778
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
W EM+ +G P + Y+T+I+ L + +A F++ + G +++ + +
Sbjct: 779 FVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEG 838
Query: 301 LRD 303
L +
Sbjct: 839 LSN 841
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 167/357 (46%), Gaps = 37/357 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N ++ L + V+ A + F++MKK P++ +Y I+++ + L +
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETA 428
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V MKD G P+V++ IM++ C A+R D+A +F ++ C+P +C+LI G
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG-- 182
LG R+ EA + + Q P A Y +++ + R D +++ +EM + G
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPD 548
Query: 183 ---------------------------------PNTRTYDIVLHHLIKAGRTEEAYSVFK 209
P+ R+Y I++H L+KAG EAY +F
Sbjct: 549 LLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFY 608
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M ++ G Y V+ FC + +V+ A ++ +EMK +G P + Y ++I+ L
Sbjct: 609 TM-KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKI 667
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
D+LD+A F+E GI ++S+L G + A ++ +++ + TP V
Sbjct: 668 DRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 724
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 157/324 (48%), Gaps = 2/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + F LI + V+ A + D+MK +PD+ Y + ++ +G+
Sbjct: 226 MQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGK 285
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK +G D V+Y MI C A R +EAVELF M+ P + + T
Sbjct: 286 VDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNT 345
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G G + +A + +++G P +YN ++ ++++A + +EM+K
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+I++ L KAG+ E A V M + G P V T I+V C ++D A
Sbjct: 406 I-PNLSTYNIMIDMLCKAGKLETALVVRDAM-KDAGLFPNVITVNIMVDRLCKAQRLDDA 463
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I++ + + P Y +LI L ++D+A K +++MLD P ++++L +
Sbjct: 464 CSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRN 523
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
G +E + ++ +L +P
Sbjct: 524 FFKCGRKEDGHKIYNEMLRLGCSP 547
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 156/324 (48%), Gaps = 2/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K + + LI L SR + +F +M++ + ++ +T L+ + ++
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK + EPDVV Y + I+ A + D A + F EM+A + +
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L RL+EA++ F + P A YN ++ Y + + DAY +++ R+ G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+ +L L + G+ +EA F+ M K P +STY I++ M C +++ A
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEM--KKDAIPNLSTYNIMIDMLCKAGKLETA 428
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + D MK G+ P + + +++ LC +LDDAC F+ + RP + +L +
Sbjct: 429 LVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEG 488
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G + A L +++ + P
Sbjct: 489 LGRHGRVDEAYKLYEQMLDANQIP 512
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + N ++D LCK++ ++ A +F+ + + PD +Y L+EG G+
Sbjct: 435 MKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGR 494
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++Y +M D P+ V Y +I R ++ +++ EM C P + T
Sbjct: 495 VDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNT 554
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + + + F + K GF P+A +Y ++ + ++AY + M++ G
Sbjct: 555 YMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG 614
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+TR Y+ V+ K+G+ +AY + + M K G EPTV TY V+ ++D A
Sbjct: 615 CVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK-GHEPTVVTYGSVIDGLAKIDRLDEA 673
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++E K++G+ + +YS+LI+ ++D+A +E++ G+ P ++ L A
Sbjct: 674 YMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 733
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L A+V Q + L+ TP
Sbjct: 734 LVKAEEISEALVCFQSMKDLKCTP 757
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 152/312 (48%), Gaps = 11/312 (3%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + LI L K+ A E+F MK++ D ++Y +++G+ + + +
Sbjct: 581 IPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQ 640
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EMK G EP VV+YG +I+ R DEA LF E ++ + + I+ +LI+G G
Sbjct: 641 LLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFG 700
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA + ++G P T+N ++ A + I++A M+ PN
Sbjct: 701 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYI 760
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I++H L K + +A+ ++ M +K G +P V TY ++ + A ++++
Sbjct: 761 TYSILIHGLCKIRKFNKAFVFWQEM-QKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEK 819
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM----LDIGIRPPGQLFSNLKQALR 302
K +G + +Y+ +I L + ++ DA + F+E I + L +L +A
Sbjct: 820 FKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKA-- 877
Query: 303 DEGMEETAVVLA 314
E +E+ A+V A
Sbjct: 878 -ECIEQAAIVGA 888
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI K E +++++M + PD+ ++ + + +++E+K
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF PD SY I+I+ A EA ELF M+ C + T+I+G +++
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A Q + K +G EP TY +V+ R+++AY + +E + GI N Y ++
Sbjct: 637 KAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K GR +EAY + + + +K G P V T+ ++ ++ A+ + MK
Sbjct: 697 DGFGKVGRIDEAYLIMEELMQK-GLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKC 755
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P YS LI+ LC K + A ++QEM G +P ++ + L G
Sbjct: 756 TPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 107/203 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ LID K ++ A + +++ ++ P++ ++ LL+ + + +
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ MKD P+ ++Y I+I+ C +++++A ++EM+ KP+ + T+I+G
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + EA F + K++G ++ YNA++ + R +DAYR+ +E R G
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863
Query: 185 TRTYDIVLHHLIKAGRTEEAYSV 207
T+T ++L L KA E+A V
Sbjct: 864 TKTCVVLLDSLHKAECIEQAAIV 886
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/322 (18%), Positives = 136/322 (42%), Gaps = 16/322 (4%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G+ + L D N ++ + A+ + D+ R ++Y LL + +
Sbjct: 101 IGVLRRLKDVNNAVN------YFRWAERLTDRAHCR------EAYNSLLMVMARTRKFNC 148
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ ++ EM GF P + ++ + +++ EA + M +P+ + LI
Sbjct: 149 LEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIG 208
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L + + L F Q ++ G+ + ++ + R++ A ++DEM+ + P
Sbjct: 209 ALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEP 268
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ Y++ + KAG+ + A+ F M + G TY ++ + C +++ A+ +
Sbjct: 269 DVVLYNVCIDCFGKAGKVDMAWKXFHEM-KANGLVLDDVTYTSMIGVLCKADRLNEAVEL 327
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++ M +P + Y+T+I K +DA + G P ++ + L
Sbjct: 328 FEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGR 387
Query: 304 EGMEETAVVLAQKIDKLRKTPL 325
+G + A+ +K ++++K +
Sbjct: 388 KGQVDEAL---KKFEEMKKDAI 406
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 162/329 (49%), Gaps = 7/329 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ + LI LC+ ++ A E F M + P++ +Y ++ G +
Sbjct: 137 MKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANR 195
Query: 61 LLSMNEVYREMK-----DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
+ E++ +M+ G EPDV+SY +I+A C A+R D+A E F+ M A C P+
Sbjct: 196 IDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNV 255
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ +LI+GL R SE L+ K++GF +NA++ A + A + +
Sbjct: 256 VTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFER 315
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
+ K G PN TY++ +H L KAGR +EAY + M T P V TY ++ FC
Sbjct: 316 LLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVT-PDVITYSSIIDGFCKAG 374
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
++D A ++ M +P + TL++ K +A + ++M++ G P Q ++
Sbjct: 375 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 434
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L + E+A+ + K+ + ++ P
Sbjct: 435 VLMDCVCGADSVESALEIYHKMKRKKRQP 463
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 147/276 (53%), Gaps = 7/276 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I+ CK+ V++A E+ D+MK+R D+ ++ L++G ++ + E ++ M
Sbjct: 114 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 173
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-----ATNCKPSPHIFCTLINGLGS 127
++ P+V++Y ++N C A R DEA+ELF +ME + C+P + T+I+ L
Sbjct: 174 EE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCK 232
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+R+ +A ++F + + G P TY++++ C R ++ ++ M++ G G N
Sbjct: 233 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIID 292
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++ +LH L K E+A F+R+ K G +P V TY + V C +VD A RI EM
Sbjct: 293 FNAMLHALWKNDEQEKACQFFERL-LKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEM 351
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
V P + YS++I+ C ++D A F M+
Sbjct: 352 VESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM 387
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 149/331 (45%), Gaps = 33/331 (9%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +ID CK+ +++A +VF +M P ++ LL G+ + K V+ +M
Sbjct: 363 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 422
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF P + +Y ++++ C A + A+E++ +M+ +P + + LI L +R+
Sbjct: 423 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVD 482
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP--------- 183
EA +F + P +A+V C +++A ++D + + G P
Sbjct: 483 EAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILV 542
Query: 184 -----------------------NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
+ TY + + + KAG+ +EA V ++M K G P
Sbjct: 543 EELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLK-GVRPD 601
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
TY V+R C +V+ A+ +++M +RG P + Y+ LI C D D+A + F+
Sbjct: 602 EGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFE 661
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
M+ G P Q L LRD G ++ V
Sbjct: 662 AMVAAGFTPQAQTMRTLSSCLRDAGYQDLLV 692
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 36/301 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + DFN ++ L K+ E+A + F+++ K P++ +Y + + G +
Sbjct: 281 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGR 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM + PDV++Y +I+ C A R D+A ++F M C P P F T
Sbjct: 341 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 400
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G K+ EA + GF P TYN ++ C + + A + +M++
Sbjct: 401 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 460
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY ++ L +A R VD A
Sbjct: 461 RQPDCNTYAPLIQCLCRARR------------------------------------VDEA 484
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
D M+A V+P + L+ LC + ++D+AC ++++G +P G+ F L +
Sbjct: 485 KEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEE 544
Query: 301 L 301
L
Sbjct: 545 L 545
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 7/257 (2%)
Query: 38 KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD 97
K F + + +LL + + K + + +E + P+ + Y +IN C A + D
Sbjct: 69 KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+A EL EM+ K + TLI GL + R+ EAL+ F +S P TYN VV
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF-KSMGEECSPNVITYNTVV 187
Query: 158 GAYCWSMRINDAYRMMDEMRK-----CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
C + RI++A + D+M K G P+ +Y V+ L KA R ++AY FKRM
Sbjct: 188 NGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM- 246
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
R G P V TY ++ C + + + MK +G + ++ ++++L D+
Sbjct: 247 RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 306
Query: 273 DDACKYFQEMLDIGIRP 289
+ AC++F+ +L G +P
Sbjct: 307 EKACQFFERLLKSGKKP 323
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 7/257 (2%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
GF+ + + +++NA AKR++EA L +E C P+ ++ T+ING ++ +A
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKCGIGPNTRTYDIVLH 193
+ + K+RG + + ++ ++ C RI++A M +C PN TY+ V++
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC--SPNVITYNTVVN 188
Query: 194 HLIKAGRTEEAYSVF----KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
L KA R +EA +F KR G EP V +Y V+ C +VD A + M+A
Sbjct: 189 GLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRA 248
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
G P + YS+LI+ LC D+ + + M + G F+ + AL +E
Sbjct: 249 VGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEK 308
Query: 310 AVVLAQKIDKLRKTPLV 326
A +++ K K P V
Sbjct: 309 ACQFFERLLKSGKKPNV 325
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ + +CK+ + A EV ++M + PD +Y +L + S
Sbjct: 562 GFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESA 621
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M G P +V+Y ++I CSA DEA +F M A P TL +
Sbjct: 622 IAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSC 681
Query: 125 L 125
L
Sbjct: 682 L 682
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%)
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A++ F+ KPG + T +++ F + + A R+ E P MY+T+I
Sbjct: 59 AWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVI 118
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
N C ++D A + EM + G++ L S L Q L +G
Sbjct: 119 NGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKG 160
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 156/319 (48%), Gaps = 20/319 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N +D L K+ + A E F +M++R + PD +Y+I+L G + L
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFCTLIN 123
E+ ++++ G + +V++Y ++I+ C A R D+A+E+F+ M A C P F +L+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL S +R+SEA F K G EP +Y+ ++ C + R+++A R+ +EM + P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ Y + L KA R EA ++M K G++ + V+ + C + A
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTK-GSKADAVAFSTVIGILCKKGHAEEAQ-- 269
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ +I LC LD+ACK F+EM+ P +LF+ L A+
Sbjct: 270 ----------------NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313
Query: 304 EGMEETAVVLAQKIDKLRK 322
V+L Q++ +++
Sbjct: 314 SKRLPDGVLLFQRMKSMKE 332
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 158/340 (46%), Gaps = 20/340 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLS 63
G+K + ++ +ID CK+ V+ A E+F M PD+ ++ LL+G + +
Sbjct: 103 GVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSE 162
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ M G EP+V+SY +++ C A R DEA L+ EM +C P + + +
Sbjct: 163 AFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVT 222
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA-----------------YCWSMRI 166
GL R++EA + +G + +A ++ V+G C S +
Sbjct: 223 GLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGML 282
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS--RKPGTEPTVSTY 224
++A + +EM P+ ++ ++H + K+ R + +F+RM ++ P + TY
Sbjct: 283 DEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETY 342
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
I+V C Q+D A + +EM G+ P + YS L++ LC KLD AC +EM
Sbjct: 343 NIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK 402
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G+ P +++ AL G + A+ + + TP
Sbjct: 403 EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 164/344 (47%), Gaps = 21/344 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + ++ L+D LCK+ ++ A ++++M ++ PD+ +YT + G +
Sbjct: 170 MAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANR 229
Query: 61 LLSMNEVYREMKDDGFEPDVVSY----GI-------------MINAHCSAKRYDEAVELF 103
+ + R+M G + D V++ GI MI C + DEA + F
Sbjct: 230 VAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK-RGF--EPEAPTYNAVVGAY 160
EM + N PS +F TLI+ + KRL + + F + K + F P TYN +V
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL 349
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C + ++++A +++EM G+ P+ TY ++ L K G+ + A + + MS K G P
Sbjct: 350 CKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS-KEGVFPD 408
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
T ++ +VD A+ + MKARG P + Y+TL++ LC ++D+A +
Sbjct: 409 SFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLA 468
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+M+ P ++ + AL G A + Q++ K P
Sbjct: 469 KMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLP 512
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 48/349 (13%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL---LSMNEVYRE 70
N++I+ LC+S ++ A + F++M R P + + L+ + K L + + + +
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
MK+ P++ +Y IM++ C AK+ DEA EL EM P + L++GL +
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L A + K G P++ T +++ A + +++ A ++ M+ G P+ TY+
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L L KAGR +EA + +M T P V +Y I++ C + Q A I+ EM R
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCT-PDVFSYTIIITALCRSGQAAGAHAIFQEMVKR 508
Query: 251 GVLPVMHMYSTL--------------------------------INSLCHEDKLDDACKY 278
GVLP +Y +L ++ LC K +DAC+
Sbjct: 509 GVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEV 568
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
+ M D G + N+ + LR G K+DK R+ LVD
Sbjct: 569 VERMADAGFPADAFTYINVVRGLRKLG----------KVDKARQ--LVD 605
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G++ V +Y ++A A A E F++M+ P + ++ GL L +A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-CGIGPNTRTYDIVLH 193
+ GQ ++ G + TY+ V+ C + R++DA + M G P+ T++ +L
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L R EA+ +F+ M+ K G EP V +Y ++ C ++D A R+W+EM + +
Sbjct: 153 GLCSGERMSEAFVLFEYMA-KAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y++ + LC +++ +AC ++M+ G + FS + L +G E A
Sbjct: 212 PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ-- 269
Query: 314 AQKIDKLRKTPLVD 327
Q I+ L ++ ++D
Sbjct: 270 NQMIEHLCRSGMLD 283
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 3/175 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G +L +N L+D LCK+ ++ A KM + PD+ SYTI++ +
Sbjct: 435 MKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQ 494
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM G PD V Y +++ D A+EL + + CKP +
Sbjct: 495 AAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFVMHKM 551
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+++GL + +A + + GF +A TY VV +++ A +++D+
Sbjct: 552 VVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDD 606
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
VL HL G+ +F + R+ G + +V TY + +A + +M+ R
Sbjct: 11 VLRHL---GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR 67
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
G P YS ++ LC +LD A + ++ + G++
Sbjct: 68 GYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVK 105
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 137/263 (52%), Gaps = 1/263 (0%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
+V+ A+ V M K+ +P+ +Y+ L++G+ + + ++ M G +V SY
Sbjct: 150 NVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYN 209
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
IMIN C K DEA+ LF EM P + +LINGL ++S AL+ + R
Sbjct: 210 IMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDR 269
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+ TY++++ A C + +++ A ++ ++ GI PN TY I++ L K GR E+A
Sbjct: 270 GQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDA 329
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+++F+ + K G TV+TY +++ FC D A+ + +MK P Y +I
Sbjct: 330 HNIFEDLLVK-GYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIR 388
Query: 265 SLCHEDKLDDACKYFQEMLDIGI 287
SL D+ D A +EM+ G+
Sbjct: 389 SLFDNDENDKAENLLREMITRGL 411
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ ++ L+D C V A+ +F M R ++ SY I++ G+ + K
Sbjct: 161 MMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKM 220
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM PDVV+Y +IN C + + A++L EM P + +
Sbjct: 221 TDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSS 280
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L ++ +A+ K +G P TY ++ C R+ DA+ + +++ G
Sbjct: 281 LLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 340
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TY +++H G +EA ++ +M + P TYEI++R N + D A
Sbjct: 341 YNITVNTYTVMIHGFCNKGLFDEALALLSKM-KDNSCFPNALTYEIIIRSLFDNDENDKA 399
Query: 241 MRIWDEMKARGVL 253
+ EM RG+L
Sbjct: 400 ENLLREMITRGLL 412
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 120/254 (47%), Gaps = 7/254 (2%)
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+ KN+L+M M G P+ V+Y +++ +C + A +F M +
Sbjct: 153 EAKNVLAM------MMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVW 206
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ +ING K EA+ F + R P+ TYN+++ C S +I+ A +++DEM
Sbjct: 207 SYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEM 266
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G P+ TY +L L K + ++A ++ K + + G P + TY I++ C +
Sbjct: 267 HDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNL-KDQGIRPNMYTYTILIDGLCKGGR 325
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
++ A I++++ +G ++ Y+ +I+ C++ D+A +M D P +
Sbjct: 326 LEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEI 385
Query: 297 LKQALRDEGMEETA 310
+ ++L D + A
Sbjct: 386 IIRSLFDNDENDKA 399
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 3/196 (1%)
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
H+ L +E + EA K+G P A TY++++ YC +N+A +
Sbjct: 136 HVALPLWYNANNEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFST 195
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS-RKPGTEPTVSTYEIVVRMFCYN 234
M G+ N +Y+I+++ K T+EA ++F+ M RK P V TY ++ C +
Sbjct: 196 MSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRK--LIPDVVTYNSLINGLCKS 253
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
++ A+++ DEM RG P + YS+L+++LC ++D A + + D GIRP +
Sbjct: 254 GKISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTY 313
Query: 295 SNLKQALRDEGMEETA 310
+ L L G E A
Sbjct: 314 TILIDGLCKGGRLEDA 329
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 104/220 (47%), Gaps = 1/220 (0%)
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
EA + M P+ + +L++G ++ A F RG +YN ++
Sbjct: 153 EAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMI 212
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+C ++A + +EM + P+ TY+ +++ L K+G+ A + M + G
Sbjct: 213 NGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDR-GQ 271
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P + TY ++ C N QVD A+ + +K +G+ P M+ Y+ LI+ LC +L+DA
Sbjct: 272 PPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 331
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
F+++L G ++ + ++G+ + A+ L K+
Sbjct: 332 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 371
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+ +A ++ M K GI PN TY ++ A +F MS + G V +Y
Sbjct: 150 NVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLR-GVTANVWSY 208
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
I++ FC D AM +++EM R ++P + Y++LIN LC K+ A K EM D
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
G P +S+L AL + A+ L + +
Sbjct: 269 RGQPPDIITYSSLLDALCKNHQVDKAIALLKNL 301
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 9/132 (6%)
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
G +EA +V M K G P TY ++ +C +V+ A I+ M RGV +
Sbjct: 149 GNVKEAKNVLAMM-MKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWS 207
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
Y+ +IN C D+A F+EM + P +++L L G A+ L +D
Sbjct: 208 YNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKL---VD 264
Query: 319 KLRKTPLVDRGQ 330
++ DRGQ
Sbjct: 265 EMH-----DRGQ 271
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 138/259 (53%), Gaps = 1/259 (0%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
PD+ SY+ ++ G+ ++ +L Y EM D P+VV+Y +I A C A+ D+A+E+
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
M + P + ++++G S + EA+ F + + G EP+ TYN+++ C
Sbjct: 70 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
+ R +A ++ D M K G+ P+ TY +L G E + + M R G P
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHY 188
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ I+V + +V+ AM ++ +M+ +G+ P Y T+I+ LC +++DA YF++M
Sbjct: 189 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 248
Query: 283 LDIGIRPPGQLFSNLKQAL 301
+D G+RP ++++L +L
Sbjct: 249 IDEGLRPDSIVYNSLIHSL 267
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 141/280 (50%), Gaps = 7/280 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
+N +I LCK++ V++A EV M K PD +Y ++ G+ GQ K + +
Sbjct: 50 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF---LK 106
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M+ DG EPDVV+Y +++ C R EA ++F M KP + TL+ G ++
Sbjct: 107 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKG 166
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
L E + G P ++ +V AY ++ +A + +MR+ G+ PN TY
Sbjct: 167 ALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 226
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
V+ L K+GR E+A F++M + G P Y ++ C + + A ++ EM
Sbjct: 227 TVIDVLCKSGRVEDAMLYFEQMIDE-GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLD 285
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
RG+ ++++I+S C E ++ ++ K F M+ IG++P
Sbjct: 286 RGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKP 325
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 152/297 (51%), Gaps = 1/297 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ ++ +I+ K +++ +++M +R P++ +Y ++ + + + EV
Sbjct: 11 DVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVL 70
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
M G PD ++Y +++ CS+ + EA+ ++M + +P + +L++ L
Sbjct: 71 TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKN 130
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
R +EA + F KRG +P+ TY ++ Y + + + ++D M + GI PN +
Sbjct: 131 GRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 190
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
I++ K + EEA VF +M R+ G P TY V+ + C + +V+ AM +++M
Sbjct: 191 SILVCAYAKQEKVEEAMLVFSKM-RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 249
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
G+ P +Y++LI+SLC DK + A + F EMLD GI F+++ + EG
Sbjct: 250 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEG 306
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N L+D LCK+ A+++FD M KR PDI +Y LL+G+ + L+ M
Sbjct: 112 GVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEM 171
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G P+ + I++ A+ ++ +EA+ +F +M P+ + T+I+
Sbjct: 172 HGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDV 231
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ +A+ +F Q G P++ YN+++ + C + A + EM GI +
Sbjct: 232 LCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS 291
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
T ++ ++ K GR E+ +F M R G +P + T
Sbjct: 292 TIFFNSIIDSHCKEGRVIESVKLFDLMVR-IGVKPDIIT 329
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ +C P + T+ING E L + + + + P TYN+++ A C + +
Sbjct: 4 DGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTV 63
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+ A ++ M K G+ P+ TY+ ++H +G+ +EA K+M R G EP V TY
Sbjct: 64 DKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM-RSDGVEPDVVTYNS 122
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ C N + A +I+D M RG+ P + Y TL+ + L + M+ G
Sbjct: 123 LMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNG 182
Query: 287 IRPPGQLFSNLKQA----------------LRDEGMEETAVVLAQKIDKLRKTPLVD 327
I P +FS L A +R +G+ AV ID L K+ V+
Sbjct: 183 IHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVE 239
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 144/288 (50%), Gaps = 7/288 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ + LI LC+ ++ A E F M + P++ +Y ++ G +
Sbjct: 25 MKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNGLCKANR 83
Query: 61 LLSMNEVYREMK-----DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
+ E++ +M+ G EPDV+SY +I+A C A+R D+A E F+ M A C P+
Sbjct: 84 IDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNV 143
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ +LI+GL R+ EA Q K P A YNAVV + + ++ ++
Sbjct: 144 VTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLH 203
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M++ G G N ++ +LH L K E+A F+R+ K G +P V TY + V C
Sbjct: 204 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL-LKSGKKPNVVTYNVAVHGLCKAG 262
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+VD A RI EM V P + YS++I+ C ++D A F M+
Sbjct: 263 KVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM 310
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 157/364 (43%), Gaps = 53/364 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + DFN ++ L K+ E+A + F+++ K P++ +Y + + G +
Sbjct: 204 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGK 263
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM + PDV++Y +I+ C A R D+A ++F M C P P F T
Sbjct: 264 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 323
Query: 121 LINGLGSEKRLSEA-----------------------------------LQFFGQSKKRG 145
L++G K+ EA L+ + + K++
Sbjct: 324 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 383
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P+A TY ++ C + R+++A +D M + PN ++ L K G +EA
Sbjct: 384 RQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEAC 443
Query: 206 SVFKRM-----SRKP-------------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
SV + + +P G P +TY V+R C +VD A+ +++M
Sbjct: 444 SVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKM 503
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+RG P + Y+ LI C D DDA + F+ M+ G P Q L LRD G +
Sbjct: 504 ASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQ 563
Query: 308 ETAV 311
+ V
Sbjct: 564 DLLV 567
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 156/317 (49%), Gaps = 6/317 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRR-----FDPDIKSYTILLEGWGQQKNLLSMNEV 67
+N +++ LCK+ ++ E+FD M+KR +PD+ SY+ +++ + + + E
Sbjct: 71 YNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEY 130
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
++ M+ G P+VV+Y +I+ C R DEA L +++ + P + ++NG
Sbjct: 131 FKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKR 190
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+ + SE L+ K++GF +NA++ A + A + + + K G PN T
Sbjct: 191 QGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVT 250
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y++ +H L KAG+ +EAY + M T P V TY ++ FC ++D A ++ M
Sbjct: 251 YNVAVHGLCKAGKVDEAYRILLEMVESKVT-PDVITYSSIIDGFCKAGRMDKADDVFTRM 309
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+P + TL++ K +A + ++M++ G P Q ++ L +
Sbjct: 310 MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 369
Query: 308 ETAVVLAQKIDKLRKTP 324
E+A+ + K+ + ++ P
Sbjct: 370 ESALEIYHKMKRKKRQP 386
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 123/247 (49%), Gaps = 7/247 (2%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
YT ++ G+ + + E+ EMK+ G + DV+ + +I C R DEA+E F+ M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM- 60
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR-----GFEPEAPTYNAVVGAYCW 162
C P+ + T++NGL R+ E L+ F +KR G EP+ +Y+ V+ A C
Sbjct: 61 GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
+ R++ AY MR G PN TY ++ L K R +EAYS+ ++ + P
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQL-KGEDMVPRAM 179
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
Y VV F + + + MK +G + ++ ++++L D+ + AC++F+ +
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239
Query: 283 LDIGIRP 289
L G +P
Sbjct: 240 LKSGKKP 246
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 145/297 (48%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ ++ +ID LCK++ V++A E F +M+ P++ +Y+ L++G + +
Sbjct: 103 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEA 162
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++K + P + Y ++N + E +EL M+ + F +++
Sbjct: 163 YSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHA 222
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +A QFF + K G +P TYN V C + ++++AYR++ EM + + P+
Sbjct: 223 LWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPD 282
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ KAGR ++A VF RM P T+ ++ F + + A R+
Sbjct: 283 VITYSSIIDGFCKAGRMDKADDVFTRMMVHECI-PHPVTFMTLLHGFSEHKKSREAFRVH 341
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++M G +P + Y+ L++ +C D ++ A + + +M +P ++ L Q L
Sbjct: 342 EDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCL 398
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 7/249 (2%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y +IN C A + D+A EL EM+ K + TLI GL + R+ EAL+ F +S
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF-KSM 60
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-----CGIGPNTRTYDIVLHHLIK 197
P TYN VV C + RI++ + D+M K G P+ +Y V+ L K
Sbjct: 61 GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
A R ++AY FKRM R G P V TY ++ C +VD A + ++K ++P
Sbjct: 121 AQRVDKAYEYFKRM-RAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
Y+ ++N + K + + M + G F+ + AL +E A +++
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239
Query: 318 DKLRKTPLV 326
K K P V
Sbjct: 240 LKSGKKPNV 248
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
++ T+ING ++ +A + + K+RG + + ++ ++ C RI++A M
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60
Query: 177 -RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF----KRMSRKPGTEPTVSTYEIVVRMF 231
+C PN TY+ V++ L KA R +E +F KR G EP V +Y V+
Sbjct: 61 GEEC--SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C +VD A + M+A G P + YS+LI+ LC D++D+A ++ + P
Sbjct: 119 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRA 178
Query: 292 QLFSNLKQALRDEG 305
++ + + +G
Sbjct: 179 MYYNAVVNGFKRQG 192
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 144/282 (51%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ FN +ID LC++R A + ++M PD ++T L+EG+ ++ +
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGS 246
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + M + G P V+ ++IN +C R +A+ ++ A +P F T
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+NGL + AL+ G + G EP+ TY+ V+ C + + +A ++++M G
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T T++ ++ L + EEA + + ++ K G P V T+ I++ C +A
Sbjct: 367 CLPDTTTFNTLIVALCTENQLEEALDLARELTVK-GLSPNVYTFNILINALCKVGDPHLA 425
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+R+++EMK+ G P Y+ LI++LC KL A +EM
Sbjct: 426 VRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEM 467
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ ++ +I+ LC + +E A+ + ++M PD ++ L+ + L
Sbjct: 331 GCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEA 390
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ RE+ G P+V ++ I+INA C AV LF EM+++ C P + LI+
Sbjct: 391 LDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDN 450
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L S +L++AL + + G TYN ++ C RI +A + D+M GIG N
Sbjct: 451 LCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRN 510
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ L A R ++A + +M + G +P TY ++ +C + A I
Sbjct: 511 AITFNTLIDGLCNAERIDDAAELVDQMISE-GLQPNNVTYNSILTHYCKQGNISKAADIL 569
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M A G + Y+TLIN LC + A K + M G++P + ++ + Q+L
Sbjct: 570 QTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSL 626
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 142/305 (46%), Gaps = 2/305 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + FN LI+ LCK A +F++MK PD +Y IL++ L
Sbjct: 401 GLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKA 460
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +EM+ G V+Y +I+ C +R +EA E+F +M+ T + F TLI+G
Sbjct: 461 LDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDG 520
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +R+ +A + Q G +P TYN+++ YC I+ A ++ M G +
Sbjct: 521 LCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVD 580
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ L KA RT+ A + + M R G +PT Y V++ A+ ++
Sbjct: 581 VVTYATLINGLCKARRTQAALKLLRGM-RMKGMKPTPKAYNPVIQSLFRGNNGRDALSLF 639
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK-LDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM G P Y + LC + +A + EM D G P F L + L +
Sbjct: 640 REMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLN 699
Query: 304 EGMEE 308
GM++
Sbjct: 700 LGMDD 704
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 1/281 (0%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
+ + Y LL + + + Y EM G EPDVV++ +I+A C A++ AV +
Sbjct: 160 NTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLML 219
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
EM + + P F TL+ G E + AL+ + + G P + T N ++ YC
Sbjct: 220 EEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKL 279
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
R+ DA + + G P+ T+ ++ L + G + A V M ++ G EP V T
Sbjct: 280 GRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQE-GCEPDVYT 338
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y V+ C N +++ A I ++M G LP ++TLI +LC E++L++A +E+
Sbjct: 339 YSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELT 398
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G+ P F+ L AL G AV L +++ TP
Sbjct: 399 VKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTP 439
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 145/322 (45%), Gaps = 7/322 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+D FG++ +N L+ L + ++ + + +M + +PD+ ++ +++ + +
Sbjct: 152 LDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQ 211
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM PD ++ ++ + A+ L M C P+
Sbjct: 212 ARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNV 271
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING R+ +AL + Q GFEP+ T++ V C + ++ A +++ M + G
Sbjct: 272 LINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG 331
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY V++ L G EEA + +M G P +T+ ++ C Q++ A
Sbjct: 332 CEPDVYTYSTVINCLCNNGELEEAKGIVNQMV-DSGCLPDTTTFNTLIVALCTENQLEEA 390
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + E+ +G+ P ++ ++ LIN+LC A + F+EM G P ++ L
Sbjct: 391 LDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDN 450
Query: 301 LRDEGMEETAVVLAQKIDKLRK 322
L G LA+ +D L++
Sbjct: 451 LCSSGK------LAKALDLLKE 466
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 2/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G Q +N +ID LCK R +E A+EVFD+M + ++ L++G +
Sbjct: 467 MEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAER 526
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M +G +P+ V+Y ++ +C +A ++ + M A + + T
Sbjct: 527 IDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYAT 586
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL +R AL+ + +G +P YN V+ + DA + EM + G
Sbjct: 587 LINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVG 646
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIV 227
P+ TY IV L + G +EA+ M+ G P S++ ++
Sbjct: 647 GPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADN-GFIPEFSSFRML 693
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 138/340 (40%), Gaps = 37/340 (10%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKR--RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
RL+ L + E A + + R P Y ++ G M + EM+
Sbjct: 58 RLVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMR 117
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFCTLINGLGSEKRL 131
+G E + I ++ + +D+A +L +++ + + ++ L+ L ++
Sbjct: 118 REGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKI 177
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ + +G EP+ T+N V+ A C + + A M++EM C + P+ T+ +
Sbjct: 178 KLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTL 237
Query: 192 LHHLIKAGRTEEAYSVFKRMSR----------------------------------KPGT 217
+ ++ G E A + RMS G
Sbjct: 238 MEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGF 297
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
EP T+ V C N VD A+++ M G P ++ YST+IN LC+ +L++A
Sbjct: 298 EPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKG 357
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+M+D G P F+ L AL E E A+ LA+++
Sbjct: 358 IVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL 397
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/213 (17%), Positives = 85/213 (39%), Gaps = 37/213 (17%)
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
PS ++ +I LG+ G+ ++ G E + +G+Y +DA+ +
Sbjct: 88 PSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL 147
Query: 173 M-DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ +++ G+ NT Y+ +L L +
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEG--------------------------------- 174
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
+++ + + EM ++G+ P + ++T+I++LC + A +EM + P
Sbjct: 175 ---SKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDE 231
Query: 292 QLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+ L + +EG E A+ L ++ ++ +P
Sbjct: 232 TTFTTLMEGFVEEGSIEAALRLKARMSEMGCSP 264
>gi|357113487|ref|XP_003558534.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Brachypodium distachyon]
Length = 520
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 152/308 (49%), Gaps = 5/308 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ TLC+ + + A+ VF K F + +++ ILL GW ++ + EM+
Sbjct: 185 FNALLRTLCQEKSMSDARNVF-HAHKYEFQVNRQTFNILLSGWKTSED---AEAFFAEMR 240
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G +PD+V+Y +I+ C + ++A +L EM P + +LI GLG +
Sbjct: 241 ELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLDEMREKEISPDVITYTSLIGGLGLIGQPD 300
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + G P+ P YNA + + + R+ DA+ +MDEM G+ PN TY++
Sbjct: 301 KARHLLKEMCELGCHPDVPAYNATIRNFVIAKRLGDAFALMDEMASKGLMPNATTYNLFF 360
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
A A+ +++RM R P + +VR+ + +V A+ +W +M G
Sbjct: 361 RFYYWAYDIGSAWLLYERM-RSERCFPNTQSCMFIVRLCHRHGKVMQALELWSDMVGNGF 419
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ L + LC E KL++A + F +M+++G +P F +K ++ EE+
Sbjct: 420 GSFTLVSDVLFDLLCDEGKLEEAERCFHQMVELGQKPSSVAFRRIKILMQLANREESISK 479
Query: 313 LAQKIDKL 320
L +K+ +
Sbjct: 480 LNEKMARF 487
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/248 (18%), Positives = 93/248 (37%), Gaps = 35/248 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI--------------- 45
M + G+ +L +N LID CK+R VE+A ++ D+M+++ PD+
Sbjct: 239 MRELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLDEMREKEISPDVITYTSLIGGLGLIGQ 298
Query: 46 --------------------KSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+Y + + K L + EM G P+ +Y +
Sbjct: 299 PDKARHLLKEMCELGCHPDVPAYNATIRNFVIAKRLGDAFALMDEMASKGLMPNATTYNL 358
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+ A A L+ M + C P+ ++ ++ +AL+ + G
Sbjct: 359 FFRFYYWAYDIGSAWLLYERMRSERCFPNTQSCMFIVRLCHRHGKVMQALELWSDMVGNG 418
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F + + C ++ +A R +M + G P++ + + + A R E
Sbjct: 419 FGSFTLVSDVLFDLLCDEGKLEEAERCFHQMVELGQKPSSVAFRRIKILMQLANREESIS 478
Query: 206 SVFKRMSR 213
+ ++M+R
Sbjct: 479 KLNEKMAR 486
>gi|449451922|ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
gi|449520004|ref|XP_004167024.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
Length = 504
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 146/284 (51%), Gaps = 6/284 (2%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
KFG + +FN L+ C R ++ A+ VF KM R F P+IK+ +LL G+ + ++
Sbjct: 181 KFGTE----EFNVLLRAFCTQRQMKEARSVFHKMYSR-FPPNIKTINLLLLGFKESSDIT 235
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
S+ Y EM GF+P+ V+Y I I+A+C + + + +F+EME C+P+ TLI
Sbjct: 236 SVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLI 295
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G G K ++A Q F + R P+ YNA++ + S + A +M++M I
Sbjct: 296 HGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIE 355
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
++ TY ++ LI+ Y ++ +M + P T ++++ FC N +VD+ +
Sbjct: 356 HDSVTYHMMFSGLIRLEDVGGFYELYIKMVGR-NFVPKTRTAVMIMKFFCENRRVDLGLG 414
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
W + +G P H+ L+ LC + A + ++ML+ G
Sbjct: 415 FWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERG 458
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 93/211 (44%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K ++ ID CK VF +M++ + +P +++ T L+ G G K+
Sbjct: 244 MIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKD 303
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ E+ PD+ +Y +I++ + A + +MEA + + +
Sbjct: 304 KTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHM 363
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ +GL + + + + + R F P+ T ++ +C + R++ + + G
Sbjct: 364 MFSGLIRLEDVGGFYELYIKMVGRNFVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKG 423
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
P++ D+++ L G +A+ K+M
Sbjct: 424 YCPHSHVLDLLVTGLCARGMVLQAFECSKQM 454
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 1/301 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LC + A+ +F M+ P++ +Y +++G+ + ++ E+Y+EM
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG P+VV++GI+I+ C A + +M + P+ ++ LI+G LS
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL + +K P+ TY+ ++ C R+ +A ++ EM+K G PN TY+ ++
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G E+A V +M+ K G EP + T+ ++ +C +++ AM ++ EM +G+
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
LP + Y+ LI+ + +A + +EM + G+ P S L L +G A+
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 313 L 313
L
Sbjct: 530 L 530
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 155/334 (46%), Gaps = 17/334 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LID C+ +A +FD+M +++ P + YTIL+ G + +
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++R M++ G P++ +Y M++ +C +A+EL++EM P+ F LI+G
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDG 307
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + A +F G P YN ++ YC + +++A + E+ K I P+
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I++ L R EEA + + M +K G P TY ++ +C ++ A+ +
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKK-GFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--------- 295
+M +G+ P + +STLI+ C K++ A + EM+ G+ P ++
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486
Query: 296 -NLKQALR------DEGMEETAVVLAQKIDKLRK 322
N K+A R + G+ L+ ID L K
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 135/279 (48%), Gaps = 1/279 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ L +N ++D CK HV++A E++ +M P++ ++ IL++G +
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDE 313
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++S + +M G P++ Y +I+ +C A EA+ L E+E P +
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL R+ EA + KK+GF P A TYN ++ YC + A + +M + G
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T+ ++ KAG+ E A ++ M K G P V Y ++ + A
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-GLLPDVVAYTALIDGHFKDGNTKEA 492
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
R+ EM+ G+ P + S LI+ LC + ++ DA K F
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 143/298 (47%), Gaps = 14/298 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + F LID LCK+ + A++ M P+I Y L++G+ + NL
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ E++ PDV +Y I+I C R +EA L +EM+ P+ + TLI+G
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + +A++ Q ++G EP T++ ++ YC + ++ A + EM G+ P+
Sbjct: 413 YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ K G T+EA+ + K M ++ G P V T ++ C + ++ A++++
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEM-QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Query: 245 -------------DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+E+ P MY+ LI LC + ++ A K+F +M G+RP
Sbjct: 532 LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 8/321 (2%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N ++D L K + +V+ M R P++ +Y L++G +Q + L ++ EM +
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
P VV Y I+I C R EA +FR M + P+ + + T+++G + +
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL+ + + G P T+ ++ C + + A + + +M G+ PN Y+ ++
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
KAG EA S+ + + P V TY I+++ C +++ A + EMK +G L
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHE-ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P Y+TLI+ C E ++ A + +M + GI P FS L G E A+ L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 314 AQKI-------DKLRKTPLVD 327
++ D + T L+D
Sbjct: 461 YTEMVIKGLLPDVVAYTALID 481
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 141/308 (45%), Gaps = 5/308 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F LI + VE A V+ KM P +++ ++L+G ++ +M +VY +M
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+VV+YG +I+ C + +A LF EM P+ I+ LI GL E R+S
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + G P TYN ++ YC + A + EM G+ PN T+ I++
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K A M+ G P + Y ++ +C + A+ + E++ +
Sbjct: 306 DGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAV 311
LP + YS LI LC D++++A QEM G P ++ L EG ME+
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 312 VLAQKIDK 319
V +Q +K
Sbjct: 425 VCSQMTEK 432
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 143/337 (42%), Gaps = 53/337 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FG+ + +N LID CK+ ++ A + +++K PD+ +Y+IL++G
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +EMK GF P+ V+Y +I+ +C ++A+E+ +M +P+ F T
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ A+ + + +G P+ Y A++ + +A+R+ EM++ G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS---------------TYE 225
+ PN T ++ L K GR +A +F K GT+ T S Y
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDAIKLFLA---KTGTDTTGSKTNELDRSLCSPNHVMYT 560
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARG---------------------------------- 251
+++ C + ++ A + + +M+ G
Sbjct: 561 ALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKM 620
Query: 252 -VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
++P +Y L L A + +++ IGI
Sbjct: 621 GIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGI 657
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 149/301 (49%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ ++ +N L+ LCK+ A++VFD M K+ PD Y LL G+ +
Sbjct: 267 MCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGY 326
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ M+++ M +G +PD + I+I A+ DEA+ F +M P+ + T
Sbjct: 327 LVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGT 386
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ L ++ +A+ F + G P + ++ C + + A + EM G
Sbjct: 387 VMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRG 446
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PNT ++ +L+HL K G A ++F M R + V TY ++ +C + +VD A
Sbjct: 447 ICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD-VQCDVITYTTLIDGYCLDGKVDEA 505
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + M GV P Y+T+IN C +++DAC F++M G+ P ++S +
Sbjct: 506 TKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHG 565
Query: 301 L 301
L
Sbjct: 566 L 566
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 158/338 (46%), Gaps = 12/338 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM----KKRRFDPDIKSYTILLEGWG 56
M G +N L+ LC ++A + M + PD+ SYT ++ G
Sbjct: 158 MPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLL 217
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
++ L ++ EM D G P+ ++Y +++ +CS+ + EA+ +FR+M +P
Sbjct: 218 REGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVV 277
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ TL+ L R EA + F K+G +P++ Y ++ Y + ++++D M
Sbjct: 278 TYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVM 337
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G P+ ++I++ K G +EA F +M R+ G P + TY V+ C +
Sbjct: 338 VRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKM-RQQGLHPNIVTYGTVMDALCRVGK 396
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
VD AM +D + + G+ P ++ TLI+ LC DK D A + EM+ GI P F+
Sbjct: 397 VDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNT 456
Query: 297 LKQALRDEGMEETA-------VVLAQKIDKLRKTPLVD 327
L L EGM A V + + D + T L+D
Sbjct: 457 LLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLID 494
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 133/270 (49%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L++ LCK V RA+ +FD M + D+ +YT L++G+ + ++ M
Sbjct: 454 FNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMV 513
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG +P+ V+Y +IN +C R ++A LFR+M + P I+ T+++GL +R++
Sbjct: 514 LDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIA 573
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + K G + TYN ++ C + +DA RM + RT++I++
Sbjct: 574 AAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMI 633
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F + + G P V TY ++++ ++ ++ ++ G
Sbjct: 634 DALLKGGRHDEAKDLFASLLAR-GLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGC 692
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
M + L+ L + ++ A Y ++
Sbjct: 693 TADSRMLNALVGKLPQKGEVRKAGVYLSKI 722
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 141/295 (47%), Gaps = 12/295 (4%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL-LSMNEVYREMKDDGFEPDVVSYGIMI 87
A +F++M + D+ +Y+I++ + +L L+ + R ++ G+ +++ ++
Sbjct: 84 ALSLFNRMPR----ADLCTYSIVIGCCSRAGHLDLAFAALGRVIRT-GWTAQAITFSPLL 138
Query: 88 NAHCSAKRYDEAVEL-FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF----GQSK 142
C KR +A+++ R M A C P+ + L+ GL E R +AL
Sbjct: 139 KGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDT 198
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+ G P+ +Y V+ +++ AY + DEM G+ PN TY+ +LH +G+ +
Sbjct: 199 RGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPK 258
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA +F++M R G EP V TY ++ C N + A +++D M +G P +Y TL
Sbjct: 259 EAIGIFRKMCRD-GVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTL 317
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
++ E L + M+ G +P +F+ L A GM + A++ K+
Sbjct: 318 LHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKM 372
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 1/315 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL F LI LC ++A+E+ +M R P+ + LL ++ +
Sbjct: 411 GLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRA 470
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M + DV++Y +I+ +C + DEA +L M KP+ + T+ING
Sbjct: 471 KNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIING 530
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
R+ +A F Q +G P Y+ ++ + RI A + M KCGI
Sbjct: 531 YCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLP 590
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I+L L + T++A +F + T+ I++ + D A ++
Sbjct: 591 IGTYNIILQGLCQNNCTDDALRMFHNLCLID-FHLQNRTFNIMIDALLKGGRHDEAKDLF 649
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ ARG++P + Y ++ SL + L++ F + G ++ + L L +
Sbjct: 650 ASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQK 709
Query: 305 GMEETAVVLAQKIDK 319
G A V KID+
Sbjct: 710 GEVRKAGVYLSKIDE 724
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 69/157 (43%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+K + +N ++ LC++ + A +F + F +++ I+++ +
Sbjct: 582 MIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGR 641
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ + G P+VV+Y +M+ + +E +LF +E C +
Sbjct: 642 HDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNA 701
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
L+ L + + +A + + + F EA T ++V
Sbjct: 702 LVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV 738
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 1/301 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LC + A+ +F M+ P++ +Y +++G+ + ++ E+Y+EM
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG P+VV++GI+I+ C A + +M + P+ ++ LI+G LS
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL + +K P+ TY+ ++ C R+ +A ++ EM+K G PN TY+ ++
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G E+A V +M+ K G EP + T+ ++ +C +++ AM ++ EM +G+
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
LP + Y+ LI+ + +A + +EM + G+ P S L L +G A+
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 313 L 313
L
Sbjct: 530 L 530
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 135/279 (48%), Gaps = 1/279 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ L +N ++D CK HV++A E++ +M P++ ++ IL++G +
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDE 313
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++S + +M G P++ Y +I+ +C A EA+ L E+E P +
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL R+ EA + KK+GF P A TYN ++ YC + A + +M + G
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T+ ++ KAG+ E A ++ M K G P V Y ++ + A
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-GLLPDVVAYTALIDGHFKDGNTKEA 492
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
R+ EM+ G+ P + S LI+ LC + ++ DA K F
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 155/334 (46%), Gaps = 17/334 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LID C+ +A +FD+M +++ P + YTIL+ G + +
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++R M++ G P++ +Y M++ +C +A+EL++EM P+ F LI+G
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDG 307
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + A +F G P YN ++ YC + +++A + E+ K I P+
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I++ L R EEA + + M +K G P TY ++ +C ++ A+ +
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKK-GFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--------- 295
+M +G+ P + +STLI+ C K++ A + EM+ G+ P ++
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486
Query: 296 -NLKQALR------DEGMEETAVVLAQKIDKLRK 322
N K+A R + G+ L+ ID L K
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 148/321 (46%), Gaps = 8/321 (2%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N ++D L K + +V+ M R P++ +Y L++G +Q + L ++ EM +
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
P VV Y I+I C R EA +FR M + P+ + + T+++G + +
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL+ + + G P T+ ++ C + + A + + +M G+ PN Y+ ++
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
KAG EA S+ + K P V TY I+++ C +++ A + EMK +G L
Sbjct: 342 GYCKAGNLSEALSLHSEI-EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P Y+TLI+ C E ++ A + +M + GI P FS L G E A+ L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 314 AQKI-------DKLRKTPLVD 327
++ D + T L+D
Sbjct: 461 YTEMVIKGLLPDVVAYTALID 481
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 141/308 (45%), Gaps = 5/308 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F LI + VE A V+ KM P +++ ++L+G ++ +M +VY +M
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+VV+YG +I+ C + +A LF EM P+ I+ LI GL E R+S
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + G P TYN ++ YC + A + EM G+ PN T+ I++
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILI 305
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K A M+ G P + Y ++ +C + A+ + E++ +
Sbjct: 306 DGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAV 311
LP + YS LI LC D++++A QEM G P ++ L EG ME+
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 312 VLAQKIDK 319
V +Q +K
Sbjct: 425 VCSQMTEK 432
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 60/114 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + F+ LID CK+ +E A ++ +M + PD+ +YT L++G + N
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+++EM++ G P+V + +I+ C R +A++LF T+ S
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGS 542
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 91/225 (40%), Gaps = 13/225 (5%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAV 100
F+P I T L+ + N+ + ++ E+ +++S+ +I+A+ +R ++A+
Sbjct: 662 FEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKAL 717
Query: 101 ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
+LFR+M+ + +P ++ L + RG + + N+++ Y
Sbjct: 718 QLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMY 777
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
I A R + PN T+ VL AG EE F+ M P
Sbjct: 778 SKCGEIGTARRFSLVL------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPR 831
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+S + +V + C + A +M R P ++ TL+ +
Sbjct: 832 ISHFGCMVDLLCRAGLLTEAYEFILKMPVR---PNAVVWRTLLGA 873
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 160/342 (46%), Gaps = 37/342 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCK---SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M +G + +N LID CK + + +A V +M + P++ ++ IL++G+ +
Sbjct: 249 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
NL +V++EM D +P+V+SY +IN C+ + EA+ + +M + +P+
Sbjct: 309 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 368
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LING L EAL FG K +G P YN ++ AYC +I+D + + +EM
Sbjct: 369 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP---------------------- 215
+ GI P+ TY+ ++ L + G E A +F +++ K
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRK 488
Query: 216 -----------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLI 263
G +P TY IV++ +C + A + +M K R + + Y+ L+
Sbjct: 489 AAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLL 548
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ KL+DA EML+ G+ P + +K+ + D+G
Sbjct: 549 QGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 166/313 (53%), Gaps = 5/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
FN +I+ LCK+ + +A++V + MK P++ SY L++G+ G + + V +
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM ++ P++ ++ I+I+ ++++F+EM + KP+ + +LINGL +
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++SEA+ + G +P TYNA++ +C + + +A M ++ G P TR Y+
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ K G+ ++ +++ + M R+ G P V TY ++ C N ++ A +++D++ +
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMERE-GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G LP + + L+ C + + A +EM +G++P ++ + + EG +
Sbjct: 465 KG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 310 AVVLAQKIDKLRK 322
A + +++K R+
Sbjct: 524 ATNMRTQMEKERR 536
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 155/325 (47%), Gaps = 7/325 (2%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G K L+ L K + V+ +M +R+ P++ ++ +++ + +
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHC----SAKRYDEAVELFREMEATNCKPSPHIFC 119
+V +MK G P+VVSY +I+ +C + K Y +A + +EM + P+ F
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY-KADAVLKEMVENDVSPNLTTFN 300
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI+G + L +++ F + + +P +YN+++ C +I++A M D+M
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PN TY+ +++ K +EA +F + + G PT Y +++ +C ++D
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSV-KGQGAVPTTRMYNMLIDAYCKLGKIDD 419
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+ +EM+ G++P + Y+ LI LC ++ A K F ++ G+ P F L +
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILME 478
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
+G A +L +++ K+ P
Sbjct: 479 GYCRKGESRKAAMLLKEMSKMGLKP 503
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 85 IMINAHCSAKRYDEAVELFR-------EMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
+++ A+ + R++ E F+ ++ A +CKP L+ L E R ++
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKP-------LMIALLKENRSADVEYV 210
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ + +R +P T+N V+ A C + ++N A +M++M+ G PN +Y+ ++ K
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 198 AGRTEEAY---SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
G + Y +V K M P ++T+ I++ F + + +M+++ EM + V P
Sbjct: 271 LGGNGKMYKADAVLKEMVEND-VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y++LIN LC+ K+ +A +M+ G++P
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQP 364
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 155/358 (43%), Gaps = 37/358 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + + L++ +CKS A V D+M+ + P+I +Y +++ G ++
Sbjct: 167 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 226
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ + GF+PD+VSY ++ C+A+R+D+ LF EM C P+ F
Sbjct: 227 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ + A+Q Q + G P N V+ A C R++DAY ++ M G
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK--PGTEPT------------------ 220
P+T +Y VL L +AGR E A + M RK P E T
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 406
Query: 221 --------------VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ TY +V FC +VD A+ +++ + P Y+TL+ L
Sbjct: 407 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 463
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
CH ++LD A + M+ F+ L +G E A+ L ++ + TP
Sbjct: 464 CHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 521
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 133/307 (43%), Gaps = 7/307 (2%)
Query: 7 KQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+ E PD +LI LC+ A V + D+ +Y L+ G+ + L +
Sbjct: 68 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDA 127
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ M PD +Y +I C R +A+ L +M C+PS + L+
Sbjct: 128 ARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLE 184
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ EA+ + + +G P TYN ++ C R++DA +++ + G P
Sbjct: 185 AVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQP 244
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ +Y VL L A R ++ +F M K P T++++VR FC V+ A+++
Sbjct: 245 DIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV-PNEVTFDMLVRFFCRGGMVERAIQV 303
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+M G P + + +IN++C + ++DDA + M G P ++ + + L
Sbjct: 304 LQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCR 363
Query: 304 EGMEETA 310
G E A
Sbjct: 364 AGRWEHA 370
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 139/314 (44%), Gaps = 4/314 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L+ C+ VERA +V +M + P+ I++ +Q + + M
Sbjct: 284 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 343
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD +SY ++ C A R++ A EL EM NC P+ F T I L + +
Sbjct: 344 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 403
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A++ + G TYNA+V +C R++ A + + + PNT TY +L
Sbjct: 404 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLL 460
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L A R + A + M +K V T+ ++V FC V+ AM + ++M G
Sbjct: 461 TGLCHAERLDAAAELLAGMIQKDCPLNAV-TFNVLVSFFCQKGFVEEAMELVNQMMEHGC 519
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + ++TL++ + + ++A + ++ G+ +S++ L E E A+
Sbjct: 520 TPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQ 579
Query: 313 LAQKIDKLRKTPLV 326
+ + + P V
Sbjct: 580 MLHAVQDMGMRPKV 593
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 155/331 (46%), Gaps = 7/331 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G + + ++ LC++ E A+E+ +M ++ P+ ++ + Q+
Sbjct: 342 MGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGL 401
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M + G +V+Y +++ C R D A+ELF + C+P+ + T
Sbjct: 402 IEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTT 458
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL +RL A + ++ A T+N +V +C + +A ++++M + G
Sbjct: 459 LLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHG 518
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T++ +L + K +EEA + + K G TY VV + + + A
Sbjct: 519 CTPNLITFNTLLDGITKDCNSEEALELLHGLVSK-GVSLDTITYSSVVDVLSREDRTEEA 577
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ ++ G+ P + MY+ ++ +LC + D A +F M+ G P + L +
Sbjct: 578 IQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEG 637
Query: 301 LRDEG-MEETAVVLAQKIDK--LRKTPLVDR 328
L EG ++E VL++ K L K+ L D+
Sbjct: 638 LAHEGLLKEARYVLSELYAKGVLSKSLLEDQ 668
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 4/250 (1%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G PDV +I C R +A + R EA+ + TL+ G RL A
Sbjct: 69 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ P+A TY ++ C R+ DA ++D+M + G P+ TY ++L
Sbjct: 129 RRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+ K+ EA +V M R G P + TY +++ C +VD A I + + + G P
Sbjct: 186 VCKSSGFGEAMNVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQP 244
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ Y+T++ LC + DD F EM+D P F L + GM E A+ +
Sbjct: 245 DIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVL 304
Query: 315 QKIDKLRKTP 324
Q++ + TP
Sbjct: 305 QQMSQHGCTP 314
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 97 DEAVELFREMEATNCK-PSPHIF-CT-LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
D+ E R +E ++ + +P ++ CT LI L R S+A + ++ G + Y
Sbjct: 53 DDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAY 112
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
N +V YC R++ A R++ M + P+ TY ++ L GR +A ++ M +
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
+ G +P+V TY +++ C ++ AM + DEM+A+G P + Y+ +IN +C E ++D
Sbjct: 170 R-GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 228
Query: 274 DACKYFQEMLDIGIRPPGQLFSN-LKQALRDEGMEETAVVLAQKIDK 319
DA + + G +P ++ LK ++ V+ A+ +DK
Sbjct: 229 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK 275
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 165/348 (47%), Gaps = 37/348 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I LC++ V A +V +KM + P++ +YTILL G + EV++EMK
Sbjct: 91 YNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMK 150
Query: 73 DDGFEPDVVSYGIMI-----------------------------------NAHCSAKRYD 97
+G +P+ ++YG +I C A R D
Sbjct: 151 RNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLD 210
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR-GFEPEAPTYNAV 156
+A++ EM +P+ + L++G L ++FF + K R G EA Y
Sbjct: 211 DALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGY 270
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ A C + ++ A + ++E+R+ G+ P+ TY ++++ +AG+ + + + + M R+ G
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM-RRNG 329
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+P V TY ++ + C + A R+ + M+A G P + Y+++++ LC K+D+
Sbjct: 330 VKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVH 389
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ ++ ML P +S + L GM ++AV L + I R+ P
Sbjct: 390 RVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 147/320 (45%), Gaps = 39/320 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++D LC + +A E+ ++ + P + Y ++ G + ++ +V +M
Sbjct: 57 YKLVVDGLCGAGMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMV 115
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++ P+V +Y I++N C + + A E+F+EM+ CKP+P + TLI L +
Sbjct: 116 EESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEID 175
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL+ + + + T +VG C + R++DA + M+EMR+ G+ PN TY ++
Sbjct: 176 EALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLV 235
Query: 193 H------------------------------------HLIKAGRTEEAYSVFKRMSRKPG 216
H L KAG + A + + R+ G
Sbjct: 236 HGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEEL-RQSG 294
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P V TY +++ F Q D ++ + ++M+ GV P + YSTLIN LC E K DA
Sbjct: 295 VVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAF 354
Query: 277 KYFQEMLDIGIRPPGQLFSN 296
+ E+++ PP + N
Sbjct: 355 RLL-ELMEAAGSPPNVVTYN 373
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD-D 74
++ LCK+ ++ A + ++M++ P+ +Y+ L+ G+ Q L + + E K
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARK 258
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G + +Y ++A C A D A + E+ + P + LIN + +
Sbjct: 259 GGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDAS 318
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L+ ++ G +P+ TY+ ++ C + DA+R+++ M G PN TY+ V+
Sbjct: 319 LELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDG 378
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K+G+ +E + V++ M K P V TY I++ +D A+++++ +K+ P
Sbjct: 379 LCKSGKMDEVHRVYEMM-LKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEM 282
YS +I SLC KL++AC + M
Sbjct: 438 DAAAYSMVITSLCRAGKLEEACGMYHGM 465
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 118/235 (50%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGF 76
+D LCK+ +++RA++ +++++ PD+ +Y++L+ + + + E+ +M+ +G
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
+PDVV+Y +IN C +++ +A L MEA P+ + ++++GL ++ E +
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
+ K P+ TY+ ++ + ++ A ++ + ++ GP+ Y +V+ L
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLC 450
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+AG+ EEA ++ M + +V C + D A RI + RG
Sbjct: 451 RAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERG 505
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 37/262 (14%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
D +++T+L ++ + ++ + G +Y ++++ C A ++A+EL
Sbjct: 18 DSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV 77
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
RE+ +P +F YN ++ C +
Sbjct: 78 RELSGVY---TPTLF---------------------------------IYNGIITGLCRA 101
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
R+ DAY+++++M + I PN TY I+L+ L ++ +T+ A VF+ M R G +P T
Sbjct: 102 SRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRN-GCKPNPIT 160
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y +++ ++D A+R+ E ++ + + +T++ LC +LDDA K+ +EM
Sbjct: 161 YGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMR 220
Query: 284 DIGIRPPGQLFSNLKQALRDEG 305
+G+RP +SNL R G
Sbjct: 221 QMGVRPNEVTYSNLVHGFRQHG 242
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 98/211 (46%), Gaps = 1/211 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ LI+T ++ + + E+ + M++ PD+ +Y+ L+ +++
Sbjct: 294 GVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDA 353
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M+ G P+VV+Y +++ C + + DE ++ M + C P + ++NG
Sbjct: 354 FRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNG 413
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L L A++ F K P+A Y+ V+ + C + ++ +A M M G N
Sbjct: 414 LSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDN 473
Query: 185 T-RTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
R ++ L A RT+ A + + S +
Sbjct: 474 ICRALAGLVAALCDAERTDSARRIVEVASER 504
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ ++ LI+ LCK R + A + + M+ P++ +Y +++G +
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ VY M PDVV+Y I++N A D AV+LF ++++ P +
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSM 444
Query: 121 LINGLGSEKRLSEALQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD----- 174
+I L +L EA + G + +V A C + R + A R+++
Sbjct: 445 VITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASER 504
Query: 175 --EMRKCGIGPNTRTYDIVLHHLIKA 198
M K G +T IV HL+++
Sbjct: 505 GHRMTKSG---DTDLVKIVEDHLLES 527
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 146/298 (48%), Gaps = 8/298 (2%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
QEL F +I +S E+ ++F ++++ +P +K Y ++L+ Q +N +
Sbjct: 109 QEL--FQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINAL 166
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
Y MK +G EP+V +Y +++ A C + D A +L EM C P + T+I+ +
Sbjct: 167 YNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCK 226
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+ +A + FEP P YNA++ C R +A+ +M+EM G+ PN +
Sbjct: 227 LGDVDKAREL-----AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVIS 281
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y V+ L G E + +VF RM + G P V T+ +++ F +V A+ +W+ M
Sbjct: 282 YSTVISCLSDMGNVELSLAVFGRMFVR-GCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLM 340
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
GV P + Y+TLI+ LC + +D+A + +M IRP +S + G
Sbjct: 341 IREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSG 398
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 151/324 (46%), Gaps = 6/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ + +N L+ LC++ V+ A ++ +M + DPD SYT ++ + +
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD 229
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ MK FEP V Y +I+ C R+ EA +L EM P+ + T
Sbjct: 230 VDKAREL--AMK---FEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYST 284
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L + +L FG+ RG P T+ +++ + R+ DA + + M + G
Sbjct: 285 VISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREG 344
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN Y+ ++H L G +EA SV+ +M K P V+TY ++ F + + A
Sbjct: 345 VSPNVVAYNTLIHGLCSDGNMDEAISVWNQM-EKDSIRPNVTTYSTIIYGFAKSGDLVSA 403
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
W++M G P + +Y+ +++ LC D A M+ G P F+N +
Sbjct: 404 CETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKG 463
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G E A+ + +++K P
Sbjct: 464 LCRAGRVEWAMNVLDQMEKYECLP 487
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 140/308 (45%), Gaps = 1/308 (0%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+P +N LI +CK + A ++ ++M R DP++ SY+ ++ N+ V+
Sbjct: 244 VPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFG 303
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
M G P+V ++ +I R +AV L+ M P+ + TLI+GL S+
Sbjct: 304 RMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDG 363
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ EA+ + Q +K P TY+ ++ + S + A ++M CG PN Y
Sbjct: 364 NMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYT 423
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ L + ++A+ + M G PTV T+ ++ C +V+ AM + D+M+
Sbjct: 424 CMVDVLCQMSMFDQAFDLIDNMI-SDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEK 482
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
LP + Y+ L++ L + +AC +E+ + + ++ + GM +
Sbjct: 483 YECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQ 542
Query: 310 AVVLAQKI 317
+ L K+
Sbjct: 543 VLQLLGKM 550
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 135/290 (46%), Gaps = 2/290 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N LI LC +++ A V+++M+K P++ +Y+ ++ G+ + +
Sbjct: 340 MIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGD 399
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+S E + +M + G P+VV Y M++ C +D+A +L M + C P+ F
Sbjct: 400 LVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNN 459
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I GL R+ A+ Q +K P TYN ++ + +A ++ E+ +
Sbjct: 460 FIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERK 519
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + TY+ +++ G ++ + +M G + T V +C +V A
Sbjct: 520 VEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVN-GIKLDTITVNTTVNAYCKLGKVKTA 578
Query: 241 MRIWDEMKARGVLPV-MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+++ D + A + ++ ++ +C+ ++A Y EML GI P
Sbjct: 579 IKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFP 628
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 2/232 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ +I L +VE + VF +M R P+++++T L++G+ + +
Sbjct: 274 GVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA 333
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M +G P+VV+Y +I+ CS DEA+ ++ +ME + +P+ + T+I G
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A + + + G P Y +V C + A+ ++D M G P
Sbjct: 394 FAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPT 453
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-EIVVRMFCYNA 235
T++ + L +AGR E A +V +M K P + TY E++ +F NA
Sbjct: 454 VITFNNFIKGLCRAGRVEWAMNVLDQM-EKYECLPNIRTYNELLDGLFRANA 504
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 6/267 (2%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+Y +++ G+ + ++ + ++MK + + +I + + ++ +++F +
Sbjct: 76 TYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRI 135
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
C+PS I+ +++ L S+ + K G EP TYN ++ A C + ++
Sbjct: 136 REFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKV 195
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+ A +++ EM G P+ +Y V+ + K G ++A + + EP V Y
Sbjct: 196 DGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKF------EPVVPVYNA 249
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ C + A + +EM RGV P + YST+I+ L ++ + F M G
Sbjct: 250 LIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRG 309
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVL 313
RP Q F++L + G AV L
Sbjct: 310 CRPNVQTFTSLIKGFFVRGRVGDAVGL 336
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 7/258 (2%)
Query: 57 QQKNLLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
Q+ +++S E ++ + + G F+ ++Y MI+ D L ++M+ N S
Sbjct: 50 QEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQ 109
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+F +I + L+ F + ++ G EP YN V+ A + +
Sbjct: 110 ELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNN 169
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M+ G+ PN TY+++L L + G+ + A + MS K G +P +Y V+ C
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNK-GCDPDDVSYTTVISSMCKLG 228
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
VD A + MK V+PV Y+ LI+ +C E + +A EM+D G+ P +S
Sbjct: 229 DVDKAREL--AMKFEPVVPV---YNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYS 283
Query: 296 NLKQALRDEGMEETAVVL 313
+ L D G E ++ +
Sbjct: 284 TVISCLSDMGNVELSLAV 301
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 88/195 (45%), Gaps = 2/195 (1%)
Query: 125 LGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L E + +L++F G F+ TY ++ + ++ ++ +M+ +
Sbjct: 48 LRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPC 107
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ + V+ ++ E+ +F R+ R+ G EP+V Y +V+ M +
Sbjct: 108 SQELFQFVIKCYRRSNLGEQGLKMFYRI-REFGCEPSVKIYNLVLDALLSQNLFKMINAL 166
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++ MK+ G+ P + Y+ L+ +LC K+D ACK EM + G P ++ + ++
Sbjct: 167 YNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCK 226
Query: 304 EGMEETAVVLAQKID 318
G + A LA K +
Sbjct: 227 LGDVDKARELAMKFE 241
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 44/204 (21%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN I LC++ VE A V D+M+K P+I++Y LL+G + + RE++
Sbjct: 457 FNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELE 516
Query: 73 DDGFEPDVVSYGIM-----------------------------------INAHCSAKRYD 97
+ E D V+Y + +NA+C +
Sbjct: 517 ERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVK 576
Query: 98 EAVELFREMEATNCKPSPHIFCTLI-----NGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
A+++ + A + I T+I N LG+E EA+ + + KRG P T
Sbjct: 577 TAIKVLDNISAEKEFRADIITHTIILWGICNWLGTE----EAVVYLHEMLKRGIFPNIAT 632
Query: 153 YNAVVGAYCWSMRINDAYRMMDEM 176
+N +V + + R++D++
Sbjct: 633 WNVLVRGFFSKLGHMGPIRILDDI 656
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 1/290 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LID CK+ VE + ++M+K + D+ Y+ L+ G+ + ++ E++ EM
Sbjct: 202 FSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEML 261
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+VV+Y ++NA C +++ EA ++ M +P + L +GL R S
Sbjct: 262 RKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRAS 321
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A++ KRG EP TYNA++ C R++DA +++ M K G P+ TY ++
Sbjct: 322 DAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLV 381
Query: 193 HHLIKAGRTEEAYSVFK-RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L G+ +EA + MS++ +P V + +V++ C ++ A R++ M RG
Sbjct: 382 KGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERG 441
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ Y+ LI+ KL A + +++ +D GI P ++ L L
Sbjct: 442 FPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGL 491
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 3/301 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + +FN L+ C+S +A ++F MK+ PD SY ++ G + K L+
Sbjct: 122 KRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLV 181
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E+++EMK +P+ V++ +I+ C +E L EME + ++ LI
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G S+ + + F + ++ P TY+ ++ A C + +A +M+D M C +
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ Y ++ L K GR +A V M ++ G EP TY ++ C +VD A+
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKR-GEEPNNVTYNAIINGLCKEGRVDDALG 360
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML--DIGIRPPGQLFSNLKQA 300
I + M +G P + YSTL+ LC K+D+A ++ + I+P F+ + Q
Sbjct: 361 ILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQE 420
Query: 301 L 301
L
Sbjct: 421 L 421
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 142/301 (47%), Gaps = 1/301 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI++ ++ A V + KR F ++ ++ +LL+G+ Q + +++ MK
Sbjct: 97 LSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMK 156
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ PD VSY +IN C KR EA ELF+EM+ CKP+ F LI+G +
Sbjct: 157 RNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVE 216
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + +K G E + Y+A++ +C I + +EM + + PN TY ++
Sbjct: 217 EGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLM 276
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K + +EA + M+ P V Y ++ N + A+++ D M RG
Sbjct: 277 NALCKKQKWKEAAQMLDTMT-GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE 335
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P Y+ +IN LC E ++DDA + M G +P +S L + L G + AV
Sbjct: 336 EPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVD 395
Query: 313 L 313
L
Sbjct: 396 L 396
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 143/300 (47%), Gaps = 3/300 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L++ LCK + + A ++ D M + PD+ +YT+L +G + +V M
Sbjct: 272 YSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMV 331
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP+ V+Y +IN C R D+A+ + M KP + TL+ GL ++
Sbjct: 332 KRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKID 391
Query: 133 EALQFFG--QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
EA+ SK+ +P+ +N V+ C R+ A R+ M + G N TY+I
Sbjct: 392 EAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNI 451
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ + AG+ +A ++K + G P +TY +++ C + +A ++++ +A
Sbjct: 452 LIDGYLSAGKLTKALELWKD-AVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRAS 510
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G P + Y+TL+ SLC E ++ A FQEM + P F+ + G E+A
Sbjct: 511 GTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 154/326 (47%), Gaps = 3/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL+ ++ ++ LI C +ER +E+F++M ++ P++ +Y+ L+ +++
Sbjct: 225 MEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQK 284
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ M PDVV+Y ++ + R +A+++ M +P+ +
Sbjct: 285 WKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNA 344
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RK 178
+INGL E R+ +AL K+G +P+ TY+ +V C +I++A +++ + ++
Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P+ +++V+ L K R A V+ M + G + TY I++ + ++
Sbjct: 405 FHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVER-GFPSNIVTYNILIDGYLSAGKLT 463
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A+ +W + G+ P Y+ LIN LC L A F + G RP ++ L
Sbjct: 464 KALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLM 523
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP 324
+L E E A L Q++ P
Sbjct: 524 ASLCRESSVEQARNLFQEMRNANHDP 549
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 144/303 (47%), Gaps = 3/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRF--DPDIKSYTILLEGWGQQ 58
M K G K ++ ++ L+ LC ++ A ++ + + + F PD+ ++ ++++ +Q
Sbjct: 365 MAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQ 424
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ L VY M + GF ++V+Y I+I+ + SA + +A+EL+++ + P+ +
Sbjct: 425 RRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATY 484
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LINGL + LS A F + + G P YN ++ + C + A + EMR
Sbjct: 485 TVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRN 544
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
P+ +++I++ +KAG E A + M P T+ I++ F Q+D
Sbjct: 545 ANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLV-PDNITFSILINRFLKLGQLD 603
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +++ M + G +P ++ +L+ + K + Q+M D + +L S +
Sbjct: 604 EAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTIL 663
Query: 299 QAL 301
L
Sbjct: 664 ACL 666
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 149/349 (42%), Gaps = 38/349 (10%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
++ ++ + L D L K+ A +V D M KR +P+ +Y ++ G ++ +
Sbjct: 300 VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDAL 359
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT--NCKPSPHIFCTLIN 123
+ M G +PDVV+Y ++ C + DEAV+L + + + KP F +I
Sbjct: 360 GILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQ 419
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L ++RL A + + +RGF TYN ++ Y + ++ A + + GI P
Sbjct: 420 ELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISP 479
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY ++++ L K A +F + R GT PTVS Y ++ C + V+ A +
Sbjct: 480 NAATYTVLINGLCKMQMLSIAKGLFNK-KRASGTRPTVSEYNTLMASLCRESSVEQARNL 538
Query: 244 WDEM--------------------KARGV---------------LPVMHMYSTLINSLCH 268
+ EM KA V +P +S LIN
Sbjct: 539 FQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLK 598
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+LD+A ++ M+ G P LF +L + +G E V + Q++
Sbjct: 599 LGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQM 647
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 135/269 (50%), Gaps = 1/269 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+F +K ++ FN +I LCK R + A+ V+ M +R F +I +Y IL++G+ L
Sbjct: 404 EFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLT 463
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E++++ D G P+ +Y ++IN C + A LF + A+ +P+ + TL+
Sbjct: 464 KALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLM 523
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
L E + +A F + + +P+ ++N ++ + + A ++ EM +
Sbjct: 524 ASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLV 583
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ T+ I+++ +K G+ +EA S+++RM G P ++ +++ + + + +
Sbjct: 584 PDNITFSILINRFLKLGQLDEAASLYERMV-SCGHVPDAVLFDSLLKGYSLKGKTEKVVS 642
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ +M + V+ + ST++ LC+ K
Sbjct: 643 MLQQMADKDVVLDSKLTSTILACLCNMSK 671
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 103/269 (38%), Gaps = 36/269 (13%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P S +I+ AK YD + + +M + + P LI + ++ S A
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 138 FGQSKKRGFE-----------------------------------PEAPTYNAVVGAYCW 162
G KRGF P+ +YN V+ C
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
R+ +A + EM+ PN+ T+ ++ K G EE + + + M K G E V
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEM-EKMGLEGDVF 235
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
Y ++ FC ++ +++EM + V P + YS L+N+LC + K +A + M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295
Query: 283 LDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+RP ++ L L G A+
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAI 324
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 100/226 (44%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + LI+ LCK + + A+ +F+K + P + Y L+ ++ ++
Sbjct: 476 GISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM++ +PDVVS+ I+I+ A + A EL EM N P F LIN
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINR 595
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L EA + + G P+A +++++ Y + M+ +M + +
Sbjct: 596 FLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLD 655
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++ +L L + + + + S+ ++ E+++++
Sbjct: 656 SKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKCNELLMKL 701
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 1/196 (0%)
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
N PS TLI+ L K + + P + +A++ ++ + + + A
Sbjct: 54 NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFA 113
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ ++ + K G N ++++L ++G + +A +F M R P +Y V+
Sbjct: 114 FGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNC-LIPDCVSYNTVIN 172
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C ++ A ++ EMK P +S LI+ C +++ +EM +G+
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232
Query: 290 PGQLFSNLKQALRDEG 305
++S L +G
Sbjct: 233 DVFVYSALISGFCSKG 248
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 83/193 (43%), Gaps = 5/193 (2%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTY---NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
LSE+L F + + + P+Y N ++ + + + +M + P +
Sbjct: 38 LSESLSHFHHTL-QDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTS 96
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++ + + A+ V + ++ G V + ++++ FC + AM ++ M
Sbjct: 97 LSALIESFVNTQKPSFAFGVLGLIMKR-GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMM 155
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
K ++P Y+T+IN LC +L +A + F+EM +P FS L G
Sbjct: 156 KRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDV 215
Query: 308 ETAVVLAQKIDKL 320
E L ++++K+
Sbjct: 216 EEGFGLLEEMEKM 228
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 165/348 (47%), Gaps = 37/348 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I LC++ V A +V +KM + P++ +YTILL G + EV++EMK
Sbjct: 91 YNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMK 150
Query: 73 DDGFEPDVVSYGIMI-----------------------------------NAHCSAKRYD 97
+G +P+ ++YG +I C A R D
Sbjct: 151 RNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLD 210
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR-GFEPEAPTYNAV 156
+A++ EM +P+ + L++G L ++FF + K R G EA Y
Sbjct: 211 DALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGY 270
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ A C + ++ A + ++E+R+ G+ P+ TY ++++ +AG+ + + + + M R+ G
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM-RRNG 329
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+P V TY ++ + C + A R+ + M+A G P + Y+++++ LC K+D+
Sbjct: 330 VKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVH 389
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ ++ ML P +S + L GM ++AV L + I R+ P
Sbjct: 390 RVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 147/320 (45%), Gaps = 39/320 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++D LC + +A E+ ++ + P + Y ++ G + ++ +V +M
Sbjct: 57 YKLVVDGLCGAGMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMV 115
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++ P+V +Y I++N C + + A E+F+EM+ CKP+P + TLI L +
Sbjct: 116 EESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEID 175
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL+ + + + T +VG C + R++DA + M+EMR+ G+ PN TY ++
Sbjct: 176 EALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLV 235
Query: 193 H------------------------------------HLIKAGRTEEAYSVFKRMSRKPG 216
H L KAG + A + + R+ G
Sbjct: 236 HGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEEL-RQSG 294
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P V TY +++ F Q D ++ + ++M+ GV P + YSTLIN LC E K DA
Sbjct: 295 VVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAF 354
Query: 277 KYFQEMLDIGIRPPGQLFSN 296
+ E+++ PP + N
Sbjct: 355 RLL-ELMEAAGSPPNVVTYN 373
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD-D 74
++ LCK+ ++ A + ++M++ P+ +Y+ L+ G+ Q L + + E K
Sbjct: 199 IVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARK 258
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G + +Y ++A C A D A + E+ + P + LIN + +
Sbjct: 259 GGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDAS 318
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L+ ++ G +P+ TY+ ++ C + DA+R+++ M G PN TY+ V+
Sbjct: 319 LELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDG 378
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K+G+ +E + V++ M K P V TY I++ +D A+++++ +K+ P
Sbjct: 379 LCKSGKMDEVHRVYEMM-LKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGP 437
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEM 282
YS +I SLC KL++AC + M
Sbjct: 438 DAAAYSMVITSLCRAGKLEEACGMYHGM 465
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 119/235 (50%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGF 76
+D LCK+ +++RA++ +++++ PD+ +Y++L+ + + + E+ +M+ +G
Sbjct: 271 LDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
+PDVV+Y +IN C +++ +A L MEA P+ + ++++GL ++ E +
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
+ K P+ TY+ ++ + ++ A ++ + ++ GP+ Y +V+ L
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLC 450
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+AG+ EEA ++ M + +V C + D A RI + + RG
Sbjct: 451 RAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERG 505
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 37/262 (14%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
D +++T+L ++ + ++ + G +Y ++++ C A ++A+EL
Sbjct: 18 DSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV 77
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
RE+ +P +F YN ++ C +
Sbjct: 78 RELSGVY---TPTVF---------------------------------IYNGIITGLCRA 101
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
R+ DAY+++++M + I PN TY I+L+ L ++ +T+ A VF+ M R G +P T
Sbjct: 102 SRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRN-GCKPNPIT 160
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y +++ ++D A+R+ E ++ + + +T++ LC +LDDA K+ +EM
Sbjct: 161 YGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMR 220
Query: 284 DIGIRPPGQLFSNLKQALRDEG 305
+G+RP +SNL R G
Sbjct: 221 QMGVRPNEVTYSNLVHGFRQHG 242
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ LI+T ++ + + E+ + M++ PD+ +Y+ L+ +++
Sbjct: 294 GVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDA 353
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M+ G P+VV+Y +++ C + + DE ++ M + C P + ++NG
Sbjct: 354 FRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNG 413
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L L A++ F K P+A Y+ V+ + C + ++ +A M M G N
Sbjct: 414 LSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDN 473
Query: 185 T-RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
R ++ L A RT+ A + + ++R+ G T S
Sbjct: 474 ICRALAGLVAALCDAKRTDSARRIVE-VARERGHRVTKS 511
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ ++ LI+ LCK R + A + + M+ P++ +Y +++G +
Sbjct: 325 MRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGK 384
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ VY M PDVV+Y I++N A D AV+LF ++++ P +
Sbjct: 385 MDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSM 444
Query: 121 LINGLGSEKRLSEALQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I L +L EA + G + +V A C + R + A R+++ R+
Sbjct: 445 VITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARER 504
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEA 204
G H + K+G T+ A
Sbjct: 505 G------------HRVTKSGDTDLA 517
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 141/275 (51%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D LCK V+ A+ V M K PD+ +Y+ L++G+ + V+ M
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV +Y I+IN C K DEA+ LF+EM N P + +LI+GL R+S
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIS 391
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + RG + TY++++ C + ++ A + ++M+ I PN T+ I+L
Sbjct: 392 YVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILL 451
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR ++A VF+ + K G V TY +++ C ++ A+ + +M+ G
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTK-GYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGC 510
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+P + T+I +L +D+ D A K ++M+ G+
Sbjct: 511 IPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 158/344 (45%), Gaps = 23/344 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G++ +L N LI+ C + V K+ KR + PD + L++G GQ K
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L ++ ++ GF+ + VSY +IN C A++ R+++ KP ++ T+
Sbjct: 149 LHFHD---KLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTI 205
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ + + +SEA F + +G + TYN ++ +C ++ +A +++EM I
Sbjct: 206 IDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTI 265
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY+I++ L K G+ +EA SV M K +P V TY ++ + +V A
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVM-LKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+++ M GV P +H Y+ LIN C +D+A F+EM + P +S+L L
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 302 ----------------RDEGMEETAVVLAQKIDKLRKTPLVDRG 329
RD G + + ID L K +DR
Sbjct: 385 CKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRA 428
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 142/302 (47%), Gaps = 3/302 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N LI C ++ A + ++M + +P++ +Y IL++ ++ +
Sbjct: 229 GISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V M +PDV++Y +++ + +A +F M P H + LING
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + EAL F + ++ P TY++++ C S RI+ + ++DEMR G +
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPAD 408
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L K G + A ++F +M + P + T+ I++ C ++ A ++
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQE-IRPNIFTFTILLDGLCKGGRLKDAQEVF 467
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL--R 302
++ +G ++ Y+ +IN C + L++A +M D G P F + AL +
Sbjct: 468 QDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKK 527
Query: 303 DE 304
DE
Sbjct: 528 DE 529
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 118/253 (46%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K +K ++ ++ L+D V++AQ VF+ M PD+ +YTIL+ G+ + K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM P +V+Y +I+ C + R +L EM + +
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSS 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L A+ F + K + P T+ ++ C R+ DA + ++ G
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N TY+++++ K G EEA ++ +M G P T+E ++ + D A
Sbjct: 475 YHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDN-GCIPNAFTFETIIIALFKKDENDKA 533
Query: 241 MRIWDEMKARGVL 253
++ +M ARG+L
Sbjct: 534 EKLLRQMIARGLL 546
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 2/238 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P ++ + ++++ K Y AV L +E +P LIN +++
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ KRG+ P+ T N ++ C ++ A D++ G N +Y +++ + K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G T A +++ + T+P V Y ++ C V A ++ EM +G+ +
Sbjct: 177 IGDTRAAIKFLRKIDGRL-TKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVV 235
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLA 314
Y+TLI C KL +A EM+ I P ++ L AL EG ++E VLA
Sbjct: 236 TYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA 293
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 2/290 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL E+ FN L++ LCK V A + M + + PDI ++ IL+ G+ Q
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ M D+G +PDV +Y ++N C ++++ +E ++ M C P+ F
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC- 179
L+ L ++L EAL + K + P+A T+ ++ +C + ++ AY + +M +
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ +T TY+I++H + A +F+ M + P TY ++V FC V++
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC-LGPDGYTYRLMVDGFCKTGNVNL 655
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ EM G +P + +IN LC ED++ +A M+ G+ P
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 146/319 (45%), Gaps = 1/319 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ +N LI LCK+ + A+ KM +PD +Y L+ G+ + +
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + +GF PD +Y +I+ C + A+ LF E KP+ ++ TLI G
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ + EA Q + ++G PE T+N +V C ++DA ++ M G P+
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I++H + E A + M G +P V TY ++ C ++ + M +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDN-GVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M +G P + ++ L+ SLC KLD+A +EM + + P F L
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 305 GMEETAVVLAQKIDKLRKT 323
G + A L +K+++ K
Sbjct: 580 GDLDGAYTLFRKMEEAYKV 598
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 152/326 (46%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD + + + +N ++ L S + ++A +V+ +M+ R PD+ S+TI ++ + +
Sbjct: 102 MDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSR 161
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G E +VV+Y ++ E ELF +M A+ F
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNK 221
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L + + E + + KRG P TYN + C ++ A RM+ + + G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ +++ L K + +EA +M + G EP TY ++ +C V +A
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
RI + G +P Y +LI+ LCHE + + A F E L GI+P L++ L +
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L ++GM A LA ++ + P V
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEV 426
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 36/332 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL--- 61
G+ L FN+L+ LCK V+ +++ DK+ KR P++ +Y + ++G Q+ L
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 62 -------------------------LSMNEVYRE-------MKDDGFEPDVVSYGIMINA 89
L N ++E M ++G EPD +Y +I
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+C A + + P + +LI+GL E + AL F ++ +G +P
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
YN ++ I +A ++ +EM + G+ P +T++I+++ L K G +A + K
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M K G P + T+ I++ + +++ A+ I D M GV P ++ Y++L+N LC
Sbjct: 451 VMISK-GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
K +D + ++ M++ G P F+ L ++L
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 142/285 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + +N LI L + A ++ ++M ++ P+++++ IL+ G + +
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + + M G+ PD+ ++ I+I+ + + + + A+E+ M P + + +L+NG
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + ++ + ++G P T+N ++ + C ++++A +++EM+ + P+
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++ K G + AY++F++M + TY I++ F V MA +++
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM R + P + Y +++ C ++ K+ EM++ G P
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 5/289 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + LID LC RA +F++ + P++ Y L++G Q +L +
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM + G P+V ++ I++N C +A L + M + P F LI+G
Sbjct: 413 LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ ++ AL+ G +P+ TYN+++ C + + D M + G PN
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T++I+L L + + +EA + + M K P T+ ++ FC N +D A ++ +
Sbjct: 533 TFNILLESLCRYRKLDEALGLLEEMKNKS-VNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 247 M-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
M +A V Y+ +I++ + + A K FQEM+D + P G +
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 1/220 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N L++ LCK+ E E + M ++ P++ ++ ILLE + + L
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFCTLIN 123
+ EMK+ PD V++G +I+ C D A LFR+ME A S + +I+
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIH 610
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ ++ A + F + R P+ TY +V +C + +N Y+ + EM + G P
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIP 670
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ T V++ L R EA + RM +K V+T
Sbjct: 671 SLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNT 710
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 152/296 (51%), Gaps = 1/296 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ C + V+ A+E+F+ M +R DI +Y IL+ G+ + +++ M + G
Sbjct: 254 LLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERG 313
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD ++Y I+++ +C + DEA LF M P + LI G +R+ EA+
Sbjct: 314 EQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAM 373
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYDIVLHH 194
+ P TYN+VV C S I DA++++DEM C P+ TY+I+L
Sbjct: 374 NLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLES 433
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L + E+A + FK + + P V +Y I++ C N ++D A+ +++ M + ++P
Sbjct: 434 LCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVP 493
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ Y+ L+++L + +LD A +++D GI P + ++ L L G +TA
Sbjct: 494 DIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTA 549
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 154/361 (42%), Gaps = 57/361 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI+ C ++ A V K+ K P++ ++T L++G+ +L +Y EM
Sbjct: 92 FNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMV 151
Query: 73 DDGFEPDVVSYGIMINAHCSAK--RYDEAVELFREMEATN-CKPS--------------- 114
D V YG +IN C +K + AV+L ++ME KP+
Sbjct: 152 ARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDG 211
Query: 115 ------------------PHIF------------------CTLINGLGSEKRLSEALQFF 138
P IF +L+NG ++ EA + F
Sbjct: 212 NINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELF 271
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
+RG + + YN ++ YC + ++ +A ++ M + G P+T TY I++H
Sbjct: 272 NVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLI 331
Query: 199 GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
+ +EA ++F M + G P V +Y I+++ +C +V AM + ++M + ++P +
Sbjct: 332 DKVDEARNLFHGMIER-GLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIIT 390
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN--LKQALRDEGMEETAVVLAQK 316
Y+++++ LC + DA K EM PP N L+ R E +E+
Sbjct: 391 YNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHL 450
Query: 317 I 317
I
Sbjct: 451 I 451
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 132/323 (40%), Gaps = 55/323 (17%)
Query: 21 CKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDV 80
CK ++ A +F +M P I +T +L + + + ++Y M+ G P
Sbjct: 30 CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF-- 138
V++ I+IN C + D A + ++ C+P+ F TL+ G ++ +AL +
Sbjct: 90 VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDE 149
Query: 139 ------------------GQSKKRGFEPEAPT------------------YNAVVGAYCW 162
G K + +P A YN VV C
Sbjct: 150 MVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCK 209
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG----------------RTEEAYS 206
IN+A + +M GI P+ TY +++ L +AG + +EA
Sbjct: 210 DGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARE 269
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+F M + G + + Y I++ +C N +V A +++ M RG P Y+ L++
Sbjct: 270 LFNVMIER-GEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGY 328
Query: 267 CHEDKLDDACKYFQEMLDIGIRP 289
C DK+D+A F M++ G+ P
Sbjct: 329 CLIDKVDEARNLFHGMIERGLVP 351
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ +N LI CK V A + + M + P+I +Y +++G + +L
Sbjct: 348 GLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDA 407
Query: 65 NEVYREMKDDGFEP-DVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFCTLI 122
++ EM P DV +Y I++ + C + ++A+ F+ + + P+ + LI
Sbjct: 408 WKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILI 467
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +RL EA+ F + P+ TYN ++ A +++ A ++ ++ GI
Sbjct: 468 SGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGIS 527
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
PN RTY+I+++ L K GR + A + +S + G P V TY I
Sbjct: 528 PNLRTYNILINGLHKGGRPKTAQKISLYLSIR-GYHPDVKTYII 570
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNL 61
LK +P+ +N ++D LCKS + A ++ D+M + PD+ +Y ILLE + + +
Sbjct: 381 LKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECV 440
Query: 62 LSMNEVYREMK-DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ + + F P+V SY I+I+ C +R DEA+ LF M N P +
Sbjct: 441 EKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNI 500
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + ++L +A+ Q +G P TYN ++ R A ++ + G
Sbjct: 501 LLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRG 560
Query: 181 IGPNTRTYDIVLHHLIKAG 199
P+ +TY +++ L K G
Sbjct: 561 YHPDVKTY--IINELCKGG 577
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
I+DA + M P+ + +L + K A ++ M K G P T+
Sbjct: 35 IDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYK-GVVPFTVTFN 93
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
I++ FC+ Q+D A + ++ G P + ++TL+ C DK+ DA + EM+
Sbjct: 94 ILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVAR 153
Query: 286 GIRPPGQLFSNLKQALRDE--GMEETAVVLAQKIDK 319
IR L+ L L G AV L QK+++
Sbjct: 154 RIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEE 189
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 16/308 (5%)
Query: 16 LIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+I+ C S AQ++ +M ++++ PD+ +Y L+ + ++ E+Y EM
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G P ++Y MI+ C R D A +F M C P F TLI G KR+ +
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
++ + + G TY ++ +C +N A ++ EM G+ PN T + +L
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440
Query: 195 LIKAGRTEEAYSVFKRMSRKP----------GTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
L G+ ++A +FK M + G EP V TY I++ + A ++
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-----KQ 299
+EM RG++P Y+++I+ LC + +LD+A + F M P F+ L K
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560
Query: 300 ALRDEGME 307
D+G+E
Sbjct: 561 GRVDDGLE 568
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 152/323 (47%), Gaps = 12/323 (3%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ ++ +N LI+ K A+E++D+M R P +Y+ +++G+ +Q L +
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAE 346
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ M G PD++++ +I +C AKR D+ ++L EM + + TLI+G
Sbjct: 347 HMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGF 406
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC------ 179
L+ A + G P T N ++ C + ++ DA M M+K
Sbjct: 407 CQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDA 466
Query: 180 -----GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
G+ P+ +TY+I++ LI G+ EA +++ M + G P TY V+ C
Sbjct: 467 SHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYNSVIHGLCKQ 525
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+++D A +++D M ++ P + ++TLIN C ++DD + F EM GI +
Sbjct: 526 SRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITY 585
Query: 295 SNLKQALRDEGMEETAVVLAQKI 317
L R G A+ + Q++
Sbjct: 586 ITLIHGFRKVGNINGALDIFQEM 608
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 12/308 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +ID CK ++ A+ +F M + PDI ++ L+ G+ + K +
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM + G + ++Y +I+ C + A +L +EM ++ P+ TL++G
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440
Query: 125 LGSEKRLSEALQFFGQSKK-----------RGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
L +L +AL+ F +K G EP+ TYN ++ + +A +
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+EM GI P+T TY+ V+H L K R +EA +F M K + P V T+ ++ +C
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFS-PNVVTFTTLINGYCK 559
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+VD + ++ EM RG++ Y TLI+ ++ A FQEM+ G+ P
Sbjct: 560 AGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTIT 619
Query: 294 FSNLKQAL 301
N+ L
Sbjct: 620 IRNMLTGL 627
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 159/326 (48%), Gaps = 12/326 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G + F+ L+ LC + A ++F +M K P++ ++T L+ G ++
Sbjct: 139 ITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGR 194
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIF- 118
++ + M +DG +P+ ++YG +++ C A+ L R+ME ++ KP+ I+
Sbjct: 195 VVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWP 254
Query: 119 ----CTLINGLGSEKRLSEALQFFGQS-KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ING S R SEA Q + +++ P+ TYNA++ A+ + +A +
Sbjct: 255 LERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELY 314
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
DEM GI P+T TY ++ K R + A +F M+ K G P + T+ ++ +C
Sbjct: 315 DEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATK-GCSPDIITFNTLIAGYCR 373
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+VD +++ EM G++ Y+TLI+ C L+ A QEM+ G+ P
Sbjct: 374 AKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVT 433
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDK 319
+ L L D G + A+ + + + K
Sbjct: 434 CNTLLDGLCDNGKLKDALEMFKAMQK 459
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 16/295 (5%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF +L+ + + ++ + KM+ RR + S+TIL++ + L + ++
Sbjct: 80 DFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKI 139
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GF P VV++ +++ C R EA++LF +M CKP+ F TL+NGL E R+
Sbjct: 140 TKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRV 195
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK----CGIGPNTRT 187
EA+ + + G +P TY +V C ++ D ++ +RK I PN
Sbjct: 196 VEAVALLDRMLEDGLQPNQITYGTIVDGMC---KMGDTVSALNLLRKMEEVSHIKPNVVI 252
Query: 188 YDI-----VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+ + +++ +GR EA + + M + P V TY ++ F + A
Sbjct: 253 WPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEE 312
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++DEM RG++P YS++I+ C +++LD A F M G P F+ L
Sbjct: 313 LYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTL 367
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFD-----------PDIKSYTILLEGWGQQKNLL 62
N L+D LC + ++ A E+F M+K + D PD+++Y IL+ G + L
Sbjct: 435 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFL 494
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E+Y EM G PD ++Y +I+ C R DEA ++F M + + P+ F TLI
Sbjct: 495 EAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NG R+ + L+ F + +RG A TY ++ + IN A + EM G+
Sbjct: 555 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVY 614
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
P+T T +L L + A ++ + + G
Sbjct: 615 PDTITIRNMLTGLWSKEELKRAVAMLEDLQMSVG 648
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 12/262 (4%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
L G+ + K L +++ +M P V+ + ++ R D + L R+ME
Sbjct: 49 LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
+ + F L+ S +L AL FG+ K GF P T++ ++ C RI++A
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ +M K PN T+ +++ L + GR EA ++ RM + G +P TY +V
Sbjct: 169 DLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRM-LEDGLQPNQITYGTIVDG 223
Query: 231 FCYNAQVDMAMRIWDEM------KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
C A+ + +M K V+ + + +IN C + +A + QEML+
Sbjct: 224 MCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLE 283
Query: 285 -IGIRPPGQLFSNLKQALRDEG 305
I P ++ L A EG
Sbjct: 284 RKKISPDVVTYNALINAFVKEG 305
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N LI L A+E++++M R PD +Y ++ G +Q L
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M F P+VV++ +IN +C A R D+ +ELF EM + + TLI+G
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
++ AL F + G P+ T ++ + A M+++++
Sbjct: 592 FRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 90/200 (45%), Gaps = 5/200 (2%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L +G K L +A+ FG + P + ++G R++ + +M
Sbjct: 49 LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N ++ I++ + A S F +++ K G PTV T+ ++ C ++ A
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKIT-KLGFHPTVVTFSTLLHGLCVEDRISEA 167
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ +M P + ++TL+N LC E ++ +A ML+ G++P + +
Sbjct: 168 LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDG 223
Query: 301 LRDEGMEETAVVLAQKIDKL 320
+ G +A+ L +K++++
Sbjct: 224 MCKMGDTVSALNLLRKMEEV 243
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 156/342 (45%), Gaps = 42/342 (12%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + + +++ +LCKS + A E+ ++M + P + ++ L+ G ++KNL
Sbjct: 112 GLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMA 171
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + ++M G + DVV+Y +++ C A R EA +L M+A+ C P + + + G
Sbjct: 172 DSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYG 231
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC-GIGP 183
L ++ +A Q Q + +P TYN ++ C S +I+ A MM++M G G
Sbjct: 232 LCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N Y V+ L K GRT+EA SV + M+R G P V TY +V C +++ A+
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMAR-AGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350
Query: 244 WDEMKARGVLP-------VMH---------------------------------MYSTLI 263
EM G P ++H Y+ LI
Sbjct: 351 VREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALI 410
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC ++DDA K+FQ M G P G +S + + L G
Sbjct: 411 GGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 142/293 (48%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ ++ L+ CK+ VE ++E+ ++ R PD YT ++ + L E+
Sbjct: 81 DMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELL 140
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
EM G P ++++ +I+ C K + A L ++M A+ K + TL++GL
Sbjct: 141 EEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKA 200
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
RL EA Q + K G P+ Y++ V C S ++ DA++++++MR PN TY
Sbjct: 201 GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTY 260
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ +L L K+G+ + A + ++M+ G V Y VV C + A + + M
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
G P + YS+L+N LC K+++A + +EM G +P + +L L
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 152/309 (49%), Gaps = 4/309 (1%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR--RFDPDIKSYTILLEGWGQQKNLLS 63
++ + +N L++ LCK A+E+ M R R PD+ +Y+ LL G+ + +
Sbjct: 41 IQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEE 100
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E+ +E+ G PD + Y ++ + C + R EA+EL EM C P+ F TLI+
Sbjct: 101 SRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLIS 160
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G EK L A + G + + TYN ++ C + R+ +A ++++ M+ G P
Sbjct: 161 GCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP 220
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ Y ++ L K+G+ +A+ V ++M R +P V TY ++ C + ++D A+ +
Sbjct: 221 DVVAYSSFVYGLCKSGKVLDAHQVLEQM-RDSHHDPNVVTYNTILDGLCKSGKIDTALEM 279
Query: 244 WDEMKAR-GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++M + G + YST+++ LC + +A + M G RP +S+L L
Sbjct: 280 MEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLC 339
Query: 303 DEGMEETAV 311
G E AV
Sbjct: 340 KAGKIEEAV 348
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 137/284 (48%), Gaps = 3/284 (1%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M + P+ ++ L+ G+ +Q + M +P+VVSY ++ C +R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 96 YDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
+ EA EL R+M + + +P + + TL++G ++ E+ + + RG P+A Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
VV + C S R+ +A +++EM + G P T++ ++ + E A S+ ++M+
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA- 179
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
G + V TY ++ C ++ A ++ + MKA G P + YS+ + LC K+
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
DA + ++M D P ++ + L G +TA+ + +++
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ ++D LCK + A+ V + M + PD+ +Y+ L+ G + +
Sbjct: 288 GCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEA 347
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-----CKPSPHIFC 119
E REM +G +P+ V+Y +++ CS R EA + EM + C PS +
Sbjct: 348 VEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYN 407
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
LI GL R+ +AL+FF + + +G +P+ +Y+ +V S R A ++ E+R
Sbjct: 408 ALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 147/312 (47%), Gaps = 36/312 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI LCK + RA ++ ++M K PD +Y L++G Q + E+ EM+
Sbjct: 388 YDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMR 447
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS------------------ 114
+ G P+ +YGIMIN C EA L EM + KP+
Sbjct: 448 NSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHIS 507
Query: 115 ---------------PHIFC--TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
P +FC +LI GL + R+ EA +++ Q +KRG P+ TY+ ++
Sbjct: 508 LACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLI 567
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + + A +++ +M G+ PN TY +L K+ E+ S+ + M G
Sbjct: 568 HGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM-LGSGD 626
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P Y IV+R + +++A + E++ G++P +H+YS+LI+ LC ++ A
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686
Query: 278 YFQEMLDIGIRP 289
EM G+ P
Sbjct: 687 LLDEMAKEGLEP 698
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 146/310 (47%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ ++ ++ ++ CK+R + A++VF++M++R + +Y +++ G +
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM D G PD +YG ++N C R EA L EM + KP+ ++ T
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G E + +EA + G +P Y+ ++ C ++ A ++++EM K G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T TY ++ + + A+ + M R G P TY I++ C N + A
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEM-RNSGILPNAYTYGIMINGLCQNGESKEA 474
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +EM + G+ P MY+ LI E + AC+ + M + P +++L +
Sbjct: 475 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKG 534
Query: 301 LRDEGMEETA 310
L G E A
Sbjct: 535 LSTVGRIEEA 544
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 2/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL + ++ LI CK+R++E+A ++ +M P+ +YT LLEG+ + +
Sbjct: 551 VQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSND 610
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ + + M G +PD YGI+I ++ + A + E+E P HI+ +
Sbjct: 611 HEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS 670
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + +A+ + K G EP YNA++ +C S I+ A + D + G
Sbjct: 671 LISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG 730
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ K G +A+ ++K M + G P Y ++ A ++ A
Sbjct: 731 LLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDR-GIAPDAFVYNVLATGCSDAADLEQA 789
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ + +EM RG V ++STL+ C +L + K M+D I P Q N+
Sbjct: 790 LFLTEEMFNRGYAHV-SLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENV 845
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 143/344 (41%), Gaps = 36/344 (10%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+DT K+ V A +V M P + LL+ + + + ++ M+ G
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PDV +Y + AHC A+ +D A ++F EM +C + + +I+GL + EA
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F + G P+A TY A++ C R+ +A ++DEM G+ PN Y ++
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV------------------ 237
+K G+ EA+ + M G +P Y+ ++R C Q+
Sbjct: 361 MKEGKAAEAFDILNEMI-SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419
Query: 238 -----------------DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
D A + +EM+ G+LP + Y +IN LC + +A +
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM+ G++P +++ L EG A + + K P
Sbjct: 480 EMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLP 523
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 148/314 (47%), Gaps = 6/314 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N LI L +E A+E + +++KR PD +Y+ L+ G+ + +NL ++
Sbjct: 522 LPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQ 581
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ ++M + G +P+ +Y ++ + + +++ + + M + KP HI+ +I L
Sbjct: 582 LLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLS 641
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ + A + +K G P+ Y++++ C + A ++DEM K G+ P
Sbjct: 642 RSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIV 701
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y+ ++ ++G A +VF + K G P TY ++ C N + A ++ +
Sbjct: 702 CYNALIDGFCRSGDISRARNVFDSILAK-GLLPNCVTYTALIDGNCKNGDITDAFDLYKD 760
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG- 305
M RG+ P +Y+ L L+ A +EM + G LFS L + G
Sbjct: 761 MLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHV-SLFSTLVRGFCKRGR 819
Query: 306 MEETAVVLAQKIDK 319
++ET +L +D+
Sbjct: 820 LQETEKLLHVMMDR 833
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 144/359 (40%), Gaps = 46/359 (12%)
Query: 2 DKFGLKQELPDFN---------RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ FG K+E+ D+ L++ LCK ++ A+ + D+M P++ Y L+
Sbjct: 298 EAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLV 357
Query: 53 EGW-------------------GQQKNLLSMNEVYR----------------EMKDDGFE 77
+G+ G Q N + + + R EM G
Sbjct: 358 DGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHR 417
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
PD +Y ++ H D A EL EM + P+ + + +INGL EA
Sbjct: 418 PDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNL 477
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ G +P A Y ++ + I+ A ++ M K + P+ Y+ ++ L
Sbjct: 478 LEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLST 537
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
GR EEA + ++ ++ G P TY ++ +C ++ A ++ +M G+ P
Sbjct: 538 VGRIEEAEEYYAQVQKR-GLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNAD 596
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQ 315
Y+ L+ + + Q ML G +P ++ + + L R E ME +VL +
Sbjct: 597 TYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K GL +L ++ LI LCK +E+A + D+M K +P I Y L++G+ + +
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ + G P+ V+Y +I+ +C +A +L+++M P ++
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNV 775
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L G L +AL + RG+ ++ +V +C R+ + +++ M
Sbjct: 776 LATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDRE 834
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
I PN +T + V+ KAG+ EA+ VF + +K ++ + + ++
Sbjct: 835 IVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLL 881
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 144/283 (50%), Gaps = 1/283 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + ++N L+ LC++ +A + +M++ PD+ SY ++ G+ + K
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM+ G +V++GI+I+A C A + DEA+ L +EM+ + ++ +
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G L F + +RG P A TYN ++ +C R+ +A + + M + G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ L G+T+EA + M +K EP V TY I++ C ++ V A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD-EEPNVVTYNIIINKLCKDSLVADA 371
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+ I + MK R P Y++L+ LC + LD+A K ML
Sbjct: 372 LEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLML 414
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 136/273 (49%), Gaps = 3/273 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ +L + LI C ++R + +FD++ +R P +Y L+ G+ + L
Sbjct: 242 GLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEA 301
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+E++ M + G P+V +Y +I+ C + EA++L M + +P+ + +IN
Sbjct: 302 SEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINK 361
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--IG 182
L + +++AL+ KKR P+ TYN+++G C +++A +++ M K
Sbjct: 362 LCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ +++ ++H L K R +A ++ + K G V+T I++ + V+ AM
Sbjct: 422 PDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTT-NILLNSTLKSGDVNKAME 480
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+W ++ ++P Y+T+I+ C L+ A
Sbjct: 481 LWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVA 513
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 6/292 (2%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K E P+ +N +I+ LCK V A E+ + MKKRR PD +Y LL G + +L
Sbjct: 346 KDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDE 405
Query: 64 MNEV-YREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+++ Y +KD + +PDV+S+ +I+ C R +A++++ + L
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNIL 465
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+N +++A++ + Q P + TY ++ +C + +N A ++ +MR +
Sbjct: 466 LNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSEL 525
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ Y+ +L L K G ++A+ +F+ M R + P V ++ I++ + A
Sbjct: 526 PPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDD-SFPDVISFNIMIDGSLKAGDIKSAE 584
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+ M G+ P + YS LIN LD+A +F +M+D G P +
Sbjct: 585 SLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHI 636
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 142/311 (45%), Gaps = 1/311 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ TL +SR+ E A + KM + + S + LLE + Q + + V M
Sbjct: 76 NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GF +V +Y I++ C + +AV L REM + P + T+I G K L +
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
ALQ + + G T+ ++ A+C + ++++A ++ EM+ G+ + Y ++
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
G + ++F + + G P TY ++R FC ++ A I++ M RGV
Sbjct: 256 GFCDCGELDRGKALFDEVLER-GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVR 314
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P ++ Y+ LI+ LC K +A + ML P ++ + L + + A+ +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI 374
Query: 314 AQKIDKLRKTP 324
+ + K R P
Sbjct: 375 VELMKKRRTRP 385
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 134/279 (48%), Gaps = 6/279 (2%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLSMN 65
PD +N L+ LC ++ A ++ M K DPD+ S+ L+ G + L
Sbjct: 385 PDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQAL 444
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++Y + + D+V+ I++N+ + ++A+EL++++ + P+ + T+I+G
Sbjct: 445 DIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGF 504
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
L+ A + + P YN ++ + C ++ A+R+ +EM++ P+
Sbjct: 505 CKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDV 564
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
+++I++ +KAG + A S+ MS G P + TY ++ F +D A+ +D
Sbjct: 565 ISFNIMIDGSLKAGDIKSAESLLVGMSH-AGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+M G P H+ +++ + + D ++ ++++D
Sbjct: 624 KMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVD 662
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 148/286 (51%), Gaps = 1/286 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N ++ LCK + + A ++F++M +R PD + TIL++G + NL +
Sbjct: 430 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNA 489
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++++MK+ + DVV+Y +++ D A E++ +M + P+P F L+N
Sbjct: 490 MELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNA 549
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L S+ LSEA + + + + +P N+++ YC S +D +++M G P+
Sbjct: 550 LCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPD 609
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP-GTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+Y+ +++ +K +A+ + K+M K G P V TY ++ FC Q+ A +
Sbjct: 610 CISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAV 669
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M RGV P Y++LIN +D L +A ++ EML G P
Sbjct: 670 LRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 141/285 (49%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N +I+ LCK ERA+EVF +M + PD +Y LL ++ + +
Sbjct: 290 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVET 349
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M+ PD+V + M++ + D+A+ F ++ P I+ LI G
Sbjct: 350 ENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 409
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +SEA+ + ++G + TYN ++ C + +A ++ +EM + G+ P+
Sbjct: 410 YCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD 469
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ T I++ K G + A +FK+M K + V TY ++ F +D A IW
Sbjct: 470 SYTLTILIDGHCKLGNLQNAMELFKKMKEKR-IKLDVVTYNTLLDGFGKVGDIDTAKEIW 528
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M ++ +LP +S L+N+LC + L +A + + EM+ I+P
Sbjct: 529 ADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 131/256 (51%), Gaps = 3/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK +++ A E+F KMK++R D+ +Y LL+G+G+ +
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E++ +M P +S+ I++NA CS EA ++ EM + + KP+ I +
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RK 178
+I G S+ F + GF P+ +YN ++ + ++ A+ ++ +M ++
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQ 640
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P+ TY+ +LH + + +EA +V ++M + G P STY ++ F +
Sbjct: 641 GGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIER-GVNPDRSTYTSLINGFVSQDNLT 699
Query: 239 MAMRIWDEMKARGVLP 254
A R DEM RG P
Sbjct: 700 EAFRFHDEMLQRGFSP 715
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 142/319 (44%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + L+ CK + +F M+ R PD+ ++ ++ + + N
Sbjct: 321 MLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGN 380
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +K+ G PD V Y I+I +C EA+ L EM C + T
Sbjct: 381 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNT 440
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL K L EA + F + +RG P++ T ++ +C + +A + +M++
Sbjct: 441 ILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKR 500
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + TY+ +L K G + A ++ M K PT ++ I+V C + A
Sbjct: 501 IKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE-ILPTPISFSILVNALCSKGHLSEA 559
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+WDEM ++ + P + + +++I C D + ++M+ G P ++ L
Sbjct: 560 FRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYG 619
Query: 301 LRDEGMEETAVVLAQKIDK 319
E A L +K+++
Sbjct: 620 FVKEENMSKAFGLVKKMEE 638
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 143/308 (46%), Gaps = 1/308 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N LI +L + VE A ++ ++ + ++ + I++ + + + E+++
Sbjct: 194 NALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQE 253
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G PD+V+Y +I+A+ S +EA EL M + P + + T+INGL +
Sbjct: 254 KGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYER 313
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + F + + G P++ TY +++ C + + +MR + P+ + ++
Sbjct: 314 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMS 373
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
++G ++A F + ++ G P Y I+++ +C + AM + +EM +G
Sbjct: 374 LFTRSGNLDKALMYFNSV-KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCA 432
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ Y+T+++ LC L +A K F EM + G+ P + L G + A+ L
Sbjct: 433 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMEL 492
Query: 314 AQKIDKLR 321
+K+ + R
Sbjct: 493 FKKMKEKR 500
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 123/266 (46%), Gaps = 1/266 (0%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
+ +L+ + Q + L E + ++ G+ + + +I + + A +++E+
Sbjct: 158 FDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEIS 217
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
+ + + ++N L + ++ + F + +++G P+ TYN ++ AY +
Sbjct: 218 RSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLME 277
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
+A+ +M M G P TY+ V++ L K G+ E A VF M R G P +TY +
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSL 336
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ C I+ +M++R V+P + +S++++ LD A YF + + G+
Sbjct: 337 LMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 396
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVL 313
P +++ L Q +GM A+ L
Sbjct: 397 IPDNVIYTILIQGYCRKGMISEAMNL 422
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 100 VELFREMEAT--NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
VE+ + +T NC + +F LI ++L EA + F + +G+ NA++
Sbjct: 138 VEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALI 197
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
G+ + A+R+ E+ + G+G N T +I+++ L K G+ E+ + + K G
Sbjct: 198 GSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEK-GV 256
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P + TY ++ + ++ A + M ++G P ++ Y+T+IN LC K + A +
Sbjct: 257 YPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKE 316
Query: 278 YFQEMLDIGIRPPGQLFSNL 297
F EML G+ P + +L
Sbjct: 317 VFAEMLRSGLSPDSTTYRSL 336
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 7 KQELP---DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K+ LP F+ L++ LC H+ A V+D+M + P + +++G+ + N S
Sbjct: 534 KEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNA-S 592
Query: 64 MNEVYRE-MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC--T 120
E++ E M +GF PD +SY +I + +A L ++ME P +F +
Sbjct: 593 DGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNS 652
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++G E ++ EA + +RG P+ TY +++ + + +A+R DEM + G
Sbjct: 653 ILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRG 712
Query: 181 IGPNTR 186
P+ +
Sbjct: 713 FSPDDK 718
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ +N ++ C+ ++ A+ V KM +R +PD +YT L+ G+ Q NL
Sbjct: 642 GLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701
Query: 65 NEVYREMKDDGFEPD 79
+ EM GF PD
Sbjct: 702 FRFHDEMLQRGFSPD 716
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 1/264 (0%)
Query: 50 ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
I+L+G + + + REM PD+VSY +IN C AK+ EAV L EMEA
Sbjct: 3 IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
C P+ TL++GL + R+ EA++ KK+GF+ + Y ++ +C + ++
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ DEM GI N TY ++H L + G+ +EA +V M+ G P V TY ++
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEH-GIHPDVVTYTGLID 181
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C + + AM + + M +G P Y+ L++ LC E + DA K + M++ G +
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241
Query: 290 PGQLFSNLKQALRDEGMEETAVVL 313
++ L + L D+G + A+ L
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKL 265
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 138/283 (48%), Gaps = 1/283 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+D LCK ++ A E+ + MKK+ FD D+ Y L+ G+ NL E++ EM G
Sbjct: 74 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 133
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+VV+Y +++ C ++ EA + M P + LI+GL + R + A+
Sbjct: 134 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 193
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
++G EP TYN ++ C + DA++++ M + G + TY+ ++ L
Sbjct: 194 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 253
Query: 196 IKAGRTEEAYSVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
G+ +EA +F M + EP V T+ +++ C ++ A++I +M +G
Sbjct: 254 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 313
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ Y+ L+ K+ +A + ++++LD+G P +S L
Sbjct: 314 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSIL 356
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 170/383 (44%), Gaps = 54/383 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G ++ + LI C + +++R +E+FD+M + ++ +Y+ L+ G +
Sbjct: 94 MKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 153
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-----EATN----- 110
N V M + G PDVV+Y +I+ C R A++L M E +N
Sbjct: 154 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 213
Query: 111 -----CKPSPHI--------------------FCTLINGLGSEKRLSEALQFFGQ--SKK 143
CK I + TL+ GL + ++ EAL+ F +
Sbjct: 214 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
EP T+N ++G C R+ A ++ +M K G N TY+++L +KAG+ +E
Sbjct: 274 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKE 333
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++K++ G P TY I++ FC +++A ++ EM+ G+ P + Y+TL+
Sbjct: 334 AMELWKQV-LDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLM 392
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRP--------------PG--QLFSNLKQALRDEGME 307
SLC E L+ A FQEM + P G Q L+ + + G+
Sbjct: 393 ASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR 452
Query: 308 ETAVVLAQKIDKLRKTPLVDRGQ 330
A+ + I++L K +D +
Sbjct: 453 PDALTFSTLINRLSKLGELDEAK 475
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 3 KFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
+ G K PD +N LI+ LCK++ ++ A + +M+ P+ + T L++G +
Sbjct: 23 EMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDG 82
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ E+ MK GF+ DVV YG +I+ C+ D ELF EM + +
Sbjct: 83 RMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYS 142
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L++GL + EA + G P+ TY ++ C R A +++ M +
Sbjct: 143 CLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEK 202
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ TY+++L L K G +A+ + + M K G + V TY +++ C +VD
Sbjct: 203 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEK-GKKADVVTYNTLMKGLCDKGKVDE 261
Query: 240 AMRIWDEM--KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
A+++++ M + P + ++ LI LC E +L A K ++M+ G
Sbjct: 262 ALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKG 310
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 119/257 (46%), Gaps = 1/257 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LCK + +A ++ KM K+ ++ +Y +LL G + + E+++++
Sbjct: 283 FNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVL 342
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D GF P+ +Y I+I+ C + + A LF EM P+ + TL+ L E L
Sbjct: 343 DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 402
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F + EP+ ++N ++ + + +M + G+ P+ T+ ++
Sbjct: 403 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 462
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K G +EA S +RM G P Y+ +++ + + +M A+G
Sbjct: 463 NRLSKLGELDEAKSALERMV-ASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 521
Query: 253 LPVMHMYSTLINSLCHE 269
+ + ST++ LCH
Sbjct: 522 VLDRKIVSTILTCLCHS 538
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 131/303 (43%), Gaps = 38/303 (12%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM--KKRRFDPDIKSYTILLEGWGQQKNLL 62
G K ++ +N L+ LC V+ A ++F+ M + +P++ ++ +L+ G ++ L
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+++R+M G ++V+Y +++ A + EA+EL++
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWK------------------ 339
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
Q GF P + TY+ ++ +C +N A + EMR G+
Sbjct: 340 -----------------QVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN 382
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P Y+ ++ L K G E+A S+F+ M EP + ++ ++
Sbjct: 383 PALFDYNTLMASLCKEGSLEQAKSLFQEMGN-ANCEPDIISFNTMIDGTLKAGDFQFVKE 441
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ +M G+ P +STLIN L +LD+A + M+ G P ++ +L + L
Sbjct: 442 LQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLS 501
Query: 303 DEG 305
+G
Sbjct: 502 SKG 504
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 112/238 (47%), Gaps = 5/238 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G L +N L+ K+ ++ A E++ ++ F P+ +Y+IL++G+ + +
Sbjct: 306 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 365
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM+ G P + Y ++ + C ++A LF+EM NC+P F T
Sbjct: 366 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 425
Query: 121 LINGL--GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+G + + + LQ + + G P+A T++ ++ +++A ++ M
Sbjct: 426 MIDGTLKAGDFQFVKELQM--KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 483
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G P+ YD +L L G T E ++ +M+ K GT ++ C++ Q
Sbjct: 484 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK-GTVLDRKIVSTILTCLCHSIQ 540
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL L D+N L+ +LCK +E+A+ +F +M +PDI S+ +++G + +
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M + G PD +++ +IN DEA M A+ P ++ +
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
L+ GL S+ +E + Q +G + + ++ C S++ D ++
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 158/311 (50%), Gaps = 14/311 (4%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+F + +F L+ LC+ ++V+ A+++ K F + KS+ I+L GW NL+
Sbjct: 155 RFKFDMGIEEFQSLLSALCRYKNVQDAEQLM-YCNKAVFPLNTKSFNIVLNGWC---NLI 210
Query: 63 SM----NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
V+REM G DVVSY M++ + A + L+++M+ +P ++
Sbjct: 211 GSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVY 270
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+ L + ++EA +++G P TYN+++ C + ++ +A D+M K
Sbjct: 271 NAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLK 330
Query: 179 CGIGPNTRTYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
I P RTY H ++ RT EE +++ ++M RK G +P TY +++R FC Q+
Sbjct: 331 RCISPTIRTY----HAFLRILRTGEEVFALLEKM-RKMGCQPINDTYIMLIRKFCRWRQL 385
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ ++WDEM G+ P Y LI+ L +LD A KY+ EM + + P ++ L
Sbjct: 386 ENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQLLPEPKIDEML 445
Query: 298 KQALRDEGMEE 308
+ L ++ + E
Sbjct: 446 QTWLSNKQIAE 456
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 102/214 (47%), Gaps = 3/214 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ ++ + ++ K+ + R ++ +MKK +PD K Y ++ + +
Sbjct: 223 MSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRL 282
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + M++ G P++V+Y +I C A++ +EA F +M P+ +
Sbjct: 283 VNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHA 342
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ L + + E + +K G +P TY ++ +C ++ + +++ DEM + G
Sbjct: 343 FLRILRTGE---EVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENG 399
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
I P+ +Y +++H L G + A+ + M K
Sbjct: 400 ISPDRSSYIVLIHGLFLNGELDAAHKYYTEMKEK 433
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 90/236 (38%), Gaps = 45/236 (19%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS---PHIFCTLINGLGSE 128
+ G+ V Y MI+ +++D A L EM S P +I +
Sbjct: 81 RQPGYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTGVSLVTPQTLLIMIRKYCAV 140
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ A+ F K+ F+ + +++ A C + DA ++M K NT+++
Sbjct: 141 HDVGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLM-YCNKAVFPLNTKSF 199
Query: 189 DIVLH---HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
+IVL+ +LI + R E R+W
Sbjct: 200 NIVLNGWCNLIGSPRESE--------------------------------------RVWR 221
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM RG+ + Y+++++ L + +++M IGI P ++++ + AL
Sbjct: 222 EMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHAL 277
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + LI C+ R +E +++D+M + PD SY +L+ G
Sbjct: 360 MRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGE 419
Query: 61 LLSMNEVYREMKDDGFEPD 79
L + ++ Y EMK+ P+
Sbjct: 420 LDAAHKYYTEMKEKQLLPE 438
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 143/277 (51%), Gaps = 1/277 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
++F++M++R +P++ +YT++++ +++ L + EM + G P VV+Y +I
Sbjct: 338 GMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIR 397
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
+C R + A+E+ ME+ NC+P+ + LI G K + +A+ + + P
Sbjct: 398 GYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTP 457
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TYN+++ C + + AY+++D +++ G+ P+ TY + + L K+ R EEA +F
Sbjct: 458 SLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLF 517
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+ K G + Y ++ C ++D A+ + + M + LP Y++LI +C
Sbjct: 518 NSLKEK-GIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCK 576
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
E K+ + + M +G++P ++ L + + EG
Sbjct: 577 EGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREG 613
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 155/313 (49%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI C++ V A +VF+ M + + SYT ++ G + +
Sbjct: 244 GLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEG 303
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++M++D P V +Y ++I+A R E ++LF EM +C+P+ H + +++
Sbjct: 304 ISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDA 363
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ E++L E+ + + ++G P TYNA++ YC RI A ++ M PN
Sbjct: 364 MCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPN 423
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
RTY+ ++ K +A ++ +M T P++ TY ++ + C D A ++
Sbjct: 424 ERTYNELICGFSKRKHVHKAMTLLSKMLESKLT-PSLVTYNSLIHVQCKAGHFDSAYKLL 482
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D +K G++P YS I++LC ++++AC F + + GI+ +++ L
Sbjct: 483 DLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKA 542
Query: 305 GMEETAVVLAQKI 317
G + A+ L +++
Sbjct: 543 GKIDEAISLLERM 555
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 155/315 (49%), Gaps = 2/315 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N LI C+ +E A E+ M+ P+ ++Y L+ G+ ++K++
Sbjct: 384 GLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKA 443
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M + P +V+Y +I+ C A +D A +L ++ P + I+
Sbjct: 444 MTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L KR+ EA F K++G + Y A++ +C + +I++A +++ M PN
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY+ +++ + K G+ +E S+ + MS K G +PTV+TY I++ D A R++
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMS-KMGVKPTVATYTILIEEMLREGDFDHANRVF 622
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++M + G P ++ Y+ I++ C + +A M++ G+ P ++ L A
Sbjct: 623 NQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERL 682
Query: 305 GMEETAV-VLAQKID 318
G+ A VL + +D
Sbjct: 683 GLAYDAFNVLKRMLD 697
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 136/285 (47%), Gaps = 1/285 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI K +HV +A + KM + + P + +Y L+ + + S ++ +K
Sbjct: 427 YNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLK 486
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G PD +Y + I+ C +KR +EA +LF ++ K + ++ LI+G ++
Sbjct: 487 ENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKID 546
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ + P + TYN+++ C ++ + M++ M K G+ P TY I++
Sbjct: 547 EAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILI 606
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+++ G + A VF +M G +P V TY + +C + V A + M GV
Sbjct: 607 EEMLREGDFDHANRVFNQMVSF-GHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGV 665
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+P Y+ LI++ DA + MLD G P +++NL
Sbjct: 666 MPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNL 710
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 163/342 (47%), Gaps = 40/342 (11%)
Query: 8 QELPDFNRLIDTLCKSRHVER------------AQEVFDKMK--KRRFDPDIKSYTILLE 53
Q P F +LI L S HV A + F+ + K F +KS++ LL+
Sbjct: 70 QRHPSFQKLIPNLSPS-HVSSLFNNHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFLLK 128
Query: 54 --------GWGQQ------KNLLSMNEV------YREM-KDDG---FEPDVVSYGIMINA 89
G G++ K +S++++ R+M +DD F+ V SY ++
Sbjct: 129 ILIPNNLFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMM 188
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
DE ++ EM P+ + T++N + EA + + + G P+
Sbjct: 189 LARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPD 248
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+ TY +++ YC + +N AY++ + M G N +Y ++H L +AGR +E S+FK
Sbjct: 249 SFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFK 308
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+M R+ PTV TY +++ N + M +++EM+ R P +H Y+ +++++C E
Sbjct: 309 KM-REDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKE 367
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
KLD++ + EM++ G+ P ++ L + +EG E A+
Sbjct: 368 RKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAAL 409
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 1/285 (0%)
Query: 40 RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
+F ++SY LL + + M VY EM +D P++ + M+NA+ EA
Sbjct: 174 KFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEA 233
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
++ P + +LI G ++ A + F +G +Y ++
Sbjct: 234 NLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHG 293
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
C + RI++ + +MR+ P RTY +++H L R E +F M R+ EP
Sbjct: 294 LCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEM-RERSCEP 352
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY ++V C ++D + RI +EM +G++P + Y+ LI C E +++ A +
Sbjct: 353 NVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL 412
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
M RP + ++ L A+ L K+ + + TP
Sbjct: 413 GLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTP 457
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L L +N LI CK+ H + A ++ D +K+ PD +Y++ ++ + K +
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEAC 514
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+++ +K+ G + + V Y +I+ HC A + DEA+ L M + +C P+ + +LI G+
Sbjct: 515 DLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGV 574
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
E ++ E L K G +P TY ++ + A R+ ++M G P+
Sbjct: 575 CKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDV 634
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY +H +G +EA + RM + G P TY +++ + A +
Sbjct: 635 YTYTAFIHTYCTSGNVKEAEGMMARMI-EAGVMPDSLTYTLLISAYERLGLAYDAFNVLK 693
Query: 246 EMKARGVLPVMHMYSTLI 263
M G P +++ LI
Sbjct: 694 RMLDAGCDPSHPIWNNLI 711
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 142/321 (44%), Gaps = 4/321 (1%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
K + +N L+ L + ++ + V+ +M P+I + ++ + + N++ N
Sbjct: 175 FKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEAN 234
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++ G PD +Y +I +C + A ++F M C+ + + T+I+GL
Sbjct: 235 LYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGL 294
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+ E + F + ++ P TY ++ A + R + + +EMR+ PN
Sbjct: 295 CEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNV 354
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY +++ + K + +E+ + M K G P+V TY ++R +C +++ A+ I
Sbjct: 355 HTYTVMVDAMCKERKLDESRRILNEMMEK-GLVPSVVTYNALIRGYCEEGRIEAALEILG 413
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M++ P Y+ LI + A +ML+ + P +++L G
Sbjct: 414 LMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAG 473
Query: 306 MEETAVVLAQKIDKLRKTPLV 326
++A L +D L++ LV
Sbjct: 474 HFDSAYKL---LDLLKENGLV 491
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+K + + LI+ + + + A VF++M PD+ +YT + + N
Sbjct: 590 MSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGN 649
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M + G PD ++Y ++I+A+ +A + + M C PS I+
Sbjct: 650 VKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNN 709
Query: 121 LI 122
LI
Sbjct: 710 LI 711
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 1/301 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ +LC+++ E A+ VF M + P++ SY+IL+ G + + + E+ EM
Sbjct: 55 YGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G +P+VV+YG +++ C + EAV+LF M C P ++ LI+G + +
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + ++G P TYN+++ + + +M + G PN T++ +L
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G EA+ +F M R G P V +Y ++R C + A R+ EM GV
Sbjct: 235 DGFCKMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGV 293
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ LI+ LD A K F E+ G+ P +S + L G A V
Sbjct: 294 GPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFV 353
Query: 313 L 313
+
Sbjct: 354 V 354
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 147/313 (46%), Gaps = 1/313 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N L++ L KS + ++ M P+ +Y LL Q + V+R M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G P+V SY I+I C ++ DEA EL EM +P+ + +L++GL +L
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA+ F + RG P+ YN ++ + + +AYR+ +EM + G P TY+ +
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L + G S+FK M R+ G P + T+ ++ FC + A R++ EM++ G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQ-GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+TL+ +C + K +A + +EM+ G+ P ++ L G + A+
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317
Query: 312 VLAQKIDKLRKTP 324
L +I K P
Sbjct: 318 KLFYEIPKSGLEP 330
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 139/285 (48%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + L+ LCK ++ A ++F +M R PD Y +L++G+ ++ ++
Sbjct: 117 GHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEA 176
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM + G P V +Y +++ + LF++M C P+ F L++G
Sbjct: 177 YRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EA + F + + G P+ +YN ++ C + ++A R++ EM + G+GP+
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+I++ K+G + A +F + K G EP +Y ++ C +V A ++
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIP-KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVF 355
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M A G P + L+ LC ++L ++C+ FQ M+ P
Sbjct: 356 KDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVP 400
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 150/323 (46%), Gaps = 3/323 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ LI LC+ + V+ A E+ ++M P++ +Y LL G + L
Sbjct: 82 GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEA 141
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M G PD V Y ++I+ EA LF EM C P+ + +L++G
Sbjct: 142 VDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSG 201
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ F ++G P T+N ++ +C + +A+R+ EMR G P+
Sbjct: 202 FSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPD 261
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ ++ + G+ EA + + M R G P + +Y I++ + + +D A++++
Sbjct: 262 VVSYNTLMRGMCSKGKPHEAQRLLREMIRS-GVGPDIVSYNILIDGYSKSGALDHAIKLF 320
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RD 303
E+ G+ P YST+I+ LC K+ A F++M+ G P + L L R
Sbjct: 321 YEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRG 380
Query: 304 EGMEETAVVLAQKIDKLRKTPLV 326
E + E+ L Q + K PL+
Sbjct: 381 ERLTESC-ELFQAMVKFECVPLI 402
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 144/298 (48%), Gaps = 1/298 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID K + A +F++M ++ P + +Y LL G+ ++ + ++++M
Sbjct: 160 YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDML 219
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P++ ++ +++ C EA LF EM + C P + TL+ G+ S+ +
Sbjct: 220 RQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPH 279
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + + G P+ +YN ++ Y S ++ A ++ E+ K G+ P+ +Y ++
Sbjct: 280 EAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTII 339
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L +AG+ A+ VFK M G+ P + +V C ++ + ++ M
Sbjct: 340 DCLCRAGKVGAAFVVFKDMIAN-GSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFEC 398
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+P++ Y+ L+ LC + DD C+ F E+ + G P ++ + + LR +E A
Sbjct: 399 VPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAA 456
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
+SY ++ + R D + +M C P+ + + L+ L +R EA F
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
+G P +Y+ ++ C ++++A +++EM G PN TY +L L K G+
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
+EA +F RM + G P Y +++ F + A R+++EM +G +P + Y+
Sbjct: 138 LKEAVDLFSRMVYR-GCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+L++ + + F++ML G P F+NL
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNL 233
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N L+ +C AQ + +M + PDI SY IL++G+ +
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ E+ G EPD SY +I+ C A + A +F++M A P +
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL +RL+E+ + F K P P YN ++ C + R +D + E+ + G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEA 204
P+ ++L L ++ E A
Sbjct: 433 FSPDVEISKVILETLRRSDDKEAA 456
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 160/324 (49%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G+ + + LI +E AQ +F++M+++ + D+ YT ++ + N
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 349
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM D G P +YG +I+ C A + + A L EM+ +P IF T
Sbjct: 350 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 409
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + EAL+ +K+G E + YN++ C R ++A ++ M + G
Sbjct: 410 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 469
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT ++ ++ K G EA VF+ M K G P + TY +++ + + A
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK-GNVPNIITYNVLIDGYSKRGNMKEA 528
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ DE++ RG++P ++ ++LI+ C + K+D A K F EM G+ P ++ +
Sbjct: 529 HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISG 588
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +G E A L ++ + TP
Sbjct: 589 LSKDGRSEEAFKLYDEMKETGLTP 612
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 134/315 (42%), Gaps = 13/315 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + L+D C RA K K++ FD +L + K
Sbjct: 131 GLRVPVTVIASLVDDACNESKCNRA-----KFKEKFFD-------LLFRVYADNKMFGEA 178
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + M+ GF D S + + A + D + FR M + + + + +++G
Sbjct: 179 LEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDG 238
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + + +G + TYNA + Y + + ++ M K G+ N
Sbjct: 239 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACN 298
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++H G+ EEA +F+ M R+ G E V Y ++ C + V A+ ++
Sbjct: 299 VVTYTLLIHGFSNIGKIEEAQRLFEEM-REKGIEADVYVYTSIISCNCRSGNVKRALVLF 357
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM +G++P H Y LI+ +C +++ A EM GI +F+ L +
Sbjct: 358 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCES 417
Query: 305 GMEETAVVLAQKIDK 319
GM + A+ L ++K
Sbjct: 418 GMVDEALRLQVVMEK 432
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 129/281 (45%), Gaps = 1/281 (0%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
V+ F +M + + S TI+L+G ++ ++ ++ E+ G + +VV+Y
Sbjct: 209 QVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYN 268
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
I + E+ ME + + LI+G + ++ EA + F + +++
Sbjct: 269 AFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 328
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G E + Y +++ C S + A + DEM G+ P+ TY ++H + KAG+ E A
Sbjct: 329 GIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAA 388
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+ M K G + + ++ +C + VD A+R+ M+ +G+ + Y+++ +
Sbjct: 389 QMLVNEMQGK-GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIAS 447
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC ++ D+A M++ G+ P F+ L EG
Sbjct: 448 GLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEG 488
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 104/198 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL+ ++ +N + LCK + A+ + M +R P+ S+T L++ + ++ N
Sbjct: 430 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 489
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+REM++ G P++++Y ++I+ + EA +L E+E P + +
Sbjct: 490 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 549
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + ++ AL+ F + +RG P TY A++ R +A+++ DEM++ G
Sbjct: 550 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETG 609
Query: 181 IGPNTRTYDIVLHHLIKA 198
+ P+ Y ++ L A
Sbjct: 610 LTPDDTVYSSLVGSLHSA 627
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 150/301 (49%), Gaps = 1/301 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LC + A+ +F M+ P++ +Y +++G+ + ++ E+Y EM
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML 290
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG P+VV++GI+I+ C A + +M + P+ ++ LI+G LS
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL + +K P+ TY+ ++ C R+ +A ++ EM+K G PN TY+ ++
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G E+A V +M+ K G EP + T+ ++ +C +++ AM ++ EM +G+
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEK-GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
LP + Y+ LI+ + +A + +EM + G+ P S L L +G A+
Sbjct: 470 LPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIK 529
Query: 313 L 313
L
Sbjct: 530 L 530
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 135/279 (48%), Gaps = 1/279 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ L +N ++D CK HV++A E++ +M P++ ++ IL++G +
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDE 313
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++S + +M G P++ Y +I+ +C A EA+ L E+E P +
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL R+ EA + KK+GF P A TYN ++ YC + A + +M + G
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T+ ++ KAG+ E A ++ M K G P V Y ++ + A
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK-GLLPDVVAYTALIDGHFKDGNTKEA 492
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
R+ EM+ G+ P + S LI+ LC + ++ DA K F
Sbjct: 493 FRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 154/334 (46%), Gaps = 17/334 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LID C+ +A +FD+M +++ P + YTIL+ G + +
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEA 247
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++R M++ G P++ +Y M++ +C +A+EL+ EM P+ F LI+G
Sbjct: 248 ESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDG 307
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + A +F G P YN ++ YC + +++A + E+ K I P+
Sbjct: 308 LCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPD 367
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I++ L R EEA + + M +K G P TY ++ +C ++ A+ +
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKK-GFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS--------- 295
+M +G+ P + +STLI+ C K++ A + EM+ G+ P ++
Sbjct: 427 SQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKD 486
Query: 296 -NLKQALR------DEGMEETAVVLAQKIDKLRK 322
N K+A R + G+ L+ ID L K
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCK 520
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 143/298 (47%), Gaps = 14/298 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + F LID LCK+ + A++ M P+I Y L++G+ + NL
Sbjct: 293 GLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEA 352
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ E++ PDV +Y I+I C R +EA L +EM+ P+ + TLI+G
Sbjct: 353 LSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG 412
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + +A++ Q ++G EP T++ ++ YC + ++ A + EM G+ P+
Sbjct: 413 YCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPD 472
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ K G T+EA+ + K M ++ G P V T ++ C + ++ A++++
Sbjct: 473 VVAYTALIDGHFKDGNTKEAFRLHKEM-QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Query: 245 -------------DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+E+ P MY+ LI LC + ++ A K+F +M G+RP
Sbjct: 532 LAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRP 589
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 8/321 (2%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N ++D L K + +V+ M R P++ +Y L++G +Q + L ++ EM +
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
P VV Y I+I C R EA +FR M + P+ + + T+++G + +
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL+ + + G P T+ ++ C + + A + + +M G+ PN Y+ ++
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
KAG EA S+ + + P V TY I+++ C +++ A + EMK +G L
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHE-ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFL 400
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P Y+TLI+ C E ++ A + +M + GI P FS L G E A+ L
Sbjct: 401 PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGL 460
Query: 314 AQKI-------DKLRKTPLVD 327
++ D + T L+D
Sbjct: 461 YTEMVIKGLLPDVVAYTALID 481
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 141/308 (45%), Gaps = 5/308 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F LI + VE A V+ KM P +++ ++L+G ++ +M +VY +M
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+VV+YG +I+ C + +A LF EM P+ I+ LI GL E R+S
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + G P TYN ++ YC + A + EM G+ PN T+ I++
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILI 305
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K A M+ G P + Y ++ +C + A+ + E++ +
Sbjct: 306 DGLCKTDEMVSARKFLIDMA-SFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAV 311
LP + YS LI LC D++++A QEM G P ++ L EG ME+
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 312 VLAQKIDK 319
V +Q +K
Sbjct: 425 VCSQMTEK 432
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 109/219 (49%), Gaps = 13/219 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + F+ LID CK+ +E A ++ +M + PD+ +YT L++G + N
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF-------------REME 107
+++EM++ G P+V + +I+ C R +A++LF E++
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD 548
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
+ C P+ ++ LI GL ++ R+ +A +FF + G P+ T ++ + +M +
Sbjct: 549 RSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLR 608
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
D + ++ K GI PN+ Y ++ ++G + A S
Sbjct: 609 DVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALS 647
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 117/301 (38%), Gaps = 44/301 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVF-------------DKMKKRRFDPDIKS 47
M + GL + + LID LCK + A ++F +++ + P+
Sbjct: 499 MQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVM 558
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
YT L++G + ++ + +M+ G PDV + ++I H A + + L ++
Sbjct: 559 YTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL 618
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
P+ ++ L G L AL F G+ G +P + G+Y ++R
Sbjct: 619 KMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE----GVQPLDRVNSEPWGSY--TIRSR 672
Query: 168 DAYRMMDEMRKC------GIGPNTRTYDIVLHHLIKA------------------GRTEE 203
++ E ++C G ++ H ++K R +
Sbjct: 673 FQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNK 732
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A +F++M + +P + T + + +DM I ++ RG+ + + ++LI
Sbjct: 733 ALQLFRQM-QMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLI 791
Query: 264 N 264
N
Sbjct: 792 N 792
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 142/290 (48%), Gaps = 2/290 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL E+ FN L++ LCK V A + M + + PDI ++ IL+ G+ Q
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ M D+G +PDV +Y ++N C +Y++ +E ++ M C P+ F
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC- 179
L+ L +L +AL + K + P+A T+ ++ +C + ++ AY + +M +
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY 596
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ +T TY+I++H + A +F+ M + P TY ++V FC VD+
Sbjct: 597 MVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC-LGPDGYTYRLMVDGFCKTGNVDL 655
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ EM G +P + +IN LC ED++ +A M+ G+ P
Sbjct: 656 GYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 1/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ +N LI LCK+ + A+ K+ +PD +Y L+ G+ + +
Sbjct: 281 GPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLA 340
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +GF PD +Y +I+ C + A+ LF E KP+ ++ TLI G
Sbjct: 341 ERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ + EA Q + ++G PE T+N +V C ++DA ++ M G P+
Sbjct: 401 LSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I++H + E A + M G +P V TY ++ C ++ + M +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMMDN-GVDPDVYTYNSLLNGLCKTSKYEDVMETY 519
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M +G P + ++ L+ SLC KLD A +EM + + P F L
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 305 GMEETAVVLAQKIDKL 320
G + A L +K++++
Sbjct: 580 GDLDGAYTLFRKMEEV 595
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 152/326 (46%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD + + + +N ++ L S + ++A +V+ +M+ R PD+ S+TI ++ + +
Sbjct: 102 MDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSR 161
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G E +VV+Y ++ DE ELF +M A+ F
Sbjct: 162 PHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNK 221
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + + E + + KRG P TYN + C ++ A RM+ + G
Sbjct: 222 LLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQG 281
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ +++ L K + +EA ++ + G EP TY ++ +C V +A
Sbjct: 282 PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNE-GLEPDSFTYNTLIAGYCKGGMVQLA 340
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
RI G +P Y +LI+ LCHE + + A F E L GI+P L++ L +
Sbjct: 341 ERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L ++G+ A LA ++ + P V
Sbjct: 401 LSNQGLILEAAQLASEMSEKGLIPEV 426
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 150/332 (45%), Gaps = 36/332 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL--- 61
G+ L FN+L+ LCK V+ +++ DK+ KR P++ +Y ++G Q+ L
Sbjct: 211 GVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAA 270
Query: 62 -------------------------LSMNEVYRE-------MKDDGFEPDVVSYGIMINA 89
L N ++E + ++G EPD +Y +I
Sbjct: 271 VRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAG 330
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+C A + P + +LI+GL E + AL F ++ +G +P
Sbjct: 331 YCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
YN ++ I +A ++ EM + G+ P +T++I+++ L K G +A + K
Sbjct: 391 VILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M K G P + T+ I++ + +++ A+ I D M GV P ++ Y++L+N LC
Sbjct: 451 VMISK-GYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKT 509
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
K +D + ++ M++ G P F+ L ++L
Sbjct: 510 SKYEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 140/285 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + +N LI L + A ++ +M ++ P+++++ IL+ G + +
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + + M G+ PD+ ++ I+I+ + + + + A+E+ M P + + +L+NG
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + ++ + ++G P T+N ++ + C +++ A +++EM+ + P+
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++ K G + AY++F++M + TY I++ F V MA +++
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM R + P + Y +++ C +D K+ EM++ G P
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIP 670
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 5/222 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N L++ LCK+ E E + M ++ P++ ++ ILLE + L
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKA 550
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME---ATNCKPSPHIFCTL 121
+ EMK+ PD V++G +I+ C D A LFR+ME +C S + +
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSC--STPTYNII 608
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ + ++ A + F + R P+ TY +V +C + ++ Y+ + EM + G
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGF 668
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
P+ T V++ L R EA + RM +K V+T
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVNT 710
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 160/324 (49%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G+ + + LI +E AQ +F++M+++ + D+ YT ++ + N
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM D G P +YG +I+ C A + + A L EM+ +P IF T
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 405
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + EAL+ +K+G E + YN++ C R ++A ++ M + G
Sbjct: 406 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 465
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT ++ ++ K G EA VF+ M K G P + TY +++ + + A
Sbjct: 466 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK-GNVPNIITYNVLIDGYSKRGNMKEA 524
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ DE++ RG++P ++ ++LI+ C + K+D A K F EM G+ P ++ +
Sbjct: 525 HKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISG 584
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +G E A L ++ + TP
Sbjct: 585 LSKDGRSEEAFKLYDEMKETGLTP 608
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 134/315 (42%), Gaps = 13/315 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + L+D C RA K K++ FD +L + K
Sbjct: 127 GLRVPVTVIASLVDDACNESKCNRA-----KFKEKFFD-------LLFRVYADNKMFGEA 174
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + M+ GF D S + + A + D + FR M + + + + +++G
Sbjct: 175 LEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDG 234
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + + +G + TYNA + Y + + ++ M K G+ N
Sbjct: 235 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACN 294
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++H G+ EEA +F+ M R+ G E V Y ++ C + V A+ ++
Sbjct: 295 VVTYTLLIHGFSNIGKIEEAQRLFEEM-REKGIEADVYVYTSIISCNCRSGNVKRALVLF 353
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM +G++P H Y LI+ +C +++ A EM GI +F+ L +
Sbjct: 354 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCES 413
Query: 305 GMEETAVVLAQKIDK 319
GM + A+ L ++K
Sbjct: 414 GMVDEALRLQVVMEK 428
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 132/290 (45%), Gaps = 36/290 (12%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++D LCK VE +++ D++ + ++ +Y +EG+ ++ +L + E+ M+ +G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+VV+Y + LI+G + ++ EA
Sbjct: 291 VACNVVTYTL-----------------------------------LIHGFSNIGKIEEAQ 315
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + +++G E + Y +++ C S + A + DEM G+ P+ TY ++H +
Sbjct: 316 RLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGV 375
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
KAG+ E A + M K G + + ++ +C + VD A+R+ M+ +G+
Sbjct: 376 CKAGQMEAAQMLVNEMQGK-GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESD 434
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ Y+++ + LC ++ D+A M++ G+ P F+ L EG
Sbjct: 435 VFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEG 484
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 104/198 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL+ ++ +N + LCK + A+ + M +R P+ S+T L++ + ++ N
Sbjct: 426 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 485
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+REM++ G P++++Y ++I+ + EA +L E+E P + +
Sbjct: 486 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 545
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + ++ AL+ F + +RG P TY A++ R +A+++ DEM++ G
Sbjct: 546 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETG 605
Query: 181 IGPNTRTYDIVLHHLIKA 198
+ P+ Y ++ L A
Sbjct: 606 LTPDDTVYSSLVGSLHSA 623
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ LI C V+ A ++FD+M +R P++ +YT ++ G +
Sbjct: 535 GLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEA 594
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAK 94
++Y EMK+ G PD Y ++ + SA+
Sbjct: 595 FKLYDEMKETGLTPDDTVYSSLVGSLHSAE 624
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 142/292 (48%), Gaps = 1/292 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI C ++ A + + M +R + +Y +L+ V EM+
Sbjct: 222 YNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQ 281
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+GF PDV +Y I+IN +C +A+E+F EM + + + +LI + ++
Sbjct: 282 KNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQ 341
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + F + K+G P+ YNA++ ++C + AY +M EM K I P+ TY+ ++
Sbjct: 342 ETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLM 401
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
GR +EA ++ M+++ G +P + +Y ++ + + A+R+ DEM +G
Sbjct: 402 RGFCLLGRLDEARTLIDEMTKR-GIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGF 460
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
P + Y+ LI LC + DDA +EM+ GI P + +L + L E
Sbjct: 461 NPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 145/287 (50%), Gaps = 7/287 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN ++ LC + RA E+ +M + P+ +Y ++ G+ + + + EV REM+
Sbjct: 119 FNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMR 174
Query: 73 D-DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCTLINGLGSEKR 130
+ G PD +Y +I+ C R ++AV++F EM PS ++ LI G +
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGK 234
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L ALQ+ +RG TYN ++ A R +DAY +++EM+K G P+ TY+I
Sbjct: 235 LDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNI 294
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+++ K G ++A VF+ MS+K G T TY ++ +F QV R+++ +
Sbjct: 295 LINGYCKEGNEKKALEVFEEMSQK-GVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
G+ P + MY+ LINS C ++ A + EM I P ++ L
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTL 400
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 1/224 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G ++ +N LI+ CK + ++A EVF++M ++ +YT L+ + ++
Sbjct: 280 MQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQ 339
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ G PDVV Y +IN+HC+ + A E+ EME P + T
Sbjct: 340 VQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNT 399
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ G RL EA + KRG +P+ +YN ++ Y I DA R+ DEM G
Sbjct: 400 LMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG 459
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
P TY+ ++ L K + ++A ++ K M K G P STY
Sbjct: 460 FNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAK-GITPDDSTY 502
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 143/298 (47%), Gaps = 7/298 (2%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A +F + + R ++ I+L + E+ R+M P+ V+Y +I
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIA 155
Query: 89 AHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG-F 146
C+ R A+E+ REM E P + + TLI+G R+ +A++ F + +G
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEV 215
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P A YNA++G YC +++ A + ++M + GI TY++++H L R +AY+
Sbjct: 216 APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYA 275
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
V + M +K G P V TY I++ +C A+ +++EM +GV Y++LI
Sbjct: 276 VLEEM-QKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVF 334
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ ++ + + F + GIRP +++ L + G E A + +++K R P
Sbjct: 335 SRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPP 392
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 1/271 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N L+ L A V ++M+K F PD+ +Y IL+ G+ ++ N
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN 304
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
EV+ EM G V+Y +I + E LF +P ++
Sbjct: 305 EKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNA 364
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN + + A + + +K+ P+ TYN ++ +C R+++A ++DEM K G
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ +Y+ ++ G ++A V M K G PT+ TY +++ C Q D A
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDK-GFNPTLMTYNALIQGLCKIRQGDDA 483
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ EM A+G+ P Y +LI L ED+
Sbjct: 484 ENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 146/290 (50%), Gaps = 4/290 (1%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+++ LK PD + L+D L K V+ A+ V M K PD+ +Y L+ G+
Sbjct: 505 LNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLL 564
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ V+ M G PDV +Y I+IN C +K DEA+ LF+EM N P
Sbjct: 565 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVT 624
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +L++GL R+S + + RG + TYN+++ C + ++ A + ++M+
Sbjct: 625 YSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMK 684
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI PNT T+ I+L L K GR ++A VF+ + K G V Y +++ C +
Sbjct: 685 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTK-GYHLDVYIYNVMIYGHCKQGLL 743
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ A+ + +M+ G +P + +IN+L +D+ D A K ++M+ G+
Sbjct: 744 EEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 15/329 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G++ +L N LI+ C + V K+ KR + P + L++G GQ K
Sbjct: 337 GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKA 396
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L ++ ++ GF+ + VSY +IN C A++L R+++ KP+ ++ T+
Sbjct: 397 LHFHD---KLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 453
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ L + +SEA F + +G + TY+ ++ +C ++ +A +++EM I
Sbjct: 454 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTI 513
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ RTY I++ L K G+ +EA SV M K +P V TY ++ + +V A
Sbjct: 514 NPDVRTYTILVDALGKEGKVKEAKSVLAVM-LKACVKPDVFTYNTLMNGYLLVYEVKKAQ 572
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+++ M GV P +H Y+ LIN C +D+A F+EM + P +S+L L
Sbjct: 573 HVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGL 632
Query: 302 RDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
G L ID++R DRGQ
Sbjct: 633 CKSGRISYVWDL---IDEMR-----DRGQ 653
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 138/301 (45%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ +CK A ++ K+ R P+++ Y+ +++ + + +
Sbjct: 407 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G DVV+Y +I C + EA+ L EM P + L++
Sbjct: 467 YGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA 526
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
LG E ++ EA K +P+ TYN ++ Y + A + + M G+ P+
Sbjct: 527 LGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPD 586
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+++ K+ +EA ++FK M +K TV TY +V C + ++ +
Sbjct: 587 VHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTV-TYSSLVDGLCKSGRISYVWDLI 645
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM+ RG + Y++LI+ LC LD A F +M D GIRP F+ L L
Sbjct: 646 DEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKG 705
Query: 305 G 305
G
Sbjct: 706 G 706
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 146/307 (47%), Gaps = 1/307 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +ID LCK + V A +F +M + D+ +Y+ L+ G+ L + EM
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDV +Y I+++A + EA + M KP + TL+NG +
Sbjct: 510 LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F G P+ TY ++ +C S +++A + EM + + P+T TY ++
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLV 629
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+GR + + M R G V TY ++ C N +D A+ ++++MK +G+
Sbjct: 630 DGLCKSGRISYVWDLIDEM-RDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGI 688
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P ++ L++ LC +L DA + FQ++L G +++ + +G+ E A+
Sbjct: 689 RPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALT 748
Query: 313 LAQKIDK 319
+ K+++
Sbjct: 749 MLSKMEE 755
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 141/337 (41%), Gaps = 36/337 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D LCK V+ A+ V M K ++ +Y+ L++G+ + V+ M
Sbjct: 206 YNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMS 265
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-------------------------- 106
G PDV SY IMIN C KR D+A+ LF+EM
Sbjct: 266 LMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYST 325
Query: 107 --------EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
E +P LIN +++ + KRG+ P T N ++
Sbjct: 326 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIK 385
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
C ++ A D++ G N +Y +++ + K G T A + +++ + T+
Sbjct: 386 GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL-TK 444
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V Y ++ C V A ++ EM +G+ + YSTLI C KL +A
Sbjct: 445 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGL 504
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLA 314
EM+ I P + ++ L AL EG ++E VLA
Sbjct: 505 LNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLA 541
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 8/291 (2%)
Query: 31 EVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMI 87
V K+ KR + PD + L++G GQ K L ++ ++ GF+ + VSY +I
Sbjct: 49 SVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHD---KLLAQGFQLNQVSYATLI 105
Query: 88 NAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
N C A++ R+++ KP+ ++ T+I+ L + +SEA F + +G
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
TY+ ++ +C ++ +A +++ M I PN TY+I++ L K G+ +EA SV
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
M K + V TY ++ + +V A +++ M GV P +H Y+ +IN C
Sbjct: 226 LAVM-LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFC 284
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
++D A F+EM+ + PP F+ + + TAV L+ +++
Sbjct: 285 KIKRVDKALNLFKEMI-LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLE 334
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 143/356 (40%), Gaps = 33/356 (9%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ +C+ A + K+ R P+++ Y +++ + + +
Sbjct: 93 GFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEA 152
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G +VV+Y +I C + EA+ L M P+ + L++
Sbjct: 153 YGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDA 212
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ EA K + TY+ ++ Y + A + + M G+ P+
Sbjct: 213 LCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 272
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRM--SRKP--------------------------- 215
+Y+I+++ K R ++A ++FK M SR P
Sbjct: 273 VHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHR 332
Query: 216 ----GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
G +P + T I++ FC+ Q+ + ++ RG P +TLI LC + +
Sbjct: 333 LELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQ 392
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
+ A + ++L G + ++ L + G A+ L +KID P V+
Sbjct: 393 VKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVE 448
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 155/318 (48%), Gaps = 11/318 (3%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF L+DTL K +V+ A ++F++ +K +F+ + K YTIL+ GW + + + EM
Sbjct: 190 DFCYLLDTLSKYGYVKLASQIFNQ-RKFKFEANAKMYTILIYGWCKINRVSIAERLLGEM 248
Query: 72 KDDGFEPDVVSYGIMINAHCSAK------RYDEAV----ELFREMEATNCKPSPHIFCTL 121
+ G E +VV+Y +++N C R++ + ++ EM +P + +
Sbjct: 249 VERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIV 308
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ + L K +G P TY +VV C R+ DA ++ +M K G+
Sbjct: 309 IHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGV 368
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY+ ++ A ++++M + P + TY I+V MF ++++
Sbjct: 369 SPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQ 428
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
IWD+MK G P + Y+ LI+ LC + K +AC +F EM++ G P F L + L
Sbjct: 429 EIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGL 488
Query: 302 RDEGMEETAVVLAQKIDK 319
M +T L +K+++
Sbjct: 489 IQSDMLKTWRRLKKKLEE 506
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 16/283 (5%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ----- 57
KF + + LI CK V A+ + +M +R + ++ +Y +LL G +
Sbjct: 215 KFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLH 274
Query: 58 -----QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
++ + +V EM+ G EPDV SY I+I+ + A + + ++ R M+
Sbjct: 275 PDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIW 334
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA--- 169
P+ + +++ L S RL +A + K G P A TYN Y ++A
Sbjct: 335 PTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRL 394
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
YR M E C P+ TY+I++ +K R E ++ M + G P + +Y +++
Sbjct: 395 YRKMKEEYSC--LPDMHTYNILVGMFVKLNRMEIVQEIWDDM-KTSGAGPDLDSYTLLIH 451
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
C + A + EM +G LP + TL L D L
Sbjct: 452 GLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDML 494
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 126/285 (44%), Gaps = 48/285 (16%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--------------------- 117
DVVSY ++I+ +++D A + EM+ + +P+
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAF 175
Query: 118 ---------------FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
FC L++ L + A Q F Q +K FE A Y ++ +C
Sbjct: 176 DDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQ-RKFKFEANAKMYTILIYGWCK 234
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG---------RT-EEAYSVFKRMS 212
R++ A R++ EM + GI N TY+++L+ + + RT +A V M
Sbjct: 235 INRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEM- 293
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
R+ G EP V++Y IV+ ++ + ++ + MK +G+ P + Y++++ LC +L
Sbjct: 294 RQKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRL 353
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+DA + +M+ G+ P ++ + R + A+ L +K+
Sbjct: 354 EDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKM 398
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 119/293 (40%), Gaps = 88/293 (30%)
Query: 5 GLKQELPDFNRLIDTLCK----------SRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
G++ + +N L++ +C+ R + A++V D+M+++ +PD+ SY+I++
Sbjct: 252 GIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVIHV 311
Query: 55 WGQ-QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY----------------- 96
+ + K L+++++ R MKD G P V +Y ++ CS R
Sbjct: 312 YSRAHKPELTLDKL-RMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSP 370
Query: 97 ------------------DEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
D A+ L+R+M E +C P H
Sbjct: 371 SAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMH--------------------- 409
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
TYN +VG + R+ + D+M+ G GP+ +Y +++H L +
Sbjct: 410 --------------TYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCE 455
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+ +EA F M K G P T+E + R Q DM ++ W +K +
Sbjct: 456 KQKWKEACHFFVEMIEK-GYLPQKITFETLYRGLI---QSDM-LKTWRRLKKK 503
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I+ L K+ ++ A+ + ++M R PD ++ L+ Q L ++ RE+
Sbjct: 338 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELT 397
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV ++ I+INA C + LF EM+++ C P + LI+ L S +L
Sbjct: 398 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLV 457
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL + + G TYN ++ A C MRI +A + D+M GI + T++ ++
Sbjct: 458 NALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLI 517
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KA R ++A + ++M K G +P+ TY ++ +C + A I + M A G
Sbjct: 518 DGLCKAKRIDDATELIEQMV-KEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGF 576
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ Y TLIN LC + A K + M GIRP + ++ + Q+L
Sbjct: 577 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 625
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 147/305 (48%), Gaps = 2/305 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ FN LI+ LCK +F++MK PD +Y IL++ L++
Sbjct: 400 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNA 459
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +EM+ +G V+Y +I+A C R +EA E+F +M+A S F TLI+G
Sbjct: 460 LDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDG 519
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L KR+ +A + Q K G +P TYN+++ YC + A +++ M G +
Sbjct: 520 LCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEID 579
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ L KAGRT+ A + + M R G PT Y V++ + A+ ++
Sbjct: 580 VVTYGTLINGLCKAGRTQVALKLLRGM-RIKGIRPTPKAYNPVIQSLFRRNNLRDALSLF 638
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK-LDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM G P Y + LC + +A + EM++ G P F L + L +
Sbjct: 639 REMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLN 698
Query: 304 EGMEE 308
GM++
Sbjct: 699 LGMDD 703
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 139/289 (48%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++ FG++ + +N L++ L + ++ + V+++M R PD+ + L++ +
Sbjct: 151 LNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQ 210
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EM PD ++ ++ + A+ + +M T C P+
Sbjct: 211 VRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNV 270
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING R+ +AL + + GFEP+ TYN V C + ++ A ++MD M + G
Sbjct: 271 LINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEG 330
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ V++ L K G +EA + +M + G P +T+ ++ C +++ A
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR-GCLPDTTTFNTLIVALCSQNRLEEA 389
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + E+ +G+ P ++ ++ LIN+LC + F+EM G P
Sbjct: 390 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP 438
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G+ + FN LID LCK++ ++ A E+ ++M K P +Y +L + +Q +
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGD 560
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ M +GFE DVV+YG +IN C A R A++L R M +P+P +
Sbjct: 561 LKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 620
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC-WSMRINDAYRMMDEMRKC 179
+I L L +AL F + + G P+A TY V C I +A+ + EM
Sbjct: 621 VIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNK 680
Query: 180 GIGPNTRTYDIVLHHLIKAG 199
G P ++ ++ L+ G
Sbjct: 681 GFMPEFSSFRMLAEGLLNLG 700
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 143/344 (41%), Gaps = 36/344 (10%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ D +RL+ L + E A ++ + R F P Y +++ G M +
Sbjct: 53 ISDQDRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLV 112
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR-EMEATNCKPSPHIFCTLINGLGS 127
REM+ +G E + ++ +R+D+AV+L R ++ + ++ L+N L
Sbjct: 113 REMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAE 172
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
R+ + + RG +P+ T N ++ A C + ++ A M++EM + P+ T
Sbjct: 173 GSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETT 232
Query: 188 YDIVLHHLIKAGRTEEAYSV----------------------FKRMSR------------ 213
+ ++ I+ G E A V + +M R
Sbjct: 233 FTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEI 292
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
G EP TY V C N V A+++ D M G P + Y+T+IN L +LD
Sbjct: 293 ADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 352
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+A +M+D G P F+ L AL + E A+ LA+++
Sbjct: 353 EAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL 396
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 2/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + +N +ID LCK +E A+EVFD+M ++ L++G + K
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKR 525
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M +G +P ++Y ++ +C +A ++ M A + + T
Sbjct: 526 IDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGT 585
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL R AL+ + +G P YN V+ + + DA + EM + G
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVG 645
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIV 227
P+ TY IV L + G +EA+ M K G P S++ ++
Sbjct: 646 EPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNK-GFMPEFSSFRML 692
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 150/321 (46%), Gaps = 34/321 (10%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
++G ++ +N LI+ CK + A+ +F++++KR P S+ L+ G + +NL
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ + M+++ PDV +Y ++I+ C R D A +LF EM+ +P+ F LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +R+ A+ + Q G +P+ YN ++ C +N A +++DEMR G+
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMK 395
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK---------------------------- 214
P+ TY ++ K G E A + K M+ +
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 215 ------PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
G +P +TY +V+ +C V M ++ EM+ G P + Y+ L+N LC
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515
Query: 269 EDKLDDACKYFQEMLDIGIRP 289
+ ++ +A + ML++G+ P
Sbjct: 516 QGQMKNANMLLEAMLNLGVTP 536
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 1/274 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+D + S + ++ + F P ++ Y IL+ + ++ ++ ++ E++ G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P VS+ +IN C ++ DE L + ME P + LI+GL E RL A
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q F + ++RG P T+ A++ C S RI+ A +M G+ P+ Y+ +L+ L
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G +A + M R G +P TY ++ +C ++ AM I M GV+
Sbjct: 374 CKVGDVNKARKLVDEM-RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ LI+ C + ++ DA + +EM++ G++P
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 133/293 (45%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L+ S V A + F ++ F LL+ + +++ Y E+
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF P V Y I+IN C +A +F E+ +P+ F TLINGL + L
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + ++ P+ TY+ ++ C R++ A ++ DEM++ G+ PN T+ ++
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
++ R + A + + +M G +P + Y ++ C V+ A ++ DEM+ G+
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTM-GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGM 394
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P Y+TLI+ C E L+ A + + M + G+ F+ L +G
Sbjct: 395 KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 128/264 (48%), Gaps = 4/264 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ F LID C+SR ++ A + +M PD+ Y LL G + +
Sbjct: 319 MQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ G +PD ++Y +I+ +C + A+E+ + M F
Sbjct: 379 VNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + R+ +A + + + G +P+ TY V+ YC + ++++ EM+ G
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY+++++ L K G+ + A + + M G P TY I++ C N + +
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAM-LNLGVTPDDITYNILLEGHCKNGKAEDL 557
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN 264
+++ +E +G++ Y++L++
Sbjct: 558 LKLRNE---KGLIVDYAYYTSLVS 578
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 185 TRTYDIVLHHLIKA----GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TR + V L+ A G +A F+ + P ++ +M N+ V +
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTI- 207
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ E+ G P + Y+ LIN C E + DA F E+ G+RP F+ L
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267
Query: 301 L 301
L
Sbjct: 268 L 268
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 151/305 (49%), Gaps = 5/305 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ TLC+ + + A+ V+ +K F PD++++ ILL GW K+ + EM+
Sbjct: 200 FNALLRTLCQEKSMRDARNVYHSLK-HDFRPDLRTFNILLSGW---KSAEEAEGFFDEMR 255
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G EPDVVSY +I+ +C + + A ++ +M P + ++I GLG +
Sbjct: 256 EMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQISPDVISYTSIIGGLGLVGQPD 315
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + K+ G P+ YNA + +C + R+ DA +MDEM G+ PN TY++
Sbjct: 316 KARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADGLMDEMVGKGLSPNATTYNLFF 375
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + +++RM +K G P + + R+F +V+MA+ +W++M +G
Sbjct: 376 RCFYWSNDLGRSCGLYQRM-KKTGCLPNTQSCMFLTRLFRRQEKVEMALELWNDMVEKGF 434
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ + L + LC KL + K +M++ G +P F +K + E
Sbjct: 435 GSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHKPSNVSFRRIKVLMELANKHEALQN 494
Query: 313 LAQKI 317
L +K+
Sbjct: 495 LTEKM 499
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 137/275 (49%), Gaps = 2/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+D LCK + AQ VF M KR PDI +Y L+EG+ N+ E++ M
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPDV++Y ++IN +C DEA+ LF+E+ N P+ + +LI+GL R+S
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS 387
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + RG P+ TYN + A+C S A + ++ + GI P+ YD+++
Sbjct: 388 CVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIV 446
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K + + A + + G P V TY I++ C + D AM + +M
Sbjct: 447 ENFCKGEKLKIAEEALQHLLIH-GCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDC 505
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
P + T+I +L ++ D A K EM++ G+
Sbjct: 506 PPDAVTFETIIGALQERNETDKAEKLRLEMIERGL 540
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 151/302 (50%), Gaps = 3/302 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + LI+ C H+ A + + K F P++ ++ L+ G+ ++S
Sbjct: 85 GITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCIN-GMVSK 143
Query: 65 NEVYR-EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+R ++ G+ D SYG +IN C + +A++L ++ME +P+ + T+I+
Sbjct: 144 AMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVID 203
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL ++ +++AL+ F RG + YN+++ C + +A R++ M + I P
Sbjct: 204 GLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINP 263
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ T++I++ L K GR EA VF M ++ G +P + TY ++ FC + V A +
Sbjct: 264 DDYTFNILVDALCKEGRIVEAQGVFAVMMKR-GEKPDIVTYNALMEGFCLSNNVSEAREL 322
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++ M RG+ P + Y+ LIN C D +D+A F+E+ + P +++L L
Sbjct: 323 FNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCK 382
Query: 304 EG 305
G
Sbjct: 383 LG 384
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 14/319 (4%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQK 59
++ L ++ +ID LCK R + A +F + R D+ +Y L+ G W +
Sbjct: 191 VRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREAT 250
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
LL+M M PD ++ I+++A C R EA +F M KP +
Sbjct: 251 RLLTM------MVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYN 304
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L+ G +SEA + F + KRG EP+ YN ++ YC +++A + E+R
Sbjct: 305 ALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCK 364
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ PN TY+ ++ L K GR + M + G P + TY I + FC + +
Sbjct: 365 NLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDR-GQSPDIVTYNIFLDAFCKSKPYEK 423
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ ++ ++ +G+ P +MY ++ + C +KL A + Q +L G P + ++ +
Sbjct: 424 AISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMIN 482
Query: 300 ALRDEGMEETAVVLAQKID 318
AL + + A+ L K+D
Sbjct: 483 ALCKDCSFDEAMTLLSKMD 501
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 138/277 (49%), Gaps = 2/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI+ LCK+ A ++ KM++ P++ +Y+ +++G + + + ++ +
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G DVV+Y +I+ CS ++ EA L M N P + F L++ L E R+
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F KRG +P+ TYNA++ +C S +++A + + M K G+ P+ Y++++
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K +EA +FK + R P ++TY ++ C ++ + DEM RG
Sbjct: 343 NGYCKIDMVDEAMVLFKEI-RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQ 401
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + Y+ +++ C + A F++++ GI P
Sbjct: 402 SPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWP 437
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 149/325 (45%), Gaps = 10/325 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N LI C A + M + +PD ++ IL++ ++ ++
Sbjct: 225 GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEA 284
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G +PD+V+Y ++ C + EA ELF M +P + LING
Sbjct: 285 QGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLING 344
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EA+ F + + + P TYN+++ C R++ ++DEM G P+
Sbjct: 345 YCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPD 404
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I L K+ E+A S+F+++ + G P Y+++V FC ++ +A
Sbjct: 405 IVTYNIFLDAFCKSKPYEKAISLFRQIVQ--GIWPDFYMYDVIVENFCKGEKLKIAEEAL 462
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ G P + Y+ +IN+LC + D+A +M D P F + AL++
Sbjct: 463 QHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQER 522
Query: 305 GMEETAVVLAQKIDKLRKTPLVDRG 329
ET K +KLR +++RG
Sbjct: 523 --NET-----DKAEKLR-LEMIERG 539
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 2/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K ++ +N L++ C S +V A+E+F++M KR +PD+ +Y +L+ G+ +
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDM 350
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++E++ P++ +Y +I+ C R EL EM P +
Sbjct: 351 VDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNI 410
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ K +A+ F Q + G P+ Y+ +V +C ++ A + + G
Sbjct: 411 FLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHG 469
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN RTY I+++ L K +EA ++ +M P T+E ++ + D A
Sbjct: 470 CCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDN-DCPPDAVTFETIIGALQERNETDKA 528
Query: 241 MRIWDEMKARGVL 253
++ EM RG++
Sbjct: 529 EKLRLEMIERGLV 541
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P F+ + DTL F++M ++ P I + LL + + + ++ +
Sbjct: 31 PKFHTVDDTLLS----------FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQ 80
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ G P + + I+IN +C A L + +P+ F TLING
Sbjct: 81 LHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGM 140
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+S+A+ F +G+ + +Y +++ C + + DA +++ +M + + PN TY
Sbjct: 141 VSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYST 200
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
V+ L K +A +F ++ + G V Y ++ C Q A R+ M
Sbjct: 201 VIDGLCKDRLIADALRLFSLVTSR-GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRG 259
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ P + ++ L+++LC E ++ +A F M+ G +P
Sbjct: 260 NINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKP 298
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++D + M + P +D +L +++ G A S+F ++ K G P+++T
Sbjct: 36 VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSK-GITPSIATLT 94
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
I++ +C+ A + A + + G P M ++TLIN C + A + +++
Sbjct: 95 ILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK 154
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
G + +L L G A+ L QK+++
Sbjct: 155 GYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEE 188
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 156/319 (48%), Gaps = 20/319 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N +D L K+ + A E F +M++R + PD +Y+I+L G + L
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFCTLIN 123
E+ ++++ G + +V++Y ++I+ C A R D+A+E+F+ M + C P F +L+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL S +R+SEA F K G EP +Y+ ++ C + R+++A R+ +EM + P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ Y + L KA R EA ++M K G++ + V+ + C + A
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTK-GSKADAVAFSTVIGILCKKGHAEEAQ-- 269
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ +I LC LD+ACK F+EM+ P +LF+ L A+
Sbjct: 270 ----------------NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCK 313
Query: 304 EGMEETAVVLAQKIDKLRK 322
V+L Q++ +++
Sbjct: 314 SKRLPDGVLLFQRMKSMKE 332
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 158/340 (46%), Gaps = 20/340 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLS 63
G+K + ++ +ID CK+ V+ A E+F M PD+ ++ LL+G + +
Sbjct: 103 GVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSE 162
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ M G EP+V+SY +++ C A R DEA L+ EM +C P + + +
Sbjct: 163 AFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVT 222
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA-----------------YCWSMRI 166
GL R++EA + +G + +A ++ V+G C S +
Sbjct: 223 GLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGML 282
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS--RKPGTEPTVSTY 224
++A + +EM P+ ++ ++H + K+ R + +F+RM ++ P + TY
Sbjct: 283 DEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETY 342
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
I+V C Q+D A + +EM G+ P + YS L++ LC KLD AC +EM
Sbjct: 343 NIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSK 402
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G+ P +++ AL G + A+ + + TP
Sbjct: 403 EGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP 442
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 164/344 (47%), Gaps = 21/344 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + ++ L+D LCK+ ++ A ++++M ++ PD+ +YT + G +
Sbjct: 170 MAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANR 229
Query: 61 LLSMNEVYREMKDDGFEPDVVSY----GI-------------MINAHCSAKRYDEAVELF 103
+ + R+M G + D V++ GI MI C + DEA + F
Sbjct: 230 VAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK-RGF--EPEAPTYNAVVGAY 160
EM + N PS +F TLI+ + KRL + + F + K + F P TYN +V
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL 349
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C + ++++A +++EM G+ P+ TY ++ L K G+ + A + + MS K G P
Sbjct: 350 CKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMS-KEGVFPD 408
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
T ++ +VD A+ + MKARG P + Y+TL++ LC ++D+A +
Sbjct: 409 SFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLA 468
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+M+ P ++ + AL G A + Q++ K P
Sbjct: 469 KMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLP 512
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 156/349 (44%), Gaps = 48/349 (13%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL---LSMNEVYRE 70
N++I+ LC+S ++ A + F++M R P + + L+ + K L + + + +
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
MK+ P++ +Y IM++ C AK+ DEA EL EM P + L++GL +
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L A + K G P++ T +++ A + +++ A ++ M+ G P+ TY+
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L L KAGR +EA + +M T P V +Y I++ C + Q A I+ EM R
Sbjct: 450 LLDGLCKAGRIDEAITFLAKMVAAKCT-PDVFSYTIIITALCRSGQAAGAHAIFQEMVKR 508
Query: 251 GVLPVMHMYSTL--------------------------------INSLCHEDKLDDACKY 278
GVLP +Y +L ++ LC K +DAC+
Sbjct: 509 GVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEV 568
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
+ M D G + ++ LR G K+DK R+ LVD
Sbjct: 569 VERMADAGFPADAFTYISVVSGLRKLG----------KVDKARQ--LVD 605
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G++ V +Y ++A A A E F++M+ P + ++ GL L +A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-CGIGPNTRTYDIVLH 193
+ GQ ++ G + TY+ V+ C + R++DA + M G P+ T++ +L
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L R EA+ +F+ M+ K G EP V +Y ++ C ++D A R+W+EM + +
Sbjct: 153 GLCSGERMSEAFVLFEYMA-KAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCV 211
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y++ + LC +++ +AC ++M+ G + FS + L +G E A
Sbjct: 212 PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ-- 269
Query: 314 AQKIDKLRKTPLVD 327
Q I+ L ++ ++D
Sbjct: 270 NQMIEHLCRSGMLD 283
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 3/175 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G +L +N L+D LCK+ ++ A KM + PD+ SYTI++ +
Sbjct: 435 MKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQ 494
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM G PD V Y +++ D A+EL + + CKP +
Sbjct: 495 AAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFVMHKM 551
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+++GL + +A + + GF +A TY +VV +++ A +++D+
Sbjct: 552 VLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
VL HL G+ +F + R+ G + +V TY + +A + +M+ R
Sbjct: 11 VLRHL---GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR 67
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
G P YS ++ LC +LD A + ++ + G++
Sbjct: 68 GYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVK 105
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 152/311 (48%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + + I LC+ +E A+++F+ MK P++ +Y+ +++G+ + N
Sbjct: 259 MTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGN 318
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +Y+E+ P+VV +G +++ C A+ A LF M P+ +++
Sbjct: 319 LRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNC 378
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + EA+ + + P+ TY ++ C R+ +A R+ M+
Sbjct: 379 LIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNER 438
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P++ TY+ ++H K E+A + M+ G EP + T+ ++ +C + A
Sbjct: 439 IFPSSVTYNSLIHGFCKEYNIEKALDLCSEMT-SSGVEPNIITFSTLIDGYCKVRNIKAA 497
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M ++ EM +G++P + Y+TLI++ E + +A + + +ML+ GI P F+ L
Sbjct: 498 MGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 557
Query: 301 LRDEGMEETAV 311
EG A+
Sbjct: 558 FWKEGRLSDAI 568
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 140/281 (49%), Gaps = 1/281 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ L ++ +ID CK+ ++ +A ++ ++ P++ + L++G+ + +
Sbjct: 294 MKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 353
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L++ ++ M G +P++ Y +I+ C + EA+ L EME+ N P +
Sbjct: 354 LVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTI 413
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL +E+RL+EA + F + K P + TYN+++ +C I A + EM G
Sbjct: 414 LINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSG 473
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN T+ ++ K + A ++ M+ K G P V TY ++ A + A
Sbjct: 474 VEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIK-GIVPDVVTYTTLIDAHFKEANMKEA 532
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
+R++ +M G+ P H ++ L++ E +L DA ++ E
Sbjct: 533 LRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLE 573
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 150/323 (46%), Gaps = 7/323 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KFG+ L +N LI CKS ++ A + +M+ PD+ +YTIL+ G ++
Sbjct: 364 MVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEER 423
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N +++ MK++ P V+Y +I+ C ++A++L EM ++ +P+ F T
Sbjct: 424 LAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFST 483
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + + A+ + + +G P+ TY ++ A+ + +A R+ +M + G
Sbjct: 484 LIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAG 543
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS-------TYEIVVRMFCY 233
I PN T+ ++ K GR +A + ++ + V + ++ C
Sbjct: 544 IHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQ 603
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
N + A R + +MK+ GV P + Y +++ + E ++ D +M+ GI P +
Sbjct: 604 NGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMV 663
Query: 294 FSNLKQALRDEGMEETAVVLAQK 316
L ++ G +A L
Sbjct: 664 NQLLAMFYQENGYLRSACFLTNS 686
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 3/282 (1%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
++ R PD K+ +L G +++ S+ Y+ M G PDV Y ++ C + +
Sbjct: 190 REMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQC-CFKQGF 248
Query: 97 DEAVE-LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
E L EM + KP+ +I+ I L E ++ EA + F K G P TY+A
Sbjct: 249 PSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSA 308
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ YC + + AY + E+ + PN + ++ KA A S+F M K
Sbjct: 309 MIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMV-KF 367
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G +P + Y ++ C + + AM + EM++ + P + Y+ LIN LC E++L +A
Sbjct: 368 GVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEA 427
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ FQ M + I P +++L E E A+ L ++
Sbjct: 428 NRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEM 469
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ ++I +++A+ + REM C P ++NGL +R +
Sbjct: 169 FSLLIMEFLEMGLFEDALWVSREMR---CSPDSKACLAILNGLVRRRRFDSVWVDYQLMI 225
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRI-NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
RG P+ Y +V+ C+ + +++DEM G+ PN Y I + L + +
Sbjct: 226 SRGLVPDVHIY-SVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKM 284
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EEA +F+ M + G P + TY ++ +C + A ++ E+ +LP + ++ T
Sbjct: 285 EEAEKMFELM-KIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGT 343
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
L++ C +L A F M+ G+ P +++ L G A+ L +++ L
Sbjct: 344 LVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLN 403
Query: 322 KTP 324
+P
Sbjct: 404 LSP 406
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 4/258 (1%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V REM+ PD + ++N +R+D ++ M + P HI+ L
Sbjct: 188 VSREMRCS---PDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCF 244
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ S+ + + G +P Y + C ++ +A +M + M+ G+ PN
Sbjct: 245 KQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLY 304
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ K G +AY ++K + P V + +V FC ++ A ++
Sbjct: 305 TYSAMIDGYCKTGNLRQAYGLYKEILVAE-LLPNVVVFGTLVDGFCKARELVAARSLFVH 363
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M GV P +++Y+ LI+ C + +A EM + + P ++ L L E
Sbjct: 364 MVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEER 423
Query: 307 EETAVVLAQKIDKLRKTP 324
A L Q++ R P
Sbjct: 424 LAEANRLFQRMKNERIFP 441
>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 543
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 140/305 (45%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + N +I+ LC+ H V M K +P I ++T ++ G + N
Sbjct: 52 MSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGN 111
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +KD G+E D + G +IN C A+ ++ME NC +
Sbjct: 112 VAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSA 171
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL + + EAL F Q +G +P TYN ++ C R +A ++ M + G
Sbjct: 172 VVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKG 231
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ +T++++ +K G A S+F M G E V TY ++ C Q+ A
Sbjct: 232 IMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHM-GIEHNVVTYNSIIGAHCMLNQMKDA 290
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M ++D M +G LP + Y++LI+ C ++ A + EM++ G+ P +S L
Sbjct: 291 MEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGG 350
Query: 301 LRDEG 305
G
Sbjct: 351 FCKAG 355
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 147/297 (49%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L +N LI LC + A + M ++ PD++++ ++ + + +
Sbjct: 196 GIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRA 255
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M G E +VV+Y +I AHC + +A+E+F M C P+ + +LI+G
Sbjct: 256 KSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHG 315
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K +++A+ F G+ G +P+ T++ ++G +C + + A + M K G P+
Sbjct: 316 WCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPD 375
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+T I+L L K EA S+F+ + K ++ + Y I++ C + +++ A+ ++
Sbjct: 376 LQTCAIILDGLFKCHFHSEAMSLFREL-EKMNSDLDIIIYSIILNGMCSSGKLNDALELF 434
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ ++GV + Y+ +IN LC E LDDA +M + G P ++ Q L
Sbjct: 435 SYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGL 491
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ + +N +I C ++ A EVFD M ++ P+I +Y L+ GW + KN
Sbjct: 262 MGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKN 321
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM ++G +PDVV++ +I C A + A ELF M P
Sbjct: 322 MNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAI 381
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL SEA+ F + +K + + Y+ ++ C S ++NDA + + G
Sbjct: 382 ILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKG 441
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + TY+I+++ L K G ++A + +M G P TY + V+ ++ +
Sbjct: 442 VKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEEN-GCPPDECTYNVFVQGLLRRYEISKS 500
Query: 241 MRIWDEMKARG 251
+ MK +G
Sbjct: 501 TKYLMFMKGKG 511
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 140/339 (41%), Gaps = 36/339 (10%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+I+ LCK H A KM+++ + D+ +Y+ +++G + + +++ +M G
Sbjct: 137 IINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKG 196
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+P++ +Y +I+ C+ R+ EA L M P F + +S A
Sbjct: 197 IQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAK 256
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F G E TYN+++GA+C ++ DA + D M + G PN TY+ ++H
Sbjct: 257 SIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGW 316
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ +A M G +P V T+ ++ FC + A ++ M G LP
Sbjct: 317 CETKNMNKAMYFLGEMVNN-GLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPD 375
Query: 256 MH-----------------------------------MYSTLINSLCHEDKLDDACKYFQ 280
+ +YS ++N +C KL+DA + F
Sbjct: 376 LQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFS 435
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ G++ ++ + L EG+ + A L K+++
Sbjct: 436 YLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEE 474
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 95/233 (40%), Gaps = 1/233 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P V + ++ K Y A+ L + M KP+ +IN L
Sbjct: 24 PCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSV 83
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G K G EP T+ +V C + A R +D ++ G + T +++ L K
Sbjct: 84 LGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCK 143
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G + A S K+M + V+ Y VV C + V A+ ++ +M +G+ P +
Sbjct: 144 VGHSSAALSYLKKMEEQ-NCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLF 202
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
Y+ LI+ LC+ D+ +A M+ GI P Q F+ + GM A
Sbjct: 203 TYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRA 255
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ ++ LI CK+ A+E+F M K PD+++ I+L+G +
Sbjct: 336 GLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEA 395
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++RE++ + D++ Y I++N CS+ + ++A+ELF + + K + +ING
Sbjct: 396 MSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMING 455
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E L +A + ++ G P+ TYN V I+ + + + M+ G N
Sbjct: 456 LCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRAN 515
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVF 208
T +++++ A + A+ VF
Sbjct: 516 ATTTKLLINYF-SANKENRAFQVF 538
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 1/178 (0%)
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
K + AL F+ + P +N + G A ++ M G+ PN T+
Sbjct: 5 KSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTH 64
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+IV++ L + T +SV M K G EP++ T+ +V C V A+R D +K
Sbjct: 65 NIVINCLCRLNHTVFGFSVLGLM-FKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLK 123
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
G + +IN LC A Y ++M + +S + L +GM
Sbjct: 124 DMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGM 181
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 143/288 (49%), Gaps = 7/288 (2%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FG L +F L+ LC+ ++V+ A+ + K F + KS+ I+L GW +L
Sbjct: 143 RFGFNIGLEEFQSLLSALCRYKNVKDAEYLL-FCNKDVFPFNTKSFNIILNGWCVIGSLR 201
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
V++EM G D VSY I+ + + + + LF +M+ P ++ +I
Sbjct: 202 DTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVI 261
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L + L EA +++G TYN+V+ C + R ++A + +E+ + G+
Sbjct: 262 HSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLC 321
Query: 183 PNTRTYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P +TY H ++ RT EE + + K+M R G PT TY +++R FC Q+D
Sbjct: 322 PTIQTY----HAFLRFLRTEEEIFELLKKM-RTMGCNPTTDTYIMLIRKFCRWRQLDNVS 376
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
RIW EM G+ P Y LI+ L KL+DA KY+ EM + + P
Sbjct: 377 RIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAHKYYLEMKEKDLLP 424
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 3/214 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + I K R++ + +F+ MK+ + DPD K Y ++ + +
Sbjct: 210 MTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRC 269
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ + M++ G +VV+Y +I C A+R+DEA +F E+ P+ +
Sbjct: 270 LKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHA 329
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ L +E+ + E L+ + + G P TY ++ +C ++++ R+ EM + G
Sbjct: 330 FLRFLRTEEEIFELLK---KMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENG 386
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
I P+ +Y +++H L G+ E+A+ + M K
Sbjct: 387 ISPDRSSYIVLIHGLFLNGKLEDAHKYYLEMKEK 420
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 80/160 (50%), Gaps = 4/160 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G+ + +N +I LCK+R + A+ VF+++ +R P I++Y L ++
Sbjct: 280 MEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHAFLRFLRTEEE 339
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ ++M+ G P +Y ++I C ++ D ++ EM P +
Sbjct: 340 IF---ELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYIV 396
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
LI+GL +L +A +++ + K++ PE P + V+ +
Sbjct: 397 LIHGLFLNGKLEDAHKYYLEMKEKDLLPE-PKIDEVLQTW 435
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 130/329 (39%), Gaps = 49/329 (14%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI---KSYTILLEGWGQQKNL 61
G + +++ +I L K R + A + D+M+ + ++ I++ + ++
Sbjct: 72 GYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDV 131
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF---REMEATNCKPSPHIF 118
+ K GF + + +++A C K +A L +++ N K F
Sbjct: 132 AKAINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKS----F 187
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++NG L + + + + +RG +A +Y + + Y ++ R+ ++M++
Sbjct: 188 NIILNGWCVIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKR 247
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P+ + Y+ V+H L K +EA + K M K
Sbjct: 248 MKIDPDRKVYNAVIHSLAKGRCLKEAADLIKTMEEK------------------------ 283
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
G++ + Y+++I LC + D+A F+E+L G+ P Q +
Sbjct: 284 ------------GIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHAFL 331
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTPLVD 327
+ LR EE L +K+ + P D
Sbjct: 332 RFLR---TEEEIFELLKKMRTMGCNPTTD 357
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 160/326 (49%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ ++ LID C+ V++A EVF +M+ P+I SY+IL++G+ ++
Sbjct: 306 MKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGR 365
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EV+ EMK+ G PDV SY I+I+ C D A++ + EM + N PS +C+
Sbjct: 366 VDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCS 425
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G K+ + AL+ F +K G P+ N ++ YC N A + ++ ++ G
Sbjct: 426 LIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENG 485
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N +Y+ +H + + E+A + M ++ P V Y ++ F + A
Sbjct: 486 VHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKR-NVLPDVVNYSTLISCFAKRLNSEKA 544
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ +M G+ + Y+ LIN + K+D A + F+ M + + P +++L
Sbjct: 545 VMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAG 604
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
+ G A L ++ + +P V
Sbjct: 605 FCNTGEMTRARALFDEMSREGCSPNV 630
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 5/289 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLE----GWGQQKN 60
G++ + N L+ L + V+ + +F+ + K P+I +YTI++ G G +
Sbjct: 166 GIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVD 225
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E+ ++ G P+VV+YG I C + A L + + N + H F
Sbjct: 226 IRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNA 285
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL L EA + F + K G P+ +Y+ ++ +C R++ A + EMR G
Sbjct: 286 VIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSG 345
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN +Y I++ K GR ++A VF+ M + G P V +Y I++ FC +D A
Sbjct: 346 ILPNIYSYSILIDGFCKEGRVDKALEVFEEM-KNSGILPDVYSYSILIDGFCRKGDMDSA 404
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ W+EM + P Y +LI + +A K F+ M +G+ P
Sbjct: 405 IKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWP 453
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 163/364 (44%), Gaps = 41/364 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + ++ LID CK V++A EVF++MK PD+ SY+IL++G+ ++ +
Sbjct: 341 MRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGD 400
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP------- 113
+ S + + EM + F P +Y +I + +K++ A++ FR M+ P
Sbjct: 401 MDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNH 460
Query: 114 ----------------------------SPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+P+ + I+ + +ALQ KR
Sbjct: 461 ILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRN 520
Query: 146 FEPEAPTYNAVVGAYCWSMRIND--AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P+ Y+ ++ C++ R+N A + +M K GI N +TY I+++ I + +
Sbjct: 521 VLPDVVNYSTLIS--CFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDV 578
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
AY +FK M ++ P Y +V FC ++ A ++DEM G P + Y+ I
Sbjct: 579 AYRLFKGM-KESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFI 637
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRK 322
N +K + A K +++M + G+ P L++ L A + G M + + + R
Sbjct: 638 NEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRC 697
Query: 323 TPLV 326
TP V
Sbjct: 698 TPNV 701
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 144/322 (44%), Gaps = 23/322 (7%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K+E D L+ L VE++ VFD +L++ + L N
Sbjct: 116 KEENRDAGELVSLLLD---VEKSNVVFD---------------MLIKVFASNSMLEHANY 157
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN--- 123
V+ KDDG E +++S ++ R D LF + +P+ H + ++N
Sbjct: 158 VFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFC 217
Query: 124 -GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
G+G + A + G+ G P TY + C A+R++ + +
Sbjct: 218 RGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQP 277
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
N ++ V++ L + G +EA VFK M + G P V +Y I++ FC +VD A
Sbjct: 278 LNNHCFNAVIYGLCQGGILDEASEVFKEM-KNSGILPDVYSYSILIDGFCRKGRVDQASE 336
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ EM+ G+LP ++ YS LI+ C E ++D A + F+EM + GI P +S L
Sbjct: 337 VFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFC 396
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
+G ++A+ +++ +P
Sbjct: 397 RKGDMDSAIKFWEEMTSNNFSP 418
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 115/241 (47%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N I +C+ E+A ++ M KR PD+ +Y+ L+ + ++ N ++ +M
Sbjct: 492 SYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKM 551
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G +V +Y I+IN S + D A LF+ M+ + P + +L+ G + +
Sbjct: 552 TKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEM 611
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ A F + + G P TY + Y + N A+++ ++M++ G+ P+ Y ++
Sbjct: 612 TRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTML 671
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ G A ++F M ++ P V Y ++ + + D A ++++EM+A+G
Sbjct: 672 IAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG 731
Query: 252 V 252
+
Sbjct: 732 L 732
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 14/294 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLE----GWG 56
M K G+ + N ++ C+ +A + +K ++ + SY + G
Sbjct: 446 MQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSV 505
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD--EAVELFREMEATNCKPS 114
+K L ++ M PDVV+Y +I+ C AKR + +AV LF +M +
Sbjct: 506 PEKAL----QLLPVMLKRNVLPDVVNYSTLIS--CFAKRLNSEKAVMLFIKMTKVGITFN 559
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ LIN S+ ++ A + F K+ P+ Y ++V +C + + A + D
Sbjct: 560 VKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFD 619
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM + G PN TY ++ +K + +A+ ++++M + G P Y +++ FC
Sbjct: 620 EMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKER-GVYPDQILYTMLIAAFCNT 678
Query: 235 AQVDMAMRIWDEMKARG-VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+++ A ++DEMK G P + MY+ LINS +K D A K ++EM G+
Sbjct: 679 GEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 152/301 (50%), Gaps = 3/301 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+ ++ FN LI C ++ A +F +M + +PD+ +++IL++ + N+
Sbjct: 230 ISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAK 289
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ M G PDVV+Y +++ +C ++A +F M P H + +INGL
Sbjct: 290 NMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGL 349
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
G K + EAL F + +G P+ TYN+++ C RI+ A++++DEM GI +
Sbjct: 350 GKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADI 409
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ ++ L K ++A ++ K++ + G +P++ TY I++ C ++ A ++
Sbjct: 410 LTYNSLIDVLCKNHHIDKAIALVKKI-KDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQ 468
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL--RD 303
++ +G Y+ +IN LC E ++A +M + GI P + + +AL +D
Sbjct: 469 DLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKD 528
Query: 304 E 304
E
Sbjct: 529 E 529
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 144/307 (46%), Gaps = 1/307 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + + LI+ LCK A ++ K++ + + D+ Y I++ + K +
Sbjct: 158 LGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSD 217
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y EM PDVV++ +I C + EA LF EM N P + F L++
Sbjct: 218 AYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVD 277
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L + ++ A K+G P+ TY++++ YC +N A + M + G+ P
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAP 337
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ +Y+I+++ L K +EA S+FK M K G P TY ++ C ++ A ++
Sbjct: 338 HAHSYNIMINGLGKIKMVDEALSLFKEMCCK-GIAPDTVTYNSLIDGLCKLGRISYAWQL 396
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
DEM G+ + Y++LI+ LC +D A +++ D GI+P ++ L L
Sbjct: 397 VDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCK 456
Query: 304 EGMEETA 310
G + A
Sbjct: 457 GGRLKNA 463
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 146/295 (49%), Gaps = 10/295 (3%)
Query: 2 DKFGLKQEL------PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ FGL E+ PD F+ L+D LCK ++ RA+ + M K+ PD+ +Y+ L+
Sbjct: 252 EAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLM 311
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+G+ + V+ M G P SY IMIN K DEA+ LF+EM
Sbjct: 312 DGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIA 371
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P + +LI+GL R+S A Q + G + TYN+++ C + I+ A +
Sbjct: 372 PDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIAL 431
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ +++ GI P+ TY+I++ L K GR + A VF+ + K G TY I++ C
Sbjct: 432 VKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIK-GYSVNAWTYNIMINGLC 490
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ A + +M+ G++P Y T+I +L +D+ + A K +EM+ G+
Sbjct: 491 KEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ ++ ++ L+D C V +A+ VF M + P SY I++ G G+ K
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM G PD V+Y +I+ C R A +L EM + +
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + +A+ + K +G +P TYN ++ C R+ +A + ++ G
Sbjct: 415 LIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
N TY+I+++ L K G EA + +M G P TYE ++R + + A
Sbjct: 475 YSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENN-GIIPDAVTYETIIRALFRKDENEKA 533
Query: 241 MRIWDEMKARGVLPVMH 257
++ EM RG+L H
Sbjct: 534 EKLLREMIIRGLLLCKH 550
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 143/311 (45%), Gaps = 3/311 (0%)
Query: 9 ELPDFNRLIDTLCKSR--HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+ +FN+++ ++ K+ H A + +++ + P I ++ IL+ + +
Sbjct: 56 SIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFS 115
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ ++ G+ P +++ +IN C + EA+ + A + TLINGL
Sbjct: 116 IFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLC 175
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
ALQ + + + + YN ++ + C ++DAY++ EM I P+
Sbjct: 176 KIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVV 235
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T++ ++ G+ +EA+ +F M K P V T+ I+V C + + A +
Sbjct: 236 TFNSLILGFCVVGQLKEAFGLFHEMVLK-NINPDVYTFSILVDALCKDGNITRAKNMLAV 294
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M +GV+P + YS+L++ C ++++ A F M +G+ P ++ + L M
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354
Query: 307 EETAVVLAQKI 317
+ A+ L +++
Sbjct: 355 VDEALSLFKEM 365
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 183 PNTRTYDIVLHHLIKAGRTE--EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ ++ +L ++KA A S+ ++ K G PT+ T+ I+V +C+ ++ A
Sbjct: 55 PSIVEFNKILGSIVKANNNHYTTAISLSHQLELK-GITPTIVTFNILVNCYCHLGEMTFA 113
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I+ ++ G P ++TLIN +C KL +A + ++ +G + L
Sbjct: 114 FSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLING 173
Query: 301 LRDEGMEETAVVLAQKID-KLRKTPLV 326
L G A+ + +KI+ KL T +V
Sbjct: 174 LCKIGETRAALQMLKKIEGKLVNTDVV 200
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +P +N LID CK VE AQE+ D M +P+ ++Y L+ G+ ++KN+
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRA 198
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M + P VV+Y +I+ C D A L M P + I+
Sbjct: 199 MALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDT 258
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R+ EA F K++G + Y A++ YC + +++DA ++D M PN
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN 318
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY+ ++ L K + +EA + + M +K G + TV TY I++ D A RI
Sbjct: 319 SSTYNALIDGLCKERKVQEALLLMESMIQK-GLKCTVPTYTILIVAMLKEGDFDYAHRIL 377
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M + G P +++Y+ I++ C + +A M + G+ P ++ + A
Sbjct: 378 DQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGL 437
Query: 305 GMEETA 310
G+ A
Sbjct: 438 GLLNPA 443
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 140/293 (47%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++ L +S A +F +M++R +P+I +YT+++ ++ L + EM
Sbjct: 77 YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P V +Y +I+ +C + A E+ M + +C P+ + LI G +K +
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+ + + P TYN+++ C ++ AYR+++ M + G+ P+ TY + +
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR EEA +F + K G + Y ++ +C ++D A + D M
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEK-GIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDC 315
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LP Y+ LI+ LC E K+ +A + M+ G++ ++ L A+ EG
Sbjct: 316 LPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEG 368
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 149/342 (43%), Gaps = 30/342 (8%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + LID CK+ ++ A + D+M P+ +Y L++G +++ +
Sbjct: 279 GIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEA 338
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M G + V +Y I+I A +D A + +M ++ +P +I+ I+
Sbjct: 339 LLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHA 398
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + EA +RG P+A TY V+ AY +N A+ ++ M G P+
Sbjct: 399 FCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPS 458
Query: 185 TRTYDIVLHHLIKAGRT-----------------------------EEAYSVFKRMSRKP 215
TY ++ HL+K T E A +F++M +
Sbjct: 459 HHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKM-LEH 517
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P ++TY ++ C ++ +A +++D M RGV P +Y++L+N C DA
Sbjct: 518 GCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDA 577
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ M++ G P + + L L +EG +E A V+ +
Sbjct: 578 VRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNL 619
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 17/293 (5%)
Query: 51 LLEGWGQQKNLLSMN---------EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
++ G+ + NL+ N V+ M G + VSY +I+ C R DE +
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
+F++M +C P+ + +++ L R EA+ F + ++RG EP TY ++ A C
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
++ + R++DEM + G+ P+ TY+ ++ K G E A + M P
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS-CNPNE 179
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
TY ++ FC V AM + +M + P + Y++LI+ C LD A +
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239
Query: 282 MLDIGIRPPGQLFSNLKQALRDEGMEETAVVL-------AQKIDKLRKTPLVD 327
M + G+ P +S L +G E A VL K +++ T L+D
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALID 292
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 154/356 (43%), Gaps = 30/356 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G+ + ++ IDTLCK +E A +F+ +K++ + YT L++G+ +
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ N + M + P+ +Y +I+ C ++ EA+ L M K + +
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + E A + Q G++P+ Y A + A+C I +A MM M + G
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR----------- 229
+ P+ TY +V+ G A+ V KRM G +P+ TY +++
Sbjct: 420 VMPDALTYTLVIDAYGGLGLLNPAFDVLKRMF-DTGCDPSHHTYSCLIKHLLKEELTKKY 478
Query: 230 ------------MFCYNAQV------DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
F A V + A+ ++++M G P ++ Y+ LI LC +
Sbjct: 479 KNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGR 538
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
L A K F M + G+ P ++++L + G+ AV L + + PL++
Sbjct: 539 LGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLE 594
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 121/291 (41%), Gaps = 30/291 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ + I C +++ A+++ M +R PD +YT++++ +G L
Sbjct: 384 GYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPA 443
Query: 65 NEVYREMKDDGFEPDVVSYGIMIN--------------AHCSA---------------KR 95
+V + M D G +P +Y +I A C + +
Sbjct: 444 FDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMK 503
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
++ A+ELF +M C P+ + + LI GL RL A + F +RG P YN+
Sbjct: 504 FETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNS 563
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ C DA R++ M + G P + +++ L + G E+A VF + +
Sbjct: 564 LLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCG 623
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ V+ ++I++ N D + M+ARG Y LI L
Sbjct: 624 YNDDEVA-WKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 154/290 (53%), Gaps = 4/290 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQK 59
M++FG+K++ N L+D L K VE A +VF + K +P ++ +L+ GW + +
Sbjct: 214 MERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNP--HTFNVLIHGWCKAR 271
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + + EMK+ GF PDV+SY ++ A+C K + + + EME C P+ +
Sbjct: 272 KMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYT 331
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+++ LG K +S+AL+ + + K P+ Y++++ + R+ DA + ++M K
Sbjct: 332 IVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQ 391
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ TY+ ++ + E+A + +M + +P ++TY +++M C N ++ +
Sbjct: 392 GAIPDVLTYNTMISAACMHSQEEDALKLLLKM-EESSCKPDLNTYSPLLKMCCRNNRMKV 450
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + M + + YS L++ LC KL+ AC +F+EM+ G+ P
Sbjct: 451 LSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVP 500
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 98/213 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + + ++ L K + + +A EV++KMK PD Y+ L+ +
Sbjct: 318 MEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGR 377
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +V+ +M G PDV++Y MI+A C + ++A++L +ME ++CKP + +
Sbjct: 378 LKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSP 437
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ R+ K E TY+ +V C S ++ A +EM G
Sbjct: 438 LLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKG 497
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
+ P T+ ++L L K E V K MS+
Sbjct: 498 LVPKDCTHKLLLKELEKKSMVEAKERVEKLMSQ 530
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 114/284 (40%), Gaps = 35/284 (12%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G+ + SY M++ K++D EL EM+ S ++ L R +A
Sbjct: 148 GYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDA 207
Query: 135 LQFFGQSKKRGFEPEA----------------------------------PTYNAVVGAY 160
++ F ++ G + + T+N ++ +
Sbjct: 208 IEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGW 267
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C + ++++A + M EM++ G P+ +Y ++ + + SV M K G P
Sbjct: 268 CKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEK-GCPPN 326
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V TY IV+ ++ A+ ++++MK +P YS+LI L +L DA F+
Sbjct: 327 VVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFE 386
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+M G P ++ + A EE A+ L K+++ P
Sbjct: 387 DMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKP 430
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 134 ALQFFGQSKKR-GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A FF +K + G+ +YN++V + + + +++EM + G + T V+
Sbjct: 136 AFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVM 195
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L +A R ++A F+ M R + T++ ++ + N+ V+ A ++ E K +
Sbjct: 196 RRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENS-VEHANDVFVEFK-DSI 253
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
L H ++ LI+ C K+D+A K EM + G P ++++ +A
Sbjct: 254 LLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEA 301
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 159/314 (50%), Gaps = 3/314 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ GL+ F+ +I LCK + VF+ M ++ P++ YT+L++G+ + +
Sbjct: 318 MDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGS 377
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M D+GF PDVV+Y +++N C R +EA++ F+ + + +
Sbjct: 378 VEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSS 437
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC- 179
LI+GLG R+ EA + F + ++G ++ YNA++ A+ ++++A + M +
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEE 497
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G TY I++ + K R EEA ++ M K G PT + + C + +V
Sbjct: 498 GCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDK-GITPTAACLRALSTGLCLSGKVAR 556
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A +I DE+ GV+ + +IN+LC ++ +ACK + + G PG++ + +
Sbjct: 557 ACKILDELAPMGVI-LDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMIN 615
Query: 300 ALRDEGMEETAVVL 313
ALR G + A+ L
Sbjct: 616 ALRKVGKADLAMKL 629
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 137/282 (48%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L +N L++ L + V+ A+ VF+ M+ R PD+ +Y +++G+ +
Sbjct: 213 MKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQ 272
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E R M+ G E D ++Y MI A + + V L++EM+ + PH F
Sbjct: 273 TQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSL 332
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL E +L+E F ++G +P Y ++ Y + + DA R++ M G
Sbjct: 333 VIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEG 392
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY +V++ L K GR EEA F+ R G Y ++ +VD A
Sbjct: 393 FNPDVVTYSVVVNGLCKNGRVEEAMDYFQ-TCRFNGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
R+++EM +G + Y+ LI++ K+D+A F+ M
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRM 493
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 1/317 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
KF + N LI + K VE V+ KMK+ +P + +Y L+ G +
Sbjct: 180 KFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVD 239
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
S V+ M+ +PDVV+Y MI +C A + +A+E R ME + + T+I
Sbjct: 240 SAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMI 299
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
++ S + + + ++G + ++ V+G C ++N+ Y + + M + G
Sbjct: 300 QACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSK 359
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN Y +++ K G E+A + RM + G P V TY +VV C N +V+ AM
Sbjct: 360 PNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDE-GFNPDVVTYSVVVNGLCKNGRVEEAMD 418
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ + G+ YS+LI+ L ++D+A + F+EM + G ++ L A
Sbjct: 419 YFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 303 DEGMEETAVVLAQKIDK 319
G + A+ L +++++
Sbjct: 479 KHGKVDEALALFKRMEE 495
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 141/290 (48%), Gaps = 1/290 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+D L ++ V+R + + +++K F + L++ +G+ + + V+R+MK++G
Sbjct: 158 LVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENG 217
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
EP + +Y ++N SA D A +F ME+ KP + T+I G + +AL
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKAL 277
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + +G E + TY ++ A + + EM + G+ + +V+ L
Sbjct: 278 EKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGL 337
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G+ E Y+VF+ M RK G++P V+ Y +++ + V+ A+R+ M G P
Sbjct: 338 CKEGKLNEGYAVFENMIRK-GSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPD 396
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ YS ++N LC ++++A YFQ G+ +S+L L G
Sbjct: 397 VVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAG 446
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I+ LCK E A + KM++ + Y +++ + + + ++ EM
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PDV++Y MI++ C + R+ +A +L R+M P F LIN L E ++S
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + +G +RG P TYN+++ +C R+NDA RM+D M P+ T+ ++
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KA R + +F M R+ TV TY ++ FC +D A + + M + GV
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTV-TYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P + +++ SLC + +L A +++
Sbjct: 283 APNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ +K + +N +ID LCK H AQ +F +M + PD+ +Y+ +++ + +
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ R+M + PDVV++ +INA + EA E++ +M P+ + +
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + RL++A + + P+ T++ ++ YC + R+++ + EM + G
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I NT TY ++H + G + A + M G P T++ ++ C ++ A
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI-SSGVAPNYITFQSMLASLCSKKELRKA 305
Query: 241 MRIWDEMKARGVLP 254
I ++++ V P
Sbjct: 306 FAILEDLQKSEVCP 319
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 136/316 (43%), Gaps = 38/316 (12%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
PD+ ++T L+ G + +L + M ++G +P YG +IN C + A+ L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
+ME T+ K I+ +I+ L + A F + +G P+ TY+ ++ ++C
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK---PGT-- 217
S R DA +++ +M + I P+ T+ +++ L+K G+ EA ++ M R+ P T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 218 -----------------------------EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
P V T+ ++ +C +VD M I+ EM
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
RG++ Y+TLI+ C LD A M+ G+ P F ++ +L +
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303
Query: 309 TAVVLAQKIDKLRKTP 324
A + + + K P
Sbjct: 304 KAFAILEDLQKSEVCP 319
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 160/343 (46%), Gaps = 23/343 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G++ +L N LI+ C + V K+ KR + PD + L++G GQ K
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKA 148
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L ++ ++ GF+ + VSYG +IN C A++L ++++ KP+ ++ T+
Sbjct: 149 LHFHD---KLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTI 205
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ L + +SEA F + +G + TY+ ++ +C ++ +A +++EM I
Sbjct: 206 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTI 265
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY+I++ L K G+ +EA SV M K +P V TY ++ + +V A
Sbjct: 266 NPNVYTYNILVDALCKEGKVKEAKSVLAVM-LKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+++ M GV P +H Y+ LIN C +D+A F+EM + P +S+L L
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGL 384
Query: 302 ----------------RDEGMEETAVVLAQKIDKLRKTPLVDR 328
D G + + ID L K +DR
Sbjct: 385 CKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDR 427
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 130/259 (50%), Gaps = 1/259 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D LCK V+ A+ V M K PD+ +Y+ L++G+ + V+ M
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV +Y I+IN C K DEA+ LF+EM N P + +LI+GL R+
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP 391
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ RG TY++++ C + ++ A + ++M+ GI PNT T+ I+L
Sbjct: 392 YVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILL 451
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR ++A VF+ + K G V TY +++ C ++ A+ + +M+ G
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTK-GYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGC 510
Query: 253 LPVMHMYSTLINSLCHEDK 271
+P + +I +L +D+
Sbjct: 511 IPDAVTFEIIIIALFKKDE 529
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 140/302 (46%), Gaps = 3/302 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ LI C ++ A + ++M + +P++ +Y IL++ ++ +
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V M +PDV++Y +++ + +A +F M P H + LING
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + EAL F + ++ P TY++++ C S RI + ++DEM G N
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPAN 408
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L K G + A ++F +M + G P T+ I++ C ++ A ++
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKM-KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVF 467
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL--R 302
++ +G ++ Y+ +I+ C + L++A +M D G P F + AL +
Sbjct: 468 QDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKK 527
Query: 303 DE 304
DE
Sbjct: 528 DE 529
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 125/251 (49%), Gaps = 3/251 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ +L N LI+ C + + K+ KR + PD ++T L+ G + +
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ GF+ + VSYG +IN C A++L R+++ KP ++ T+I+
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +S+A F + +G + TYN ++ +C ++ +A ++++M I PN
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135
Query: 185 TRTYDIVLHHLIKAGR--TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
RTY+I++ L K G+ +E+ S+ +M G + T+EI++ + D +
Sbjct: 1136 VRTYNILVDALCKEGKDLLDESLSMLSKMEDN-GCKANAVTFEIIISALFEKDENDKVEK 1194
Query: 243 IWDEMKARGVL 253
+ EM ARG+L
Sbjct: 1195 LLHEMIARGLL 1205
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 136/304 (44%), Gaps = 10/304 (3%)
Query: 3 KFGLKQELPDFNRLIDTLCKS---------RHVERAQEVFDKMKKRRFDPDIKSYTILLE 53
+F + +P+F+ + S ++V+ A F++M R P I + +L+
Sbjct: 8 RFSVSLSIPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILD 67
Query: 54 GWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
+ + K+ + + ++ G +PD+++ I+IN C + + ++ P
Sbjct: 68 SFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPP 127
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
TLI GL + ++ +AL F + +GF+ +Y ++ C A +++
Sbjct: 128 DTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLL 187
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
++ PN Y ++ L K EAY +F M+ K G V TY ++ FC
Sbjct: 188 QKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVK-GISADVVTYSTLIYGFCI 246
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
++ A+ + +EM + + P ++ Y+ L+++LC E K+ +A ML ++P
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306
Query: 294 FSNL 297
+S L
Sbjct: 307 YSTL 310
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ + LI+ CK++ V+ A +F +M ++ P I +Y+ L++G +
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ EM D G +V++Y +I+ C D A+ LF +M+ +P+ F
Sbjct: 390 IPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTI 449
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL RL +A + F +G+ TYN ++ +C + +A M+ +M G
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG 509
Query: 181 IGPNTRTYDIVLHHLIK----AGRTEEAYSVFKRMSRKPGTEPTVS 222
P+ T++I++ L K G V++ + K G P+++
Sbjct: 510 CIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSIT 555
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 1/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K +K ++ ++ L+D V++AQ VF+ M PD+ +YTIL+ G+ + K
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++EM P +V+Y +I+ C + R +L EM + + +
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSS 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L A+ F + K +G P T+ ++ C R+ DA + ++ G
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
N TY++++ K G EEA ++ +M G P T+EI++
Sbjct: 475 YHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDN-GCIPDAVTFEIII 521
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 2/238 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P ++ + ++++ K Y AV L +E +P LIN +++
Sbjct: 57 PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ KRG+ P+ T N ++ C ++ A D++ G N +Y +++ + K
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G T A + +++ + T+P V Y ++ C V A ++ EM +G+ +
Sbjct: 177 IGDTRAAIKLLQKIDGRL-TKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVV 235
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLA 314
YSTLI C E KL +A EM+ I P ++ L AL EG ++E VLA
Sbjct: 236 TYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLA 293
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 121/266 (45%), Gaps = 3/266 (1%)
Query: 24 RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+H A + +++ + PD+ + IL+ + + + ++ G+ PD +++
Sbjct: 940 KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
+IN C + ++A+ ++ A + + + TLING+ A++ +
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
R +P+ YN ++ A C ++ AY + EM GI + TY+ +++ G+ +E
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ--VDMAMRIWDEMKARGVLPVMHMYST 261
A + +M K P V TY I+V C + +D ++ + +M+ G +
Sbjct: 1120 AIGLLNKMVLKT-INPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGI 287
+I++L +D+ D K EM+ G+
Sbjct: 1179 IISALFEKDENDKVEKLLHEMIARGL 1204
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 5/246 (2%)
Query: 77 EPDVVSYGIMINA-HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
E V S G I H K Y AV L +E +P LIN +++
Sbjct: 922 ERGVTSVGAYIRIPHNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNF 981
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ KRG+ P+ T+ ++ C ++N A D++ G N +Y +++ +
Sbjct: 982 SILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGV 1041
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G T A + +++ + T+P V Y ++ C + V A ++ EM +G+
Sbjct: 1042 CKIGDTRAAIKLLRKIDGRL-TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISAD 1100
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG---MEETAVV 312
+ Y+TLI C KL +A +M+ I P + ++ L AL EG ++E+ +
Sbjct: 1101 VVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSM 1160
Query: 313 LAQKID 318
L++ D
Sbjct: 1161 LSKMED 1166
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ-K 59
M+ G+ ++ +N LI C ++ A + +KM + +P++++Y IL++ ++ K
Sbjct: 1092 MNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGK 1151
Query: 60 NLLSMN-EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA 108
+LL + + +M+D+G + + V++ I+I+A D+ +L EM A
Sbjct: 1152 DLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIA 1201
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 148/286 (51%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+K ++ FN L+ LC++ V A + ++M PD ++T L++G+ ++ +
Sbjct: 176 MGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGS 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + V M + G P V+ ++IN +C R ++A+ ++ A +P + T
Sbjct: 236 IKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNT 295
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+NGL + AL+ + G +P+ TYN VV C + ++ +A ++++M + G
Sbjct: 296 FVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERG 355
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++ ++ L R EEA + ++++ K G P V T+ I++ C +A
Sbjct: 356 CLPDITTFNTLIVALCSGNRLEEALDLARQVTLK-GLSPDVYTFNILINALCKVGDPQLA 414
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+R+++EMK+ G P Y+TLI++LC KL A +EM G
Sbjct: 415 LRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG 460
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ LCK+ +E A+ + ++M +R PDI ++ L+ L ++ R++
Sbjct: 328 YNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVT 387
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV ++ I+INA C A+ LF EM+++ C P + TLI+ L S +L
Sbjct: 388 LKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLG 447
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL + + G TYN ++ C MRI +A + D+M GI N T++ ++
Sbjct: 448 KALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 507
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K R ++A + +M + G +P TY ++ +C + A I M A G
Sbjct: 508 DGLCKDKRIDDANQLISQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGF 566
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ Y TLIN LC + A K + M G+R + ++ + Q+L
Sbjct: 567 EVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSL 615
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 154/338 (45%), Gaps = 40/338 (11%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD FN LI LC +E A ++ ++ + PD+ ++ IL+ + +
Sbjct: 357 LPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALR 416
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ EMK G PD V+Y +I+ CS + +A++L +EME+ C S + T+I+GL
Sbjct: 417 LFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLC 476
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ R+ EA + F Q +G A T+N ++ C RI+DA +++ +M G+ PN
Sbjct: 477 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNI 536
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ +L H K G ++A + + M+ G E V TY ++ C + +A+++
Sbjct: 537 TYNSILTHYCKQGDIKKAADILQTMTAN-GFEVDVVTYGTLINGLCKAGRTQVALKLLRG 595
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM------------------------ 282
M+ +G+ Y+ +I SL + DA F+EM
Sbjct: 596 MRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGG 655
Query: 283 ------------LDIGIRPPGQLFSNLKQALRDEGMEE 308
+D G P F L + L + GM++
Sbjct: 656 SIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDD 693
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 3/322 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N ++ LC++ HV A +V D M + DPD+ +Y I++ + L
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 344
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M + G PD+ ++ +I A CS R +EA++L R++ P + F LIN
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINA 404
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L AL+ F + K G P+ TYN ++ C ++ A ++ EM G +
Sbjct: 405 LCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRS 464
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+ ++ L K R EEA VF +M + G T+ ++ C + ++D A ++
Sbjct: 465 TVTYNTIIDGLCKKMRIEEAEEVFDQMDLQ-GISRNAITFNTLIDGLCKDKRIDDANQLI 523
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M + G+ P Y++++ C + + A Q M G + L L
Sbjct: 524 SQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKA 583
Query: 305 GMEETAVVL--AQKIDKLRKTP 324
G + A+ L +I +R TP
Sbjct: 584 GRTQVALKLLRGMRIKGMRATP 605
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FG++ + +N L++ L + ++ + V+ +M +R PD+ ++ L++ + + +
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRT 203
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ EM G PD ++ ++ A+ + M C P+ LIN
Sbjct: 204 AVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLIN 263
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G R+ +AL + Q GFEP+ TYN V C + + A ++MD M + G P
Sbjct: 264 GYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP 323
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY+IV++ L K G+ EEA + +M + G P ++T+ ++ C +++ A+ +
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVER-GCLPDITTFNTLIVALCSGNRLEEALDL 382
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++ +G+ P ++ ++ LIN+LC A + F+EM G P ++ L
Sbjct: 383 ARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTL 436
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 2/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + +N +ID LCK +E A+EVFD+M + + ++ L++G + K
Sbjct: 456 MESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKR 515
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ N++ +M +G +P+ ++Y ++ +C +A ++ + M A + + T
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL R AL+ + +G YN V+ + DA + EM + G
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVG 635
Query: 181 IGPNTRTYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIV 227
P+ TY IV L + G + EA+ M K G P S++ ++
Sbjct: 636 EPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDK-GFIPEFSSFRML 682
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 124/278 (44%), Gaps = 5/278 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID LC + +A ++ +M+ +Y +++G ++ + EV+ +M
Sbjct: 433 YNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMD 492
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + +++ +I+ C KR D+A +L +M + +P+ + +++ + +
Sbjct: 493 LQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIK 552
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A GFE + TY ++ C + R A +++ MR G+ + Y+ V+
Sbjct: 553 KAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVI 612
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY-NAQVDMAMRIWDEMKARG 251
L + T +A ++F+ M+ + G P TY+IV R C + A EM +G
Sbjct: 613 QSLFRRNNTRDAMNLFREMT-EVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKG 671
Query: 252 VLPVMHMYSTLINSLCH---EDKLDDACKYFQEMLDIG 286
+P + L L + +D A + E D+G
Sbjct: 672 FIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIEKADLG 709
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 53/109 (48%)
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G + Y ++ + +++ + ++ EM RG+ P + ++TL+ +LC ++ A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+EM G+ P F+ L Q +EG + A+ + ++ ++ +P
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSP 253
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 154/305 (50%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG ++ +N +I+ + VE+A +F +M + P++ +YT +++G + +
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+++M D G +PD +Y +I+ + S ++ E V++ EM +P +
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L R EA FF ++G +P+ Y ++ Y +++ + +D M G
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN R ++I+ K EEA +F +M R+ G P V ++ ++ C +VD A
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM-RQQGLSPDVVSFGALIDALCKLGRVDDA 390
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +++M GV P + ++S+L+ LC K + A + F E+LD GI F+ L
Sbjct: 391 VLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCN 450
Query: 301 LRDEG 305
L +EG
Sbjct: 451 LCNEG 455
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 151/309 (48%), Gaps = 2/309 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFD-KMKKRRFDPDIKSYTILLEGWGQQKNL 61
K G + + ++L+ LC ++ V+ A ++ +M + PD+ +Y ++ G+ ++ +
Sbjct: 118 KTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQV 177
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
++ EM D G P+VV+Y +I+ C A+ D A +F++M KP + L
Sbjct: 178 EKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCL 237
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+G S + E +Q + G EP+ TY ++ C + R +A D M + GI
Sbjct: 238 IHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGI 297
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ Y I+LH G E +S M G P + I+ + A ++ AM
Sbjct: 298 KPDVAIYAILLHGYATKGALSEMHSFLDLMVGN-GVSPNRRIFNIMFCAYAKKAMIEEAM 356
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I+++M+ +G+ P + + LI++LC ++DDA F +M++ G+ P +FS+L L
Sbjct: 357 HIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGL 416
Query: 302 RDEGMEETA 310
G E A
Sbjct: 417 CTVGKWEKA 425
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 163/394 (41%), Gaps = 71/394 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ + + L+D LCK+ A+ FD M ++ PD+ Y ILL G+ +
Sbjct: 257 MSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGA 316
Query: 61 LLSMNE-----------------------------------VYREMKDDGFEPDVVSYGI 85
L M+ ++ +M+ G PDVVS+G
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGA 376
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS------------------ 127
+I+A C R D+AV F +M P+ +F +L+ GL +
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436
Query: 128 -----------------EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
E R+ EA + + G P +YN +V +C + RI++A
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+++D M G+ PN TY I+L KA R ++AYS+F+ M K G P V+TY ++
Sbjct: 497 KLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMK-GVTPVVATYNTILHG 555
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A ++ M ++ Y+ ++N LC + +D+A K F+ + +
Sbjct: 556 LFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLD 615
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+ + AL G +E A+ L I P
Sbjct: 616 SVTFNIMIGALLKGGRKEDAMDLFATISAYGLVP 649
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 147/292 (50%), Gaps = 8/292 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
MD+ G+ + + +ID LCK++ V+RA+ VF +M R PD +Y L+ G+ G+
Sbjct: 188 MDQ-GIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGK 246
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K ++ M E EM G EPD ++Y ++++ C R EA F M KP I
Sbjct: 247 WKEVVQMLE---EMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAI 303
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L++G ++ LSE F G P +N + AY I +A + ++MR
Sbjct: 304 YAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMR 363
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ G+ P+ ++ ++ L K GR ++A F +M + G P + + +V C +
Sbjct: 364 QQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINE-GVTPNIFVFSSLVYGLCTVGKW 422
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ A ++ E+ +G+ ++TL+ +LC+E ++ +A + M+ +G+RP
Sbjct: 423 EKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRP 474
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 5/272 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ LC V AQ + D M + P++ SY L+ G + ++ M
Sbjct: 444 FNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMV 503
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G +P+ +Y I++ +C A+R D+A LFREM P + T+++GL R S
Sbjct: 504 SNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFS 563
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP--NTRTYDI 190
EA + + + + TYN ++ C + +++A++M R C P ++ T++I
Sbjct: 564 EANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFR--RLCSKDPQLDSVTFNI 621
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L+K GR E+A +F +S G P V TY ++ + ++ M+
Sbjct: 622 MIGALLKGGRKEDAMDLFATIS-AYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKS 680
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
G P HM + L+ L H + A Y ++
Sbjct: 681 GTAPNSHMLNALVRRLLHRGDISRAGVYLYKL 712
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 147/319 (46%), Gaps = 8/319 (2%)
Query: 13 FNRLIDTLCK---SRHVERAQEVFDKMKKR---RFDPDIKSYTILLEGWGQQKNLLSMNE 66
FN+L+ + + S ER +F +M + + P+ +Y+IL+ + + L
Sbjct: 52 FNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFA 111
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE-LFREMEATNCKPSPHIFCTLINGL 125
+ + G+ +V+ ++ C AKR DEA + L M C P + T+ING
Sbjct: 112 AFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGF 171
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
E ++ +A F + +G P TY V+ C + ++ A + +M G+ P+
Sbjct: 172 FREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDN 231
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ ++H + G+ +E + + MS G EP TY +++ C N + A +D
Sbjct: 232 GTYNCLIHGYLSTGKWKEVVQMLEEMSTH-GLEPDCITYALLLDYLCKNGRCREARLFFD 290
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M +G+ P + +Y+ L++ + L + + M+ G+ P ++F+ + A +
Sbjct: 291 SMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKA 350
Query: 306 MEETAVVLAQKIDKLRKTP 324
M E A+ + K+ + +P
Sbjct: 351 MIEEAMHIFNKMRQQGLSP 369
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + +N L+ C + ++ A ++ D M P+ +YTILL G+ + +
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++REM G P V +Y +++ R+ EA EL+ M + K + +
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNI 586
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + EA + F + + + ++ T+N ++GA R DA + + G
Sbjct: 587 ILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYG 646
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ +LI+ G E +F M K GT P +VR + + A
Sbjct: 647 LVPDVVTYRLIAENLIEEGSLGEFDGLFSAM-EKSGTAPNSHMLNALVRRLLHRGDISRA 705
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 6/215 (2%)
Query: 97 DEAVELFREMEATNCKPSPHIF---CTLINGLGSEKRLSEALQFFGQSKKR---GFEPEA 150
DEA++LF E+ S F T+++ G + F + + P A
Sbjct: 31 DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
TY+ ++G +C R+ + + K G N +L L A R +EA +
Sbjct: 91 CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
+ G P V Y V+ F QV+ A ++ EM +G+ P + Y+T+I+ LC
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+D A FQ+M+D G++P ++ L G
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTG 245
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG---RTEEAYSVFKRMSRKPGTE- 218
S+ +++A ++ DE+ C + R ++ +L + +AG +E S+F RM+R+ ++
Sbjct: 27 SLGLDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKV 86
Query: 219 -PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P TY I++ FC +++ + + G + + S L+ LC ++D+A
Sbjct: 87 APNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATD 146
Query: 278 -YFQEMLDIGIRP--------------PGQL--FSNLKQALRDEGMEETAVVLAQKIDKL 320
M + G P GQ+ NL + D+G+ V ID L
Sbjct: 147 ILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGL 206
Query: 321 RKTPLVDRGQ 330
K +VDR +
Sbjct: 207 CKAQVVDRAK 216
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTI------LLEGWGQQKN 60
K ++ +N +++ LCK+ V+ A ++F ++ + DP + S T LL+G G++++
Sbjct: 578 KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK--DPQLDSVTFNIMIGALLKG-GRKED 634
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ + G PDVV+Y ++ E LF ME + P+ H+
Sbjct: 635 AM---DLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNA 691
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
L+ L +S A + + ++ F EA T + ++ Y
Sbjct: 692 LVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLY 731
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 158/314 (50%), Gaps = 3/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L D C+ ++ A ++ ++M+K P++ + ++ G + + + + +RE +
Sbjct: 243 YNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKR 302
Query: 73 DDGFEP--DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
E + V+Y +++A A+ELF EM P ++ T+I+GL R
Sbjct: 303 TTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGR 362
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L +A KK GF+ + YN ++G +C R+++A+++ +EM+ G+ P+ TY+
Sbjct: 363 LVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNT 422
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L L KAG + M G +P+V T+ +V +C + D A++I+ M
Sbjct: 423 LLSCLCKAGDFSAVDELLGNMIDD-GCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEA 481
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ P +Y+TLI+ LC ++D A K F EM + + ++ L + L+D+ M E A
Sbjct: 482 RIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKA 541
Query: 311 VVLAQKIDKLRKTP 324
L ++ + R TP
Sbjct: 542 FELMDQMKEERCTP 555
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 135/284 (47%), Gaps = 3/284 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDP--DIKSYTILLEGWGQQ 58
M+K G+ + N ++ LC+ V A + F + + + + +Y+ L+ +
Sbjct: 266 MEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHC 325
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
N+ E++ EM D G+ PD V Y MI+ A R +A + M+ K +
Sbjct: 326 NNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAY 385
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LI G +KRL EA Q F + K G +P+ TYN ++ C + + ++ M
Sbjct: 386 NILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMID 445
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G P+ T+ ++H KAG+T+EA +F+ M + +P Y ++ C + +VD
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMG-EARIQPNTVIYNTLIDFLCKSREVD 504
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+A++++DEM+ V + Y+ L+ L ++ + A + +M
Sbjct: 505 VAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQM 548
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 7/272 (2%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
S + A + D + PD+ ++ LL G+ NL M E++ M++ +PD+V+
Sbjct: 109 SSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVT 168
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC--TLINGLGSEKRLSEALQFFGQ 140
YGI++N C A +A+++ M + I T+++GL RL +A+ F +
Sbjct: 169 YGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDE 228
Query: 141 SKKR--GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
++ G P TYN + A C I+ A ++++ M K G+ PN T + ++ L +
Sbjct: 229 RMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRV 288
Query: 199 GRTEEAYSVFKRMSRKPGTEP--TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
GR A F R R E TY +V F + V +AM ++ EM +G P
Sbjct: 289 GRVGAALDFF-REKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDA 347
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
MY T+I+ L +L DAC M G +
Sbjct: 348 VMYFTMISGLTQAGRLVDACNIAASMKKAGFK 379
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 115/221 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K + +N LI C+ + + A ++F++MK PD+ +Y LL + +
Sbjct: 373 MKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGD 432
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++E+ M DDG +P VV++G +++ +C A + DEA+++FR M +P+ I+ T
Sbjct: 433 FSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNT 492
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + + A++ F + ++ TYNA++ A+ +MD+M++
Sbjct: 493 LIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEER 552
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
P+ T D+++ L + G TE ++ K G + T+
Sbjct: 553 CTPDYVTMDVLMEWLPEIGETERLKCFMEQRDEKGGAKLTM 593
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 148/367 (40%), Gaps = 45/367 (12%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLE----- 53
D PD FN L+ L ++ ++ E+F M++ PDI +Y ILL
Sbjct: 120 DSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKA 179
Query: 54 ----------------GWGQQKNLLSMNEVY------------------REMKDDGFEPD 79
G +++ +N V R + G P+
Sbjct: 180 GLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPN 239
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
V+Y + +A C D A ++ ME P+ T++ GL R+ AL FF
Sbjct: 240 TVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFR 299
Query: 140 QSKKRGFEP--EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ + E A TY+ +V A+ + A + EM G P+ Y ++ L +
Sbjct: 300 EKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQ 359
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
AGR +A ++ M +K G + Y I++ FC ++ A ++++EMK G+ P ++
Sbjct: 360 AGRLVDACNIAASM-KKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVY 418
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
Y+TL++ LC + M+D G +P F L G + A+ + + +
Sbjct: 419 TYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSM 478
Query: 318 DKLRKTP 324
+ R P
Sbjct: 479 GEARIQP 485
>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 1/323 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
G++ + N +I+ LC+ + V V M K +P + + T L+ G Q N+
Sbjct: 104 SSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNV 163
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ M+ + DV +YG++IN C AV R+ME N KP+ ++ T+
Sbjct: 164 AQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTI 223
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++GL + +SEAL + +G P TY ++ C R +A ++DEM K G+
Sbjct: 224 MDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGM 283
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ + +I++ K G+ +A SV M G P V TY ++ ++C +++ AM
Sbjct: 284 RPDLQMLNILVDAFCKEGKVMQAKSVIGFMIL-TGEGPDVFTYNSLIHIYCLQNKMNEAM 342
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R++ M +RG LP + ++++LI+ C + ++ A +EM +G P ++ L
Sbjct: 343 RVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGF 402
Query: 302 RDEGMEETAVVLAQKIDKLRKTP 324
G A L + K + P
Sbjct: 403 CQAGRPLAAKELFLNMHKYGQVP 425
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 149/319 (46%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL+ + LI+ LC +V +A + D M+K + D+ +Y +L+ G + +
Sbjct: 138 MFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGD 197
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ R+M++ ++P+VV Y +++ C EA+ L EM +P+ +
Sbjct: 198 TLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYAC 257
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL + R EA + K G P+ N +V A+C ++ A ++ M G
Sbjct: 258 LIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTG 317
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
GP+ TY+ ++H + EA VF M + G P + + ++ +C + ++ A
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSR-GRLPDIVVFTSLIHGWCKDKNINKA 376
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + +EM G +P + ++TLI C + A + F M G P Q + +
Sbjct: 377 MHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDG 436
Query: 301 LRDEGMEETAVVLAQKIDK 319
L E + AV LA+ ++K
Sbjct: 437 LCKENLLSEAVSLAKAMEK 455
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 142/301 (47%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ L + LI LC + A + D+M K PD++ IL++ + ++
Sbjct: 243 MNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGK 302
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ V M G PDV +Y +I+ +C + +EA+ +F M + P +F +
Sbjct: 303 VMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTS 362
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +K +++A+ + K GF P+ T+ ++G +C + R A + M K G
Sbjct: 363 LIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYG 422
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +T ++L L K EA S+ K M K + + Y I++ C +++ A
Sbjct: 423 QVPNLQTCAVILDGLCKENLLSEAVSLAKAM-EKSNLDLNIVIYSILLDGMCSAGKLNAA 481
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +G+ +++Y+ +I LC + LD A M + G P ++ Q
Sbjct: 482 WELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQG 541
Query: 301 L 301
L
Sbjct: 542 L 542
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 147/345 (42%), Gaps = 36/345 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K ++ + LI+ LCK+ A KM++R + P++ Y+ +++G +
Sbjct: 173 MEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGL 232
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM G P++V+Y +I C+ R+ EA L EM +P +
Sbjct: 233 VSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNI 292
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR--------- 171
L++ E ++ +A G G P+ TYN+++ YC ++N+A R
Sbjct: 293 LVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG 352
Query: 172 --------------------------MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+++EM K G P+ T+ ++ +AGR A
Sbjct: 353 RLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAK 412
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F M K G P + T +++ C + A+ + M+ + + +YS L++
Sbjct: 413 ELFLNM-HKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDG 471
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+C KL+ A + F + G++ +++ + + L +G + A
Sbjct: 472 MCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKA 516
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 110/232 (47%), Gaps = 6/232 (2%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+ LPD F LI CK +++ +A + ++M K F PD+ ++T L+ G+ Q L+
Sbjct: 351 RGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLA 410
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E++ M G P++ + ++++ C EAV L + ME +N + I+ L++
Sbjct: 411 AKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLD 470
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G+ S +L+ A + F +G + Y ++ C ++ A ++ M + G P
Sbjct: 471 GMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLP 530
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSV-FKRMSRKPGTEPTVSTYEIVVRMFCYN 234
N TY++ + L+ + E A S+ + + R G +T E ++ N
Sbjct: 531 NNCTYNVFVQGLLT--KKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTN 580
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 4/260 (1%)
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPS 114
G+ KN+ ++++ M P V + +++ A K Y A+ L + M + +
Sbjct: 52 GKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEAD 111
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+IN L K ++ G K G EP T ++ C + A + D
Sbjct: 112 TITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLAD 171
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M K + TY ++++ L K G T A ++M + +P V Y ++ C +
Sbjct: 172 HMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEER-NWKPNVVVYSTIMDGLCKD 230
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
V A+ + EM +GV P + Y+ LI LC+ + +A EM+ +G+RP Q+
Sbjct: 231 GLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQML 290
Query: 295 SNLKQALRDEG--MEETAVV 312
+ L A EG M+ +V+
Sbjct: 291 NILVDAFCKEGKVMQAKSVI 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G L ++D LCK + A + M+K D +I Y+ILL+G
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGK 477
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E++ + G + +V Y IMI C D+A +L ME C P+ +
Sbjct: 478 LNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNV 537
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ GL ++K ++ ++++ + +GF +A T ++
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFII 574
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 90/195 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G ++ + LI C++ A+E+F M K P++++ ++L+G ++
Sbjct: 383 MSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENL 442
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + M+ + ++V Y I+++ CSA + + A ELF + + + +I+
Sbjct: 443 LSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTI 502
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL + L +A ++ G P TYN V I + + + MR G
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562
Query: 181 IGPNTRTYDIVLHHL 195
+ T + ++++L
Sbjct: 563 FSVDAATTEFIINYL 577
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Query: 161 CWSMR---INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
CWS + I++A + M + P+ + + ++L +++ A S+ K M G
Sbjct: 49 CWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGI 108
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
E T IV+ C V + M G+ P + +TLIN LC + + A
Sbjct: 109 EADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQA 166
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 144/296 (48%), Gaps = 5/296 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK V A+EV + P Y L+ G+ Q L + +MK
Sbjct: 209 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 268
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD ++Y +IN C A+R A +L EM+ P+ F TLI+ G +L +
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ ++ G +P +Y ++V A+C + +I +A ++D+M + PN + Y+ ++
Sbjct: 329 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 388
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
++ G ++A+ + ++M + G P++ TY ++++ C +Q+ A I + + ++P
Sbjct: 389 VEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 447
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGI----RPPGQLFSNLKQALRDEGME 307
Y+TLI++ C+ +D A Q M GI R QL S L A R ME
Sbjct: 448 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 503
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 152/320 (47%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +N L+ LC++ + + D+M ++ PD +Y+IL +G + + +M
Sbjct: 128 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 187
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ + +G + I++N C + A E+ + + P+ I+ TLING
Sbjct: 188 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 247
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A FGQ K R +P+ TYNA++ C + RI +A ++ EM+ G+ P
Sbjct: 248 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 307
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ + G+ E+ + V M ++ G +P V +Y +V FC N ++ A+ I
Sbjct: 308 VETFNTLIDAYGRTGQLEKCFIVLSEM-QENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 366
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M + VLP +Y+ +I++ D A ++M GI P ++ L + L ++
Sbjct: 367 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 426
Query: 305 GMEETAVVLAQKIDKLRKTP 324
A + + R P
Sbjct: 427 SQISEAEEIINSLSNHRLIP 446
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 36/349 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I + ++ A EVFD+M +R P+ +Y +++G + +L + + +M
Sbjct: 66 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+ ++Y ++++ C A R E L EM + P + L +GL
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185
Query: 133 EALQFFGQSKKRGFE-----------------------------------PEAPTYNAVV 157
L FG+ K G P YN ++
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + + A+ +M+ I P+ TY+ +++ L KA R A + M + G
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDNGV 304
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
PTV T+ ++ + Q++ + EM+ G+ P + Y +++N+ C K+ +A
Sbjct: 305 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 364
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+M + P Q+++ + A + G + A +L +K+ +P +
Sbjct: 365 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 413
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 136/305 (44%), Gaps = 36/305 (11%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K + +N LI+ LCK+ + AQ++ +M+ +P ++++ L++ +G+ L
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
V EM+++G +P+VVSYG ++NA C + EAV + +M
Sbjct: 329 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM------------------- 369
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ P A YNA++ AY + A+ ++++M+ GI P+
Sbjct: 370 ----------------FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 413
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY++++ L + EA + +S P +Y ++ CY +D A+ +
Sbjct: 414 VTYNLLIKGLCNQSQISEAEEIINSLSNHR-LIPDAVSYNTLISACCYRGNIDKALDLQQ 472
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M G+ + Y LI+ L +L++ +Q+M+ + P + + + +A G
Sbjct: 473 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 532
Query: 306 MEETA 310
E A
Sbjct: 533 NEIKA 537
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 141/347 (40%), Gaps = 37/347 (10%)
Query: 20 LCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP- 78
L RH + + F + PD ++ ++ +L + R M DG P
Sbjct: 3 LSLGRHAD-VRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
+ SY ++I A R +AVE+F EM P+ + T+I+G L +
Sbjct: 62 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA 198
Q G +P A TYN ++ C + R+ + ++DEM + P+ TY I+ L +
Sbjct: 122 DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 181
Query: 199 GRTEEAYSVFKRMSR----------------------------------KPGTEPTVSTY 224
G ++ S+F + + G PT Y
Sbjct: 182 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 241
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ +C +++ A + +MK+R + P Y+ LIN LC +++ +A EM D
Sbjct: 242 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 301
Query: 285 IGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTPLVDRGQ 330
G+ P + F+ L A G +E+ +VL++ + K +V G
Sbjct: 302 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 348
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + + +++ CK+ + A + D M + P+ + Y +++ + +
Sbjct: 334 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 393
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +MK +G P +V+Y ++I C+ + EA E
Sbjct: 394 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE------------------- 434
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN L + + + P+A +YN ++ A C+ I+ A + M K G
Sbjct: 435 IINSLSNHRLI----------------PDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 478
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
I RTY ++ L AGR E ++++M + P+ + + I+V +
Sbjct: 479 IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN-NVVPSNAIHNIMVEAY 528
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 1/264 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N LI L K V+ A E+ + M ++ PD ++Y I+++
Sbjct: 361 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 420
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ MK PDVV+Y ++N +R DEA +LF EM+A C P F T
Sbjct: 421 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGT 480
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ +AL+ + K G P + YNA++ +C S +++ Y + +M +C
Sbjct: 481 LIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 540
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P++ TY I++ + G T A + + M R+ G P ++TY +++R QV+ A
Sbjct: 541 CFPDSITYTILVLGFSRRGHTSMAMELLQEMVRE-GHTPALATYNVLIRSLSMAGQVEDA 599
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN 264
++ EM A+G P M YS L N
Sbjct: 600 YTLFKEMIAKGFNPDMQTYSALPN 623
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 147/329 (44%), Gaps = 40/329 (12%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K+ +PD +N LI LCKS+ +E A +F + ++ D+ +Y+ L++ +G+
Sbjct: 295 KESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAK 353
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
EV+ M+ G PD V Y ++I+ + DEA+EL +M P + +I+
Sbjct: 354 ALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVID 413
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L S R +A FFG K+R P+ TYN ++ R ++A + DEM+ P
Sbjct: 414 VLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMP 473
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD----- 238
+ T+ ++ L KAGR E+A R+ K G P Y ++ FC + QVD
Sbjct: 474 DLTTFGTLIDTLAKAGRMEDALEQSARLV-KMGHAPNSYIYNALISGFCRSGQVDKGYEL 532
Query: 239 ------------------------------MAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
MAM + EM G P + Y+ LI SL
Sbjct: 533 FQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSM 592
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+++DA F+EM+ G P Q +S L
Sbjct: 593 AGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 148/325 (45%), Gaps = 12/325 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG---WGQQKNL 61
GLK ++ N LI C+ + +A+ + M D +Y IL+ GQ +
Sbjct: 191 GLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEV 250
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS-PHIFC- 119
S E+ R DG V+Y +I R EA +LF E+T K S P +F
Sbjct: 251 ASFMELARH---DGCALSAVNYNFIIQGFIRCGRLAEATQLF---ESTMTKESVPDVFTY 304
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L+ L K+L EAL F ++++ G + TY+ ++ A+ + R A + M+K
Sbjct: 305 NLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKA 364
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+T Y++++ L K G+ +EA + + M+RK G P TY IV+ + + +
Sbjct: 365 GCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK-GIMPDCRTYNIVIDVLSSCGRYEK 423
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + MK R P + Y+TL+N L + D+AC F EM P F L
Sbjct: 424 AYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLID 483
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
L G E A+ + ++ K+ P
Sbjct: 484 TLAKAGRMEDALEQSARLVKMGHAP 508
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 150/314 (47%), Gaps = 7/314 (2%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNE 66
PD F + LC+ R VE+A +FD M++ PD+ +Y L+ G+ + + +
Sbjct: 87 PDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALD 146
Query: 67 VYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
++R +K +G +P+ VS+ ++ C R +A+ +F+EM K ++ TLI+
Sbjct: 147 MFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCT 206
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
L +A + +A TY +V A+C + ++++ M+ R G +
Sbjct: 207 CRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSA 266
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
Y+ ++ I+ GR EA +F+ K P V TY +++ + C + Q++ A+ ++
Sbjct: 267 VNYNFIIQGFIRCGRLAEATQLFESTMTKESV-PDVFTYNLLIAL-CKSKQLEEALTLFQ 324
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
E + GV+ + YS L+++ + A + F M G P +++ L L +G
Sbjct: 325 EAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQG 384
Query: 306 MEETAVVLAQKIDK 319
+ A+ L + +++
Sbjct: 385 KVDEALELLEDMNR 398
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 3/169 (1%)
Query: 117 IFCT-LINGLGSEKRLSEALQFFGQSKKRGF-EPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ CT I G L A+ ++ F +P+ + A + C R+ A + D
Sbjct: 54 VTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFD 113
Query: 175 EMRK-CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+MR+ C P+ Y+ ++ KAG + A +F+R+ ++ +P +++ +V C
Sbjct: 114 DMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCK 173
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ A+ ++ EM G+ +++ +TLI+ C L A + M
Sbjct: 174 MSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHM 222
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 2/166 (1%)
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL + K G +A T A+V C R ++ E+R+ G+G + T +
Sbjct: 2 ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR-GV 252
+AG + A + M R +P + + C +V+ AM ++D+M+
Sbjct: 62 AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG-IRPPGQLFSNL 297
P + Y+TLI C D A F+ + G +P F L
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTL 167
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 158/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ N ++ K +E A ++ +M + R + ++ I++ ++
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E M+ GF+P+VVSY +I+ + S + A + M +P + + +
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ E RL EA F + + G P A TYN ++ YC + A+ DEM K G
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY++++H L GR EA + K M RK G P TY I++ + A
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEM-RKKGIIPDAITYNILINGYSRCGNAKKA 421
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +EM ++G+ P Y++LI L +++ +A F+++LD G+ P +F+ +
Sbjct: 422 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDG 481
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
G E A +L +++D+ P
Sbjct: 482 HCANGNVERAFMLLKEMDRKSVPP 505
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 155/307 (50%), Gaps = 1/307 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +++ LCK +++A+E M+ F P++ SY ++ G+ + N+ + M+
Sbjct: 230 FNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR 289
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD +YG +I+ C R +EA LF +M P+ + TLI+G ++ L
Sbjct: 290 VKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLE 349
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + K+G P TYN +V A R+ +A M+ EMRK GI P+ TY+I++
Sbjct: 350 RAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILI 409
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + G ++A+ + M K G EPT TY ++ + ++ A +++++ +GV
Sbjct: 410 NGYSRCGNAKKAFDLHNEMLSK-GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + M++ +++ C ++ A +EM + P F+ L Q EG E A +
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528
Query: 313 LAQKIDK 319
L ++ +
Sbjct: 529 LLDEMKR 535
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL +N LID C +ERA D+M K+ P + +Y +L+ +
Sbjct: 323 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 382
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +EM+ G PD ++Y I+IN + +A +L EM + +P+ + +
Sbjct: 383 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 442
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L R+ EA F + +G P+ +NA+V +C + + A+ ++ EM +
Sbjct: 443 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 502
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T++ ++ + G+ EEA + M R+ G +P +Y ++ + + A
Sbjct: 503 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRR-GIKPDHISYNTLISGYGRRGDIKDA 561
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ DEM + G P + Y+ LI LC + D A + +EM++ GI P + +L +
Sbjct: 562 FRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621
Query: 301 L 301
+
Sbjct: 622 M 622
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ + + FN L+ C+ VE A+ + D+MK+R PD SY L+ G+G++ +
Sbjct: 498 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGD 557
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V EM GF P +++Y +I C + D A EL +EM P + +
Sbjct: 558 IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 617
Query: 121 LINGLGSEKRLSE 133
LI G+G+ L E
Sbjct: 618 LIEGMGNVDTLVE 630
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+D+++ + R +EA+ F M K G P + T ++ +F +++MA ++ E
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEK-GIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M + ++ ++ ++N LC E KL A ++ M +G +P ++ + G
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277
Query: 307 EETA 310
E A
Sbjct: 278 IEGA 281
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G L +N LI LCK++ + A+E+ +M + PD +Y L+EG G
Sbjct: 568 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDT 627
Query: 61 LLSMN 65
L+ N
Sbjct: 628 LVEDN 632
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 154/311 (49%), Gaps = 1/311 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N ++ KS E+A ++ +M + R + ++ I++ ++ L E M+
Sbjct: 160 NDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEA 219
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G +P+VV+Y +I+ +CS R + A +F M+ KP + + + I+G+ E +L E
Sbjct: 220 LGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEE 279
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + K+ G P A TYN ++ YC + A+ D+M + G+ P TY++++H
Sbjct: 280 ASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIH 339
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L + +EA + K MS K G P TY I++ +C V A + DEM ++G+
Sbjct: 340 ALFLDCKMDEADGIIKEMSEK-GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQ 398
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P Y++LI L ++ A F++++ GI P +F+ L G + A +
Sbjct: 399 PTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAM 458
Query: 314 AQKIDKLRKTP 324
+++D+++ P
Sbjct: 459 LKEMDQMKVVP 469
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + +N +I C VE A+ +FD MK R PD +Y + G ++
Sbjct: 217 MEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGK 276
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + +MK+ G P V+Y +I+ +C+ + A + +M P+ +
Sbjct: 277 LEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNM 336
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + ++ EA + ++G P++ TYN ++ YC + A+ + DEM G
Sbjct: 337 LIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKG 396
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY +++ L K GR ++A +F+++ RK G P + + ++ C N +D A
Sbjct: 397 IQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRK-GIFPDLIMFNALIDGHCANGNMDRA 455
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ EM V+P ++TL+ C E K++ A + +EM GI+P ++ L
Sbjct: 456 FAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISG 515
Query: 301 LRDEG 305
G
Sbjct: 516 YSKRG 520
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ +N LID C ++E A + DKM + P + +Y +L+
Sbjct: 287 MKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK 346
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +EM + G PD V+Y I+IN +C +A L EM + +P+ + +
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTS 406
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L R+ +A F + ++G P+ +NA++ +C + ++ A+ M+ EM +
Sbjct: 407 LIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK 466
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T++ ++ + G+ E A + + M + G +P +Y ++ + + A
Sbjct: 467 VVPDEVTFNTLMQGRCREGKVEAARELIEEMKSR-GIKPDHISYNTLISGYSKRGDMKDA 525
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ DEM + G P + Y+ LI LC ++ D A + +EM+ GI P + +L +
Sbjct: 526 FRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585
Query: 301 L 301
+
Sbjct: 586 I 586
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 156/310 (50%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + +K + FN +I+ LCK +++A+E M+ P++ +Y ++ G+ +
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ MK G +PD +YG I+ C + +EA + +M+ +P+ + T
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ L A + + + G P TYN ++ A ++++A ++ EM + G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P++ TY+I+++ + G ++A+++ M K G +PT TY ++ + ++ A
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISK-GIQPTRVTYTSLIYVLSKRGRMKQA 420
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++++ +G+ P + M++ LI+ C +D A +EM + + P F+ L Q
Sbjct: 421 DDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQG 480
Query: 301 LRDEGMEETA 310
EG E A
Sbjct: 481 RCREGKVEAA 490
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 157/331 (47%), Gaps = 22/331 (6%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTI---LLEGWGQQKNLLSMNEV 67
P L +T+ + V +EVF+++ R IK+Y + L+ + K E
Sbjct: 86 PSLQLLKETI--NSGVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFEC 143
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ MK G P V + M++ + R ++A L+ EM K S F +IN L
Sbjct: 144 FDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCK 203
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
E +L +A +F G + G +P TYN ++ YC R+ A + D M+ G+ P++ T
Sbjct: 204 EGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYT 263
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y + + K G+ EEA + ++M ++ G PT TY ++ +C ++MA D+M
Sbjct: 264 YGSFISGMCKEGKLEEASGMLEKM-KEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKM 322
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS----------NL 297
G++P + Y+ LI++L + K+D+A +EM + G+ P ++ N+
Sbjct: 323 VREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNV 382
Query: 298 KQA--LRDE----GMEETAVVLAQKIDKLRK 322
K+A L DE G++ T V I L K
Sbjct: 383 KKAFTLHDEMISKGIQPTRVTYTSLIYVLSK 413
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ + + FN L+ C+ VE A+E+ ++MK R PD SY L+ G+ ++ +
Sbjct: 462 MDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGD 521
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V EM GF P +++Y +I C + D A +L +EM + P+ + + +
Sbjct: 522 MKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLS 581
Query: 121 LINGLGS 127
LI G+G+
Sbjct: 582 LIEGIGN 588
>gi|124360979|gb|ABN08951.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 511
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 156/319 (48%), Gaps = 2/319 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+FN L+ R ++ A+ VF + R F D KS ILL G+ + ++ S+ Y EM
Sbjct: 184 EFNVLLKVFATQRQMKEARSVFVRFVDR-FKADTKSMNILLLGFKETGDVTSVELFYHEM 242
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GF+PD VS+GI I+A+C R+ +A+ L EME+ S TLI+G G +
Sbjct: 243 VKRGFKPDSVSFGIRIDAYCKKGRFGDALRLLEEMESRKFVVSVETITTLIHGAGLVQNP 302
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A Q F + R ++ YNA++ + + A +MD M + I P+ TY +
Sbjct: 303 GKAWQLFNEIPLRNLVVDSGVYNALITTLVRNRDVVSALSLMDGMIEKQILPDGVTYHTI 362
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L+K+ E ++++M+++ P T ++++ FC+N+++D+++ +W+ + +G
Sbjct: 363 FLGLMKSRGIEGVSELYQKMTKRKFV-PKTRTVVVLMKYFCHNSRLDLSLSLWNYLVEKG 421
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P H L+ LC + +A ++ L+ G F L++ L+ +
Sbjct: 422 HCPHAHALDLLVTGLCSRGLVQEAFSCSKQTLERGRYISSTAFLMLERLLKQSRDVDKLK 481
Query: 312 VLAQKIDKLRKTPLVDRGQ 330
L Q I KLR RG
Sbjct: 482 ELDQMIKKLRSVLPPSRGH 500
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 4/256 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K + F ID CK A + ++M+ R+F +++ T L+ G G +N
Sbjct: 242 MVKRGFKPDSVSFGIRIDAYCKKGRFGDALRLLEEMESRKFVVSVETITTLIHGAGLVQN 301
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ E+ D Y +I + A+ L M P + T
Sbjct: 302 PGKAWQLFNEIPLRNLVVDSGVYNALITTLVRNRDVVSALSLMDGMIEKQILPDGVTYHT 361
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ GL + + + + + KR F P+ T ++ +C + R++ + + + + + G
Sbjct: 362 IFLGLMKSRGIEGVSELYQKMTKRKFVPKTRTVVVLMKYFCHNSRLDLSLSLWNYLVEKG 421
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ D+++ L G +EA+S K+ + G + + + ++ R+ + VD
Sbjct: 422 HCPHAHALDLLVTGLCSRGLVQEAFSCSKQTLER-GRYISSTAFLMLERLLKQSRDVD-K 479
Query: 241 MRIWDEM--KARGVLP 254
++ D+M K R VLP
Sbjct: 480 LKELDQMIKKLRSVLP 495
>gi|357501695|ref|XP_003621136.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496151|gb|AES77354.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 821
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 156/319 (48%), Gaps = 2/319 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+FN L+ R ++ A+ VF + R F D KS ILL G+ + ++ S+ Y EM
Sbjct: 184 EFNVLLKVFATQRQMKEARSVFVRFVDR-FKADTKSMNILLLGFKETGDVTSVELFYHEM 242
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GF+PD VS+GI I+A+C R+ +A+ L EME+ S TLI+G G +
Sbjct: 243 VKRGFKPDSVSFGIRIDAYCKKGRFGDALRLLEEMESRKFVVSVETITTLIHGAGLVQNP 302
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A Q F + R ++ YNA++ + + A +MD M + I P+ TY +
Sbjct: 303 GKAWQLFNEIPLRNLVVDSGVYNALITTLVRNRDVVSALSLMDGMIEKQILPDGVTYHTI 362
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L+K+ E ++++M+++ P T ++++ FC+N+++D+++ +W+ + +G
Sbjct: 363 FLGLMKSRGIEGVSELYQKMTKRKFV-PKTRTVVVLMKYFCHNSRLDLSLSLWNYLVEKG 421
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P H L+ LC + +A ++ L+ G F L++ L+ +
Sbjct: 422 HCPHAHALDLLVTGLCSRGLVQEAFSCSKQTLERGRYISSTAFLMLERLLKQSRDVDKLK 481
Query: 312 VLAQKIDKLRKTPLVDRGQ 330
L Q I KLR RG
Sbjct: 482 ELDQMIKKLRSVLPPSRGH 500
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 116/266 (43%), Gaps = 4/266 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K + F ID CK A + ++M+ R+F +++ T L+ G G +N
Sbjct: 242 MVKRGFKPDSVSFGIRIDAYCKKGRFGDALRLLEEMESRKFVVSVETITTLIHGAGLVQN 301
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ E+ D Y +I + A+ L M P + T
Sbjct: 302 PGKAWQLFNEIPLRNLVVDSGVYNALITTLVRNRDVVSALSLMDGMIEKQILPDGVTYHT 361
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ GL + + + + + KR F P+ T ++ +C + R++ + + + + + G
Sbjct: 362 IFLGLMKSRGIEGVSELYQKMTKRKFVPKTRTVVVLMKYFCHNSRLDLSLSLWNYLVEKG 421
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ D+++ L G +EA+S K+ + G + + + ++ R+ + VD
Sbjct: 422 HCPHAHALDLLVTGLCSRGLVQEAFSCSKQTLER-GRYISSTAFLMLERLLKQSRDVD-K 479
Query: 241 MRIWDEM--KARGVLPVMHMYSTLIN 264
++ D+M K R VLP ++T I+
Sbjct: 480 LKELDQMIKKLRSVLPPSRGHATGIS 505
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 144/296 (48%), Gaps = 5/296 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK V A+EV + P Y L+ G+ Q L + +MK
Sbjct: 161 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 220
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD ++Y +IN C A+R A +L EM+ P+ F TLI+ G +L +
Sbjct: 221 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 280
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ ++ G +P +Y ++V A+C + +I +A ++D+M + PN + Y+ ++
Sbjct: 281 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 340
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
++ G ++A+ + ++M + G P++ TY ++++ C +Q+ A I + + ++P
Sbjct: 341 VEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 399
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGI----RPPGQLFSNLKQALRDEGME 307
Y+TLI++ C+ +D A Q M GI R QL S L A R ME
Sbjct: 400 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 455
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 152/320 (47%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +N L+ LC++ + + D+M ++ PD +Y+IL +G + + +M
Sbjct: 80 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 139
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ + +G + I++N C + A E+ + + P+ I+ TLING
Sbjct: 140 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 199
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A FGQ K R +P+ TYNA++ C + RI +A ++ EM+ G+ P
Sbjct: 200 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 259
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ + G+ E+ + V M ++ G +P V +Y +V FC N ++ A+ I
Sbjct: 260 VETFNTLIDAYGRTGQLEKCFIVLSEM-QENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 318
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M + VLP +Y+ +I++ D A ++M GI P ++ L + L ++
Sbjct: 319 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 378
Query: 305 GMEETAVVLAQKIDKLRKTP 324
A + + R P
Sbjct: 379 SQISEAEEIINSLSNHRLIP 398
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 36/349 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I + ++ A EVFD+M +R P+ +Y +++G + +L + + +M
Sbjct: 18 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 77
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+ ++Y ++++ C A R E L EM + P + L +GL
Sbjct: 78 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 137
Query: 133 EALQFFGQSKKRGFE-----------------------------------PEAPTYNAVV 157
L FG+ K G P YN ++
Sbjct: 138 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 197
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + + A+ +M+ I P+ TY+ +++ L KA R A + M + G
Sbjct: 198 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDNGV 256
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
PTV T+ ++ + Q++ + EM+ G+ P + Y +++N+ C K+ +A
Sbjct: 257 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 316
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+M + P Q+++ + A + G + A +L +K+ +P +
Sbjct: 317 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 365
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 136/305 (44%), Gaps = 36/305 (11%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K + +N LI+ LCK+ + AQ++ +M+ +P ++++ L++ +G+ L
Sbjct: 221 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 280
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
V EM+++G +P+VVSYG ++NA C + EAV + +M
Sbjct: 281 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM------------------- 321
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ P A YNA++ AY + A+ ++++M+ GI P+
Sbjct: 322 ----------------FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 365
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY++++ L + EA + +S P +Y ++ CY +D A+ +
Sbjct: 366 VTYNLLIKGLCNQSQISEAEEIINSLSNHR-LIPDAVSYNTLISACCYRGNIDKALDLQQ 424
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M G+ + Y LI+ L +L++ +Q+M+ + P + + + +A G
Sbjct: 425 RMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 484
Query: 306 MEETA 310
E A
Sbjct: 485 NEIKA 489
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 69 REMKDDGFEP-DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
R M DG P + SY ++I A R +AVE+F EM P+ + T+I+G
Sbjct: 3 RRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIK 62
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
L + Q G +P A TYN ++ C + R+ + ++DEM + P+ T
Sbjct: 63 GGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFT 122
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSR---------------------------------- 213
Y I+ L + G ++ S+F + +
Sbjct: 123 YSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLV 182
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
G PT Y ++ +C +++ A + +MK+R + P Y+ LIN LC +++
Sbjct: 183 NAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERIT 242
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTPLVDRGQ 330
+A EM D G+ P + F+ L A G +E+ +VL++ + K +V G
Sbjct: 243 NAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 300
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + + +++ CK+ + A + D M + P+ + Y +++ + +
Sbjct: 286 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 345
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +MK +G P +V+Y ++I C+ + EA E
Sbjct: 346 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE------------------- 386
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN L + + + P+A +YN ++ A C+ I+ A + M K G
Sbjct: 387 IINSLSNHRLI----------------PDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 430
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
I RTY ++ L AGR E ++++M + P+ + + I+V +
Sbjct: 431 IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN-NVVPSNAIHNIMVEAY 480
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ +RM R P +Y +V+ + A+ ++DEM R VLP Y+T+I+
Sbjct: 1 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVL 313
L+ + +M+ G++P ++ L L G M ET+ +L
Sbjct: 61 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALL 108
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ LCK+ +E A+ + ++M R PDI ++ L+ L ++ R++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV ++ I+INA C A+ LF EM+ + C P + TLI+ L S +L
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL + G TYN ++ C MRI +A + D+M GI N T++ ++
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K + ++A+ + +M + G +P TY ++ +C + A I + M A G
Sbjct: 504 DGLCKDKKIDDAFGLINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ Y TLIN LC + A K + M G+RP + ++ + Q+L
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 145/286 (50%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ FN L+ LC++ V A + ++M R PD ++T L++G+ ++ +
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + V M + G V+ ++IN +C R ++A+ ++ A +P + T
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+NGL + AL+ + G +P+ TYN VV C + ++ +A ++++M G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++ ++ L R EEA + ++++ K G P V T+ I++ C +A
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLA 410
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+R+++EMK G P Y+TLI++LC KL A ++M G
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FG++ + +N L++ L + ++ + V+ +M R PD+ ++ L++ + + +
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ EM G PD ++ ++ + A+ + M C + LIN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G R+ +AL + Q GFEP+ TYN V C + + A ++MD M + G P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY+IV++ L K G+ EEA + +M + G P ++T+ ++ C +++ A+ +
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++ +GV P ++ ++ LIN+LC A + F+EM + G P ++ L
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 37/289 (12%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ FN LI+ LCK A +F++MK
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMK--------------------------- 418
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ G PD V+Y +I+ CS + +A++L ++ME+T C S + T+I+G
Sbjct: 419 --------NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R+ EA + F Q +G A T+N ++ C +I+DA+ ++++M G+ PN
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPN 530
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +L H K G ++A + + M+ G E V TY ++ C + +A+++
Sbjct: 531 NITYNSILTHYCKQGDIKKAADILETMTAN-GFEVDVVTYGTLINGLCKAGRTQVALKVL 589
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
M+ +G+ P Y+ ++ SL + + DA F+EM ++G PP L
Sbjct: 590 RGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG-EPPDAL 637
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 130/281 (46%), Gaps = 1/281 (0%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
D Y LL + + + VY EM G +PDVV++ ++ A C A + AV +
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
EM + P F TL+ G E + AL+ + + G T N ++ YC
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
R+ DA + + G P+ TY+ ++ L + A V M ++ G +P V T
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE-GHDPDVFT 323
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y IVV C N Q++ A I ++M RG LP + ++TLI +LC ++L++A +++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G+ P F+ L AL G A+ L +++ TP
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 2/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + +N +ID LCK +E A+EVFD+M + + ++ L++G + K
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M +G +P+ ++Y ++ +C +A ++ M A + + T
Sbjct: 512 IDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL R AL+ + +G P YN V+ + I DA + EM + G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIV 227
P+ TY IV L + G +EA+ M K G P S++ ++
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRML 678
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 5/277 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID LC + +A ++ M+ +Y +++G ++ + EV+ +M
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + +++ +I+ C K+ D+A L +M + +P+ + +++ + +
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A GFE + TY ++ C + R A +++ MR G+ P + Y+ VL
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ-VDMAMRIWDEMKARG 251
L + +A S+F+ M+ + G P TY+IV R C + A EM +G
Sbjct: 609 QSLFRRNNIRDALSLFREMA-EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667
Query: 252 VLPVMHMYSTLINSLCH---EDKLDDACKYFQEMLDI 285
+P + L L + +D A + E +D+
Sbjct: 668 FIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 704
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G + Y ++ + +++ + ++ EM ARG+ P + ++TL+ +LC ++ A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+EM G+ P F+ L Q +EG E A+
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 1/292 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC V A VFD M R P + +Y+ILL+ + + EM+
Sbjct: 165 FNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMR 224
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD+V+Y ++INA C+ DEA+ + ++ + CKP + ++ L +R
Sbjct: 225 AKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWK 284
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + F + P+ T+N +V + C ++ A +++D M + G P+ TY +L
Sbjct: 285 EVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSIL 344
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L GR ++A + R+ + G +P Y V++ C Q + A + EM
Sbjct: 345 DGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDC 403
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
P ++T+I SLC + +D A K ++M + G P ++++ L +E
Sbjct: 404 PPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNE 455
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 144/299 (48%), Gaps = 5/299 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ L+D CK+ +A + D+M+ + +PDI +Y +L+ + ++
Sbjct: 192 GCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEA 251
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ G +PD V+Y ++ + C ++R+ E ELF EM + C P F T++
Sbjct: 252 LNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTS 311
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + A++ + G P+ TY++++ C R++DA ++ ++ G P+
Sbjct: 312 LCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPD 371
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRM--SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
T Y VL L + E A + M S P P T+ V+ C VD A++
Sbjct: 372 TIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCP---PDEVTFNTVIASLCQKGLVDRAIK 428
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ ++M G P + Y+++I+ LC+E +DDA + + G +P F+ L + L
Sbjct: 429 VVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 144/297 (48%), Gaps = 3/297 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +G K + + ++ LC E A+E+ +M PD ++ ++ Q+
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL 422
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V +M ++G PD+V+Y +I+ C+ + D+A+EL +++ CKP F T
Sbjct: 423 VDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNT 482
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL S R +A Q P+A T+N V+ + C + A + M + G
Sbjct: 483 LLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENG 542
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+IV+ L+KAG+T+EA + M+ GT P + TY V+ +++ A
Sbjct: 543 CIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN--GT-PDLITYNTVISNITKAGKMEEA 599
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ + M + G+ P Y +L +C ED D A + + D+G+ P ++++
Sbjct: 600 LDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDI 656
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 147/316 (46%), Gaps = 4/316 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + +N +++ C++ +E A+ + M F PD ++ L+ + +
Sbjct: 124 LGASATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPD 180
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V+ +M G P VV+Y I+++A C A Y +A+ L EM A C+P + LIN
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLIN 240
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ +E + EAL G +P+A TY V+ + C S R + + EM P
Sbjct: 241 AMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP 300
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ T++ ++ L + G + A V MS G P + TY ++ C +VD A+ +
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEH-GCIPDIVTYSSILDGLCDVGRVDDAVEL 359
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+K+ G P Y+T++ LC ++ + A + EM+ P F+ + +L
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419
Query: 304 EGMEETAVVLAQKIDK 319
+G+ + A+ + +++ +
Sbjct: 420 KGLVDRAIKVVEQMSE 435
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 146/309 (47%), Gaps = 36/309 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I +LC+ V+RA +V ++M + +PDI +Y +++G ++ + E+ ++
Sbjct: 410 FNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQ 469
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+V++ ++ CS R+++A +L M ++C P F T+I L + L
Sbjct: 470 SYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLL 529
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A++ + G P TYN VV A + + +A +++ M P+ TY+ V+
Sbjct: 530 QAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN--GTPDLITYNTVI 587
Query: 193 HHLIKAGRTEEAYSVFKRM-------------------SRKPGTE--------------- 218
++ KAG+ EEA + + M R+ GT+
Sbjct: 588 SNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLS 647
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P + Y ++ FC N + D+A+ + M + G +P Y L+ +L +E LD+A +
Sbjct: 648 PDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQL 707
Query: 279 FQEMLDIGI 287
+ +G+
Sbjct: 708 LVNLCSLGV 716
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 3/253 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +G K ++ FN L+ LC E A+++ M PD ++ ++ Q+
Sbjct: 468 LQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
LL E + M ++G P+ +Y I+++A A + EA++L M TN P + T
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM--TNGTPDLITYNT 585
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + ++ EAL G P+ TY ++ C + A RM+ ++ G
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ Y+ +L + RT+ A F M G P STY I++ Y +D A
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSS-GCMPDESTYIILLEALAYECLLDEA 704
Query: 241 MRIWDEMKARGVL 253
++ + + GVL
Sbjct: 705 KQLLVNLCSLGVL 717
>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15200
gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 152/289 (52%), Gaps = 7/289 (2%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FG+ +L F+ L+ LC+ +HVE A+ +F ++R F DIK+ ++L GW N+
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++++ PDVVSYG MINA + +A+EL+R M T P I +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-- 180
+ L +KR+ EAL+ F + ++G +P TYN+++ C R + +++EM G
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T+ +L + + R+++ V +RM+ K E T Y ++ R++ + +
Sbjct: 385 CSPNDVTFSYLLKY---SQRSKDVDIVLERMA-KNKCEMTSDLYNLMFRLYVQWDKEEKV 440
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
IW EM+ G+ P Y+ I+ L + K+ +A YFQEM+ G+ P
Sbjct: 441 REIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQ-SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
S ++ +++ LG +R E Q F + SK+ GF E TY ++ Y + ++++A +
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEK-TYEVLLNRYAAAHKVDEAVGV 200
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ ++ GI + + +L L + E A ++F R+ G + + +++ +C
Sbjct: 201 FERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCD--IKAMNMILNGWC 258
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
V A R W ++ A P + Y T+IN+L + KL A + ++ M D P +
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 293 LFSNLKQAL 301
+ +N+ AL
Sbjct: 319 ICNNVIDAL 327
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 110/255 (43%), Gaps = 39/255 (15%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
Y +L+ G+ + ++V+ EM K DGF + +Y +++N + +A + DEAV +F
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEK-TYEVLLNRYAAAHKVDEAVGVFERR 204
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ F L+ L K + A F S++R F + N ++ +C +
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFC-SRRREFGCDIKAMNMILNGWCVLGNV 263
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
++A R ++ P+ +Y +++ L K G+ +A +++ M
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAM--------------- 308
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
WD + P + + + +I++LC + ++ +A + F+E+ + G
Sbjct: 309 -----------------WDTRRN----PDVKICNNVIDALCFKKRIPEALEVFREISEKG 347
Query: 287 IRPPGQLFSNLKQAL 301
P +++L + L
Sbjct: 348 PDPNVVTYNSLLKHL 362
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKM--KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
+N L+ LCK R E+ E+ ++M K P+ +++ LL+ + K++ + V
Sbjct: 355 YNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDV---DIVLER 411
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M + E Y +M + + ++ E++ EME + P + I+GL ++ +
Sbjct: 412 MAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGK 471
Query: 131 LSEALQFFGQSKKRGFEPEAPT 152
+ EAL +F + +G PE T
Sbjct: 472 IGEALSYFQEMMSKGMVPEPRT 493
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 158/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ N ++ K +E A ++ +M + R + ++ I++ ++
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E M+ GF+P+VVSY +I+ + S + A + M +P + + +
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ E RL EA F + + G P A TYN ++ YC + A+ DEM K G
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY++++H L GR EA + K M RK G P TY I++ + A
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEM-RKKGIIPDAITYNILINGYSRCGNAKKA 443
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +EM ++G+ P Y++LI L +++ +A F+++LD G+ P +F+ +
Sbjct: 444 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDG 503
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
G E A +L +++D+ P
Sbjct: 504 HCANGNVERAFMLLKEMDRKSVPP 527
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 155/307 (50%), Gaps = 1/307 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +++ LCK +++A+E M+ F P++ SY ++ G+ + N+ + M+
Sbjct: 252 FNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMR 311
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD +YG +I+ C R +EA LF +M P+ + TLI+G ++ L
Sbjct: 312 VKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLE 371
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + K+G P TYN +V A R+ +A M+ EMRK GI P+ TY+I++
Sbjct: 372 RAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILI 431
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + G ++A+ + M K G EPT TY ++ + ++ A +++++ +GV
Sbjct: 432 NGYSRCGNAKKAFDLHNEMLSK-GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + M++ +++ C ++ A +EM + P F+ L Q EG E A +
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550
Query: 313 LAQKIDK 319
L ++ +
Sbjct: 551 LLDEMKR 557
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 147/301 (48%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL +N LID C +ERA D+M K+ P + +Y +L+ +
Sbjct: 345 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 404
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +EM+ G PD ++Y I+IN + +A +L EM + +P+ + +
Sbjct: 405 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTS 464
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L R+ EA F + +G P+ +NA+V +C + + A+ ++ EM +
Sbjct: 465 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKS 524
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T++ ++ + G+ EEA + M R+ G +P +Y ++ + + A
Sbjct: 525 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRR-GIKPDHISYNTLISGYGRRGDIKDA 583
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ DEM + G P + Y+ LI LC + D A + +EM++ GI P + +L +
Sbjct: 584 FRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643
Query: 301 L 301
+
Sbjct: 644 M 644
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ + + FN L+ C+ VE A+ + D+MK+R PD SY L+ G+G++ +
Sbjct: 520 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGD 579
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V EM GF P +++Y +I C + D A EL +EM P + +
Sbjct: 580 IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 639
Query: 121 LINGLGSEKRLSE 133
LI G+G+ L E
Sbjct: 640 LIEGMGNVDTLVE 652
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+D+++ + R +EA+ F M K G P + T ++ +F +++MA ++ E
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEK-GIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M + ++ ++ ++N LC E KL A ++ M +G +P ++ + G
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299
Query: 307 EETA 310
E A
Sbjct: 300 IEGA 303
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G L +N LI LCK++ + A+E+ +M + PD +Y L+EG G
Sbjct: 590 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDT 649
Query: 61 LLSMN 65
L+ N
Sbjct: 650 LVEDN 654
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 154/342 (45%), Gaps = 36/342 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ K V +A EV MK ++K+Y++L+ G+ + K+ +
Sbjct: 464 GFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNA 523
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ ++ DG +PDVV Y +I A C D A+ + +EM+ C+P+ F +I+G
Sbjct: 524 FAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHG 583
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ AL+ F ++ G P T+NA+V ++ A ++DEM G+ P+
Sbjct: 584 FARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPD 643
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------------ 232
TY ++H G T +A+ F +M R G + V TYE +++ C
Sbjct: 644 EHTYTTIMHGYAALGDTGKAFEYFTKM-RNEGLQLDVFTYEALLKACCKSGRMQSALAVT 702
Query: 233 --------------YNAQVDMAMR---IWD------EMKARGVLPVMHMYSTLINSLCHE 269
YN +D R IW+ +M GV P +H Y++ IN+ C
Sbjct: 703 REMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKA 762
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ A K +EM G++P + ++ L + + E A+
Sbjct: 763 GDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKAL 804
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 155/306 (50%), Gaps = 1/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I C++ +++RA+ + +M++ D + Y +++G+ +N V++ +K
Sbjct: 402 YGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLK 461
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF P V++YG +IN + + +A+E+ + M++ K + + LING K +
Sbjct: 462 ECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWT 521
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A F K G +P+ YN ++ A+C ++ A M+ EM+K P +RT+ ++
Sbjct: 522 NAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPII 581
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H +AG A +F M R+ G PTV T+ +V +++ A+ I DEM GV
Sbjct: 582 HGFARAGEMRRALEIFDMM-RRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGV 640
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P H Y+T+++ A +YF +M + G++ + L +A G ++A+
Sbjct: 641 SPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALA 700
Query: 313 LAQKID 318
+ ++++
Sbjct: 701 VTREMN 706
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 148/299 (49%), Gaps = 1/299 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GLK ++ +N +I C +++RA + +M+K R P +++ ++ G+ + +
Sbjct: 532 KDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMR 591
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E++ M+ G P V ++ ++ ++ ++AVE+ EM P H + T++
Sbjct: 592 RALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIM 651
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G + +A ++F + + G + + TY A++ A C S R+ A + EM I
Sbjct: 652 HGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIP 711
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
NT Y+I++ + G EA + ++M+++ G +P + TY + C + A +
Sbjct: 712 RNTFVYNILIDGWARRGDIWEAADLMQQMNQE-GVQPDIHTYTSFINACCKAGDMLRATK 770
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+EM+A GV P + Y+TLI+ + + A F+E+ G++P ++ L +L
Sbjct: 771 TMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSL 829
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 1/240 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN L+ L + R +E+A E+ D+M PD +YT ++ G+ +
Sbjct: 600 MRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGD 659
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E + +M+++G + DV +Y ++ A C + R A+ + REM A + ++
Sbjct: 660 TGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNI 719
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + EA Q + G +P+ TY + + A C + + A + M+EM G
Sbjct: 720 LIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAG 779
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN +TY ++H A E+A S F+ + + G +P + Y ++ A V A
Sbjct: 780 VKPNVKTYTTLIHGWANASLPEKALSCFEEL-KLAGLKPDKAVYHCLMTSLLSRATVAEA 838
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 146/367 (39%), Gaps = 74/367 (20%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+F ++ + + RA++ F+ M+ R DP YT L+ + +++ R+M
Sbjct: 296 EFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKM 355
Query: 72 KDDGFEPDVVSYGIMIN-----------------------------------AHCSAKRY 96
++G E +V+Y I++ A+C A
Sbjct: 356 NEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNM 415
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
D A L REME I+ T+++G + + L F + K+ GF P TY +
Sbjct: 416 DRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCL 475
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ Y +++ A + M+ GI N +TY ++++ +K A++VF+ + K G
Sbjct: 476 INMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVI-KDG 534
Query: 217 TEPTVSTYEIVVRMFCYNAQVD-----------------------------------MAM 241
+P V Y +++ FC +D A+
Sbjct: 535 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRAL 594
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ-- 299
I+D M+ G +P +H ++ L+ L + K++ A + EM G+ P ++ +
Sbjct: 595 EIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGY 654
Query: 300 -ALRDEG 305
AL D G
Sbjct: 655 AALGDTG 661
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 146/312 (46%), Gaps = 7/312 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F +++DT + + + F+++KK P + + +++ + ++ ++ + + M+
Sbjct: 268 FRKVLDT--QPENWQAVVSAFERIKK----PSRREFGLMVGYYARRGDMHRARQTFESMR 321
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P Y +I+A+ + +EA+ R+M + S + ++ G
Sbjct: 322 ARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAE 381
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A +F ++K+R A Y ++ AYC + ++ A ++ EM + GI Y ++
Sbjct: 382 AADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMM 441
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
E+ VFKR+ ++ G P+V TY ++ M+ +V A+ + MK+ G+
Sbjct: 442 DGYTMIRNEEKCLIVFKRL-KECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGI 500
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
M YS LIN +A F++++ G++P L++N+ +A G + A+
Sbjct: 501 KHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIH 560
Query: 313 LAQKIDKLRKTP 324
+ +++ K R P
Sbjct: 561 MVKEMQKERCRP 572
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ ++ + L+ CKS ++ A V +M ++ + Y IL++GW ++ ++
Sbjct: 674 GLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEA 733
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++M +G +PD+ +Y INA C A A + EMEA KP+ + TLI+G
Sbjct: 734 ADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHG 793
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
+ +AL F + K G +P+ Y+ ++ + + +AY
Sbjct: 794 WANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVAEAY 839
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID + + A ++ +M + PDI +YT + + ++L + EM+
Sbjct: 717 YNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEME 776
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+V +Y +I+ +A ++A+ F E++ KP ++ L+ L S ++
Sbjct: 777 AAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRATVA 836
Query: 133 EALQFFG 139
EA + G
Sbjct: 837 EAYIYSG 843
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+P + +VG Y ++ A + + MR GI P++ Y ++H EEA S
Sbjct: 291 KPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALS 350
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
++M+ + G E ++ TY IVV F + A + + K R ++Y +I +
Sbjct: 351 CVRKMNEE-GIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAY 409
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
C +D A +EM + GI P ++ + EE +++ +++ + P V
Sbjct: 410 CQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSV 469
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 141/275 (51%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L+D CK V+ A+ + K+ D+ +Y L++G+ K + +++ M
Sbjct: 283 FSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMA 342
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +V SY MIN C K DEAV LF EM P+ + +LI+GLG ++S
Sbjct: 343 SRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKIS 402
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
L+ + RG P TYN+++ A C + ++ A ++ ++ GI P+ TY +++
Sbjct: 403 CVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLI 462
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L ++G+ E+A VF+ + K G V TY ++++ FC D A+ + +M+ G
Sbjct: 463 KGLCQSGKLEDAQKVFEDLLVK-GYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGC 521
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+P Y +I SL +D+ D A K +EM+ G+
Sbjct: 522 IPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 155/375 (41%), Gaps = 69/375 (18%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC H+ +A DK+ + F D SY L+ G + + + ++ + +
Sbjct: 143 FNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD 202
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT----------------------- 109
+P+ V Y ++I+ C AK ++A +L+ +M A
Sbjct: 203 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLK 262
Query: 110 ------------NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
N P + F L++ E ++ EA G + K+ + TYN+++
Sbjct: 263 EAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLM 322
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM-SRKP- 215
YC IN A + D M G+ N ++Y +++ L K +EA ++F+ M RK
Sbjct: 323 DGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKII 382
Query: 216 --------------------------------GTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
G P + TY ++ C N VD A+ +
Sbjct: 383 PNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIAL 442
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+K +G+ P M+ Y+ LI LC KL+DA K F+++L G ++ + Q
Sbjct: 443 LTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCV 502
Query: 304 EGMEETAVVLAQKID 318
+G+ + A+ L K++
Sbjct: 503 KGLFDAALALLSKME 517
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 162/330 (49%), Gaps = 9/330 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + FN LI+ + + VF K+ K+ FDP+ ++ L++G + +
Sbjct: 96 MELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGH 155
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ GF D VSYG +IN C R A++L + ++ +P+ ++
Sbjct: 156 IHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM 215
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + K +++A + Q + P+ T N+++ +C ++ +A ++ +M
Sbjct: 216 IIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILEN 275
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P T+ I++ K G+ +EA + ++ K V TY ++ +C +++ A
Sbjct: 276 INPRMYTFSILVDAFCKEGKVKEA-KMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKA 334
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I+D M +RGV+ + Y+T+IN LC +D+A F+EM I P +++L
Sbjct: 335 KDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDG 394
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L G + + VL + +D++ DRGQ
Sbjct: 395 LGKLG--KISCVL-KLVDEMH-----DRGQ 416
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 106/207 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + +I+ LCK + V+ A +F++M+ R+ P++ +Y L++G G+ + +
Sbjct: 345 GVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCV 404
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM D G P++++Y +++A C D+A+ L ++ +P + + LI G
Sbjct: 405 LKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKG 464
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +L +A + F +G+ + TY ++ +C + A ++ +M G PN
Sbjct: 465 LCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPN 524
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+TY+IV+ L + + A + + M
Sbjct: 525 AKTYEIVILSLFEKDENDMAEKLLREM 551
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 4/280 (1%)
Query: 41 FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAV 100
F I Y+ L ++ NL+S K+ P ++ + ++++ AK + A+
Sbjct: 33 FPSSISLYSQLHHHQDEENNLISSFNSLLHHKNP--TPPIIQFNKILSSLVKAKHHSTAL 90
Query: 101 ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
L ++ME F LIN S + FG+ K+GF+P A T+N ++
Sbjct: 91 SLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGL 150
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C I+ A D++ G + +Y +++ L K GR A + KR+ K +P
Sbjct: 151 CLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKL-VQPN 209
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
Y +++ C V+ A ++ +M A+ + P ++LI C +L +A
Sbjct: 210 AVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLH 269
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDK 319
+M+ I P FS L A EG ++E ++L + K
Sbjct: 270 KMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKK 309
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 149/296 (50%), Gaps = 1/296 (0%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L +N +I+ V++A +F M + P++ +YTI+++G + + + V++
Sbjct: 204 LVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQ 263
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M D G P++V+Y +I+ + S ++ E V + +EM A +P + L++ L +
Sbjct: 264 QMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKG 323
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ +EA + F ++G +P+ Y ++ Y +++ + +D M GI PN ++
Sbjct: 324 KCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFN 383
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
IV K EA +F +M R+ G P V Y ++ C +VD A +++M
Sbjct: 384 IVFCAFAKKAMIGEAMDIFNKM-RQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMIN 442
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
GV P + ++++L+ LC DK + A + F EM++ GI P F+ + L EG
Sbjct: 443 EGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEG 498
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 147/304 (48%), Gaps = 4/304 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM---KKRRFDPDIKSYTILLEGWGQ 57
M + G + +N L+ C E A E+ M + R P++ SY ++ G+
Sbjct: 157 MSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFT 216
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + ++ +M D G P+VV+Y I+I+ C A+ D A +F++M +P+
Sbjct: 217 EGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVT 276
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+G S + E ++ + G EP+ TY ++ C + +A ++ D M
Sbjct: 277 YTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMI 336
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ GI P+ Y I+LH G E +S M G P + IV F A +
Sbjct: 337 RKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGN-GISPNHYIFNIVFCAFAKKAMI 395
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
AM I+++M+ +G+ P + Y+TLI++LC ++DDA F +M++ G+ P +F++L
Sbjct: 396 GEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSL 455
Query: 298 KQAL 301
L
Sbjct: 456 VYGL 459
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 140/301 (46%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ + + L+D LCK A+++FD M ++ PD+ Y I+L G+ +
Sbjct: 300 MSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGA 359
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L M+ M +G P+ + I+ A EA+++F +M P+ + T
Sbjct: 360 LSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYAT 419
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ +A F Q G P + ++V C + A + EM G
Sbjct: 420 LIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQG 479
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN ++ ++ +L GR +A + M R GT P + +Y ++R C + D A
Sbjct: 480 IHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMER-VGTRPDIISYNALIRGHCLVGKTDEA 538
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ D M + G+ P Y+TL++ C + ++DDA FQEML GI P ++ +
Sbjct: 539 SKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHG 598
Query: 301 L 301
L
Sbjct: 599 L 599
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 145/288 (50%), Gaps = 7/288 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G+ + + +ID LCK++ V+RA+ VF +M + P+I +YT L+ G+ GQ K +
Sbjct: 234 GIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEV 293
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ M +EM G EPD +YG++++ C + EA +LF M KP I+ +
Sbjct: 294 VRM---LKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGII 350
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++G ++ LSE F G P +N V A+ I +A + ++MR+ G+
Sbjct: 351 LHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGL 410
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN Y ++ L K GR ++A F +M + G P + + +V C + + A
Sbjct: 411 SPNVVNYATLIDALCKLGRVDDAELKFNQMINE-GVAPNIVVFTSLVYGLCTIDKWEKAG 469
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ EM +G+ P + ++T++ +LC E ++ A + M +G RP
Sbjct: 470 ELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRP 517
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 154/312 (49%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN + K + A ++F+KM+++ P++ +Y L++ + + + +M
Sbjct: 382 FNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMI 441
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G P++V + ++ C+ ++++A ELF EM P+ F T++ L +E R+
Sbjct: 442 NEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVM 501
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + ++ G P+ +YNA++ +C + ++A +++D M G+ PN TY+ +L
Sbjct: 502 KAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLL 561
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H + GR ++AYSVF+ M G P V TY ++ + A ++ M G
Sbjct: 562 HGYCRDGRIDDAYSVFQEMLSN-GITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK 620
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
++ Y+ ++N L + +D+A K FQ + ++ F+ + AL +G +E A+
Sbjct: 621 QWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMN 680
Query: 313 LAQKIDKLRKTP 324
L I P
Sbjct: 681 LFATISANGLVP 692
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 150/344 (43%), Gaps = 25/344 (7%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTI-LLEGWGQQKNLL-SMN 65
PD ++ L+ C+ +E F + K + + LL+G K + +M
Sbjct: 92 PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM---EATNCKPSPHIFCTLI 122
+ R M + G P+VVSY ++ C R +EA+EL M + +C P+ + T+I
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NG +E ++ +A F +G P TY V+ C + ++ A + +M G+
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVR 271
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY ++H + G+ +E + K MS G EP TY +++ C + A +
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAH-GLEPDCFTYGLLLDYLCKKGKCTEARK 330
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS------- 295
++D M +G+ P + +Y +++ + L + + M+ GI P +F+
Sbjct: 331 LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFA 390
Query: 296 ---------NLKQALRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
++ +R +G+ V A ID L K VD +
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAE 434
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 1/315 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + F L+ LC E+A E+F +M + P++ + ++ + ++
Sbjct: 444 GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKA 503
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M+ G PD++SY +I HC + DEA +L M + KP+ + TL++G
Sbjct: 504 QRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHG 563
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ R+ +A F + G P TYN ++ + R ++A + M G +
Sbjct: 564 YCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWS 623
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I+L+ L K +EA +F+ + K + + T+ I++ + + + AM ++
Sbjct: 624 IYTYNIILNGLSKNNCVDEALKMFQSLCSKD-LQVDIITFNIMIGALLKDGRKEDAMNLF 682
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ A G++P + Y + +L E L++ F EM G P + + L + L
Sbjct: 683 ATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLR 742
Query: 305 GMEETAVVLAQKIDK 319
G A KID+
Sbjct: 743 GDISRAGAYLSKIDE 757
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + ++ +N LI C + A ++ D M P+ +Y LL G+ +
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR 569
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V++EM +G P VV+Y +++ +R+ EA EL+ M + + S + +
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + EAL+ F + + + T+N ++GA R DA + + G
Sbjct: 630 ILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ P+ TY ++ +LI+ G EE +F M K G P +VR
Sbjct: 690 LVPDVTTYRLIAENLIEEGSLEEFDGMFSEM-EKSGCAPNSLMLNFLVR 737
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G + + +N +++ L K+ V+ A ++F + + DI ++ I++ G++++
Sbjct: 619 GKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKED- 677
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+MN ++ + +G PDV +Y ++ +E +F EME + C P+ + L
Sbjct: 678 -AMN-LFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFL 735
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC----WSMRINDAYRMMDEMR 177
+ L +S A + + ++ F EA T + ++ + + + + Y ++E +
Sbjct: 736 VRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYHFLNEAK 795
Query: 178 K 178
K
Sbjct: 796 K 796
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 144/296 (48%), Gaps = 5/296 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK V A+EV + P Y L+ G+ Q L + +MK
Sbjct: 346 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 405
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD ++Y +IN C A+R A +L EM+ P+ F TLI+ G +L +
Sbjct: 406 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 465
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ ++ G +P +Y ++V A+C + +I +A ++D+M + PN + Y+ ++
Sbjct: 466 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 525
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
++ G ++A+ + ++M + G P++ TY ++++ C +Q+ A I + + ++P
Sbjct: 526 VEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 584
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGI----RPPGQLFSNLKQALRDEGME 307
Y+TLI++ C+ +D A Q M GI R QL S L A R ME
Sbjct: 585 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 640
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 152/320 (47%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +N L+ LC++ + + D+M ++ PD +Y+IL +G + + +M
Sbjct: 265 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 324
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ + +G + I++N C + A E+ + + P+ I+ TLING
Sbjct: 325 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 384
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A FGQ K R +P+ TYNA++ C + RI +A ++ EM+ G+ P
Sbjct: 385 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 444
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ + G+ E+ + V M ++ G +P V +Y +V FC N ++ A+ I
Sbjct: 445 VETFNTLIDAYGRTGQLEKCFIVLSEM-QENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 503
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M + VLP +Y+ +I++ D A ++M GI P ++ L + L ++
Sbjct: 504 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 563
Query: 305 GMEETAVVLAQKIDKLRKTP 324
A + + R P
Sbjct: 564 SQISEAEEIINSLSNHRLIP 583
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 36/349 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I + ++ A EVFD+M +R P+ +Y +++G + +L + + +M
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+ ++Y ++++ C A R E L EM + P + L +GL
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322
Query: 133 EALQFFGQSKKRGFE-----------------------------------PEAPTYNAVV 157
L FG+ K G P YN ++
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + + A+ +M+ I P+ TY+ +++ L KA R A + M + G
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDNGV 441
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
PTV T+ ++ + Q++ + EM+ G+ P + Y +++N+ C K+ +A
Sbjct: 442 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 501
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+M + P Q+++ + A + G + A +L +K+ +P +
Sbjct: 502 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 550
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 133/298 (44%), Gaps = 36/298 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ LCK+ + AQ++ +M+ +P ++++ L++ +G+ L V EM+
Sbjct: 413 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 472
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G +P+VVSYG ++NA C + EAV + +M
Sbjct: 473 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM-------------------------- 506
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ P A YNA++ AY + A+ ++++M+ GI P+ TY++++
Sbjct: 507 ---------FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + EA + +S P +Y ++ CY +D A+ + M G+
Sbjct: 558 KGLCNQSQISEAEEIINSLSNHR-LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ Y LI+ L +L++ +Q+M+ + P + + + +A G E A
Sbjct: 617 KSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKA 674
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 140/344 (40%), Gaps = 37/344 (10%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP-DVV 81
RH + + F + PD ++ ++ +L + R M DG P +
Sbjct: 143 GRHAD-VRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 201
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
SY ++I A R +AVE+F EM P+ + T+I+G L + Q
Sbjct: 202 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 261
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
G +P A TYN ++ C + R+ + ++DEM + P+ TY I+ L + G +
Sbjct: 262 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 321
Query: 202 EEAYSVFKRMSR----------------------------------KPGTEPTVSTYEIV 227
+ S+F + + G PT Y +
Sbjct: 322 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 381
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +C +++ A + +MK+R + P Y+ LIN LC +++ +A EM D G+
Sbjct: 382 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 441
Query: 288 RPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTPLVDRGQ 330
P + F+ L A G +E+ +VL++ + K +V G
Sbjct: 442 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 485
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + + +++ CK+ + A + D M + P+ + Y +++ + +
Sbjct: 471 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 530
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +MK +G P +V+Y ++I C+ + EA E
Sbjct: 531 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE------------------- 571
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN L + + + P+A +YN ++ A C+ I+ A + M K G
Sbjct: 572 IINSLSNHRLI----------------PDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 615
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
I RTY ++ L AGR E ++++M + P+ + + I+V +
Sbjct: 616 IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQN-NVVPSNAIHNIMVEAY 665
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 136/262 (51%), Gaps = 2/262 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A VF KM+ + P K+Y +L+ ++ ++ YREM++ G VVS I+I
Sbjct: 104 AIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIK 163
Query: 89 AHCSAKR-YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
A C K D A+ +F+EM C+P + + TLINGL +SEA + F + +++GF
Sbjct: 164 ALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFS 223
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
TY +++ C S +++A +++EM++ I PN TY ++ L K G + +A +
Sbjct: 224 ASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQL 283
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+ M +K P + TY ++ C ++ A+ I D M+ +G+ P +Y +I+ LC
Sbjct: 284 LEVMDKKHHL-PNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLC 342
Query: 268 HEDKLDDACKYFQEMLDIGIRP 289
+A + EM+ GI P
Sbjct: 343 AAGSYQEAANFIDEMVLGGISP 364
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 152/329 (46%), Gaps = 14/329 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M + G+ + N LI LCK++ V+ A +F +M R PD +Y L+ G +
Sbjct: 146 MRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLG 205
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
N+ E+++EM+ GF VV+Y +I+ C + DEA+ L EM+ + +P+ +
Sbjct: 206 NISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYS 265
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+L++GL S+A+Q K+ P TY+ ++ C ++ +A ++D MR
Sbjct: 266 SLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQ 325
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM-------FC 232
G+ PN Y ++ L AG +EA + M G P +++ + VRM C
Sbjct: 326 GLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLG-GISPNRASWSLHVRMHNMVVQGLC 384
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
N A +++ M+ R + + + L+ C L A + +EM+ G P
Sbjct: 385 NNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEG 444
Query: 293 LFSNLKQALRD-----EGMEETAVVLAQK 316
+++ + L D E E+ V L QK
Sbjct: 445 VWNVVIGGLWDRKKVREATEQLLVELQQK 473
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 2/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + F +I L A+ + ++MK+ + + + G+G+ L
Sbjct: 45 GFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDA 104
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ +M+ P +Y +++ A+ +REM S LI
Sbjct: 105 IRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKA 164
Query: 125 LGSEKR-LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L K + AL+ F + RG +P++ TY ++ C I++A + EM + G
Sbjct: 165 LCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSA 224
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY ++H L ++ +EA + + M R EP V TY ++ C AM++
Sbjct: 225 SVVTYTSLIHGLCQSNNLDEAIGLLEEMKRND-IEPNVFTYSSLMDGLCKGGHSSQAMQL 283
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ M + LP M YSTLIN LC E KL +A + M G++P L+ + L
Sbjct: 284 LEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCA 343
Query: 304 EGMEETA 310
G + A
Sbjct: 344 AGSYQEA 350
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 2/252 (0%)
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+GF D ++G++I+ + ++ A + M+ C + IF ++ G G R +
Sbjct: 44 NGFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLD 103
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A++ F + + P Y ++ + A EMR+ GI + + +I++
Sbjct: 104 AIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIK 163
Query: 194 HLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K T + A +F+ M + G +P TY ++ C + A ++ EM+ +G
Sbjct: 164 ALCKNKETVDSALRIFQEMPNR-GCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGF 222
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ Y++LI+ LC + LD+A +EM I P +S+L L G A+
Sbjct: 223 SASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQ 282
Query: 313 LAQKIDKLRKTP 324
L + +DK P
Sbjct: 283 LLEVMDKKHHLP 294
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 149/294 (50%), Gaps = 4/294 (1%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K+ PD + LI+ C V +A ++ D+M R PD+ +Y +L+ G ++ L
Sbjct: 10 KECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDE 69
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ M G +P+V+++ I++ + CS R+ +A +L EM C PS F LIN
Sbjct: 70 AIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILIN 129
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L + L A+ + G P + +YN ++ +C +++ A + ++ M G P
Sbjct: 130 FLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYP 189
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY+ +L L K G+ + A + ++S K G P + TY V+ + D A+ +
Sbjct: 190 DIVTYNTMLTALCKDGKVDAAVELLNQLSSK-GCSPVLITYNTVIDGLSKVGKTDQAVEL 248
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
EM+ +G+ P + YS+LI L E K+++A K+F ++ G++P ++++
Sbjct: 249 LHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSI 302
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 155/317 (48%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K ++ +N L++ +CK ++ A + + M P++ ++ I+L
Sbjct: 42 MGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGR 101
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G P VV++ I+IN C A+++ +M C P+ +
Sbjct: 102 WMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNP 161
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G EK++ A+Q+ RG P+ TYN ++ A C +++ A +++++ G
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY+ V+ L K G+T++A + M R G +P V TY ++ +V+ A
Sbjct: 222 CSPVLITYNTVIDGLSKVGKTDQAVELLHEM-RGKGLKPDVITYSSLIAGLSREGKVEEA 280
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +++ GV P Y++++ LC + D A + M+ G +P ++ L +
Sbjct: 281 IKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEG 340
Query: 301 LRDEGMEETAVVLAQKI 317
+ +EG+ + A+ L ++
Sbjct: 341 IANEGLAKEALELLNEL 357
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 143/294 (48%), Gaps = 1/294 (0%)
Query: 31 EVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAH 90
EV D+ ++ PD+ +YTIL+E + + ++ EM G +PDVV+Y +++N
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
C R DEA++ M + +P+ ++ + S R +A + + ++G P
Sbjct: 62 CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
T+N ++ C + A ++++M G PN+ +Y+ +LH K + + A +
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M + G P + TY ++ C + +VD A+ + +++ ++G PV+ Y+T+I+ L
Sbjct: 182 MVSR-GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
K D A + EM G++P +S+L L EG E A+ ++ P
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKP 294
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI+ LC+ + RA ++ +KM P+ SY LL G+ ++K
Sbjct: 112 MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKK 171
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G PD+V+Y M+ A C + D AVEL ++ + C P + T
Sbjct: 172 MDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 231
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + +A++ + + +G +P+ TY++++ ++ +A + ++ G
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG 291
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ ++ L KA +T+ A M K G +PT +Y I++ A
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISK-GCKPTEVSYTILIEGIANEGLAKEA 350
Query: 241 MRIWDEMKARGVL 253
+ + +E+ +RGV+
Sbjct: 351 LELLNELCSRGVV 363
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 2/225 (0%)
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L R++E C P + LI +E + +A++ + RG +P+ TYN +V C
Sbjct: 4 LDRQLEK-ECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
R+++A + ++ M G PN T++I+L + GR +A + M RK G P+V
Sbjct: 63 KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRK-GCSPSV 121
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
T+ I++ C + A+ I ++M G P Y+ L++ C E K+D A +Y +
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181
Query: 282 MLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
M+ G P ++ + AL +G + AV L ++ +P++
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVL 226
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 88/188 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N ++ LCK V+ A E+ +++ + P + +Y +++G +
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ EM+ G +PDV++Y +I + +EA++ F ++E KP+ + +++ G
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ A+ F +G +P +Y ++ +A +++E+ G+
Sbjct: 306 LCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKK 365
Query: 185 TRTYDIVL 192
+ +V+
Sbjct: 366 SSAEQVVV 373
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I+ LCK E A + KM++ + Y +++ + + + ++ EM
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PDV++Y MI++ C + R+ +A +L R+M P F LIN L E ++S
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + +G +RG P TYN+++ +C R+NDA RM+D M P+ T+ ++
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KA R + +F M R+ TV TY ++ FC +D A + + M + GV
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTV-TYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P + +++ SLC + +L A +++
Sbjct: 283 APNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 122/248 (49%), Gaps = 1/248 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ +K + +N +ID LCK H AQ +F +M + PD+ +Y+ +++ + +
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ R+M + PDVV++ +INA + EA E++ +M P+ + +
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + RL++A + + P+ T++ ++ YC + R+++ + EM + G
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I NT TY ++H + G + A + M G P T++ ++ C ++ A
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI-SSGVAPNYITFQSMLASLCSKKELRKA 305
Query: 241 MRIWDEMK 248
I ++++
Sbjct: 306 FAILEDLQ 313
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 129/293 (44%), Gaps = 38/293 (12%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
PD+ ++T L+ G + +L + M ++G +P YG +IN C + A+ L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
+ME T+ K I+ +I+ L + A F + +G P+ TY+ ++ ++C
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK---PGT-- 217
S R DA +++ +M + I P+ T+ +++ L+K G+ EA ++ M R+ P T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 218 -----------------------------EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
P V T+ ++ +C +VD M I+ EM
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
RG++ Y+TLI+ C LD A M+ G+ P F ++ +L
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 104/212 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ +ID+ C+S A+++ M +R+ +PD+ +++ L+ ++ +
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+Y +M G P ++Y MI+ C R ++A + M + +C P F TLING
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
KR+ ++ F + +RG TY ++ +C ++ A +++ M G+ PN
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPN 285
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
T+ +L L +A+++ + + + G
Sbjct: 286 YITFQSMLASLCSKKELRKAFAILEDLQKSEG 317
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 149/313 (47%), Gaps = 7/313 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQKNLLSMNEVYRE 70
N +D LCK H A E+F++ ++ D PD ++Y ILL GW + L + +++ E
Sbjct: 149 LNMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAE 208
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M+ G P VV+YG +I C +R D+A+ L EM + + ++ L R
Sbjct: 209 MRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGR 268
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+A + + G P T+N++V YC + A ++ M + GI P TRTY+
Sbjct: 269 FQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNY 328
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
K E + + +M G P TY ++V+M ++++ +++ EM+
Sbjct: 329 FFMTFAKNSDVESGMNFYSKMIGN-GYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTH 387
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G P + + LI+ LC + ++AC F++M GI P + L + L+ G+
Sbjct: 388 GFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGL---- 443
Query: 311 VVLAQKIDKLRKT 323
V L QK+ L ++
Sbjct: 444 VRLIQKLTNLMRS 456
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 114/268 (42%), Gaps = 17/268 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + + LI+ LC R ++A + D+M++ + ++ + ++ Q
Sbjct: 213 GVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDA 272
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V + G P++ ++ ++ +C A + + M P+ +
Sbjct: 273 HKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMT 332
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + F+ + G+ P+ TY +V + R+ +M+ EMR G P+
Sbjct: 333 FAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPD 392
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T +++H L + + EEA + F+ M ++ G P TY+ ++R
Sbjct: 393 LATSTMLIHLLCRRHQFEEACAEFEDMFKR-GIVPQYITYQKLMR--------------- 436
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKL 272
E+K G++ ++ + L+ S+ H KL
Sbjct: 437 -ELKRLGLVRLIQKLTNLMRSVPHSTKL 463
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 81/199 (40%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L N ++ L ++ + A +V +K P+I ++ L+ G+ + +
Sbjct: 244 MREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGD 303
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + V + M + G P +Y + + + +M P +
Sbjct: 304 LAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVL 363
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L RL +Q + + GFEP+ T ++ C + +A ++M K G
Sbjct: 364 LVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRG 423
Query: 181 IGPNTRTYDIVLHHLIKAG 199
I P TY ++ L + G
Sbjct: 424 IVPQYITYQKLMRELKRLG 442
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 162/318 (50%), Gaps = 5/318 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
KF + ++ FN L+ TLC+ + + A+ V+ +K F P+++++ ILL GW +
Sbjct: 172 KFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSM-FRPNLQTFNILLSGWKSSE--- 227
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ EM + G +PDVVSY +++ +C + D+A ++ +M + + ++I
Sbjct: 228 EAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSII 287
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GLG + +A + K+ G P+ YNA + +C + R+++A+ ++DEM G+
Sbjct: 288 GGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLS 347
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY++ + + A+++++RM G P + +VR+F + +MA+
Sbjct: 348 PNATTYNLFFRIFFWSNDLQSAWNLYRRM-MDTGCLPNTQSCLFLVRLFKKYEKEEMALE 406
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+W++M +G + + L + LC KL +A F +M+D G +P F +K +
Sbjct: 407 LWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRIKVLME 466
Query: 303 DEGMEETAVVLAQKIDKL 320
E L++K+D +
Sbjct: 467 LANKHEALQNLSKKMDDI 484
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 2/290 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + L+ K VE A + +M+ RR P + +YT L+ G G+
Sbjct: 257 MKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGR 316
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ VY+ M DG +PDVV +IN + R EAVELF EM NC P+ + T
Sbjct: 317 VEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNT 376
Query: 121 LINGLGSEKR-LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I L +K SEA + + KK G P + TY+ ++ +C + R+ A +++EM +
Sbjct: 377 IIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 436
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P Y +++ L KA R E A +F+ + G+ +V Y ++++ F + +
Sbjct: 437 GFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSS-SVRVYAVMIKHFGKCGRFNE 495
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
AM +++EMK G +P ++ Y+ LI + D +D+A F+ M + G P
Sbjct: 496 AMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNP 545
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 153/314 (48%), Gaps = 6/314 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K ++ N LI+ L +S ++ A E+F++M+ P++ +Y +++ + K
Sbjct: 327 MLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKA 386
Query: 61 LLSMNEVYRE-MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
S + E MK DG P +Y I+I+ C R ++A+ L EM+ P P +C
Sbjct: 387 PPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYC 446
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LIN LG KR A + F + K+ Y ++ + R N+A + +EM+K
Sbjct: 447 SLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKL 506
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ Y+ ++ +++A +EA+S+F+ M G P ++++ I++
Sbjct: 507 GCIPDVYAYNALITGMVRADMMDEAFSLFRTMEEN-GCNPDINSHNIILNGLARTGGPKR 565
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
AM ++ +MK+ + P Y+T++ L ++A K +EM G +S++ +
Sbjct: 566 AMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILE 625
Query: 300 AL----RDEGMEET 309
A+ D M E+
Sbjct: 626 AVGKVDEDRNMAES 639
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 136/272 (50%), Gaps = 3/272 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N +I L + H E+ E++++M + PD +Y+ L+ +G+ S ++ EM
Sbjct: 198 YNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEM 257
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
K++G +P Y ++ + + +EA+ L EM C P+ + + LI GLG R+
Sbjct: 258 KENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRV 317
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A + K G +P+ N ++ S R+ +A + +EMR PN TY+ +
Sbjct: 318 EDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTI 377
Query: 192 LHHLIK-AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+ L + EA S +RM +K G P+ TY I++ FC +V+ A+ + +EM +
Sbjct: 378 IKSLFEDKAPPSEASSWLERM-KKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 436
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
G P Y +LINSL + + A + FQE+
Sbjct: 437 GFPPCPAAYCSLINSLGKAKRYEAANELFQEL 468
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 6/258 (2%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
K FE D +Y +I + E ++M + C P ++ LG K +
Sbjct: 117 KKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMV 176
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG---PNTRTY 188
++AL F Q K R P A TYN+V+ + + +EM C G P+T TY
Sbjct: 177 NKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEM--CSEGHCFPDTVTY 234
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
++ K R + A +F M ++ G +PT Y ++ ++ +V+ A+ + EM+
Sbjct: 235 SALISAFGKLNRDDSAVRLFDEM-KENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMR 293
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
R +P ++ Y+ LI L +++DA ++ ML G +P L +NL L +
Sbjct: 294 MRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLK 353
Query: 309 TAVVLAQKIDKLRKTPLV 326
AV L +++ L TP V
Sbjct: 354 EAVELFEEMRLLNCTPNV 371
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 162/318 (50%), Gaps = 5/318 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
KF + ++ FN L+ TLC+ + + A+ V+ +K F P+++++ ILL GW +
Sbjct: 172 KFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSM-FRPNLQTFNILLSGWKSSE--- 227
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ EM + G +PDVVSY +++ +C + D+A ++ +M + + ++I
Sbjct: 228 EAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKAFKVVGKMRDEDIPADVITYTSII 287
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GLG + +A + K+ G P+ YNA + +C + R+++A+ ++DEM G+
Sbjct: 288 GGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRNFCIAKRLHEAFDLLDEMVNKGLS 347
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY++ + + A+++++RM G P + +VR+F + +MA+
Sbjct: 348 PNATTYNLFFRIFFWSNDLQSAWNLYRRM-MDTGCLPNTQSCLFLVRLFKKYEKEEMALE 406
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+W++M +G + + L + LC KL +A F +M+D G +P F +K +
Sbjct: 407 LWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFLQMVDKGHKPSYTSFKRIKVLME 466
Query: 303 DEGMEETAVVLAQKIDKL 320
E L++K+D +
Sbjct: 467 LANKHEALQNLSKKMDDI 484
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 149/313 (47%), Gaps = 7/313 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQKNLLSMNEVYRE 70
N +D LCK H A E+F++ ++ D PD ++Y ILL GW + L + +++ E
Sbjct: 149 LNMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAE 208
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M+ G P VV+YG +I C +R D+A+ L EM + + ++ L R
Sbjct: 209 MRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGR 268
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+A + + G P T+N++V YC + A ++ M + GI P TRTY+
Sbjct: 269 FQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNY 328
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
K E + + +M G P TY ++V+M ++++ +++ EM+
Sbjct: 329 FFMTFAKNSDVESGMNFYSKMIGN-GYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTH 387
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G P + + LI+ LC + ++AC F++M GI P + L + L+ G+
Sbjct: 388 GFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGL---- 443
Query: 311 VVLAQKIDKLRKT 323
V L QK+ L ++
Sbjct: 444 VHLIQKLTNLMRS 456
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 114/268 (42%), Gaps = 17/268 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + + LI+ LC R ++A + D+M++ + ++ + ++ Q
Sbjct: 213 GVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDA 272
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V + G P++ ++ ++ +C A + + M P+ +
Sbjct: 273 HKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMT 332
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + F+ + G+ P+ TY +V + R+ +M+ EMR G P+
Sbjct: 333 FAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPD 392
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T +++H L + + EEA + F+ M ++ G P TY+ ++R
Sbjct: 393 LATSTMLIHLLCRRHQFEEACAEFEDMFKR-GIVPQYITYQKLMR--------------- 436
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKL 272
E+K G++ ++ + L+ S+ H KL
Sbjct: 437 -ELKRLGLVHLIQKLTNLMRSVPHSTKL 463
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 81/199 (40%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L N ++ L ++ + A +V +K P+I ++ L+ G+ + +
Sbjct: 244 MREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGD 303
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + V + M + G P +Y + + + +M P +
Sbjct: 304 LAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVL 363
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L RL +Q + + GFEP+ T ++ C + +A ++M K G
Sbjct: 364 LVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRG 423
Query: 181 IGPNTRTYDIVLHHLIKAG 199
I P TY ++ L + G
Sbjct: 424 IVPQYITYQKLMRELKRLG 442
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ LCK+ +E A+ + ++M R PDI ++ L+ L ++ R++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV ++ I+INA C A+ LF EM+ + C P + TLI+ L S +L
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL + G TYN ++ C MRI +A + D+M GI N T++ ++
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K + ++A+ + +M + G +P TY ++ +C + A I + M A G
Sbjct: 504 DGLCKDKKIDDAFELINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ Y TLIN LC + A K + M G+RP + ++ + Q+L
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 145/286 (50%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ FN L+ LC++ V A + ++M R PD ++T L++G+ ++ +
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + V M + G V+ ++IN +C R ++A+ ++ A +P + T
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+NGL + AL+ + G +P+ TYN VV C + ++ +A ++++M G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++ ++ L R EEA + ++++ K G P V T+ I++ C +A
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLA 410
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+R+++EMK G P Y+TLI++LC KL A ++M G
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FG++ + +N L++ L + ++ + V+ +M R PD+ ++ L++ + + +
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ EM G PD ++ ++ + A+ + M C + LIN
Sbjct: 200 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G R+ +AL + Q GFEP+ TYN V C + + A ++MD M + G P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY+IV++ L K G+ EEA + +M + G P ++T+ ++ C +++ A+ +
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++ +GV P ++ ++ LIN+LC A + F+EM + G P ++ L
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 6/319 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ FN LI+ LCK A +F++MK PD +Y L++ L
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++M+ G ++Y +I+ C R +EA E+F +M+ + F TLI+G
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +K++ +A + Q G +P TYN+++ YC I A +++ M G +
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ L KAGRT+ A V + M R G PT Y V++ + A+ ++
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGM-RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK-LDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM G P Y + LC + +A + EM+D G P F L + L +
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLN 684
Query: 304 EGMEETAV----VLAQKID 318
GM++ + ++ +K+D
Sbjct: 685 LGMDDYFIRAIEIIMEKVD 703
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 130/281 (46%), Gaps = 1/281 (0%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
D Y LL + + + VY EM G +PDVV++ ++ A C A + AV +
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 204
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
EM + P F TL+ G E + AL+ + + G T N ++ YC
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
R+ DA + + G P+ TY+ ++ L + A V M ++ G +P V T
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE-GHDPDVFT 323
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y IVV C N Q++ A I ++M RG LP + ++TLI +LC ++L++A +++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G+ P F+ L AL G A+ L +++ TP
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 2/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + +N +ID LCK +E A+EVFD+M + + ++ L++G + K
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M +G +P+ ++Y ++ +C +A ++ M A + + T
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL R AL+ + +G P YN V+ + I DA + EM + G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIV 227
P+ TY IV L + G +EA+ M K G P S++ ++
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRML 678
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 5/277 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID LC + +A ++ M+ +Y +++G ++ + EV+ +M
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + +++ +I+ C K+ D+A EL +M + +P+ + +++ + +
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A GFE + TY ++ C + R A +++ MR G+ P + Y+ VL
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ-VDMAMRIWDEMKARG 251
L + +A S+F+ M+ + G P TY+IV R C + A EM +G
Sbjct: 609 QSLFRRNNIRDALSLFREMA-EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667
Query: 252 VLPVMHMYSTLINSLCH---EDKLDDACKYFQEMLDI 285
+P + L L + +D A + E +D+
Sbjct: 668 FIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 704
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G + Y ++ + +++ + ++ EM ARG+ P + ++TL+ +LC ++ A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+EM G+ P F+ L Q +EG E A+
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 1/264 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + +N LI L K V+ A E+ + M ++ PD ++Y I+++
Sbjct: 143 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGR 202
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ MK PDVV+Y ++N +R DEA +LF EM+A C P F T
Sbjct: 203 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGT 262
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ +AL+ + K G P + YNA++ +C S +++ Y + +M +C
Sbjct: 263 LIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECS 322
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P++ TY I++ + G T A + + M R+ G P ++TY +++R QV+ A
Sbjct: 323 CFPDSITYTILVLGFSRRGHTSMAMELLQEMVRE-GHTPALATYNVLIRSLSMAGQVEDA 381
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN 264
++ EM A+G P M YS L N
Sbjct: 382 YTLFKEMIAKGFNPDMQTYSALPN 405
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 1/285 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L+D L K+ +A EVF M+K PD Y +L+ G+Q + E+ +M
Sbjct: 120 YSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN 179
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD +Y I+I+ S RY++A F M+ P + TL+NGL +R
Sbjct: 180 RKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTD 239
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + + P+ T+ ++ + R+ DA + K G PN+ Y+ ++
Sbjct: 240 EACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALI 299
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
++G+ ++ Y +F+ M + P TY I+V F MAM + EM G
Sbjct: 300 SGFCRSGQVDKGYELFQDMI-ECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGH 358
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P + Y+ LI SL +++DA F+EM+ G P Q +S L
Sbjct: 359 TPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N LI CK+ +RA ++F ++K+ P+ S+ L+ + V++EM
Sbjct: 14 YNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEM 73
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G + DV +I+ C +A L M A + L++ LG R
Sbjct: 74 LGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRA 133
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
++AL+ F +K G P+ YN ++ ++++A ++++M + GI P+ RTY+IV
Sbjct: 134 AKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIV 193
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L GR E+AYS F M R+ + P V TY ++ + D A ++DEM+A
Sbjct: 194 IDVLSSCGRYEKAYSFFGMMKRRKHS-PDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 252
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+P + + TLI++L +++DA + ++ +G P +++ L
Sbjct: 253 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNAL 298
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 137/312 (43%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L+ LCK A VF +M D+ L+ + L + M
Sbjct: 50 FDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMT 109
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
F DV +Y +++A A R +A+E+F M+ C P ++ LI+ LG + ++
Sbjct: 110 AHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVD 169
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL+ ++G P+ TYN V+ R AY M++ P+ TY+ +L
Sbjct: 170 EALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLL 229
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K RT+EA +F M P ++T+ ++ +++ A+ + G
Sbjct: 230 NGLKKLRRTDEACDLFDEMQANK-CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGH 288
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P ++Y+ LI+ C ++D + FQ+M++ P ++ L G A+
Sbjct: 289 VPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAME 348
Query: 313 LAQKIDKLRKTP 324
L Q++ + TP
Sbjct: 349 LLQEMVREGHTP 360
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%), Gaps = 2/283 (0%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVE 101
PD+ +Y L+ G+ + + +++R +K +G +P+ VS+ ++ C R +A+
Sbjct: 9 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
+F+EM + ++ TLI+ L +A + F + TY+ ++ A
Sbjct: 69 VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ R A + M+K G P+T Y++++ L K G+ +EA + + M+RK G P
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK-GIMPDC 187
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
TY IV+ + + + A + MK R P + Y+TL+N L + D+AC F E
Sbjct: 188 RTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDE 247
Query: 282 MLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
M P F L L G E A+ + ++ K+ P
Sbjct: 248 MQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVP 290
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 2/219 (0%)
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMR 165
E +C P + TLI G AL F + K+ G +P A +++ +V C R
Sbjct: 3 ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 62
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
DA + EM G+ + + ++H + G +A + M+ V TY
Sbjct: 63 ATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLD-VFTYS 121
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
++ + A+ ++ M+ G +P +Y+ LI+ L + K+D+A + ++M
Sbjct: 122 YLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 181
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
GI P + ++ + L G E A + + + +P
Sbjct: 182 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSP 220
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 2/285 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
KFG+ + N LI LCK VE A++VFD+M P++ +YT +L G+ + ++
Sbjct: 184 SKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDM 243
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ V+ E+ D G+ PD +Y I+++ + R+ +AV++ EME +P+ + +
Sbjct: 244 IGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVI 303
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I G E++ EAL ++ + P + V+ C R+ +A +M +++ K
Sbjct: 304 ILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNC 363
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ ++H L K G EA +F R GT ++ TY ++ C ++ A
Sbjct: 364 TPDNAITSTLIHWLCKEGNIWEARKLFNEFER--GTISSLLTYNTLIAGMCEMGELCEAA 421
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
R+WD+M +G +P Y+ LI K + K +EMLD G
Sbjct: 422 RLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKG 466
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 155/322 (48%), Gaps = 6/322 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQ 58
+ FG+++ + N L++ L ++ +F K K +F P++ + IL++ ++
Sbjct: 147 IQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLF-KYSKSKFGVVPNVFTCNILIKALCKK 205
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ +V+ EM G P+VV+Y ++ + S A +F E+ P +
Sbjct: 206 NDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTY 265
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L++G + R ++A++ + ++ G EP TY ++ YC + +A ++++M +
Sbjct: 266 TILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLE 325
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
PN+ V+ L GR +EA +++++ +K T P + ++ C +
Sbjct: 326 KKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCT-PDNAITSTLIHWLCKEGNIW 384
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++++E + RG + + Y+TLI +C +L +A + + +ML+ G P ++ L
Sbjct: 385 EARKLFNEFE-RGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLI 443
Query: 299 QALRDEG-MEETAVVLAQKIDK 319
+ G +E V+ + +DK
Sbjct: 444 KGFLKVGKAKEVIKVVEEMLDK 465
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 133/314 (42%), Gaps = 4/314 (1%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
NRL+ + + ++++ A ++F K F + +Y ++ + + + + E+
Sbjct: 53 NRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLEL 112
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+D G + +I ++ A R A++ F ++ + S TL+N L R
Sbjct: 113 QDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRF 172
Query: 132 SEALQFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
S F SK K G P T N ++ A C + A ++ DEM GI PN TY
Sbjct: 173 SSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTT 232
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L + G A VF + G P +TY I++ + + A+++ DEM+
Sbjct: 233 ILGGYVSRGDMIGAKRVFGELFDH-GWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEEN 291
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
GV P Y +I C E K +A +ML+ P L + L EG + A
Sbjct: 292 GVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEA 351
Query: 311 VVLAQKIDKLRKTP 324
+ +K+ K TP
Sbjct: 352 CKMWEKLLKKNCTP 365
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ LCK+ +E A+ + ++M R PDI ++ L+ L ++ R++
Sbjct: 232 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 291
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV ++ I+INA C A+ LF EM+ + C P + TLI+ L S +L
Sbjct: 292 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 351
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL + G TYN ++ C MRI +A + D+M GI N T++ ++
Sbjct: 352 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 411
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K + ++A+ + +M + G +P TY ++ +C + A I + M A G
Sbjct: 412 DGLCKDKKIDDAFELINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 470
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ Y TLIN LC + A K + M G+RP + ++ + Q+L
Sbjct: 471 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 519
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 145/286 (50%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ FN L+ LC++ V A + ++M R PD ++T L++G+ ++ +
Sbjct: 80 MGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGS 139
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + V M + G V+ ++IN +C R ++A+ ++ A +P + T
Sbjct: 140 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 199
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+NGL + AL+ + G +P+ TYN VV C + ++ +A ++++M G
Sbjct: 200 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 259
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++ ++ L R EEA + ++++ K G P V T+ I++ C +A
Sbjct: 260 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLA 318
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+R+++EMK G P Y+TLI++LC KL A ++M G
Sbjct: 319 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FG++ + +N L++ L + ++ + V+ +M R PD+ ++ L++ + + +
Sbjct: 48 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ EM G PD ++ ++ + A+ + M C + LIN
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G R+ +AL + Q GFEP+ TYN V C + + A ++MD M + G P
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY+IV++ L K G+ EEA + +M + G P ++T+ ++ C +++ A+ +
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDL 286
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++ +GV P ++ ++ LIN+LC A + F+EM + G P ++ L
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 6/319 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ FN LI+ LCK A +F++MK PD +Y L++ L
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 353
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++M+ G ++Y +I+ C R +EA E+F +M+ + F TLI+G
Sbjct: 354 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 413
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +K++ +A + Q G +P TYN+++ YC I A +++ M G +
Sbjct: 414 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 473
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ L KAGRT+ A V + M R G PT Y V++ + A+ ++
Sbjct: 474 VVTYGTLINGLCKAGRTQVALKVLRGM-RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 532
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK-LDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM G P Y + LC + +A + EM+D G P F L + L +
Sbjct: 533 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLN 592
Query: 304 EGMEETAV----VLAQKID 318
GM++ + ++ +K+D
Sbjct: 593 LGMDDYFIRAIEIIMEKVD 611
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 130/281 (46%), Gaps = 1/281 (0%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
D Y LL + + + VY EM G +PDVV++ ++ A C A + AV +
Sbjct: 53 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLML 112
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
EM + P F TL+ G E + AL+ + + G T N ++ YC
Sbjct: 113 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 172
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
R+ DA + + G P+ TY+ ++ L + A V M ++ G +P V T
Sbjct: 173 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE-GHDPDVFT 231
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y IVV C N Q++ A I ++M RG LP + ++TLI +LC ++L++A +++
Sbjct: 232 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 291
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G+ P F+ L AL G A+ L +++ TP
Sbjct: 292 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 2/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + +N +ID LCK +E A+EVFD+M + + ++ L++G + K
Sbjct: 360 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 419
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M +G +P+ ++Y ++ +C +A ++ M A + + T
Sbjct: 420 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 479
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL R AL+ + +G P YN V+ + I DA + EM + G
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIV 227
P+ TY IV L + G +EA+ M K G P S++ ++
Sbjct: 540 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRML 586
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G + Y ++ + +++ + ++ EM ARG+ P + ++TL+ +LC ++ A
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+EM G+ P F+ L Q +EG E A+
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 144
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L +N +I+ LCK +V A+ + K+ + PD +YT ++ G ++ +L S
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V+ +M +G EP+ V+Y +IN C + R +EA +L REM P+ H I
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +A + F K +G EP TY A++ C S + A + M + G+ PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+ +++ L++ R + A+ V M R G P + TY +++ +C AM +
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRN-GCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ M RG + Y+T+I C A + M D G +P
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 9/293 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----G 56
M + G+ +N LI+ L ++R ++ A V + M + P+I +Y +++G+
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+K +L MN M G ++V+Y +I +C + A+ + M CKP
Sbjct: 441 PKKAMLVMNN----MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ LI G ++ A F + G P TY A++ YC +++ A +++ M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
++ G PN +TY++++H L K A + K M + G P V TY ++ C N
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE-GIFPNVVTYTAMIDGLCKNGS 615
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+A+ ++++M +G LP + YS+LI +L E K+++A F E+ G+ P
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 668
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 1/274 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L +N +I C S + A + D M+ PD SYT L+ G+ +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S ++ EM DDG P+ V+Y +I+ +C ++ D A L M+ + C+P+ +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + S A + + G P TY A++ C + + A M ++M + G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ L + G+ EEA ++F + R G P TY ++ + + +V+ A
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERH-GLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
M G P + Y LI L +E L D
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N +I C ++A V + M +R ++ +Y +++G+ N
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S + M+D G +PD SY +I C + + A LF EM P+ +
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +++L A K+ G P TYN ++ + A + M + G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY ++ L K G T A +F +M + G P + TY ++R +V+ A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ-GCLPNLLTYSSLIRALGQEGKVEEA 654
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ E++ G++P Y +I + K++ A + M+ G +P + L +
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714
Query: 301 LRDE 304
L++E
Sbjct: 715 LKNE 718
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 139/316 (43%), Gaps = 42/316 (13%)
Query: 4 FGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
FGL E+ D + LID CK ++ A + + MK+ P++++Y +L+ G
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+Q N E+ + M ++G P+VV+Y MI+ C A+E+F +M C P+
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +LI LG E ++ EA F + ++ G P+ TY ++ AY S ++ A+ +
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS------TYEIVV 228
M K G P TY + LIK G E +R++ P P S + V
Sbjct: 695 RMIKAGCQPTLWTYGV----LIK-GLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 749
Query: 229 RMFCYNAQVDMAMRI---------------WDE-------MKARGVLPVMHMYSTLINSL 266
M A++D + + W E M ++G+ P Y++L+ SL
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809
Query: 267 CHEDKLDDACKYFQEM 282
+D A F+ M
Sbjct: 810 LRVRNVDLAMGVFKHM 825
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 135/345 (39%), Gaps = 40/345 (11%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGF 76
I LC E A +F MK + +P++ +YT L+ G L ++ M DG
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING---LGSEKRLSE 133
P+ V+Y +IN +R A + M C P+ + +I G LG K+
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK--- 443
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+ +RG TYN ++ YC S A R++D MR G P+ +Y ++
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503
Query: 194 HLIKAGRTEEAYSVFKRMS----------------------------------RKPGTEP 219
K + E A+ +F M ++ G P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY +++ A + M G+ P + Y+ +I+ LC A + F
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+M++ G P +S+L +AL EG E A L ++++ P
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 668
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 2/270 (0%)
Query: 21 CKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPD 79
C S+ + R D + + + +Y+ LL + ++ + Y M +G +P+
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
++ Y +INA C +A + +++ + P + ++I G + L ALQ F
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
Q K G EP TY+ ++ C S R+N+A+ ++ EM GI P T + L G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
E+A+ +F M K G EP V TY ++ C + + +A+ ++ M GV P Y
Sbjct: 335 CYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ LIN L ++ A M G P
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSP 423
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P YNAV+ A C + DA +M ++ + + P+T TY ++ + + A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
VF +M+ K G EP TY ++ C + +V+ A + EM G+LP H + I
Sbjct: 270 LQVFNQMA-KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+LC +DA + F +M + G P ++ L L G+ + A+ L ++ +
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 383
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV---GAYCWSMRINDAY-RMMDEM 176
LI S++ ++ + F + G Y+A++ + + D Y RM+ E
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE- 209
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ PN Y+ V++ L K G +A ++ K++ P TY ++ C
Sbjct: 210 ---GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESE-MSPDTFTYTSMILGHCRKHD 265
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+D A++++++M G P YSTLIN LC ++++A +EM+ GI P +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 297 LKQALRDEGMEETA 310
AL D G E A
Sbjct: 326 PIIALCDMGCYEDA 339
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ LCK+ +E A+ + ++M R PDI ++ L+ L ++ R++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV ++ I+INA C A+ LF EM+ + C P + TLI+ L S +L
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLG 443
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL + G TYN ++ C MRI +A + D+M GI N T++ ++
Sbjct: 444 KALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLI 503
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K + ++A+ + +M + G +P TY ++ +C + A I + M A G
Sbjct: 504 DGLCKDKKIDDAFELINQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ Y TLIN LC + A K + M G+RP + ++ + Q+L
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL 611
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 145/286 (50%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ FN L+ LC++ V A + ++M R PD ++T L++G+ ++ +
Sbjct: 172 MGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGS 231
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + V M + G V+ ++IN +C R ++A+ ++ A +P + T
Sbjct: 232 IEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNT 291
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+NGL + AL+ + G +P+ TYN VV C + ++ +A ++++M G
Sbjct: 292 FVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG 351
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++ ++ L R EEA + ++++ K G P V T+ I++ C +A
Sbjct: 352 CLPDITTFNTLIAALCTGNRLEEALDLARQVTVK-GVSPDVYTFNILINALCKVGDPHLA 410
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+R+++EMK G P Y+TLI++LC KL A ++M G
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FG++ + +N L++ L + ++ + V+ +M R PD+ ++ L++ + + +
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 199
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ EM G PD ++ ++ + A+ + M C + LIN
Sbjct: 200 AVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 259
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G R+ +AL + Q GFEP+ TYN V C + + A ++MD M + G P
Sbjct: 260 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 319
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY+IV++ L K G+ EEA + +M + G P ++T+ ++ C +++ A+ +
Sbjct: 320 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++ +GV P ++ ++ LIN+LC A + F+EM + G P ++ L
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 6/319 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ FN LI+ LCK A +F++MK PD +Y L++ L
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKA 445
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++M+ G ++Y +I+ C R +EA E+F +M+ + F TLI+G
Sbjct: 446 LDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDG 505
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +K++ +A + Q G +P TYN+++ YC I A +++ M G +
Sbjct: 506 LCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVD 565
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ L KAGRT+ A V + M R G PT Y V++ + A+ ++
Sbjct: 566 VVTYGTLINGLCKAGRTQVALKVLRGM-RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDK-LDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM G P Y + LC + +A + EM+D G P F L + L +
Sbjct: 625 REMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLN 684
Query: 304 EGMEETAV----VLAQKID 318
GM++ + ++ +K+D
Sbjct: 685 LGMDDYFIRAIEIIMEKVD 703
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 130/281 (46%), Gaps = 1/281 (0%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
D Y LL + + + VY EM G +PDVV++ ++ A C A + AV +
Sbjct: 145 DTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIML 204
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
EM + P F TL+ G E + AL+ + + G T N ++ YC
Sbjct: 205 EEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKL 264
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
R+ DA + + G P+ TY+ ++ L + A V M ++ G +P V T
Sbjct: 265 GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE-GHDPDVFT 323
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y IVV C N Q++ A I ++M RG LP + ++TLI +LC ++L++A +++
Sbjct: 324 YNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
G+ P F+ L AL G A+ L +++ TP
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 424
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 2/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + +N +ID LCK +E A+EVFD+M + + ++ L++G + K
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ +M +G +P+ ++Y ++ +C +A ++ M A + + T
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL R AL+ + +G P YN V+ + I DA + EM + G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIV 227
P+ TY IV L + G +EA+ M K G P S++ ++
Sbjct: 632 EPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK-GFIPEFSSFRML 678
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 123/277 (44%), Gaps = 5/277 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID LC + +A ++ M+ +Y +++G ++ + EV+ +M
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + +++ +I+ C K+ D+A EL +M + +P+ + +++ + +
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A GFE + TY ++ C + R A +++ MR G+ P + Y+ VL
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVL 608
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ-VDMAMRIWDEMKARG 251
L + +A S+F+ M+ + G P TY+IV R C + A EM +G
Sbjct: 609 QSLFRRNNIRDALSLFREMA-EVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667
Query: 252 VLPVMHMYSTLINSLCH---EDKLDDACKYFQEMLDI 285
+P + L L + +D A + E +D+
Sbjct: 668 FIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 704
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G + Y ++ + +++ + ++ EM ARG+ P + ++TL+ +LC ++ A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+EM G+ P F+ L Q +EG E A+
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 135/269 (50%), Gaps = 20/269 (7%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
+K ++ FN L+D LCK +++A+ V M K+ DPD+ +Y L++G+ K
Sbjct: 184 NIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKA 243
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G PDV SY +MIN C K DEAV L +EM + + P+ + +LI+G
Sbjct: 244 TFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDG 303
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ +A + RG + TYN+++ A C + +++ A ++ +++ GI P+
Sbjct: 304 LHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPD 363
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRK--------------------PGTEPTVSTY 224
TY I++ L K GR ++A V++ + K G P T+
Sbjct: 364 IYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTF 423
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
EI++R N D A+ + EM ARG+L
Sbjct: 424 EILIRALFENDMNDKAVELLREMIARGLL 452
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 57/369 (15%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LID LCK+ A +V + P++ Y+ ++ + K ++
Sbjct: 79 GFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDA 138
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y +M PDV++Y ++ R EAV LF +M N KP + F L++G
Sbjct: 139 FDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDG 198
Query: 125 LGSE-----------------------------------KRLSEALQFFGQSKKRGFEPE 149
L E K+ ++A F +RG P+
Sbjct: 199 LCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPD 258
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+Y+ ++ C + +++A ++ EM + PNT TY ++ L K+GR +A+ +
Sbjct: 259 VHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVN 318
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M + G V TY ++ C N QVD A+ + ++K +G+ P ++ Y+ L++ LC
Sbjct: 319 EMHNR-GQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKN 377
Query: 270 DKLDDACKYFQEML---------------------DIGIRPPGQLFSNLKQALRDEGMEE 308
+L DA + +Q +L D G P F L +AL + M +
Sbjct: 378 GRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMND 437
Query: 309 TAVVLAQKI 317
AV L +++
Sbjct: 438 KAVELLREM 446
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 146/323 (45%), Gaps = 7/323 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHV---ERAQEVF---DKMKKRRFDPDIKSYTILLEG 54
M+ G++ +L + N L++ C V ++ +E D + + F + SY L++G
Sbjct: 34 MELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDG 93
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ + +V R + +P+VV Y +I + C K +A +L+ +M P
Sbjct: 94 LCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPD 153
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ TL+ G RL EA+ F Q + +P+ T+N +V C + A ++
Sbjct: 154 VITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLA 213
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M K + P+ TY+ ++ + +A VF M+R+ G P V +Y +++ C
Sbjct: 214 VMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARR-GVTPDVHSYSVMINGLCKT 272
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
VD A+ + EM ++ + P YS+LI+ L ++ DA EM + G +
Sbjct: 273 KMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITY 332
Query: 295 SNLKQALRDEGMEETAVVLAQKI 317
++L AL + A+ L KI
Sbjct: 333 NSLLDALCKNHQVDKAITLLTKI 355
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 116/278 (41%), Gaps = 42/278 (15%)
Query: 69 REMKDDGFEPDVVSYGIMINAH-------------------------------------- 90
+M+ G + D+V+ I++N
Sbjct: 32 HQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQVSYGTLI 91
Query: 91 ---CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
C A A+++ R ++ +P+ ++ T+I L +K + +A + Q +
Sbjct: 92 DGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRIS 151
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P+ TYN ++ R+ +A + ++M I P+ T++I++ L K G ++A +V
Sbjct: 152 PDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNV 211
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
M K +P V TY ++ + Q + A +++ M RGV P +H YS +IN LC
Sbjct: 212 LAVMI-KQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLC 270
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+D+A +EM + P +S+L L G
Sbjct: 271 KTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSG 308
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L +N +I+ LCK +V A+ + K+ + PD +YT ++ G ++ +L S
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V+ +M +G EP+ V+Y +IN C + R +EA +L REM P+ H I
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +A + F K +G EP TY A++ C S + A + M + G+ PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 389
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+ +++ L++ R + A+ V M R G P + TY +++ +C AM +
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRN-GCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ M RG + Y+T+I C A + M D G +P
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 149/314 (47%), Gaps = 9/314 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----G 56
M + G+ +N LI+ L ++R ++ A V + M + P+I +Y +++G+
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+K +L MN M G ++V+Y +I +C + A+ + M CKP
Sbjct: 441 PKKAMLVMNN----MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ LI G ++ A F + G P TY A++ YC +++ A +++ M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
++ G PN +TY++++H L K A + K M + G P V TY ++ C N
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE-GIFPNVVTYTAMIDGLCKNGS 615
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+A+ ++++M +G LP + YS+LI +L E K+++A F E+ G+ P +
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675
Query: 297 LKQALRDEGMEETA 310
+ +A G E A
Sbjct: 676 MIEAYIMSGKVEHA 689
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 1/274 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L +N +I C S + A + D M+ PD SYT L+ G+ +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S ++ EM DDG P+ V+Y +I+ +C ++ D A L M+ + C+P+ +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + S A + + G P TY A++ C + + A M ++M + G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ L + G+ EEA ++F + R G P TY ++ + + +V+ A
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERH-GLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
M G P + Y LI L +E L D
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N +I C ++A V + M +R ++ +Y +++G+ N
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S + M+D G +PD SY +I C + + A LF EM P+ +
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +++L A K+ G P TYN ++ + A + M + G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY ++ L K G T A +F +M + G P + TY ++R +V+ A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ-GCLPNLLTYSSLIRALGQEGKVEEA 654
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ E++ G++P Y +I + K++ A + M+ G +P + L +
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714
Query: 301 LRDE 304
L++E
Sbjct: 715 LKNE 718
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 139/316 (43%), Gaps = 42/316 (13%)
Query: 4 FGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
FGL E+ D + LID CK ++ A + + MK+ P++++Y +L+ G
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+Q N E+ + M ++G P+VV+Y MI+ C A+E+F +M C P+
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +LI LG E ++ EA F + ++ G P+ TY ++ AY S ++ A+ +
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS------TYEIVV 228
M K G P TY + LIK G E +R++ P P S + V
Sbjct: 695 RMIKAGCQPTLWTYGV----LIK-GLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 749
Query: 229 RMFCYNAQVDMAMRI---------------WDE-------MKARGVLPVMHMYSTLINSL 266
M A++D + + W E M ++G+ P Y++L+ SL
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809
Query: 267 CHEDKLDDACKYFQEM 282
+D A F+ M
Sbjct: 810 LRVRNVDLAMGVFKHM 825
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 135/345 (39%), Gaps = 40/345 (11%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGF 76
I LC E A +F MK + +P++ +YT L+ G L ++ M DG
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING---LGSEKRLSE 133
P+ V+Y +IN +R A + M C P+ + +I G LG K+
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK--- 443
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+ +RG TYN ++ YC S A R++D MR G P+ +Y ++
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503
Query: 194 HLIKAGRTEEAYSVFKRMS----------------------------------RKPGTEP 219
K + E A+ +F M ++ G P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY +++ A + M G+ P + Y+ +I+ LC A + F
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+M++ G P +S+L +AL EG E A L ++++ P
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 668
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 2/270 (0%)
Query: 21 CKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPD 79
C S+ + R D + + + +Y+ LL + ++ + Y M +G +P+
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
++ Y +INA C +A + +++ + P + ++I G + L ALQ F
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
Q K G EP TY+ ++ C S R+N+A+ ++ EM GI P T + L G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
E+A+ +F M K G EP V TY ++ C + + +A+ ++ M GV P Y
Sbjct: 335 CYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ LIN L ++ A M G P
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSP 423
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P YNAV+ A C + DA +M ++ + + P+T TY ++ + + A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
VF +M+ K G EP TY ++ C + +V+ A + EM G+LP H + I
Sbjct: 270 LQVFNQMA-KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+LC +DA + F +M + G P ++ L L G+ + A+ L ++ +
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 383
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV---GAYCWSMRINDAY-RMMDEM 176
LI S++ ++ + F + G Y+A++ + + D Y RM+ E
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE- 209
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ PN Y+ V++ L K G +A ++ K++ P TY ++ C
Sbjct: 210 ---GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESE-MSPDTFTYTSMILGHCRKHD 265
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+D A++++++M G P YSTLIN LC ++++A +EM+ GI P +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 297 LKQALRDEGMEETA 310
AL D G E A
Sbjct: 326 PIIALCDMGCYEDA 339
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 148/297 (49%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N L+ LCK+ A+++FD M KR P+ +Y LL G+ + +L+ M
Sbjct: 303 GVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKM 362
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G +PD + I+I + + D+A+ LF +M P + +++
Sbjct: 363 HHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDA 422
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ +A+ FG+ G P+A + ++ C + + A + EM GI PN
Sbjct: 423 LCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPN 482
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++ +L+HL K G A ++F M R + V TY ++ +C + +VD A ++
Sbjct: 483 NIFFNTLLNHLCKEGMVARAKNIFDLMVRVD-VQRDVITYNTLIDGYCLHGKVDEAAKLL 541
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ M GV P Y+T+IN C +++DA F++M G+ P +S + Q L
Sbjct: 542 EGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGL 598
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 151/307 (49%), Gaps = 2/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCK-SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G ++ +N +I+ L + R ++ A +FD+M + PD+ +Y ++ + + +
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDK 256
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V M +G P+ +++ +++ +CS+ + ++A+ +F+ M +P + TL+
Sbjct: 257 AAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMG 316
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L R EA + F KRG +P + TY ++ Y + + ++D M + GI P
Sbjct: 317 YLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQP 376
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ ++I++ K G+ ++A +F +M R+ G P TY IV+ C +VD AM
Sbjct: 377 DHYIFNILIGTYTKHGKVDDAMLLFSKM-RRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ 435
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ + + G+ P ++ LI+ LC DK D A + EM+ GI P F+ L L
Sbjct: 436 FGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCK 495
Query: 304 EGMEETA 310
EGM A
Sbjct: 496 EGMVARA 502
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 146/323 (45%), Gaps = 8/323 (2%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL-SMNEV 67
L ++ +ID + H++ A ++ + + + +++ LL+ +K +M+
Sbjct: 90 NLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIA 149
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-----CKPSPHIFCTLI 122
R M G P+V SY I++ C R +A+ L M + P + T+I
Sbjct: 150 LRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVI 209
Query: 123 NGLGSEKR-LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
NGL E R L A F Q +G P+ TYN+++ A + ++ A ++ M K G
Sbjct: 210 NGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGA 269
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN T++ +LH +G+ +A VFKRM R G EP V TY ++ C N + A
Sbjct: 270 MPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRD-GVEPDVFTYNTLMGYLCKNGRSMEAR 328
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+I+D M RG P Y TL++ E L M+ GI+P +F+ L
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY 388
Query: 302 RDEGMEETAVVLAQKIDKLRKTP 324
G + A++L K+ + P
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNP 411
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 130/270 (48%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L++ LCK V RA+ +FD M + D+ +Y L++G+ + ++ M
Sbjct: 486 FNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMV 545
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG +P+ V+Y MIN +C R ++A LFR+M + P + T++ GL +R +
Sbjct: 546 LDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTA 605
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + K G + + TYN ++ C + +DA R+ + RT++I++
Sbjct: 606 AAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMI 665
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +EA +F + + G P V TY ++++ ++ ++ ++ G
Sbjct: 666 DALLKGGRHDEAKDLFASLLAR-GLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGC 724
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
M + L+ L + ++ A Y ++
Sbjct: 725 TANSRMLNALVGKLLQKGEVRKAGVYLSKI 754
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 148/340 (43%), Gaps = 36/340 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + FN LI T K V+ A +F KM+++ +PD +Y I+++
Sbjct: 369 MVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGK 428
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +G PD V + +I+ C+ ++D+A EL EM P+ F T
Sbjct: 429 VDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNT 488
Query: 121 LINGLGSEKRLSEALQFF-------------------------GQSKKR----------G 145
L+N L E ++ A F G+ + G
Sbjct: 489 LLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDG 548
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P TYN ++ YC + RI DA+ + +M G+ P TY +L L +A RT A
Sbjct: 549 VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAK 608
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ M K G + + TY I++ C N D A+RI+ + ++ +I++
Sbjct: 609 ELYLWMI-KSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDA 667
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
L + D+A F +L G+ P + + ++L ++G
Sbjct: 668 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 35/189 (18%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K +N +I+ CK+ +E A +F +M + +P I +Y+ +L+G Q + +
Sbjct: 548 GVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAA 607
Query: 65 NEVYREMKDDGFEPDVVSYGI-----------------------------------MINA 89
E+Y M G + D+ +Y I MI+A
Sbjct: 608 KELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDA 667
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
R+DEA +LF + A P+ + ++ L + L E F +K G
Sbjct: 668 LLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTAN 727
Query: 150 APTYNAVVG 158
+ NA+VG
Sbjct: 728 SRMLNALVG 736
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 42/190 (22%)
Query: 170 YRMMDEMRKCGIGPNTRTYDIV----------------LHHLIKAGRTEEAYSVF----- 208
+R M + + + PN TY +V L +I++G T EA +
Sbjct: 76 FRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKA 135
Query: 209 ----KRMS--------RKP--GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR---- 250
KR S R P G P V +Y I+++ C + A+ + M
Sbjct: 136 LCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTR 195
Query: 251 -GVLPVMHMYSTLINSLCHEDK-LDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGME 307
G P + Y+T+IN L E + LD A F +MLD G+ P ++++ AL + M+
Sbjct: 196 GGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMD 255
Query: 308 ETAVVLAQKI 317
+ AVVL + +
Sbjct: 256 KAAVVLVRMV 265
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/157 (19%), Positives = 72/157 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+K ++ +N ++ LC++ + A +F + F + +++ I+++ +
Sbjct: 614 MIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGR 673
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ + G P+VV+Y +M+ + +E +LF +E C + +
Sbjct: 674 HDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNA 733
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
L+ L + + +A + + + F EA T ++V
Sbjct: 734 LVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 141/283 (49%), Gaps = 4/283 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N LI C+ ++ +A +FD+++ P I +Y LL+G +Q L +
Sbjct: 371 LPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM ++G PD+V+Y I++N C A E F EM + + + T I G
Sbjct: 431 LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
S A + +GF P+ YN VV C + +A ++ +M G+ P+
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++H ++ GR + +F M K G P+V TY +++ +++ A + E
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSK-GLTPSVVTYTVLIHGHAGKGRLERAFIYFSE 609
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M+ +G+LP + Y++LIN LC ++D A +F EM++ GI P
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFP 652
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 139/275 (50%), Gaps = 3/275 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN-EVYREMKDD 74
LI K VE+ VFDKM K R PD+K+ +L + K+L+S EVYR M +
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRIL-RDKDLMSKAVEVYRTMGEF 228
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G +P +V+Y +++++C + + ++L EM+ C P+ + LINGL + +A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
G+ K G + A TYN ++ Y + +A + +EM G P TY+ ++
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K GR +A M P V +Y ++ +C + A ++DE+++ + P
Sbjct: 349 LCKLGRMSDAMQQLSDMLAN-NLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+TL++ LC + +L+ A + EM++ GI P
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D LC+ +E AQ++ +M PDI +YTIL+ G + +L E + EM
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G E D +Y I A L EM A P I+ +++GL L
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + G P+ TY +++ A+ + R+ + EM G+ P+ TY +++
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H GR E A+ F M K G P V TY ++ C ++D A + EM +G+
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEK-GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + Y+ LIN C+ +A +++MLD G++P S L + L
Sbjct: 651 FPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 7/320 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG+K + +N L+D+ CK V++ ++ +M++R P+ +Y +L+ G ++
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM G + +Y +I + + EA+ L EM P+ + +
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I GL R+S+A+Q P+ +YN ++ YC + A+ + DE+R
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ +L L + G E A + M + G P + TY I+V C + MA
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMA 463
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF---QEMLDIGIRPPGQLFSNL 297
+DEM G+ + Y+T I E KL D + F +EML G P +++ +
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRI---VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVV 520
Query: 298 KQALRDEGMEETAVVLAQKI 317
L G E A L QK+
Sbjct: 521 VDGLCKLGNLEEASELLQKM 540
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 140/287 (48%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K L ++ + NR++ L + +A EV+ M + P I +Y LL+ + +
Sbjct: 190 MIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGK 249
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ G P+ V+Y ++IN +++A L EM T K S + +
Sbjct: 250 VQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G ++ L+EAL + +G P TYN+ + C R++DA + + +M
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y+ +++ + G +A+ +F + R PT+ TY ++ C ++++A
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL-RSIYLFPTIVTYNTLLDGLCRQGELEVA 428
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
++ EM G+ P + Y+ L+N C L A ++F EML G+
Sbjct: 429 QQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G +L +N ++D LCK ++E A E+ KM PD +YT ++ + L
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ EM G P VV+Y ++I+ H R + A F EM+ P+ + +LING
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +R+ +A FF + ++G P +Y ++ C +A + +M G+ P+
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688
Query: 185 TRTYDIVLHHLIK 197
+ T+ +L L K
Sbjct: 689 SCTHSALLKQLGK 701
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 98/205 (47%), Gaps = 1/205 (0%)
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
++I + ++ + +F +M + P ++ L + +S+A++ + +
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P TYN ++ +YC ++ ++ EM++ G PN TY+++++ L K G E+A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+ M K G + + TY ++ + + A+ + +EM +G P + Y++ I
Sbjct: 289 KGLIGEM-LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRP 289
LC ++ DA + +ML + P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLP 372
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
E + ++ Y + + D+M K + P+ + + +L L +A
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
V++ M + G +PT+ TY ++ +C +V + + EM+ RG P Y+ LIN L
Sbjct: 221 VYRTMG-EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+ + + A EML G++ ++ L ++GM A+ L +++ +P V
Sbjct: 280 SKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTV 339
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI +ERA F +M+++ P++ +Y L+ G + + +
Sbjct: 579 GLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQA 638
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM + G P+ SY I+IN +C+ + EA+ L+++M +P L+
Sbjct: 639 YNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQ 698
Query: 125 LGSEKRLSEALQF 137
LG + +L Q
Sbjct: 699 LGKDCKLQAVRQL 711
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N LI+ LCK R +++A F +M ++ P+ SYTIL+ N
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGN 669
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMI 87
+Y++M D G +PD ++ ++
Sbjct: 670 WQEALSLYKQMLDRGVQPDSCTHSALL 696
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L +N +I+ LCK +V A+ + K+ + PD +YT ++ G ++ +L S
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V+ +M +G EP+ V+Y +IN C + R +EA +L REM P+ H I
Sbjct: 270 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 329
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +A + F K +G EP TY A++ C S + A + M + G+ PN
Sbjct: 330 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPN 389
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+ +++ L++ R + A+ V M R G P + TY +++ +C AM +
Sbjct: 390 TVTYNALINILVENRRIKYAFVVLNLMGRN-GCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ M RG + Y+T+I C A + M D G +P
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 9/293 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----G 56
M + G+ +N LI+ L ++R ++ A V + M + P+I +Y +++G+
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+K +L MN M G ++V+Y +I +C + A+ + M CKP
Sbjct: 441 PKKAMLVMNN----MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 496
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ LI G ++ A F + G P TY A++ YC +++ A +++ M
Sbjct: 497 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
++ G PN +TY++++H L K A + K M + G P V TY ++ C N
Sbjct: 557 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE-GIFPNVVTYTAMIDGLCKNGS 615
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+A+ ++++M +G LP + YS+LI +L E K+++A F E+ G+ P
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 668
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 1/274 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L +N +I C S + A + D M+ PD SYT L+ G+ +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S ++ EM DDG P+ V+Y +I+ +C ++ D A L M+ + C+P+ +
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + S A + + G P TY A++ C + + A M ++M + G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ L + G+ EEA ++F + R G P TY ++ + + +V+ A
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERH-GLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
M G P + Y LI L +E L D
Sbjct: 690 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N +I C ++A V + M +R ++ +Y +++G+ N
Sbjct: 416 MGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 475
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S + M+D G +PD SY +I C + + A LF EM P+ +
Sbjct: 476 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 535
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +++L A K+ G P TYN ++ + A + M + G
Sbjct: 536 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 595
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY ++ L K G T A +F +M + G P + TY ++R +V+ A
Sbjct: 596 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ-GCLPNLLTYSSLIRALGQEGKVEEA 654
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ E++ G++P Y +I + K++ A + M+ G +P + L +
Sbjct: 655 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714
Query: 301 LRDE 304
L++E
Sbjct: 715 LKNE 718
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 139/316 (43%), Gaps = 42/316 (13%)
Query: 4 FGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
FGL E+ D + LID CK ++ A + + MK+ P++++Y +L+ G
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+Q N E+ + M ++G P+VV+Y MI+ C A+E+F +M C P+
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +LI LG E ++ EA F + ++ G P+ TY ++ AY S ++ A+ +
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS------TYEIVV 228
M K G P TY + LIK G E +R++ P P S + V
Sbjct: 695 RMIKAGCQPTLWTYGV----LIK-GLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 749
Query: 229 RMFCYNAQVDMAMRI---------------WDE-------MKARGVLPVMHMYSTLINSL 266
M A++D + + W E M ++G+ P Y++L+ SL
Sbjct: 750 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809
Query: 267 CHEDKLDDACKYFQEM 282
+D A F+ M
Sbjct: 810 LRVRNVDLAMGVFKHM 825
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 135/345 (39%), Gaps = 40/345 (11%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGF 76
I LC E A +F MK + +P++ +YT L+ G L ++ M DG
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGV 386
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING---LGSEKRLSE 133
P+ V+Y +IN +R A + M C P+ + +I G LG K+
Sbjct: 387 FPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK--- 443
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+ +RG TYN ++ YC S A R++D MR G P+ +Y ++
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503
Query: 194 HLIKAGRTEEAYSVFKRMS----------------------------------RKPGTEP 219
K + E A+ +F M ++ G P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY +++ A + M G+ P + Y+ +I+ LC A + F
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+M++ G P +S+L +AL EG E A L ++++ P
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 668
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 2/270 (0%)
Query: 21 CKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPD 79
C S+ + R D + + + +Y+ LL + ++ + Y M +G +P+
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
++ Y +INA C +A + +++ + P + ++I G + L ALQ F
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
Q K G EP TY+ ++ C S R+N+A+ ++ EM GI P T + L G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
E+A+ +F M K G EP V TY ++ C + + +A+ ++ M GV P Y
Sbjct: 335 CYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTY 393
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ LIN L ++ A M G P
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSP 423
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P YNAV+ A C + DA +M ++ + + P+T TY ++ + + A
Sbjct: 210 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 269
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
VF +M+ K G EP TY ++ C + +V+ A + EM G+LP H + I
Sbjct: 270 LQVFNQMA-KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+LC +DA + F +M + G P ++ L L G+ + A+ L ++ +
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSR 383
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV---GAYCWSMRINDAY-RMMDEM 176
LI S++ ++ + F + G Y+A++ + + D Y RM+ E
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE- 209
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ PN Y+ V++ L K G +A ++ K++ P TY ++ C
Sbjct: 210 ---GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESE-MSPDTFTYTSMILGHCRKHD 265
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+D A++++++M G P YSTLIN LC ++++A +EM+ GI P +
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325
Query: 297 LKQALRDEGMEETA 310
AL D G E A
Sbjct: 326 PIIALCDMGCYEDA 339
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I + A E+++ M + PD +Y+IL+ G + + S + REM+
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREME 373
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF P+VV+Y I++++ C +D+ L EM A + + +I L + R+
Sbjct: 374 KKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 433
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ + + +G P+ +YN ++ C + ++ +A M + + + G+ N TY+ ++
Sbjct: 434 EAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTII 493
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L++ GR ++A + K M G V +Y +++ C + VD ++ + +EM +G+
Sbjct: 494 HALLRDGRWQDAVRLAKEMILH-GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P Y+ LI+ LC E ++ DA + ++ML+ G+ P ++ L L G A+
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 612
Query: 313 LAQKI 317
L +K+
Sbjct: 613 LLEKL 617
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 157/314 (50%), Gaps = 5/314 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G ++ F+ ++ +C V A + D+M + P + +Y LL+G + +
Sbjct: 239 MGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQ--- 295
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ R M E +VV + +I + + EA EL+ M C+P H + L++
Sbjct: 296 -ADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMH 354
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL R+S A++ + +K+GF P TY V+ ++C + +D +++EM G+
Sbjct: 355 GLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL 414
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N++ Y+ +++ L K GR +EA + + M R G P + +Y ++ C N Q++ A +
Sbjct: 415 NSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++ + GV+ Y+T+I++L + + DA + +EM+ G ++ L +A+
Sbjct: 474 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 533
Query: 304 EGMEETAVVLAQKI 317
+G + ++VL +++
Sbjct: 534 DGNVDRSLVLLEEM 547
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 4/291 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
+ GLK PD ++ L+ LCK + A + +M+K+ F P++ +YTI+L + +
Sbjct: 335 ETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKN 394
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ EM G + Y MI A C R DEA+ L +EM + C P +
Sbjct: 395 GMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSY 454
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
T+I L + +++ EA F + G TYN ++ A R DA R+ EM
Sbjct: 455 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 514
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G + +Y+ ++ + K G + + + + M+ K G +P +Y I++ C +V
Sbjct: 515 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK-GIKPNNVSYNILISELCKERRVR 573
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A+ + +M +G+ P + Y+TLIN LC + A +++ + + P
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHP 624
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 34/323 (10%)
Query: 28 RAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREM-KDDGFEPDVVSYGI 85
RA + D++ +R P +SY ++L + +YR M D P ++G+
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
A C R +EA+ L R M C P ++ T+I+ L + ++EA + G
Sbjct: 181 AARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA------- 198
+ T++ VV C R+ +A R++D M G P TY +L L +
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300
Query: 199 ------------------------GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
G+ EA +++ M K G +P TY I++ C
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK-GCQPDAHTYSILMHGLCKL 359
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
++ A+R+ EM+ +G P + Y+ +++S C DD +EM G+ Q +
Sbjct: 360 GRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419
Query: 295 SNLKQALRDEGMEETAVVLAQKI 317
+ + AL +G + A+ L Q++
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEM 442
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL +N +I LCK ++ A + +M+ + +PDI SY ++ +
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + ++G + ++Y +I+A R+ +AV L +EM C +
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 526
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + + + +L + ++G +P +YN ++ C R+ DA + +M G
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ +++ L K G A ++ +++ + P + TY I++ C +D A
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE-NVHPDIITYNILISWHCKVRLLDDA 645
Query: 241 MRIWDEMKARGVLPV 255
+ + A V PV
Sbjct: 646 AMLLNRAMA-AVCPV 659
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 160/305 (52%), Gaps = 2/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL+ FN +ID C+ + +++A+E KM + P +++Y IL++G+G+
Sbjct: 303 MESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCV 362
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ EM+++G +P+V+SYG +IN C + EA + R+M P+ +I+
Sbjct: 363 FSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + +L EAL+FF + K G TYN+++ C ++ +A M + G
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ AG +++ +++ M +K G +PT++T+ ++ C + +
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETM-KKLGLKPTINTFHPLIS-GCSKEGIKLK 540
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++EM + P +Y+ +I+ + A +EM+D+G+RP + +++L
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILG 600
Query: 301 LRDEG 305
EG
Sbjct: 601 HLKEG 605
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 147/302 (48%), Gaps = 2/302 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K ++ + FN L+ LCK+R +E A+ + +++K F PD +Y+I+ +G + +
Sbjct: 162 MKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDD 221
Query: 61 LLSMN-EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
++YRE G + D + I++N C + ++A E+ + + P I+
Sbjct: 222 GAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYN 281
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T++NG + A+ Q + RG P +N+V+ +C I+ A + +M
Sbjct: 282 TIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGK 341
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GI P+ TY+I++ + + + + M G +P V +Y ++ C + ++
Sbjct: 342 GIAPSVETYNILIDGYGRLCVFSRCFQILEEMEEN-GEKPNVISYGSLINCLCKDGKILE 400
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + +M RGVLP ++Y+ LI+ C KL +A ++F EM GI +++L +
Sbjct: 401 AEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIK 460
Query: 300 AL 301
L
Sbjct: 461 GL 462
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 147/300 (49%), Gaps = 6/300 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + + R + K ++ A E+F+ MK+R+ P++ Y +L+ G ++K
Sbjct: 57 MVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKR 116
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM P+ V++ +I+ +C A D A+ L M+ +PS F +
Sbjct: 117 IRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNS 176
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC- 179
L++GL +R+ EA + K GF P+ TY+ + S + A +D R+
Sbjct: 177 LLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKS--DDGAGAALDLYREAI 234
Query: 180 --GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G+ + T I+L+ L K G+ E+A V K + G P Y +V +C +
Sbjct: 235 GKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEH-GLVPGEVIYNTIVNGYCQIGDM 293
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D A+ ++M++RG+ P ++++I+ C +D A ++ ++M+ GI P + ++ L
Sbjct: 294 DRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNIL 353
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 147/312 (47%), Gaps = 2/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ C+ ++RA ++M+ R P+ ++ +++ + + + + E ++M
Sbjct: 280 YNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMV 339
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P V +Y I+I+ + + ++ EME KP+ + +LIN L + ++
Sbjct: 340 GKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKIL 399
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA RG P A YN ++ C ++ +A R DEM K GIG TY+ ++
Sbjct: 400 EAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLI 459
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K G+ +EA +F ++ G P V TY ++ + + +++ MK G+
Sbjct: 460 KGLCKMGKLKEAEEMFFLIT-STGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGL 518
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P ++ + LI+ C ++ + F EML + + P +++ + ++ G + A
Sbjct: 519 KPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFS 577
Query: 313 LAQKIDKLRKTP 324
L +++ + P
Sbjct: 578 LQKEMVDMGVRP 589
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 151/332 (45%), Gaps = 18/332 (5%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ +S+ + E++D M++ P +++E + K ++ ++++EM G
Sbjct: 2 LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F PD + YG + A A+ELF M+ P+ ++ LI GL EKR+ +A
Sbjct: 62 FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAE 121
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ FG+ R P T+N ++ YC + ++ A + + M+K + P+ T++ +L L
Sbjct: 122 KLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGL 181
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV-RMFCYNAQVDMAMRIWDEMKARGVLP 254
KA R EEA + + + G P TY I+ + + A+ ++ E +GV
Sbjct: 182 CKARRIEEARCMLNEI-KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-------------- 300
+ S L+N LC E K++ A + + +++ G+ P +++ +
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300
Query: 301 --LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
+ G+ + IDK + ++D+ +
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAE 332
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 133/292 (45%), Gaps = 1/292 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK VE+A+EV + + P Y ++ G+ Q ++ +M+ G
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P+ +++ +I+ C + D+A E ++M PS + LI+G G S
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q + ++ G +P +Y +++ C +I +A ++ +M G+ PN Y++++
Sbjct: 368 QILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGS 427
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
G+ EA F MS K G T+ TY +++ C ++ A ++ + + G P
Sbjct: 428 CTVGKLREALRFFDEMS-KNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPD 486
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+ Y++LI+ + + ++ M +G++P F L EG++
Sbjct: 487 VITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIK 538
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 50 ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
+LL + K ++E+Y M+ +G P +++ + +K++D ++LF+EM
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+P ++ + L A++ F K+R P YN ++G C RI DA
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
++ EM + PN T++ ++ KAG + A + +RM +K EP++ T+ ++
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERM-KKEKVEPSIITFNSLLS 179
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC-HEDKLDDACKYFQEMLDIGIR 288
C +++ A + +E+K G +P YS + + L +D A ++E + G++
Sbjct: 180 GLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVK 239
Query: 289 PPGQLFSNLKQALRDEGMEETA 310
S L L EG E A
Sbjct: 240 IDNYTCSILLNGLCKEGKVEKA 261
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 97/245 (39%), Gaps = 34/245 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + +N LI LCK ++ A+E+F + PD+ +Y L+ G+ N
Sbjct: 443 MSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGN 502
Query: 61 LLSMNEVYREMKDDGFEP----------------------------------DVVSYGIM 86
E+Y MK G +P D V Y M
Sbjct: 503 SQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAM 562
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
I+ + +A L +EM +P + +LI G E +LSE K +G
Sbjct: 563 IHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGL 622
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
PEA TY+ ++ +C N AY EM + G PN + + L K GR +EA S
Sbjct: 623 IPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQS 682
Query: 207 VFKRM 211
+ M
Sbjct: 683 ICSEM 687
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 146/312 (46%), Gaps = 11/312 (3%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK----------RRFDPDIKSYTILLE 53
FG + ++ +N ++ LC ++ +E+ D+M K PDI+ Y +++
Sbjct: 215 FGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIID 274
Query: 54 GWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
G ++ + NE+ M G +P+VV Y ++ CSA R+++A EL EM NC
Sbjct: 275 GICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPL 334
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
F L++ + ++ Q + G P+ TY V+ +C I++A ++
Sbjct: 335 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 394
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
M CG PNT +Y IVL L R +A + RM ++ G P T+ ++ C
Sbjct: 395 KNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQ-GCLPNPVTFNTIINFLCK 453
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
V+ A+ + +M G P + YST+I+ L K ++A + M++ GI P
Sbjct: 454 KGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVIT 513
Query: 294 FSNLKQALRDEG 305
+S++ AL EG
Sbjct: 514 YSSMAFALAREG 525
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 151/306 (49%), Gaps = 1/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N ++ +C + E+A+E+ +M ++ D ++ IL++ + Q
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M + G PDV++Y +IN C DEAV L + M + CKP+ +
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL S +R +A + + ++G P T+N ++ C + A ++ +M G
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG 471
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+TEEA + M K G P V TY + ++D
Sbjct: 472 CNPDLISYSTVIDGLGKAGKTEEALELLNVMINK-GITPNVITYSSMAFALAREGRIDKV 530
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D ++ + +Y+ +I+SLC + D A + M+ G P ++ L +
Sbjct: 531 IQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKG 590
Query: 301 LRDEGM 306
L EG+
Sbjct: 591 LASEGL 596
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 148/325 (45%), Gaps = 11/325 (3%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQKNLLS-- 63
+ N +I+ +C V+ E+ K+ + DI SY +L+G WG + L+
Sbjct: 188 NCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEM 247
Query: 64 --MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
++E +M G PD+ Y +I+ C ++ A E+ M + KP+ + T+
Sbjct: 248 VKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTV 307
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+ G+ S R +A + + ++ + T+N +V +C + ++ ++++M + G
Sbjct: 308 LKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGC 367
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY V++ K G +EA + K M G +P +Y IV++ C + A
Sbjct: 368 MPDVITYTTVINGFCKEGLIDEAVMLLKNMP-SCGCKPNTISYTIVLKGLCSTERWVDAE 426
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ M +G LP ++T+IN LC + ++ A + ++ML G P +S + L
Sbjct: 427 ELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGL 486
Query: 302 RDEGMEETAVVLAQKIDKLRKTPLV 326
G E A+ L + TP V
Sbjct: 487 GKAGKTEEALELLNVMINKGITPNV 511
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 118/284 (41%), Gaps = 11/284 (3%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++ LC + A V D+M R P Y +++E + S V + G
Sbjct: 122 VVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKG 181
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
D + ++INA C DE +E+ R++ C+ + ++ GL + KR +
Sbjct: 182 STLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVE 241
Query: 136 QF----------FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ Q + G P+ Y ++ C A ++ M G+ PN
Sbjct: 242 ELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNV 301
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
Y+ VL + A R E+A + M +K V T+ I+V FC N VD + + +
Sbjct: 302 VCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDV-TFNILVDFFCQNGLVDRVIELLE 360
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M G +P + Y+T+IN C E +D+A + M G +P
Sbjct: 361 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKP 404
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 92/214 (42%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K + ++ LC + A+E+ +M ++ P+ ++ ++ ++
Sbjct: 397 MPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGL 456
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ ++M +G PD++SY +I+ A + +EA+EL M P+ + +
Sbjct: 457 VEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSS 516
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ L E R+ + +Q F + +A YNAV+ + C + A + M G
Sbjct: 517 MAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNG 576
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
PN TY ++ L G EA + + +
Sbjct: 577 CMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 13/172 (7%)
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
+A++ + C + R DA R +D G Y+ ++ + G+ E A +R++
Sbjct: 56 SALIRSLCVAGRTADAVRALDAA---GNAAGVVDYNAMVAGYCRVGQVEAA----RRLAA 108
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
P TY VVR C ++ A+ + DEM +R +P+ MY +I S C
Sbjct: 109 AVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 325
A + + + G + + A+ D+G + + ++ LRK PL
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVD------EGLEMLRKLPL 214
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 7/163 (4%)
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI L R ++A++ + G YNA+V YC ++ A R+ +
Sbjct: 57 ALIRSLCVAGRTADAVRALDAA---GNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP-- 111
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ PN TY V+ L GR +A +V M+ + P Y +++ C +
Sbjct: 112 -VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSR-SCVPIPPMYHVIIESACRSGGYSS 169
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
A+R+ + + A+G + +IN++C + +D+ + +++
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKL 212
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 11/173 (6%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P A TY VV C RI DA ++DEM P Y +++ ++G A V
Sbjct: 114 PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRV 173
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+ + K T T +V+ C VD + + ++ G + Y+ ++ LC
Sbjct: 174 LEALHAKGSTLDT-GNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLC 232
Query: 268 HEDKLDDACKYFQEMLDI----------GIRPPGQLFSNLKQALRDEGMEETA 310
+ D + EM+ + G P ++++ + + EG E A
Sbjct: 233 AAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVA 285
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 153/342 (44%), Gaps = 36/342 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ K V +A E+ MK ++K+Y++L+ G+ + K+ +
Sbjct: 454 GFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANA 513
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ + DG +PDVV Y +I A C D A+ + R+M+ +P+ F +I+G
Sbjct: 514 FSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHG 573
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ AL+ F ++ G P TYNA++ ++ A ++DEM G+GPN
Sbjct: 574 FARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPN 633
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR--------------- 229
TY ++ G TE+A+ F + R G E V TYE +++
Sbjct: 634 EHTYTTLMQGYASLGDTEKAFQYFTVL-RNEGLEIDVYTYEALLKSCCKSGRMQSALAVT 692
Query: 230 -----------MFCYNAQVDMAMR---IWD------EMKARGVLPVMHMYSTLINSLCHE 269
F YN +D R +W+ +M+ G+LP +H Y++ IN+ C
Sbjct: 693 KEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKA 752
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ A + QEM GI+P + ++ L M E A+
Sbjct: 753 GDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKAL 794
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 6/316 (1%)
Query: 7 KQELPDFNR-----LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
K++LP N +I C+ +++RA+ + +M+++ D I Y +++G+ N
Sbjct: 381 KEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNE 440
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
V+ +K+ GF P V+SYG +IN + + +A+E+ + M+ + K + + L
Sbjct: 441 EKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSML 500
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
ING K + A F K G +P+ YN ++ A+C ++ A M+ +M+K
Sbjct: 501 INGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERH 560
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P TRT+ ++H +AG A +F M R+ G PTV TY ++ Q+ A+
Sbjct: 561 RPTTRTFLPIIHGFARAGEMRRALEIFDMM-RRSGCIPTVHTYNALILGLVEKRQMTKAV 619
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I DEM GV P H Y+TL+ + A +YF + + G+ + L ++
Sbjct: 620 AILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSC 679
Query: 302 RDEGMEETAVVLAQKI 317
G ++A+ + +++
Sbjct: 680 CKSGRMQSALAVTKEM 695
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 140/299 (46%), Gaps = 1/299 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GLK ++ +N +I C +++RA + +M+K R P +++ ++ G+ + +
Sbjct: 522 KDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMR 581
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E++ M+ G P V +Y +I ++ +AV + EM P+ H + TL+
Sbjct: 582 RALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLM 641
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
G S +A Q+F + G E + TY A++ + C S R+ A + EM I
Sbjct: 642 QGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIP 701
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
NT Y+I++ + G EA + ++M RK G P + TY + C + A
Sbjct: 702 RNTFVYNILIDGWARRGDVWEAADLMQQM-RKEGLLPDIHTYTSFINACCKAGDMQKATE 760
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I EM+A G+ P + Y+TLIN + A F+EM G +P ++ L +L
Sbjct: 761 IIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSL 819
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 143/336 (42%), Gaps = 42/336 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI R +E A KMK+ + I +Y+I++ G+ + N + + + E K
Sbjct: 322 YSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAK 381
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING---LGSEK 129
+ + V YG +I AHC D A L REME I+ T+++G +G+E+
Sbjct: 382 EKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEE 441
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ L F + K+ GF P +Y ++ Y +++ A + M+ GI N +TY
Sbjct: 442 K---CLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYS 498
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD----------- 238
++++ +K A+SVF+ + K G +P V Y ++ FC +D
Sbjct: 499 MLINGFLKLKDWANAFSVFEDFT-KDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQK 557
Query: 239 ------------------------MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
A+ I+D M+ G +P +H Y+ LI L + ++
Sbjct: 558 ERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTK 617
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
A EM G+ P ++ L Q G E A
Sbjct: 618 AVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKA 653
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 1/228 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LI L + R + +A + D+M P+ +YT L++G+ +
Sbjct: 590 MRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGD 649
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++++G E DV +Y ++ + C + R A+ + +EM A N + ++
Sbjct: 650 TEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNI 709
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + EA Q +K G P+ TY + + A C + + A ++ EM G
Sbjct: 710 LIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASG 769
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
I PN +TY +++ +A E+A S F+ M + G +P + Y +V
Sbjct: 770 IKPNLKTYTTLINGWARASMPEKALSCFEEM-KLAGFKPDKAVYHCLV 816
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 144/312 (46%), Gaps = 7/312 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F ++++T + + + F+++KK P K Y ++++ +G++ ++ + + M+
Sbjct: 258 FQKILET--QPENWQAVVTAFERIKK----PARKEYGLMVKYYGRRGDMHHARQTFESMR 311
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP Y +I+A+ + +EA+ R+M+ + + + ++ G
Sbjct: 312 ARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNAD 371
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A +F ++K++ A Y ++ A+C ++ A ++ EM + GI Y ++
Sbjct: 372 AADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMM 431
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
G E+ VF R+ ++ G P+V +Y ++ ++ +V A+ I MK G+
Sbjct: 432 DGYTMIGNEEKCLIVFDRL-KECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGI 490
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
M YS LIN +A F++ G++P L++N+ A G + A+
Sbjct: 491 KHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAIC 550
Query: 313 LAQKIDKLRKTP 324
+ +++ K R P
Sbjct: 551 MVRQMQKERHRP 562
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 62/127 (48%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID + V A ++ +M+K PDI +YT + + ++ E+ +EM+
Sbjct: 707 YNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEME 766
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P++ +Y +IN A ++A+ F EM+ KP ++ L+ L S +
Sbjct: 767 ASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFA 826
Query: 133 EALQFFG 139
++ + G
Sbjct: 827 QSYVYSG 833
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL ++ + I+ CK+ +++A E+ +M+ P++K+YT L+ GW +
Sbjct: 730 MRKEGLLPDIHTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASM 789
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
+ EMK GF+PD Y ++ + S + ++
Sbjct: 790 PEKALSCFEEMKLAGFKPDKAVYHCLVTSLLSRATFAQS 828
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + F LI + V+ A + D+MK F+ D+ Y + ++ +G+
Sbjct: 228 MQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGK 287
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + E+K G PD V++ MI C A+R DEAVELF E+++ P + + T
Sbjct: 288 VDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNT 347
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G GS + +EA + K++G P YN ++ ++ +A R+++ M K
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMD 406
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +Y+I++ L KAG E A V M ++ G P + T I++ C ++D A
Sbjct: 407 AAPNLTSYNILIDMLCKAGELEAALKVQDSM-KEAGLFPNIITVNIMIDRLCKAQRLDEA 465
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I+ + + P + +LI+ L K++DA +++MLD G P ++++L
Sbjct: 466 CSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSL 522
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 165/347 (47%), Gaps = 37/347 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ L + VE A + + MK P++ SY IL++ + L + +V MK
Sbjct: 380 YNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALKVQDSMK 438
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P++++ IMI+ C A+R DEA +F ++ C P FC+LI+GLG +++
Sbjct: 439 EAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVN 498
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKC----------- 179
+A + + G P A Y +++ + R D +++ EM R C
Sbjct: 499 DAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYM 558
Query: 180 ----------------------GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
G+ P+ R+Y I++H L+K G +++ Y +F M ++ G
Sbjct: 559 DCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM-KEQGL 617
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
Y IV+ FC + +V+ A ++ +EMK +G+ P + Y ++I+ L D+LD+A
Sbjct: 618 HLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYM 677
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+E + ++S+L G + A ++ +++ + TP
Sbjct: 678 LFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 724
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 151/324 (46%), Gaps = 2/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KF + + LI L + + + +M++ ++ + +T L+ + ++
Sbjct: 193 MRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGR 252
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK + F D+V Y + I+ + D A + F E+++ P F +
Sbjct: 253 VDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTS 312
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L +R+ EA++ F + P YN ++ Y + N+AY +++ ++ G
Sbjct: 313 MIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKG 372
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ Y+ +L L + G+ EEA + + M K P +++Y I++ M C +++ A
Sbjct: 373 CIPSVIAYNCILTCLGRKGKVEEALRILEAM--KMDAAPNLTSYNILIDMLCKAGELEAA 430
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ D MK G+ P + + +I+ LC +LD+AC F + P F +L
Sbjct: 431 LKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDG 490
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G A +L +K+ +TP
Sbjct: 491 LGRHGKVNDAYMLYEKMLDSGQTP 514
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 157/324 (48%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + N +ID LCK++ ++ A +F + + PD ++ L++G G+
Sbjct: 437 MKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGK 496
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +Y +M D G P+ V Y +I R ++ ++++EM C P +
Sbjct: 497 VNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNN 556
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + + + F + K +G P+ +Y+ ++ D Y++ EM++ G
Sbjct: 557 YMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG 616
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ +TR Y+IV+ K+G+ +AY + + M K G +PTV TY V+ ++D A
Sbjct: 617 LHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTK-GLQPTVVTYGSVIDGLAKIDRLDEA 675
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++E K++ V + +YS+LI+ ++D+A +E++ G+ P ++ L A
Sbjct: 676 YMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDA 735
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L + A+V Q + L+ P
Sbjct: 736 LVKAEEIDEALVCFQNMKNLKCPP 759
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 152/324 (46%), Gaps = 1/324 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ ++ LI L K + ++F +MK++ D ++Y I+++G+ + +
Sbjct: 581 GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKA 640
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMK G +P VV+YG +I+ R DEA LF E ++ + ++ +LI+G
Sbjct: 641 YQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDG 700
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
G R+ EA + ++G P T+N ++ A + I++A M+ PN
Sbjct: 701 FGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPN 760
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+++ L K + +A+ ++ M +K G +P TY ++ V A ++
Sbjct: 761 EVTYSIMVNGLCKVRKFNKAFVFWQEM-QKQGLKPNTITYTTMISGLARVGNVLEAKDLF 819
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ K+ G +P Y+ +I L + +K DA F+E G R + L AL
Sbjct: 820 ERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKA 879
Query: 305 GMEETAVVLAQKIDKLRKTPLVDR 328
E A ++ + ++ K+ R
Sbjct: 880 DCLEQAAIVGAVLREMAKSQHATR 903
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 1/275 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + +N +ID CKS V +A ++ ++MK + P + +Y +++G +
Sbjct: 612 MKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDR 671
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ E K + +VV Y +I+ R DEA + E+ P+ + +
Sbjct: 672 LDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNC 731
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L + + EAL F K P TY+ +V C + N A+ EM+K G
Sbjct: 732 LLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQG 791
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PNT TY ++ L + G EA +F+R + G P + Y ++ + A
Sbjct: 792 LKPNTITYTTMISGLARVGNVLEAKDLFERF-KSSGGIPDSACYNAMIEGLSNANKAMDA 850
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+++E + +G L+++L D L+ A
Sbjct: 851 YILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 144/344 (41%), Gaps = 32/344 (9%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--------RRFDPDIK---------- 46
G+++ + D R++DT +E A FD+M + RR D++
Sbjct: 65 GMRKTVHDVCRVLDTYPWGAALEDALNTFDEMPQPELVVGVIRRL-KDVRVALHYFRWVE 123
Query: 47 ----------SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
+Y LL + +NL + ++ EM GF P + M+ + +++
Sbjct: 124 RKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKL 183
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
EA + M +P+ + TLI L + L Q ++ G+E + +
Sbjct: 184 REAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTL 243
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ + R++ A ++DEM+ + Y++ + K G+ + A+ F + + G
Sbjct: 244 ICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHEL-KSQG 302
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P T+ ++ + C +VD A+ +++E+ + +P ++ Y+T+I K ++A
Sbjct: 303 LVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAY 362
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA--VVLAQKID 318
+ G P ++ + L +G E A ++ A K+D
Sbjct: 363 SLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMD 406
>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 595
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K +P N +I+ LC+ H V M K +P I ++T ++ G + N
Sbjct: 104 MSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGN 163
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +KD G+E D + G +IN C A+ ++ME NC +
Sbjct: 164 VAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNA 223
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL + + EA F Q +G +P+ TYN ++ C R +A ++ M + G
Sbjct: 224 VVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKG 283
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ +T++++ +K G A S+F M G E V TY ++ + C Q+ A
Sbjct: 284 IMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHM-GIEHDVVTYSSIIGVHCMLNQMKDA 342
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M ++D M +G LP + Y++LI+ C ++ A + EM++ G+ P
Sbjct: 343 MEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDP 391
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 146/297 (49%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ +L +N LI LC + A + M ++ PD++++ ++ + + +
Sbjct: 248 GIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRA 307
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M G E DVV+Y +I HC + +A+E+F M C P+ + +LI+G
Sbjct: 308 KSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHG 367
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K +++A+ F G+ G +P T+N ++G +C + + A + M K G P+
Sbjct: 368 WCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPD 427
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+T I+L L K EA S+F+ + K ++ + Y I++ C + +++ A+ ++
Sbjct: 428 LQTCAIILDGLFKCHFHSEAMSLFREL-EKMNSDLDIIIYSIILNGMCSSGKLNDALELF 486
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ ++GV + Y+ +IN LC E LDDA +M + G P ++ Q L
Sbjct: 487 SYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGL 543
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 120/251 (47%), Gaps = 1/251 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ ++ +I C ++ A EVFD M ++ P+I +YT L+ GW + KN
Sbjct: 314 MGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKN 373
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM ++G +P++V++ +I C A + A ELF M P
Sbjct: 374 MNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAI 433
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL SEA+ F + +K + + Y+ ++ C S ++NDA + + G
Sbjct: 434 ILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKG 493
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + TY+I+++ L K G ++A + +M G P TY + V+ ++ +
Sbjct: 494 VKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEEN-GCPPDECTYNVFVQGLLRRYEISKS 552
Query: 241 MRIWDEMKARG 251
+ MK +G
Sbjct: 553 TKYLMFMKGKG 563
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 1/233 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P V + ++ K Y A+ L + M KP+ +IN L
Sbjct: 76 PCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSV 135
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G K G EP T+ +V C + A R +D ++ G + T +++ L K
Sbjct: 136 LGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCK 195
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G + A S K+M + V+ Y VV C + V A ++ +M +G+ P +
Sbjct: 196 VGHSSAALSYLKKMEEQ-NCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLF 254
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
Y+ LI+ LC+ D+ +A M+ GI P Q F+ + GM A
Sbjct: 255 TYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRA 307
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 1/204 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N LI CK+ A+E+F M K PD+++ I+L+G +
Sbjct: 388 GLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEA 447
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++RE++ + D++ Y I++N CS+ + ++A+ELF + + K + +ING
Sbjct: 448 MSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMING 507
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E L +A + ++ G P+ TYN V I+ + + + M+ G N
Sbjct: 508 LCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRAN 567
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVF 208
T +++++ A + A+ VF
Sbjct: 568 ATTTKLLINYF-SANKENRAFQVF 590
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 141/283 (49%), Gaps = 4/283 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N LI C+ ++ +A +FD+++ P I +Y LL+G +Q L +
Sbjct: 371 LPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQ 430
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM ++G PD+V+Y I++N C A E F EM + + + T I G
Sbjct: 431 LKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
S A + +GF P+ YN VV C + +A ++ +M G+ P+
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++H ++ GR + +F M K G P+V TY +++ +++ A + E
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSK-GLTPSVVTYTVLIHGHAGKGRLERAFIYFSE 609
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M+ +G+LP + Y++LIN LC ++D A +F EM++ GI P
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFP 652
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 148/315 (46%), Gaps = 5/315 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+D LC+ +E AQ++ +M PDI +YTIL+ G + +L E + EM
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G E D +Y I A L EM A P I+ +++GL L
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + G P+ TY +++ A+ + R+ + EM G+ P+ TY +++
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H GR E A+ F M K G P V TY ++ C ++D A + EM +G+
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEK-GILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN-LKQALRD---EGMEE 308
P + Y+ LIN C+ +A +++MLD G++P S LKQ +D + +
Sbjct: 651 FPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVHG 710
Query: 309 TAVVLAQKIDKLRKT 323
T+ + K+D L +T
Sbjct: 711 TSTMPTAKVDLLSQT 725
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 139/275 (50%), Gaps = 3/275 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN-EVYREMKDD 74
LI K VE+ VFDKM K R PD+K+ +L + K+L+S EVYR M +
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRIL-RDKDLMSKAVEVYRTMGEF 228
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G +P +V+Y +++++C + + ++L EM+ C P+ + LINGL + +A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
G+ K G + A TYN ++ Y + +A + +EM G P TY+ ++
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYG 348
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K GR +A M P V +Y ++ +C + A ++DE+++ + P
Sbjct: 349 LCKLGRMSDAMQQLSDMLAN-NLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+TL++ LC + +L+ A + EM++ GI P
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 7/320 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG+K + +N L+D+ CK V++ ++ +M++R P+ +Y +L+ G ++
Sbjct: 225 MGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGE 284
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM G + +Y +I + + EA+ L EM P+ + +
Sbjct: 285 FEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNS 344
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I GL R+S+A+Q P+ +YN ++ YC + A+ + DE+R
Sbjct: 345 FIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIY 404
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ +L L + G E A + M + G P + TY I+V C + MA
Sbjct: 405 LFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINE-GIAPDIVTYTILVNGSCKMGSLSMA 463
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF---QEMLDIGIRPPGQLFSNL 297
+DEM G+ + Y+T I E KL D + F +EML G P +++ +
Sbjct: 464 QEFFDEMLHEGLELDSYAYATRI---VGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVV 520
Query: 298 KQALRDEGMEETAVVLAQKI 317
L G E A L QK+
Sbjct: 521 VDGLCKLGNLEEASELLQKM 540
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 140/287 (48%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K L ++ + NR++ L + +A EV+ M + P I +Y LL+ + +
Sbjct: 190 MIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGK 249
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ G P+ V+Y ++IN +++A L EM T K S + +
Sbjct: 250 VQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNP 309
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G ++ L+EAL + +G P TYN+ + C R++DA + + +M
Sbjct: 310 LIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN 369
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y+ +++ + G +A+ +F + R PT+ TY ++ C ++++A
Sbjct: 370 LLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL-RSIYLFPTIVTYNTLLDGLCRQGELEVA 428
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
++ EM G+ P + Y+ L+N C L A ++F EML G+
Sbjct: 429 QQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G +L +N ++D LCK ++E A E+ KM PD +YT ++ + L
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ EM G P VV+Y ++I+ H R + A F EM+ P+ + +LING
Sbjct: 569 REIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLING 628
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +R+ +A FF + ++G P +Y ++ C +A + +M G+ P+
Sbjct: 629 LCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPD 688
Query: 185 TRTYDIVLHHLIK 197
+ T+ +L L K
Sbjct: 689 SCTHSALLKQLGK 701
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 98/205 (47%), Gaps = 1/205 (0%)
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
++I + ++ + +F +M + P ++ L + +S+A++ + +
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P TYN ++ +YC ++ ++ EM++ G PN TY+++++ L K G E+A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+ M K G + + TY ++ + + A+ + +EM +G P + Y++ I
Sbjct: 289 KGLIGEM-LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRP 289
LC ++ DA + +ML + P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLP 372
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
E + ++ Y + + D+M K + P+ + + +L L +A
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
V++ M + G +PT+ TY ++ +C +V + + EM+ RG P Y+ LIN L
Sbjct: 221 VYRTMG-EFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+ + + A EML G++ ++ L ++GM A+ L +++ +P V
Sbjct: 280 SKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTV 339
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI +ERA F +M+++ P++ +Y L+ G + + +
Sbjct: 579 GLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQA 638
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM + G P+ SY I+IN +C+ + EA+ L+++M +P L+
Sbjct: 639 YNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQ 698
Query: 125 LGSEKRL 131
LG + +L
Sbjct: 699 LGKDCKL 705
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N LI+ LCK R +++A F +M ++ P+ SYTIL+ N
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGN 669
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMI 87
+Y++M D G +PD ++ ++
Sbjct: 670 WQEALSLYKQMLDRGVQPDSCTHSALL 696
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 158/322 (49%), Gaps = 1/322 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + + I LC+ +E A+++F+ MKK P++ +Y+ +++G+ + N
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +Y+E+ P+VV +G +++ C A+ A LF M P+ +++
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + EA+ + + P+ TY ++ C ++ +A R+ +M+
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P++ TY+ ++H K E+A + M+ G EP + T+ ++ +C + A
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMT-ASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M ++ EM +G++P + Y+ LI++ E + +A + + +ML+ GI P F+ L
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 301 LRDEGMEETAVVLAQKIDKLRK 322
EG A+ Q+ ++ R
Sbjct: 524 FWKEGRLSVAIDFYQENNQQRS 545
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 148/303 (48%), Gaps = 4/303 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KFG+ L +N LI CKS ++ A + +M+ PD+ +YTIL+ G +
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ N ++++MK++ P +Y +I+ +C ++A++L EM A+ +P+ F T
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + + + A+ + + +G P+ TY A++ A+ + +A R+ +M + G
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T+ ++ K GR A ++ +++ V + ++ C N + A
Sbjct: 510 IHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVG-FTCLIEGLCQNGYILRA 568
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP---PGQLFSNL 297
R + +M++ G+ P + Y +++ E ++ D +M+ GI P QL +
Sbjct: 569 SRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARF 628
Query: 298 KQA 300
QA
Sbjct: 629 YQA 631
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 1/281 (0%)
Query: 37 KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
++ + PD K+ +L G +++ S+ Y+ M G PDV Y ++ Y
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+ +L EM + KP+ +I+ I L + ++ EA + F KK G P TY+A+
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ YC + + AY + E+ + PN + ++ KA A S+F M K G
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV-KFG 334
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+P + Y ++ C + + A+ + EM++ + P + Y+ LIN LC ED++ +A
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ FQ+M + I P +++L E E A+ L ++
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 1/282 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+++ L + R + + M R PD+ Y +L + +Q ++ EM G
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+P+V Y I I C + +EA ++F M+ P+ + + +I+G + +A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + P + +V +C + + A + M K G+ PN Y+ ++H
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K+G EA + M P V TY I++ C QV A R++ +MK + P
Sbjct: 350 CKSGNMLEAVGLLSEM-ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPS 408
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
Y++LI+ C E ++ A EM G+ P FS L
Sbjct: 409 SATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 110/243 (45%), Gaps = 6/243 (2%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ ++I ++EA+ + REM+ C P +++NGL +R +
Sbjct: 135 FSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMI 191
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRI-NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
RG P+ Y V+ C+ + + +++DEM GI PN Y I + L + +
Sbjct: 192 SRGLVPDVHIY-FVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKM 250
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EEA +F+ M +K G P + TY ++ +C V A ++ E+ +LP + ++ T
Sbjct: 251 EEAEKMFELM-KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
L++ C +L A F M+ G+ P +++ L G AV L +++ L
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 322 KTP 324
+P
Sbjct: 370 LSP 372
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 4/258 (1%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V REMK PD + ++N +R+D ++ M + P HI+ L
Sbjct: 154 VSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCF 210
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ S+ + + G +P Y + C ++ +A +M + M+K G+ PN
Sbjct: 211 KQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY 270
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ K G +AY ++K + P V + +V FC ++ A ++
Sbjct: 271 TYSAMIDGYCKTGNVRQAYGLYKEILVAE-LLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M GV P +++Y+ LI+ C + +A EM + + P ++ L L E
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 307 EETAVVLAQKIDKLRKTP 324
A L QK+ R P
Sbjct: 390 VAEANRLFQKMKNERIFP 407
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 147/304 (48%), Gaps = 4/304 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM---KKRRFDPDIKSYTILLEGWGQ 57
M + G ++ +N L+ C + E A E+ M + R P++ SY ++ G+
Sbjct: 156 MPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFT 215
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + ++ EM D G +P+VV+Y +I+ C A+ D A +F++M KP
Sbjct: 216 EGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDT 275
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+G S + E ++ + G +P+ TY +++ C + R +A D M
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMI 335
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ GI PN Y I++H G E + + M G P + I+ + A +
Sbjct: 336 RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN-GLSPDHHIFNIIFTAYAKKAMI 394
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D AM I+++MK +G+ P + + LI++LC ++DDA F +M++ G+ P +F++L
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454
Query: 298 KQAL 301
L
Sbjct: 455 VYGL 458
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 158/312 (50%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I+ V++A +F +M R P++ +YT +++G + + + V+++M
Sbjct: 206 YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMI 265
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G +PD +Y +I+ + S ++ E V + EM A KP + + +L+N L + R
Sbjct: 266 DKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR 325
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA FF ++G +P Y ++ Y +++ + +++ M + G+ P+ ++I+
Sbjct: 326 EARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K +EA +F +M ++ G P V + ++ C +VD A+ +++M GV
Sbjct: 386 TAYAKKAMIDEAMHIFNKM-KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGV 444
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + ++++L+ LC DK + A +++ EML+ GIRP F+ + L +G A
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 313 LAQKIDKLRKTP 324
L ++++ P
Sbjct: 505 LIDLMERVGTRP 516
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 155/335 (46%), Gaps = 43/335 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
MD+ G++ + + +ID LCK++ V+RA+ VF +M + PD +Y L+ G+ G+
Sbjct: 230 MDR-GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K ++ M E EM G +PD +YG ++N C+ R EA F M KP+ I
Sbjct: 289 WKEVVRMLE---EMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAI 345
Query: 118 FCTLINGLGSEKRLS-----------------------------------EALQFFGQSK 142
+ LI+G ++ LS EA+ F + K
Sbjct: 346 YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMK 405
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
++G P+ + A++ A C R++DA ++M G+ PN ++ +++ L + E
Sbjct: 406 QQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWE 465
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
+A + M + G P V + ++ C QV A R+ D M+ G P + Y+TL
Sbjct: 466 KAKEFYFEMLNQ-GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTL 524
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I C ++D+A K ML +G++P ++ L
Sbjct: 525 IGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 163/394 (41%), Gaps = 71/394 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + + L++ LC + A+ FD M ++ P++ Y IL+ G+ +
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGA 358
Query: 61 LLSMNE-----------------------------------VYREMKDDGFEPDVVSYGI 85
L M++ ++ +MK G PDVV++G
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGA 418
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF------- 138
+I+A C R D+AV F +M P+ +F +L+ GL + + +A +F+
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478
Query: 139 ------------------GQSKKR----------GFEPEAPTYNAVVGAYCWSMRINDAY 170
GQ K G P+ +Y ++G +C RI++A
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAA 538
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ +D M G+ P+ TY+ +LH +AGR ++AY VF+ M R G P V TY ++
Sbjct: 539 KSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRN-GITPGVVTYSTILHG 597
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A ++ M G + +Y+ ++N L + +D+A K FQ + +
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
F+ + AL G E A+ L I P
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 145/324 (44%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ +F LID LCK V+ A F++M P+I + L+ G
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E Y EM + G PDVV + ++ C+ + +A L ME +P + T
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G R+ EA + G +P+ TYN ++ YC + RI+DAY + EM + G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY +LH L R EA ++ M G + + Y I++ N VD A
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMI-TSGKQWNIWIYNIILNGLSKNNCVDEA 642
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ + ++ + ++ +I +L + +DA F + G+ P + + +
Sbjct: 643 FKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAEN 702
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +EG E L ++K TP
Sbjct: 703 LIEEGYLEEFDDLFSAMEKSGTTP 726
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 40/267 (14%)
Query: 78 PDVVSYGIMINAH-----------------------------------CSAKRYDEAVE- 101
PD+ +Y I+I C AKR EA++
Sbjct: 92 PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF---GQSKKRGFEPEAPTYNAVVG 158
L + M C P + TL+ G +EKR EAL+ S+ R P +Y V+
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
+ +++ AY + EM GI PN TY V+ L KA + A VF++M K G +
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK-GVK 270
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P TY ++ + + +R+ +EM A G+ P + Y +L+N LC+ + +A +
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEG 305
F M+ GI+P ++ L +G
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKG 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 72/192 (37%), Gaps = 35/192 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + +N L+ C++ ++ A VF +M + P + +Y+ +L G +
Sbjct: 544 MLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRR 603
Query: 61 LLSMNEVYREMKDDG-----------------------------------FEPDVVSYGI 85
E+Y M G F+ ++ ++ I
Sbjct: 604 FSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNI 663
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
MI A + R ++A+ LF + + P +C + L E L E F +K G
Sbjct: 664 MIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSG 723
Query: 146 FEPEAPTYNAVV 157
P + NA+V
Sbjct: 724 TTPNSRMLNALV 735
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 75/172 (43%), Gaps = 6/172 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ L K+ V+ A ++F + + F +I ++ I++ + ++ +
Sbjct: 626 YNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATIS 685
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV +Y ++ +E +LF ME + P+ + L+ L ++
Sbjct: 686 SYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDIT 745
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGA------YCWSMRINDAYRMMDEMRK 178
A + + ++ F EA T ++ + + + + YR+++E +K
Sbjct: 746 RAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVLNEAKK 797
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 154/342 (45%), Gaps = 42/342 (12%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + + +++ +LCKS + A E+ ++M + P + ++ L+ G ++KNL
Sbjct: 112 GLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMA 171
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + + M G + DVV+Y +++ C A R EA +L M+A+ C P + + + G
Sbjct: 172 DSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYG 231
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC-GIGP 183
L ++ A Q Q + +P TYN ++ C S +I+ A MM++M G G
Sbjct: 232 LCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N Y V+ L K GRT+EA SV + M+R G P V TY +V C +++ A+
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMAR-AGCRPDVVTYSSLVNGLCKAGKIEEAVEA 350
Query: 244 WDEMKARGVLP-------VMH---------------------------------MYSTLI 263
EM G P ++H Y+ LI
Sbjct: 351 VREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALI 410
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC ++DDA K+FQ M G P G +S + + L G
Sbjct: 411 GGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 144/271 (53%), Gaps = 5/271 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ +N L+D LCK+ ++ A+++ ++MK PD+ +Y+ + G +
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFC 119
+L+ ++V +M+D +P+VV+Y +++ C + + D A+E+ +M +++ C + +
Sbjct: 238 VLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+++GL R EA + G P+ TY+++V C + +I +A + EM
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE----PTVSTYEIVVRMFCYNA 235
G PN TY ++H L GR EA + + MS G P+VSTY ++ C
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAG 417
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
++D A++ + M+++G P YST++ L
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 152/314 (48%), Gaps = 4/314 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR--RFDPDIKSYTILLEGWGQQ 58
M G++ + +N L++ LCK A+E+ M R R PD+ +Y+ LL G+ +
Sbjct: 36 MAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKA 95
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ E+ +E+ G PD + Y ++ + C + R EA+EL EM C P+ F
Sbjct: 96 GKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITF 155
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
TLI+G EK L A G + + TYN ++ C + R+ +A ++++ M+
Sbjct: 156 NTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA 215
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G P+ Y ++ L K+G+ A+ V ++M R +P V TY ++ C + ++D
Sbjct: 216 SGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM-RDSDHDPNVVTYNTILDGLCKSGKID 274
Query: 239 MAMRIWDEMKAR-GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A+ + ++M + G + YST+++ LC + +A + M G RP +S+L
Sbjct: 275 TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334
Query: 298 KQALRDEGMEETAV 311
L G E AV
Sbjct: 335 VNGLCKAGKIEEAV 348
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 141/293 (48%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L ++ L+ CK+ VE ++E+ ++ R PD YT ++ + L E+
Sbjct: 81 DLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELL 140
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
EM G P ++++ +I+ C K + A L + M A+ K + TL++GL
Sbjct: 141 EEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKA 200
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
RL EA Q + K G P+ Y++ V C S ++ +A++++++MR PN TY
Sbjct: 201 GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTY 260
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ +L L K+G+ + A + ++M+ G V Y VV C + A + + M
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
G P + YS+L+N LC K+++A + +EM G +P + +L L
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 102/198 (51%), Gaps = 6/198 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N ++D LCKS ++ A E+ ++M ++ Y+ +++G + V M
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G PDVV+Y ++N C A + +EAVE REM CKP+ +C+L++GL S RL
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379
Query: 132 SEALQFFGQSKKRGFE-----PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+EA + + G P TYNA++G C + RI+DA + MR G P+
Sbjct: 380 AEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439
Query: 187 TYDIVLHHLIKAGRTEEA 204
+Y ++ L ++GR +A
Sbjct: 440 SYSTIVEGLARSGRALQA 457
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 137/284 (48%), Gaps = 3/284 (1%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M + P+ ++ L+ G+ +Q + M G +P+VVSY ++ C +R
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 96 YDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
+ EA EL R+M + + +P + + TL++G ++ E+ + + RG P+A Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
V+ + C S R+ +A +++EM + G P T++ ++ + E A S+ + M+
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA- 179
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
G + V TY ++ C ++ A ++ + MKA G P + YS+ + LC K+
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+A + ++M D P ++ + L G +TA+ + +++
Sbjct: 240 NAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 155/302 (51%), Gaps = 2/302 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K ++ N LI+ L +S H+ A ++FD+MK P++ +Y +++ + K
Sbjct: 320 MLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKA 379
Query: 61 LLS-MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
LS + + MK DG P +Y I+I+ +C R ++A+ L EM+ P P +C
Sbjct: 380 PLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 439
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LIN LG KR A + F + K+ A Y ++ + R+N+A + +EM+K
Sbjct: 440 SLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKL 499
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ Y+ ++ +++A R +EA+S+F+ M G P ++++ I++
Sbjct: 500 GCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEEN-GCTPDINSHNIILNGLARTGGPKG 558
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ ++ +MK + P + ++T++ L ++A K QEM G + +S++ +
Sbjct: 559 ALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILE 618
Query: 300 AL 301
A+
Sbjct: 619 AV 620
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 154/314 (49%), Gaps = 3/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N +I L + H E+ E++++M + PD +Y+ L+ + + S ++ EM
Sbjct: 191 YNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFDEM 250
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
K++G +P Y ++ + + +EA+ L +EM A C + + LI GLG R+
Sbjct: 251 KENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRV 310
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A + K G +P+ N ++ S + DA ++ DEM+ PN TY+ +
Sbjct: 311 EDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTI 370
Query: 192 LHHLIKA-GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+ L +A EA S F+RM +K G P+ TY I++ +C +V+ A+ + +EM +
Sbjct: 371 IKSLFEAKAPLSEASSWFERM-KKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEK 429
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G P Y +LIN+L + D A + FQE+ + ++++ + + G A
Sbjct: 430 GFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEA 489
Query: 311 VVLAQKIDKLRKTP 324
+ L ++ KL TP
Sbjct: 490 INLFNEMKKLGCTP 503
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 2/290 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + L+ K VE A + +M+ RR + +YT L+ G G+
Sbjct: 250 MKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGR 309
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ Y+ M DG +PDVV +IN + +A++LF EM+ NC P+ + T
Sbjct: 310 VEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNT 369
Query: 121 LINGLGSEKR-LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I L K LSEA +F + KK G P + TY+ ++ YC + R+ A +++EM +
Sbjct: 370 IIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEK 429
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P Y +++ L A R + A +F+ + G + Y ++++ F +++
Sbjct: 430 GFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCS-SARVYAVMIKHFGKCGRLNE 488
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A+ +++EMK G P ++ Y+ L+ + +++D+A F+ M + G P
Sbjct: 489 AINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTP 538
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 138/266 (51%), Gaps = 6/266 (2%)
Query: 13 FNRLIDTLCKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N +I +L +++ + A F++MKK P +Y+IL++G+ + + + EM
Sbjct: 367 YNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEM 426
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ GF P +Y +IN AKRYD A ELF+E++ S ++ +I G RL
Sbjct: 427 DEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRL 486
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+EA+ F + KK G P+ YNA++ + R+++A+ + M + G P+ +++I+
Sbjct: 487 NEAINLFNEMKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNII 546
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L+ L + G + A +F +M + +P V ++ ++ + A ++ EM ++G
Sbjct: 547 LNGLARTGGPKGALEMFTKM-KNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKG 605
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACK 277
+ YS+++ ++ K+DD CK
Sbjct: 606 FQYDLITYSSILEAV---GKVDD-CK 627
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 2/256 (0%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
K FE D +Y +I + + E + ++M +C +P ++ LG K +
Sbjct: 110 KRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMV 169
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKCGIGPNTRTYDI 190
+ AL F Q K R P A TYN+++ + + +EM + P+T TY
Sbjct: 170 NRALSVFYQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSA 229
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ K R + A +F M ++ G +PT Y ++ ++ +V+ A+ + EM+AR
Sbjct: 230 LISAFAKLNRDDSAIRLFDEM-KENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRAR 288
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
L + Y+ LI L +++DA ++ ML G +P L +NL L A
Sbjct: 289 RCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDA 348
Query: 311 VVLAQKIDKLRKTPLV 326
+ L ++ L P V
Sbjct: 349 IKLFDEMKLLNCAPNV 364
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 64/126 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G ++ +N L+ + ++ ++ A +F M++ PDI S+ I+L G +
Sbjct: 496 MKKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGG 555
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E++ +MK+ +PDVVS+ ++ A ++EA +L +EM + + + +
Sbjct: 556 PKGALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSS 615
Query: 121 LINGLG 126
++ +G
Sbjct: 616 ILEAVG 621
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G++++ N+L+D L K + +E A V D+ K S+ IL+ GW + +N
Sbjct: 272 MGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSS-VPLSSPSFNILINGWCKVRN 330
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+V E K+ GFEPDV +Y I ++C K + + E+ EM C P+ +
Sbjct: 331 FEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTI 390
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ G G +LS+AL+ + + KK G P+ P Y++++ + R+ DA + D+M K G
Sbjct: 391 LLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQG 450
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + TY+ ++ + E A + K M + +P + TY +++M C ++ +
Sbjct: 451 VVRDVVTYNTMISTACAHSKEETALRLLKEM-EETSCKPDLQTYHPLLKMCCKKKRMKVL 509
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ D M + P Y+ L+ SL + KL +AC +F+EM+ G P
Sbjct: 510 KFLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTP 558
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 136/285 (47%), Gaps = 2/285 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++D L K++ + ++ +MK+ + + + ++ + + + E +R M
Sbjct: 214 YNLMVDILGKAKEFDLMWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEAFRGMG 273
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G E D + +++A + + A + E +++ SP F LING +
Sbjct: 274 KYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPS-FNILINGWCKVRNFE 332
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + K+ GFEP+ TYN + +YC +++EMR G PN TY I+L
Sbjct: 333 KARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILL 392
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
KAG+ +A ++RM +K G P Y ++ + ++ A ++D+M +GV
Sbjct: 393 LGYGKAGQLSKALEEYERM-KKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGV 451
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ + Y+T+I++ C K + A + +EM + +P Q + L
Sbjct: 452 VRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPL 496
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ +N I++ C + + EV ++M+ P+ +YTILL G+G+ L
Sbjct: 345 GFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKA 404
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E Y MK DG PD Y ++ A R +A E+F +M + T+I+
Sbjct: 405 LEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMIST 464
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + AL+ + ++ +P+ TY+ ++ C R+ ++D M K + P+
Sbjct: 465 ACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPD 524
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
TY +++ L +G+ EA + F+ M K G P +T +++ R
Sbjct: 525 RGTYTLLVQSLSNSGKLVEACTFFEEMVSK-GFTPMETTVKLLTR 568
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 99/228 (43%), Gaps = 4/228 (1%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P+V Y +M++ AK +D +L +EM+ ++ +R +A++
Sbjct: 211 PEV--YNLMVDILGKAKEFDLMWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDAVEA 268
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F K G E + N ++ A I A+ ++DE K + ++ +++I+++ K
Sbjct: 269 FRGMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEF-KSSVPLSSPSFNILINGWCK 327
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
E+A V + ++ G EP V TY + +C++ + +EM+ G P
Sbjct: 328 VRNFEKARKVMEE-RKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAV 386
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y+ L+ +L A + ++ M GI P +S+L L G
Sbjct: 387 TYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAG 434
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 155/318 (48%), Gaps = 11/318 (3%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF L+DTL K +V+ A ++F++ +K +F+ + K YTIL+ GW + + + EM
Sbjct: 190 DFCYLLDTLSKYGYVKLASQIFNQ-RKFKFEANAKMYTILIYGWCKINRVSIAERLLGEM 248
Query: 72 KDDGFEPDVVSYGIMINAHCSAK------RYD----EAVELFREMEATNCKPSPHIFCTL 121
+ G +VV+Y +++N C R++ +A ++ EM +P + +
Sbjct: 249 VERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIV 308
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ + L K +G P TY +VV C R+ DA ++ +M K G+
Sbjct: 309 IHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGV 368
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY+ ++ A ++++M + P + TY I+V MF ++++
Sbjct: 369 SPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQ 428
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
IWD+MK G P + Y+ LI+ LC + K +AC +F EM++ G P F L + L
Sbjct: 429 EIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGL 488
Query: 302 RDEGMEETAVVLAQKIDK 319
M +T L +K+++
Sbjct: 489 IQSDMLKTWRRLKKKLEE 506
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 16/283 (5%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ----- 57
KF + + LI CK V A+ + +M +R ++ +Y +LL G +
Sbjct: 215 KFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLH 274
Query: 58 -----QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
++ + +V EM+ G EPDV SY I+I+ + A + + ++ R M+
Sbjct: 275 PDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIW 334
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA--- 169
P+ + +++ L S RL +A + K G P A TYN Y ++A
Sbjct: 335 PTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRL 394
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
YR M E C P+ TY+I++ +K R E ++ M + G P + +Y +++
Sbjct: 395 YRKMKEEYSC--LPDMHTYNILVGMFVKLNRMEIVQEIWDDM-KTSGAGPDLDSYTLLIH 451
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
C + A + EM +G LP + TL L D L
Sbjct: 452 GLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDML 494
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 126/285 (44%), Gaps = 48/285 (16%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--------------------- 117
DVVSY ++I+ +++D A + EM+ + +P+
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAF 175
Query: 118 ---------------FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
FC L++ L + A Q F Q +K FE A Y ++ +C
Sbjct: 176 DDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQ-RKFKFEANAKMYTILIYGWCK 234
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG---------RT-EEAYSVFKRMS 212
R++ A R++ EM + GJ N TY+++L+ + + RT +A V M
Sbjct: 235 INRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEM- 293
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
R+ G EP V++Y IV+ ++ + ++ + MK +G+ P + Y++++ LC +L
Sbjct: 294 RQXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRL 353
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+DA + +M+ G+ P ++ + R + A+ L +K+
Sbjct: 354 EDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKM 398
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 117/293 (39%), Gaps = 88/293 (30%)
Query: 5 GLKQELPDFNRLIDTLCKS----------RHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
GJ + +N L++ +C+ R + A++V D+M++ +PD+ SY+I++
Sbjct: 252 GJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVIHV 311
Query: 55 WGQ-QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY----------------- 96
+ + K L+++++ R MKD G P V +Y ++ CS R
Sbjct: 312 YSRAHKPELTLDKL-RMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSP 370
Query: 97 ------------------DEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
D A+ L+R+M E +C P H
Sbjct: 371 SAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMH--------------------- 409
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
TYN +VG + R+ + D+M+ G GP+ +Y +++H L +
Sbjct: 410 --------------TYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCE 455
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+ +EA F M K G P T+E + R Q DM ++ W +K +
Sbjct: 456 KQKWKEACHFFVEMIEK-GYLPQKITFETLYRGL---IQSDM-LKTWRRLKKK 503
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + +N L++ L S +E A+++ D MK+ + ++ +YT L++ +
Sbjct: 44 MKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGR 103
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++++EMKD G P+ +Y +I + + EA+EL+ EM+ C H +
Sbjct: 104 LQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNI 163
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I G L + + + +G P+ TYN ++ Y A+ ++ EM + G
Sbjct: 164 AIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAG 223
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+I+L K EA +F+ + K G P + TY ++ ++ + A
Sbjct: 224 YRPNIWTYNIMLSSARKEQSVAEATQLFENLKSK-GVVPNIVTYSAMLSLYGRHGLYTEA 282
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++WDEM G +P + YS LI S H +A FQ+M GI P ++++ L A
Sbjct: 283 AKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDA 342
Query: 301 LRDEG 305
G
Sbjct: 343 YGKAG 347
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 139/299 (46%), Gaps = 1/299 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A + + MK+ PD Y L+ G L + ++ +MK D ++V+Y
Sbjct: 34 LDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTN 93
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I + + R + +LF+EM+ P+ + LI G G + EAL+ + + G
Sbjct: 94 LIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVG 153
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+ TYN + Y + D R++DEM G+ P+ TY+ +L K +A+
Sbjct: 154 CAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAH 213
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ + M+ + G P + TY I++ V A ++++ +K++GV+P + YS +++
Sbjct: 214 EILREMT-EAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSL 272
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+A K + EM++ G P +S L ++ GM + A+ Q + K P
Sbjct: 273 YGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVP 331
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G+ + +N L+D K + +A E+ +M + + P+I +Y I+L ++++
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQS 243
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +K G P++V+Y M++ + Y EA +L+ EM C P +
Sbjct: 244 VAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSG 303
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G EAL F +K G P+ Y A++ AY + R +A + EM K G
Sbjct: 304 LIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEG 363
Query: 181 IGPNTRTYDIVLHHLIKAGR 200
P+ TY I++ AGR
Sbjct: 364 FVPDGITYGILVRAFANAGR 383
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G +++ +N I K +E + + D+M + PD +Y LL+ + ++
Sbjct: 149 MDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSY 208
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E+ REM + G+ P++ +Y IM+++ + EA +LF +++ P+ +
Sbjct: 209 FVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSA 268
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ G +EA + + + + G P Y+ ++ +Y +A +MRK G
Sbjct: 269 MLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSG 328
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
I P+T+ Y ++ KAGR EA ++ M+ K G P TY I+VR F
Sbjct: 329 IVPDTKIYTALMDAYGKAGRCREAELLYFEMT-KEGFVPDGITYGILVRAF 378
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 3/238 (1%)
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAK-RYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
YR MKD G E VV+Y ++I+ + K + D A+ L M+ + KP ++ L+NGL
Sbjct: 6 YRMMKD-GCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLV 64
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ RL A + K+ TY ++ Y + R+ D ++ EM+ G PN+
Sbjct: 65 NSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSW 124
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++ + G +EA ++ M G V TY I + M+ ++ R+ DE
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMD-GVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDE 183
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M +GV P Y+TL++ + A + +EM + G RP ++ + + R E
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKE 241
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 83/166 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +N ++ + K + V A ++F+ +K + P+I +Y+ +L +G+
Sbjct: 219 MTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGL 278
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ EM + G P +++Y +I ++ Y EA+ F++M + P I+
Sbjct: 279 YTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTA 338
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
L++ G R EA + + K GF P+ TY +V A+ + R+
Sbjct: 339 LMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFC-YNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
A S+F RM K G E TV TY +++ + +++D A+R+ + MK G P +Y+ L
Sbjct: 1 ACSLFYRM-MKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCL 59
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
+N L + +L+ A K +M + ++NL + + G + L Q++ +
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGE 119
Query: 323 TP 324
+P
Sbjct: 120 SP 121
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + +N +I + +S +VE A+ F +M+ PD+ +Y L+ G+ + N
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ ++K G P V++Y I+++ +C +EA +EM C+P +
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG + L+ +FF + +G +P+ YN + A ++A+++ + M G
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I +T TY+I L L K+G ++AY ++ +M G +P TY ++ C ++ A
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSD-GLQPDCITYTCLIHAHCERGRLREA 566
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I+D M G+ P Y+ I++ C L A +FQ+ML+ G+RP ++ L A
Sbjct: 567 RDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHA 626
Query: 301 L 301
L
Sbjct: 627 L 627
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 147/311 (47%), Gaps = 2/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ + GL + +N L+D C+ +E A+ +M ++ PD+ +YTIL+ G + +N
Sbjct: 398 LKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRN 457
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E + EM G +PD +Y I+A EA +L M + +
Sbjct: 458 LAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNI 517
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++GL L +A + + G +P+ TY ++ A+C R+ +A + D M G
Sbjct: 518 FLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSG 577
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY + +H + G AY F++M + G P TY +++ C + ++A
Sbjct: 578 LPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEE-GVRPNEVTYNVLIHALCRMGRTNLA 636
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + EM RG+ P + Y+ LI+ C E ++A + + EM GI P + L +
Sbjct: 637 YQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKG 696
Query: 301 LRDEGMEETAV 311
DEG + A+
Sbjct: 697 F-DEGQSKHAI 706
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 10/276 (3%)
Query: 32 VFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHC 91
F +M P IK ++L + M VY EM G EP +V+Y ++++
Sbjct: 183 AFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFF 242
Query: 92 SAKRYDEAVELFREMEA--TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ---SKKRGF 146
R D+A +L REMEA C PS + +INGL + L +A Q + SKK
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKK--- 299
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
A T+N ++ Y + A + EM GI P TY+ ++H + ++G E A
Sbjct: 300 -ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARM 358
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
F M R G P + TY ++ +C + A+ ++ ++K G+ P + Y+ L++
Sbjct: 359 KFVEM-RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGY 417
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
C L++A ++ QEM++ G +P ++ L R
Sbjct: 418 CRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSR 453
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 2/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I+ L + +E+A ++ D+M+ + ++ L+ G+ + ++ + EM+
Sbjct: 271 YNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEME 329
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G P VV+Y +I+ + + A F EM A P + +LING L
Sbjct: 330 NEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLK 389
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL FG K+ G P TYN ++ YC + +A R EM + G P+ TY I++
Sbjct: 390 EALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILM 449
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K F M K G +P Y + A ++ + M +RG+
Sbjct: 450 NGSRKVRNLAMVREFFDEMLSK-GLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGI 508
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y+ ++ LC L DA + +M+ G++P ++ L A + G
Sbjct: 509 SSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERG 561
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 132/291 (45%), Gaps = 4/291 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + + N ++ L + + V+ +M + +P I +Y LL+ + ++
Sbjct: 187 MAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGR 246
Query: 61 LLSMNEVYREM--KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ ++ REM + G P V+Y ++IN ++A +L M + K S F
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTF 305
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LI G + + +A + + G P TYN ++ S + A EMR
Sbjct: 306 NPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA 365
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P+ TY+ +++ KAG +EA +F + R G P+V TY I++ +C ++
Sbjct: 366 MGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRA-GLAPSVLTYNILLDGYCRLGDLE 424
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A R EM +G P + Y+ L+N L ++F EML G++P
Sbjct: 425 EARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQP 475
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 89/227 (39%), Gaps = 35/227 (15%)
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L F + G P N V+ A R +D + EM + GI P+ TY+ +L
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240
Query: 195 LIKAGRTEEAYSVFKRMSRKP-GTEPTVSTYEIVVRMFCYNAQVDMAMRIWD-------- 245
+ GR ++A + + M +P G P+ TY +V+ +++ A ++ D
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA 300
Query: 246 --------------------------EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
EM+ G++P + Y+T+I+ + ++ A F
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
EM +G+ P +++L G + A+ L + + P V
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSV 407
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 141/290 (48%), Gaps = 1/290 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK V A+EV + P Y L+ G+ Q L + +MK
Sbjct: 342 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 401
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD ++Y +IN C A+R A +L EM+ P+ F TLI+ G +L +
Sbjct: 402 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 461
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ ++ G +P +Y ++V A+C + +I +A ++D+M + PN + Y+ ++
Sbjct: 462 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 521
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
++ G ++A+ + ++M + G P++ TY ++++ C +Q+ A I + + ++P
Sbjct: 522 VEHGPNDQAFILVEKM-KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 580
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y+TLI++ C+ +D A Q M GI+ + + L L G
Sbjct: 581 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 630
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 152/320 (47%), Gaps = 1/320 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +N L+ LC++ + + D+M ++ PD +Y+IL +G + + +M
Sbjct: 261 GLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAM 320
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ + +G + I++N C + A E+ + + P+ I+ TLING
Sbjct: 321 LSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 380
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A FGQ K R +P+ TYNA++ C + RI +A ++ EM+ G+ P
Sbjct: 381 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 440
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ + G+ E+ + V M ++ G +P V +Y +V FC N ++ A+ I
Sbjct: 441 VETFNTLIDAYGRTGQLEKCFIVLSEM-QENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 499
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M + VLP +Y+ +I++ D A ++M GI P ++ L + L ++
Sbjct: 500 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 559
Query: 305 GMEETAVVLAQKIDKLRKTP 324
A + + R P
Sbjct: 560 SQISEAEEIINSLSNHRLIP 579
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 147/349 (42%), Gaps = 36/349 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I + ++ A EVFD+M +R P+ +Y +++G + +L + + +M
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+ ++Y ++++ C A R E L EM + P + L +GL
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318
Query: 133 EALQFFGQSKKRGFE-----------------------------------PEAPTYNAVV 157
L FG+S K G P YN ++
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + + A+ +M+ I P+ TY+ +++ L KA R A + M + G
Sbjct: 379 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM-QDNGV 437
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
PTV T+ ++ + Q++ + EM+ G+ P + Y +++N+ C K+ +A
Sbjct: 438 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 497
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+M + P Q+++ + A + G + A +L +K+ +P +
Sbjct: 498 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSI 546
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 131/295 (44%), Gaps = 36/295 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ LCK+ + AQ++ +M+ +P ++++ L++ +G+ L V EM+
Sbjct: 409 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 468
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G +P+VVSYG ++NA C + EAV + +M
Sbjct: 469 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDM-------------------------- 502
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ P A YNA++ AY + A+ ++++M+ GI P+ TY++++
Sbjct: 503 ---------FHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + EA + +S P +Y ++ CY +D A+ + M G+
Sbjct: 554 KGLCNQSQISEAEEIINSLSNHR-LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 612
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+ Y LI+ L +L + +Q+M+ + P + + + +A G E
Sbjct: 613 KSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNE 667
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 139/344 (40%), Gaps = 37/344 (10%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP-DVV 81
RH + + F + PD ++ ++ +L + R M DG P +
Sbjct: 139 GRHAD-VRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 197
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
SY ++I A R +AVE+F EM P+ + T+I+G L Q
Sbjct: 198 SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQM 257
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
G +P A TYN ++ C + R+ + ++DEM + P+ TY I+ L + G +
Sbjct: 258 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 317
Query: 202 EEAYSVFKRMSR----------------------------------KPGTEPTVSTYEIV 227
+ S+F + + G PT Y +
Sbjct: 318 KAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 377
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +C +++ A + +MK+R + P Y+ LIN LC +++ +A EM D G+
Sbjct: 378 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 437
Query: 288 RPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTPLVDRGQ 330
P + F+ L A G +E+ +VL++ + K +V G
Sbjct: 438 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 481
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + + +++ CK+ + A + D M + P+ + Y +++ + +
Sbjct: 467 MQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGP 526
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +MK +G P +V+Y ++I C+ + EA E
Sbjct: 527 NDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE------------------- 567
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN L + + + P+A +YN ++ A C+ I+ A + M K G
Sbjct: 568 IINSLSNHRLI----------------PDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 611
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
I RTY ++ L AGR E ++++M + P+ + + I+V +
Sbjct: 612 IKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQN-NVVPSNAIHNIMVEAY 661
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 158/309 (51%), Gaps = 12/309 (3%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFD----PDIKSYTILLEGWGQQKNLLSMNEVYREM 71
L+D+LCK V A E F + K+ D P I+ Y I+L GW + + L ++ EM
Sbjct: 246 LMDSLCKEGSVREASEYF--LWKKELDLSWVPSIRVYNIMLNGWFRLRKLKQGERLWAEM 303
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
K++ P VV+YG ++ +C +R ++A+E+ +M P+ ++ +I+ L R
Sbjct: 304 KEN-MRPTVVTYGTLVEGYCRMRRVEKALEMVGDMTKEGIAPNAIVYNPIIDALAEAGRF 362
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EAL + P TYN++V +C + + A +++ M G P+ TY+
Sbjct: 363 KEALGMLERFHVLEIGPTDSTYNSLVKGFCKAGDLVGASKILKMMISRGFLPSATTYNYF 422
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ + + EE +++ ++ + G P TY ++V+M C ++D+A+++ EM+ G
Sbjct: 423 FRYFSRCRKIEEGMNLYTKLIQS-GYTPDRLTYHLLVKMLCEEEKLDLAVQVSKEMRHNG 481
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ + L++ LC +L++A F++M+ GI P F +K L+ +GM E
Sbjct: 482 YDMDLATSTMLVHLLCKVRRLEEAFVEFEDMIRRGIVPQYLTFQRMKADLKKQGMTE--- 538
Query: 312 VLAQKIDKL 320
+AQK+ KL
Sbjct: 539 -MAQKLCKL 546
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 87/200 (43%), Gaps = 35/200 (17%)
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L E++ +P P + + + GS +L +L + Q++ F P ++AVV A
Sbjct: 111 LHAELDRAGIEPDPALLLAVFDRFGSSPKLLHSLFLWAQTRP-AFRPGPKLFDAVVNALA 169
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ + A+++ VLHH A + E +R+ +V
Sbjct: 170 KAREFDAAWKL------------------VLHH---AEKDGEEEGEKERLV-------SV 201
Query: 222 STYEIVVRMFCYNAQVDMAMRIWD-EMKARGVLPV---MHMYSTLINSLCHEDKLDDACK 277
T+ I++R + +A+R ++ + ++ M + L++SLC E + +A +
Sbjct: 202 GTFAIMIRRYARAGMSKLAIRTYEFATNNKSIVDSGSEMSLLEILMDSLCKEGSVREASE 261
Query: 278 YF--QEMLDIGIRPPGQLFS 295
YF ++ LD+ P ++++
Sbjct: 262 YFLWKKELDLSWVPSIRVYN 281
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 146/312 (46%), Gaps = 36/312 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I LCK ++ A +V ++MK PD+ +Y+IL+ G+ +Q ++ + EMK
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFR---------------------------- 104
EP +VSY + + C + D ++++FR
Sbjct: 388 YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLD 447
Query: 105 -------EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
EM N P P F +L++G AL+FF + G P T N ++
Sbjct: 448 SAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVII 507
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
A+C R+ +A +M+EM+ GI PN TY+ V++ L K ++E A +F M ++
Sbjct: 508 DAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKR-NV 566
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P+V Y ++ F + A+ ++ M GV P M Y+ LIN LCH ++ +A
Sbjct: 567 LPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYN 626
Query: 278 YFQEMLDIGIRP 289
F++M + G+ P
Sbjct: 627 LFKKMTENGMTP 638
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 162/325 (49%), Gaps = 3/325 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + ++ I LC+ +VE A + + ++ Y ++ G ++
Sbjct: 281 MERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGE 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +V EMK G PDV +Y I+I+ C ++ + L EM+ +N +PS + +
Sbjct: 341 LDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSS 400
Query: 121 LINGLGSEKRLSE-ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L +GL +KRLS+ +L F G++ + Y+ ++ +C ++ A+++M+EM +
Sbjct: 401 LFHGL-CKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRN 459
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ P+ ++ ++H K G A F M + G P+++T +++ C +V+
Sbjct: 460 NLAPDPSNFESLVHGFCKMGLWVNALEFFNMM-LEGGILPSIATCNVIIDAHCREGRVEE 518
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ + +EM+ +G+ P + Y+ +IN LC E K + A + F ML + P ++S L
Sbjct: 519 ALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLID 578
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
+ + A++L ++ K+ TP
Sbjct: 579 GFAKQSNSQKALMLYARMLKIGVTP 603
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 1/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + ++ LI C ++ A ++ ++M + PD ++ L+ G+ + ++
Sbjct: 425 GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNA 484
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E + M + G P + + ++I+AHC R +EA+ L EM+ P+ + +IN
Sbjct: 485 LEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINR 544
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E++ AL+ F KR P Y+ ++ + A + M K G+ P+
Sbjct: 545 LCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPD 604
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y I+++ L R EAY++FK+M+ G P +Y V+ FC + A ++
Sbjct: 605 MVAYTILINILCHRSRMCEAYNLFKKMTEN-GMTPDKISYTSVIAGFCRIGDMRKAWALF 663
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+EM RG LP + Y++L++ C +++D A EM GI P ++ L A R
Sbjct: 664 NEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRR 723
Query: 305 GMEETAV 311
G + A+
Sbjct: 724 GNLDKAL 730
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 149/307 (48%), Gaps = 1/307 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + L + +F L+ CK A E F+ M + P I + ++++ ++
Sbjct: 456 MVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGR 515
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM+ G P++ +Y +IN C ++ + A+ELF M N PS ++ T
Sbjct: 516 VEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYST 575
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + +AL + + K G P+ Y ++ C R+ +AY + +M + G
Sbjct: 576 LIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENG 635
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y V+ + G +A+++F M ++ G PTV TY +V +C ++D+A
Sbjct: 636 MTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQR-GHLPTVVTYTSLVDGYCKMNRIDIA 694
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ DEMK +G+ P + Y+ LI + LD A + EM + G+ P + L+
Sbjct: 695 DMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMMLEWL 754
Query: 301 LRDEGME 307
L+ + ++
Sbjct: 755 LKAKKLK 761
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 7/305 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LI + +E A +VF + KK + +S LL+ + + ++ EMK
Sbjct: 182 FDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMK 241
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYD------EAVELFREMEATNCKPSPHIFCTLINGLG 126
G P+V +Y IM+N +C + +A E+ EME P+ + T I GL
Sbjct: 242 STGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLC 301
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ AL F YNA++ C +++A ++++EM+ CGI P+
Sbjct: 302 RVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVY 361
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I++H K G E+ + + M + EP++ +Y + C D+++ I+ +
Sbjct: 362 TYSILIHGFCKQGDVEKGLYLIEEM-KYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRD 420
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
+ A G YS LI C + LD A K +EM+ + P F +L G+
Sbjct: 421 LGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGL 480
Query: 307 EETAV 311
A+
Sbjct: 481 WVNAL 485
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 149/321 (46%), Gaps = 7/321 (2%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK--- 59
K GL+ N L+ L ++ E + +F++MK P++ +YTI++ + +
Sbjct: 207 KTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGE 266
Query: 60 ---NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+ E+ EM+ +G P VV+Y I C + A++ R + + N + +
Sbjct: 267 ADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVY 326
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ +I+GL + L EAL+ + K G P+ TY+ ++ +C + +++EM
Sbjct: 327 CYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEM 386
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ + P+ +Y + H L K ++ + +F+ + G + + Y I+++ FC
Sbjct: 387 KYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLG-AAGYKYDQTAYSILIKGFCMQGD 445
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+D A ++ +EM + P + +L++ C +A ++F ML+ GI P +
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNV 505
Query: 297 LKQALRDEGMEETAVVLAQKI 317
+ A EG E A+ L ++
Sbjct: 506 IIDAHCREGRVEEALNLMNEM 526
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 12/279 (4%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD-EAVELFREM 106
++ ++ +G +++ + V + G +V Y ++ + C + + +A ELF +
Sbjct: 111 FSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEV--YALLRDIVCYYNKVNLDAFELFPIL 168
Query: 107 --EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
+ S +F LI + L A+ F Q+KK G E + N ++ +
Sbjct: 169 LESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEAN 228
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG------RTEEAYSVFKRMSRKPGTE 218
R + +EM+ G PN TY I+++ K T +A + + M R G
Sbjct: 229 RREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERN-GES 287
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
PTV TY + C V+ A+ + + L ++ Y+ +I+ LC + +LD+A K
Sbjct: 288 PTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKV 347
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+EM GI P +S L +G E + L +++
Sbjct: 348 LEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEM 386
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 152/308 (49%), Gaps = 1/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +ID LCK+ VE A F +M PDI ++T L+ G
Sbjct: 321 MRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGE 380
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + G P+ + ++++ C R EA + F ++ KP +
Sbjct: 381 WKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTI 440
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + ++ E+++ G+ G P+ TY+A++ YC + R++DA + EM
Sbjct: 441 LIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKD 500
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+I+LH L AGR A + ++ G + ++TY IV+ C N+ VD A
Sbjct: 501 VKPNAITYNIILHGLFHAGRVVAAREFYMKIV-DSGIQLGINTYNIVLGGLCENSFVDEA 559
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R++ ++++ + ++ +I L ++ DA F +L G+ P ++ + Q+
Sbjct: 560 LRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQS 619
Query: 301 LRDEGMEE 308
+EG+ E
Sbjct: 620 HIEEGLLE 627
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ ++ ++ LID CK A+ +FD M +R +PD +Y LL G+ +
Sbjct: 216 MSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGA 275
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ M+++ M DG + + I+I A+ + D+A+ F EM P+ + T
Sbjct: 276 LVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTT 335
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L R+ +A+ F Q G P+ T+ +++ C ++ EM G
Sbjct: 336 VIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRG 395
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN + ++ L K GR EA+ F ++ G +P V +Y I++ +C + ++D +
Sbjct: 396 IHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIH-VGVKPDVVSYTILIDGYCLDGKMDES 454
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M + G+ P YS L+N C ++DDA ++EM ++P ++ +
Sbjct: 455 IKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHG 514
Query: 301 LRDEG 305
L G
Sbjct: 515 LFHAG 519
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 146/304 (48%), Gaps = 17/304 (5%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D + + +N +I+ L K V++A +F +M + F P+I +Y +++G + + +
Sbjct: 131 DGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAM 190
Query: 62 LSMNEVYREMKD----------------DGFEPDVVSYGIMINAHCSAKRYDEAVELFRE 105
V ++M D G +PDVV+Y ++I+ +C R EA +F
Sbjct: 191 DKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDS 250
Query: 106 MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
M P + + TL++G ++ L + + G E +N ++ AY +
Sbjct: 251 MVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNET 310
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++ A EMR+ G PN TY V+ L KAGR E+A S F +M + G P + T+
Sbjct: 311 LDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSE-GLSPDIITFT 369
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
++ C + ++ EM RG+ P +T+++SLC E ++ +A +F +++ +
Sbjct: 370 SLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHV 429
Query: 286 GIRP 289
G++P
Sbjct: 430 GVKP 433
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 131/270 (48%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N ++D+LCK V A + FD++ PD+ SYTIL++G+ + ++ M
Sbjct: 403 LNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMV 462
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD V+Y ++N +C R D+A+ L+REM + + KP+ + +++GL R+
Sbjct: 463 SIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVV 522
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A +F+ + G + TYN V+G C + +++A RM +R RT++I++
Sbjct: 523 AAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMI 582
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR +A S+F + G P Y ++++ ++ + ++ M+ G
Sbjct: 583 VGLLKVGRIGDAKSLFSAI-LPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGC 641
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ ++ L + + A Y ++
Sbjct: 642 TANSRTLNAIVRKLLEKGDVRRAGTYLTKI 671
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 98/214 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ + ++ L++ CK+ V+ A ++ +M + P+ +Y I+L G
Sbjct: 461 MVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGR 520
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ E Y ++ D G + + +Y I++ C DEA+ +F+ + + + F
Sbjct: 521 VVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNI 580
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL R+ +A F G P+A Y ++ ++ + ++ + M K G
Sbjct: 581 MIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNG 640
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
N+RT + ++ L++ G A + ++ K
Sbjct: 641 CTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEK 674
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 70/148 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + +N ++ LC++ V+ A +F ++ + F +++++ I++ G + +
Sbjct: 535 GIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDA 594
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ + G PD + YG+MI +H +E+ ELF ME C + ++
Sbjct: 595 KSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRK 654
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
L + + A + + ++ + EA T
Sbjct: 655 LLEKGDVRRAGTYLTKIDEKEYSVEAST 682
>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g43820-like [Glycine max]
Length = 505
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 2/321 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+D G++++ N L+ LC+ HV A V + MK + D D+ +Y + GW +
Sbjct: 171 LDDLGVRRDTEALNVLLLCLCRRSHVGAANSVLNSMKGK-VDFDVGTYNAVAGGWSRFGR 229
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + V REM+ DG PD ++G +I R DEAVE+ M+ NC+P +
Sbjct: 230 VSEVERVMREMEADGLRPDCRTFGFLIEGLGREGRMDEAVEILCGMKEMNCQPDTETYNA 289
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I S E ++++ + EP TY ++ + + ++ DA M DEM + G
Sbjct: 290 VIFNFVSVGDFEECIKYYNRMLSDNCEPNLDTYARMINRFLRARKVADALLMFDEMLRRG 349
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T T + L G A ++K+ +RK G ++ Y+I++ +
Sbjct: 350 VVPSTGTITTFIKRLCSYGPPYAALMIYKK-ARKLGCVISMEAYKILLMRLSMVGKCGTL 408
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ IW+EM+ G + +Y +I+ LC+ +L++A +E L G P ++S L
Sbjct: 409 LSIWEEMQECGYSSDLEVYECIISGLCNVGQLENAVLVMEEALRKGFCPSRLVYSKLSNR 468
Query: 301 LRDEGMEETAVVLAQKIDKLR 321
L E A L KI R
Sbjct: 469 LLASDKSERAYKLFLKIKXAR 489
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 108/274 (39%), Gaps = 35/274 (12%)
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG- 139
V Y +++ A K +D ++ +M + +++ +S A+Q FG
Sbjct: 111 VXYHVIVKALGRRKFFDFMMDALCDMRRNAIDGDLFMLSVVVDSFVRAGHVSRAIQVFGN 170
Query: 140 ---------------------------------QSKKRGFEPEAPTYNAVVGAYCWSMRI 166
S K + + TYNAV G + R+
Sbjct: 171 LDDLGVRRDTEALNVLLLCLCRRSHVGAANSVLNSMKGKVDFDVGTYNAVAGGWSRFGRV 230
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
++ R+M EM G+ P+ RT+ ++ L + GR +EA + M ++ +P TY
Sbjct: 231 SEVERVMREMEADGLRPDCRTFGFLIEGLGREGRMDEAVEILCGM-KEMNCQPDTETYNA 289
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
V+ F + ++ ++ M + P + Y+ +IN K+ DA F EML G
Sbjct: 290 VIFNFVSVGDFEECIKYYNRMLSDNCEPNLDTYARMINRFLRARKVADALLMFDEMLRRG 349
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+ P + + L G A+++ +K KL
Sbjct: 350 VVPSTGTITTFIKRLCSYGPPYAALMIYKKARKL 383
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/179 (17%), Positives = 77/179 (43%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L + R+I+ ++R V A +FD+M +R P + T ++ + +Y+
Sbjct: 319 LDTYARMINRFLRARKVADALLMFDEMLRRGVVPSTGTITTFIKRLCSYGPPYAALMIYK 378
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+ + G + +Y I++ + + ++ EM+ ++ +I+GL +
Sbjct: 379 KARKLGCVISMEAYKILLMRLSMVGKCGTLLSIWEEMQECGYSSDLEVYECIISGLCNVG 438
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+L A+ ++ ++GF P Y+ + S + AY++ +++ N + Y
Sbjct: 439 QLENAVLVMEEALRKGFCPSRLVYSKLSNRLLASDKSERAYKLFLKIKXARSLENAKKY 497
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 150/321 (46%), Gaps = 34/321 (10%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
++G ++ +N LI+ CK + A+ +F++++KR P S+ L+ G + +NL
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ + M+++ PDV +Y ++I+ C R D A +LF EM+ +P+ F LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +R+ A+ + Q G +P+ YN ++ C +N A +++DEM+ G+
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMK 395
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK---------------------------- 214
P+ TY ++ K G E A + K M+ +
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 215 ------PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
G +P +TY +V+ +C V M ++ EM+ G P + Y+ L+N LC
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515
Query: 269 EDKLDDACKYFQEMLDIGIRP 289
+ ++ +A + ML++G+ P
Sbjct: 516 QGQMKNANMLLEAMLNLGVTP 536
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 131/274 (47%), Gaps = 1/274 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+D + S + ++ + F P ++ Y IL+ + ++ ++ ++ E++ G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P VS+ +IN C ++ DE L + ME P + LI+GL E RL A
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q F + ++RG P T+ A++ S R++ A +M G+ P+ Y+ +L+ L
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G +A + M + G +P TY ++ +C ++ AM I M GV+
Sbjct: 374 CKVGDVNKARKLVDEM-KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ LI+ C + ++ DA + +EM++ G++P
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L+ S V A + F ++ F LL+ + +++ Y E+
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF P V Y I+IN C +A +F E+ +P+ F TLINGL + L
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + ++ P+ TY+ ++ C R++ A ++ DEM++ G+ PN T+ ++
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
++ R + A + + +M G +P + Y ++ C V+ A ++ DEMK G+
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTM-GVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGM 394
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P Y+TLI+ C E L+ A + + M + G+ F+ L +G
Sbjct: 395 KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 127/264 (48%), Gaps = 4/264 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ F LID +SR ++ A + +M PD+ Y LL G + +
Sbjct: 319 MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EMK G +PD ++Y +I+ +C + A+E+ + M F
Sbjct: 379 VNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTA 438
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + R+ +A + + + G +P+ TY V+ YC + ++++ EM+ G
Sbjct: 439 LISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P TY+++++ L K G+ + A + + M G P TY I++ C N + +
Sbjct: 499 HKPGVITYNVLMNGLCKQGQMKNANMLLEAM-LNLGVTPDDITYNILLEGHCKNGKAEDL 557
Query: 241 MRIWDEMKARGVLPVMHMYSTLIN 264
+++ +E +G++ Y++L++
Sbjct: 558 LKLRNE---KGLIVDYAYYTSLVS 578
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 185 TRTYDIVLHHLIKA----GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TR + V L+ A G +A F+ + P ++ +M N+ V +
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTI- 207
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ E+ G P + Y+ LIN C E + DA F E+ G+RP F+ L
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267
Query: 301 L 301
L
Sbjct: 268 L 268
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 147/302 (48%), Gaps = 9/302 (2%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
E+ FN L+D LCK V+ + + +M+ R PD ++ +L GW + ++ ++
Sbjct: 131 EINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAMKLL 189
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM---EATNCKPSPHIFCTLINGL 125
EM + G +P+ +Y I+ C A DEA +LF M + P+ F +I L
Sbjct: 190 EEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVAL 249
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ E + G+ G P+ TY V+ C + ++++AY+ +DEM G P+
Sbjct: 250 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI 309
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ L L + +T+EA ++ RM + P+V TY +++ MF D A W
Sbjct: 310 VTYNCFLRVLCENRKTDEALKLYGRMV-ESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 368
Query: 246 EMKARGVLPVMHMYSTLINSL--CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM R + + Y +IN L CH K +AC +E+++ G++ P ++F + L +
Sbjct: 369 EMDKRDCVQDVETYCAMINGLFDCHRAK--EACFLLEEVVNKGLKLPYRVFDSFLMRLSE 426
Query: 304 EG 305
G
Sbjct: 427 VG 428
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
+P++ ++ ++++A C E L R M KP + F L G + +A++
Sbjct: 129 QPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMK 187
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG---PNTRTYDIVLH 193
+ + G +PE TY A + +C + +++A + D M G P +T+ +++
Sbjct: 188 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 247
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K + EE + + RM G P VSTY+ V+ C +VD A + DEM +G
Sbjct: 248 ALAKNDKAEECFELIGRMI-STGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 306
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P + Y+ + LC K D+A K + M++ P Q ++ L
Sbjct: 307 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 350
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 5/237 (2%)
Query: 94 KRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
+RY V+ F + + K P I F L++ L + E + + R +P+A
Sbjct: 109 ERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDAN 167
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
T+N + +C A ++++EM + G P TY + +AG +EA +F M
Sbjct: 168 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 227
Query: 212 SRKPG--TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
K + PT T+ +++ N + + + M + G LP + Y +I +C
Sbjct: 228 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 287
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+K+D+A K+ EM + G P ++ + L + + A+ L ++ + R P V
Sbjct: 288 EKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSV 344
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR---RFDPDIKSYTILLEGWGQQKNL 61
G K E + IDT C++ V+ A ++FD M + P K++ +++ +
Sbjct: 196 GHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKA 255
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
E+ M G PDV +Y +I C A++ DEA + EM P +
Sbjct: 256 EECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCF 315
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+ L ++ EAL+ +G+ + P TYN ++ + + A+ EM K
Sbjct: 316 LRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDC 375
Query: 182 GPNTRTYDIVLHHLIKAGRTEEA 204
+ TY +++ L R +EA
Sbjct: 376 VQDVETYCAMINGLFDCHRAKEA 398
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 36/342 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ K V +A ++ MK ++K+Y++L+ G+ + K+ +
Sbjct: 444 GFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANA 503
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ + DG +PDVV Y +I A C D A+ + ++M+ +P+ F +I+G
Sbjct: 504 FSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHG 563
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ AL+ F ++ G P TYNA++ ++ A ++D+M G+GPN
Sbjct: 564 FARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPN 623
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR--------------- 229
TY ++ G TE+A+ F + R G E V TYE +++
Sbjct: 624 EHTYTTLMQGYASLGDTEKAFQYFSVL-RNEGLEIDVYTYEALLKSCCKSGRMQSALAVT 682
Query: 230 -----------MFCYNAQVDMAMR---IWD------EMKARGVLPVMHMYSTLINSLCHE 269
F YN +D R +W+ +M+ GVLP +H Y++ +N+ C
Sbjct: 683 KEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKA 742
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ A + QEM GI+P + ++ L M E A+
Sbjct: 743 GDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKAL 784
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 154/316 (48%), Gaps = 6/316 (1%)
Query: 7 KQELPDFN-----RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
K++LP N +I C++ +++RA+ + +M+ + D I Y +++G+ N
Sbjct: 371 KEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNE 430
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
V+ +K+ GF P V+SYG +IN + + +A+++ + M+ + K + + L
Sbjct: 431 EKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSML 490
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
ING K + A F K G +P+ YN ++ A+C ++ A M+ +M+K
Sbjct: 491 INGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERY 550
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P TRT+ ++H +AG A +F M R+ G PTV TY ++ ++ A+
Sbjct: 551 RPTTRTFLPIIHGFARAGEMRRALEIFDMM-RRSGCIPTVHTYNALILGLVEKRKMAKAV 609
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I D+M GV P H Y+TL+ + A +YF + + G+ + L ++
Sbjct: 610 AILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSC 669
Query: 302 RDEGMEETAVVLAQKI 317
G ++A+ + +++
Sbjct: 670 CKSGRMQSALAVTKEM 685
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 1/299 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GLK ++ +N +I C +++RA + +M+K R+ P +++ ++ G+ + +
Sbjct: 512 KDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMR 571
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E++ M+ G P V +Y +I ++ +AV + +M P+ H + TL+
Sbjct: 572 RALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLM 631
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
G S +A Q+F + G E + TY A++ + C S R+ A + EM I
Sbjct: 632 QGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIP 691
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
NT Y+I++ + G EA + ++M RK G P + TY V C + A
Sbjct: 692 RNTFVYNILIDGWARRGDVWEAADLMQQM-RKEGVLPDIHTYTSFVNACCKAGDMQKATE 750
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I EM+A G+ P + Y+TLIN + A F+EM ++P + L +L
Sbjct: 751 IIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSL 809
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 42/348 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ LI R +E A KMK+ + I +Y+I++ G+ +
Sbjct: 300 MQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGK 359
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++E K+ + V+YG +I AHC D A L REME I+ T
Sbjct: 360 ADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHT 419
Query: 121 LING---LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+++G +G+E++ L F + K+ GF P +Y ++ Y +++ A ++ M+
Sbjct: 420 MMDGYTMIGNEEK---CLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMK 476
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI N +TY ++++ +K A+SVF+ + K G +P V Y ++ FC + +
Sbjct: 477 MSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFT-KDGLKPDVVLYNNIITAFCGMSNM 535
Query: 238 D-----------------------------------MAMRIWDEMKARGVLPVMHMYSTL 262
D A+ I+D M+ G +P +H Y+ L
Sbjct: 536 DRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNAL 595
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
I L + K+ A +M G+ P ++ L Q G E A
Sbjct: 596 ILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKA 643
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LI L + R + +A + D+M P+ +YT L++G+ +
Sbjct: 580 MRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGD 639
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++++G E DV +Y ++ + C + R A+ + +EM A N + ++
Sbjct: 640 TEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNTFVYNI 699
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + EA Q +K G P+ TY + V A C + + A ++ EM G
Sbjct: 700 LIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFG 759
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
I PN +TY +++ +A E+A S F+ M
Sbjct: 760 IKPNLKTYTTLINGWARASMPEKALSCFEEM 790
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 146/312 (46%), Gaps = 7/312 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F ++++T + + + F+++KK P K Y ++++ + ++ ++ + + M+
Sbjct: 248 FQKVLET--QPENWQAVVTAFERIKK----PARKEYGLMVKYYARRGDMHHARQTFESMQ 301
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP Y +I+A+ + +EA+ R+M+ + + + ++ G +
Sbjct: 302 ARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKAD 361
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A +F ++K++ A TY +++ A+C + ++ A ++ EM GI Y ++
Sbjct: 362 AADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMM 421
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
G E+ VF R+ ++ G P+V +Y ++ ++ +V A++I MK G+
Sbjct: 422 DGYTMIGNEEKCLIVFDRL-KECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGI 480
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
M YS LIN +A F++ G++P L++N+ A + A+
Sbjct: 481 KHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAIC 540
Query: 313 LAQKIDKLRKTP 324
+ +++ K R P
Sbjct: 541 MVKQMQKERYRP 552
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID + V A ++ +M+K PDI +YT + + ++ E+ +EM+
Sbjct: 697 YNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEME 756
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P++ +Y +IN A ++A+ F EM+ KP + L+ L S +
Sbjct: 757 AFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFA 816
Query: 133 EALQFFG 139
++ + G
Sbjct: 817 QSYVYSG 823
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 49/99 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ ++ + ++ CK+ +++A E+ +M+ P++K+YT L+ GW +
Sbjct: 720 MRKEGVLPDIHTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASM 779
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
+ EMK +PD +Y ++ + S + ++
Sbjct: 780 PEKALSCFEEMKLAELKPDKAAYHCLMTSLLSRATFAQS 818
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 146/292 (50%), Gaps = 6/292 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID LC+S ++E AQ + ++M + PD+ +YT LL+G+ + NL E+Y EM
Sbjct: 448 YNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEML 507
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK-PSPHIFCTLINGLGSEKRL 131
G +PD +Y ++A L EM A + P I+ I+GL L
Sbjct: 508 RKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNL 567
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A++F + + G P+ TY V+ Y R A + DEM + P+ TY ++
Sbjct: 568 EKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVL 627
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H KAGR E+A+ M +K G P V T+ ++ C +D A R +M+ G
Sbjct: 628 IHGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEG 686
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG----QLFSNLKQ 299
+ P + Y+ LI+ C DK ++ K ++EMLD I P G LF +L++
Sbjct: 687 ISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 738
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 140/295 (47%), Gaps = 5/295 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + N ++ L SR + +AQEV++ M P + ++ +L+ + +
Sbjct: 230 MIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGD 289
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++++ EMK E V+Y I+IN + + +EA +M+ + +P+ F
Sbjct: 290 LERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNP 349
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + EA + G P TYN + A C RI+DA ++ M
Sbjct: 350 LIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM---- 405
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+ ++H IK + EA +F + + P++ TY ++ C + ++ A
Sbjct: 406 AAPDVVSYNTLMHGYIKMRKFVEASLLFDDL-KAGNINPSIVTYNTLIDGLCESGNLEGA 464
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
R+ +EM ++ + P + Y+TL+ L A + + EML GI+P G ++
Sbjct: 465 QRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYT 519
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 135/284 (47%), Gaps = 5/284 (1%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
K E+ F+KM ++ F P +++ I+L + + EVY M G P V+
Sbjct: 216 KKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVI 275
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
++ M+++ A + +++ EM+ N + S + LING ++ EA +F G
Sbjct: 276 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDM 335
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
++ GF ++N ++ YC ++A+ + DEM GI P T TY+I + L + GR
Sbjct: 336 QRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRI 395
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
++A + M+ P V +Y ++ + + A ++D++KA + P + Y+T
Sbjct: 396 DDARELLSSMA-----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNT 450
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LI+ LC L+ A + +EM I P ++ L + G
Sbjct: 451 LIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNG 494
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 6/315 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ KS +E A+ M++ F S+ L+EG+ +Q V EM
Sbjct: 312 YNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEML 371
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P +Y I I A C R D+A EL M A P + TL++G ++
Sbjct: 372 NAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMRKFV 427
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F K P TYN ++ C S + A R+ +EM I P+ TY +L
Sbjct: 428 EASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLL 487
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+K G A ++ M RK G +P Y + A R+ +EM A
Sbjct: 488 KGFVKNGNLSMATEIYDEMLRK-GIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDH 546
Query: 253 -LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + +Y+ I+ LC L+ A ++ +++ +G+ P ++ + + ++G + A
Sbjct: 547 HAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMAR 606
Query: 312 VLAQKIDKLRKTPLV 326
L ++ R +P V
Sbjct: 607 DLYDEMLSKRLSPSV 621
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 136/325 (41%), Gaps = 41/325 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G FN LI+ CK + A V D+M P +Y I + +
Sbjct: 335 MQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGR 394
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ M PDVVSY +++ + +++ EA LF +++A N PS + T
Sbjct: 395 IDDARELLSSMA----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNT 450
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL L A + + + P+ TY ++ + + ++ A + DEM + G
Sbjct: 451 LIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKG 510
Query: 181 IGPN-----TRT-------------------------------YDIVLHHLIKAGRTEEA 204
I P+ TRT Y++ + L K G E+A
Sbjct: 511 IKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKA 570
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
F+R + G P TY V+R + + MA ++DEM ++ + P + Y LI+
Sbjct: 571 IE-FQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIH 629
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRP 289
+L+ A +Y EM G+RP
Sbjct: 630 GHAKAGRLEQAFQYSTEMKKRGVRP 654
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 92/189 (48%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L +N ID LCK ++E+A E K+ + PD +YT ++ G+ ++ ++Y
Sbjct: 550 DLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLY 609
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
EM P V++Y ++I+ H A R ++A + EM+ +P+ L++G+
Sbjct: 610 DEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKA 669
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ EA ++ + ++ G P +Y ++ +C + + ++ EM I P+ T+
Sbjct: 670 GNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTH 729
Query: 189 DIVLHHLIK 197
+ HL K
Sbjct: 730 RALFKHLEK 738
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 127 SEKRLSE-ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++K ++E L F + ++GF P N V+ S +N A + + M GI P
Sbjct: 215 TKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTV 274
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T++ +L KAG E ++ M R+ E + TY I++ F + +++ A R
Sbjct: 275 ITFNTMLDSCFKAGDLERVDKIWLEMKRR-NIEFSEVTYNILINGFSKSGKMEEARRFHG 333
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+M+ G + ++ LI C + D+A EML+ GI P ++ +AL + G
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFG 393
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 72/154 (46%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+ GL + + +I + + A++++D+M +R P + +Y +L+ G + L
Sbjct: 579 RVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLE 638
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ EMK G P+V+++ +++ C A DEA +ME P+ + + LI
Sbjct: 639 QAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILI 698
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+ + E ++ + + + EP+ T+ A+
Sbjct: 699 SKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRAL 732
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ + N L+ +CK+ +++ A KM++ P+ SYTIL+
Sbjct: 647 MKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDK 706
Query: 61 LLSMNEVYREMKDDGFEPD 79
+ ++Y+EM D EPD
Sbjct: 707 WEEVVKLYKEMLDKEIEPD 725
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 150/289 (51%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + F LID LCK+ + A+E+FD+M R ++P+I + T L+ G+ + N
Sbjct: 246 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 305
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ + + GF+ DV +Y + I+ +C R +AV +F EM P+ + +
Sbjct: 306 VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNS 365
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L +S A + + G P+ T ++ C S R++ A + +++ + G
Sbjct: 366 LIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y I++H + R EA ++ + M K P + TY ++ C + ++ A
Sbjct: 426 LTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLK-NLVPHIVTYSCLIDGLCRSGRISNA 484
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
R+ +EM +G LP YS L+++L + LD+A F +M+ G+ P
Sbjct: 485 WRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEP 533
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 146/301 (48%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + L+ C +V+ A+E+FD + + F D+ +Y + + G+ + +
Sbjct: 285 GYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDA 344
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ EM +G P++V+Y +I+ C A A E+ + M + P C L++G
Sbjct: 345 VRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDG 404
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L KRL +A+ F Q + G P+ +Y ++ C S R+ +A ++ +M + P+
Sbjct: 405 LCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPH 464
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L ++GR A+ + M K G P TY I++ +D A+ ++
Sbjct: 465 IVTYSCLIDGLCRSGRISNAWRLLNEMHVK-GPLPDTITYSILLDALWKKQHLDEAVFLF 523
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++M RG+ P + Y+ +I+ C +++D+A F+EM + P ++ L A+
Sbjct: 524 NQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKS 583
Query: 305 G 305
G
Sbjct: 584 G 584
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 163/354 (46%), Gaps = 37/354 (10%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVF---------------------------- 33
D F +K + ++ +ID LC++ V+ E +
Sbjct: 177 DGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKF 236
Query: 34 -------DKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
D+M +R D + +T+L++G + L+ E++ EM + G+EP++V+ +
Sbjct: 237 LEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTAL 296
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
+ +C D A ELF + K + I+G R+ +A++ F + + G
Sbjct: 297 MGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGV 356
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P TYN+++ C + ++ A+ ++ M + G+ P+ T I+L L K+ R ++A
Sbjct: 357 VPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAIL 416
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+F ++ + G P V +Y I++ C + ++ AM + +M + ++P + YS LI+ L
Sbjct: 417 LFNQLV-ESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGL 475
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
C ++ +A + EM G P +S L AL + + ++E + Q I +
Sbjct: 476 CRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKR 529
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 135/330 (40%), Gaps = 44/330 (13%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW------G 56
K G + N ++ LC + V +A E D++ F + SY IL+ G
Sbjct: 100 KRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVN 159
Query: 57 QQKNLLSM-------------------------------------NEVYREMKDDGFEPD 79
+ NLL M E Y EM +G P+
Sbjct: 160 EAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPN 219
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
+YG +I C ++ E L EM S ++F LI+GL L EA + F
Sbjct: 220 EFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFD 279
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ RG+EP T A++G YC ++ A + D + + G + TY++ +H K G
Sbjct: 280 EMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVG 339
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
R +A VF M R+ G P + TY ++ C +V A I M G+ P +
Sbjct: 340 RVRDAVRVFDEMCRE-GVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTC 398
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRP 289
L++ LC +LD A F ++++ G+ P
Sbjct: 399 CILLDGLCKSKRLDQAILLFNQLVESGLTP 428
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 140/308 (45%), Gaps = 9/308 (2%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
HV + +F K+ KR + D + +L+G +L E + E+ ++GF + VSYG
Sbjct: 87 HVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYG 146
Query: 85 IMINAHCSAKRYDEAVELFREM--------EATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
I+IN C R +EAV L R + + K + ++ +I+ L + E +
Sbjct: 147 ILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFE 206
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
F+ + G P TY +++ C + + + ++DEM + G+ + + +++ L
Sbjct: 207 FYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLC 266
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K G EA +F M + G EP + T ++ +C VDMA ++D + G +
Sbjct: 267 KNGMLVEAREMFDEMVNR-GYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDV 325
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
Y+ I+ C ++ DA + F EM G+ P +++L L G A + +
Sbjct: 326 WTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKT 385
Query: 317 IDKLRKTP 324
+ + TP
Sbjct: 386 MHRSGLTP 393
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 160/330 (48%), Gaps = 11/330 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + L++ L K+ V A+E+F +M+ + PD+ SY L++G+ + N+
Sbjct: 590 GILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKA 649
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ EM G +V+ Y +++ C + ++A EL EM P+ +CT+I+G
Sbjct: 650 SSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDG 709
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD--EMRKCGIG 182
L+EA Q F + K +G P++ Y +V C R+ND R + E + G
Sbjct: 710 YCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCC---RLNDVERAITIFETNEKGCA 766
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRM---SRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
++ ++ +++ + K G+TE + R+ S +P TY I++ C ++
Sbjct: 767 SSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEA 826
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A ++ M+ ++P + Y++L+N + + F E++ GI P ++S +
Sbjct: 827 AKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIIN 886
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
A EGM A+VL +D++ VD G
Sbjct: 887 AFLKEGMTTKALVL---LDQMFAKNAVDDG 913
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 133/287 (46%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FG+ + LI+ + ++V + E+ ++KKR +Y ++G +
Sbjct: 376 MITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGD 435
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +EM G P+VV Y +I R+ +AV + +EM P + +
Sbjct: 436 LDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNS 495
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL K++ EA F + + GF+P+A TY A + Y + A + + EM +CG
Sbjct: 496 LIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECG 555
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN +++ K G+ EA S F+ M + G TY +++ N +V+ A
Sbjct: 556 VIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQ-GILGDAKTYTVLMNGLVKNGKVNDA 614
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
I+ EM+ +G+ P + Y TLI+ + A F EM+ G+
Sbjct: 615 EEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 134/273 (49%), Gaps = 4/273 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD +N LI L K++ ++ A+ +M + F PD +Y + G+ + S ++
Sbjct: 488 PDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKY 547
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+EM + G P+ V +IN +C + EA FR M + L+NGL
Sbjct: 548 VKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVK 607
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
++++A + F + + +G P+ +Y ++ + + A + DEM + G+ N
Sbjct: 608 NGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVII 667
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y+++L ++G E+A + MS K G P TY ++ +C + + A +++DEM
Sbjct: 668 YNMLLGGFCRSGEIEKAKELLDEMSGK-GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEM 726
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
K +G++P +Y+TL++ C + ++ A F+
Sbjct: 727 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE 759
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 141/336 (41%), Gaps = 36/336 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +N LID LCK + +E A+ + +M D +Y+IL++G + +N +
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334
Query: 65 NEVYREMKDDGFEPD--------------------------VVSYGIMINAHCSA----- 93
N + EM GF D ++++G+ A A
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394
Query: 94 ----KRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
K + EL E++ N SP+ + T + G+ S L A + G P
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
Y ++ + R DA R++ EMR+ GI P+T Y+ ++ L KA + +EA S
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M G +P TY + + + A + EM GV+P + + LIN C +
Sbjct: 515 EMVEN-GFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKK 573
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
K+ +AC F+ M++ GI + ++ L L G
Sbjct: 574 GKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNG 609
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 1/265 (0%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
+V+ A E+ M + P +SY +L++G +QK L + EM G D V+Y
Sbjct: 260 NVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYS 319
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
I+I+ + D A L EM + P ++ I + E + +A F
Sbjct: 320 ILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITF 379
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P A Y +++ + + Y ++ E++K I + TY + + +G + A
Sbjct: 380 GVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGA 439
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
Y++ K M G P V Y +++ F ++ A+R+ EM+ +G+ P Y++LI
Sbjct: 440 YNIVKEMG-ASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLII 498
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRP 289
L K+D+A + EM++ G +P
Sbjct: 499 GLSKAKKMDEARSFLLEMVENGFKP 523
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 8/258 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + +N L+ C+S +E+A+E+ D+M + F P+ +Y +++G+ + +
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ EMK G PD Y +++ C + A+ +F E C S F
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNA 774
Query: 121 LIN---GLGSEKRLSEALQFF--GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
LIN G + ++ + G K G +P TYN ++ C + A +
Sbjct: 775 LINWVFKFGKTELTTDMINRLMDGSFDKFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHH 833
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M+K + P TY +L+ K GR E +SVF + G EP Y +++ F
Sbjct: 834 MQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVI-AAGIEPDNIMYSVIINAFLKEG 892
Query: 236 QVDMAMRIWDEMKARGVL 253
A+ + D+M A+ +
Sbjct: 893 MTTKALVLLDQMFAKNAV 910
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 139/364 (38%), Gaps = 58/364 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFD--PDIKSYTILLEGWGQQKNLLSMNEVYRE 70
F LID + ++ A VF K D P + LL+ ++ L +VY+
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214
Query: 71 MKDDGFEPDVVSYGIMINAHC---------------------SAKRYDEAVELFREMEAT 109
M + DV SY ++I AHC + DEA+EL + M
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCK 274
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
PS + LI+GL +KRL +A + G + Y+ ++ + A
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM---SRKPGTEPTVS---- 222
++ EM G + YD + + K G E+A ++F M PG S
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394
Query: 223 ---------------------------TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
TY V+ C + +D A I EM A G P
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLA 314
+ +Y+TLI + + + DA + +EM + GI P +++L L + + M+E L
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLL 514
Query: 315 QKID 318
+ ++
Sbjct: 515 EMVE 518
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 108/297 (36%), Gaps = 67/297 (22%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+Q+L F+ L LC +E+A V +M +R++ + E W S+
Sbjct: 94 EQKLDSFSFLALDLCNFGSIEKAHSVVIRMIERKWP--------VAEVWS------SIVR 139
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF-CT-LING 124
RE + V+ +GI+I+ + DEAV +F + + P + C L++
Sbjct: 140 CLREFVGKS-DDRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDA 198
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL + +R + +Y ++GA+C
Sbjct: 199 LLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHC----------------------- 235
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ G + A V + + GT VD A+ +
Sbjct: 236 ------------RDGNVQLAKDVLLKTEEELGTATL---------------NVDEALELK 268
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M +G++P Y+ LI+ LC + +L+DA EM +G+ +S L L
Sbjct: 269 KSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGL 325
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 155/298 (52%), Gaps = 2/298 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++G + ++ +LC+ + E F +M + P++ +YT ++G +++
Sbjct: 199 MWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRY 258
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
+ V EM G +P+V ++ +I+ C + A LF ++ ++++ KP+ H +
Sbjct: 259 VKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 318
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I G E +L+ A + ++G +P TY ++G +C + A+ +M++M++
Sbjct: 319 VMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQE 378
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN TY+ V+ K G+ +EAY V RM+ G + TY I++ C +
Sbjct: 379 GFLPNIYTYNAVIDGFCKKGKIQEAYKVL-RMATSQGLKFDKITYTILITEHCKQGHITY 437
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A+ ++D M G P + Y++LI++ C + +++++ K+F + L IG+ P Q ++++
Sbjct: 438 ALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSM 495
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 149/324 (45%), Gaps = 12/324 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-----W 55
M + G + ++ ID LCK R+V++A V ++M R P++ ++T L++G W
Sbjct: 234 MLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGW 293
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
++ L + + K ++P+V +Y +MI +C + A L M KP+
Sbjct: 294 TERAFRLFLKLI----KSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 349
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ + TLI G A + + K+ GF P TYNAV+ +C +I +AY+++
Sbjct: 350 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 409
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
G+ + TY I++ K G A +F RM G P + Y ++ +C
Sbjct: 410 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN-GCCPDIEAYTSLISTYCQQR 468
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF- 294
Q++ + + +D+ G+LP Y+++I C + A + F+ M+ G L
Sbjct: 469 QMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSILMC 528
Query: 295 -SNLKQALRDEGMEETAVVLAQKI 317
+N+ A R + E + A ++
Sbjct: 529 SNNVVSATRHSPLHEAHGLGANRM 552
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 7/268 (2%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+V+ M G PD S+ ++ C + +E L M ++ L
Sbjct: 159 KVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSL 218
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ R + +FF + + G P Y A + C + A+ +++EM G+ PN
Sbjct: 219 CEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNV 278
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T+ ++ L K G TE A+ +F ++ + +P V TY +++ +C ++ A +
Sbjct: 279 YTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLV 338
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M +G+ P + Y+TLI C D A + +M G P ++ + +G
Sbjct: 339 RMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKG 398
Query: 306 -MEETAVVL------AQKIDKLRKTPLV 326
++E VL K DK+ T L+
Sbjct: 399 KIQEAYKVLRMATSQGLKFDKITYTILI 426
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 2/248 (0%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
++ +G+ L ++ EM+ G V + ++ + A ++F M
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
P F L+ E ++ E + GF + T VV + C R D
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
M + G PN Y + L K ++A+ V + M + G +P V T+ ++
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR-GLKPNVYTHTTLIDG 287
Query: 231 FCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C + A R++ ++ K+ P +H Y+ +I C E KL A M++ G++P
Sbjct: 288 LCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKP 347
Query: 290 PGQLFSNL 297
++ L
Sbjct: 348 NTNTYTTL 355
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 55/358 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G L FN L+ LC V A ++F +M K P++ ++T L+ G ++
Sbjct: 41 LTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGR 96
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFC 119
++ + M +DG +P+ ++YG +++ C A+ L R+ME ++ KP I+
Sbjct: 97 VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYS 156
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR-------------- 165
+I+GL + R ++A F + + +G P+ TY+ ++ +C S +
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR 216
Query: 166 ---------------------INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
+N A ++ EM G+ PN T + +L L +G+ ++A
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276
Query: 205 YSVFKRMSRK----------PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+FK M + G EP V TY I++ + A +++EM RG++P
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-----KQALRDEGME 307
YS++IN LC + +LD+A + F M P F+ L K + D+G+E
Sbjct: 337 DTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 143/313 (45%), Gaps = 13/313 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLS 63
GL+ + ++D +CK A + KM++ PD+ Y+ +++G +
Sbjct: 111 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTD 170
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM+D G PD+V+Y MIN CS+ ++ EA L +EM P F LIN
Sbjct: 171 AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLIN 230
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC---- 179
L E L+ A + G P T N ++ C S ++ DA M M+K
Sbjct: 231 ALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDI 290
Query: 180 -------GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
G+ P+ +TY+I++ LI G+ EA +++ M + G P TY ++ C
Sbjct: 291 DATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTVTYSSMINGLC 349
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+++D A +++D M ++ P + ++TLI C +DD + F EM GI
Sbjct: 350 KQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAI 409
Query: 293 LFSNLKQALRDEG 305
+ L + R G
Sbjct: 410 TYITLIRGFRKVG 422
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 12/280 (4%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
DI S+ IL++ + L + ++ GF P +V++ +++ C R EA++LF
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
+M CKP+ F TL+NGL E R+ EA+ + + G +P TY +V C
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC-- 127
Query: 164 MRINDAYRMMDEMRK----CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
++ D ++ +RK I P+ Y ++ L K GR +A ++F M K G P
Sbjct: 128 -KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK-GIFP 185
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
+ TY ++ FC + + A R+ EM R + P + +S LIN+L E L+ A
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
QEM+ G+ P + L L D G + A+ + + + K
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQK 285
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 141/289 (48%), Gaps = 12/289 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ +I+ C S AQ + +M R+ PD+ +++ L+ ++ +L S
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSA 241
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-----------NCKP 113
++ +EM G P+VV+ +++ C + + +A+E+F+ M+ + +P
Sbjct: 242 QDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEP 301
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ LI+GL +E + EA + + + RG P+ TY++++ C R+++A +M
Sbjct: 302 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMF 361
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
D M PN T++ ++ KAG ++ +F M R+ G TY ++R F
Sbjct: 362 DSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR-GIVANAITYITLIRGFRK 420
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ ++ I+ EM + GV P ++ L +++L A +E+
Sbjct: 421 VGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N LI L A+E++++M R PD +Y+ ++ G +Q L
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M F P++V++ +I +C A D+ +ELF EM + + TLI G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
++ +L F + G P+ T ++ + A M++E++
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+++I++ + A S F +++ K G PT+ T+ ++ C +V A+ ++ +
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLT-KLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQ 75
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M V+ ++TL+N LC E ++ +A M++ G++P + + + G
Sbjct: 76 MCKPNVVT----FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131
Query: 307 EETAVVLAQKIDKL 320
+A+ L +K+++L
Sbjct: 132 TVSALNLLRKMEEL 145
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 158/331 (47%), Gaps = 13/331 (3%)
Query: 1 MDKF-GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M+ F G + + +F L+DTLCK ++ + A EVF+K +K +++P+ K YTIL+ GW +
Sbjct: 174 MEAFLGREPDAQEFTTLLDTLCKYKYPKVAVEVFNK-RKYKYEPNEKMYTILIYGWCKVN 232
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSA------KRYDEAVE----LFREMEAT 109
+ ++M D G EP++V+Y I++N C R+D V L +EM
Sbjct: 233 RSDMAQKFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDR 292
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+P + +++ + L F K RG P TY +V+ R+ DA
Sbjct: 293 GIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 352
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK-PGTEPTVSTYEIVV 228
++ EM G+ P+ TY+ A ++ +M T P + +Y I++
Sbjct: 353 ESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILL 412
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
MF + + M +W++M R V P + Y+ L++ C ++K +AC++F EM++ G
Sbjct: 413 GMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFL 472
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
P F + L M T L +++D+
Sbjct: 473 PQKITFETPYRGLIQADMLRTWRRLKKRVDE 503
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P A Y+AVV A + + + A+R++ E G RT+ ++ + AG T +A
Sbjct: 112 PNADAYDAVVDALGRAHQFDAAWRLVVEAAADGAA-TPRTFAVLARRYVAAGLTRQAVRA 170
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
F M G EP + ++ C +A+ ++++ K + P MY+ LI C
Sbjct: 171 FDDMEAFLGREPDAQEFTTLLDTLCKYKYPKVAVEVFNKRKYK-YEPNEKMYTILIYGWC 229
Query: 268 HEDKLDDACKYFQEMLDIGIRP 289
++ D A K+ ++M+D GI P
Sbjct: 230 KVNRSDMAQKFLKDMIDHGIEP 251
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 144/275 (52%), Gaps = 2/275 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+LI +++E+A V + ++ +PD+ +Y ++ G+ + + + +V MK
Sbjct: 108 KLIKGFFNFKNIEKASRVMEILESHT-EPDVFAYNAVISGFCKVNRIEAATQVLNRMKAR 166
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
GF PD+V+Y IMI + C+ ++ A+++ ++ NC P+ + LI E ++EA
Sbjct: 167 GFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 226
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
++ + RG P+ TYNA++ C ++ +++ EM G PN TY I++
Sbjct: 227 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISS 286
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L + GR +EA SV K M K T P +Y+ ++ C ++D+A+ I D M + G LP
Sbjct: 287 LCRFGRIDEAISVLKVMIEKELT-PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLP 345
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+T++ +LC + A + F ++ +G P
Sbjct: 346 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 380
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 118/242 (48%), Gaps = 1/242 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I CK +E A +V ++MK R F PDI +Y I++ ++ L +V ++
Sbjct: 140 YNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLL 199
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D P V++Y I+I A +EA++L EM A P + + +I G+ E
Sbjct: 200 LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWD 259
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + + RG EP TY+ ++ + C RI++A ++ M + + P+T +YD ++
Sbjct: 260 EGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLI 319
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR + A + M G P + Y ++ C N + A+ I+++++ G
Sbjct: 320 SALCKEGRLDLAIGIMDYMISN-GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGC 378
Query: 253 LP 254
P
Sbjct: 379 PP 380
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 142/310 (45%), Gaps = 2/310 (0%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
+L++ CK+ + + + + + PD+ T L++G+ KN+ + V E+ +
Sbjct: 73 KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILES 131
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
EPDV +Y +I+ C R + A ++ M+A P + +I L + ++L A
Sbjct: 132 HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 191
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L+ Q P TY ++ A IN+A ++++EM G+ P+ TY+ ++
Sbjct: 192 LKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 251
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+ K G +E + M + G EP TY I++ C ++D A+ + M + + P
Sbjct: 252 MCKEGMWDEGEKLVAEMFSR-GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP 310
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ Y LI++LC E +LD A M+ G P ++ + AL G A+ +
Sbjct: 311 DTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 370
Query: 315 QKIDKLRKTP 324
K+ + P
Sbjct: 371 NKLRGMGCPP 380
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N +I +LC R + A +V D++ P + +YTIL+E +
Sbjct: 163 MKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGG 222
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G PD+ +Y +I C +DE +L EM + C+P+ +
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSI 282
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ EA+ ++ P+ +Y+ ++ A C R++ A +MD M G
Sbjct: 283 LISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 342
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
P+ Y+ +L L K G +A +F ++ R G P
Sbjct: 343 CLPDIVNYNTILAALCKNGNANQALEIFNKL-RGMGCPPN 381
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 162/358 (45%), Gaps = 55/358 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G L FN L+ LC V A ++F +M K P++ ++T L+ G ++
Sbjct: 41 LTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGR 96
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFC 119
++ + M +DG +P+ ++YG +++ C A+ L R+ME ++ KP I+
Sbjct: 97 VVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYS 156
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR-------------- 165
+I+GL + R ++A F + + +G P+ TY+ ++ +C S +
Sbjct: 157 AIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVR 216
Query: 166 ---------------------INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
+N A ++ EM G+ PN T + +L L +G+ ++A
Sbjct: 217 KISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276
Query: 205 YSVFKRMSRK----------PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+FK M + G EP V TY I++ + A +++EM RG++P
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-----KQALRDEGME 307
YS++IN LC + +LD+A + F M P F+ L K + D+G+E
Sbjct: 337 DTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLE 394
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 143/313 (45%), Gaps = 13/313 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLS 63
GL+ + ++D +CK A + KM++ PD+ Y+ +++G +
Sbjct: 111 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTD 170
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM+D G PD+V+Y MIN CS+ ++ EA L +EM P F LIN
Sbjct: 171 AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLIN 230
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC---- 179
L E L+ A + G P T N ++ C S ++ DA M M+K
Sbjct: 231 ALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDI 290
Query: 180 -------GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
G+ P+ +TY+I++ LI G+ EA +++ M + G P TY ++ C
Sbjct: 291 DATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTVTYSSMINGLC 349
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+++D A +++D M ++ P + ++TLI C +DD + F EM GI
Sbjct: 350 KQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAI 409
Query: 293 LFSNLKQALRDEG 305
+ L + R G
Sbjct: 410 TYITLIRGFRKVG 422
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 135/280 (48%), Gaps = 12/280 (4%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
DI S+ IL++ + L + ++ GF P +V++ +++ C R EA++LF
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
+M CKP+ F TL+NGL E R+ EA+ + + G +P TY +V C
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC-- 127
Query: 164 MRINDAYRMMDEMRK----CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
++ D ++ +RK I P+ Y ++ L K GR +A ++F M K G P
Sbjct: 128 -KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK-GIFP 185
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
+ TY ++ FC + + A R+ EM R + P + +S LIN+L E L+ A
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
QEM+ G+ P + L L D G + A+ + + + K
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQK 285
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 141/289 (48%), Gaps = 12/289 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ +I+ C S AQ + +M R+ PD+ +++ L+ ++ +L S
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSA 241
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-----------NCKP 113
++ +EM G P+VV+ +++ C + + +A+E+F+ M+ + +P
Sbjct: 242 QDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEP 301
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ LI+GL +E + EA + + + RG P+ TY++++ C R+++A +M
Sbjct: 302 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMF 361
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
D M PN T++ ++ KAG ++ +F M R+ G TY ++R F
Sbjct: 362 DSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR-GIVANAITYITLIRGFRK 420
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ ++ I+ EM + GV P ++ L +++L A +E+
Sbjct: 421 VGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N LI L A+E++++M R PD +Y+ ++ G +Q L
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M F P++V++ +I +C A D+ +ELF EM + + TLI G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
++ +L F + G P+ T ++ + A M++E++
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+++I++ + A S F +++ K G PT+ T+ ++ C +V A+ ++ +
Sbjct: 17 SFNILIKCFCSCSKLPFALSTFGKLT-KLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQ 75
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M V+ ++TL+N LC E ++ +A M++ G++P + + + G
Sbjct: 76 MCKPNVVT----FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGD 131
Query: 307 EETAVVLAQKIDKL 320
+A+ L +K+++L
Sbjct: 132 TVSALNLLRKMEEL 145
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 145/305 (47%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + +N L++ L S +E A+++ D MK+ + ++ +YT L++ +
Sbjct: 44 MKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGR 103
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++++EMKD G P+ +Y +I + + EA+EL+ EM+ C H +
Sbjct: 104 LQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNI 163
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I G L + + + +G P+ TYN ++ Y A+ ++ EM + G
Sbjct: 164 AIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAG 223
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY+I+L K EA +F+ + K G P + TY ++ ++ + A
Sbjct: 224 YRPNIWTYNIMLSSARKEQSVAEATQLFENLKSK-GVVPNIVTYSAMLSLYGRHGLYTEA 282
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++WDEM G +P + YS LI S H +A FQ+M GI P ++++ L A
Sbjct: 283 AKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDA 342
Query: 301 LRDEG 305
G
Sbjct: 343 YGKAG 347
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 140/299 (46%), Gaps = 1/299 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
++ A + + MK+ PD Y L+ G L + ++ +MK D ++V+Y
Sbjct: 34 LDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTN 93
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I + +A R + +LF+EM+ P+ + LI G G + EAL+ + + G
Sbjct: 94 LIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVG 153
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+ TYN + Y + D R++DEM G+ P+ TY+ +L K +A+
Sbjct: 154 CAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAH 213
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ + M+ + G P + TY I++ V A ++++ +K++GV+P + YS +++
Sbjct: 214 EILREMT-EAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSL 272
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+A K + EM++ G P +S L ++ GM + A+ Q + K P
Sbjct: 273 YGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVP 331
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G+ + +N L+D K + +A E+ +M + + P+I +Y I+L ++++
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQS 243
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +K G P++V+Y M++ + Y EA +L+ EM C P +
Sbjct: 244 VAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSG 303
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G EAL F +K G P+ Y A++ AY + R +A + EM K G
Sbjct: 304 LIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEG 363
Query: 181 IGPNTRTYDIVLHHLIKAGR 200
P+ TY I++ AGR
Sbjct: 364 FVPDGITYGILVRAFANAGR 383
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 1/231 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G +++ +N I K +E + + D+M + PD +Y LL+ + ++
Sbjct: 149 MDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSY 208
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E+ REM + G+ P++ +Y IM+++ + EA +LF +++ P+ +
Sbjct: 209 FVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSA 268
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ G +EA + + + + G P Y+ ++ +Y +A +MRK G
Sbjct: 269 MLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSG 328
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
I P+T+ Y ++ KAGR EA ++ M+ K G P TY I+VR F
Sbjct: 329 IVPDTKIYTALMDAYGKAGRCREAELLYFEMT-KEGFVPDGITYGILVRAF 378
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 3/238 (1%)
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAK-RYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
YR MKD G E VV+Y ++I+ + K + D A+ L M+ + KP ++ L+NGL
Sbjct: 6 YRMMKD-GCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLV 64
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ RL A + K+ TY ++ Y + R+ D ++ EM+ G PN+
Sbjct: 65 NSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSW 124
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ ++ + G +EA ++ M G V TY I + M+ ++ R+ DE
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMD-GVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDE 183
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M +GV P Y+TL++ + A + +EM + G RP ++ + + R E
Sbjct: 184 MDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKE 241
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 83/166 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +N ++ + K + V A ++F+ +K + P+I +Y+ +L +G+
Sbjct: 219 MTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGL 278
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ EM + G P +++Y +I ++ Y EA+ F++M + P I+
Sbjct: 279 YTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTA 338
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
L++ G R EA + + K GF P+ TY +V A+ + R+
Sbjct: 339 LMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFC-YNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
A S+F RM K G E TV TY +++ + +++D A+R+ + MK G P +Y+ L
Sbjct: 1 ACSLFYRM-MKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCL 59
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
+N L + +L+ A K +M + ++NL + + G + L Q++ +
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGE 119
Query: 323 TP 324
+P
Sbjct: 120 SP 121
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 151/305 (49%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + + L++ C + + A + D+M + + PD ++T L+ G
Sbjct: 70 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 129
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G +P++V+YG+++N C D A L +MEA + IF T
Sbjct: 130 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 189
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L + + +AL F + + +G P TY++++ C R +DA +++ +M +
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 249
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T++ ++ +K G+ EA + M ++ +P + TY ++ FC + ++D A
Sbjct: 250 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS-IDPDIFTYNSLINGFCMHDRLDKA 308
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++ M ++ P + Y+TLI C +++D + F+EM G+ ++ L Q
Sbjct: 309 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368
Query: 301 LRDEG 305
L +G
Sbjct: 369 LFHDG 373
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 157/311 (50%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + F LI L A + D+M +R P++ +Y +++ G ++ +
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 164
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M+ E DVV + +I++ C + D+A+ LF+EME +P+ + +
Sbjct: 165 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 224
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L S R S+A Q ++ P T+NA++ A+ + +A ++ D+M K
Sbjct: 225 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 284
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ +++ R ++A +F+ M K P + TY +++ FC + +V+
Sbjct: 285 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD-CFPDLDTYNTLIKGFCKSKRVEDG 343
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ EM RG++ Y+TLI L H+ D+A K F++M+ G+ P +S L
Sbjct: 344 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 403
Query: 301 LRDEGMEETAV 311
L + G E A+
Sbjct: 404 LCNNGKLEKAL 414
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 142/278 (51%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L + +++ LCK ++ A + +KM+ + + D+ + +++ + +++
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 203
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G P+VV+Y +I+ CS R+ +A +L +M P+ F LI+
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 263
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + EA + KR +P+ TYN+++ +C R++ A +M + M P+
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ K+ R E+ +F+ MS + TV TY +++ ++ D A +++
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV-TYTTLIQGLFHDGDCDNAQKVF 382
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+M + GV P + YS L++ LC+ KL+ A + F M
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 148/304 (48%), Gaps = 2/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + ++ LI LC A ++ M +++ +P++ ++ L++ + ++
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 269
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +M +PD+ +Y +IN C R D+A ++F M + +C P + T
Sbjct: 270 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 329
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ + + F + RG + TY ++ ++A ++ +M G
Sbjct: 330 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 389
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G+ E+A VF M +K + + Y ++ C +VD
Sbjct: 390 VPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDG 448
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+T+I+ LC + L +A ++M + G P ++ L +A
Sbjct: 449 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 508
Query: 301 -LRD 303
LRD
Sbjct: 509 HLRD 512
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 38/313 (12%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK--NLLSMNEVYREMKDDGFEPD 79
K ++ A +F M K R P I + LL + K +L+ + +M G+EP
Sbjct: 19 KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
+V+ ++N +C KR +AV L +M +P F TLI+GL + SEA+
Sbjct: 79 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ +RG +P TY VV C I+ A+ ++++M I + ++ ++ L K
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC--------------------------Y 233
++A ++FK M K G P V TY ++ C +
Sbjct: 199 HVDDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 257
Query: 234 NAQVDM---------AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
NA +D A ++ D+M R + P + Y++LIN C D+LD A + F+ M+
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317
Query: 285 IGIRPPGQLFSNL 297
P ++ L
Sbjct: 318 KDCFPDLDTYNTL 330
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 108/203 (53%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L +N LI CKS+ VE E+F +M R D +YT L++G + + +V+
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
++M DG PD+++Y I+++ C+ + ++A+E+F M+ + K +I+ T+I G+
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ + F +G +P TYN ++ C + +AY ++ +M++ G P++ TY
Sbjct: 443 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 502
Query: 189 DIVLHHLIKAGRTEEAYSVFKRM 211
+ ++ ++ G + + + M
Sbjct: 503 NTLIRAHLRDGDKAASAELIREM 525
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV--FKRMSRKPGTEPTV 221
++++DA + M K P+ ++ +L + K + + S+ +M K G EP++
Sbjct: 21 LKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKM-MKLGYEPSI 79
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
T ++ +C+ ++ A+ + D+M G P ++TLI+ L +K +A
Sbjct: 80 VTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR 139
Query: 282 MLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
M+ G +P + + L G + A L K++
Sbjct: 140 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 176
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + +N +I LC R ++ A + KMK+ PD +Y L+ + + +
Sbjct: 459 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 518
Query: 65 NEVYREMKDDGFEPDVVSYGIMIN 88
E+ REM+ F D + G++ N
Sbjct: 519 AELIREMRSCRFVGDASTIGLVAN 542
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 15/291 (5%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L +L +N LI + + A +F +++ + P + +Y L++G + NL
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNL---- 398
Query: 66 EVYREMKDD----GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
++ + MKDD G PDVV++ I++ C A ELF EM + KP + T
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTR 458
Query: 122 INGLGSEKRLSEALQFFG---QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
I G E +L + FG + K GF P+ TYN ++ C +DA ++ +MR
Sbjct: 459 IVG---ELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRL 515
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
GI P+ TY ++H + +G +A VF M +K G P+V TY +++ + ++D
Sbjct: 516 EGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKK-GIHPSVVTYTVLIHSYAVRGRLD 574
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A + +DEM+ +GV P + Y+ LI LC E+ +D A F EM G+ P
Sbjct: 575 FAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSP 625
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID C++ +++ A+ + D M K PD+ ++TIL+ G+ Q NL E++ EM
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEML 444
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD ++Y I +A + EM+A P + LINGL
Sbjct: 445 SRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD 504
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + + G P+ TY +++ A+ S + A + +M K GI P+ TY +++
Sbjct: 505 DANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLI 564
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H GR + A F M K G P V TY ++ C +D+A ++ EM+++GV
Sbjct: 565 HSYAVRGRLDFAKKYFDEMQDK-GVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGV 623
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + Y+ LIN + DA K +++MLD I+P S L + L
Sbjct: 624 SPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHL 672
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 1/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ +LC+ V A+ D M PD+ SY L+ G+ + N ++ E++
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P VV+Y +I+ C D A + +M P F L+ G L
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLP 434
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + RG +P+ Y + + A+ M +EM+ G P+ TY++++
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L K G ++A + ++M R G P TY ++ + + A ++ +M +G+
Sbjct: 495 NGLCKLGNFDDANELVQKM-RLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGI 553
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ LI+S +LD A KYF EM D G+ P ++ L L E M + A
Sbjct: 554 HPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYN 613
Query: 313 LAQKIDKLRKTP 324
L +++ +P
Sbjct: 614 LFAEMESKGVSP 625
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ + NR++ L V +EV+ M K + P I ++ +++ ++ +
Sbjct: 167 GLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRA 226
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV M+ G +P+ VSY +++N +D A EL +M K S H + LI G
Sbjct: 227 VEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRG 286
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ EA + RG P TYN ++ + C R++DA R +D M + P+
Sbjct: 287 FCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPD 346
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ +++ + G EA +F + R P+V TY ++ C +D+A +
Sbjct: 347 LVSYNTLIYGYSRLGNFAEALLLFSEL-RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMK 405
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D+M G+ P + ++ L+ C L A + F EML G++P
Sbjct: 406 DDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKP 450
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 145/346 (41%), Gaps = 38/346 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWG---- 56
M K ++ + FN ++D+ CK V RA EV D M+ DP+ SY +L+ G
Sbjct: 198 MIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGE 257
Query: 57 --------QQKNLLSM-----------------------NEVYREMKDDGFEPDVVSYGI 85
+Q ++L + N++ REM G P VV+Y
Sbjct: 258 FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNT 317
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++ + C R +A M + P + TLI G +EAL F + + +
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P TYN ++ C + ++ A M D+M K G+ P+ T+ I++ + G A
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAK 437
Query: 206 SVFKRM-SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+F M SR + T IV + N M+ +EMKA G P + Y+ LIN
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMK--EEMKAEGFPPDLITYNVLIN 495
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
LC DDA + Q+M GI P ++++ A G+ A
Sbjct: 496 GLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKA 541
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 41/249 (16%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG---WGQ 57
M K GL ++ F L+ C+ ++ A+E+FD+M R PD +YT + G G
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGN 467
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL--------------- 102
M E EMK +GF PD+++Y ++IN C +D+A EL
Sbjct: 468 PSKAFGMKE---EMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVT 524
Query: 103 --------------------FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
F +M PS + LI+ RL A ++F + +
Sbjct: 525 YTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQ 584
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+G P TYNA++ C ++ AY + EM G+ PN TY I+++ +
Sbjct: 585 DKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQ 644
Query: 203 EAYSVFKRM 211
+A ++K M
Sbjct: 645 DALKLYKDM 653
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 9/203 (4%)
Query: 4 FGLKQEL------PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
FG+K+E+ PD +N LI+ LCK + + A E+ KM+ PD +YT ++
Sbjct: 472 FGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHA 531
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
L EV+ +M G P VV+Y ++I+++ R D A + F EM+ P+
Sbjct: 532 HLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ LI GL E + A F + + +G P TY ++ DA ++
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYK 651
Query: 175 EMRKCGIGPNTRTYDIVLHHLIK 197
+M I P++ T+ ++ HL K
Sbjct: 652 DMLDREIKPDSCTHSALMKHLSK 674
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 108/237 (45%), Gaps = 21/237 (8%)
Query: 70 EMKDDGFEPDV-VSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFCTLING--- 124
E+K DG DV V G N+ S K D +++F +++ C +F ++N
Sbjct: 113 EVKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCL---MVFYKMVNNGLL 169
Query: 125 ------------LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
L + ++E + + K P T+N ++ + C + A +
Sbjct: 170 PDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEV 229
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+D MR G PN +Y+++++ L G + A + ++MS G + + TY ++R FC
Sbjct: 230 LDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSML-GLKVSAHTYNPLIRGFC 288
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ A + EM RG LP + Y+T++ SLC ++ DA +Y M++ + P
Sbjct: 289 KKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMP 345
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 68/137 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + + LI + ++ A++ FD+M+ + P++ +Y L+ G ++
Sbjct: 548 MLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENM 607
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ G P+ +Y I+IN + + + + +A++L+++M KP
Sbjct: 608 MDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSA 667
Query: 121 LINGLGSEKRLSEALQF 137
L+ L + +L L+
Sbjct: 668 LMKHLSKDYKLLAVLRL 684
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 155/312 (49%), Gaps = 16/312 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-----W 55
M + GL + +F LI+ LCK +++A E+ ++M +R + P++ ++T L++G W
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
++ L + V + DG++P+V +Y MIN +C + + A L M+ P+
Sbjct: 345 TEKAFRLFLKLV----RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400
Query: 116 HIFCTLING---LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ + TLI+G +G+ R E + G K GF P TYNA++ C +++AYR+
Sbjct: 401 NTYTTLIDGHCKVGNFVRAYELMDLMG---KEGFSPNIYTYNAIIDGLCKKGSLDEAYRL 457
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
++++ G+ + TY I++ + T + F +M K G P + +Y ++ FC
Sbjct: 458 LNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM-LKVGFTPDIHSYTTLISTFC 516
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
Q+ + R+++E + G++P Y+++I C A K FQ M + G P
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576
Query: 293 LFSNLKQALRDE 304
+ L L E
Sbjct: 577 TYGALISGLCKE 588
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 10/287 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK + RA E+ D M K F P+I +Y +++G ++
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKG- 449
Query: 61 LLSMNEVYREMKD---DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
S++E YR + G + D V+Y I+++ HC + ++ F +M P H
Sbjct: 450 --SLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHS 507
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TLI+ +K++ E+ + F ++ G P TY +++ YC + A ++ M
Sbjct: 508 YTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMS 567
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G P++ TY ++ L K + ++A +++ M K G P T + +C
Sbjct: 568 NHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK-GLSPCEVTRLTLAYEYCKKDDS 626
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
A+ + D ++ R + ++ TL+ LC E KLD A +F ++LD
Sbjct: 627 STAINVLDRLEKRQWIRTVN---TLVRKLCSEGKLDMAALFFHKLLD 670
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 141/357 (39%), Gaps = 44/357 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL N ++D VE A+ +F +M +R PD S+ +++
Sbjct: 180 MQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR 239
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L M + GF D + ++I+A C + V F +M P+ F
Sbjct: 240 VLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTA 299
Query: 121 LINGLGSEKRLSEALQFFGQSKKR------------------------------------ 144
LINGL + + +A + + +R
Sbjct: 300 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSD 359
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G++P TY A++ YC ++N A ++ M++ G+ PNT TY ++ K G A
Sbjct: 360 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 419
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
Y + M K G P + TY ++ C +D A R+ +++ G+ Y+ L++
Sbjct: 420 YELMDLMG-KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-------KQALRDEGMEETAVVLA 314
C + + + +F +ML +G P ++ L KQ E + E AV L
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLG 535
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ EM G PD VS+ +M+ A C+ R EA M +I+
Sbjct: 211 MFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFC 270
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ ++ + +F + + G P + A++ C I A+ +++EM + G PN
Sbjct: 271 QKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVY 330
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T+ ++ L K G TE+A+ +F ++ R G +P V TY ++ +C +++ A +
Sbjct: 331 THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSR 390
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M+ +G++P + Y+TLI+ C A + M G P ++ + L +G
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS 450
Query: 307 EETAVVLAQKID 318
+ A L K+
Sbjct: 451 LDEAYRLLNKVS 462
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 2/229 (0%)
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM++ G P + +++ + A +F EM P F ++ +
Sbjct: 179 EMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMG 238
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R+ EA ++ +RGF + T ++ A+C +N +M + G+ PN +
Sbjct: 239 RVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-K 248
+++ L K G ++A+ + + M R+ G +P V T+ ++ C + A R++ ++ +
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRR-GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVR 357
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ G P +H Y+ +IN C EDKL+ A M + G+ P ++ L
Sbjct: 358 SDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ +A M+ EM+ G+ P+T+T + VL + G E A ++F M ++ G P ++
Sbjct: 169 KLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQR-GVSPDCVSF 227
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++V C +V A R + M RG + + +I++ C + ++ YF +M++
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+G+ P F+ L L +G + A L +++
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 147/302 (48%), Gaps = 9/302 (2%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
E+ FN L+D LCK V+ + + +M+ R PD ++ +L GW + ++ ++
Sbjct: 233 EINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAMKLL 291
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM---EATNCKPSPHIFCTLINGL 125
EM + G +P+ +Y I+ C A DEA +LF M + P+ F +I L
Sbjct: 292 EEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVAL 351
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ E + G+ G P+ TY V+ C + ++++AY+ +DEM G P+
Sbjct: 352 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI 411
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ L L + +T+EA ++ RM + P+V TY +++ MF D A W
Sbjct: 412 VTYNCFLRVLCENRKTDEALKLYGRMV-ESRCAPSVQTYNMLISMFFEMDDPDGAFNTWT 470
Query: 246 EMKARGVLPVMHMYSTLINSL--CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM R + + Y +IN L CH K +AC +E+++ G++ P ++F + L +
Sbjct: 471 EMDKRDCVQDVETYCAMINGLFDCHRAK--EACFLLEEVVNKGLKLPYRVFDSFLMRLSE 528
Query: 304 EG 305
G
Sbjct: 529 VG 530
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
+P++ ++ ++++A C E L R M KP + F L G + +A++
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG---PNTRTYDIVLH 193
+ + G +PE TY A + +C + +++A + D M G P +T+ +++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K + EE + + RM G P VSTY+ V+ C +VD A + DEM +G
Sbjct: 350 ALAKNDKAEECFELIGRMI-STGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 408
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P + Y+ + LC K D+A K + M++ P Q ++ L
Sbjct: 409 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNML 452
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 105/237 (44%), Gaps = 5/237 (2%)
Query: 94 KRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
+RY V+ F + + K P I F L++ L + E + + R +P+A
Sbjct: 211 ERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDAN 269
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
T+N + +C A ++++EM + G P TY + +AG +EA +F M
Sbjct: 270 TFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM 329
Query: 212 SRKPG--TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
K + PT T+ +++ N + + + M + G LP + Y +I +C
Sbjct: 330 ITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMA 389
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+K+D+A K+ EM + G P ++ + L + + A+ L ++ + R P V
Sbjct: 390 EKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSV 446
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 3/207 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR---RFDPDIKSYTILLEGWGQ 57
M + G K E + IDT C++ V+ A ++FD M + P K++ +++ +
Sbjct: 294 MIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAK 353
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
E+ M G PDV +Y +I C A++ DEA + EM P
Sbjct: 354 NDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVT 413
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ + L ++ EAL+ +G+ + P TYN ++ + + A+ EM
Sbjct: 414 YNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMD 473
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEA 204
K + TY +++ L R +EA
Sbjct: 474 KRDCVQDVETYCAMINGLFDCHRAKEA 500
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 164/337 (48%), Gaps = 19/337 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++++I LC + VE+A +F +MK PD+ +YTIL++ + + +
Sbjct: 283 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 342
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM+ G P VV+Y +I+A+ AK+ +A ++F M C+P+ + L++G
Sbjct: 343 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 402
Query: 125 LGSEKRLSEALQ----------------FFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
L +S+A + +F + P TY A+V C + +++
Sbjct: 403 LCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDH 462
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-EIV 227
A+ ++D M G PN YD ++ KAG+ + A VF +M+ K G P+V TY ++
Sbjct: 463 AHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT-KCGYLPSVHTYTSLI 521
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
RMF + ++D+AM++ +M P + Y+ +I+ LC + + A K M + G
Sbjct: 522 DRMF-KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 580
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P ++ L L G + ++ L ++ + +P
Sbjct: 581 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 617
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 34/297 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID CK+ ++ AQEVF +M K + P + +YT L++ + L +V +M
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D P+VV+Y MI+ C ++A++L ME C P+ + LI+GLG ++
Sbjct: 542 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA------------------YR--- 171
+L F Q ++G P TY ++ C + ++ A YR
Sbjct: 602 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAI 661
Query: 172 ------------MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+++EM G P Y +++ KAGR E A + K M P +
Sbjct: 662 QGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVK 721
Query: 220 TVS-TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
T + Y +++ C +QV+ A R++ EM RG +P + ++ LI L K D+A
Sbjct: 722 TDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 152/336 (45%), Gaps = 20/336 (5%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + +F R LC ++A ++ +M ++ F PD +Y+ ++ +
Sbjct: 253 KVNVANFAR---CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 309
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++EMK G PDV +Y I+I++ C A ++A LF EM + C P+ + LI+
Sbjct: 310 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG------ 180
K++ +A F + G P TY A+V C + I+ A+ + ++
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429
Query: 181 ----------IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ PN TY ++ L KA + + A+ + M G EP Y+ ++
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM-LSSGCEPNHIVYDALIDG 488
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
FC ++D A ++ +M G LP +H Y++LI+ + + +LD A K +ML P
Sbjct: 489 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
++ + L G E A+ L +++ +P V
Sbjct: 549 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 584
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 150/302 (49%), Gaps = 5/302 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D+ L + + L+D LCK+ V+ A E+ D M +P+ Y L++G+ + +
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
S EV+ +M G+ P V +Y +I+ R D A+++ +M +C P+ + +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL +AL+ +++G P TY A++ + +I+ + + +M + G
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY ++++HL AG ++A + M ++ + Y ++ F + ++
Sbjct: 616 SPNYVTYRVLINHLCAAGLLDKARLLLGEM-KQTYWPKYLQGYRCAIQGF--SKSFIASL 672
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI--GIRPPGQLFSNLKQ 299
I +EM++ G +P+ +Y LI+ +L+ A + +EM+++ ++ ++++L Q
Sbjct: 673 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 732
Query: 300 AL 301
AL
Sbjct: 733 AL 734
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 139/344 (40%), Gaps = 51/344 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPD---IKSYTILLEGWGQ 57
+ FG + +N L+ L + V+ V +M + F D + + L G+
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ L M E ++D F+ D V MI+ A +DEA+ M +C P+
Sbjct: 91 WADALDMIE-----RED-FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TL++G +K+L + G P +N++V +YC AY++++ M
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 178 KCGIGPNTRTYDIVLHH-----------------------------------------LI 196
CG P Y+I + L
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
G+ ++A+ + K M RK G P STY V+ C+ +V+ A ++ EMK GV P +
Sbjct: 265 GVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ Y+ LI+S C ++ A F+EM +G P ++ L A
Sbjct: 324 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 367
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 145/370 (39%), Gaps = 56/370 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-WGQQK----NLLSMNE- 66
FN L+ + C + A ++ ++M P Y I + GQ+K +LL + E
Sbjct: 180 FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEK 239
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y EM + V+ C ++D+A +L +EM P + +I L
Sbjct: 240 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 299
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A F + K G P+ TY ++ ++C + I A + +EMR G P
Sbjct: 300 HATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV 359
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRM--------------------------------SRK 214
TY ++H +KA + +A +F RM ++
Sbjct: 360 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Query: 215 PGTE------------------PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
GT P V TY +V C +VD A + D M + G P
Sbjct: 420 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
+Y LI+ C K+D A + F +M G P +++L + +G + A+ + +
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539
Query: 317 IDKLRKTPLV 326
+ K TP V
Sbjct: 540 MLKDSCTPNV 549
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 39/174 (22%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + LI+ LC + +++A+ + +MK+ + ++ Y ++G+ K+
Sbjct: 610 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKS 667
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMIN-------------------------------- 88
++ + EM+ G P YG++I+
Sbjct: 668 FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMY 727
Query: 89 -----AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
A C A + +EA L+ EM P +F LI GL K+ EALQ
Sbjct: 728 ASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 164/324 (50%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + + + LI+ +S +E A+++FD+M K+ +PD+ YT ++ + N
Sbjct: 249 MEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGN 308
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + P+ +YG +IN C A A + +M++ + IF T
Sbjct: 309 MKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNT 368
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + + EAL+ +++GFE +A T N + +C S R +A R++ M + G
Sbjct: 369 LMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG 428
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN ++ I++ K EA +FK M +K G P+V TY + +C +++ A
Sbjct: 429 VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKK-GKAPSVVTYNAFIERYCKKGKMEEA 487
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ +EM+ RG++P + Y++LI+ +D A + F EM +G+ ++ +
Sbjct: 488 YKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISG 547
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +G + A L +++K P
Sbjct: 548 LSKDGRADEAFKLYDEMNKEGIVP 571
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 1/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N L++ + + V E+ M+K D ++ +YT+L+E + + +
Sbjct: 218 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 277
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ EM G EPDV Y +IN +C A LF EM P+ + + LING
Sbjct: 278 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 337
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ A + +G + +N ++ YC I++A R+ + M++ G +
Sbjct: 338 ACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 397
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T +I+ ++ R EEA + M + G P V ++ I++ ++C A R++
Sbjct: 398 AFTCNIIASGFCRSNRREEAKRLLLTMEER-GVAPNVVSFSILIDIYCKEQNFAEARRLF 456
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M+ +G P + Y+ I C + K+++A K EM + G+ P +++L R
Sbjct: 457 KVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERAS 516
Query: 305 GMEETAVVLAQKIDKL 320
G + A+ L ++ +L
Sbjct: 517 GNVDRALELFNEMPQL 532
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+D CK ++ A + + M+++ F+ D + I+ G+ + + M+
Sbjct: 366 FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTME 425
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+VVS+ I+I+ +C + + EA LF+ ME PS + I + ++
Sbjct: 426 ERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKME 485
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + ++RG P+ TY +++ S ++ A + +EM + G+ N TY +++
Sbjct: 486 EAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVII 545
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
L K GR +EA+ ++ M+ K G P Y ++
Sbjct: 546 SGLSKDGRADEAFKLYDEMN-KEGIVPDDGIYSSLI 580
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 93/186 (50%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N + C+S E A+ + M++R P++ S++IL++ + +++N +++ M+
Sbjct: 402 NIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEK 461
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G P VV+Y I +C + +EA +L EM+ P + + +LI+G + +
Sbjct: 462 KGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDR 521
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL+ F + + G TY ++ R ++A+++ DEM K GI P+ Y ++
Sbjct: 522 ALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIA 581
Query: 194 HLIKAG 199
L K G
Sbjct: 582 SLHKVG 587
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 119/255 (46%), Gaps = 1/255 (0%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+R + + EVFD +K+ F+ D +S L + N+ E R+M D G E V S
Sbjct: 131 NRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCS 190
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ +++ C A L E+ KPS + TL+NG K + + +
Sbjct: 191 WTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLME 250
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
K + TY ++ Y S +I +A ++ DEM K GI P+ Y +++ K G +
Sbjct: 251 KNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMK 310
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
A+ +F M+ + P TY ++ C ++ A + ++M+++GV +++TL
Sbjct: 311 RAFVLFDEMTERRLV-PNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 369
Query: 263 INSLCHEDKLDDACK 277
++ C + +D+A +
Sbjct: 370 MDGYCKKGMIDEALR 384
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 130/306 (42%), Gaps = 36/306 (11%)
Query: 19 TLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
L +S ++E E +M + + S+T +++G ++ ++ + E+ GF+P
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221
Query: 79 DVVSYGIMINAHCSAK-----------------------------------RYDEAVELF 103
V++Y ++N + K + +EA +LF
Sbjct: 222 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 281
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
EM +P +I+ ++IN + A F + +R P A TY A++ C +
Sbjct: 282 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 341
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ A M+++M+ G+ N ++ ++ K G +EA + M +K G E T
Sbjct: 342 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK-GFEIDAFT 400
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
I+ FC + + + A R+ M+ RGV P + +S LI+ C E +A + F+ M
Sbjct: 401 CNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 460
Query: 284 DIGIRP 289
G P
Sbjct: 461 KKGKAP 466
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 164/324 (50%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + + + LI+ +S +E A+++FD+M K+ +PD+ YT ++ + N
Sbjct: 253 MEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGN 312
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + P+ +YG +IN C A A + +M++ + IF T
Sbjct: 313 MKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNT 372
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + + EAL+ +++GFE +A T N + +C S R +A R++ M + G
Sbjct: 373 LMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERG 432
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN ++ I++ K EA +FK M +K G P+V TY + +C +++ A
Sbjct: 433 VAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKK-GKAPSVVTYNAFIERYCKKGKMEEA 491
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ +EM+ RG++P + Y++LI+ +D A + F EM +G+ ++ +
Sbjct: 492 YKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISG 551
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +G + A L +++K P
Sbjct: 552 LSKDGRADEAFKLYDEMNKEGIVP 575
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 1/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N L++ + + V E+ M+K D ++ +YT+L+E + + +
Sbjct: 222 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 281
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ EM G EPDV Y +IN +C A LF EM P+ + + LING
Sbjct: 282 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 341
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ A + +G + +N ++ YC I++A R+ + M++ G +
Sbjct: 342 ACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 401
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T +I+ ++ R EEA + M + G P V ++ I++ ++C A R++
Sbjct: 402 AFTCNIIASGFCRSNRREEAKRLLLTMEER-GVAPNVVSFSILIDIYCKEQNFAEARRLF 460
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M+ +G P + Y+ I C + K+++A K EM + G+ P +++L R
Sbjct: 461 KVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERAS 520
Query: 305 GMEETAVVLAQKIDKL 320
G + A+ L ++ +L
Sbjct: 521 GNVDRALELFNEMPQL 536
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+D CK ++ A + + M+++ F+ D + I+ G+ + + M+
Sbjct: 370 FNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTME 429
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+VVS+ I+I+ +C + + EA LF+ ME PS + I + ++
Sbjct: 430 ERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKME 489
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + ++RG P+ TY +++ S ++ A + +EM + G+ N TY +++
Sbjct: 490 EAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVII 549
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
L K GR +EA+ ++ M+ K G P Y ++
Sbjct: 550 SGLSKDGRADEAFKLYDEMN-KEGIVPDDGIYSSLI 584
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 93/186 (50%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N + C+S E A+ + M++R P++ S++IL++ + +++N +++ M+
Sbjct: 406 NIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEK 465
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G P VV+Y I +C + +EA +L EM+ P + + +LI+G + +
Sbjct: 466 KGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDR 525
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL+ F + + G TY ++ R ++A+++ DEM K GI P+ Y ++
Sbjct: 526 ALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIA 585
Query: 194 HLIKAG 199
L K G
Sbjct: 586 SLHKVG 591
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 119/255 (46%), Gaps = 1/255 (0%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
+R + + EVFD +K+ F+ D +S L + N+ E R+M D G E V S
Sbjct: 135 NRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCS 194
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ +++ C A L E+ KPS + TL+NG K + + +
Sbjct: 195 WTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLME 254
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
K + TY ++ Y S +I +A ++ DEM K GI P+ Y +++ K G +
Sbjct: 255 KNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMK 314
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
A+ +F M+ + P TY ++ C ++ A + ++M+++GV +++TL
Sbjct: 315 RAFVLFDEMTERRLV-PNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTL 373
Query: 263 INSLCHEDKLDDACK 277
++ C + +D+A +
Sbjct: 374 MDGYCKKGMIDEALR 388
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 130/306 (42%), Gaps = 36/306 (11%)
Query: 19 TLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
L +S ++E E +M + + S+T +++G ++ ++ + E+ GF+P
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225
Query: 79 DVVSYGIMINAHCSAK-----------------------------------RYDEAVELF 103
V++Y ++N + K + +EA +LF
Sbjct: 226 SVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLF 285
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
EM +P +I+ ++IN + A F + +R P A TY A++ C +
Sbjct: 286 DEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKA 345
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ A M+++M+ G+ N ++ ++ K G +EA + M +K G E T
Sbjct: 346 GEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK-GFEIDAFT 404
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
I+ FC + + + A R+ M+ RGV P + +S LI+ C E +A + F+ M
Sbjct: 405 CNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVME 464
Query: 284 DIGIRP 289
G P
Sbjct: 465 KKGKAP 470
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 157/337 (46%), Gaps = 34/337 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K ++ +LI L S+ E+A V + +++ DPD +Y ++ G+ +
Sbjct: 103 MVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG-DPDSFAYNAVISGFCRSDR 161
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ N V MK GF PDVV+Y I+I + C+ + D A+++ ++ NC P+ +
Sbjct: 162 FDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTI 221
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY---------- 170
LI + +A++ + RG +P+ TYN +V C ++ A+
Sbjct: 222 LIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTP 281
Query: 171 ----------------------RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
R+M +M G PN TY +++ L + G+ EA V
Sbjct: 282 SLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVL 341
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+ M K G P Y+ ++ FC +VD+A+ D+M + G LP + Y+T++ SLC
Sbjct: 342 RVMKEK-GLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCK 400
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ + D+A F+++ ++G P ++ + AL G
Sbjct: 401 KGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSG 437
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 147/316 (46%), Gaps = 10/316 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK--RRFDPDIKSYTILLEG-WGQQKNL 61
GL+ ++ +N ++ +CK V+RA E + ++ +L EG W + L
Sbjct: 246 GLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERL 305
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+S +M G EP++V+Y ++I++ C + EAV++ R M+ P + + L
Sbjct: 306 MS------DMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPL 359
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ E ++ A+ F G+ P+ YN ++G+ C R ++A + ++ + G
Sbjct: 360 ISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGC 419
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN +Y+ + L +G A ++ M G +P TY ++ C + VD A+
Sbjct: 420 PPNASSYNTMFGALWSSGDKIRALTMILEMLSN-GVDPDRITYNSLISSLCRDGMVDEAI 478
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ +M+ P + Y+ ++ LC ++ DA + M+D G +P ++ L + +
Sbjct: 479 GLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGV 538
Query: 302 RDEGMEETAVVLAQKI 317
G AV LA+ +
Sbjct: 539 GYAGWRSYAVELAKSL 554
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 104/197 (52%), Gaps = 4/197 (2%)
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCT-LINGLGSEKRLSEALQFFGQSKKRG 145
+N C +Y EA+ +M KP I CT LI GL + KR +A++ ++ G
Sbjct: 84 LNRLCKTGKYTEALYFLEQMVKRGYKPDV-ILCTKLIKGLFTSKRTEKAVRVMEILEQYG 142
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P++ YNAV+ +C S R + A R++ M+ G P+ TY+I++ L G+ + A
Sbjct: 143 -DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLAL 201
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
V ++ + PTV TY I++ + +D AMR+ DEM +RG+ P M+ Y+ ++
Sbjct: 202 KVMDQL-LEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRG 260
Query: 266 LCHEDKLDDACKYFQEM 282
+C +D A ++ +
Sbjct: 261 MCKRGLVDRAFEFVSNL 277
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N LI +LC+ V+ A + M++ + P + SY I+L G + ++
Sbjct: 453 GVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDA 512
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
EV M D+G +P+ +Y +++ A AVEL + + + N
Sbjct: 513 IEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLVSMN 558
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 153/319 (47%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL +N L+ +C+ ++ AQE+FD+M +R PD+ S++ L+ + +
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +REM+ G PD V Y I+I+ C +A+++ EM A C + T
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+NGL +K ++A F + +RG P+ T+ ++ YC ++ A + + M +
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ KAG A ++ M RK P +Y V+ FC + + A
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD-IIPDHISYGTVLNGFCSSGLLPEA 591
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + D+M +G+ P + +TLI C + A +Y +M+ GI P ++ L
Sbjct: 592 LNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Query: 301 LRDEGMEETAVVLAQKIDK 319
E E A +L +++K
Sbjct: 652 YLKEANLEKAFILINEMEK 670
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 141/285 (49%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N ++ LCK + A +F++M +R PD ++T L+ G+ + N+
Sbjct: 462 GCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M +PD V+Y +I+ C A A EL+ +M + P + T++NG
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNG 581
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
S L EAL Q ++G P T N ++ YC S + AY + +M GI P+
Sbjct: 582 FCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPD 641
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ +Y+ ++ +K E+A+ + M ++ G + + TY +++ FC ++ A ++
Sbjct: 642 SFSYNTLIDGYLKEANLEKAFILINEMEKR-GLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M G+ P YS+LIN +D + +A ++ EML G+ P
Sbjct: 701 RKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L +N ++ LCK +RA++V +M + P+ +Y LL ++ N+L
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ EM G PD+VS+ +I +A+ FREME + P I+ LI+G
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
LS+AL+ + RG + TYN + C DA + +EM + G+ P+
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++ K G ++A ++F+ M R +P TY ++ FC ++ A +W
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVR-TNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D+M + ++P Y T++N C L +A +ML+ GIRP
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 147/297 (49%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G+ + + LID C++ + A ++ D+M R D+ +Y L G ++K
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + G PD ++ +I +C D+A+ LF M TN KP + T
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + A + + ++ P+ +Y V+ +C S + +A + D+M + G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T + ++ ++G +AY +M G P +Y ++ + A ++ A
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN-GIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ +EM+ RG+ + Y+ ++N C E K+ +A + ++M++IGI P G +S+L
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSL 718
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 151/356 (42%), Gaps = 41/356 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L+ T +++ + E F ++++ I + LL G + + E+Y E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G E +V + IM+NA C ++++ + +ME + TLIN E +
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA Q RG EP TYNA++ C + + A ++ EM + G+ PN TY+ +L
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 193 HHLIKAGRTEEAYSVFKRMSR----------------------------------KPGTE 218
+ + EA +F MSR + G
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P Y I++ FC N + A+++ DEM ARG + Y+T +N LC + DA
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ-------KIDKLRKTPLVD 327
F EM++ G+ P F+ L + +G + A+ L + K DK+ L+D
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 130/293 (44%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + N +++ LCK R E M+ + DI +Y L+ + ++ +
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ G EP +++Y ++ C +YD A ++ EM P+ + TL+
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + EA + F + +RG P+ ++++++G + + A EM + GI P+
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y I++ + G +A + M + G V TY + C A ++
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLAR-GCFMDVVTYNTFLNGLCKKKMFADADMLF 490
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+EM RG++P + ++TLI C + +D A F+ M+ ++P ++ L
Sbjct: 491 NEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + LK + +N LID CK+ + RA+E++D M ++ PD SY +L G+
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +M + G P++V+ +I +C + +A E +M + P + T
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G E L +A + +KRG + TYN ++ +C ++ +A +++ +M + G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
I P+ TY +++ + +EA+ M ++
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L N LI C+S + +A E KM PD SY L++G+ ++ NL
Sbjct: 602 GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM+ G + ++++Y +++N C+ + EA ++ R+M P + +LING
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPE 149
S+ + EA +F + +RG P+
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLVPD 746
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 155/312 (49%), Gaps = 16/312 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-----W 55
M + GL + +F LI+ LCK +++A E+ ++M +R + P++ ++T L++G W
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
++ L + V + DG++P+V +Y MIN +C + + A L M+ P+
Sbjct: 345 TEKAFRLFLKLV----RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400
Query: 116 HIFCTLING---LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ + TLI+G +G+ R E + G K GF P TYNA++ C +++AYR+
Sbjct: 401 NTYTTLIDGHCKVGNFVRAYELMDLMG---KEGFSPNIYTYNAIIDGLCKKGSLDEAYRL 457
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
++++ G+ + TY I++ + T + F +M K G P + +Y ++ FC
Sbjct: 458 LNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM-LKVGFTPDIHSYTTLISXFC 516
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
Q+ + R+++E + G++P Y+++I C A K FQ M + G P
Sbjct: 517 RQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSI 576
Query: 293 LFSNLKQALRDE 304
+ L L E
Sbjct: 577 TYGALISGLCKE 588
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 137/287 (47%), Gaps = 10/287 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK + RA E+ D M K F P+I +Y +++G ++
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKG- 449
Query: 61 LLSMNEVYREMKD---DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
S++E YR + G + D V+Y I+++ HC + ++ F +M P H
Sbjct: 450 --SLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHS 507
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TLI+ +K++ E+ + F ++ G P TY +++ YC + A ++ M
Sbjct: 508 YTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMS 567
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G P++ TY ++ L K + ++A +++ M K G P T + +C
Sbjct: 568 NHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK-GLSPCEVTRLTLAYEYCKKDDS 626
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
A+ + D ++ R + ++ TL+ LC E KLD A +F ++LD
Sbjct: 627 STAINVLDRLEKRQWIRTVN---TLVRKLCSEGKLDMAALFFHKLLD 670
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 142/357 (39%), Gaps = 44/357 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL N ++D VE A+ +F +M +R PD S+ +++
Sbjct: 180 MQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGR 239
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L + M + GF D + ++I+A C + V F +M P+ F
Sbjct: 240 VLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTA 299
Query: 121 LINGLGSEKRLSEALQFFGQSKKR------------------------------------ 144
LINGL + + +A + + +R
Sbjct: 300 LINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSD 359
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G++P TY A++ YC ++N A ++ M++ G+ PNT TY ++ K G A
Sbjct: 360 GYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRA 419
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
Y + M K G P + TY ++ C +D A R+ +++ G+ Y+ L++
Sbjct: 420 YELMDLMG-KEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMS 478
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-------KQALRDEGMEETAVVLA 314
C + + + +F +ML +G P ++ L KQ E + E AV L
Sbjct: 479 VHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLG 535
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ EM G PD VS+ +M+ A C+ R EA + M +I+
Sbjct: 211 MFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFC 270
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ ++ + +F + + G P + A++ C I A+ +++EM + G PN
Sbjct: 271 QKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVY 330
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T+ ++ L K G TE+A+ +F ++ R G +P V TY ++ +C +++ A +
Sbjct: 331 THTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSR 390
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M+ +G++P + Y+TLI+ C A + M G P ++ + L +G
Sbjct: 391 MQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGS 450
Query: 307 EETAVVLAQKID 318
+ A L K+
Sbjct: 451 LDEAYRLLNKVS 462
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 104/229 (45%), Gaps = 2/229 (0%)
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM++ G + +++ + A +F EM P F ++ +
Sbjct: 179 EMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMG 238
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R+ EA ++ +RGF + T ++ A+C +N +M + G+ PN +
Sbjct: 239 RVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-K 248
+++ L K G ++A+ + + M R+ G +P V T+ ++ C + A R++ ++ +
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRR-GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVR 357
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ G P +H Y+ +IN C EDKL+ A M + G+ P ++ L
Sbjct: 358 SDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 77/153 (50%), Gaps = 1/153 (0%)
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
++ +A M+ EM+ G+ +T+T + VL + G E A ++F M ++ G P ++
Sbjct: 169 KLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQR-GVSPDCVSF 227
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++V C +V A + + M RG + + +I++ C + ++ YF +M++
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+G+ P F+ L L +G + A L +++
Sbjct: 288 MGLAPNVINFTALINGLCKQGSIKQAFELLEEM 320
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 164/337 (48%), Gaps = 19/337 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++++I LC + VE+A +F +MK PD+ +YTIL++ + + +
Sbjct: 218 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 277
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM+ G P VV+Y +I+A+ AK+ +A ++F M C+P+ + L++G
Sbjct: 278 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 337
Query: 125 LGSEKRLSEALQ----------------FFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
L +S+A + +F + P TY A+V C + +++
Sbjct: 338 LCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDH 397
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-EIV 227
A+ ++D M G PN YD ++ KAG+ + A VF +M+ K G P+V TY ++
Sbjct: 398 AHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT-KCGYLPSVHTYTSLI 456
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
RMF + ++D+AM++ +M P + Y+ +I+ LC + + A K M + G
Sbjct: 457 DRMF-KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 515
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P ++ L L G + ++ L ++ + +P
Sbjct: 516 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 552
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 34/297 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID CK+ ++ AQEVF +M K + P + +YT L++ + L +V +M
Sbjct: 417 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 476
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D P+VV+Y MI+ C ++A++L ME C P+ + LI+GLG ++
Sbjct: 477 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 536
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA------------------YR--- 171
+L F Q ++G P TY ++ C + ++ A YR
Sbjct: 537 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAI 596
Query: 172 ------------MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+++EM G P Y +++ KAGR E A + K M P +
Sbjct: 597 QGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVK 656
Query: 220 TVS-TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
T + Y +++ C +QV+ A R++ EM RG +P + ++ LI L K D+A
Sbjct: 657 TDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 713
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 152/336 (45%), Gaps = 20/336 (5%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + +F R LC ++A ++ +M ++ F PD +Y+ ++ +
Sbjct: 188 KVNVANFAR---CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 244
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++EMK G PDV +Y I+I++ C A ++A LF EM + C P+ + LI+
Sbjct: 245 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 304
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG------ 180
K++ +A F + G P TY A+V C + I+ A+ + ++
Sbjct: 305 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 364
Query: 181 ----------IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ PN TY ++ L KA + + A+ + M G EP Y+ ++
Sbjct: 365 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM-LSSGCEPNHIVYDALIDG 423
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
FC ++D A ++ +M G LP +H Y++LI+ + + +LD A K +ML P
Sbjct: 424 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 483
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
++ + L G E A+ L +++ +P V
Sbjct: 484 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 519
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 150/302 (49%), Gaps = 5/302 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D+ L + + L+D LCK+ V+ A E+ D M +P+ Y L++G+ + +
Sbjct: 371 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 430
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
S EV+ +M G+ P V +Y +I+ R D A+++ +M +C P+ + +
Sbjct: 431 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 490
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL +AL+ +++G P TY A++ + +I+ + + +M + G
Sbjct: 491 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 550
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY ++++HL AG ++A + M ++ + Y ++ F + ++
Sbjct: 551 SPNYVTYRVLINHLCAAGLLDKARLLLGEM-KQTYWPKYLQGYRCAIQGF--SKSFIASL 607
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI--GIRPPGQLFSNLKQ 299
I +EM++ G +P+ +Y LI+ +L+ A + +EM+++ ++ ++++L Q
Sbjct: 608 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 667
Query: 300 AL 301
AL
Sbjct: 668 AL 669
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 133/298 (44%), Gaps = 7/298 (2%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
+I L ++ + + A +M+ P++ +Y LL G+ ++K L + M
Sbjct: 46 THMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMT 105
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+G P+ + +++++C+ K Y A +L M C P ++ I + +++L
Sbjct: 106 EGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPS 165
Query: 134 ------ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
A + +G+ C + + A++++ EM + G P+T T
Sbjct: 166 PDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTST 225
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y V+ L A + E+A+ +F+ M + G P V TY I++ FC ++ A +++EM
Sbjct: 226 YSKVITFLCHATKVEKAFLLFQEM-KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 284
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++ G P + Y+ LI++ ++ A F M+D G RP + L L G
Sbjct: 285 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 342
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 145/370 (39%), Gaps = 56/370 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-WGQQK----NLLSMNE- 66
FN L+ + C + A ++ ++M P Y I + GQ+K +LL + E
Sbjct: 115 FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEK 174
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y EM + V+ C ++D+A +L +EM P + +I L
Sbjct: 175 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 234
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A F + K G P+ TY ++ ++C + I A + +EMR G P
Sbjct: 235 HATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV 294
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRM--------------------------------SRK 214
TY ++H +KA + +A +F RM ++
Sbjct: 295 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 354
Query: 215 PGTE------------------PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
GT P V TY +V C +VD A + D M + G P
Sbjct: 355 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 414
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
+Y LI+ C K+D A + F +M G P +++L + +G + A+ + +
Sbjct: 415 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 474
Query: 317 IDKLRKTPLV 326
+ K TP V
Sbjct: 475 MLKDSCTPNV 484
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 42/266 (15%)
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F+ D V MI+ A +DEA+ M +C P+ + TL++G +K+L
Sbjct: 38 FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCK 97
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH- 194
+ G P +N++V +YC AY++++ M CG P Y+I +
Sbjct: 98 RIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 157
Query: 195 ----------------------------------------LIKAGRTEEAYSVFKRMSRK 214
L G+ ++A+ + K M RK
Sbjct: 158 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 217
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P STY V+ C+ +V+ A ++ EMK GV P ++ Y+ LI+S C ++
Sbjct: 218 -GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQ 276
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQA 300
A F+EM +G P ++ L A
Sbjct: 277 AQWLFEEMRSVGCSPTVVTYTALIHA 302
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 39/174 (22%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + LI+ LC + +++A+ + +MK+ + ++ Y ++G+ K+
Sbjct: 545 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKS 602
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMIN-------------------------------- 88
++ + EM+ G P YG++I+
Sbjct: 603 FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMY 662
Query: 89 -----AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
A C A + +EA L+ EM P +F LI GL K+ EALQ
Sbjct: 663 ASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 145/307 (47%), Gaps = 3/307 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQ 58
M + G + + ++ LC ++A ++ M K PD+ +Y ++ G+ ++
Sbjct: 70 MTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKE 129
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ +Y EM GF PDVV++ +INA C A+ D A L R+M P+ +
Sbjct: 130 GKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTY 189
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++I+G + R EA + F + RG P+ ++N+ + + C R +A + M
Sbjct: 190 TSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAA 249
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G PN TY I+LH G + S F M + G + I++ + +D
Sbjct: 250 KGHRPNIVTYGILLHGYATEGCFADMMSFFNTM-KGDGIVANCLVFTILIDAYAKRGMMD 308
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM I EM+ +G+ P + YSTLI++LC +L DA F +M+ G++P ++ +L
Sbjct: 309 EAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLI 368
Query: 299 QALRDEG 305
Q G
Sbjct: 369 QGFCTHG 375
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 144/294 (48%), Gaps = 2/294 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ N +I+ LCK+R V+ A+ + +M P+ +YT ++ G+
Sbjct: 146 GFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEA 205
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++REM G PD+VS+ +++ C R EA E+F M A +P+ + L++G
Sbjct: 206 TKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHG 265
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+E ++ + FF K G + ++ AY +++A ++ EM+ G+ P+
Sbjct: 266 YATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPD 325
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L + GR +A F +M G +P Y +++ FC + + A +
Sbjct: 326 VFTYSTLISALCRMGRLADAVDKFNQMI-GTGVQPNTVVYHSLIQGFCTHGDLVKAKELV 384
Query: 245 DEMKARGV-LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
EM G+ P + ++++++S+C E ++ DA F + DIG R +F+ L
Sbjct: 385 YEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTL 438
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 149/321 (46%), Gaps = 2/321 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ ++ LI LC+ + A + F++M P+ Y L++G+ +L+
Sbjct: 321 GLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKA 380
Query: 65 NEVYREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E+ EM ++G P++ + ++++ C R +A +F ++ + +F TLI+
Sbjct: 381 KELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLID 440
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G + +A G P+ TYN +V Y S RI+D + EM I P
Sbjct: 441 GYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKP 500
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
T TY+I+L L +AGRT A + M GT ++ TY I+++ C N D A+ +
Sbjct: 501 TTVTYNIILDGLFRAGRTVAAQKMLHEMI-GCGTTVSLPTYNIILKGLCRNNCTDEAIVM 559
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ ++ V + +T+INS+ + ++A F + D G+ P + + + L
Sbjct: 560 FQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLK 619
Query: 304 EGMEETAVVLAQKIDKLRKTP 324
EG E A + ++K P
Sbjct: 620 EGSVEEADNMFSSMEKSGCAP 640
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 146/315 (46%), Gaps = 4/315 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL-SMNEVYREM 71
+ +++ C++R E F ++ + D + +L+ K ++ + R M
Sbjct: 11 YGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRM 70
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIFCTLINGLGSEK 129
+ G PD SY I++ C R +A++L R M E C P + T+I+G E
Sbjct: 71 TELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEG 130
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ +A + + ++GF P+ T+N+++ A C + +++A ++ +M G+ PN TY
Sbjct: 131 KIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYT 190
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++H GR EEA +F+ M+ + G P + ++ + C + + A I+ M A
Sbjct: 191 SMIHGYSTLGRWEEATKMFREMTGR-GLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAA 249
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+G P + Y L++ E D +F M GI +F+ L A GM +
Sbjct: 250 KGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDE 309
Query: 310 AVVLAQKIDKLRKTP 324
A+++ ++ +P
Sbjct: 310 AMLILSEMQGQGLSP 324
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN ++ ++CK V A +FD +K DI + L++G+ + V M
Sbjct: 400 FNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMI 459
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD +Y ++N + + R D+ + LFREM KP+ + +++GL R
Sbjct: 460 SAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTV 519
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + G PTYN ++ C + ++A M ++ + N T + ++
Sbjct: 520 AAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMI 579
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + R EEA +F +S G P STY I++R V+ A ++ M+ G
Sbjct: 580 NSMYTVQRREEAKDLFSAIS-DSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGC 638
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P + + I +L + ++ A Y ++
Sbjct: 639 APCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 144/325 (44%), Gaps = 8/325 (2%)
Query: 1 MDKF------GLKQELPDFNRLIDTLCKSRHVERAQE-VFDKMKKRRFDPDIKSYTILLE 53
+DKF G++ ++ LI C + +A+E V++ M P+I + ++
Sbjct: 346 VDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVH 405
Query: 54 GWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
++ ++ + ++ +KD G D++ + +I+ +C +A + M + P
Sbjct: 406 SICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGP 465
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+ TL+NG R+ + L F + + +P TYN ++ + R A +M+
Sbjct: 466 DTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKML 525
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
EM CG + TY+I+L L + T+EA +F+++ + ++T ++
Sbjct: 526 HEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTM-NVKFNITTLNTMINSMYT 584
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
+ + A ++ + G++P Y +I +L E +++A F M G P +L
Sbjct: 585 VQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRL 644
Query: 294 FSNLKQALRDEGMEETAVVLAQKID 318
++ + L ++G A K+D
Sbjct: 645 LNDTIRTLLEKGEIVKAGNYMSKVD 669
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 100/200 (50%), Gaps = 2/200 (1%)
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR- 171
P+ + ++NG +R L FFG+ + G + + N V+ C + R +DA +
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT-EPTVSTYEIVVRM 230
++ M + G P+ +Y IVL L R+++A + + M+++ G P V TY V+
Sbjct: 66 LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
F ++ A ++ EM +G +P + ++++IN+LC +D+A ++M+D G+ P
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185
Query: 291 GQLFSNLKQALRDEGMEETA 310
++++ G E A
Sbjct: 186 KVTYTSMIHGYSTLGRWEEA 205
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 153/319 (47%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL +N L+ +C+ ++ AQE+FD+M +R PD+ S++ L+ + +
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +REM+ G PD V Y I+I+ C +A+++ EM A C + T
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNT 472
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+NGL +K ++A F + +RG P+ T+ ++ YC ++ A + + M +
Sbjct: 473 FLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTN 532
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ KAG A ++ M RK P +Y V+ FC + + A
Sbjct: 533 LKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKD-IIPDHISYGTVLNGFCSSGLLPEA 591
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + D+M +G+ P + +TLI C + A +Y +M+ GI P ++ L
Sbjct: 592 LNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Query: 301 LRDEGMEETAVVLAQKIDK 319
E E A +L +++K
Sbjct: 652 YLKEANLEKAFILINEMEK 670
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 141/285 (49%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N ++ LCK + A +F++M +R PD ++T L+ G+ + N+
Sbjct: 462 GCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKA 521
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M +PD V+Y +I+ C A A EL+ +M + P + T++NG
Sbjct: 522 LNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNG 581
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
S L EAL Q ++G P T N ++ YC S + AY + +M GI P+
Sbjct: 582 FCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPD 641
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ +Y+ ++ +K E+A+ + M ++ G + + TY +++ FC ++ A ++
Sbjct: 642 SFSYNTLIDGYLKEANLEKAFILINEMEKR-GLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M G+ P YS+LIN +D + +A ++ EML G+ P
Sbjct: 701 RKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L +N ++ LCK +RA++V +M + P+ +Y LL ++ N+L
Sbjct: 322 GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEA 381
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ EM G PD+VS+ +I +A+ FREME + P I+ LI+G
Sbjct: 382 QEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDG 441
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
LS+AL+ + RG + TYN + C DA + +EM + G+ P+
Sbjct: 442 FCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPD 501
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++ K G ++A ++F+ M R +P TY ++ FC ++ A +W
Sbjct: 502 FYTFTTLIRGYCKDGNMDKALNLFEAMVR-TNLKPDKVTYNTLIDGFCKAGEMGRAKELW 560
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D+M + ++P Y T++N C L +A +ML+ GIRP
Sbjct: 561 DDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 147/297 (49%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G+ + + LID C++ + A ++ D+M R D+ +Y L G ++K
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + G PD ++ +I +C D+A+ LF M TN KP + T
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + A + + ++ P+ +Y V+ +C S + +A + D+M + G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T + ++ ++G +AY +M G P +Y ++ + A ++ A
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN-GIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ +EM+ RG+ + Y+ ++N C E K+ +A + ++M++IGI P G +S+L
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSL 718
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 151/356 (42%), Gaps = 41/356 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L+ T +++ + E F ++++ I + LL G + + E+Y E+
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G E +V + IM+NA C ++++ + +ME + TLIN E +
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA Q RG EP TYNA++ C + + A ++ EM + G+ PN TY+ +L
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 193 HHLIKAGRTEEAYSVFKRMSR----------------------------------KPGTE 218
+ + EA +F MSR + G
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P Y I++ FC N + A+++ DEM ARG + Y+T +N LC + DA
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADML 489
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ-------KIDKLRKTPLVD 327
F EM++ G+ P F+ L + +G + A+ L + K DK+ L+D
Sbjct: 490 FNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 130/293 (44%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + N +++ LCK R E M+ + DI +Y L+ + ++ +
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEA 311
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ G EP +++Y ++ C +YD A ++ EM P+ + TL+
Sbjct: 312 FQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVE 371
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + EA + F + +RG P+ ++++++G + + A EM + GI P+
Sbjct: 372 ICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPD 431
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y I++ + G +A + M + G V TY + C A ++
Sbjct: 432 NVIYTILIDGFCRNGALSDALKMRDEMLAR-GCFMDVVTYNTFLNGLCKKKMFADADMLF 490
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+EM RG++P + ++TLI C + +D A F+ M+ ++P ++ L
Sbjct: 491 NEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 105/214 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + LK + +N LID CK+ + RA+E++D M ++ PD SY +L G+
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +M + G P++V+ +I +C + +A E +M + P + T
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G E L +A + +KRG + TYN ++ +C ++ +A +++ +M + G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
I P+ TY +++ + +EA+ M ++
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L N LI C+S + +A E KM PD SY L++G+ ++ NL
Sbjct: 602 GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM+ G + ++++Y +++N C+ + EA ++ R+M P + +LING
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPE 149
S+ + EA +F + +RG P+
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLVPD 746
>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Brachypodium distachyon]
Length = 560
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 143/296 (48%), Gaps = 1/296 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN I +C+ V++A E+ ++M + PD + IL+ G + K + EV R +
Sbjct: 230 SFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRL 289
Query: 72 KDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
+ DG P+VV+Y +I+ +C + R ++A+ ++ +M P+ + LING G
Sbjct: 290 QRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGN 349
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ A+ + Q R P+ T++ ++ YC +++DA R EM + I PN T+ I
Sbjct: 350 MGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSI 409
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ K R+ EA K ++ + P V+ + C +VD A I EM+ +
Sbjct: 410 IILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGK 469
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
G P + Y+ LI C + ++ +A +F +M+D G P ++ L GM
Sbjct: 470 GCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGM 525
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-PDIKSYTILLEGWGQQK 59
M +FG + N L+ LC+ + V R +EV ++++ P++ +YT ++ G+ +
Sbjct: 254 MAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTSVISGYCKSG 313
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ VY +M G P+ V+Y ++IN + A AV ++++M C P F
Sbjct: 314 RMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFS 373
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-K 178
TLI+G +L +A++ + + + +P A T++ ++ ++C R +A R + E+ +
Sbjct: 374 TLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMR 433
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P + V+ L K G+ +EA + M K G P TY I++ C ++
Sbjct: 434 TDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGK-GCRPDKYTYTILIIGHCMKGRIS 492
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSL 266
A+ +++M G P ++ I L
Sbjct: 493 EAITFFNKMVDTGCSPDSITVNSFIGCL 520
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 36/236 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I CKS +E A V++ M P+ +Y +L+ G+G+ N+ S VY++M
Sbjct: 302 YTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMI 361
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDVV++ +I+ +C + D+A+ + EM +P+ H F +I + R +
Sbjct: 362 LRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSA 421
Query: 133 EALQFFGQSKKR------------------------------------GFEPEAPTYNAV 156
EAL+F + R G P+ TY +
Sbjct: 422 EALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTIL 481
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
+ +C RI++A ++M G P++ T + + L+KAG E + K S
Sbjct: 482 IIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIMKIAS 537
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 105/257 (40%), Gaps = 2/257 (0%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKD-DGFEPDVVSYGIMINAHCSAKRYDEAVE 101
P SY ++ Q +++ +M D G P+ + + +A D A
Sbjct: 119 PSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFLSFLAGSCANAGFLDAAAA 178
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF-GQSKKRGFEPEAPTYNAVVGAY 160
L + C + + L+N R+ +A+ F G + + P+ ++N +
Sbjct: 179 LLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGV 238
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C + A +++ M + G P+T T +I++ L + V +R+ R P
Sbjct: 239 CQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPN 298
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V TY V+ +C + +++ AM ++++M G P Y+ LIN + A +Q
Sbjct: 299 VVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQ 358
Query: 281 EMLDIGIRPPGQLFSNL 297
+M+ P FS L
Sbjct: 359 QMILRRCPPDVVTFSTL 375
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/267 (18%), Positives = 94/267 (35%), Gaps = 75/267 (28%)
Query: 132 SEALQFFG--QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGIGPNTR-- 186
S LQ F S + P A +Y V+ C S R DA ++ D+M + G PN R
Sbjct: 101 SSTLQLFSALHSSQLAIPPSAHSYRYVISMLCQSSRHTDALKLFDQMTDQSGHFPNARFL 160
Query: 187 ---------------------------------TYDIVLHHLIKAGRTEEAYSVFKRMSR 213
Y+ +++ I GR ++A ++F+ +
Sbjct: 161 SFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYNKLMNSFIGCGRVQDAVALFEGWIQ 220
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG---------------------- 251
P V ++ + ++ C V A+ + + M G
Sbjct: 221 GGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVS 280
Query: 252 --------------VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+P + Y+++I+ C +++DA + +M+ G P ++ L
Sbjct: 281 RGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVL 340
Query: 298 KQALRDEGMEETAVVLAQKIDKLRKTP 324
G +AV + Q++ LR+ P
Sbjct: 341 INGYGKAGNMGSAVAVYQQM-ILRRCP 366
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 145/286 (50%), Gaps = 5/286 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G + +L F L+ +LC+ +HVE A+ +F + KK F KS+ I+L GW + +L
Sbjct: 210 YGFELDLVGFQILLMSLCRYKHVEEAEALF-REKKDEFPHVTKSWNIILNGWCVKGSLRD 268
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ ++ E D+ ++G INA R AV+LF++M P I +I+
Sbjct: 269 AQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINPDVAICNCIID 328
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +K++ EAL+ FG+ R + + TYN ++ C R+ Y ++D+M G P
Sbjct: 329 QLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCSP 388
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N RTY +L + ++ ++ +RM R G + Y +++ ++ +I
Sbjct: 389 NNRTYSYILK---TTEKPKDVIALMQRMERS-GCKLDSDMYNLILNLYIKWKYEKGMQQI 444
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
WDEM+ RG P ++ +++ L + KLD+A +Y+ M G+ P
Sbjct: 445 WDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIP 490
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+ ++ +N LI +CK + +E+ E+ D M+ + P+ ++Y+ +L+ + K+++++
Sbjct: 352 QADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCSPNNRTYSYILKTTEKPKDVIAL-- 409
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M+ G + D Y +++N + K +++ EME P F +++GL
Sbjct: 410 -MQRMERSGCKLDSDMYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLH 468
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPT 152
S+ +L EALQ++ K RG PE T
Sbjct: 469 SQGKLDEALQYYTTMKSRGMIPEPRT 494
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K + +N +++ K ++ + Q+++D+M++R PD +S+TI++ G Q
Sbjct: 413 MERSGCKLDSDMYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGK 472
Query: 61 LLSMNEVYREMKDDGFEPD 79
L + Y MK G P+
Sbjct: 473 LDEALQYYTTMKSRGMIPE 491
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 161/339 (47%), Gaps = 36/339 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + + L+D L + + + + VFD++K++ D+ Y+ ++ + + N
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EV+ E +G EP+ +YG +IN C + + A L +M+ + IF T
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + +AL+ ++ G + + TYN + C R+ DA +++ M + G
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373
Query: 181 IG-----------------------------------PNTRTYDIVLHHLIKAGRTEEAY 205
+ P+ TY++++ IK+G EA
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAE 433
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
FK+ K G P V TY +V C N +VD+A+R+++EMK RG P + Y+ LI+
Sbjct: 434 R-FKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISG 492
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
L E + ++A +++ ML G+ P L+S L +L +
Sbjct: 493 LAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTD 531
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 129/274 (47%), Gaps = 1/274 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++D CK+ ++ A+ + D+M + + Y LL+ + +QKN + EV +EM+ G
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
EP V +Y I+++ +A + +F E++ N + + +IN + A
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRAS 258
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + G EP TY A++ +C +I A ++ +M+ G+G N ++ ++
Sbjct: 259 EVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY 318
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ G ++A + M R G + V TY + C +++ A ++ M GV
Sbjct: 319 CRHGMVDKALEIKAVMERM-GIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESN 377
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
Y+TLI+ E + +A + F++M G RP
Sbjct: 378 YVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRP 411
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 120/259 (46%), Gaps = 1/259 (0%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
S +++++G+ + + + EM G + + Y +++ + K E+ +EM
Sbjct: 135 SASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEM 194
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
E+ +P+ + L++GL + +S+ F + K++ + Y+AV+ AYC + +
Sbjct: 195 ESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNV 254
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
A + DE GI PN RTY +++ K G+ E A + M + G +
Sbjct: 255 RRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLR-GVGHNQIIFNT 313
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ +C + VD A+ I M+ G+ ++ Y+TL LC ++++DA K M + G
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373
Query: 287 IRPPGQLFSNLKQALRDEG 305
+ ++ L EG
Sbjct: 374 VESNYVSYTTLISIHSKEG 392
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 101/203 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G++ ++ +N L LC+ +E A+++ M + + + SYT L+ ++ +
Sbjct: 334 MERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGD 393
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++R+M+ G P VV+Y +MI+ + + EA +EME P + +
Sbjct: 394 MVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAA 453
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ AL+ F + K+RG +P Y A++ R +A++ D M G
Sbjct: 454 LVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAG 513
Query: 181 IGPNTRTYDIVLHHLIKAGRTEE 203
+ P+ Y +++ L R +E
Sbjct: 514 LTPDDTLYSMLVGSLHTDKRKDE 536
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ + VV +C + R++DA R++DEM + G+ N Y+ +L + V K M
Sbjct: 135 SASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEM 194
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
G EPTV TY I+V + ++DE+K + V ++ YS +IN+ C
Sbjct: 195 -ESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ A + F E + GI P + + L G E A +L
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEML 295
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 4/224 (1%)
Query: 99 AVELFREMEAT--NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
A EL R+ A+ C +P +++G R+ +A + + + G + A YN +
Sbjct: 116 AAELLRKALASCPGCI-TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPL 174
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ Y ++ EM G+ P TY I++ L AG + SVF + RK
Sbjct: 175 LDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRK-N 233
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
V Y V+ +C V A ++DE G+ P Y LIN C +++ A
Sbjct: 234 VAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAE 293
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+M G+ +F+ + GM + A+ + ++++
Sbjct: 294 MLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERM 337
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 164/337 (48%), Gaps = 19/337 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++++I LC + VE+A +F +MK PD+ +YTIL++ + + +
Sbjct: 283 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 342
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM+ G P VV+Y +I+A+ AK+ +A ++F M C+P+ + L++G
Sbjct: 343 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 402
Query: 125 LGSEKRLSEALQ----------------FFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
L +S+A + +F + P TY A+V C + +++
Sbjct: 403 LCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDH 462
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-EIV 227
A+ ++D M G PN YD ++ KAG+ + A VF +M+ K G P+V TY ++
Sbjct: 463 AHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT-KCGYLPSVHTYTSLI 521
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
RMF + ++D+AM++ +M P + Y+ +I+ LC + + A K M + G
Sbjct: 522 DRMF-KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 580
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P ++ L L G + ++ L ++ + +P
Sbjct: 581 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 617
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 34/297 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID CK+ ++ AQEVF +M K + P + +YT L++ + L +V +M
Sbjct: 482 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D P+VV+Y MI+ C ++A++L ME C P+ + LI+GLG ++
Sbjct: 542 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKID 601
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA------------------YR--- 171
+L F Q ++G P TY ++ C + ++ A YR
Sbjct: 602 LSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAI 661
Query: 172 ------------MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+++EM G P Y +++ KAGR E A + K M P +
Sbjct: 662 QGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVK 721
Query: 220 TVS-TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
T + Y +++ C +QV+ A R++ EM RG +P + ++ LI L K D+A
Sbjct: 722 TDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 152/336 (45%), Gaps = 20/336 (5%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + +F R LC ++A ++ +M ++ F PD +Y+ ++ +
Sbjct: 253 KVNVANFAR---CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 309
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++EMK G PDV +Y I+I++ C A ++A LF EM + C P+ + LI+
Sbjct: 310 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 369
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG------ 180
K++ +A F + G P TY A+V C + I+ A+ + ++
Sbjct: 370 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 429
Query: 181 ----------IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ PN TY ++ L KA + + A+ + M G EP Y+ ++
Sbjct: 430 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM-LSSGCEPNHIVYDALIDG 488
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
FC ++D A ++ +M G LP +H Y++LI+ + + +LD A K +ML P
Sbjct: 489 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
++ + L G E A+ L +++ +P V
Sbjct: 549 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 584
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 150/302 (49%), Gaps = 5/302 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D+ L + + L+D LCK+ V+ A E+ D M +P+ Y L++G+ + +
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
S EV+ +M G+ P V +Y +I+ R D A+++ +M +C P+ + +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL +AL+ +++G P TY A++ + +I+ + + +M + G
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY ++++HL AG ++A + M ++ + Y ++ F + ++
Sbjct: 616 SPNYVTYRVLINHLCAAGLLDKARLLLGEM-KQTYWPKYLQGYRCAIQGF--SKSFIASL 672
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI--GIRPPGQLFSNLKQ 299
I +EM++ G +P+ +Y LI+ +L+ A + +EM+++ ++ ++++L Q
Sbjct: 673 GILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQ 732
Query: 300 AL 301
AL
Sbjct: 733 AL 734
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 139/344 (40%), Gaps = 51/344 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPD---IKSYTILLEGWGQ 57
+ FG + +N L+ L + V+ V +M + F D + + L G+
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ L M E ++D F+ D V MI+ A +DEA+ M +C P+
Sbjct: 91 WADALDMIE-----RED-FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TL++G +K+L + G P +N++V +YC AY++++ M
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 178 KCGIGPNTRTYDIVLHH-----------------------------------------LI 196
CG P Y+I + L
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
G+ ++A+ + K M RK G P STY V+ C+ +V+ A ++ EMK GV P +
Sbjct: 265 GVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ Y+ LI+S C ++ A F+EM +G P ++ L A
Sbjct: 324 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 367
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 145/370 (39%), Gaps = 56/370 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-WGQQK----NLLSMNE- 66
FN L+ + C + A ++ ++M P Y I + GQ+K +LL + E
Sbjct: 180 FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEK 239
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y EM + V+ C ++D+A +L +EM P + +I L
Sbjct: 240 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 299
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A F + K G P+ TY ++ ++C + I A + +EMR G P
Sbjct: 300 HATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV 359
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRM--------------------------------SRK 214
TY ++H +KA + +A +F RM ++
Sbjct: 360 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 419
Query: 215 PGTE------------------PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
GT P V TY +V C +VD A + D M + G P
Sbjct: 420 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 479
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
+Y LI+ C K+D A + F +M G P +++L + +G + A+ + +
Sbjct: 480 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 539
Query: 317 IDKLRKTPLV 326
+ K TP V
Sbjct: 540 MLKDSCTPNV 549
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 39/174 (22%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + LI+ LC + +++A+ + +MK+ + ++ Y ++G+ K+
Sbjct: 610 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKS 667
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMIN-------------------------------- 88
++ + EM+ G P YG++I+
Sbjct: 668 FIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMY 727
Query: 89 -----AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
A C A + +EA L+ EM P +F LI GL K+ EALQ
Sbjct: 728 ASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N LID C +E A +VF++M P++++YT L+ G+ + + L
Sbjct: 207 GFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRA 266
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M D G P+VV+Y +I CS + D A L + ME + P+ LI+
Sbjct: 267 MMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDA 326
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +R+ EA G ++G + Y +++ C + R A R+M + G P+
Sbjct: 327 LCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPD 386
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L + EA V M K G +P+ TY I++ D + +I
Sbjct: 387 AHTYSSLIDGLCRQKELSEAMLVLDDMMEK-GVQPSPVTYTIIIDELVREVGADGSKKIL 445
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D+M A G+ P + Y+ + S CHE +++DA M+D G+ P ++ L +
Sbjct: 446 DKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANL 505
Query: 305 GMEETA 310
G+ A
Sbjct: 506 GLTSQA 511
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 9/322 (2%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
+ L + LI+ C + + ++ + + F PD +YT + G+ + L +
Sbjct: 70 RNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRL 129
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ M G +Y +++ C A EA+ +F M+A C P PH++ T+++GL
Sbjct: 130 FVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCG 189
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
R EA + GFEP YNA++ YC + A + + M G PN RT
Sbjct: 190 AGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRT 249
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ K+ + + A +F RM G P V TY +++ C + Q+D A R+ M
Sbjct: 250 YTELISGFCKSRKLDRAMMLFSRMV-DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSM 308
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+ G++P S LI++LC +++ +A ++ GI+ ++++L L G
Sbjct: 309 ENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRF 368
Query: 308 ETAVVLAQKIDKLRKTPLVDRG 329
A D+L +T LV +G
Sbjct: 369 AAA-------DRLMQT-LVSQG 382
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 143/306 (46%), Gaps = 2/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ LC + V A VF M+ PD Y ++ G + +
Sbjct: 145 YTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAM 204
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+GFEP+VV Y +I+ +C+ + AV++F M+ C P+ + LI+G ++L
Sbjct: 205 AEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLD 264
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+ F + G P TY A++ C +++ AYR++ M G+ PN T +++
Sbjct: 265 RAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLI 324
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K R EA + + +K G + Y ++ C + A R+ + ++G
Sbjct: 325 DALCKHERVGEAQLLLGSLIQK-GIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGF 383
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP-PGQLFSNLKQALRDEGMEETAV 311
+P H YS+LI+ LC + +L +A +M++ G++P P + + +R+ G + +
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443
Query: 312 VLAQKI 317
+L + I
Sbjct: 444 ILDKMI 449
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 146/301 (48%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G + + LI CKSR ++RA +F +M P++ +YT L++G
Sbjct: 238 MDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQ 297
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + M++ G P+ + ++I+A C +R EA L + K + ++ +
Sbjct: 298 LDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTS 357
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL R + A + +GF P+A TY++++ C +++A ++D+M + G
Sbjct: 358 LIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG 417
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I++ L++ + + + +M G +P V TY I VR +C+ +++ A
Sbjct: 418 VQPSPVTYTIIIDELVREVGADGSKKILDKMI-AAGIKPDVFTYTIFVRSYCHEGRMEDA 476
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M GV P + Y+ LI + A F+ M+ G +P + ++ L +
Sbjct: 477 EHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRL 536
Query: 301 L 301
L
Sbjct: 537 L 537
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 135/309 (43%), Gaps = 52/309 (16%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + LID LCK+ A + + + F PD +Y+ L++G +QK L
Sbjct: 347 GIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEA 406
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V +M + G +P V+Y I+I+ EL RE+ A
Sbjct: 407 MLVLDDMMEKGVQPSPVTYTIIID------------ELVREVGAD--------------- 439
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
GS+K L + + G +P+ TY V +YC R+ DA MM M G+ PN
Sbjct: 440 -GSKKILDKMI-------AAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPN 491
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF----CYNAQVDMA 240
TY+ ++ G T +A+S FK M G +P +Y +++R+ N +
Sbjct: 492 LVTYNALICGYANLGLTSQAFSTFKHMVAN-GCKPNEESYTVLLRLLIKKESSNNIPANS 550
Query: 241 MRIWD--EMK-ARGVLPVM---------HMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+ IW EMK G+L M +Y+ + SLC D+LD+A EM +
Sbjct: 551 VSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLT 610
Query: 289 PPGQLFSNL 297
P +++++
Sbjct: 611 PSEDVYTSI 619
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 122/294 (41%), Gaps = 20/294 (6%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ LID LC+ + + A V D M ++ P +YTI+++ ++ +
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ +M G +PDV +Y I + ++C R ++A + M P+ + LI G
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYA 503
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVV---------------GAYCWSM-RINDAY 170
+ S+A F G +P +Y ++ W + + +
Sbjct: 504 NLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLH 563
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+++EM K + Y+ L L + R +EA + M + P+ Y ++
Sbjct: 564 GLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEM-QSANLTPSEDVYTSIIAC 622
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
C + A+ D M G +P + Y +I+SLC E + A + F +ML
Sbjct: 623 CCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLS 676
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 88/230 (38%), Gaps = 16/230 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW--GQQ 58
M G+ L +N LI +A F M P+ +SYT+LL +
Sbjct: 483 MVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKES 542
Query: 59 KNLLSMNEV--------------YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR 104
N + N V EM ++ Y + + C R DEA L
Sbjct: 543 SNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLI 602
Query: 105 EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
EM++ N PS ++ ++I K L+EAL F K G+ P+ +Y ++ + C
Sbjct: 603 EMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEG 662
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
I A ++ +M + I++ L++ G E S+ M K
Sbjct: 663 SIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEK 712
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/121 (18%), Positives = 52/121 (42%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I C+ + + A D M K + P ++SY ++ ++ ++ + +V+ +M
Sbjct: 616 YTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDML 675
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ + +++ I+I+ E L ME N +PS ++ L + +
Sbjct: 676 SKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQ 735
Query: 133 E 133
E
Sbjct: 736 E 736
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 42/84 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G +L + +I +LC+ ++ A++VF M + ++ + ++ IL++G Q+
Sbjct: 639 MVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGY 698
Query: 61 LLSMNEVYREMKDDGFEPDVVSYG 84
+ + + M++ + P Y
Sbjct: 699 VAECSSLLSVMEEKNYRPSDALYA 722
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 150/286 (52%), Gaps = 1/286 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LID CK V +A ++F++M+ + PD+ +Y +L++G+ + L +++ G
Sbjct: 222 LIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYG 281
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PDV+S+ +++ + CS R+ +A++L M C PS F LIN L + L +AL
Sbjct: 282 CQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKAL 341
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
K G P + ++N ++ +C I+ A ++ M G P+ TY+I+L L
Sbjct: 342 NVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTAL 401
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G+ ++A + ++S K G P++ +Y V+ + ++A+ + +EM +G+ P
Sbjct: 402 CKDGKVDDAVVILSQLSSK-GCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 460
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ ++++ L E K+ +A K+F + IRP +++++ L
Sbjct: 461 LITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGL 506
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 158/318 (49%), Gaps = 6/318 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++ G ++ +N LI CKS +E A V D+M P+ +Y +L +
Sbjct: 140 LEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMG---VSPNAATYDAVLCSLCDRGK 196
Query: 61 L-LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L +M + R+++ + PDVV+ ++I+A C +A++LF EM CKP +
Sbjct: 197 LKQAMQVLGRQLQSKCY-PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYN 255
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI G RL EA++F + G +P+ ++N ++ + C R DA +++ M +
Sbjct: 256 VLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRK 315
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ T++I+++ L + G +A +V + M K G P ++ +++ FC +D
Sbjct: 316 GCLPSVVTFNILINFLCQKGLLGKALNVLEMMP-KHGHTPNSRSFNPLIQGFCNGKGIDR 374
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ + M +RG P + Y+ L+ +LC + K+DDA ++ G P ++ +
Sbjct: 375 AIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVID 434
Query: 300 ALRDEGMEETAVVLAQKI 317
L G E AV L +++
Sbjct: 435 GLLKVGKAELAVELLEEM 452
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+D+ G+ ++ ++ +LC +++A +V + + + PD+ + T+L++ ++
Sbjct: 172 LDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESG 231
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM++ G +PDVV+Y ++I C R DEA+ +++ + C+P
Sbjct: 232 VGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNM 291
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ L S R +A++ ++G P T+N ++ C + A +++ M K G
Sbjct: 292 ILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHG 351
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+R+++ ++ + A + M + G P + TY I++ C + +VD A
Sbjct: 352 HTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR-GCYPDIVTYNILLTALCKDGKVDDA 410
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ I ++ ++G P + Y+T+I+ L K + A + +EM G++P +++
Sbjct: 411 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGG 470
Query: 301 LRDEG 305
L EG
Sbjct: 471 LSREG 475
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 144/309 (46%), Gaps = 4/309 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LI CK + A ++ +++ D+ SY +L+ G+ + + E R + G
Sbjct: 120 LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEI---EEALRVLDRMG 176
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P+ +Y ++ + C + +A+++ + C P LI+ E + +A+
Sbjct: 177 VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 236
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + + +G +P+ TYN ++ +C R+++A R + ++ G P+ +++++L L
Sbjct: 237 KLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSL 296
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
GR +A + M RK G P+V T+ I++ C + A+ + + M G P
Sbjct: 297 CSGGRWMDAMKLLATMLRK-GCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 355
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
++ LI C+ +D A +Y + M+ G P ++ L AL +G + AVV+
Sbjct: 356 SRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 415
Query: 316 KIDKLRKTP 324
++ +P
Sbjct: 416 QLSSKGCSP 424
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 125/253 (49%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI+ LC+ + +A V + M K P+ +S+ L++G+ K
Sbjct: 312 MLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKG 371
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E M G PD+V+Y I++ A C + D+AV + ++ + C PS + T
Sbjct: 372 IDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNT 431
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + A++ + +G +P+ T +VVG ++ +A + +++
Sbjct: 432 VIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFA 491
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN Y+ ++ L K+ +T A M K G +PT +TY +++ Y + A
Sbjct: 492 IRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAK-GCKPTEATYTTLIKGITYEGLAEDA 550
Query: 241 MRIWDEMKARGVL 253
++ +E+ +RG++
Sbjct: 551 SKLSNELYSRGLV 563
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +G + ++ N ++ +LC A ++ M ++ P + ++ IL+ Q+
Sbjct: 277 LPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGL 336
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V M G P+ S+ +I C+ K D A+E M + C P +
Sbjct: 337 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNI 396
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L + ++ +A+ Q +G P +YN V+ + A +++EM G
Sbjct: 397 LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG 456
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T V+ L + G+ EA F + R P Y ++ C + Q +A
Sbjct: 457 LKPDLITCTSVVGGLSREGKVREAMKFFHYLKR-FAIRPNAFIYNSIITGLCKSQQTSLA 515
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +M A+G P Y+TLI + +E +DA K E+ G+
Sbjct: 516 IDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGL 562
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L E +F +G P+ A++ +C R +A ++M + + G + +Y++
Sbjct: 95 LEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNV 154
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ K+G EEA V RM G P +TY+ V+ C ++ AM++
Sbjct: 155 LISGYCKSGEIEEALRVLDRM----GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQS 210
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
P + + LI++ C E + A K F EM + G +P ++ L + G + A
Sbjct: 211 KCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEA 270
Query: 311 VVLAQKI 317
+ +K+
Sbjct: 271 IRFLKKL 277
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 152/323 (47%), Gaps = 1/323 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
G++ + N +I+ LC+ + V V M K +P + + T L+ G Q N+
Sbjct: 104 SSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNV 163
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ M+ + DV +YG++IN C AVE R+ME N KP+ ++ T+
Sbjct: 164 AQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTI 223
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++GL + +SEAL + +G P TY ++ C R + ++DEM K G+
Sbjct: 224 MDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGM 283
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
+ +T +I++ K G+ +A SV M G P V TY ++ ++C +++ AM
Sbjct: 284 RLDLQTLNILVDAFCKEGKVMQAKSVIGFMIL-TGEGPDVFTYNSLIHIYCLQNKMNEAM 342
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
R++ M +RG LP + ++++LI+ C + ++ +EM +G P ++ L
Sbjct: 343 RVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGF 402
Query: 302 RDEGMEETAVVLAQKIDKLRKTP 324
G A L + K + P
Sbjct: 403 CQAGRPLAAKELFLNMHKYGQVP 425
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 148/319 (46%), Gaps = 1/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL+ + LI+ LC +V +A + D M+K R+ D+ +Y +L+ G + +
Sbjct: 138 MFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGD 197
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ E R+M++ ++P+VV Y +++ C EA+ L EM +P+ +
Sbjct: 198 TLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYAC 257
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL + R E + K G + T N +V A+C ++ A ++ M G
Sbjct: 258 LIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTG 317
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
GP+ TY+ ++H + EA VF M + G P + + ++ +C + ++
Sbjct: 318 EGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSR-GCLPDIVVFTSLIHGWCKDKNINKV 376
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M + +EM G +P + ++TLI C + A + F M G P Q + +
Sbjct: 377 MHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDG 436
Query: 301 LRDEGMEETAVVLAQKIDK 319
L + AV LA+ ++K
Sbjct: 437 LCKGNLLSEAVSLAEAMEK 455
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ L + LI LC + + D+M K D+++ IL++ + ++
Sbjct: 243 MSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGK 302
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ V M G PDV +Y +I+ +C + +EA+ +F M + C P +F +
Sbjct: 303 VMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTS 362
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +K +++ + + K GF P+ T+ ++G +C + R A + M K G
Sbjct: 363 LIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYG 422
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN +T ++L L K EA S+ + M K + + Y I++ C +++ A
Sbjct: 423 QVPNLQTCAVILDGLCKGNLLSEAVSLAEAM-EKSNLDLNIVIYSILLDGMCSAGKLNAA 481
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +G+ ++ Y+ +I LC + LD A M + G P ++ Q
Sbjct: 482 WELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQG 541
Query: 301 L 301
L
Sbjct: 542 L 542
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 122/286 (42%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ +L N L+D CK V +A+ V M PD+ +Y L+ + Q
Sbjct: 278 MIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNK 337
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ M G PD+V + +I+ C K ++ + L EM P + T
Sbjct: 338 MNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTT 397
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G R A + F K G P T ++ C +++A + + M K
Sbjct: 398 LIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSN 457
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N Y I+L + AG+ A+ +F + K G + V TY I+++ C +D A
Sbjct: 458 LDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGK-GLQINVYTYTIMIKGLCKQGSLDKA 516
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+ M+ G LP Y+ + L + ++ + KY M D G
Sbjct: 517 EDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 103/258 (39%), Gaps = 39/258 (15%)
Query: 93 AKRYDEAVELFREMEATNCKPS------------------------PHIFCTL------- 121
K DEA++LF+ M + PS HIF +L
Sbjct: 54 VKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTI 113
Query: 122 -----INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
IN L K ++ G K G EP T A++ C + A ++D M
Sbjct: 114 TLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHM 173
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
K + TY ++++ L K G T A ++M + +P V Y ++ C +
Sbjct: 174 EKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEER-NWKPNVVVYSTIMDGLCKDGL 232
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
V A+ + EM +GV P + Y+ LI LC+ + + EM+ +G+R Q +
Sbjct: 233 VSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNI 292
Query: 297 LKQALRDEG--MEETAVV 312
L A EG M+ +V+
Sbjct: 293 LVDAFCKEGKVMQAKSVI 310
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G L ++D LCK + A + + M+K D +I Y+ILL+G
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGK 477
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E++ + G + +V +Y IMI C D+A +L ME C P +
Sbjct: 478 LNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNV 537
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+ GL ++K ++ ++++ + +GF +A T
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAAT 569
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 88/195 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G ++ + LI C++ A+E+F M K P++++ ++L+G +
Sbjct: 383 MAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNL 442
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + M+ + ++V Y I+++ CSA + + A ELF + + + + +
Sbjct: 443 LSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTI 502
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL + L +A ++ G P+ TYN V I + + + MR G
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562
Query: 181 IGPNTRTYDIVLHHL 195
+ T +I +++L
Sbjct: 563 FSVDAATTEITINYL 577
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 169/331 (51%), Gaps = 9/331 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERA----QEVFDKMKKRRFD--PDIKSYTILLEG 54
M K G + + LI LC ++ A QE+ + F+ P++ SY+I+++G
Sbjct: 187 MQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDG 246
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ N ++ EM D G +P+VV++ ++I+ C + +A +L M P+
Sbjct: 247 LCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPN 306
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +LI G L+ A + F +G+EP+ +YN ++ YC ++++ +A ++ +
Sbjct: 307 LFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFN 366
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT-VSTYEIVVRMFCY 233
EM G+ P+ +T ++L L AG+ ++A +F+ + KP P + I + C
Sbjct: 367 EMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVI--KPYAMPKDLCICCIFLDGLCK 424
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
N + AM++++E+++ + + + LI+ LC KL+ A + F+++ + GI+P
Sbjct: 425 NGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMA 484
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+S++ +G + A +L QK+++ +P
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENGCSP 515
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 152/305 (49%), Gaps = 2/305 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + F+ LID LCK V +A+++ + M + P++ +YT L++G+ +L S
Sbjct: 267 GVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSA 326
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G+EPDV+SY ++IN +C + +EA++LF EM P L+
Sbjct: 327 KELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKA 386
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ +A + F K + + C + I +A ++ +E+ + +
Sbjct: 387 LFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLD 446
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ ++ L KAG+ E A+ +F+++ + G +P Y ++ FC QVD A ++
Sbjct: 447 IETFGCLIDGLCKAGKLETAWELFEKLYEE-GIQPDAMAYSSMIHGFCKKGQVDKANILF 505
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RD 303
+M+ G P + YS L+ +KL+ + M++ + P +++ ++ + +D
Sbjct: 506 QKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKD 565
Query: 304 EGMEE 308
E +E
Sbjct: 566 EKYKE 570
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 139/282 (49%), Gaps = 7/282 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +L N LI+ LC + + +R + PD+ ++T L++G + ++
Sbjct: 121 GLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEA 180
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------EATNCKPSPHIF 118
+++ M+ G P+VV+YG +I C+ + A++ +EM NC+P+ +
Sbjct: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISY 240
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+GL EA+ F + +G +P T++ ++ C ++ A ++++ M +
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ 300
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
GI PN TY ++ G A +F M K G EP V +Y +++ +C +V+
Sbjct: 301 IGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSK-GYEPDVISYNMLINGYCKTLKVE 359
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
AM++++EM G+ P + L+ +L K+DDA + F+
Sbjct: 360 EAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFR 401
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 14/277 (5%)
Query: 21 CK--SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
CK S V +A + FD M + F S+ LL G + ++ + +Y++M G P
Sbjct: 70 CKTGSISVTQAHQFFDLMMRSIF-----SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
D+++ I+IN C+ R +E + + P F TLI GL E R+ EA + F
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK------CGIGPNTRTYDIVL 192
+ +K G P TY ++ C IN A + EM PN +Y I++
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K G EEA +F M + G +P V T+ +++ M C QV A ++ + M G+
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQ-GVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGI 303
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+P + Y++LI C L+ A + F M G P
Sbjct: 304 VPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEP 340
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 147/317 (46%), Gaps = 25/317 (7%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ----QKNLLSMNEV 67
FNRL+ L K H + ++ +M PD+ + IL+ + L +M +
Sbjct: 93 SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
R G+ PDVV++ +I C R EA +LF M+ C P+ + TLI GL +
Sbjct: 153 MRR----GYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCA 208
Query: 128 EKRLSEALQF----FGQSKKRGFE--PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++ AL++ + F P +Y+ ++ C +A + +EM G+
Sbjct: 209 LGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGV 268
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN T+ +++ L K G+ +A + + M + G P + TY +++ FC ++ A
Sbjct: 269 QPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ-IGIVPNLFTYTSLIKGFCLVGDLNSAK 327
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ M ++G P + Y+ LIN C K+++A K F EML +G+ P +
Sbjct: 328 ELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPD----------V 377
Query: 302 RDEGMEETAVVLAQKID 318
+ G+ A+ LA K+D
Sbjct: 378 KTSGVLLKALFLAGKVD 394
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 144/285 (50%), Gaps = 8/285 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ L + LI C + A+E+F M + ++PD+ SY +L+ G+ +
Sbjct: 298 MIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLK 357
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G PDV + G+++ A A + D+A ELFR ++ I C
Sbjct: 358 VEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCI 417
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++GL + EA++ F + + + + T+ ++ C + ++ A+ + +++ + G
Sbjct: 418 FLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ Y ++H K G+ ++A +F++M G P + TY I++R F + +++
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEEN-GCSPDLITYSILMRGFYESNKLEKV 536
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+++ M + V P +Y+ + + +C ++K ++E LD+
Sbjct: 537 VQLLHRMIEKDVWPDDGIYAIVEDMVCKDEK-------YKEWLDL 574
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/241 (18%), Positives = 106/241 (43%), Gaps = 35/241 (14%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL------------ 52
G + ++ +N LI+ CK+ VE A ++F++M PD+K+ +LL
Sbjct: 337 GYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDA 396
Query: 53 -----------------------EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINA 89
+G + + +++ E++ + D+ ++G +I+
Sbjct: 397 KELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDG 456
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C A + + A ELF ++ +P + ++I+G + ++ +A F + ++ G P+
Sbjct: 457 LCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPD 516
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
TY+ ++ + S ++ +++ M + + P+ Y IV + K + +E + +
Sbjct: 517 LITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQ 576
Query: 210 R 210
R
Sbjct: 577 R 577
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
S+ + A++ D M + + +++ +L L K + +S++K+M G P +
Sbjct: 74 SISVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQM-HLAGLWPDLL 127
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
T I++ C +++ + + RG +P + ++TLI LC E ++ +A K F M
Sbjct: 128 TLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRM 187
Query: 283 LDIGIRPPGQLFSNLKQALRDEG 305
+G P + L + L G
Sbjct: 188 QKLGCTPNVVTYGTLIKGLCALG 210
>gi|18491213|gb|AAL69509.1| unknown protein [Arabidopsis thaliana]
Length = 320
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 155/292 (53%), Gaps = 8/292 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEV-FDK-MKKRRFD-PDIKSYTILLEGWGQ 57
+D F L+ E +N L+D LC+ +HV A+E+ F K + F + K + ++L GW +
Sbjct: 15 LDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSK 73
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
E +++M +G D+ SY I ++ C + + +AV+L++EM++ K
Sbjct: 74 LGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVA 133
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+I +G+ + + ++ F + ++RG EP T+N ++ C R+ DAYRM+DEM
Sbjct: 134 YNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMP 193
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K G P++ TY + L K E S+F RM R G P + TY +++R F +
Sbjct: 194 KRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIR-SGVRPKMDTYVMLMRKFERWGFL 249
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +W MK G P Y+ +I++L + LD A +Y +EM++ G+ P
Sbjct: 250 QPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 301
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG---PNTRT 187
+ EA+ + + E YN +V A C + +A + G G NT+
Sbjct: 5 VQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKI 63
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++++L K G + +K+M + G + +Y I + + C + + A++++ EM
Sbjct: 64 HNLILRGWSKLGWWGKCKEYWKKMDTE-GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEM 122
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
K+R + + Y+T+I ++ ++ + F+EM + G P + + + L ++G
Sbjct: 123 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDG 180
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 159/346 (45%), Gaps = 17/346 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL ++ LID+ C+ ++ A DKM K + + Y L+ G+ + N
Sbjct: 218 MGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGN 277
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM D G P VV+Y +I+ +C+ + +A +++ EM A P+ + F
Sbjct: 278 ASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTA 337
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL ++EA++ FG+ K+R P TYN ++ +C S I++A+ ++DEM G
Sbjct: 338 IISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKG 397
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T TY ++ L GR EA + K + Y +V +C + A
Sbjct: 398 FVPDTYTYRPLISGLCSVGRVSEAKEFVDDL-HKDHHKLNNMCYSALVHGYCKEGRFKDA 456
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS----- 295
+ M RGV + Y+ LI+ E +EM + G+RP +++
Sbjct: 457 VSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDR 516
Query: 296 -----NLKQA------LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
NLK+A + DEG V I+ L K L+D+ +
Sbjct: 517 HSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAE 562
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 143/305 (46%), Gaps = 10/305 (3%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + +N LI LCKSR + A E+ + + ++ + ++ +Y G + LL
Sbjct: 163 KLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY----GKFNEAELL---- 214
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++EM + G + ++Y I+I++ C D A+ +M + + + + + +LING
Sbjct: 215 -FKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYC 273
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
S A +F + +G P TY +++ YC + A+++ +EM GI PNT
Sbjct: 274 KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T+ ++ L +A EA +F M + P+ TY +++ C + + A + DE
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERK-IMPSEVTYNVMIEGHCRSGNISEAFHLLDE 392
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M +G +P + Y LI+ LC ++ +A ++ ++ + +S L EG
Sbjct: 393 MVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGR 452
Query: 307 EETAV 311
+ AV
Sbjct: 453 FKDAV 457
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 135/318 (42%), Gaps = 9/318 (2%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D+ K +PD + LI LC V A+E D + K + Y+ L+ G+ +
Sbjct: 390 LDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCK 449
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD--EAVELFREMEATNCKPSP 115
+ R M + G D+V Y I+I+ +A+ +D L +EM +P
Sbjct: 450 EGRFKDAVSACRVMVERGVAMDLVCYAILIDG--TAREHDTRALFGLLKEMHNHGLRPDA 507
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
I+ +I+ L EA + G P TY A++ C + ++ A + E
Sbjct: 508 VIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKE 567
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
+ PN TY L HL + G E+A + M + G T +Y I++R FC
Sbjct: 568 TLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK--GFLATTVSYNILIRGFCRLG 625
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+++ A ++ M +LP YST+I C L +A K + MLD G++P +S
Sbjct: 626 KIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYS 685
Query: 296 NLKQALRDEGMEETAVVL 313
L G E A L
Sbjct: 686 FLVHGCCIAGELEKAFEL 703
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 10/289 (3%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
MK P++++ + LL G + + + ++ ++ +PD+ Y ++ + C K
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+++A E+ ME CK S ++ LI+GL +R+ EAL+ ++G E TY
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
+ N+A + EM + G+ N TY I++ + G + A +M+ K
Sbjct: 207 ---------KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMT-KA 256
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
E TV Y ++ +C A +DEM +G+ P + Y++LI+ C+E + A
Sbjct: 257 SIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKA 316
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
K + EM GI P F+ + L M A+ L ++ + + P
Sbjct: 317 FKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMP 365
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 133/289 (46%), Gaps = 10/289 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M L E+ + L++ L + R +FD + PDI Y+ ++ + K+
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ M+ + + +V Y ++I+ C ++R EA+E+ NC +
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEI------KNCLMQKGLEAN 200
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ G + +EA F + ++G TY+ ++ ++C +++A +D+M K
Sbjct: 201 VVTYYG---KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I Y+ +++ K G A F M K G PTV TY ++ +C + A
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDK-GLTPTVVTYTSLISGYCNEGEWHKA 316
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++++EM A+G+ P + ++ +I+ LC + + +A + F EM + I P
Sbjct: 317 FKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMP 365
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 120/276 (43%), Gaps = 2/276 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L+ CK + A M +R D+ Y IL++G ++ + ++ + +EM
Sbjct: 440 YSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMH 499
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G PD V Y MI+ H A EA L+ M C P+ + LINGL +
Sbjct: 500 NHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMD 559
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A ++ P TY + + A ++ M K G T +Y+I++
Sbjct: 560 KAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILI 618
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G+ EEA + M+ P TY ++ C + + A+++W M +G+
Sbjct: 619 RGFCRLGKIEEATKLLHGMTDND-ILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGL 677
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
P YS L++ C +L+ A + EM+ G+R
Sbjct: 678 KPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMR 713
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 98/245 (40%), Gaps = 36/245 (14%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L + LID + + +M PD YT +++ + NL
Sbjct: 467 GVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEA 526
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M D+G P+VV+Y +IN C A D+A L +E ++ P+ + ++
Sbjct: 527 FGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDH 586
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-------- 176
L + +A+Q + +GF +YN ++ +C +I +A +++ M
Sbjct: 587 LTRGGNMEKAVQLH-HAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPD 645
Query: 177 ---------RKC------------------GIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+C G+ P+T Y ++H AG E+A+ +
Sbjct: 646 YITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRD 705
Query: 210 RMSRK 214
M R+
Sbjct: 706 EMIRR 710
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 1/183 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ LCK+ +++A+ + + P+ +Y L+ + N+
Sbjct: 537 GCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKA 596
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M GF VSY I+I C + +EA +L M + P + T+I
Sbjct: 597 VQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYE 655
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L EA++ + +G +P+ Y+ +V C + + A+ + DEM + G+ N
Sbjct: 656 QCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSN 715
Query: 185 TRT 187
T
Sbjct: 716 HVT 718
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 151/299 (50%), Gaps = 1/299 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I LC+ + A+ +FD MK+ P+ +Y +L+ G Q ++ S +Y+E+
Sbjct: 216 YTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELL 275
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+ V + +I+ C AKR+ EA ++FR+M P+ ++ +L++G
Sbjct: 276 NSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQ 335
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL + + + G P+ T + VV C +I A R ++ +R+ G+ N Y+ ++
Sbjct: 336 EALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALI 395
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G EEA + RM+ + G EP V +Y ++ ++ +AM I+ EM A+G+
Sbjct: 396 DEYCRNGNLEEALATCTRMT-EVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGI 454
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + Y+ LI+ +D A ++ +EM++ GI P S L L E + AV
Sbjct: 455 EPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAV 513
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 142/304 (46%), Gaps = 1/304 (0%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
LP N ++D L K+R A E+FD+M +R P + +Y L+ Q + E++
Sbjct: 143 LPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWD 202
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M +P+V++Y MI C +A LF M+ +P+ + + L++G
Sbjct: 203 QMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGD 262
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ A + + G P A + ++ +C + R ++A M +M + G+ P Y+
Sbjct: 263 DVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYN 322
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ ++G +EA S+++ M+R G P T IVVR C Q+ +A R + ++
Sbjct: 323 SLMDGAFRSGDAQEALSLYQEMTRL-GLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVRE 381
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
GV Y+ LI+ C L++A M ++G+ P +S+L G +
Sbjct: 382 DGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQI 441
Query: 310 AVVL 313
A+ +
Sbjct: 442 AMAI 445
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + ++ LID K ++ A ++ +M + +P++ +YT L+ G +
Sbjct: 414 MTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGG 473
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE--------------- 105
+ + ++EM ++G P+ ++ ++++ C R +AV E
Sbjct: 474 IDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSN 533
Query: 106 --MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
E P+ I+ TLI GL + + EA + F +K G ++ TY ++ C
Sbjct: 534 FTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCML 593
Query: 164 MRINDAYRMMDEMRKCGIGP 183
+ +A + +M K G+ P
Sbjct: 594 GYVLNAMMLYADMMKIGVKP 613
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 161/332 (48%), Gaps = 13/332 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+G+ + + +I CK +V A ++FD+M++++ PDI +YT ++ G +
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ E++ EM G EPD V+Y +I+ +C A EA + +M P+ +
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L +GL + A + + ++G +P TYN +V C I ++M+EM G
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T TY ++ K G +A+ + + M K +PT+ T+ +++ FC + ++
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNK-RLQPTLVTFNVLMNGFCMSGMLEDG 576
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS----- 295
R+ + M +G++P +++L+ C ++ + + ++ M D G+ P ++
Sbjct: 577 ERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKG 636
Query: 296 -----NLKQA--LRDEGMEETAVVLAQKIDKL 320
N+K+A L E +E+ V A D L
Sbjct: 637 HCKARNMKEAWFLHKEMVEKGYSVTAATYDAL 668
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 146/307 (47%), Gaps = 2/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + +N +I LCK+ V A+++ M+K PD YT ++ G+ + N+ +
Sbjct: 307 GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAA 366
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ EM+ PD+V+Y +I+ C + + EA E+F EM +P + LI+G
Sbjct: 367 CKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EA Q ++G P TY A+ C + I+ A ++ EM + G+ PN
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPN 486
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ L K G E+ + + M G P TY ++ +C ++ A +
Sbjct: 487 VYTYNTIVNGLCKIGNIEQTVKLMEEMDLA-GFYPDTITYTTLMDAYCKMGEMAKAHELL 545
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-KQALRD 303
M + + P + ++ L+N C L+D + + ML+ GI P F++L KQ
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605
Query: 304 EGMEETA 310
M T
Sbjct: 606 NNMRATT 612
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 1/287 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N ++ LC+ V A + +M R PD+ SY +++ G+ + L + ++ E+K
Sbjct: 246 NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKG 305
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G +PD Y +I C EA +L R M P ++ T+I+G +S
Sbjct: 306 KGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + F + +++ P+ TY +V+ C S ++ +A M +EM G+ P+ TY ++
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
KAG +EA+SV +M +K G P V TY + C N ++D+A + EM +G+
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQK-GLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ 484
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
P ++ Y+T++N LC ++ K +EM G P ++ L A
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + + LID CK+ ++ A V ++M ++ P++ +YT L +G + +
Sbjct: 412 GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVA 471
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
NE+ EM G +P+V +Y ++N C ++ V+L EM+ P + TL++
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+++A + + +P T+N ++ +C S + D R+++ M + GI PN
Sbjct: 532 YCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ ++K M + G P +TY I+++ C + A +
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMHDR-GVMPDSNTYNILIKGHCKARNMKEAWFLH 650
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM +G Y LI K +A K F+EM G+ ++ +E
Sbjct: 651 KEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEE 710
Query: 305 GMEETAVVL 313
G E + L
Sbjct: 711 GNWEITLEL 719
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 153/317 (48%), Gaps = 2/317 (0%)
Query: 3 KFGLKQELPDFNRLIDTL-CKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
++G+ + N + L C ++ A +VF++ + + S I+L Q +
Sbjct: 199 RYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKV 258
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ + +M D G PDVVSYG++++ +C D+ ++L E++ KP +I+ +
Sbjct: 259 REAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNI 318
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I L + EA Q +K G P+ Y V+ +C ++ A ++ DEMR+ I
Sbjct: 319 ILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKI 378
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY V+H + K+G+ EA +F M K G EP TY ++ +C ++ A
Sbjct: 379 VPDIVTYTSVIHGICKSGKMVEAREMFNEMLVK-GLEPDEVTYTALIDGYCKAGEMKEAF 437
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ ++M +G+ P + Y+ L + LC ++D A + EM G++P ++ + L
Sbjct: 438 SVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGL 497
Query: 302 RDEGMEETAVVLAQKID 318
G E V L +++D
Sbjct: 498 CKIGNIEQTVKLMEEMD 514
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 116/247 (46%), Gaps = 1/247 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + +N +++ LCK ++E+ ++ ++M F PD +YT L++ + +
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E+ R M + +P +V++ +++N C + ++ L M P+ F +
Sbjct: 538 MAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNS 597
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ + + + + RG P++ TYN ++ +C + + +A+ + EM + G
Sbjct: 598 LMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKG 657
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
TYD ++ K + EA +F+ M RK G Y+I V + ++
Sbjct: 658 YSVTAATYDALIRGFYKRKKFVEARKLFEEM-RKHGLVAEKDIYDIFVDVNYEEGNWEIT 716
Query: 241 MRIWDEM 247
+ + DE
Sbjct: 717 LELCDEF 723
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 134/308 (43%), Gaps = 2/308 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN-EVYREM 71
F+ L ++ V AQ++F K+ + + S + L + + +V+ E
Sbjct: 174 FDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEF 233
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G + VS I+++ C + EA L +M P + +++G L
Sbjct: 234 PELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGEL 293
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ L+ + K +G +P+ YN ++ C + + +A +++ MRK G+ P+ Y V
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTV 353
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ K G A +F M RK P + TY V+ C + ++ A +++EM +G
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRK-KIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ P Y+ LI+ C ++ +A +M+ G+ P ++ L L G + A
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472
Query: 312 VLAQKIDK 319
L ++ +
Sbjct: 473 ELLHEMSR 480
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 146/337 (43%), Gaps = 28/337 (8%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
D R + T K RH+E + V K + RF P + +L+ +L++ +
Sbjct: 49 DLVRRVTTTLKRRHLEPFRRVL-KPYESRFKPSHLIW-VLINLKNDYPLVLNLFNWAKSQ 106
Query: 72 KDDGFEPDVVSYGIMINAH----------------CSAKRYD--EAVELFREMEATNCK- 112
F P + S I+++ C+ + D ++ LF EM K
Sbjct: 107 SQQQFHPTLESLCIVVHLSVASNDIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKD 166
Query: 113 --PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY-CWSMRINDA 169
P +F L + EA + F + + G + N + C I A
Sbjct: 167 WGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIA 226
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
++ +E + G+ NT + +IVLH L + G+ EA+++ +M+ + G P V +Y +VV
Sbjct: 227 VKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDR-GNFPDVVSYGVVVS 285
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+C ++D +++ DE+K +G+ P ++Y+ +I LC ++ +A + + M G+ P
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+++ + G A L D++R+ +V
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKL---FDEMRRKKIV 379
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 163/326 (50%), Gaps = 2/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FGL + ++ L K ++ A+++ KM + + ++T+LL+G+ + +
Sbjct: 514 MLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGD 573
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ G PD +++ I+ A +EA E F EM P+ ++ +
Sbjct: 574 TAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNS 633
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + +L EAL+ + +++G P+ T N ++ +C R+ A+ EM G
Sbjct: 634 LIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIG 693
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T TY+ ++ K A +M G +P ++TY I ++ FC + ++ A
Sbjct: 694 VTPDTVTYNTLIGGYCKVLDMVSADEFLNKM-YASGWDPDITTYNIRIQGFCSSQKISRA 752
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + DE+ A GV+P Y+T++N++C D LD A ++L + P + L
Sbjct: 753 VTMLDELIAVGVVPNTVTYNTMMNAVC-TDMLDRAMVLTAKLLKMAFVPNVVTTNVLLSH 811
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
+GM E A++ QK++KL + +
Sbjct: 812 FCKQGMPEKALIWGQKLNKLLRADFI 837
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 156/367 (42%), Gaps = 71/367 (19%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K L F+ +I C +V A+++F+ +++ P++ Y L+ G+ + ++
Sbjct: 339 MIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARD 398
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ N +Y EM+D G PD ++ I++ + + ++ ELFR+ ++ P ++
Sbjct: 399 VCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDV 458
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY-------------------- 160
+ GL +L EA+QF ++G P +N+V+ AY
Sbjct: 459 SVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFG 518
Query: 161 -------CWSM--------RINDA----YRMMD--------------------------- 174
C SM R+ +A Y+M+D
Sbjct: 519 LVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAH 578
Query: 175 ----EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
EM GI P+ + + L KAG EEAY F MS+K G P Y ++
Sbjct: 579 SLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKK-GFVPNNFVYNSLIHG 637
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C ++ A+++ EM+ +G+LP + + +IN C E ++ A F EM IG+ P
Sbjct: 638 LCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPD 697
Query: 291 GQLFSNL 297
++ L
Sbjct: 698 TVTYNTL 704
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 123/244 (50%), Gaps = 2/244 (0%)
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
EPDV +Y I+INA+ R +A+ M CKPS F T+I +E + EA +
Sbjct: 310 EPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARK 369
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
F ++ G P YN ++ Y + + A + +EMR GI P+ T++I++
Sbjct: 370 IFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNY 429
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
K G+ ++Y +F+ S P S Y++ V C+ Q+D AM+ ++M +G+ P +
Sbjct: 430 KYGKEADSYELFRDWSLS-SLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSV 488
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQ 315
++++I + D+A K ++ ML G+ P S++ L +G ++E +L +
Sbjct: 489 VAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYK 548
Query: 316 KIDK 319
IDK
Sbjct: 549 MIDK 552
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 136/299 (45%), Gaps = 3/299 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N L+ S + E+ +M++ P + +IL + + S+ ++ R M
Sbjct: 211 LNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMI 270
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG P ++ IMI C A L M C+P + + LIN R S
Sbjct: 271 RDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTS 330
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL F K G +P T++ ++ A+C + +A ++ + +++ G+ PN Y+ ++
Sbjct: 331 DALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLM 390
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR-MFCYNAQVDMAMRIWDEMKARG 251
KA +A +++ M R G P +T+ I+V + Y + D + ++ +
Sbjct: 391 SGYFKARDVCQANMLYEEM-RDKGIAPDGATFNILVAGNYKYGKEAD-SYELFRDWSLSS 448
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
++P +Y + LC +LD+A ++ ++ML+ G+ P F+++ A G E+ A
Sbjct: 449 LVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNA 507
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 148/337 (43%), Gaps = 23/337 (6%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVY 68
+FN +I C+ ++ A+ + M K +PD+ +Y IL+ + G+ + L +
Sbjct: 280 NFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHL- 338
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
M +G +P ++++ +I A C+ EA ++F ++ P+ ++ TL++G
Sbjct: 339 --MIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKA 396
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ + +A + + + +G P+ T+N +V + D+Y + + + P+ Y
Sbjct: 397 RDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLY 456
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
D+ + L AG+ +EA + M K G P+V + V+ + D A + + M
Sbjct: 457 DVSVAGLCWAGQLDEAMQFLEDMLEK-GMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIML 515
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS------------- 295
G++P S+++ L + +L +A +M+D G+ F+
Sbjct: 516 MFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTA 575
Query: 296 ---NLKQALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
+L + G+ A+ + ID L K LV+
Sbjct: 576 GAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEA 612
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 123/289 (42%), Gaps = 4/289 (1%)
Query: 4 FGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ L +PD ++ + LC + ++ A + + M ++ P + ++ ++ + +
Sbjct: 444 WSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGF 503
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ Y+ M G P + M+ R EA +L +M + F
Sbjct: 504 EDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTV 563
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + A + + + RG P+A ++A + + + +AY EM K G
Sbjct: 564 LLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKG 623
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN Y+ ++H L G+ EA + + M R+ G P + T I++ FC ++ A
Sbjct: 624 FVPNNFVYNSLIHGLCNCGKLHEALKLEREM-RQKGLLPDIFTTNIIINGFCKEGRMKSA 682
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ EM GV P Y+TLI C + A ++ +M G P
Sbjct: 683 FDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDP 731
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + +E + N ++ + S ++ ++ MR+ G+ P++ I+ L++
Sbjct: 196 FMWANHHKYESDFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLR 255
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G + + + M R G P + I++ FC + +A + M P ++
Sbjct: 256 VGDYGSVWKLLRGMIRD-GPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVY 314
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
Y+ LIN+ + DA + M+ G +P FS + A +EG VV A+KI
Sbjct: 315 AYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEG----NVVEARKI 370
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I + A E+++ M + PD +Y+IL+ G + + S + REM+
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREME 373
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF P+VV+Y I++++ C +D+ L EM A + + +I L + R+
Sbjct: 374 KKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 433
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ + + +G P+ +YN ++ C + ++ +A M + + + G+ N TY+ ++
Sbjct: 434 EAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTII 493
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L++ GR ++A + K M G V +Y +++ C + VD ++ + +EM +G+
Sbjct: 494 HALLRDGRWQDAVRLAKEMILH-GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P Y+ LI+ LC E ++ DA + ++ML+ G+ P ++ L L G A+
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 612
Query: 313 LAQKI 317
L +K+
Sbjct: 613 LLEKL 617
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 156/314 (49%), Gaps = 5/314 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G ++ F+ ++ +C V A + D+M + P + +Y LL+G + +
Sbjct: 239 MGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQ--- 295
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ R M E +VV + +I + + EA EL+ M C+P H + L++
Sbjct: 296 -ADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMH 354
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL R+ A++ + +K+GF P TY V+ ++C + +D +++EM G+
Sbjct: 355 GLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL 414
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N++ Y+ +++ L K GR +EA + + M R G P + +Y ++ C N Q++ A +
Sbjct: 415 NSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 473
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++ + GV+ Y+T+I++L + + DA + +EM+ G ++ L +A+
Sbjct: 474 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 533
Query: 304 EGMEETAVVLAQKI 317
+G + ++VL +++
Sbjct: 534 DGNVDRSLVLLEEM 547
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 4/291 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
+ GLK PD ++ L+ LCK + A + +M+K+ F P++ +YTI+L + +
Sbjct: 335 ETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKN 394
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ EM G + Y MI A C R DEA+ L +EM + C P +
Sbjct: 395 GMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSY 454
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
T+I L + +++ EA F + G TYN ++ A R DA R+ EM
Sbjct: 455 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 514
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G + +Y+ ++ + K G + + + + M+ K G +P +Y I++ C +V
Sbjct: 515 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK-GIKPNNVSYNILISELCKERRVR 573
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A+ + +M +G+ P + Y+TLIN LC + A +++ + + P
Sbjct: 574 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHP 624
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 136/323 (42%), Gaps = 34/323 (10%)
Query: 28 RAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREM-KDDGFEPDVVSYGI 85
RA + D++ +R P +SY ++L + +YR M D P ++G+
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGV 180
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
A C R DEA+ L R M C P ++ T+I+ L + ++EA + G
Sbjct: 181 AARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMG 240
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA------- 198
+ T++ VV C R+ +A R++D M G P TY +L L +
Sbjct: 241 CAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEAR 300
Query: 199 ------------------------GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
G+ EA +++ M K G +P TY I++ C
Sbjct: 301 AMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK-GCQPDAHTYSILMHGLCKL 359
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
++ A+R+ EM+ +G P + Y+ +++S C DD +EM G+ Q +
Sbjct: 360 GRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419
Query: 295 SNLKQALRDEGMEETAVVLAQKI 317
+ + AL +G + A+ L Q++
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEM 442
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL +N +I LCK ++ A + +M+ + +PDI SY ++ +
Sbjct: 407 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 466
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + ++G + ++Y +I+A R+ +AV L +EM C +
Sbjct: 467 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 526
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + + + +L + ++G +P +YN ++ C R+ DA + +M G
Sbjct: 527 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 586
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ +++ L K G A ++ +++ + P + TY I++ C +D A
Sbjct: 587 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE-NVHPDIITYNILISWHCKVRLLDDA 645
Query: 241 MRIWDEMKARGVLPV 255
+ + A V PV
Sbjct: 646 AMLLNRAMA-AVCPV 659
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 150/314 (47%), Gaps = 4/314 (1%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKM---KKRRFDPDIKSYTILLEGWGQQKNLLS 63
KQ + FN +++ + + A + + + + F P++ +Y ++++ + +
Sbjct: 133 KQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDR 192
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ +REM PDV +Y ++N C +R DEAV L EM+A C P+P F LI+
Sbjct: 193 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLID 252
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L LS A + +G P TYN ++ C +++ A ++++M P
Sbjct: 253 ALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP 312
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY +++ L+K R E+ + M + G + Y ++ + + A+R+
Sbjct: 313 NQVTYGTIINGLVKQRRAEDGVHILMSMEER-GQKANEYIYSSLISGLFKEGKSENAVRL 371
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
W EM +G P + +Y I+ LC ++K D+A QEML G P +S+L +
Sbjct: 372 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 431
Query: 304 EGMEETAVVLAQKI 317
+G + A+++ +++
Sbjct: 432 KGDSQKAILVWKEM 445
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 145/336 (43%), Gaps = 36/336 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L +N +I LCK ++RA + F +M + +PD+ +Y+ L+ G +++ +
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM+ +G P+ V++ ++I+A A +L M C P+ + TLI+G
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +L +AL + P TY ++ R D ++ M + G N
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ L K G++E A ++K M+ K G +P V Y + C + + D A I
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEK-GCKPNVVVYGAFIDGLCRDEKPDEAEDIL 407
Query: 245 DEMKARGVLPVMHMYSTL-----------------------------------INSLCHE 269
EM ++G LP YS+L +N LC
Sbjct: 408 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 467
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+L +A + ML G++P +S++ + L D G
Sbjct: 468 GRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVG 503
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID L K+ + RA ++ D M + P+ +Y L+ G + L + +M
Sbjct: 247 FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV 306
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+ V+YG +IN +R ++ V + ME K + +I+ +LI+GL E +
Sbjct: 307 SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSE 366
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A++ + + ++G +P Y A + C + ++A ++ EM G PN TY ++
Sbjct: 367 NAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLM 426
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G +++A V+K M + V +++ C + ++ A+ +W M G+
Sbjct: 427 KGFFKKGDSQKAILVWKEMMSQ-DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGL 485
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P + YS++I LC +D K F EM
Sbjct: 486 KPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 114/290 (39%), Gaps = 41/290 (14%)
Query: 43 PDIKSYTI-------LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
P SY + L+E + + +++V MK +G + ++ A A
Sbjct: 56 PQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHL 115
Query: 96 YDEAVELFREMEA-TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
EAV F M +CK + F +++N + E S A +F Y
Sbjct: 116 PGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKF---------------YL 160
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
V GA G PN TY++++ L K G+ + A F+ M K
Sbjct: 161 HVFGA-----------------NSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLK 203
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
P V TY ++ C +VD A+ + DEM+A G LP ++ LI++L L
Sbjct: 204 -NCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSR 262
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
A K M G P ++ L L +G + A+ L +K+ + P
Sbjct: 263 AAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP 312
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 129/305 (42%), Gaps = 30/305 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K ++ LI L K E A ++ +M ++ P++ Y ++G + +
Sbjct: 340 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +EM GF P+ +Y ++ +A+ +++EM + + + +
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RK 178
L+NGL RL EAL + G +P+ Y++++ C ++ ++ EM ++
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 519
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-------------- 224
P+ TY+I+ + L + A + M + G +P T
Sbjct: 520 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDE-GCDPDSLTCNIFLETLRERINPP 578
Query: 225 --------EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH----EDKL 272
E+VVR+ ++ A+RI +EM R + P +S +I C + +
Sbjct: 579 QDGRLFLDELVVRLLKRERKLS-ALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 637
Query: 273 DDACK 277
D+ C+
Sbjct: 638 DECCR 642
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 39/218 (17%)
Query: 127 SEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++ LS + Q F + G ++ T+ ++ Y S + ++++D M++ G
Sbjct: 41 AQNELSISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTE 100
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRM---------------------------------- 211
+ ++ KA EA + F RM
Sbjct: 101 TIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYL 160
Query: 212 ----SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+ G +P + TY ++++ C Q+D A+ + EM + P + YSTL+N LC
Sbjct: 161 HVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLC 220
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
E ++D+A EM G P F+ L AL G
Sbjct: 221 KERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 258
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 152/314 (48%), Gaps = 4/314 (1%)
Query: 7 KQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+ ++PD LI CK +A + + ++ PD+ +Y +L+ G +
Sbjct: 113 RGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMD 172
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ +M G P VV++ I+IN C A+++ +M C P+ + L++
Sbjct: 173 AEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLH 232
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G EK++ A+++ G+ RG P+ TYN ++ A C +++ A +++++ G P
Sbjct: 233 GFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSP 292
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
TY+ V+ L K G+T++A + M R G +P + TY +V +VD A++
Sbjct: 293 VLITYNTVIDGLSKVGKTDQAAKLLDEM-RAKGLKPDIITYSSLVGGLSREGKVDEAIKF 351
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ +++ GV P Y+ ++ LC K D A + M+ G +P ++ L + L
Sbjct: 352 FHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAY 411
Query: 304 EGMEETAVVLAQKI 317
EG+ + A+ L ++
Sbjct: 412 EGLAKEALELLNEL 425
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 1/288 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N + L ++ +E + M R PDI T L+ G+ + + ++D
Sbjct: 88 NNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIED 147
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G PDV++Y ++I+ CS R+ +A +L +M C PS F LIN L + L
Sbjct: 148 SGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGR 207
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+ + K G P + +YN ++ +C ++ A + +M G P+ TY+ +L
Sbjct: 208 AIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K G+ + A + ++S K G P + TY V+ + D A ++ DEM+A+G+
Sbjct: 268 ALCKDGKVDAAVELLNQLSSK-GCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLK 326
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + YS+L+ L E K+D+A K+F ++ +G++P ++ + L
Sbjct: 327 PDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGL 374
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 131/253 (51%), Gaps = 1/253 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + FN LI+ LC+ + RA +V +KM K P+ SY LL G+ ++K
Sbjct: 180 MVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKK 239
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E +M G PD+V+Y ++ A C + D AVEL ++ + C P + T
Sbjct: 240 MERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 299
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL + +A + + + +G +P+ TY+++VG ++++A + ++ G
Sbjct: 300 VIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLG 359
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ ++ L KA +T+ A M ++ G +PT ++Y I++ Y A
Sbjct: 360 VKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQR-GCKPTEASYTILIEGLAYEGLAKEA 418
Query: 241 MRIWDEMKARGVL 253
+ + +E+ RGV+
Sbjct: 419 LELLNELCLRGVV 431
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 6/258 (2%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
VYR G PD++ +I C + +A + +E + P + LI+G+
Sbjct: 111 VYR-----GDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMC 165
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
S R +A + +RG P T+N ++ C + A ++++M K G PN+
Sbjct: 166 STGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSL 225
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y+ +LH K + E A +M+ + G P + TY ++ C + +VD A+ + ++
Sbjct: 226 SYNPLLHGFCKEKKMERAIEYLGKMTSR-GCYPDIVTYNTLLTALCKDGKVDAAVELLNQ 284
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
+ ++G PV+ Y+T+I+ L K D A K EM G++P +S+L L EG
Sbjct: 285 LSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGK 344
Query: 307 EETAVVLAQKIDKLRKTP 324
+ A+ ++ L P
Sbjct: 345 VDEAIKFFHDLEVLGVKP 362
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L L++ G EE + + M + G P + ++R FC + A RI + ++ G
Sbjct: 91 LSKLVRNGELEEGFRFLESMVYR-GDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSG 149
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+P + Y+ LI+ +C + DA K +M+ G P F+ L L +G+ A+
Sbjct: 150 AVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAI 209
Query: 312 VLAQKIDKLRKTP 324
+ +K+ K TP
Sbjct: 210 DVLEKMPKHGCTP 222
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 155/292 (53%), Gaps = 8/292 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEV-FDK-MKKRRFD-PDIKSYTILLEGWGQ 57
+D F L+ E +N L+D LC+ +HV A+E+ F K + F + K + ++L GW +
Sbjct: 143 LDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSK 201
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
E +++M +G D+ SY I ++ C + + +AV+L++EM++ K
Sbjct: 202 LGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVA 261
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+I +G+ + + ++ F + ++RG EP T+N ++ C R+ DAYRM+DEM
Sbjct: 262 YNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMP 321
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K G P++ TY + L K E S+F RM R G P + TY +++R F +
Sbjct: 322 KRGCQPDSITYMCLFSRLEKPS---EILSLFGRMIR-SGVRPKMDTYVMLMRKFERWGFL 377
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +W MK G P Y+ +I++L + LD A +Y +EM++ G+ P
Sbjct: 378 QPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 52/288 (18%), Positives = 125/288 (43%), Gaps = 38/288 (13%)
Query: 21 CKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNL-LSMNEVYREMKDDGFEP 78
C S ++A E F+ +++ F +++ +++ G+ +S + R + + P
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVP 115
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF- 137
+ V++ I+ + +A EA++ + +++ N + F L++ L K + EA +
Sbjct: 116 NHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETS-FYNLVDALCEHKHVVEAEELC 174
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
FG+ N + + S NT+ ++++L K
Sbjct: 175 FGK-------------NVIGNGFSVS--------------------NTKIHNLILRGWSK 201
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G + +K+M + G + +Y I + + C + + A++++ EMK+R + +
Sbjct: 202 LGWWGKCKEYWKKMDTE-GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVV 260
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
Y+T+I ++ ++ + F+EM + G P + + + L ++G
Sbjct: 261 AYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDG 308
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 150/314 (47%), Gaps = 4/314 (1%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKM---KKRRFDPDIKSYTILLEGWGQQKNLLS 63
KQ + FN +++ + + A + + + + F P++ +Y ++++ + +
Sbjct: 157 KQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDR 216
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ +REM PDV +Y ++N C +R DEAV L EM+A C P+P F LI+
Sbjct: 217 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLID 276
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L LS A + +G P TYN ++ C +++ A ++++M P
Sbjct: 277 ALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP 336
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY +++ L+K R E+ + M + G + Y ++ + + A+R+
Sbjct: 337 NQVTYGTIINGLVKQRRAEDGVHILMSMEER-GQKANEYIYSSLISGLFKEGKSENAVRL 395
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
W EM +G P + +Y I+ LC ++K D+A QEML G P +S+L +
Sbjct: 396 WKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFK 455
Query: 304 EGMEETAVVLAQKI 317
+G + A+++ +++
Sbjct: 456 KGDSQKAILVWKEM 469
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 145/336 (43%), Gaps = 36/336 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L +N +I LCK ++RA + F +M + +PD+ +Y+ L+ G +++ +
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM+ +G P+ V++ ++I+A A +L M C P+ + TLI+G
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +L +AL + P TY ++ R D ++ M + G N
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ L K G++E A ++K M+ K G +P V Y + C + + D A I
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEK-GCKPNVVVYGAFIDGLCRDEKPDEAEDIL 431
Query: 245 DEMKARGVLPVMHMYSTL-----------------------------------INSLCHE 269
EM ++G LP YS+L +N LC
Sbjct: 432 QEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCES 491
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+L +A + ML G++P +S++ + L D G
Sbjct: 492 GRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVG 527
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID L K+ + RA ++ D M + P+ +Y L+ G + L + +M
Sbjct: 271 FNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMV 330
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P+ V+YG +IN +R ++ V + ME K + +I+ +LI+GL E +
Sbjct: 331 SSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSE 390
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A++ + + ++G +P Y A + C + ++A ++ EM G PN TY ++
Sbjct: 391 NAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLM 450
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G +++A V+K M + V +++ C + ++ A+ +W M G+
Sbjct: 451 KGFFKKGDSQKAILVWKEMMSQ-DMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGL 509
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P + YS++I LC +D K F EM
Sbjct: 510 KPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 110/275 (40%), Gaps = 34/275 (12%)
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-T 109
L+E + + +++V MK +G + ++ A A EAV F M
Sbjct: 95 LIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDL 154
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+CK + F +++N + E S A +F Y V GA
Sbjct: 155 HCKQTVKSFNSVLNVIIQEGDFSYAFKF---------------YLHVFGA---------- 189
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
G PN TY++++ L K G+ + A F+ M K P V TY ++
Sbjct: 190 -------NSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLK-NCNPDVFTYSTLMN 241
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C +VD A+ + DEM+A G LP ++ LI++L L A K M G P
Sbjct: 242 GLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVP 301
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++ L L +G + A+ L +K+ + P
Sbjct: 302 NEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP 336
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 129/305 (42%), Gaps = 30/305 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K ++ LI L K E A ++ +M ++ P++ Y ++G + +
Sbjct: 364 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +EM GF P+ +Y ++ +A+ +++EM + + + +
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RK 178
L+NGL RL EAL + G +P+ Y++++ C ++ ++ EM ++
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQE 543
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-------------- 224
P+ TY+I+ + L + A + M + G +P T
Sbjct: 544 PKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDE-GCDPDSLTCNIFLETLRERINPP 602
Query: 225 --------EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH----EDKL 272
E+VVR+ ++ A+RI +EM R + P +S +I C + +
Sbjct: 603 QDGRLFLDELVVRLLKRERKLS-ALRIVEEMLLRFLPPEPSTWSRVIQRTCKPKRIRETI 661
Query: 273 DDACK 277
D+ C+
Sbjct: 662 DECCR 666
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 39/218 (17%)
Query: 127 SEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++ LS + Q F + G ++ T+ ++ Y S + ++++D M++ G
Sbjct: 65 AQNELSISPQIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREGRVLTE 124
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRM---------------------------------- 211
+ ++ KA EA + F RM
Sbjct: 125 TIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYL 184
Query: 212 ----SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+ G +P + TY ++++ C Q+D A+ + EM + P + YSTL+N LC
Sbjct: 185 HVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLC 244
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
E ++D+A EM G P F+ L AL G
Sbjct: 245 KERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 282
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 14/320 (4%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+F L+DTLCK ++ + A EVF+K +K ++ P+ K Y+IL+ GW + + ++M
Sbjct: 190 EFATLLDTLCKYKYPKVATEVFNK-RKYKYGPNEKMYSILIYGWCKVNRSDMAKKFLKDM 248
Query: 72 KDDGFEPDVVSYGIMINAHCSAK------RYDEAV----ELFREMEATNCKPSPHIFCTL 121
G EP++V+Y I++N C R+D V +L +EM +P + +
Sbjct: 249 LVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSII 308
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++ + L F K+RG P TY +V+ R+ D ++DEM G+
Sbjct: 309 LHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGV 368
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG--TEPTVSTYEIVVRMFCYNAQVDM 239
P+ TY+ L A ++ +M + PG T P + TY I++ MF +
Sbjct: 369 CPSPATYNCFLKEYRGRKDVTAALELYNKM-KAPGSLTAPDIHTYNILLGMFSKLNRHGT 427
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
M IW +M V P + Y+ LI+ C K +AC++F EM++ G P F L +
Sbjct: 428 VMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETLYR 487
Query: 300 ALRDEGMEETAVVLAQKIDK 319
L M T L +++D+
Sbjct: 488 GLIQADMLRTWRRLKRRVDE 507
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 97/227 (42%), Gaps = 17/227 (7%)
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
EPD + +++ C K A E+F + + P+ ++ LI G R A +
Sbjct: 185 EPDAAEFATLLDTLCKYKYPKVATEVFNKRK-YKYGPNEKMYSILIYGWCKVNRSDMAKK 243
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR----------MMDEMRKCGIGPNTR 186
F G EP TYN ++ C ++ YR ++ EMR GI P+
Sbjct: 244 FLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVT 303
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y I+LH +A + E +F+ M + G PTV+TY V++ +++ + DE
Sbjct: 304 SYSIILHVYSRAHKPELCLCMFRSMKER-GICPTVATYTSVIKCLSSCGRLEDGEILLDE 362
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
M A GV P Y+ + + A + + +M + PG L
Sbjct: 363 MVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKM-----KAPGSL 404
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + +I L +E + + D+M P +Y L+ + +K+
Sbjct: 328 MKERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKD 387
Query: 61 LLSMNEVYREMKDDG--FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ + E+Y +MK G PD+ +Y I++ R+ ++++ +M + P +
Sbjct: 388 VTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSY 447
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
LI+ ++ EA QFF + ++GF P+ T+ +
Sbjct: 448 TLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETL 485
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+P + Y+AVV A + + + A+R++ + G + RT+ ++ + AG T +A
Sbjct: 115 QPRSDAYDAVVDALGRARQFDAAWRVVVDASADGAA-SPRTFAVLARRYVAAGMTRQAIR 173
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
F M EP + + ++ C +A ++++ K + P MYS LI
Sbjct: 174 AFDDMEAFVSREPDAAEFATLLDTLCKYKYPKVATEVFNKRKYK-YGPNEKMYSILIYGW 232
Query: 267 CHEDKLDDACKYFQEMLDIGIRP 289
C ++ D A K+ ++ML GI P
Sbjct: 233 CKVNRSDMAKKFLKDMLVHGIEP 255
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/212 (18%), Positives = 90/212 (42%), Gaps = 6/212 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ ++ ++ ++ E +F MK+R P + +YT +++ L
Sbjct: 297 GIEPDVTSYSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDG 356
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP--HIFCTLI 122
+ EM +G P +Y + + K A+EL+ +M+A +P H + L+
Sbjct: 357 EILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILL 416
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
R + + + P+ +Y ++ +C S + +A + EM + G
Sbjct: 417 GMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFL 476
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
P T++ + LI+A + ++R+ R+
Sbjct: 477 PQKITFETLYRGLIQA----DMLRTWRRLKRR 504
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 158/345 (45%), Gaps = 36/345 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ +L ++ I+ C+ + A V KM K ++PDI + + LL G+ K
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 LLSMNEVYREMKDDGF-----------------------------------EPDVVSYGI 85
+ + +M + G+ +PD+V+YG
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++N C D A+ L +MEA K + IF T+I+ L + + A+ F + + +G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P TYN+++ C R +DA R++ M + I PN T++ ++ K G+ EA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ + M ++ +P TY +++ FC + ++D A +++ M ++ LP + Y+TLIN
Sbjct: 349 KLHEEMIQRS-IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLING 407
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
C +++D + F+EM G+ ++ + Q G ++A
Sbjct: 408 FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 152/304 (50%), Gaps = 5/304 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + +N LI+ LC A + M +++ +P++ ++ L++ + ++
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ +++ EM +PD ++Y ++IN C R DEA ++F+ M + +C P+ + T
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING KR+ + ++ F + +RG TY ++ + + + A + +M
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + TY I+LH L G+ + A +FK + +K E + Y ++ C +V A
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYL-QKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
WD + + P + Y+T+I+ LC + L +A F++M + G P ++ L +A
Sbjct: 523 ---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Query: 301 -LRD 303
LRD
Sbjct: 580 NLRD 583
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 1/281 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+ +FN+L+ + K E + ++M+ D+ +Y+I + + ++ L V
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+M G+EPD+V+ ++N +C +KR +AV L +M KP F TLI+GL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ SEA+ Q +RG +P+ TY VV C I+ A ++++M I N +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ L K E A +F M K G P V TY ++ C + A R+ M
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETK-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + P + ++ LI++ E KL +A K +EM+ I P
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 154/354 (43%), Gaps = 36/354 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + ++ + L++ C S+ + A + D+M + + PD ++T L+ G
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +M G +PD+V+YG ++N C D A+ L +MEA K + IF T
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L + + A+ F + + +G P TYN+++ C R +DA R++ M +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 181 IGPNTRTYDIVLHHLIKAG-----------------------------------RTEEAY 205
I PN T++ ++ K G R +EA
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+FK M K P + TY ++ FC +V+ + ++ EM RG++ Y+T+I
Sbjct: 384 QMFKFMVSKD-CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQG 442
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
D A F++M+ + +S L L G +TA+V+ + + K
Sbjct: 443 FFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 137/292 (46%), Gaps = 5/292 (1%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
NRL D + V+ A ++F M K R P I + LL + + + +M+
Sbjct: 56 NRLSDII----KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G D+ +Y I IN C + A+ + +M +P +L+NG KR+S+
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+ Q + G++P+ T+ ++ + ++A ++D+M + G P+ TY V++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K G + A ++ +M + V + ++ C V++A+ ++ EM+ +G+
Sbjct: 232 GLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + Y++LIN LC+ + DA + ML+ I P F+ L A EG
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEG 342
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 108/255 (42%), Gaps = 15/255 (5%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ ++ G P V S+ + + C + + A +RE+ L N L
Sbjct: 14 VHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYREI--------------LRNRLS 59
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A+ FG K P +N ++ A + + ++M+ GI +
Sbjct: 60 DIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY 119
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I ++ + + A +V +M K G EP + T ++ +C++ ++ A+ + D+
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G P ++TLI+ L +K +A +M+ G +P + + L G
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 307 EETAVVLAQKIDKLR 321
+ A+ L K++ R
Sbjct: 239 IDLALNLLNKMEAAR 253
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 32/188 (17%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG---WGQ 57
M + GL + +I ++ + AQ VF +M R DI +Y+ILL G +G+
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 58 -----------QKNLLSMNE-VYREMKDD-----------------GFEPDVVSYGIMIN 88
QK+ + +N +Y M + +PDVV+Y MI+
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMIS 543
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
CS + EA +LFR+M+ P+ + TLI + + + + + + GF
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVG 603
Query: 149 EAPTYNAV 156
+A T + V
Sbjct: 604 DASTISLV 611
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+K ++ +N +I LC R ++ A ++F KMK+ P+ +Y L+ + +
Sbjct: 528 SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRA 587
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMIN 88
+ E+ +EM+ GF D + ++ N
Sbjct: 588 ASAELIKEMRSSGFVGDASTISLVTN 613
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 155/305 (50%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN +I + A E+++ M + PD +Y+IL+ G + + S + REM+
Sbjct: 298 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREME 357
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF P+VV+Y I++++ C +D+ L EM A + + +I L + R+
Sbjct: 358 KKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMD 417
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ + + +G P+ +YN ++ C + ++ +A M + + + G+ N TY+ ++
Sbjct: 418 EAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTII 477
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L++ GR ++A + K M G V +Y +++ C + VD ++ + +EM +G+
Sbjct: 478 HALLRDGRWQDAVRLAKEMILH-GCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 536
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P Y+ LI+ LC E ++ DA + ++ML+ G+ P ++ L L G A+
Sbjct: 537 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 596
Query: 313 LAQKI 317
L +K+
Sbjct: 597 LLEKL 601
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 156/314 (49%), Gaps = 5/314 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G ++ F+ ++ +C V A + D+M + P + +Y LL+G + +
Sbjct: 223 MGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQ--- 279
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ R M E +VV + +I + + EA EL+ M C+P H + L++
Sbjct: 280 -ADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMH 338
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL R+ A++ + +K+GF P TY V+ ++C + +D +++EM G+
Sbjct: 339 GLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTL 398
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N++ Y+ +++ L K GR +EA + + M R G P + +Y ++ C N Q++ A +
Sbjct: 399 NSQGYNGMIYALCKDGRMDEAMGLIQEM-RSQGCNPDICSYNTIIYHLCNNEQMEEAEHM 457
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
++ + GV+ Y+T+I++L + + DA + +EM+ G ++ L +A+
Sbjct: 458 FENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCK 517
Query: 304 EGMEETAVVLAQKI 317
+G + ++VL +++
Sbjct: 518 DGNVDRSLVLLEEM 531
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 32/336 (9%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F LC+ + A + M + PD Y ++ Q + + EM
Sbjct: 162 FGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEML 221
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS------------------ 114
G DV ++ ++ C R EA L M C P
Sbjct: 222 LMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQAD 281
Query: 115 ---------PH----IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
P +F T+I G +E +L+EA + + +G +P+A TY+ ++ C
Sbjct: 282 EARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 341
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
RI A R++ EM K G PN TY IVLH K G ++ ++ + MS K G
Sbjct: 342 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK-GLTLNS 400
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
Y ++ C + ++D AM + EM+++G P + Y+T+I LC+ +++++A F+
Sbjct: 401 QGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFEN 460
Query: 282 MLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+L+ G+ G ++ + AL +G + AV LA+++
Sbjct: 461 LLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 496
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 4/291 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
+ GLK PD ++ L+ LCK + A + +M+K+ F P++ +YTI+L + +
Sbjct: 319 ETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKN 378
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ EM G + Y MI A C R DEA+ L +EM + C P +
Sbjct: 379 GMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSY 438
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
T+I L + +++ EA F + G TYN ++ A R DA R+ EM
Sbjct: 439 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 498
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G + +Y+ ++ + K G + + + + M+ K G +P +Y I++ C +V
Sbjct: 499 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEK-GIKPNNVSYNILISELCKERRVR 557
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A+ + +M +G+ P + Y+TLIN LC + A +++ + + P
Sbjct: 558 DALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHP 608
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 33/283 (11%)
Query: 67 VYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+YR M D P ++G+ A C R DEA+ L R M C P ++ T+I+ L
Sbjct: 145 LYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHAL 204
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ ++EA + G + T++ VV C R+ +A R++D M G P
Sbjct: 205 CDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGV 264
Query: 186 RTYDIVLHHLIKA-------------------------------GRTEEAYSVFKRMSRK 214
TY +L L + G+ EA +++ M K
Sbjct: 265 MTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLK 324
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G +P TY I++ C ++ A+R+ EM+ +G P + Y+ +++S C DD
Sbjct: 325 -GCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDD 383
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+EM G+ Q ++ + AL +G + A+ L Q++
Sbjct: 384 TRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 426
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL +N +I LCK ++ A + +M+ + +PDI SY ++ +
Sbjct: 391 MSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQ 450
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ + ++G + ++Y +I+A R+ +AV L +EM C +
Sbjct: 451 MEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNG 510
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + + + +L + ++G +P +YN ++ C R+ DA + +M G
Sbjct: 511 LIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQG 570
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ +++ L K G A ++ +++ + P + TY I++ C +D A
Sbjct: 571 LAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE-NVHPDIITYNILISWHCKVRLLDDA 629
Query: 241 MRIWDEMKARGVLPV 255
+ + A V PV
Sbjct: 630 AMLLNRAMA-AVCPV 643
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%)
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+++++RM + PT T+ + R C + D A+ + M G +P +Y T+I+
Sbjct: 143 FALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIH 202
Query: 265 SLCHEDKLDDACKYFQEMLDIG 286
+LC + + +A EML +G
Sbjct: 203 ALCDQGGVTEAATLLNEMLLMG 224
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 145/286 (50%), Gaps = 5/286 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G + +L F L+ +LC+ +HVE A+ +F + KK F KS+ I+L GW + +L
Sbjct: 210 YGFELDLVGFQILLMSLCRYKHVEEAEALF-REKKDEFPHVTKSWNIILNGWCVKGSLRD 268
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ ++ E D+ ++G INA R AV+LF++M P I +I+
Sbjct: 269 AQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINPDVAICNCIID 328
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L +K++ EAL+ FG+ R + + TYN ++ C R+ Y ++D+M G P
Sbjct: 329 QLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCPP 388
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N RTY +L + ++ ++ +RM R G + Y +++ ++ +I
Sbjct: 389 NNRTYSYILK---TTEKPKDVIALMQRMERT-GCKLDSDIYNLILNLYIKWKYEKGMQQI 444
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
WDEM+ RG P ++ +++ L + KLD+A +Y+ M G+ P
Sbjct: 445 WDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIP 490
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+ ++ +N LI +CK + +E+ E+ D M+ + P+ ++Y+ +L+ + K+++++ +
Sbjct: 352 QADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCPPNNRTYSYILKTTEKPKDVIALMQ 411
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
M+ G + D Y +++N + K +++ EME P F +++GL
Sbjct: 412 ---RMERTGCKLDSDIYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLH 468
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPT 152
S+ +L EALQ++ K RG PE T
Sbjct: 469 SQGKLDEALQYYTTMKSRGMIPEPRT 494
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K + +N +++ K ++ + Q+++D+M++R PD +S+TI++ G Q
Sbjct: 413 MERTGCKLDSDIYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGK 472
Query: 61 LLSMNEVYREMKDDGFEPD 79
L + Y MK G P+
Sbjct: 473 LDEALQYYTTMKSRGMIPE 491
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 156/297 (52%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ GL + + LID CK+ +ERA+ FDKM + + ++T+L+ G ++
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGL 247
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ +MK +G P++ +Y ++N +C + A +LF EM + + + T
Sbjct: 248 KKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNT 307
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G+ E+R+ EA + Q KK P TYN ++G +C ++ A ++D+++ G
Sbjct: 308 LIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG 367
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+I++ KAG + + + M + G P+ T +++ + +++ A
Sbjct: 368 LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGR-GISPSKVTCTVLIDAYVRLQEMEKA 426
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+I+ M+ G++P +++Y LI+ LC + + ++ K F+ M ++ + P +++ +
Sbjct: 427 FQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTM 483
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 143/296 (48%), Gaps = 1/296 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL L +N L++ C + RA ++FD+M++R + ++ +Y L+ G +++ +
Sbjct: 262 GLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEA 321
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +MK P++++Y +I C D+A L ++++ PS + LI G
Sbjct: 322 EKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEG 381
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + RG P T ++ AY + A+++ M K G+ P+
Sbjct: 382 YSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPD 441
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y +++H L G +E+ +F+ M EP+ Y ++ +C A+R+
Sbjct: 442 VYVYGVLIHGLCMKGNMKESSKLFRSMGEMH-VEPSDVIYNTMIHGYCKEDNSYRALRLL 500
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
EM+A+G++P + YS++I LC + K ++A +M+++ ++P + + + +A
Sbjct: 501 REMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 133/278 (47%), Gaps = 4/278 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN L+ +L +S E+A F+++K+R +FD + S+ I+++G + NL ++ +
Sbjct: 131 FNSLLGSLVRSNCFEKAWLFFNELKERVKFD--VYSFGIMIKGCCENGNLDKSFQLLGLL 188
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+D G P+VV Y +I+ C + A F +M + + F LINGL +
Sbjct: 189 QDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLK 248
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ F + K G P TYN ++ YC +I A+ + DEMR+ G+ N TY+ +
Sbjct: 249 KDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTL 308
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ + + R EA + +M +K P + TY ++ FC +D A + D++K+ G
Sbjct: 309 IGGMCREERVWEAEKLVDQM-KKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG 367
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ P + Y+ LI +EM GI P
Sbjct: 368 LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISP 405
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 147/324 (45%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL F LI+ L K + ++F+KMK P++ +Y L+ + +
Sbjct: 223 MGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGK 282
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM++ G E +VV+Y +I C +R EA +L +M+ P+ + T
Sbjct: 283 ICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNT 342
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G L +A Q K G P TYN ++ Y + + EM G
Sbjct: 343 LIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRG 402
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ T +++ ++ E+A+ ++ M K G P V Y +++ C + +
Sbjct: 403 ISPSKVTCTVLIDAYVRLQEMEKAFQIYSSM-EKFGLVPDVYVYGVLIHGLCMKGNMKES 461
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M V P +Y+T+I+ C ED A + +EM G+ P +S++
Sbjct: 462 SKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGV 521
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +G E A VL K+ +L+ P
Sbjct: 522 LCKDGKWEEAEVLLDKMIELQLKP 545
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 38/277 (13%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y +INAH ++ D+A+ F EM P+IF +L+ L +A FF + K
Sbjct: 96 YESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELK 155
Query: 143 KR----------------------------------GFEPEAPTYNAVVGAYCWSMRIND 168
+R G P Y ++ C + I
Sbjct: 156 ERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIER 215
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A D+M + G+ N T+ ++++ L K G ++ + +F++M + G P + TY ++
Sbjct: 216 ARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKM-KINGLFPNLYTYNCLM 274
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+C ++ A ++DEM+ RGV + Y+TLI +C E+++ +A K +M +
Sbjct: 275 NEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVS 334
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 325
P ++ L D G + A L +D+L+ L
Sbjct: 335 PNLITYNTLIGGFCDVGNLDKASSL---LDQLKSNGL 368
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+KFGL ++ + LI LC +++ + ++F M + +P Y ++ G+ ++ N
Sbjct: 433 MEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDN 492
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ REM+ G P+V SY +I C +++EA L +M KPS I
Sbjct: 493 SYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASI--- 549
Query: 121 LINGLGSEKRLSE 133
+N + K +E
Sbjct: 550 -LNMISKAKNFTE 561
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 141/289 (48%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K L ++ +N LI C+ ++ A + D+++ R +I +Y L++G + +
Sbjct: 368 MLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGD 427
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + ++ +M + G PDVV+Y +++N C A E F EM P +
Sbjct: 428 LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTA 487
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I G ++A + + +GF P+ TYN V C + +A ++ +M + G
Sbjct: 488 RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDG 547
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY +H ++ G E +F M + G PTV TY +++ N ++D A
Sbjct: 548 HVPDHVTYTSFMHAHMENGHLREGREIFYDMLSR-GQTPTVVTYTVLIHAHALNGRLDWA 606
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M + EM+ +GV+P + Y+ LIN C K+D ACK+F EM + GI P
Sbjct: 607 MAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFP 655
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 132/274 (48%), Gaps = 1/274 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++D L + VF+KM + RF PD+K+ +L+ + L+ EVYR M + G
Sbjct: 173 IVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYG 232
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P V +Y M+++ C A++L +M+ C PS F LINGL + L +A
Sbjct: 233 IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAK 292
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ K G TYN ++ YC + +A + +EM G+ P +++ +++
Sbjct: 293 GLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGF 352
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G+ +A M +K P + +Y ++ FC + A + DE++ R +
Sbjct: 353 CKEGKMSDARQQLSDMLKK-NLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFN 411
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ Y+TLI+ LC L+ A K ++M++ GI P
Sbjct: 412 IVTYNTLIDGLCRLGDLETALKLKEDMINRGIHP 445
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 133/284 (46%), Gaps = 1/284 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L + +N LID LC+ +E A ++ + M R PD+ +YT+L+ G + N+L
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E + EM G PD +Y I +A +L EM P + +NGL
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
L EA + + + G P+ TY + + A+ + + + + +M G P
Sbjct: 528 CKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTV 587
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY +++H GR + A + F M K G P V TY +++ FC ++D A + +
Sbjct: 588 VTYTVLIHAHALNGRLDWAMAYFLEMQEK-GVVPNVITYNVLINGFCKVRKMDQACKFFI 646
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM+ +G+ P + Y+ LIN C+ K +A + + +ML IRP
Sbjct: 647 EMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRP 690
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 7/327 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++G++ + +N ++ + CK V+RA ++ KM++R P ++ +L+ G ++
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGE 287
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +EM G +Y +I +C EA+ L+ EM P+ T
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ G E ++S+A Q K+ P+ +YN ++ +C I +A+ ++DE+R
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN 407
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N TY+ ++ L + G E A + + M + G P V TY ++V C + MA
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINR-GIHPDVVTYTVLVNGACKLGNMLMA 466
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF---QEMLDIGIRPPGQLFSNL 297
+DEM G+ P Y+ I E KL D K F +EML G P ++
Sbjct: 467 KEFFDEMLHVGLAPDQFAYTARI---VGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVF 523
Query: 298 KQALRDEGMEETAVVLAQKIDKLRKTP 324
L G E A L QK+ + P
Sbjct: 524 VNGLCKLGNLEEAGELLQKMIRDGHVP 550
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 136/283 (48%), Gaps = 4/283 (1%)
Query: 10 LPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD NR++ L + +A EV+ M + P + +Y +L + + + +
Sbjct: 199 LPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALD 258
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ +M++ G P V++ ++IN +A L +EM + SP+ + LI G
Sbjct: 259 LVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYC 318
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ L EAL + + RG P ++N ++ +C +++DA + + +M K + P+
Sbjct: 319 KKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDII 378
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y+ +++ + G EA+ + + R + TY ++ C ++ A+++ ++
Sbjct: 379 SYNTLIYGFCRLGNIGEAFILLDEL-RFRNLSFNIVTYNTLIDGLCRLGDLETALKLKED 437
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M RG+ P + Y+ L+N C + A ++F EML +G+ P
Sbjct: 438 MINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAP 480
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 96/193 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N ++ LCK ++E A E+ KM + PD +YT + + +L
Sbjct: 512 GFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREG 571
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ +M G P VV+Y ++I+AH R D A+ F EM+ P+ + LING
Sbjct: 572 REIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLING 631
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+++ +A +FF + +++G P TY ++ C + +A R+ +M I P+
Sbjct: 632 FCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPD 691
Query: 185 TRTYDIVLHHLIK 197
+ T+ +L L K
Sbjct: 692 SCTHGALLKKLDK 704
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ + + +L L +A V+ RM + G PTV+TY ++ FC +V A+
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVY-RMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALD 258
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ +M+ RG P ++ LIN L + +L A QEM G+R ++ L
Sbjct: 259 LVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYC 318
Query: 303 DEGMEETAVVLAQKIDKLRKTPLV 326
+G+ A+ L +++ +P V
Sbjct: 319 KKGLLVEALALWEEMVTRGVSPTV 342
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 149/297 (50%), Gaps = 2/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ FGL+ FN LID C + +++A+E KM ++ P +++Y L++G+G+
Sbjct: 412 MESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCT 471
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +M++ G +P+VVSYG +IN C + EA + R+M P+ ++
Sbjct: 472 FDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNM 531
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ +AL+FF + + P TYN ++ C ++ +A + ++ G
Sbjct: 532 LIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ TY+ ++ AG + +++ M + G +PTV TY ++ C +++
Sbjct: 592 HSPDVITYNSLISGYANAGNVSKCLGLYETM-KNLGIKPTVRTYHPLIS-GCSKEGIELV 649
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++++EM +LP +Y+ +I+ A Q MLD GI P +++L
Sbjct: 650 EKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSL 706
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 145/297 (48%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M L + +N LID CK ++ A ++ ++MK++ P+I ++ LL G + +
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +EM+ +GF PD +Y I+ + + A+EL+ + + + +
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSI 356
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL + ++ +A + + + G + YN V YC +N A ++ M G
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN+ T++ ++ ++A K+M+ K G P+V TY ++ + D
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEK-GVTPSVETYNTLIDGYGKLCTFDRC 475
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+I ++M+ GV P + Y +LIN LC + K+ +A ++M+ G+ P Q+++ L
Sbjct: 476 FQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNML 532
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 153/349 (43%), Gaps = 36/349 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPD---------------------------- 44
FN L+ LCK R ++ A+ + +M+ F PD
Sbjct: 284 FNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQAT 343
Query: 45 -----IKSYT--ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYD 97
I +YT ILL G +Q + E+ ++ ++G D V Y +N +C +
Sbjct: 344 EKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMN 403
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+A+ ME+ +P+ F +LI+ K + +A ++ + ++G P TYN ++
Sbjct: 404 KAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLI 463
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
Y + ++++++M + G+ PN +Y +++ L K G+ EA V + M + G
Sbjct: 464 DGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR-GV 522
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P Y +++ C +V A+R +DEM + P + Y+ LI+ LC + KL +A
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+ ++ G P +++L + G + L + + L P V
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTV 631
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 133/292 (45%), Gaps = 1/292 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L++ LCK VE+A+E+ K + D Y + G+ + ++ M+ G
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P+ +++ +I+ C K D+A E ++M PS + TLI+G G
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCF 476
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q Q ++ G +P +Y +++ C +I +A ++ +M G+ PN + Y++++
Sbjct: 477 QILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGS 536
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
G+ ++A F M R PT+ TY +++ C ++ A ++ + G P
Sbjct: 537 CMVGKVKDALRFFDEMMRSE-ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPD 595
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+ Y++LI+ + + ++ M ++GI+P + + L EG+E
Sbjct: 596 VITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIE 647
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 129/272 (47%), Gaps = 1/272 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ CKS+ + A E+++ M++ P + S ++L +K + + +++ E+++ G
Sbjct: 112 LLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSG 171
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F D Y I A + +E M +P+ I+ LI GL EKR+ +A
Sbjct: 172 FRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAE 231
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + TYN ++ YC ++ A++M + M++ + PN T++ +L L
Sbjct: 232 KMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGL 291
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K + +EA S+ K M G P TY I+ + AM ++++ +G+
Sbjct: 292 CKMRKMKEARSLLKEMEVN-GFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRIN 350
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ S L+N LC + K++ A + ++ + G+
Sbjct: 351 NYTGSILLNGLCKQGKVEKAEEILKKFTENGL 382
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 1/300 (0%)
Query: 28 RAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMI 87
+ ++F +++ F D Y ++ + +NL E M+ G P+V Y ++I
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218
Query: 88 NAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
C KR +A ++F EM N S + TLI+G L A + + K++
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P T+N+++ C ++ +A ++ EM G P+ TY I+ L++ A +
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+++ + K G T I++ C +V+ A I + G++ +Y+T +N C
Sbjct: 339 YEQATEK-GIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYC 397
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
++ A + M G+RP F++L D + A +K+ + TP V+
Sbjct: 398 RIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVE 457
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 50 ILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
+LL + K L E+Y M+ DG P +VS ++ + + K++ + V+LF E+E +
Sbjct: 111 MLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENS 170
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+ ++ I + L ++F +KRG P YN ++G C RI DA
Sbjct: 171 GFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDA 230
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+M DEM + + TY+ ++ K G + A+ + +RM K P + T+ ++
Sbjct: 231 EKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEK-SVAPNIITFNSLLS 289
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C ++ A + EM+ G +P + YS L + L D + A + +++ + GIR
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQK 316
S L L +G E A + +K
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKK 376
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 1/210 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N LI + +V + +++ MK P +++Y L+ G ++ L +
Sbjct: 591 GHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIEL-V 649
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++Y EM PD V Y MI+ + +A L + M P + +LI G
Sbjct: 650 EKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILG 709
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E +LS K + P+A TY+ +V +C + AY EM + PN
Sbjct: 710 HFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPN 769
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+ + L + GR +E + M+ K
Sbjct: 770 ASICNELTAGLEQEGRLQEVQVICSEMNVK 799
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 3/146 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N +I + + ++A + M + PD +Y L+ G ++ L ++ +
Sbjct: 662 LPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKD 721
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ MK P +Y I++ HC K + A +REM N P+ I L GL
Sbjct: 722 LVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLE 781
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPT 152
E RL E + +G P+
Sbjct: 782 QEGRLQEVQVICSEMNVKGIINHWPS 807
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + ++ LI C +E ++++++M + PD Y ++ + + N
Sbjct: 622 MKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGN 680
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ M D G PD ++Y +I H + +L M+A P +
Sbjct: 681 TQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDI 740
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ G K S A ++ + + F P A N + R+ + + EM G
Sbjct: 741 LVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKG 800
Query: 181 I 181
I
Sbjct: 801 I 801
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 148/298 (49%), Gaps = 1/298 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +N LID C +++A D+M R + +Y +L+ +K +
Sbjct: 317 GLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +EM++ G EPDVV+Y I IN +C +A+ LF EM N +P+ + +LI+
Sbjct: 377 EDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDV 436
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
G R+SEA + F +S K G P+ +NA++ +C + I+ A++++ EM + P+
Sbjct: 437 FGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPD 496
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ + + EEA + M + G +P +Y ++ + + A+ ++
Sbjct: 497 EVTFNTLMQGYCRERKVEEAKKLLDEMKER-GIKPDHISYNTLISGYSKRGDMKDALEVF 555
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
DEM + G P + Y+ LI + D A + +EM GI P + + +A++
Sbjct: 556 DEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMK 613
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 156/305 (51%), Gaps = 13/305 (4%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILL-----EG-WGQQKNLLSMNEVYREMKDDGFEPD 79
++ A V+++M K I ++ I++ EG W + K+ + EVY G +P+
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVY------GVKPN 251
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
VV+Y +IN +C +++ A ++F+ M+ N KP + + + I+ L E+R+ EA
Sbjct: 252 VVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLC 311
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ + G P A TYNA++ C ++ A+ DEM GI + TY++++H L
Sbjct: 312 KLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK 371
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
R EEA + K M R+ G EP V TY I + +C A+ ++DEM + + P + Y
Sbjct: 372 RIEEAEDMIKEM-REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETY 430
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
++LI+ +++ +A + F++ + G+ P +F+ L G + A L +++D
Sbjct: 431 TSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDN 490
Query: 320 LRKTP 324
+ P
Sbjct: 491 AKVVP 495
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 155/314 (49%), Gaps = 2/314 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K +K + FN +I+ LC+ ++A++ M+ P++ +Y ++ G+ +
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++++ MKD +PD +Y I+ C +R +EA + ++ + P+ +
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ L +A + + RG TYN ++ A RI +A M+ EMR+ G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+I ++ + G ++A S+F M K PTV TY ++ +F ++ A
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEK-NIRPTVETYTSLIDVFGKRNRMSEA 446
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + G+LP + M++ LI+ C +D A + +EM + + P F+ L Q
Sbjct: 447 EEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506
Query: 301 L-RDEGMEETAVVL 313
R+ +EE +L
Sbjct: 507 YCRERKVEEAKKLL 520
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKS---YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
H +F+++ R ++K+ + +LL + Q + E MK++ P
Sbjct: 124 HTTTPTVIFNELSLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTE 183
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+ +++ + A ++ EM N K S F +IN L E + +A F G
Sbjct: 184 TCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHM 243
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+ G +P TYN V+ YC + A ++ M+ + P+ TY+ + L K R
Sbjct: 244 EVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRI 303
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EEA V ++ + G P TY ++ C +D A DEM RG++ + Y+
Sbjct: 304 EEASGVLCKL-LESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRP 289
LI++L E ++++A +EM + G+ P
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEP 390
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD FN L+ C+ R VE A+++ D+MK+R PD SY L+ G+ ++ ++ E
Sbjct: 494 VPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALE 553
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ EM GF+P +++Y +I + D A EL REM++ P + +I +
Sbjct: 554 VFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMK 613
Query: 127 SEKRLSE 133
+ L E
Sbjct: 614 TNDDLVE 620
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 7/162 (4%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD FN LID C + +++RA ++ +M + PD ++ L++G+ +++ + +
Sbjct: 459 LPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKK 518
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EMK+ G +PD +SY +I+ + +A+E+F EM + P+ + LI G
Sbjct: 519 LLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYS 578
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
A + + + +G P+ TY V+ A M+ ND
Sbjct: 579 KIGEADHAEELLREMQSKGITPDDSTYLYVIEA----MKTND 616
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 158/332 (47%), Gaps = 15/332 (4%)
Query: 1 MDKF-GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M+ F G + +F L+DTLCK ++ + A E+F+K +K +++P+ K YTIL+ GW +
Sbjct: 180 MEAFVGREANSAEFATLLDTLCKYKYPKVATEIFNK-RKYKYNPNEKMYTILIYGWCKVN 238
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAK------RYDEAV----ELFREMEAT 109
+ ++M D G EP++V+Y I++N C R+D V ++ +EM
Sbjct: 239 RNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHSAEDVLKEMRDR 298
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+P + +++ + + F K RG P TY +V+ R+ DA
Sbjct: 299 GIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDA 358
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG--TEPTVSTYEIV 227
++DEM G+ P+ TY+ A ++ +M ++PG T P + TY I+
Sbjct: 359 ETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKM-KQPGSLTAPDIHTYNIL 417
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ MF + IW +M V P + Y+ LI+ C K +AC++F EM++ G
Sbjct: 418 LGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEKGF 477
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
P F L + L M T L +++D+
Sbjct: 478 LPQKITFETLYRGLIQADMLRTWRRLKRRVDE 509
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 153/324 (47%), Gaps = 36/324 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M ++G + +N ++ LCK + + +++ +MK P+ +Y IL+ G+ + K
Sbjct: 237 MGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKW 296
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L EV M G PDV +Y M+ C + DEAV L +ME+ P + T
Sbjct: 297 LKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNT 356
Query: 121 LING-----------------------------------LGSEKRLSEALQFFGQSKKRG 145
LI+G +E ++ EA + + G
Sbjct: 357 LIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESG 416
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F P+ TYN ++ YC + ++ +AY+MMDEM + G+ +T T + +LH + + ++AY
Sbjct: 417 FSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAY 476
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
++ + +RK G TY ++ + + Q D A+++W+EMK G++ + Y+T+I
Sbjct: 477 TLTMK-ARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRG 535
Query: 266 LCHEDKLDDACKYFQEMLDIGIRP 289
LC K D A E+L+ G+ P
Sbjct: 536 LCLSGKTDQAVDKLNELLEKGLVP 559
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 155/310 (50%), Gaps = 4/310 (1%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K LPD +N ++ LC ++ A + DKM+ + PD+ +Y L++G + + +
Sbjct: 310 KGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDA 369
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EMK G + + V++ IMI C+ + DEA + +M + P + T+IN
Sbjct: 370 AFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMIN 429
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G +++EA + + ++G + + T N ++ C +++DAY + + RK G
Sbjct: 430 GYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYIL 489
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY ++ K + + A +++ M ++ G T+ TY ++R C + + D A+
Sbjct: 490 DEVTYGTLIMGYFKDEQADRALKLWEEM-KETGIVATIITYNTIIRGLCLSGKTDQAVDK 548
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+E+ +G++P + +I+ C E ++ A ++ +M++ ++P + L + L
Sbjct: 549 LNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCR 608
Query: 304 EGMEETAVVL 313
EGM E + L
Sbjct: 609 EGMLEKGLTL 618
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 140/274 (51%), Gaps = 3/274 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G++ + FN LI C + E A + ++M + PD +Y +L ++ L
Sbjct: 204 KLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLT 263
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ ++ +MK+ G P+ +Y I+++ +C K EA E+ M P + T++
Sbjct: 264 QVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMV 323
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND-AYRMMDEMRKCGI 181
GL E ++ EA++ + + P+ TYN ++ C+ R +D A+++++EM+ G+
Sbjct: 324 RGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGV 382
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
N T++I++ G+ +EA +V +M + G P TY ++ +C ++ A
Sbjct: 383 KENGVTHNIMIKWFCTEGKIDEASNVMVKMV-ESGFSPDCFTYNTMINGYCKAGKMAEAY 441
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
++ DEM +G+ +TL++++C E +LDDA
Sbjct: 442 KMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDA 475
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 4/270 (1%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYREMKDDGFEPD 79
S+ ++F+KMK+ RF P++ + LL +L+ EV+++ G +P+
Sbjct: 151 SKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPN 210
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
V ++ I+I+ +CS +EA+ L +M C P + T++ L +L++
Sbjct: 211 VNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLL 270
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
Q K G P TYN +V YC + +A +++ M G+ P+ TY+ ++ L G
Sbjct: 271 QMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+ +EA + +M P V TY ++ + D A ++ +EMKARGV +
Sbjct: 331 KIDEAVRLRDKMESFKLV-PDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTH 389
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +I C E K+D+A +M++ G P
Sbjct: 390 NIMIKWFCTEGKIDEASNVMVKMVESGFSP 419
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 159/355 (44%), Gaps = 40/355 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ F L ++ +N LID + R + A ++ ++MK R + ++ I+++ + +
Sbjct: 342 MESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGK 401
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + V +M + GF PD +Y MIN +C A + EA ++ EM K T
Sbjct: 402 IDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNT 461
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ + EK+L +A +++KRG+ + TY ++ Y + + A ++ +EM++ G
Sbjct: 462 LLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETG 521
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I TY+ ++ L +G+T++A + K G P ST I++ +C+ V+ A
Sbjct: 522 IVATIITYNTIIRGLCLSGKTDQAVDKLNELLEK-GLVPDESTSNIIIHGYCWEGAVEKA 580
Query: 241 MRIWDEMKARGVLPVMHM-----------------------------------YSTLINS 265
+ ++M + P + Y+ +I+S
Sbjct: 581 FQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISS 640
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPP----GQLFSNLKQALRDEGMEETAVVLAQK 316
C E +L+DA EM + P + + L +A R E E+ A+ A+K
Sbjct: 641 FCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEK 695
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 145/322 (45%), Gaps = 4/322 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVER---AQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M + + L N L++ L +S ++EVF K P++ ++ IL+ G+
Sbjct: 164 MKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCS 223
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
N + +M + G PD V+Y ++ A C + + +L +M+ + P+ +
Sbjct: 224 DNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNT 283
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L++G K L EA + +G P+ TYN +V C +I++A R+ D+M
Sbjct: 284 YNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKME 343
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ P+ TY+ ++ + ++ A+ + + M + G + T+ I+++ FC ++
Sbjct: 344 SFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKAR-GVKENGVTHNIMIKWFCTEGKI 402
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D A + +M G P Y+T+IN C K+ +A K EM G++ + L
Sbjct: 403 DEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTL 462
Query: 298 KQALRDEGMEETAVVLAQKIDK 319
+ E + A L K K
Sbjct: 463 LHTMCLEKQLDDAYTLTMKARK 484
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 141/333 (42%), Gaps = 47/333 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N +I+ CK+ + A ++ D+M ++ D + LL +K
Sbjct: 412 MVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQ 471
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + + G+ D V+YG +I + ++ D A++L+ EM+ T + + T
Sbjct: 472 LDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNT 531
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I GL + +A+ + ++G P+ T N ++ YCW + A++ ++M +
Sbjct: 532 IIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHS 591
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T +I+L L + G E+ ++F K TV TY I++ FC +++ A
Sbjct: 592 LKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTV-TYNIIISSFCKERRLEDA 650
Query: 241 MRIWDEMKARGVLPVMH------------------------------------------- 257
+ EM+ + + P +
Sbjct: 651 FDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGT 710
Query: 258 ---MYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
MYS I+SLC + K DA K FQ+ G+
Sbjct: 711 SDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGV 743
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
P + + AY S + + +++ ++M++ PN T + +L+ L+++ + VF R
Sbjct: 139 PLLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSL--VFSR 196
Query: 211 M----SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ K G +P V+T+ I++ +C + + A+R+ ++M G P Y+T++ +L
Sbjct: 197 EVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTAL 256
Query: 267 CHEDKLDDACKYFQEMLDIGIRP 289
C +L +M + G+ P
Sbjct: 257 CKRSQLTQVRDLLLQMKNSGLFP 279
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 142/292 (48%), Gaps = 7/292 (2%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
ERA E+F ++K+ DP +K Y +L+ + + + VYR+MK DGFEP+V +Y ++
Sbjct: 127 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 186
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
+ A C + D A +L EM C P+ + T+I+ + + E G+ F
Sbjct: 187 LKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKE-----GRQLAERF 241
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
EP YNA++ C +M EM + GI PN +Y +++ L +G+ E A+S
Sbjct: 242 EPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFS 301
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLINS 265
+ +M ++ G P + T +V+ A+ +W++M + G+ P + Y+TL+
Sbjct: 302 LLAQMLKR-GCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQG 360
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
C +D A F M +IG P + + +L G E AV + K+
Sbjct: 361 FCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKM 412
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 151/355 (42%), Gaps = 32/355 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +FG + +N ++DTL ++ V+ MK+ F+P++ +Y +LL+ +
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195
Query: 61 LLSMNEVYREMKDDG------------------------------FEPDVVSYGIMINAH 90
+ ++ EM + G FEP V Y +IN
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGL 255
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
C + Y VEL EM P+ + TLIN L + ++ A Q KRG P
Sbjct: 256 CKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNI 315
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEM-RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
T +++V DA M ++M R G+ PN Y+ ++ G ++A SVF
Sbjct: 316 HTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFL 375
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M + G P + TY ++ F ++ A+ IW++M G P + +Y++++ +LC
Sbjct: 376 HM-EEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRH 434
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
K +A + M P F+ + L D G + A + +++++ + P
Sbjct: 435 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCP 489
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 136/289 (47%), Gaps = 4/289 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FGL+ + +N L+ C ++++A VF M++ P+I++Y L+ G+ ++ +L
Sbjct: 345 FGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEG 404
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ +M G P+VV Y M+ A C ++ EA L M NC PS F I
Sbjct: 405 AVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 464
Query: 124 GLGSEKRLSEALQFFGQSKKR-GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GL RL A + F Q +++ P TYN ++ + RI +AY + E+ G+
Sbjct: 465 GLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 524
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+T TY+ +LH AG A + +M G P T +++ +C + + A++
Sbjct: 525 WSTSTYNTLLHGSCNAGLPGIALQLVGKMMVN-GKSPDEITMNMIILAYCKQGKAERAVQ 583
Query: 243 IWDEMKA--RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ D + R P + Y+ +I LC + +D F+ M+ I P
Sbjct: 584 MLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 142/308 (46%), Gaps = 1/308 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ LI+ L S +E A + +M KR P+I + + L++G +
Sbjct: 275 GISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDA 334
Query: 65 NEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+++ +M + G +P+VV+Y ++ CS D+AV +F ME C P+ + +LIN
Sbjct: 335 LDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLIN 394
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G L A+ + + G P Y ++V A C + +A +++ M K P
Sbjct: 395 GFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAP 454
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ T++ + L AGR + A VF++M ++ P + TY ++ +++ A +
Sbjct: 455 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGL 514
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
E+ RGV Y+TL++ C+ A + +M+ G P + + A
Sbjct: 515 TREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCK 574
Query: 304 EGMEETAV 311
+G E AV
Sbjct: 575 QGKAERAV 582
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 6/235 (2%)
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
S+ + ++MK GF + +I+ + + AVE+F ++ C PS I+ ++
Sbjct: 93 SVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVL 152
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L E R+ + K+ GFEP TYN ++ A C + +++ A +++ EM G
Sbjct: 153 DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 212
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN +Y V+ + + G +E + +R EP VS Y ++ C +
Sbjct: 213 PNAVSYTTVISSMCEVGMVKEGRQLAERF------EPVVSVYNALINGLCKERDYKGGVE 266
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ EM +G+ P + YSTLIN L + +++ A +ML G P S+L
Sbjct: 267 LMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSL 321
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 108/245 (44%), Gaps = 7/245 (2%)
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F+ +++ +MI + D L ++M+ S +F ++I+ A+
Sbjct: 71 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 130
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + K+ G +P YN V+ RI Y + +M++ G PN TY+++L L
Sbjct: 131 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 190
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K + + A + MS K G P +Y V+ C V ++ + + PV
Sbjct: 191 CKNNKVDGAKKLLVEMSNK-GCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE-----PV 244
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV-VLA 314
+ +Y+ LIN LC E + EM++ GI P +S L L + G E A +LA
Sbjct: 245 VSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLA 304
Query: 315 QKIDK 319
Q + +
Sbjct: 305 QMLKR 309
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 146/306 (47%), Gaps = 4/306 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + F +I+ CK+ ++ A V M D+++Y +L+ ++
Sbjct: 294 GFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEA 353
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E EM +G P+VV Y +I+ +C + A+E+FR ME C+P+ + +LI G
Sbjct: 354 KETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYG 413
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +++L +A+ + ++ G P TY ++ C ++A+R+ + M + G+ P+
Sbjct: 414 LIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 473
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ Y+++ H L K+GR EEAYS R G T TY +V F D A +
Sbjct: 474 EQAYNVLTHALCKSGRAEEAYSFLVR----KGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 529
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++M G + YS L+ +LC + KL++A +M G++ ++ + + E
Sbjct: 530 EKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKE 589
Query: 305 GMEETA 310
G + A
Sbjct: 590 GKHDHA 595
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ + LI LC++R V A + M + ++ +YT+L++G ++
Sbjct: 151 MPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGR 210
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V EM G P V +Y MI+ +C + R +A+ + ME C P +
Sbjct: 211 IHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNI 270
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM---- 176
LI GL EK EA + + RGF P T+ ++ YC + RI+DA R+ M
Sbjct: 271 LIYGLCGEKP-DEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSN 329
Query: 177 ----------------RKC---------------GIGPNTRTYDIVLHHLIKAGRTEEAY 205
+KC G+ PN Y ++ K G+ A
Sbjct: 330 CKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAAL 389
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
VF+ M + G P TY ++ + ++ AM + +M+ G+ P + Y+TLI
Sbjct: 390 EVFRLMEHE-GCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQG 448
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQK---IDKLR 321
C + + D+A + F+ M G+ P Q ++ L AL G EE L +K + K+
Sbjct: 449 QCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVT 508
Query: 322 KTPLVD 327
T LVD
Sbjct: 509 YTSLVD 514
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 147/319 (46%), Gaps = 20/319 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL + +N L LCKS RA+E + + ++ +YT L++G+ + N
Sbjct: 465 MEQNGLTPDEQAYNVLTHALCKS---GRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGN 521
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +M ++G + D +Y +++ A C K+ +EA+ + +M + K + +
Sbjct: 522 TDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTI 581
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + E + A F + G +P A TY + +YC +I +A ++ EM + G
Sbjct: 582 IISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 641
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM- 239
+ P+ TY++ ++ G + A+S KRM EP TY I+++ F + VD
Sbjct: 642 VAPDVVTYNVFINGCGHMGYMDRAFSTLKRMI-DASCEPNYWTYWILLKHFLKMSLVDAH 700
Query: 240 -----AMRIWDE----------MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
M W E M G+ P YS++I C +L++AC F M
Sbjct: 701 YVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRG 760
Query: 285 IGIRPPGQLFSNLKQALRD 303
I P ++++ L + D
Sbjct: 761 KDISPNEEIYTMLIKCCCD 779
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 139/309 (44%), Gaps = 17/309 (5%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+D K+ + + A + +KM D +Y++LL+ +QK L + +M
Sbjct: 509 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMT 568
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + ++V+Y I+I+ ++D A +F EM ++ KPS + I+ ++
Sbjct: 569 LSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIE 628
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND-AYRMMDEMRKCGIGPNTRTYDIV 191
EA G+ ++ G P+ TYN + C M D A+ + M PN TY I+
Sbjct: 629 EAEHLIGEMERDGVAPDVVTYNVFING-CGHMGYMDRAFSTLKRMIDASCEPNYWTYWIL 687
Query: 192 LHHLIKAGRTEEAY-------------SVFKRMSR--KPGTEPTVSTYEIVVRMFCYNAQ 236
L H +K + Y +V++ + R K G PT TY ++ FC +
Sbjct: 688 LKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATR 747
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
++ A ++D M+ + + P +Y+ LI C A + +M++ G +P + +
Sbjct: 748 LEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHY 807
Query: 297 LKQALRDEG 305
L L DEG
Sbjct: 808 LIVGLCDEG 816
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 2/204 (0%)
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+A L M C+ + + + LI GL + + EAL + G TY ++
Sbjct: 143 KACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLI 202
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
C RI+ A R+++EM G+ P+ TY+ ++ K+GR ++A + M R G
Sbjct: 203 KGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERN-GC 261
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P TY I++ C + D A + ++ RG P + ++ +IN C +++DDA +
Sbjct: 262 NPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALR 320
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL 301
ML + Q + L L
Sbjct: 321 VKTSMLSSNCKLDLQAYGVLINVL 344
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL ++ +I CK+ +E A +FD M+ + P+ + YT+L++ K
Sbjct: 723 MVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKL 782
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+M + GF+P + SY +I C YD+A LF ++ +
Sbjct: 783 FGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWK 842
Query: 121 LIN-GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
++N GL + Q + R + ++ TY+ V
Sbjct: 843 ILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMV 879
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + N L+ L K V+ A E++ ++ + ++ + I++ + + + +
Sbjct: 57 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 116
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+M++ G PDVV+Y +INA+C +EA EL M KP + +ING
Sbjct: 117 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 176
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + A + K G P+ TYN ++ C + + DA R+ DEM G+ P+
Sbjct: 177 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 236
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++ ++ L K G ++A F+ M + G P Y I++ FC N + A+++
Sbjct: 237 LVSFSALIGLLSKNGCLDQALKYFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 295
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM +G + + Y+T++N LC E L +A + F EM + G+ P F+ L +
Sbjct: 296 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 355
Query: 305 GMEETAVVL 313
G AV L
Sbjct: 356 GNMNKAVTL 364
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L F+ LI L K+ +++A + F MK PD YTIL+ G+ + +
Sbjct: 232 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 291
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V EM + G DVV+Y ++N C K EA ELF EM P + F TLING
Sbjct: 292 LKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 351
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +++A+ F +R +P+ TYN ++ +C + + ++M I PN
Sbjct: 352 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 411
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+++ G EA+ ++ M K G E T+ T +V+ +C A
Sbjct: 412 HISYGILINGYCNMGCVSEAFRLWDEMVEK-GFEATIITCNTIVKGYCRAGNAVKADEFL 470
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M +G++P Y+TLIN E+ +D A +M + G+ P ++ + +
Sbjct: 471 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQ 530
Query: 305 G-MEETAVVLAQKIDK 319
G M+E +++ + I++
Sbjct: 531 GRMQEAELIMLKMIER 546
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 145/286 (50%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + +N +I+ LCK+ RA+ V D+M K PD +Y ILL + N
Sbjct: 158 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 217
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++ EM G PD+VS+ +I D+A++ FR+M+ P I+
Sbjct: 218 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 277
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G +SEAL+ + ++G + TYN ++ C +++A + EM + G
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ +++ K G +A ++F+ M ++ +P V TY ++ FC ++++
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKV 396
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+W++M +R + P Y LIN C+ + +A + + EM++ G
Sbjct: 397 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 140/285 (49%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +++ LCK + + A E+F +M +R PD ++T L+ G+ + N+
Sbjct: 302 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA 361
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M +PDVV+Y +I+ C ++ EL+ +M + P+ + LING
Sbjct: 362 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 421
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +SEA + + + ++GFE T N +V YC + A + M GI P+
Sbjct: 422 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 481
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ IK + A+++ +M G P V TY +++ F ++ A I
Sbjct: 482 GITYNTLINGFIKEENMDRAFALVNKM-ENSGLLPDVITYNVILNGFSRQGRMQEAELIM 540
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M RGV P Y++LIN ++ L +A + EML G P
Sbjct: 541 LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 137/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G+ ++ +N LI+ C+ +E A E+ D M + P + +Y ++ G +
Sbjct: 123 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 182
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V EM G PD +Y I++ C +A +F EM + P F
Sbjct: 183 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L L +AL++F K G P+ Y ++G +C + +++A ++ DEM + G
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY+ +L+ L K EA +F M+ + G P T+ ++ + + ++ A
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTER-GVFPDFYTFTTLINGYSKDGNMNKA 361
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +++ M R + P + Y+TLI+ C +++ + + +M+ I P
Sbjct: 362 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 410
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 13/277 (4%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
+ +L+ + Q + L E +R +K G + + ++ D A E+++E+
Sbjct: 30 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 89
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
+ + + + +IN L +++ F +++G P+ TYN ++ AYC +
Sbjct: 90 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
+A+ +MD M G+ P TY+ +++ L K G+ A V M K G P +TY I+
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM-LKIGMSPDTATYNIL 208
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ C N + A RI+DEM ++GV+P + +S LI L LD A KYF++M + G+
Sbjct: 209 LVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 268
Query: 288 RPPGQLFSNL----------KQAL--RDEGMEETAVV 312
P +++ L +AL RDE +E+ V+
Sbjct: 269 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 305
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
LK ++ +N LID CK +E+ E+++ M RR P+ SY IL+ G+ +
Sbjct: 373 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 432
Query: 66 EVYREMKDDGFE-----------------------------------PDVVSYGIMINAH 90
++ EM + GFE PD ++Y +IN
Sbjct: 433 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 492
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
+ D A L +ME + P + ++NG + R+ EA + +RG P+
Sbjct: 493 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 552
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
TY +++ + + +A+R+ DEM + G P+ +
Sbjct: 553 STYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + N ++ C++ + +A E M + PD +Y L+ G+ +++N+
Sbjct: 442 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 501
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M++ G PDV++Y +++N R EA + +M P + +LING
Sbjct: 502 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 561
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPE 149
++ L EA + + +RGF P+
Sbjct: 562 HVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
G N +D+++ ++A + E F R+ + G +++ ++ VD+A
Sbjct: 24 GSNPLVFDLLVRTYVQARKLREGCEAF-RVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
I+ E+ GV ++ + +IN+LC K+++ + +M + G+ P ++ L A
Sbjct: 83 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142
Query: 302 RDEGMEETAVVLAQKIDKLRKTPLV 326
+G+ E A L + P V
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCV 167
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL ++ +N +++ + ++ A+ + KM +R +PD +YT L+ G Q N
Sbjct: 508 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 567
Query: 61 LLSMNEVYREMKDDGFEPD 79
L V+ EM GF PD
Sbjct: 568 LKEAFRVHDEMLQRGFVPD 586
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 154/326 (47%), Gaps = 3/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFD--KMKKRRFDPDIKSYTILLEGWGQQ 58
+D+F ++ + FN +++ + + RA E ++ K P++ S+ ++++ +
Sbjct: 142 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 201
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ EV+REM EPDV +Y +++ C R DEAV L EM+ C PS F
Sbjct: 202 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 261
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LINGL + + + +G P TYN ++ C +++ A ++D M
Sbjct: 262 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
PN TY +++ L+K GR+ + + + + G Y ++ + +
Sbjct: 322 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER-GHHANEYAYSTLISGLFKEEKSE 380
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM +W +M +G P + +YS LI+ LC E KLD+A + EM++ G P +S+L
Sbjct: 381 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 440
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP 324
+ G + A+ + +++ K P
Sbjct: 441 KGFFKTGNSQKAIRVWKEMAKNNCVP 466
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 1/298 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+D LCK ++ A + D+M+ P ++ +L+ G ++ +++ + ++ M G
Sbjct: 229 LMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG 288
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P+ V+Y +IN C + D+AV L M A+ C P+ + TLINGL + R + +
Sbjct: 289 CVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGV 348
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
++RG Y+ ++ + +A + +M + G PN Y ++ L
Sbjct: 349 HLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 408
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ G+ +EA + M K G P TY +++ F A+R+W EM +P
Sbjct: 409 CREGKLDEAKEILCEMVNK-GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 467
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
YS LI+ LC + KL +A + ML G+RP +S++ L + G E + L
Sbjct: 468 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKL 525
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 150/309 (48%), Gaps = 6/309 (1%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D LK +P+ +N +I+ LC +++A + D+M + P+ +Y L+ G +
Sbjct: 281 VDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVK 340
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
Q + + +++ G + +Y +I+ ++ +EA+ L+++M C+P+ +
Sbjct: 341 QGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVV 400
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+GL E +L EA + + +G P A TY++++ + + A R+ EM
Sbjct: 401 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 460
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K PN Y +++H L + G+ EA ++ M + G P V Y ++ C V
Sbjct: 461 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGR-GLRPDVVAYSSMIHGLCNAGSV 519
Query: 238 DMAMRIWDEM--KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
++ +++++EM + P + Y+ L+ +LC ++ + A MLD G P +
Sbjct: 520 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCN 579
Query: 296 NLKQALRDE 304
ALR++
Sbjct: 580 IFLNALREK 588
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 156/316 (49%), Gaps = 6/316 (1%)
Query: 13 FNRLIDTLCKSRH---VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
++R I LC + + + + M F PDI ++ L +Q L + E++
Sbjct: 84 YSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFH 143
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
M G +PDVVSY I+I+A C+AKR+DEA +++R + P L+ GL S
Sbjct: 144 SMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGG 203
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R+ A + K G + + YNA++ +C R++ A ++ M + G P+ TY+
Sbjct: 204 RVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYN 263
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA-MRIWDEMK 248
I+L++ + G +EA + + M R G EP + +Y +++ FC VD A + + + M+
Sbjct: 264 ILLNYCCEEGMVDEAVRLVETMERS-GVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQ 322
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+G+ V+ Y+T+I + C + + F+EM GIRP F+ L A EG
Sbjct: 323 TKGMCDVVS-YNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTH 381
Query: 309 TAVVLAQKIDKLRKTP 324
L ++ K+R P
Sbjct: 382 VVKKLLDEMTKMRVLP 397
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 145/324 (44%), Gaps = 36/324 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD G ++ FN ++ LC+ +E A E+F M + DPD+ SYTI+++ K
Sbjct: 110 MDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKR 169
Query: 61 LLSMNEVYREMKDDGFEPDV-----------------------------------VSYGI 85
+V+R + D G PD + Y
Sbjct: 170 FDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNA 229
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ C R D+A+++ M T C P + L+N E + EA++ ++ G
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
EP+ +YN ++ +C + ++ A+ MM E + + +Y+ V+ KA RT + Y
Sbjct: 290 VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGY 349
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ M K G P + T+ I++ F + ++ DEM VLP Y+ +++
Sbjct: 350 ELFEEMCGK-GIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDH 408
Query: 266 LCHEDKLDDACKYFQEMLDIGIRP 289
LC K+D A F++M++ G+ P
Sbjct: 409 LCKNGKVDVAHSVFRDMVENGVNP 432
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 1/302 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+K +N LID C+ V++A ++ M + PD+ +Y ILL ++ +
Sbjct: 217 KGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVD 276
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ M+ G EPD+ SY ++ C A D A + E T + T+I
Sbjct: 277 EAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVI 336
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+R + + F + +G P+ T+N ++ A+ + +++DEM K +
Sbjct: 337 TAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVL 396
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ Y V+ HL K G+ + A+SVF+ M G P V +Y ++ FC ++V AM
Sbjct: 397 PDCIFYTAVVDHLCKNGKVDVAHSVFRDMVEN-GVNPDVISYNALLNGFCKTSRVMDAMH 455
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++DEM+++G+ P Y ++ L K+ AC+ + +M++ G L L A++
Sbjct: 456 LFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAIQ 515
Query: 303 DE 304
Sbjct: 516 SS 517
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 1/270 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G +L +N L++ C+ V+ A + + M++ +PD+ SY LL+G+ +
Sbjct: 250 MSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + E DVVSY +I A C A+R + ELF EM +P F
Sbjct: 310 VDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ E + + K P+ Y AVV C + +++ A+ + +M + G
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y+ +L+ K R +A +F M K G P TY+++V ++ +A
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSK-GLYPDEVTYKLIVGGLIRGKKISLA 488
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHED 270
R+WD+M RG H+ TL+N++ D
Sbjct: 489 CRVWDQMMERGFTLNRHLSETLVNAIQSSD 518
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 166/323 (51%), Gaps = 15/323 (4%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+F + +F L+ LC+ ++V+ A+ + K F + KS+ I+L GW N++
Sbjct: 227 RFKFDLGIDEFQSLLSALCRYKNVQDAEHLMF-CNKDVFPFNTKSFNIVLNGWC---NVI 282
Query: 63 S----MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ ++REM DVVSY +I+ + A + +L+ +M+ +P I+
Sbjct: 283 GSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDRKIY 342
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++I L + +SEA+ +++G P TYN+++ C + +I++A + DEM +
Sbjct: 343 NSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQ 402
Query: 179 CGIGPNTRTYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G P RTY H ++ RT EE +++ + M RK G PT+ TY +++R FC Q
Sbjct: 403 HGHSPTIRTY----HAFFRSLRTGEEVFALLENM-RKLGCHPTIDTYIMLIRKFCRWRQF 457
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D ++W+++ G+ P Y LI+ L KL++A K++ +M + + P +L L
Sbjct: 458 DDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYADMKEKQLLPDPKLDEML 517
Query: 298 KQALRDEGMEETAVVLAQKIDKL 320
+ L ++ + E + K+D+L
Sbjct: 518 QTWLSNKQVAECQMT-ESKVDQL 539
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K + ++ + +I K+ ++ + +++++MK+ +PD K Y ++ + ++
Sbjct: 295 MCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDRKIYNSVIFALAKGRH 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + M++ G P+ V+Y +I C A++ DEA LF EM P+ +
Sbjct: 355 VSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHA 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L + + E +K G P TY ++ +C + +D +++ +++ + G
Sbjct: 415 FFRSLRTGE---EVFALLENMRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENG 471
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+GP+ +Y +++H L G+ EEAY + M K
Sbjct: 472 LGPDRSSYIVLIHGLFLNGKLEEAYKFYADMKEK 505
>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
Length = 654
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 147/318 (46%), Gaps = 4/318 (1%)
Query: 1 MDKFGLKQELPD--FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
M++ G+ ++P + +I LCK VF++M KR + YT L++ G+
Sbjct: 316 MEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKF 375
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ MKD G + D V+YG+++N C + DEAV FR + + +
Sbjct: 376 GREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFY 435
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI+G G + ++ + F + +GF P++ YN ++ S R++DA + M
Sbjct: 436 TSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMED 495
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G TY I++ L K + EEA + M K G PT + + + C + +
Sbjct: 496 DGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDK-GITPTAAAFRTLASGLCLSGKFS 554
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A RI DE+ GV+P + +IN LC + ACK ++ G PG++ + +
Sbjct: 555 RACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQACKLADGIVQKGREIPGRVRTMMI 613
Query: 299 QALRDEGMEETAVVLAQK 316
ALR G + AV L
Sbjct: 614 NALRKAGNTDLAVKLVHS 631
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 5/307 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK-DD 74
LI +L E + M+ +P Y LL+G L + V+ M +D
Sbjct: 189 LIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTED 248
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSE 133
PDVVSY I+I +C A R +A+ EM E P + TL+ SE
Sbjct: 249 QVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPV 308
Query: 134 ALQFFGQSKKRGFEPEAP--TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ F + ++RG + P Y V+GA C + + + + M K G N Y +
Sbjct: 309 CIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 368
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ + K GR +EA ++F+RM + G + TY ++V C ++D A+ + + +G
Sbjct: 369 IDSMGKFGREKEAMALFERM-KDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKG 427
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ Y++LI+ +D + + F+EM+ G P ++ L L G + A
Sbjct: 428 IAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDAC 487
Query: 312 VLAQKID 318
L ++++
Sbjct: 488 ALYKRME 494
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+P +LI L + E L + + G EP YN ++ + ++ A +
Sbjct: 182 TPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVF 241
Query: 174 DEMR-KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
D M + + P+ +Y+I++ +AGR +A + M + P TY +++
Sbjct: 242 DAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHY 301
Query: 233 YNAQVDMAMRIWDEMKARGV---LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + ++ EM+ RG+ +P H Y +I +LC + K + F+ ML G
Sbjct: 302 SEGTFPVCIGLFQEMEERGMGNDIP-QHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAA 360
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKI 317
+++ L ++ G E+ A+ L +++
Sbjct: 361 NAAIYTALIDSMGKFGREKEAMALFERM 388
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 154/326 (47%), Gaps = 3/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFD--KMKKRRFDPDIKSYTILLEGWGQQ 58
+D+F ++ + FN +++ + + RA E ++ K P++ S+ ++++ +
Sbjct: 126 VDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKL 185
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ EV+REM EPDV +Y +++ C R DEAV L EM+ C PS F
Sbjct: 186 GLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTF 245
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LINGL + + + +G P TYN ++ C +++ A ++D M
Sbjct: 246 NVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
PN TY +++ L+K GR+ + + + + G Y ++ + +
Sbjct: 306 SKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER-GHHANEYAYSTLISGLFKEEKSE 364
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM +W +M +G P + +YS LI+ LC E KLD+A + EM++ G P +S+L
Sbjct: 365 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 424
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP 324
+ G + A+ + +++ K P
Sbjct: 425 KGFFKTGNSQKAIRVWKEMAKNNCVP 450
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 1/298 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+D LCK ++ A + D+M+ P ++ +L+ G ++ +++ + ++ M G
Sbjct: 213 LMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKG 272
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P+ V+Y +IN C + D+AV L M A+ C P+ + TLINGL + R + +
Sbjct: 273 CVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGV 332
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
++RG Y+ ++ + +A + +M + G PN Y ++ L
Sbjct: 333 HLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 392
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ G+ +EA + M K G P TY +++ F A+R+W EM +P
Sbjct: 393 CREGKLDEAKEILCEMVNK-GCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPN 451
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
YS LI+ LC + KL +A + ML G+RP +S++ L + G E + L
Sbjct: 452 EICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKL 509
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 150/309 (48%), Gaps = 6/309 (1%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D LK +P+ +N +I+ LC +++A + D+M + P+ +Y L+ G +
Sbjct: 265 VDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVK 324
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
Q + + +++ G + +Y +I+ ++ +EA+ L+++M C+P+ +
Sbjct: 325 QGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVV 384
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+GL E +L EA + + +G P A TY++++ + + A R+ EM
Sbjct: 385 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 444
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K PN Y +++H L + G+ EA ++ M + G P V Y ++ C V
Sbjct: 445 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGR-GLRPDVVAYSSMIHGLCNAGSV 503
Query: 238 DMAMRIWDEM--KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
++ +++++EM + P + Y+ L+ +LC ++ + A MLD G P +
Sbjct: 504 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCN 563
Query: 296 NLKQALRDE 304
ALR++
Sbjct: 564 IFLNALREK 572
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 142/302 (47%), Gaps = 2/302 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + + N I LC+ ++ A+++FD M + P+I SY+ LL G+ +
Sbjct: 253 MSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGC 312
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+MN + M G P+ + I+INA+ D+A+ +F +M+ P F T
Sbjct: 313 FANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 372
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L RL +AL F G P Y ++ C + A ++ EM
Sbjct: 373 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD 432
Query: 181 I-GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I P + + ++++L K GR E + M + G P V T+ ++ +C ++
Sbjct: 433 IPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQT-GQRPNVVTFNSLMEGYCLVGNMEE 491
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + D M + G+ P ++Y TL++ C ++DDA F++ML G++P L++ +
Sbjct: 492 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILH 551
Query: 300 AL 301
L
Sbjct: 552 GL 553
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 149/302 (49%), Gaps = 2/302 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ +N LID K V++A E+F KM ++ PD+ +Y L++G + K ++
Sbjct: 152 GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 211
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V +M D G P+ +Y +I + +A + E+V +F+EM ++ P + I+
Sbjct: 212 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 271
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ EA F +G +P +Y+ ++ Y + +++ M GI PN
Sbjct: 272 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 331
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
R ++I+++ + G ++A +F+ M K G P T+ V+ C ++D A+ +
Sbjct: 332 HRFFNILINAYARCGMMDKAMLIFEDMQNK-GMIPDTVTFATVISSLCRIGRLDDALHKF 390
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG-QLFSNLKQALRD 303
+ M GV P +Y LI C+ +L A + EM++ I PPG + FS++ L
Sbjct: 391 NHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFK 450
Query: 304 EG 305
EG
Sbjct: 451 EG 452
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID + E A VF ++ + PD+ SY L++G+ ++ + E++ +M
Sbjct: 125 YNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMI 184
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ PDVV+Y +I+ C K ++ + +M +P+ + +LI G +
Sbjct: 185 EQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWK 244
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E+++ F + G P N+ + A C RI +A + D M G PN +Y +L
Sbjct: 245 ESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLL 304
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H G S+ M K G P + I++ + +D AM I+++M+ +G+
Sbjct: 305 HGYAAEGCFANMNSLVNLMVSK-GIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGM 363
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+P ++T+I+SLC +LDDA F M+DIG+ P ++ L Q + G
Sbjct: 364 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHG 416
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 137/293 (46%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ +I+ L K V +++ D M + P++ ++ L+EG+ N+ + M
Sbjct: 441 FSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 500
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP+ YG +++ +C R D+A+ +FR+M KP+ ++ +++GL +R +
Sbjct: 501 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTT 560
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F + + G TY V+G C + ++A +++++ + + T++IV+
Sbjct: 561 AAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 620
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
++K GR +EA +F +S G PTV TY +++ + A ++ ++ G
Sbjct: 621 SAMLKVGRRQEAKELFAAISTY-GLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGR 679
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + + ++ L + ++ A Y + + + S L EG
Sbjct: 680 APDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREG 732
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 138/325 (42%), Gaps = 2/325 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + F +I +LC+ ++ A F+ M P Y L++G
Sbjct: 358 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGE 417
Query: 61 LLSMNEVYREMKDDGFEPDVVSY-GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L+ E+ EM + P V Y +IN R E ++ M T +P+ F
Sbjct: 418 LVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFN 477
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+L+ G + EA G EP Y +V YC + RI+DA + +M
Sbjct: 478 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 537
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P + Y+I+LH L +A RT A +F M GT ++ TY +V+ C N D
Sbjct: 538 GVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES-GTTVSIQTYGVVLGGLCRNNCTDE 596
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + +++ A V + ++ +I+++ + +A + F + G+ P ++ +
Sbjct: 597 ANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMIS 656
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
L E E A L ++K + P
Sbjct: 657 NLIKEESYEEADNLFISVEKSGRAP 681
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 135/287 (47%), Gaps = 2/287 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDP-DIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
LI C + +A+E+ +M + P +K ++ ++ ++ + ++ M
Sbjct: 408 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQT 467
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G P+VV++ ++ +C +EA L M + +P+ +I+ TL++G R+ +A
Sbjct: 468 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 527
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L F +G +P + YN ++ + R A +M EM + G + +TY +VL
Sbjct: 528 LTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGG 587
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L + T+EA + +++ + + T+ IV+ + A ++ + G++P
Sbjct: 588 LCRNNCTDEANMLLEKLFAM-NVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVP 646
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+H Y+ +I++L E+ ++A F + G P +L +++ + L
Sbjct: 647 TVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRML 693
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + +Y I+I+ + R + A+ +F + T P + TLI+G E + +A +
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + ++ P+ TYN+++ C + + + R++++M GI PN +TY+ +++
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
AG +E+ VFK MS G P V + C + ++ A I+D M +G P +
Sbjct: 240 AGMWKESVRVFKEMSSS-GLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
YSTL++ E + M+ GI P + F+ L A GM + A+++
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLI 354
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 4/249 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + FN L++ C ++E A + D M +P+ Y L++G+ +
Sbjct: 464 MVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGR 523
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+R+M G +P V Y I+++ A+R A ++F EM + S +
Sbjct: 524 IDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGV 583
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL EA + + + T+N V+ A R +A + + G
Sbjct: 584 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYG 643
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY++++ +LIK EEA ++F + K G P +VRM A+V A
Sbjct: 644 LVPTVHTYNLMISNLIKEESYEEADNLFISV-EKSGRAPDSRLLNHIVRMLLKKAEVAKA 702
Query: 241 ---MRIWDE 246
+ I DE
Sbjct: 703 SNYLSIIDE 711
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P TY+I++ + R E A +VF R+ R G P V +Y ++ F +VD A
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVFGRLLRT-GLGPDVCSYNTLIDGFSKEGEVDKAY 177
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ +M + V P + Y++LI+ LC ++ + + ++M+D GIRP + +++L
Sbjct: 178 ELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGY 237
Query: 302 RDEGMEETAVVLAQKIDKLRKTPLV 326
GM + +V + +++ P V
Sbjct: 238 STAGMWKESVRVFKEMSSSGLIPCV 262
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/160 (17%), Positives = 66/160 (41%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + ++ LC++ + A + +K+ DI ++ I++ +
Sbjct: 569 MIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGR 628
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E++ + G P V +Y +MI+ + Y+EA LF +E + P +
Sbjct: 629 RQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNH 688
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
++ L + +++A + + EA T + + +
Sbjct: 689 IVRMLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLF 728
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 167/329 (50%), Gaps = 7/329 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M++ GL + + LID CK+ +ER +++F KM + + +YT+L+ G+ G
Sbjct: 177 MEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGL 236
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+K+ + E+Y +MK G P+V +Y MI C+ + + A ELF EM +
Sbjct: 237 KKDGI---ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVT 293
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TLI GL E+R+ EA + + K+ G P +YN ++ YC ++ A + ++M+
Sbjct: 294 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMK 353
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G P+ TY+I++ +A + + + M + G P+ TY I++ + +
Sbjct: 354 SSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR-GLSPSKVTYTILMDALVRSDNI 412
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ A +I+ M+ G++ +++Y LI+ LC + +A K F+ + ++ ++P +++ +
Sbjct: 413 EKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTM 472
Query: 298 KQALRDEGMEETAVVLAQKIDKLRKTPLV 326
EG A+ L +++ + P V
Sbjct: 473 IYGYCKEGSSYRALRLLKEMGENGMVPNV 501
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 147/299 (49%), Gaps = 1/299 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I C + A E+FD+M++R ++ +Y L+ G Q++ +L
Sbjct: 251 GIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA 310
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ MK DG P+++SY +I+ +CS D+A LF +M+++ PS + LI G
Sbjct: 311 ERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAG 370
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + + + RG P TY ++ A S I A+++ M K G+ +
Sbjct: 371 FSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVAD 430
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y +++H L G +EA +FK + +P Y ++ +C A+R+
Sbjct: 431 IYIYGVLIHGLCVVGDMKEASKLFKSLDEMH-LKPNDVIYNTMIYGYCKEGSSYRALRLL 489
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM G++P + Y++ I LC ++K +A ++M+++G++P +++ + +A D
Sbjct: 490 KEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFD 548
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 160/322 (49%), Gaps = 1/322 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K +K ++ F +I C+ ++++ EV +M++ P++ YT L++G + ++
Sbjct: 144 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 203
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+++ +M + + +Y ++IN + +EL+ +M+ T P+ + + ++I
Sbjct: 204 RGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 263
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
++ +L+ A + F + ++RG TYN ++G C R+ +A R+M M++ G+
Sbjct: 264 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 323
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN +Y+ ++ G ++A S+F +M + G P+++TY I++ F
Sbjct: 324 PNLISYNTLIDGYCSIGNLDKASSLFNQM-KSSGQSPSLATYNILIAGFSEAKNSAGVTD 382
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ EM+ARG+ P Y+ L+++L D ++ A + + M G+ ++ L L
Sbjct: 383 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 442
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
G + A L + +D++ P
Sbjct: 443 VVGDMKEASKLFKSLDEMHLKP 464
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 144/306 (47%), Gaps = 3/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL FN L+ L KS E+A VF++ K D+ S+ I+++G + L
Sbjct: 112 GLVPGSNTFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKG 170
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV +M++ G P+VV Y +I+ C + +LF +M + + + + LING
Sbjct: 171 FEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLING 230
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ + + K G P TYN+++ C ++N+A+ + DEMR+ G+ N
Sbjct: 231 FFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACN 290
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L + R EA + RM R G P + +Y ++ +C +D A ++
Sbjct: 291 VVTYNTLIGGLCQERRVLEAERLMCRMKRD-GLSPNLISYNTLIDGYCSIGNLDKASSLF 349
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RD 303
++MK+ G P + Y+ LI +EM G+ P ++ L AL R
Sbjct: 350 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 409
Query: 304 EGMEET 309
+ +E+
Sbjct: 410 DNIEKA 415
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL L +N LID C ++++A +F++MK P + +Y IL+ G+ + KN
Sbjct: 317 MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKN 376
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ REM+ G P V+Y I+++A + ++A +++ ME +I+
Sbjct: 377 SAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGV 436
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + EA + F + +P YN ++ YC A R++ EM + G
Sbjct: 437 LIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG 496
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ PN +Y+ + L K + EA + K M + G +P++S + ++ +
Sbjct: 497 MVPNVASYNSTIXILCKDEKWTEAEVLLKDMI-ELGLKPSISIWNMISK 544
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 105/251 (41%), Gaps = 37/251 (14%)
Query: 74 DGFEPDVVSYGIMINAHCSAKR-----------------------------------YDE 98
D F V+ + +INAH ++ +++
Sbjct: 76 DSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 135
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
A +F E + N K + F +I G L + + GQ ++ G P Y ++
Sbjct: 136 AWRVFNETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLID 194
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
C + I ++ +M + + N TY ++++ K G ++ ++++M + G
Sbjct: 195 GCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM-KLTGIV 253
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V TY ++ C + +++ A ++DEM+ RGV + Y+TLI LC E ++ +A +
Sbjct: 254 PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERL 313
Query: 279 FQEMLDIGIRP 289
M G+ P
Sbjct: 314 MCRMKRDGLSP 324
>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 657
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 147/318 (46%), Gaps = 4/318 (1%)
Query: 1 MDKFGLKQELPD--FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
M++ G+ ++P + +I LCK VF++M KR + YT L++ G+
Sbjct: 319 MEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKF 378
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ MKD G + D V+YG+++N C + DEAV FR + + +
Sbjct: 379 GREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFY 438
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI+G G + ++ + F + +GF P++ YN ++ S R++DA + M
Sbjct: 439 TSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMED 498
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G TY I++ L K + EEA + M K G PT + + + C + +
Sbjct: 499 DGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDK-GITPTAAAFRTLASGLCLSGKFS 557
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A RI DE+ GV+P + +IN LC + ACK ++ G PG++ + +
Sbjct: 558 RACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQACKLADGIVQKGREIPGRVRTMMI 616
Query: 299 QALRDEGMEETAVVLAQK 316
ALR G + AV L
Sbjct: 617 NALRKAGNTDLAVKLVHS 634
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 5/307 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK-DD 74
LI +L E + M+ +P Y LL+G L + V+ M +D
Sbjct: 192 LIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTED 251
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSE 133
PDVVSY I+I +C A R +A+ EM E P + TL+ SE
Sbjct: 252 QVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPV 311
Query: 134 ALQFFGQSKKRGFEPEAP--TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ F + ++RG + P Y V+GA C + + + + M K G N Y +
Sbjct: 312 CIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 371
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ + K GR +EA ++F+RM + G + TY ++V C ++D A+ + + +G
Sbjct: 372 IDSMGKFGREKEAMALFERM-KDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKG 430
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ Y++LI+ +D + + F+EM+ G P ++ L L G + A
Sbjct: 431 IAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDAC 490
Query: 312 VLAQKID 318
L ++++
Sbjct: 491 ALYKRME 497
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+P +LI L + E L + + G EP YN ++ + ++ A +
Sbjct: 185 TPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVF 244
Query: 174 DEMR-KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
D M + + P+ +Y+I++ +AGR +A + M + P TY +++
Sbjct: 245 DAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHY 304
Query: 233 YNAQVDMAMRIWDEMKARGV---LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + ++ EM+ RG+ +P H Y +I +LC + K + F+ ML G
Sbjct: 305 SEGTFPVCIGLFQEMEERGMGNDIP-QHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAA 363
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKI 317
+++ L ++ G E+ A+ L +++
Sbjct: 364 NAAIYTALIDSMGKFGREKEAMALFERM 391
>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
Length = 658
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 147/318 (46%), Gaps = 4/318 (1%)
Query: 1 MDKFGLKQELPD--FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
M++ G+ ++P + +I LCK VF++M KR + YT L++ G+
Sbjct: 320 MEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKF 379
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ MKD G + D V+YG+++N C + DEAV FR + + +
Sbjct: 380 GREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFY 439
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI+G G + ++ + F + +GF P++ YN ++ S R++DA + M
Sbjct: 440 TSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMED 499
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G TY I++ L K + EEA + M K G PT + + + C + +
Sbjct: 500 DGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDK-GITPTAAAFRTLASGLCLSGKFS 558
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A RI DE+ GV+P + +IN LC + ACK ++ G PG++ + +
Sbjct: 559 RACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQACKLADGIVQKGREIPGRVRTMMI 617
Query: 299 QALRDEGMEETAVVLAQK 316
ALR G + AV L
Sbjct: 618 NALRKAGNTDLAVKLVHS 635
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 5/307 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK-DD 74
LI +L E + M+ +P Y LL+G L + V+ M +D
Sbjct: 193 LIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVFDAMSTED 252
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSE 133
PDVVSY I+I +C A R +A+ EM E P + TL+ SE
Sbjct: 253 QVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPV 312
Query: 134 ALQFFGQSKKRGFEPEAP--TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ F + ++RG + P Y V+GA C + + + + M K G N Y +
Sbjct: 313 CIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 372
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ + K GR +EA ++F+RM + G + TY ++V C ++D A+ + + +G
Sbjct: 373 IDSMGKFGREKEAMALFERM-KDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKG 431
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ Y++LI+ +D + + F+EM+ G P ++ L L G + A
Sbjct: 432 IAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDAC 491
Query: 312 VLAQKID 318
L ++++
Sbjct: 492 ALYKRME 498
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 5/208 (2%)
Query: 114 SPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
+P +LI L + E L + + G EP YN ++ + ++ A +
Sbjct: 186 TPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNCLLDGLVNAGLLDTAVNVF 245
Query: 174 DEMR-KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
D M + + P+ +Y+I++ +AGR +A + M + P TY +++
Sbjct: 246 DAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHY 305
Query: 233 YNAQVDMAMRIWDEMKARGV---LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + ++ EM+ RG+ +P H Y +I +LC + K + F+ ML G
Sbjct: 306 SEGTFPVCIGLFQEMEERGMGNDIP-QHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAA 364
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKI 317
+++ L ++ G E+ A+ L +++
Sbjct: 365 NAAIYTALIDSMGKFGREKEAMALFERM 392
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 136/279 (48%), Gaps = 4/279 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
VE+A V ++M R PD SYT+ +E +V+ M + G +PD+ +YGI
Sbjct: 319 VEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGI 378
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ C A + R M+ KP+ +I+ +++G RL EAL+ + + K G
Sbjct: 379 IIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG 438
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P TYN V+ A C ++++A ++ EM RK + P+ TY +++H L K G E
Sbjct: 439 ILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEER 498
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A+ + M G P TY +++ +V AM + +EM G+ P H Y TL+
Sbjct: 499 AFDLLAEMIDN-GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 557
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
LC D +D A QEM+ G P F +++ R
Sbjct: 558 QILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAVEKGFR 595
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 153/312 (49%), Gaps = 6/312 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ LC R +++A F+ + + +P + +YT+L++G +
Sbjct: 154 MKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHK 213
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ EM G++PD+++Y +I+ A R DEA +L M A P+ + +
Sbjct: 214 VERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTS 273
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL R+ EA++ + ++R P TY+ +V Y ++ A+ +M+EM
Sbjct: 274 IVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRD 333
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+T +Y + + L GR EEA VF+ M K G +P + TY I++ FC + A
Sbjct: 334 CAPDTISYTMFIEALYSIGRREEAEKVFETMVEK-GCKPDMHTYGIIIDNFCKEGSMAAA 392
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M V P ++Y+ +++ +L++A + +Q +L GI P ++ + A
Sbjct: 393 THVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINA 452
Query: 301 L-----RDEGME 307
L DE +E
Sbjct: 453 LCKLKKMDEALE 464
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 4/320 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G L N L+ L + H+ A F +P++ S+ ILL G+ + + +
Sbjct: 91 GFSHTLFTRNSLLLALVRGGHLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVV 147
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N + REMK G + ++G++++A C+ + D+AV F + C+P+ + L++G
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDG 207
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ A F + ++G++P+ Y++++ + R+++A +++D M G P
Sbjct: 208 LCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPT 267
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ L K GR +EA + M R+ P V TY +V + +V+ A +
Sbjct: 268 AVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR-LRPRVDTYSFIVTGYIGMGKVEKAFAVM 326
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+EM R P Y+ I +L + ++A K F+ M++ G +P + + E
Sbjct: 327 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKE 386
Query: 305 GMEETAVVLAQKIDKLRKTP 324
G A + + +DK P
Sbjct: 387 GSMAAATHVLRLMDKAAVKP 406
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 1/290 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++ LCK ++ A + +M++RR P + +Y+ ++ G+ + V EM
Sbjct: 271 YTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMA 330
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D PD +SY + I A S R +EA ++F M CKP H + +I+ E ++
Sbjct: 331 DRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMA 390
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A K +P Y ++ + S R+ +A + + K GI P+T TY+ V+
Sbjct: 391 AATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVI 450
Query: 193 HHLIKAGRTEEAYSVFKRMS-RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K + +EA + + M RK EP++ TY +++ + A + EM G
Sbjct: 451 NALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNG 510
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
V+P Y++LI +L K+ A + +EML GI P + L Q L
Sbjct: 511 VIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQIL 560
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 38/347 (10%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L + L+D LCK+ VERA +VF++M ++ + PDI +Y+ L++G + + ++
Sbjct: 198 LFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVD 257
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-------------------- 109
M G P V+Y ++ C R EAV+ +EM
Sbjct: 258 LMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMG 317
Query: 110 ---------------NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+C P + I L S R EA + F ++G +P+ TY
Sbjct: 318 KVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYG 377
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ +C + A ++ M K + PN Y +++ +K+ R EEA +++R+ K
Sbjct: 378 IIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRI-LK 436
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG--VLPVMHMYSTLINSLCHEDKL 272
G P+ TY V+ C ++D A+ + EM+ R + P + YS +I+ L
Sbjct: 437 DGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGME 496
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ A EM+D G+ P +++L Q L G A+ L +++ K
Sbjct: 497 ERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLK 543
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 112/229 (48%), Gaps = 4/229 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ + +ID CK + A V M K P+ YT++++G+ + L
Sbjct: 368 GCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEA 427
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME--ATNCKPSPHIFCTLI 122
E+Y+ + DG P V+Y +INA C K+ DEA+EL REM+ +PS + +I
Sbjct: 428 LELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMII 487
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GLG A + G P+ TY +++ + +++ A +++EM K GI
Sbjct: 488 HGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIF 547
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
P+ TY ++ L ++ + A+ + + M R G P T++ V + F
Sbjct: 548 PDDHTYGTLVQILCRSD-VDAAWDLLQEMMRN-GHTPNEFTFKAVEKGF 594
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK +K + ++D KS +E A E++ ++ K P +Y ++ + K
Sbjct: 399 MDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKK 458
Query: 61 LLSMNEVYREM--KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ E+ REM + + EP +V+Y ++I+ + A +L EM P +
Sbjct: 459 MDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTY 518
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI L ++S A++ + K G P+ TY +V C S ++ A+ ++ EM +
Sbjct: 519 TSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMR 577
Query: 179 CGIGPNTRTYDIV 191
G PN T+ V
Sbjct: 578 NGHTPNEFTFKAV 590
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 4/208 (1%)
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+L+ L LS+AL FF S EP ++N ++ + ++ EM+
Sbjct: 101 SLLLALVRGGHLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKSR 157
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GI N T+ ++L L ++A S F +S EPT+ TY ++V C +V+
Sbjct: 158 GITSNGATHGVILSALCARRDLDKAVSYFNSVSPNK-CEPTLFTYTVLVDGLCKAHKVER 216
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A +++EM +G P + YS+LI+ L ++D+A K M+ G P ++++
Sbjct: 217 ACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVA 276
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLVD 327
L G + AV Q++ + R P VD
Sbjct: 277 GLCKCGRIQEAVKTIQEMRRRRLRPRVD 304
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 157/319 (49%), Gaps = 3/319 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ L +N LI CK R E+ + + M + +PDI SY L+ + NLL
Sbjct: 144 GMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDA 203
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFCTLIN 123
E++ EM G PDV+ Y I+I+ + +A E++ R + ++ PS + +IN
Sbjct: 204 VELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMIN 263
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL +L E+++ + + KK P+ T+++++ + N A ++ EM + G+ P
Sbjct: 264 GLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSP 323
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ RTY+ +L L + G+ + + ++ MS+ + +Y ++++ N +V+ A+
Sbjct: 324 DVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC--NIVSYNMLIQGLLDNKKVEQAICY 381
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
W + RG+ Y LIN LC L+ A + +E + G +S++ L
Sbjct: 382 WQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCK 441
Query: 304 EGMEETAVVLAQKIDKLRK 322
+GM E AV L ++ K R+
Sbjct: 442 KGMLEQAVELIHQMKKNRR 460
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 161/317 (50%), Gaps = 9/317 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I+ LCK ++ + E++++MKK PD+ +++ ++ G + N + +V++EM
Sbjct: 258 YNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMI 317
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G PDV +Y M++ + ++ EL+ M NC + LI GL K++
Sbjct: 318 ESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVS-YNMLIQGLLDNKKVE 376
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ ++ +RG + ++ TY ++ C + +N A R+++E G +T Y ++
Sbjct: 377 QAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMV 436
Query: 193 HHLIKAGRTEEAYSVFKRMS---RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
H L K G E+A + +M RK + S VR F +++ A+ + EMK+
Sbjct: 437 HGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAF----KLEEAISVLREMKS 492
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEE 308
+ P + Y+T+IN LC ++ DA +EML+ G++P +S L L R E ++
Sbjct: 493 KDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDM 552
Query: 309 TAVVLAQKIDKLRKTPL 325
+ Q I+K K L
Sbjct: 553 ALNLWHQCINKRLKPDL 569
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 159/311 (51%), Gaps = 4/311 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ + LI+ L KS ++ A E+FD+M R +PD+ Y IL++G+ ++ + +
Sbjct: 179 GLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKA 238
Query: 65 NEVY-REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
NE++ R + + P V +Y IMIN C + DE++E++ M+ P F ++I+
Sbjct: 239 NEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIH 298
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL + A + F + + G P+ TYNA++ + ++N + + + M K
Sbjct: 299 GLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC- 357
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N +Y++++ L+ + E+A ++ + + G + +TY +++ C N ++ A+RI
Sbjct: 358 NIVSYNMLIQGLLDNKKVEQAICYWQLLHER-GLKADSTTYGLLINGLCKNGYLNKALRI 416
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LR 302
+E + G YS++++ LC + L+ A + +M + +F++L +R
Sbjct: 417 LEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVR 476
Query: 303 DEGMEETAVVL 313
+EE VL
Sbjct: 477 AFKLEEAISVL 487
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 152/300 (50%), Gaps = 1/300 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + + LI+ LCK+ ++ +A + ++ + D D +Y+ ++ G ++ L
Sbjct: 389 GLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQA 448
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ +MK + + + + +IN + A + +EA+ + REM++ +C P+ + T+ING
Sbjct: 449 VELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIING 508
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +R S+A + + G +P+ TY+ ++ C +++ A + + + P+
Sbjct: 509 LCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPD 568
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ ++I++H L A + + A +F +M R+ P + T+ ++ A++IW
Sbjct: 569 LQMHNIIIHGLCTAQKVDVALEIFTQM-RQVNCVPDLVTHNTIMEGLYKAGDCVEALKIW 627
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D + G+ P + Y+ LC ++ DA ++ + LD GI P ++ L +A+ D+
Sbjct: 628 DRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDD 687
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 140/277 (50%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI L ++ VE+A + + +R D +Y +L+ G + L + E +
Sbjct: 362 YNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAE 421
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
++G + D +Y M++ C ++AVEL +M+ K + H+F +LING +L
Sbjct: 422 NEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLE 481
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ + K + P +YN ++ C + R +DAY + EM + G+ P+ TY +++
Sbjct: 482 EAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLI 541
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + + + A +++ + K +P + + I++ C +VD+A+ I+ +M+
Sbjct: 542 DGLCRGEKVDMALNLWHQCINKR-LKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNC 600
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+P + ++T++ L +A K + +L+ G++P
Sbjct: 601 VPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQP 637
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 153/331 (46%), Gaps = 35/331 (10%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-------------W 55
+L F+ +I L K+ + A++VF +M + PD+++Y +L G W
Sbjct: 289 DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELW 348
Query: 56 GQQK-----NLLSMNEVYREMKDD----------------GFEPDVVSYGIMINAHCSAK 94
N++S N + + + D+ G + D +YG++IN C
Sbjct: 349 NVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNG 408
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
++A+ + E E + ++++GL + L +A++ Q KK + + +N
Sbjct: 409 YLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFN 468
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+++ Y + ++ +A ++ EM+ P +Y+ +++ L KA R +AY K M +
Sbjct: 469 SLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEE 528
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G +P + TY +++ C +VDMA+ +W + + + P + M++ +I+ LC K+D
Sbjct: 529 -GLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDV 587
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A + F +M + P + + + L G
Sbjct: 588 ALEIFTQMRQVNCVPDLVTHNTIMEGLYKAG 618
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 129/260 (49%), Gaps = 1/260 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ ++ LCK +E+A E+ +MKK R + + L+ G+ + L V REMK
Sbjct: 432 YSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMK 491
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P VVSY +IN C A+R+ +A +EM KP + LI+GL +++
Sbjct: 492 SKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVD 551
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL + Q + +P+ +N ++ C + +++ A + +MR+ P+ T++ ++
Sbjct: 552 MALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIM 611
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KAG EA ++ R+ + G +P + +Y I + C A+V A+ + RG+
Sbjct: 612 EGLYKAGDCVEALKIWDRI-LEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGI 670
Query: 253 LPVMHMYSTLINSLCHEDKL 272
LP ++ L+ ++ + L
Sbjct: 671 LPNAPTWNVLVRAVVDDKPL 690
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 108/231 (46%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G P + S+ M+NA + ++ EA F + P+ + LI +++ +
Sbjct: 109 GCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKG 168
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ G P+ +Y ++ A S + DA + DEM G+ P+ Y+I++
Sbjct: 169 KGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDG 228
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
++ G +A ++KR+ + P+V TY I++ C ++D +M +W+ MK P
Sbjct: 229 FLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSP 288
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ +S++I+ L + A K FQEM++ G+ P + ++ + L G
Sbjct: 289 DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTG 339
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 2/305 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K+G+ + N LI LCK VE A +V D+M P++ +YT +L G+ + +++
Sbjct: 194 KYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMV 253
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ N+V+ E+ D G+ PD +Y I++N +C R +A++L +M +P+ + ++
Sbjct: 254 NANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMV 313
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
EK+ EA +R + P + V+ C + +I +A + M K
Sbjct: 314 EAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCM 373
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ ++H L K G+ EA +F R G P++ TY ++ C ++ A +
Sbjct: 374 PDNAIMSTLIHWLCKEGKVWEARKLFGEFER--GAIPSLLTYNTLIAGMCEKGELSEAGK 431
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+WD+M +G P Y+ LI + + +EMLD P ++ L + L
Sbjct: 432 LWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELC 491
Query: 303 DEGME 307
GME
Sbjct: 492 KMGME 496
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 149/327 (45%), Gaps = 39/327 (11%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD-GFEPDVVSYGIMI 87
A F +++ ++S LL + Q K ++ +++ + G P+V + I+I
Sbjct: 149 ALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILI 208
Query: 88 NAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
A C + AV++ EM A P+ + T++ G S + A + FG+ RG+
Sbjct: 209 KALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWL 268
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI----------------- 190
P+A TY ++ YC R+ DA ++MD+M + G+ PN TY +
Sbjct: 269 PDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNL 328
Query: 191 ------------------VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
V+ L +AG+ EEA ++KRM +K P + ++ C
Sbjct: 329 LDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKK-NCMPDNAIMSTLIHWLC 387
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+V A +++ E + RG +P + Y+TLI +C + +L +A K + +M++ G +P
Sbjct: 388 KEGKVWEARKLFGEFE-RGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAF 446
Query: 293 LFSNLKQALRDEGMEETAV-VLAQKID 318
++ L + G + + +L + +D
Sbjct: 447 TYNMLIKGFSKIGNAKEGIRILEEMLD 473
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 132/313 (42%), Gaps = 4/313 (1%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
RL+ + + ++++ A ++F+ K + F + +Y ++ + + + + ++
Sbjct: 63 RLVSMITRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLH 122
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ + +I + A + D A+ F ++ N + S TL+N KR
Sbjct: 123 KSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYD 182
Query: 133 EALQFFGQSK-KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
F + K G P T N ++ A C + A +++DEM G+ PN TY +
Sbjct: 183 LVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTI 242
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L G A VF + + G P +TY I++ +C ++ A+++ D+M G
Sbjct: 243 LGGYSSRGDMVNANKVFGELFDR-GWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENG 301
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
V P Y ++ + C E K +A +ML+ P L + L + G E A
Sbjct: 302 VEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEAC 361
Query: 312 VLAQKIDKLRKTP 324
L +++ K P
Sbjct: 362 ELWKRMLKKNCMP 374
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 156/311 (50%), Gaps = 15/311 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-----WGQQK 59
GL+ L +F +I+ LCK +++A E+ ++M + + P++ ++T L++G W ++
Sbjct: 270 GLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKA 329
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L + V + + +P+V++Y MI+ +C + + A L M+ P+ + +
Sbjct: 330 FRLFLKLV----RSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYT 385
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TLI+G A GF P TYNA+V C R+ +AY+M+++ +
Sbjct: 386 TLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQN 445
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P+ TY+I++ K +A ++F +M K G +P + +Y ++ +FC ++
Sbjct: 446 GLKPDKFTYNILMSEHCKQENIRQALALFNKM-LKIGIQPDIHSYTTLIAVFCRENRMKE 504
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP----GQLFS 295
+ ++E G++P Y+++I C E L A K+F + D G P G + S
Sbjct: 505 SEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIIS 564
Query: 296 NL-KQALRDEG 305
L KQ+ RDE
Sbjct: 565 GLCKQSKRDEA 575
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 153/302 (50%), Gaps = 2/302 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + F +I + RA F ++ +P++ ++T ++EG ++ ++
Sbjct: 235 GFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQA 294
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLIN 123
E+ EM G++P+V ++ +I+ C ++A LF ++ + N KP+ + +I+
Sbjct: 295 FEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMIS 354
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G E +L+ A + K++G P TY ++ +C + AY +M+ M G P
Sbjct: 355 GYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSP 414
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY+ +++ L K GR +EAY + + + G +P TY I++ C + A+ +
Sbjct: 415 NLCTYNAIVNGLCKRGRVQEAYKMLED-GFQNGLKPDKFTYNILMSEHCKQENIRQALAL 473
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+++M G+ P +H Y+TLI C E+++ ++ +F+E + IGI P + ++++
Sbjct: 474 FNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCR 533
Query: 304 EG 305
EG
Sbjct: 534 EG 535
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 2/286 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLS 63
G K + LID LCK E+A +F K+ + P++ +YT ++ G+ ++ L
Sbjct: 305 GWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNR 364
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ MK+ G P+ +Y +I+ HC A ++ A +L M + P+ + ++N
Sbjct: 365 AEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVN 424
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL R+ EA + + G +P+ TYN ++ +C I A + ++M K GI P
Sbjct: 425 GLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQP 484
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ +Y ++ + R +E+ F+ R G PT TY ++ +C + +AM+
Sbjct: 485 DIHSYTTLIAVFCRENRMKESEMFFEEAVR-IGIIPTNKTYTSMICGYCREGNLTLAMKF 543
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + G P Y +I+ LC + K D+A + M++ G+ P
Sbjct: 544 FHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 155/354 (43%), Gaps = 38/354 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL N +I + VE A+ +F++M R PD SY +++ + + N
Sbjct: 161 MHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGN 220
Query: 61 LLSMNE-----------------------------------VYREMKDDGFEPDVVSYGI 85
+L ++ +R + D G EP+++++
Sbjct: 221 ILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTC 280
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ-SKKR 144
MI C +A E+ EM KP+ + +LI+GL + +A + F + +
Sbjct: 281 MIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSE 340
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
+P TY A++ YC ++N A ++ M++ G+ PNT TY ++ KAG E A
Sbjct: 341 NHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERA 400
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
Y + MS + G P + TY +V C +V A ++ ++ G+ P Y+ L++
Sbjct: 401 YDLMNLMSSE-GFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMS 459
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKI 317
C ++ + A F +ML IGI+P ++ L R+ M+E+ + + +
Sbjct: 460 EHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAV 513
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 7/235 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK+ + ERA ++ + M F P++ +Y ++ G ++
Sbjct: 372 MKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGR 431
Query: 61 LLSMNEVYREMKD---DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ E Y+ ++D +G +PD +Y I+++ HC + +A+ LF +M +P H
Sbjct: 432 V---QEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHS 488
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TLI E R+ E+ FF ++ + G P TY +++ YC + A + +
Sbjct: 489 YTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLS 548
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
G P++ TY ++ L K + +EA S++ M K G P T + +C
Sbjct: 549 DHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEK-GLVPCEVTRITLAYEYC 602
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 129/295 (43%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++++ + ++ A E+ +M + P+ ++ +++ + + ++ EM G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD +SY +M+ +C EA + M F +I+ + + AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+F + G EP + ++ C I A+ M++EM G PN T+ ++ L
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G TE+A+ +F ++ R +P V TY ++ +C +++ A + MK +G++P
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ Y+TLI+ C + A M G P ++ + L G + A
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEA 435
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
R+ +A M+ EM G+ PNTRT + ++ + G E A +F+ M + G +P +Y
Sbjct: 150 RLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVR-GVQPDSISY 208
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++V M+C + A + M RG + ++ +I+ + A YF+ ++D
Sbjct: 209 RVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVD 268
Query: 285 IGIRPPGQLFSNLKQALRDEG-------MEETAVVLAQKIDKLRKTPLVD 327
+G+ P F+ + + L G M E V K + T L+D
Sbjct: 269 MGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLID 318
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 90/233 (38%), Gaps = 38/233 (16%)
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE-ALQFFGQSKKR 144
M+ + R EAVE+ EM P+ +I + SE L E A F + R
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIK-VTSEMGLVEYAELLFEEMCVR 199
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P++ +Y +V YC I +A + + M + G + T+ +++ G T A
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRA 259
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
F+R+ VDM G+ P + ++ +I
Sbjct: 260 LWYFRRL-------------------------VDM-----------GLEPNLINFTCMIE 283
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
LC + A + +EM+ G +P ++L L +G E A L K+
Sbjct: 284 GLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKL 336
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 3/295 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + F+ LID LCK E+A V + + +R ++ +++ + N + +
Sbjct: 108 GCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 167
Query: 65 -NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++V + GF P V+ + ++IN C AK D A +L M C P+ F LI
Sbjct: 168 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 227
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL R+ EA Q + G P TY+ V+ C +++DAY + M + P
Sbjct: 228 GLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 287
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++I++ L KA R EEA ++ RM R+ G P + TY ++ C + QVD A ++
Sbjct: 288 NVVTHNILIDGLCKAKRIEEARQLYHRM-RETGCAPDIITYNSLIDGLCKSFQVDEAFQL 346
Query: 244 WDEMKARGVLPVMHM-YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ + GV + YSTL + ++ DAC+ F ++D G P +++L
Sbjct: 347 FQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 401
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 38/341 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI + ++ A ++ ++MK F+ + +T L++G ++ E +R M
Sbjct: 12 YGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA 71
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL---GSEK 129
D PDV++Y +++A C A ++DEA + REM A C P F TLI+GL GSE+
Sbjct: 72 KD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEE 130
Query: 130 RLSEALQ---------------------------------FFGQSKKRGFEPEAPTYNAV 156
+ L+ G +GF P +N V
Sbjct: 131 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 190
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ +C + ++ AY++++ M + G PN T+ I++ L KA R EA + ++M G
Sbjct: 191 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV-TGG 249
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P V TY V+ C QVD A ++ M+ R P + ++ LI+ LC ++++A
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ + M + G P +++L L + A L Q I
Sbjct: 310 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 350
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 159/358 (44%), Gaps = 38/358 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ +I+ LCK V+ A E+F M++R P++ ++ IL++G + K +
Sbjct: 249 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 308
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI-FCTLIN 123
++Y M++ G PD+++Y +I+ C + + DEA +LF+ + + + + + TL +
Sbjct: 309 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFH 368
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G + R+++A + F +GF P+ TY +++ YC + R + +++EM G P
Sbjct: 369 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 428
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE------------------------- 218
T VL L + TE A +F M+ + T+
Sbjct: 429 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVL 488
Query: 219 ------------PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
P+ S + +V C + D A ++ +M RG + Y+ L++ L
Sbjct: 489 EQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGL 548
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ D+A + F+ M+ G P + + L + A L Q++ KL P
Sbjct: 549 SRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 606
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 146/310 (47%), Gaps = 1/310 (0%)
Query: 5 GLKQELPDFNRLIDTLC-KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G+ F +I LC K VE A +V + + F P + + +++ G+ + K+L S
Sbjct: 143 GMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDS 202
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ M + G P+V ++ I+I C A R EA +L +M C P+ + T+IN
Sbjct: 203 AYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVIN 262
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL + ++ +A + F ++R P T+N ++ C + RI +A ++ MR+ G P
Sbjct: 263 GLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAP 322
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY+ ++ L K+ + +EA+ +F+ + + TY + + ++ A RI
Sbjct: 323 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI 382
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ + +G P + Y++LI C + + + +EM G P S + L +
Sbjct: 383 FSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFE 442
Query: 304 EGMEETAVVL 313
E A+ L
Sbjct: 443 GNHTERAIQL 452
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 40/328 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDP-DIKSYTILLEGWGQQK 59
M + G ++ +N LID LCKS V+ A ++F + + + +Y+ L G+
Sbjct: 315 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 374
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR------------------------ 95
+ ++ + D GF PD+ +Y +I +C R
Sbjct: 375 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 434
Query: 96 -----------YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ---S 141
+ A++LF M A C I+ ++ G+ + ++AL Q
Sbjct: 435 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDK 494
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+ R F P + +A+V + C R +DA +++ +M + G +Y+ +L L + R
Sbjct: 495 RDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRW 554
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
+EA VF+ M G P +ST +V+ C A+VD A + M G P + +T
Sbjct: 555 DEATQVFEAMV-SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNT 613
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRP 289
LI C + D A K +EM + G+ P
Sbjct: 614 LIGGYCKSGRADLARKLLEEMTEAGLEP 641
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 135/282 (47%), Gaps = 2/282 (0%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
P+ +Y IL+ G+ +L ++ EMK +GFE + V + ++ C A R EA+E
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
FR M A +C P + L++ L + EA + RG P+ T++ ++ C
Sbjct: 67 FRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
A+R+++++ + G+G + ++ ++ L + E S + G PTV
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ +V+ FC +D A ++ + M +G +P + ++ LI LC +++ +A + ++M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 283 LDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ G P +S + L +G + A L Q +++ R P
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER-RNCP 286
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 4/230 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWG---Q 57
M G + + ++ L + H ERA ++FD M R D Y +++EG +
Sbjct: 421 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 480
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
L++ E + +D F P + ++ + C R D+A +L +M +
Sbjct: 481 HNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSS 540
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L++GL +R EA Q F G PE T N V+ C + +++DAY ++ M
Sbjct: 541 YNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS 600
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
K G P+ T + ++ K+GR + A + + M+ + G EP +T++++
Sbjct: 601 KLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT-EAGLEPNDTTHDLL 649
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE----------------------- 147
C P+ + LI G S L A+Q + K GFE
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 148 -----------PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
P+ TY A+V A C + + ++A M+ EM G P+T T+ ++ L
Sbjct: 65 EHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC--YNAQVDMAMRIWDEMKARGVLP 254
K G E+A+ V + + ++ G + + +E +++ C YN+ V++A ++ + A+G P
Sbjct: 125 KFGSEEQAFRVLEDVIQR-GMGNSDAAFETIIQRLCNKYNS-VELASKVLGVVIAKGFTP 182
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ M++ +IN C LD A K + M++ G P F+ L L
Sbjct: 183 TVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGL 229
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 36/342 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI+ K V +A EV +M+ ++K+Y++L+ G+ + K+ +
Sbjct: 481 GLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA 540
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++ DG +PDVV Y +I A C + D AV +EM+ KP+ F +I+G
Sbjct: 541 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG 600
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + +AL F + G P TYNA++ ++ A +++DEM G+ PN
Sbjct: 601 FARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPN 660
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------------ 232
TY ++H G T +A++ F ++ R G + V TYE +++ C
Sbjct: 661 EHTYTTIMHGYASLGDTGKAFTYFTKL-RDEGLQLDVYTYEALLKACCKSGRMQSALAVT 719
Query: 233 --------------YNAQVDMAMR---IWD------EMKARGVLPVMHMYSTLINSLCHE 269
YN +D R IW+ +MK GV P +H Y++ IN+
Sbjct: 720 KEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKA 779
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ A K +EM +G++P + ++ L + E A+
Sbjct: 780 GDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKAL 821
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 144/299 (48%), Gaps = 1/299 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+K ++ +N +I C ++RA +M+K+R P +++ ++ G+ ++ +
Sbjct: 549 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMK 608
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+V+ M+ G P V +Y +I ++ ++A ++ EM P+ H + T++
Sbjct: 609 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 668
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G S +A +F + + G + + TY A++ A C S R+ A + EM I
Sbjct: 669 HGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 728
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
NT Y+I++ + G EA + ++M R+ G +P + TY + + A +
Sbjct: 729 RNTFIYNILIDGWARRGDIWEAADLMQQMKRE-GVQPDIHTYTSFINACSKAGDMQRATK 787
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+EMK+ GV P + Y+TLIN + A F+EM G++P ++ L +L
Sbjct: 788 TIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL 846
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 156/352 (44%), Gaps = 36/352 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L ++ L+ K+ + E A F + K++ + Y ++ + Q+ N
Sbjct: 372 MKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCN 431
Query: 61 LLSMNEVYREMKDDGFE-----------------------------------PDVVSYGI 85
+ + REM+++G + P V++YG
Sbjct: 432 MDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGC 491
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+IN + + +A+E+ +EME K + + LING K + A F K G
Sbjct: 492 LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 551
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+P+ YN ++ A+C +++ A + EM+K P TRT+ ++H + G ++A
Sbjct: 552 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 611
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
VF M R G PTV TY ++ +++ A +I DEM GV P H Y+T+++
Sbjct: 612 DVFDMM-RMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHG 670
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
A YF ++ D G++ + L +A G ++A+ + +++
Sbjct: 671 YASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEM 722
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 144/346 (41%), Gaps = 52/346 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI R +E A KMK+ + + +Y+IL+ G+ + N S + ++E K
Sbjct: 349 YTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAK 408
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ + + YG +I A+C D+A L REME I+ T+++G
Sbjct: 409 EKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDED 468
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ L F + K+ G P TY ++ Y +++ A + EM GI N +TY +++
Sbjct: 469 KCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLI 528
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD-------------- 238
+ +K A+++F+ + K G +P V Y ++ FC ++D
Sbjct: 529 NGFLKLKDWANAFAIFEDLI-KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRH 587
Query: 239 ---------------------MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
A+ ++D M+ G +P +H Y+ LI L + K++ A +
Sbjct: 588 KPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQ 647
Query: 278 YFQEMLDIGIRPPGQLFSNLKQA----------------LRDEGME 307
EM G+ P ++ + LRDEG++
Sbjct: 648 ILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQ 693
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI L + R +E+A+++ D+M P+ +YT ++ G+ + + +++
Sbjct: 629 YNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLR 688
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D+G + DV +Y ++ A C + R A+ + +EM A N + I+ LI+G +
Sbjct: 689 DEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIW 748
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA Q K+ G +P+ TY + + A + + A + ++EM+ G+ PN +TY ++
Sbjct: 749 EAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLI 808
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ +A E+A S F+ M + G +P + Y ++ A V
Sbjct: 809 NGWARASLPEKALSCFEEM-KLSGLKPDRAVYHCLMTSLLSRATV 852
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID + + A ++ +MK+ PDI +YT + + ++ + EMK
Sbjct: 734 YNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 793
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+V +Y +IN A ++A+ F EM+ + KP ++ L+ L S ++
Sbjct: 794 SVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVA 853
Query: 133 EALQFFG 139
+ G
Sbjct: 854 HGCIYPG 860
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 158/349 (45%), Gaps = 35/349 (10%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+P +N +I+ LCK + + E++ +MKK D+ +Y+ L+ G NL VY+
Sbjct: 255 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYK 314
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK----------------- 112
EM ++G PDVV Y M+N + A R +E +EL++ ME C+
Sbjct: 315 EMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAK 374
Query: 113 -----------------PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+ L++GL L++AL +++ + + Y++
Sbjct: 375 VDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSS 434
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ C R+++ ++D+M K G PN + V++ ++A + E+A F M K
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK- 493
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G PTV TY ++ + A + EM +G P M YS L+N LC KLD A
Sbjct: 494 GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ + L+ G +P ++ + + L G E A+ L ++ + + P
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 154/317 (48%), Gaps = 4/317 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ GL L +N LI C+ + ++A+E+ + M ++ F PD+ SY L+ +
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFC 119
+ +++ EM + G PDV Y I+I+ A E++ R ++ + P+ +
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+INGL + E+ + + + KK + TY+ ++ C S ++ A R+ EM +
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P+ Y+ +L+ ++AGR EE ++K M K G TV +Y I++R NA+VD
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVM-EKEGCR-TVVSYNILIRGLFENAKVDE 377
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ IW+ + + Y L++ LC L+ A +E + +S++
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437
Query: 300 ALRDEG-MEETAVVLAQ 315
L EG ++E A VL Q
Sbjct: 438 GLCREGRLDEVAGVLDQ 454
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 142/283 (50%), Gaps = 2/283 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G + + +N LI L ++ V+ A +++ + ++ D +Y +L+ G +
Sbjct: 351 MEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGY 409
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E ++ + D +Y MIN C R DE + +M CKP+PH+
Sbjct: 410 LNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNA 469
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ING +L +AL+FFG +G P TYN ++ + R ++AY ++ EM G
Sbjct: 470 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++++ L + + + A +++ + K G +P V + I++ C + +V+ A
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKMHNIIIHGLCSSGKVEDA 588
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++++ EMK R +P + ++TL+ + A K + +L
Sbjct: 589 LQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 119/245 (48%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G +P + SY ++NA + ++DEA F E P+ + LI +K+ +A
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ ++GF P+ +Y ++ + + ++DA ++ DEM + G+ P+ Y+I++
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K G A +++R+ + P P + +Y +++ C + D + IW MK
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
++ YSTLI+ LC LD A + ++EM + G+ P +++ + G E + L
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 348
Query: 315 QKIDK 319
+ ++K
Sbjct: 349 KVMEK 353
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 139/323 (43%), Gaps = 34/323 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC + A VFD M R P + +Y+ILL+ ++ + EM+
Sbjct: 254 FNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMR 313
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD+V+Y ++INA C+ DEA+ + + + CKP + ++ L +R
Sbjct: 314 AKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWK 373
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + + P+ T+N +V + C ++ A ++D M + G + TY +L
Sbjct: 374 EVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSIL 433
Query: 193 HHLIKAGRTEEAYSVFKRMSR---KPGT-------------------------------E 218
L GR ++A + R+ KP T
Sbjct: 434 DGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCP 493
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P T+ VV C VD A+R+ ++M G P + Y+ +I+ LC+E +DDA +
Sbjct: 494 PDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMEL 553
Query: 279 FQEMLDIGIRPPGQLFSNLKQAL 301
++ G +P F+ L + L
Sbjct: 554 LSDLQSCGCKPDIVTFNTLLKGL 576
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 3/297 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +G K + + ++ LC + ERA+E+ +M PD ++ ++ Q+
Sbjct: 452 LKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGL 511
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V +M ++G PD+V+Y +I+ C+ D+A+EL ++++ CKP F T
Sbjct: 512 VDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNT 571
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL R +A Q + P+ T+N V+ + C + A + M + G
Sbjct: 572 LLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENG 631
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ TY IV+ L+KAG+ + A + M+ GT P + TY V+ +++ A
Sbjct: 632 CVPNSSTYSIVVDALLKAGKAQAALELLSGMTN--GT-PDLITYNTVISNLTKAGKMEEA 688
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ + M + G+ P Y +L +C ED D A + + + D G+ P ++++
Sbjct: 689 LDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDV 745
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 149/321 (46%), Gaps = 4/321 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + +N +++ C++ +E A+ + + M F PD ++ L+ + +
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPD 269
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V+ +M G P VV+Y I+++A C Y +A+ L EM A C+P + LIN
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ +E + EAL G +P+A TY V+ + C S R + ++ EM P
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP 389
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ T++ ++ L + G + A V MS G + TY ++ C +VD A+ +
Sbjct: 390 DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEH-GCVADIVTYSSILDGLCDVGRVDDAVEL 448
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+K+ G P Y+T++ LC ++ + A + EML P F+ + +L
Sbjct: 449 LSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508
Query: 304 EGMEETAVVLAQKIDKLRKTP 324
+G+ + A+ + +++ + +P
Sbjct: 509 KGLVDRAIRVVEQMSENGCSP 529
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 36/309 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN ++ +LC+ V+RA V ++M + PDI +Y +++G + + E+ +++
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ 558
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+V++ ++ C R+++A +L M +NC P F T+I L + L+
Sbjct: 559 SCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLT 618
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A++ + G P + TY+ VV A + + A ++ M P+ TY+ V+
Sbjct: 619 QAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTN--GTPDLITYNTVI 676
Query: 193 HHLIKAGRTEEAYSVFK-------------------------------RMSRK---PGTE 218
+L KAG+ EEA + + RM R+ G
Sbjct: 677 SNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLS 736
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P + Y V+ FC + + D+A+ + M + G +P Y L+ +L + LD+A +
Sbjct: 737 PDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRL 796
Query: 279 FQEMLDIGI 287
+ +G+
Sbjct: 797 LASLCSLGV 805
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 131/305 (42%), Gaps = 9/305 (2%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKR--RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
R + +L + ++ A +FD M R P + IL++ + V+ +
Sbjct: 155 RRLRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL- 213
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G VV+Y M+N +C A R ++A L M P F LI L R+
Sbjct: 214 --GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPF---PPDTFTFNPLIRALCVRGRIP 268
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL F RG P TY+ ++ A C A ++DEMR G P+ TY++++
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLI 328
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + G +EA ++ + G +P TY V++ C + + + EM +
Sbjct: 329 NAMCNEGDVDEALNILSNLPSH-GCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P ++T++ SLC + +D A + M + G +S++ L D G + AV
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447
Query: 313 LAQKI 317
L ++
Sbjct: 448 LLSRL 452
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 113/253 (44%), Gaps = 3/253 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ G K ++ FN L+ LC E A+++ M + PD ++ ++ Q+
Sbjct: 557 LQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGL 616
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E + M ++G P+ +Y I+++A A + A+EL M TN P + T
Sbjct: 617 LTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNT 674
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ EAL G P+ TY ++ C + A RM+ ++ G
Sbjct: 675 VISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTG 734
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T Y+ VL + RT+ A F M G P STY I++ Y +D A
Sbjct: 735 LSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSS-GCMPDESTYVILLEALAYGGLLDEA 793
Query: 241 MRIWDEMKARGVL 253
R+ + + GVL
Sbjct: 794 KRLLASLCSLGVL 806
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 9/155 (5%)
Query: 5 GLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
G+ PD +N +I L K+ +E A ++ M PD +Y L G ++
Sbjct: 661 GMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGT 720
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ R ++D G PD Y ++ C +R D A++ F M ++ C P + L
Sbjct: 721 DRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVIL 780
Query: 122 INGLG------SEKRLSEALQFFGQSKKRGFEPEA 150
+ L KRL +L G K+ E E+
Sbjct: 781 LEALAYGGLLDEAKRLLASLCSLGVLDKKLIEEES 815
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 36/325 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++R I+ LCK + A E+F +M+++ PD +Y IL+ G + L + EM+
Sbjct: 94 YSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQ 153
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF P VV+Y +I+ C+A R D A+++ EME P+ + LI GL +
Sbjct: 154 ARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVE 213
Query: 133 EALQFFGQSKKRGFE--PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
A+ + K RG E P TY ++ C +DEM G PN TY
Sbjct: 214 RAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTA 273
Query: 191 VLHHLIKAGRTEEAYSVFKRMSR----------------------------------KPG 216
++H L + G EA + M + G
Sbjct: 274 LIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKG 333
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P V TY +++ C +D A+ + EM+A+G++P Y+TLIN D+ D A
Sbjct: 334 VAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHAL 393
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQAL 301
+ EM G+ P G ++ L ++L
Sbjct: 394 QLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+YR + + DV+SY IN C + EA+E+FREME P + LINGL
Sbjct: 78 IYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLC 137
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ +L + + + RGF P TY ++ +C + R++ A ++DEM GI PNT
Sbjct: 138 KDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTV 197
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE--PTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ L G E A V K M + G E P V TY ++ C +M M
Sbjct: 198 TYTALIQGLCDCGEVERAILVLKEMKLR-GNECCPNVVTYTQLIHGLCQKGLFEMGMEFL 256
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
DEM G P Y+ LI+ LC + +A EM+ IG ++++L L
Sbjct: 257 DEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGL 313
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 133/278 (47%), Gaps = 3/278 (1%)
Query: 42 DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
D D+ SY+ + G ++ + E++REM++ G PD +Y I+IN C + + V
Sbjct: 88 DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVS 147
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L EM+A P+ + TLI+G + R+ A+ + + RG P TY A++ C
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207
Query: 162 WSMRINDAYRMMDEMRKCG--IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+ A ++ EM+ G PN TY ++H L + G E M G P
Sbjct: 208 DCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIIS-GCFP 266
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
+TY ++ C A + +EM A G + +Y++LI+ LC +LD A +
Sbjct: 267 NNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQ 326
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
M++ G+ P +++L Q L D G+ + A+ L Q++
Sbjct: 327 ILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEM 364
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + ++ +N LID LCK ++ A+E+ M ++ PD+ +YT L++G
Sbjct: 294 MVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGL 353
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +EM+ G P+ V+Y +IN A R D A++L EM++ P+ I+
Sbjct: 354 LDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKI 413
Query: 121 LINGLGS 127
L L S
Sbjct: 414 LFKSLYS 420
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 45/104 (43%)
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V +Y + C Q+ AM I+ EM+ +G P Y+ LIN LC + +L+
Sbjct: 91 VISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMD 150
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM G P ++ L G + A+ + +++ TP
Sbjct: 151 EMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITP 194
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 150/307 (48%), Gaps = 3/307 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+ L++ LCK+ A ++ ++ R P++ Y+ +++G + K + ++Y EM
Sbjct: 117 SYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM 176
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
P+V++Y +I A C A + A L EM N P + F LI+ L E +
Sbjct: 177 DAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK- 235
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A Q F + G P +YN ++ C R+++A ++ EM + P+T TY+ +
Sbjct: 236 -NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 294
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K+GR A ++ M + G V TY ++ C N +D A ++ +MK RG
Sbjct: 295 IDGLCKSGRITSALNLMNEMHHR-GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 353
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ P M+ Y+ LI+ LC +L +A + FQ +L G ++ + L EGM + A+
Sbjct: 354 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 413
Query: 312 VLAQKID 318
+ K++
Sbjct: 414 AIKSKME 420
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 137/275 (49%), Gaps = 3/275 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI C + + A + +M + +PD+ +++IL++ ++ + +++ M
Sbjct: 188 YNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMV 245
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V SY IMIN C KR DEA+ L REM N P + +LI+GL R++
Sbjct: 246 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRIT 305
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL + RG + TY +++ A C + ++ A + +M++ GI P TY ++
Sbjct: 306 SALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALI 365
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR + A +F+ + K G V TY +++ C D A+ I +M+ G
Sbjct: 366 DGLCKGGRLKNAQELFQHLLVK-GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 424
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+P + +I SL +D+ D A K EM+ G+
Sbjct: 425 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 142/294 (48%), Gaps = 5/294 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +ID LCK + V A +++ +M R P++ +Y L+ + L+ + EM
Sbjct: 153 YSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMI 212
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDV ++ I+I+A C K A ++F M P+ + + +INGL KR+
Sbjct: 213 LKNINPDVYTFSILIDALC--KEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 270
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ + + P+ TYN+++ C S RI A +M+EM G + TY +L
Sbjct: 271 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 330
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K ++A ++F +M + G +PT+ TY ++ C ++ A ++ + +G
Sbjct: 331 DALCKNQNLDKATALFMKMKER-GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGC 389
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL--RDE 304
+ Y+ +I+ LC E D+A +M D G P F + ++L +DE
Sbjct: 390 CIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDE 443
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 144/285 (50%), Gaps = 9/285 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
MD G++Q L + LI+ C + + + K+ K + P+ ++T L++G G+
Sbjct: 36 MDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGE 95
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K LL ++ ++ F+ + VSYG ++N C A++L R +E + +P+ +
Sbjct: 96 VKKLLHFHD---KVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVM 152
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +I+GL +K ++EA + + R P TYN ++ A+C + ++ A+ ++ EM
Sbjct: 153 YSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMI 212
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
I P+ T+ I++ L K G+ A +F M + G P V +Y I++ C +V
Sbjct: 213 LKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQM-GVNPNVYSYNIMINGLCKCKRV 269
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
D AM + EM + ++P Y++LI+ LC ++ A EM
Sbjct: 270 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM 314
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N +I+ LCK + V+ A + +M + PD +Y L++G +
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S + EM G DVV+Y +++A C + D+A LF +M+ +P+ + +
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL RL A + F +G + TY ++ C ++A + +M G
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
PN T++I++ L + ++A + M K
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 457
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 111/250 (44%), Gaps = 3/250 (1%)
Query: 40 RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
R I + +L + K L++ + ++M G E ++V+ I+IN C + +
Sbjct: 5 RHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFS 64
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
L ++ P+ + TL+ GL + + + L F + + F+ +Y ++
Sbjct: 65 FSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNG 124
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
C + A +++ + PN Y ++ L K EAY ++ M + P
Sbjct: 125 LCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDARE-IFP 183
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY ++ FC Q+ A + EM + + P ++ +S LI++LC E K +A + F
Sbjct: 184 NVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIF 241
Query: 280 QEMLDIGIRP 289
M+ +G+ P
Sbjct: 242 HAMVQMGVNP 251
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GI N T I+++ G+ ++S+ ++ K G P T+ +++ C +V
Sbjct: 40 GIEQNLVTLSILINCFCHLGQMAFSFSLLGKI-LKLGYXPNTITWTTLMKGLCLKGEVKK 98
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+ D++ A+ Y TL+N LC + A K + + D RP ++S +
Sbjct: 99 LLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIID 158
Query: 300 ALRDEGMEETAVVLAQKID 318
L + + A L ++D
Sbjct: 159 GLCKDKLVNEAYDLYSEMD 177
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ KFG+ L +N LI+++CK ++ A+ +F+ M + P+ +Y+IL++ + ++
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +M + G + V Y +I+ HC + A LF EM A KP+ I+ +
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G E L A + + + +G P T+ A++ C + R+ +A ++ EM +
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY++++ K G T A+ + M K G P TY ++ C +V A
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEK-GLVPDTYTYRPLISGLCSTGRVSEA 584
Query: 241 MRIWDEMKA--------RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
++++ G LP + Y+ LIN LC +D A +EML P
Sbjct: 585 REFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQN 644
Query: 293 LFSNLKQALRDEGMEETAVVL 313
++ L EG E A+ L
Sbjct: 645 TYACFLDYLTSEGNIEKAIQL 665
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 142/297 (47%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ ++ + ++ +LC+ + RA+EV +M+ D + +Y + + G + + +
Sbjct: 210 GLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEA 269
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E+ + G DV +Y ++ C + ++ E+ EM PS L++G
Sbjct: 270 VEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + A + KK G P YNA++ + C ++++A + + M G+ PN
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I++ K G+ + A +M+ + G + TV Y ++ C ++ A ++
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMT-EVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
DEM A G+ P + +Y++LI+ C E +L +A + + EM GI P F+ L L
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGL 505
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 143/301 (47%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ + +++ L + R A +FD++ PD+ YT ++ + K+ +
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV M+ G + V +Y + I C +R EAVE+ + + +CTL+ G
Sbjct: 235 REVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLG 294
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + + + GF P + +V I A+ ++++++K G+ P+
Sbjct: 295 LCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPS 354
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ +++ + K G+ +EA S+F M K G P TY I++ FC ++D+A+
Sbjct: 355 LFVYNALINSMCKDGKLDEAESLFNNMGHK-GLFPNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M G+ ++ YS+LI+ C KL A F EM+ G++P ++++L E
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473
Query: 305 G 305
G
Sbjct: 474 G 474
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 148/331 (44%), Gaps = 14/331 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG + L+D L K ++ A ++ +K+KK P + Y L+ +
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ M G P+ V+Y I+I++ C + D A+ +M K + + + +
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +L A F + G +P Y +++ YC +++A+R+ EM G
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PNT T+ ++ L A R EA +F M + P TY +++ C A
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMV-EWNVIPNEVTYNVLIEGHCKEGNTVRA 549
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ DEM +G++P + Y LI+ LC ++ +A ++ ++ G+ +Q
Sbjct: 550 FELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL-------QGE-----QQK 597
Query: 301 LRD-EGMEETAVVLAQKIDKLRKTPLVDRGQ 330
L + EG V I+ L K L+D+ +
Sbjct: 598 LNEIEGCLPNVVTYTALINGLCKIGLMDKAE 628
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 142/305 (46%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + +N I LCK++ V A E+ + + + D+ +Y L+ G + +
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEE 300
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ EM + GF P + +++ A +L +++ PS ++
Sbjct: 301 FEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNA 360
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN + + +L EA F +G P TY+ ++ ++C +++ A + +M + G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I Y ++ K G+ A S+F M G +P V Y ++ +C ++ A
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIAN-GLKPNVVIYTSLISGYCKEGELHNA 479
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ EM +G+ P + ++ LI+ LCH +++ +A K F EM++ + P ++ L +
Sbjct: 480 FRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539
Query: 301 LRDEG 305
EG
Sbjct: 540 HCKEG 544
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 129/293 (44%), Gaps = 10/293 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + + LI CK + A ++ +M + P+ ++T L+ G +
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N+++ EM + P+ V+Y ++I HC A EL EM P + + LI+G
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISG 574
Query: 125 LGSEKRLSEALQFF----GQSKK----RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
L S R+SEA +F G+ +K G P TY A++ C ++ A + EM
Sbjct: 575 LCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 634
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
PN TY L +L G E+A + + G TY I++R FC +
Sbjct: 635 LASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE--GFLANTVTYNILIRGFCKLGR 692
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ A + M G+ P YST+I C L +A K ++ ML+ G+ P
Sbjct: 693 IQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 745
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ ++ + L+ LCK E +E+ ++M + F P + + L++G ++ N+ S
Sbjct: 280 GLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSA 339
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++K G P + Y +IN+ C + DEA LF M P+ + LI+
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L AL F G+ + G + Y++++ +C ++ A + DEM G+ PN
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ K G A+ ++ M+ K G P T+ ++ C+ ++ A +++
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGK-GISPNTYTFTALISGLCHANRMAEANKLF 518
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM V+P Y+ LI C E A + EM++ G+ P + L L
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578
Query: 305 G 305
G
Sbjct: 579 G 579
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ CK + RA E+ D+M ++ PD +Y L+ G + E +++
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592
Query: 73 DD--------GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ G P+VV+Y +IN C D+A L REM A+N P+ + + ++
Sbjct: 593 GEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 652
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L SE + +A+Q GF TYN ++ +C RI +A ++ M GI P+
Sbjct: 653 LTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPD 711
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y +++ + G +EA +++ M + G P Y ++ C ++ A +
Sbjct: 712 CISYSTIIYEYCRRGDLKEAIKLWESMLNR-GVNPDTVAYNFLIYGCCVTGELTKAFELR 770
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
D+M RGV P Y++LI+ C + YF L+
Sbjct: 771 DDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFSCKLN 810
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 128/291 (43%), Gaps = 2/291 (0%)
Query: 30 QEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINA 89
+ D +K F + + +L++ + Q + L V R M D G P + + ++N
Sbjct: 131 ESFLDSYRKCNFSTTL-GFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNG 189
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
+++ A+ LF E+ ++ +P +++ ++ L K A + G+ + G +
Sbjct: 190 LIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLS 249
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
TYN + C + R+ +A + + + G+ + TY ++ L K E +
Sbjct: 250 VATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMN 309
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M + G P+ + +V + A + +++K GV P + +Y+ LINS+C +
Sbjct: 310 EMI-EFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD 368
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
KLD+A F M G+ P +S L + G + A+ K+ ++
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+ T + V+ + A + DE+ G+ P+ Y V+ L + A
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRA 234
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
V RM G + +V+TY + +R C N +V A+ I + + +G+ + Y TL+
Sbjct: 235 REVIGRM-ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVL 293
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
LC ++ + + EM++ G P SNL LR +G +A L K+ K P
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 156/312 (50%), Gaps = 13/312 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID CK+R++E+A +M++ P +Y+ +++ + + N+ +V+ EM
Sbjct: 47 YNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMP 106
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD+V++ ++++ A++ EA ELFR M + CKP + T+I GL K+L
Sbjct: 107 AKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLD 166
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ + K+ P TY ++ C R+ AY + ++M + Y ++
Sbjct: 167 EAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLF 226
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV----RMFCYNAQVDMAMRIWDEMK 248
+ L +AG+ EA V+ M RK T +TY +VV +M N + A ++ EM
Sbjct: 227 NKLQRAGKLVEASRVYSDMCRK-NVCMTDNTYSLVVLGLSKMDGGNVE---AAKLVTEMM 282
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD----- 303
+ + P + YS LIN LC + +A + FQEM GI P ++ L + L
Sbjct: 283 GKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQ 342
Query: 304 EGMEETAVVLAQ 315
+ ME T +L Q
Sbjct: 343 DAMELTYFMLDQ 354
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 160/349 (45%), Gaps = 46/349 (13%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM- 71
+ LID LCK +++A EVF+KM + +Y++L + L+ + VY +M
Sbjct: 187 YTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMC 246
Query: 72 -------------------KDDG----------------FEPDVVSYGIMINAHCSAKRY 96
K DG PD +Y I+IN C A+R
Sbjct: 247 RKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRP 306
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
EA E+F+EM P+ + TL+ GL S +L +A++ +G P+ +YN +
Sbjct: 307 GEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLM 366
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ +C + N+AY + +M K GI NT TY+ ++ IK A+ +FKRM
Sbjct: 367 IRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKN 426
Query: 217 TE---PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
+ P + TYEI++ C QV+ A ++ M+ +G +P + ++ L++ L +LD
Sbjct: 427 DKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLD 486
Query: 274 DACKYFQEMLDIGIRPPGQLFSN----LKQALRDEGMEETAVVLAQKID 318
DA + ++EM I + QL + L LR ++E L Q D
Sbjct: 487 DAFELYKEMSRINCQ---QLVGSSNILLDGILRRGSVDEAKDFLKQMTD 532
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 149/307 (48%), Gaps = 10/307 (3%)
Query: 7 KQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K+ PDF + LI+ LCK+R A+E+F +M+ R P + +Y LLEG L
Sbjct: 284 KKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQD 343
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E+ M D G PD SY +MI C+ +EA LF++M + + +I
Sbjct: 344 AMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIV 403
Query: 124 GLGSEKRLSEALQFFG--QSKKRGFEPEAP---TYNAVVGAYCWSMRINDAYRMMDEMRK 178
G ++ S A F QS K P AP TY ++ + C + ++ +A++++ MR
Sbjct: 404 GFIKDEAWSSAWMLFKRMQSGKNDKVP-APNMFTYEILISSLCKTDQVEEAFKLLSAMRD 462
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G P+ + ++++L L +AGR ++A+ ++K MSR + V + I++ VD
Sbjct: 463 KGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSR-INCQQLVGSSNILLDGILRRGSVD 521
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +M G++P Y L+ LC + K D A K +E++ G RP Q L
Sbjct: 522 EAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLL 581
Query: 299 QALRDEG 305
AL +G
Sbjct: 582 GALCAQG 588
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 4/291 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G ++ ++ + CK+ +V +A +VF +M + +PDI ++ +LL G + +
Sbjct: 70 MEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARK 129
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++R M G +PDVV+Y MI C K+ DEAV L M+ + P+ + T
Sbjct: 130 IHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 189
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L RL +A + F + + P Y+ + + ++ +A R+ +M +
Sbjct: 190 LIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKN 249
Query: 181 IGPNTRTYDIVLHHLIK--AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ TY +V+ L K G E A V + M +K P Y I++ C +
Sbjct: 250 VCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKK--IAPDFYAYSILINGLCKARRPG 307
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A ++ EM+ RG+ P + Y+TL+ L KL DA + MLD G P
Sbjct: 308 EAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLP 358
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 5/242 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD----PDIKSYTILLEGWG 56
M K G+ +N +I K A +F +M+ + D P++ +Y IL+
Sbjct: 386 MIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLC 445
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+ + ++ M+D GF P + + ++++ A R D+A EL++EM NC+
Sbjct: 446 KTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVG 505
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
L++G+ + EA F Q G P+ TY+ +V CW + + A ++++E+
Sbjct: 506 SSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 565
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ G P + +L L G + AY + + G E T+ + +V C +
Sbjct: 566 VRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLP-SVGVEVTLGMHNTLVTSCCLARK 624
Query: 237 VD 238
+D
Sbjct: 625 LD 626
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKCGIGPNTRTYDIVLHHLIKAGRTEE 203
G P A YN ++ C + + +A + M + C PN +Y+I++ KA E+
Sbjct: 5 GLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCA--PNVVSYNIIIDGYCKARNIEK 62
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A + + M + G PT Y +V+ FC V AM ++ EM A+G P + ++ L+
Sbjct: 63 ALAFLREME-ELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLL 121
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
+ L K+ +A + F+ M G +P ++ + L + AV L +++ + +
Sbjct: 122 SGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVS 181
Query: 324 P 324
P
Sbjct: 182 P 182
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M + G+ PN Y+ ++ L KAG EA S KRM + P V +Y I++ +C
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH--CAPNVVSYNIIIDGYCKAR 58
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
++ A+ EM+ G P H YS+++ S C + A F EM G P F+
Sbjct: 59 NIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFN 118
Query: 296 NLKQAL 301
L L
Sbjct: 119 VLLSGL 124
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 147/309 (47%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + N L+ L K V+ A E++ ++ + ++ + I++ + + + +
Sbjct: 214 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 273
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+M++ G PDVV+Y +INA+C +EA EL M KP + +ING
Sbjct: 274 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 333
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + A + K G P+ TYN ++ C + + DA R+ DEM G+ P+
Sbjct: 334 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 393
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++ ++ L K G ++A F+ M + G P Y I++ FC N + A+++
Sbjct: 394 LVSFSALIGLLSKNGCLDQALKYFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 452
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM +G + + Y+T++N LC E L +A + F EM + G+ P F+ L +
Sbjct: 453 DEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 512
Query: 305 GMEETAVVL 313
G AV L
Sbjct: 513 GNMNKAVTL 521
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 145/286 (50%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + +N +I+ LCK+ RA+ V D+M K PD +Y ILL + N
Sbjct: 315 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 374
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++ EM G PD+VS+ +I D+A++ FR+M+ P I+
Sbjct: 375 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 434
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G +SEAL+ + ++G + TYN ++ C +++A + EM + G
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ +++ K G +A ++F+ M ++ +P V TY ++ FC ++++
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKV 553
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+W++M +R + P Y LIN C+ + +A + + EM++ G
Sbjct: 554 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L F+ LI L K+ +++A + F MK PD YTIL+ G+ + +
Sbjct: 389 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 448
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V EM + G DVV+Y ++N C K EA ELF EM P + F TLING
Sbjct: 449 LKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 508
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +++A+ F +R +P+ TYN ++ +C + + ++M I PN
Sbjct: 509 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 568
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+++ G EA+ ++ M K G E T+ T +V+ +C A
Sbjct: 569 HISYGILINGYCNMGCVSEAFRLWDEMVEK-GFEATIITCNTIVKGYCRAGNAVKADEFL 627
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M +G++P Y+TLIN E+ +D A +M + G+ P ++ + +
Sbjct: 628 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQ 687
Query: 305 G-MEETAVVLAQKIDK 319
G M+E +++ + I++
Sbjct: 688 GRMQEAELIMLKMIER 703
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 140/285 (49%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +++ LCK + + A E+F +M +R PD ++T L+ G+ + N+
Sbjct: 459 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA 518
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M +PDVV+Y +I+ C ++ EL+ +M + P+ + LING
Sbjct: 519 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 578
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +SEA + + + ++GFE T N +V YC + A + M GI P+
Sbjct: 579 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 638
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ IK + A+++ +M G P V TY +++ F ++ A I
Sbjct: 639 GITYNTLINGFIKEENMDRAFALVNKM-ENSGLLPDVITYNVILNGFSRQGRMQEAELIM 697
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M RGV P Y++LIN ++ L +A + EML G P
Sbjct: 698 LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 155/336 (46%), Gaps = 30/336 (8%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIK-----------------SY 48
K L F+ +I L +SR + AQ V +M ++ ++ +
Sbjct: 128 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 187
Query: 49 TILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA 108
+L+ + Q + L E +R +K G + + ++ D A E+++E+
Sbjct: 188 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 247
Query: 109 TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
+ + + + +IN L +++ F +++G P+ TYN ++ AYC + +
Sbjct: 248 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 307
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A+ +MD M G+ P TY+ +++ L K G+ A V M K G P +TY I++
Sbjct: 308 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM-LKIGMSPDTATYNILL 366
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C N + A RI+DEM ++GV+P + +S LI L LD A KYF++M + G+
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 426
Query: 289 PPGQLFSNL----------KQAL--RDEGMEETAVV 312
P +++ L +AL RDE +E+ V+
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 462
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 137/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G+ ++ +N LI+ C+ +E A E+ D M + P + +Y ++ G +
Sbjct: 280 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 339
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V EM G PD +Y I++ C +A +F EM + P F
Sbjct: 340 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 399
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L L +AL++F K G P+ Y ++G +C + +++A ++ DEM + G
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY+ +L+ L K EA +F M+ + G P T+ ++ + + ++ A
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTER-GVFPDFYTFTTLINGYSKDGNMNKA 518
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +++ M R + P + Y+TLI+ C +++ + + +M+ I P
Sbjct: 519 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 567
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 41/219 (18%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
LK ++ +N LID CK +E+ E+++ M RR P+ SY IL+ G+ N+ ++
Sbjct: 530 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC---NMGCVS 586
Query: 66 EVYR---EMKDDGFE-----------------------------------PDVVSYGIMI 87
E +R EM + GFE PD ++Y +I
Sbjct: 587 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 646
Query: 88 NAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
N + D A L +ME + P + ++NG + R+ EA + +RG
Sbjct: 647 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN 706
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
P+ TY +++ + + +A+R+ DEM + G P+ +
Sbjct: 707 PDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + N ++ C++ + +A E M + PD +Y L+ G+ +++N+
Sbjct: 599 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 658
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M++ G PDV++Y +++N R EA + +M P + +LING
Sbjct: 659 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 718
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPE 149
++ L EA + + +RGF P+
Sbjct: 719 HVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL ++ +N +++ + ++ A+ + KM +R +PD +YT L+ G Q N
Sbjct: 665 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 724
Query: 61 LLSMNEVYREMKDDGFEPD 79
L V+ EM GF PD
Sbjct: 725 LKEAFRVHDEMLQRGFVPD 743
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 143/294 (48%), Gaps = 4/294 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD +N +ID CKS ++ A E+ + F PD +Y L+ G + ++ E
Sbjct: 312 IPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALE 371
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ E + +PD+V Y ++ C A+++ EM C P + +INGL
Sbjct: 372 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLC 431
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+S+A + +G+ P+ T+N ++ YC ++++ A ++++ M GI P+
Sbjct: 432 KMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVI 491
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ VL+ L KAG+ +E F+ M K G P TY I++ FC Q++ A +
Sbjct: 492 TYNSVLNGLCKAGKAKEVNETFEEMILK-GCRPNAITYNILIENFCKINQLEEASGVIVR 550
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M G++P ++TLI+ C LD A FQ++ + G F+ L A
Sbjct: 551 MCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 604
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 152/359 (42%), Gaps = 39/359 (10%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K +PD + LI+ LC +ERA E+F++ + + PD+ Y L++G +Q +L
Sbjct: 343 FKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 402
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+V EM ++G PD+ +Y I+IN C +A + + P F TLI
Sbjct: 403 HALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLI 462
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +L ALQ + G P+ TYN+V+ C + + + +EM G
Sbjct: 463 DGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 522
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD---- 238
PN TY+I++ + K + EEA V RM + G P ++ ++ FC N +D
Sbjct: 523 PNAITYNILIENFCKINQLEEASGVIVRMCQD-GLVPDAVSFNTLIHGFCRNGDLDGAYL 581
Query: 239 -------------------------------MAMRIWDEMKARGVLPVMHMYSTLINSLC 267
MA +I+ EM ++G P ++ Y L++ LC
Sbjct: 582 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLC 641
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
+D A + EM+ G P F + L AV + + ++ P V
Sbjct: 642 KAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 141/284 (49%), Gaps = 2/284 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N I LC+ +E A + ++M PD+ +Y L+ G + + + M +
Sbjct: 250 NIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN 308
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G PD +Y +I+ +C + EA EL ++ P +C+LINGL +E +
Sbjct: 309 QGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIER 368
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL+ F +++ + +P+ YN++V C I A ++M+EM + G P+ TY+I+++
Sbjct: 369 ALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K G +A V K G P V T+ ++ +C ++D A+++ + M G+
Sbjct: 429 GLCKMGNISDAAVVMNDAIVK-GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIA 487
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P + Y++++N LC K + + F+EM+ G RP ++ L
Sbjct: 488 PDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 531
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 136/285 (47%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +I+ LCK ++ A V + + + PD+ ++ L++G+ ++ L S
Sbjct: 415 GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSA 474
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M G PDV++Y ++N C A + E E F EM C+P+ + LI
Sbjct: 475 LQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 534
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L EA + + G P+A ++N ++ +C + ++ AY + ++ + G
Sbjct: 535 FCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 594
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I++ + A +F M K G +P + TY I+V C A VD A
Sbjct: 595 ADTFNILIGAYSSKLNMQMAEKIFGEMISK-GYKPDLYTYRILVDGLCKAANVDRAYAHL 653
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM ++G +P M + ++N L ++ +A M+ +G+ P
Sbjct: 654 AEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 2/303 (0%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P + I ++ + A + F++M P +Y +++ ++VY
Sbjct: 72 PLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVR 131
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M G PD ++ + + + C R A+ L R + C P +CT++ GL +
Sbjct: 132 MLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGH 191
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
A F + R P+ T+N V+ A C + ++ ++ ++ K G+ N T +I
Sbjct: 192 GYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNI 251
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+ L + GR EEA ++ +RM P V TY ++R C +++V A + M +
Sbjct: 252 WIRGLCEDGRLEEAVALVERMGAY--VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ 309
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G +P Y+T+I+ C L +A + ++ + G P + +L L EG E A
Sbjct: 310 GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERA 369
Query: 311 VVL 313
+ L
Sbjct: 370 LEL 372
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 1/221 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +G+ ++ +N +++ LCK+ + E F++M + P+ +Y IL+E + +
Sbjct: 481 MWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 540
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + V M DG PD VS+ +I+ C D A LF++++ + F
Sbjct: 541 LEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 600
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI S+ + A + FG+ +G++P+ TY +V C + ++ AY + EM G
Sbjct: 601 LIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKG 660
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
P+ T+ +L+ L R EA ++ M R G P V
Sbjct: 661 FVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRM-GVVPEV 700
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 117/279 (41%), Gaps = 40/279 (14%)
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+ D +P V+ I A+ A R AV+ F M+ C P+ + +++ L +
Sbjct: 64 HLAPDSLQPLYVA---SIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAA 120
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM---------------- 173
+A + + + G P+A T+ + ++C + R + A R++
Sbjct: 121 YHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYC 180
Query: 174 -------------------DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
DEM + P+ T++ VLH L + G E+ ++ ++ ++
Sbjct: 181 TVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKR 240
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G T I +R C + +++ A+ + + M A V P + Y+TL+ LC + K+ +
Sbjct: 241 -GMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQE 298
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
A +Y M++ G P ++ + GM + A L
Sbjct: 299 AAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATEL 337
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
++ I RL A+ F + P AP YNA++ A + + A+++ M
Sbjct: 73 LYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRM 132
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ P+ RT+ + L GR A + + +S + G + + Y VVR +
Sbjct: 133 LAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSER-GCDAKPAAYCTVVRGLYAHGH 191
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
A ++DEM R V P + ++ ++++LC + + ++ ++L G+ +
Sbjct: 192 GYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNI 251
Query: 297 LKQALRDEGMEETAVVLAQKI 317
+ L ++G E AV L +++
Sbjct: 252 WIRGLCEDGRLEEAVALVERM 272
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+D+ G FN LI +++ A+++F +M + + PD+ +Y IL++G + N
Sbjct: 586 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAAN 645
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS--PHIF 118
+ EM GF P + ++G M+N R EAV + M P I
Sbjct: 646 VDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTIL 705
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFE 147
T + + K L E L G R +E
Sbjct: 706 STDKKEIAAPKILVEELMKKGHISYRAYE 734
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 147/299 (49%), Gaps = 1/299 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + +N +I C + A E+FD+M++R ++ +Y L+ G Q++ +L
Sbjct: 264 GIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA 323
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ MK DG P+++SY +I+ +CS D+A LF +M+++ PS + LI G
Sbjct: 324 ERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAG 383
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + + + RG P TY ++ A S I A+++ M K G+ +
Sbjct: 384 FSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVAD 443
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y +++H L G +EA +FK + +P Y ++ +C A+R+
Sbjct: 444 IYIYGVLIHGLCVVGDMKEASKLFKSLDEMH-LKPNDVIYNTMIYGYCKEGSSYRALRLL 502
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM G++P + Y++ I LC ++K +A ++M+++G++P +++ + +A D
Sbjct: 503 KEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFD 561
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 167/329 (50%), Gaps = 7/329 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M++ GL + + LID CK+ +ER +++F KM + + +YT+L+ G+ G
Sbjct: 190 MEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGL 249
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+K+ + E+Y +MK G P+V +Y MI C+ + + A ELF EM +
Sbjct: 250 KKDGI---ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVT 306
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TLI GL E+R+ EA + + K+ G P +YN ++ YC ++ A + ++M+
Sbjct: 307 YNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMK 366
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
G P+ TY+I++ +A + + + M + G P+ TY I++ + +
Sbjct: 367 SSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR-GLSPSKVTYTILMDALVRSDNI 425
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ A +I+ M+ G++ +++Y LI+ LC + +A K F+ + ++ ++P +++ +
Sbjct: 426 EKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTM 485
Query: 298 KQALRDEGMEETAVVLAQKIDKLRKTPLV 326
EG A+ L +++ + P V
Sbjct: 486 IYGYCKEGSSYRALRLLKEMGENGMVPNV 514
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 160/322 (49%), Gaps = 1/322 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K +K ++ F +I C+ ++++ EV +M++ P++ YT L++G + ++
Sbjct: 157 KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIE 216
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+++ +M + + +Y ++IN + +EL+ +M+ T P+ + + ++I
Sbjct: 217 RGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMI 276
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
++ +L+ A + F + ++RG TYN ++G C R+ +A R+M M++ G+
Sbjct: 277 CRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLS 336
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN +Y+ ++ G ++A S+F +M + G P+++TY I++ F
Sbjct: 337 PNLISYNTLIDGYCSIGNLDKASSLFNQM-KSSGQSPSLATYNILIAGFSEAKNSAGVTD 395
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ EM+ARG+ P Y+ L+++L D ++ A + + M G+ ++ L L
Sbjct: 396 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 455
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
G + A L + +D++ P
Sbjct: 456 VVGDMKEASKLFKSLDEMHLKP 477
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 3/298 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ L KS E+A VF++ K D+ S+ I+++G + L EV +M+
Sbjct: 133 FNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQME 191
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+VV Y +I+ C + +LF +M + + + + LING
Sbjct: 192 EMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKK 251
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ ++ + + K G P TYN+++ C ++N+A+ + DEMR+ G+ N TY+ ++
Sbjct: 252 DGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLI 311
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + R EA + RM R G P + +Y ++ +C +D A ++++MK+ G
Sbjct: 312 GGLCQERRVLEAERLMCRMKRD-GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQ 370
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEET 309
P + Y+ LI +EM G+ P ++ L AL R + +E+
Sbjct: 371 SPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKA 428
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL L +N LID C ++++A +F++MK P + +Y IL+ G+ + KN
Sbjct: 330 MKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKN 389
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ REM+ G P V+Y I+++A + ++A +++ ME +I+
Sbjct: 390 SAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGV 449
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + EA + F + +P YN ++ YC A R++ EM + G
Sbjct: 450 LIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG 509
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ PN +Y+ + L K + EA + K M + G +P++S + ++ +
Sbjct: 510 MVPNVASYNSTIQILCKDEKWTEAEVLLKDMI-ELGLKPSISIWNMISK 557
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 103/250 (41%), Gaps = 35/250 (14%)
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL------------ 121
D F V+ + +INAH ++ ++A+ F +M P + F L
Sbjct: 89 DSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEK 148
Query: 122 ----------------------INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
I G L + + GQ ++ G P Y ++
Sbjct: 149 AWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG 208
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
C + I ++ +M + + N TY ++++ K G ++ ++++M + G P
Sbjct: 209 CCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM-KLTGIVP 267
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY ++ C + +++ A ++DEM+ RGV + Y+TLI LC E ++ +A +
Sbjct: 268 NVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLM 327
Query: 280 QEMLDIGIRP 289
M G+ P
Sbjct: 328 CRMKRDGLSP 337
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FGL+ F L+ LC+ +HVE A+ +F K+ DIK + ++L GW N
Sbjct: 165 EFGLELNSEAFRTLLMWLCRYKHVEDAEALFHNSVKKGLRADIKMWNVILNGWCVLGNSH 224
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
V+R++ +PD+ +Y I A + A++LFR M KP I +I
Sbjct: 225 EAKRVWRDIVASPCKPDIFTYATFIKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCII 284
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKCG 180
+ L +KR+ EAL+ F +RG EP TYN+++ C R+ Y ++DEM +K
Sbjct: 285 DALCFKKRIPEALEIFCDMSERGCEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGS 344
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY +L L + G E V +RM R G Y +V+R++ D
Sbjct: 345 CLPNAVTYCYLLKSLKEPG---EVCRVLERMERN-GCGMNDDVYNMVLRLYMKWDDGDGV 400
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ W+EM+ G P Y+ +I+ + ++ DA +Y +EM+ G+ P
Sbjct: 401 RKTWEEMERNGWGPDRRSYTIMIHENFEKGRVKDAVRYLEEMISKGMVP 449
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 120/284 (42%), Gaps = 8/284 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRR---FDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++D L + R R VF + + P +++ G+ + +++V EM
Sbjct: 70 VLDVLRRHRSDWRPAHVFFNWASKTTTGYQPSSDVCNEIVDILGKMQRFQELHQVLDEMS 129
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D + ++ A + DEA++LF + + + F TL+ L K +
Sbjct: 130 KREELLDEAVFATLVRRFVGAHKVDEAIQLFYRRKEFGLELNSEAFRTLLMWLCRYKHVE 189
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A F S K+G + +N ++ +C ++A R+ ++ P+ TY +
Sbjct: 190 DAEALFHNSVKKGLRADIKMWNVILNGWCVLGNSHEAKRVWRDIVASPCKPDIFTYATFI 249
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K G+ A +F+ M K G +P V ++ C+ ++ A+ I+ +M RG
Sbjct: 250 KALTKKGKLGTALKLFRGMWDK-GGKPDVVICNCIIDALCFKKRIPEALEIFCDMSERGC 308
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
P + Y++LI +C ++ K E++D R G N
Sbjct: 309 EPNVATYNSLIKYMCKIQRM----KKVYELVDEMERKKGSCLPN 348
>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 600
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + N +I+ LC+ H V M K +P I ++ ++ G + N
Sbjct: 109 MSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGN 168
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +KD G+E D + G + N C A+ ++ME NC +
Sbjct: 169 VAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSG 228
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL + + EAL F Q +G +P+ TYN ++ C R +A ++ M + G
Sbjct: 229 VVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKG 288
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ +T++++ K G A S+F M G E V TY ++ C Q+ A
Sbjct: 289 IMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHM-GIEHDVVTYTSIIGAHCMLNQMKDA 347
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M ++D M ++G LP + Y++LI+ C ++ A + EM++ G+ P +S L
Sbjct: 348 MEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGG 407
Query: 301 LRDEG 305
+ G
Sbjct: 408 VCKAG 412
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ +L +N LI LC + A + M ++ PD++++ ++ + + +
Sbjct: 253 GIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRA 312
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M G E DVV+Y +I AHC + +A+E+F M + C P+ + +LI+G
Sbjct: 313 KSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHG 372
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K +++A+ F G+ G +P T++ ++G C + + A + M K G PN
Sbjct: 373 WCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPN 432
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+T I+L L K EA S+F+ + + + I+ M C + +++ A+ ++
Sbjct: 433 LQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGM-CSSGKLNDALELF 491
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ ++GV + Y+ +I LC E LDDA +M + G P ++ Q L
Sbjct: 492 SYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGL 548
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ + +I C ++ A EVFD M + P+I +YT L+ GW + KN
Sbjct: 319 MVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKN 378
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM ++G +P+VV++ +I C A + A ELF M P+
Sbjct: 379 MNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAI 438
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL SEA+ F + +K ++ YN ++ C S ++NDA + + G
Sbjct: 439 ILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKG 498
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + TY+I++ L K G ++A + +M G P TY + V+ Q+ +
Sbjct: 499 VKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEEN-GCPPNECTYNVFVQGLLRRYQISKS 557
Query: 241 MRIWDEMKARG 251
+ MK +G
Sbjct: 558 TKYLMFMKDKG 568
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 7/236 (2%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P V + ++ + K Y A+ L + M KP+ H +IN L RLS A+
Sbjct: 81 PCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTVHTLNIVINCLC---RLSHAVFG 137
Query: 138 F---GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
F G K G EP T+N +V C + A R +D ++ G ++ T + +
Sbjct: 138 FSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNG 197
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K G + A S K+M K V+ Y VV C + V A+ ++ +M +G+ P
Sbjct: 198 LCKVGHSSAALSYLKKMEEK-NCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQP 256
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ Y+ LI+ LC+ D+ +A M+ GI P Q F+ + GM A
Sbjct: 257 DLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRA 312
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 134/339 (39%), Gaps = 36/339 (10%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+ + LCK H A KM+++ + D+ +Y+ +++G + + ++ +M G
Sbjct: 194 ITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKG 253
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD+ +Y +I+ C+ R+ EA L M P F + +S A
Sbjct: 254 IQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAK 313
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
F G E + TY +++GA+C ++ DA + D M G PN TY ++H
Sbjct: 314 SIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGW 373
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+ +A M G +P V T+ ++ C + A ++ M G LP
Sbjct: 374 CETKNMNKAMYFLGEMVNN-GLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPN 432
Query: 256 MHMYSTLINSL-----------------------------------CHEDKLDDACKYFQ 280
+ + +++ L C KL+DA + F
Sbjct: 433 LQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFS 492
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ G++ ++ + + L EG+ + A L K+++
Sbjct: 493 YLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEE 531
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 1/284 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ FN + K+ + RA+ +F M + D+ +YT ++ +
Sbjct: 288 GIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDA 347
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EV+ M G P++V+Y +I+ C K ++A+ EM P+ + TLI G
Sbjct: 348 MEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGG 407
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + A + F K G P T ++ ++A + E+ K N
Sbjct: 408 VCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLN 467
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+I+L + +G+ +A +F +S K G + V TY I+++ C +D A +
Sbjct: 468 IIIYNIILDGMCSSGKLNDALELFSYLSSK-GVKIDVVTYNIMIKGLCKEGLLDDAEDLL 526
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+M+ G P Y+ + L ++ + KY M D G +
Sbjct: 527 MKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQ 570
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ------ 58
GL + ++ LI +CK+ A+E+F M K P++++ I+L+G +
Sbjct: 393 GLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEA 452
Query: 59 ----KNLLSMN-------------------------EVYREMKDDGFEPDVVSYGIMINA 89
+ L MN E++ + G + DVV+Y IMI
Sbjct: 453 MSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKG 512
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C D+A +L +ME C P+ + + GL ++S++ ++ K +GF+ +
Sbjct: 513 LCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQAD 572
Query: 150 APTYNAVVGAY 160
A T ++ +
Sbjct: 573 ATTTKFLINYF 583
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
D Y M M+ P + ++++ + K A S+ K MS G +PTV T IV
Sbjct: 69 DFYHKMVTMKP---FPCVKDFNLLFSIVAKMKHYTTAISLIKHMSY-IGVKPTVHTLNIV 124
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ C + + M GV P + ++T++N LC E + A ++ + D+G
Sbjct: 125 INCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGY 184
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ L G A+ +K+++
Sbjct: 185 ESDSYTCGAITNGLCKVGHSSAALSYLKKMEE 216
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 149/320 (46%), Gaps = 39/320 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++D LCK+ + A ++ D+M+ + P+I +Y +++EG +++ L ++ EM
Sbjct: 83 YTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 142
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G+ PDVV+Y I C R DEA + M T P + T+INGL L
Sbjct: 143 VRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLD 199
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY---- 188
A + Q RG P+ TY++++ +C + A ++D M K G PN Y
Sbjct: 200 SASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLL 259
Query: 189 --------------------------DIVLHH-----LIKAGRTEEAYSVFKRMSRKPGT 217
D+V ++ L KA R ++A +VF RM + G
Sbjct: 260 GALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER-GC 318
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P S+Y ++V C ++D A+ + ++ + + + + +Y+ L++ LC + D+AC
Sbjct: 319 TPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACA 378
Query: 278 YFQEMLDIGIRPPGQLFSNL 297
F ++LD I P F N+
Sbjct: 379 LFSKVLDEKICEPDVFFYNV 398
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 162/357 (45%), Gaps = 46/357 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+ LC+S +E+A+++ +MK+ PD Y L+ G+ + K+ + EM
Sbjct: 13 FAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMV 72
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ P VV+Y +++ C A R +AV+L EM C P+ + + ++ GL E++L
Sbjct: 73 KNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLD 132
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + RG+ P+ TYN+ + C R+++A + + M + P+ +Y V+
Sbjct: 133 EAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVI 189
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD------- 245
+ L K+G + A + +M+ + G P V TY ++ FC +V+ AM + D
Sbjct: 190 NGLCKSGDLDSASRMLDQMTNR-GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGC 248
Query: 246 ----------------------------EMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
EM+ RG P + Y+ I+ LC +++ A
Sbjct: 249 RPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKA 308
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA-------QKIDKLRKTPLVD 327
F M++ G P +S L + L + + A+ L Q +D L T L+D
Sbjct: 309 VFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLD 365
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 131/270 (48%), Gaps = 4/270 (1%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M + PD ++ ILL G + L ++ MK+ G PD Y +I+ + AK
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+ +A + EM +C P+ + +++GL R +A++ + + +G P TYN
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
+V C ++++A +M++EM G P+ TY+ + L K R +EA RM P
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
T P V +Y V+ C + +D A R+ D+M RG P + YS+LI+ C +++ A
Sbjct: 178 VT-PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
ML +G RP +++L AL G
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLG 266
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 159/362 (43%), Gaps = 42/362 (11%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+++ ++ PD +N I LCK V+ A++ +M PD+ SYT ++ G +
Sbjct: 138 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCK 194
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+L S + + +M + G PDVV+Y +I+ C + A+ L M C+P+
Sbjct: 195 SGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 254
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +L+ L + +A + ++RGF P+ +YNA + C + R+ A + D M
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 314
Query: 178 KCGIGPNTRTYD-----------------------------------IVLHHLIKAGRTE 202
+ G PN +Y ++L L K GR +
Sbjct: 315 ERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFD 374
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA ++F ++ + EP V Y +++ C Q+D A++I +M R V+ ++ L
Sbjct: 375 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVV-TWNIL 433
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
++ LC +D+L DA M+D G P + L A+ G A+ L ++ K
Sbjct: 434 VHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGC 493
Query: 323 TP 324
P
Sbjct: 494 VP 495
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 4/254 (1%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M D +PD ++ I++ C + + ++A +L M+ C P I+ LI+G K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+A +F + K P TY +V C + R DA +++DEMR G PN TY++
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ L + + +EA + + M+ + G P V TY ++ C +VD A + M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVR-GYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP-- 177
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
V P + Y+T+IN LC LD A + +M + G P +S+L G E A
Sbjct: 178 -VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236
Query: 311 VVLAQKIDKLRKTP 324
+ L + KL P
Sbjct: 237 MGLLDSMLKLGCRP 250
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 111/237 (46%), Gaps = 10/237 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++D+ CK R +++A ++ +M +R ++ ++ IL+ G L + M
Sbjct: 396 YNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMV 454
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D+GF PD V+YG +++A C + A+ELF E C P + LI GL E
Sbjct: 455 DEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAE 514
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI-V 191
EA F + + +NA++ Y + + ++ E+ + + PN RT+ +
Sbjct: 515 EAYLLFTK-------LDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEI 567
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
L+KA +A +F R + K G P + ++ +F ++ A RI+ MK
Sbjct: 568 SGKLVKAESLGKARGLFDR-AVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I+ LCK V A + D + PDI +Y L++G+ +Q L S E+ M
Sbjct: 403 YNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMW 462
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV++Y ++N C A + +E +E+F+ ME C P+ + +++ L K+++
Sbjct: 463 SQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVN 522
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-CGIGPNTRTYDIV 191
EA+ G+ K +G +P+ ++ + +C I+ AY++ M K + T TY+I+
Sbjct: 523 EAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNII 582
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ + A +F M + G +P TY +V+ FC + + E +
Sbjct: 583 VSAFSEQLNMNMAMKLFSVM-KNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR 641
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+P + + ++N LC +DK+ +A ML GI P
Sbjct: 642 FIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID CK V+ A V + F PD +Y L+ G+ + + V+++
Sbjct: 298 YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL 357
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P +V Y +I A++L EM C P+ + +INGL +S
Sbjct: 358 GKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + +G P+ TYN ++ YC ++++ A M++ M G+ P+ TY+ +L
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L KAG++EE +FK M K G P + TY I+V C +V+ A+ + EMK++G+
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEK-GCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P + + TL C +D A + F+ M
Sbjct: 537 KPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 147/310 (47%), Gaps = 2/310 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + +N LI L + + A ++ ++M + P+I +Y +++ G + +
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + + G PD+ +Y +I+ +C + D A E+ M + P + TL+NG
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG 479
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + E ++ F +++G P TYN +V + C + ++N+A ++ EM+ G+ P+
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++ + K G + AY +F+RM ++ T +TY I+V F ++MAM+++
Sbjct: 540 VVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLF 599
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL--R 302
MK G P + Y +I+ C + K+ E ++ P F + L +
Sbjct: 600 SVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVK 659
Query: 303 DEGMEETAVV 312
D+ E ++
Sbjct: 660 DKVHEAVGII 669
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 139/306 (45%), Gaps = 20/306 (6%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYT----ILLE-GWGQQKNLLSMNEVYREMKDDGFEPDV 80
V+ A + F++M DP + S+ IL+E G+ Q + +VY M+D G + DV
Sbjct: 92 VQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAH-----KVYMRMRDRGVQSDV 146
Query: 81 VSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ 140
+Y I I + C R A+ L R M C + +CT++ GL A + F +
Sbjct: 147 YTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDE 206
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG- 199
R P+ +N +V C + ++ R++ ++ K G+ PN T++I + L + G
Sbjct: 207 MLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGA 266
Query: 200 --------RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
R EA ++M G EP TY ++ +C V A R+ + +G
Sbjct: 267 LDRAVRNSRVVEAEEYLRKMVNG-GFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG 325
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P Y +LIN C + D A F++ L G+RP L++ L + L +G+ A+
Sbjct: 326 FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPAL 385
Query: 312 VLAQKI 317
L ++
Sbjct: 386 QLMNEM 391
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 1/220 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N L++ LCK+ E E+F M+++ P+I +Y I+++ + K +
Sbjct: 465 GMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEA 524
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCKPSPHIFCTLIN 123
++ EMK G +PDVVS+G + C D A +LFR ME + + + +++
Sbjct: 525 VDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVS 584
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ ++ A++ F K G +P+ TY V+ +C I Y+ + E + P
Sbjct: 585 AFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIP 644
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ T+ VL+ L + EA + M +K TV+T
Sbjct: 645 SLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVNT 684
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 136/298 (45%), Gaps = 10/298 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD + + N +++ L + + +A +V+ +M+ R D+ +YTI ++ + +
Sbjct: 102 MDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTAR 161
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R M + G + + V+Y ++ + +D A ELF EM A P F
Sbjct: 162 PYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNK 221
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC---------WSMRINDAYR 171
L++ L + + E+ + G+ KRG P T+N V C + R+ +A
Sbjct: 222 LVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEE 281
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ +M G P+ TY+ ++ K G ++A V K K G +P TY ++ F
Sbjct: 282 YLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFK-GFKPDEFTYCSLINGF 340
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C + D AM ++ + +G+ P + +Y+TLI L + + A + EM + G P
Sbjct: 341 CKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLP 398
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 24/300 (8%)
Query: 28 RAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
+A E+F+ K F +Y +++ G M ++ EM+++ V+ ++
Sbjct: 22 KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMREN------VNNALL 75
Query: 87 INAHCSA-KRY------DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
A+ A K Y EAV+ F M+ NC PS H ++N L ++A + +
Sbjct: 76 EGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYM 135
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
+ + RG + + TY + ++C + R A R++ M + G N Y V+ L +G
Sbjct: 136 RMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSG 195
Query: 200 RTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMY 259
+ A +F M + P V + +V + C V + R+ ++ RGV P + +
Sbjct: 196 EHDHARELFDEMLARCLC-PDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTF 254
Query: 260 STLINSLCHEDKLDDACK---------YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ + LC E LD A + Y ++M++ G P ++++ +GM + A
Sbjct: 255 NIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA 314
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 157/342 (45%), Gaps = 36/342 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI+ K V +A EV +M+ ++K+Y++L+ G+ + K+ +
Sbjct: 83 GLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANA 142
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ ++ DG +PDVV Y +I A C + D AV +EM+ KP+ F +I+G
Sbjct: 143 FAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG 202
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + +AL F + G P TYNA++ ++ A +++DEM G+ PN
Sbjct: 203 FARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPN 262
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------------ 232
TY ++H G T +A++ F ++ R G + V TYE +++ C
Sbjct: 263 EHTYTTIMHGYASLGDTGKAFAYFTKL-RDEGLQLDVYTYEALLKACCKSGRMQSALAVT 321
Query: 233 --------------YNAQVDMAMR---IWD------EMKARGVLPVMHMYSTLINSLCHE 269
YN +D R +W+ +MK GV P +H Y++ IN+
Sbjct: 322 KEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKA 381
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ A K +EM +G++P + ++ L + E A+
Sbjct: 382 GDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKAL 423
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 151/309 (48%), Gaps = 9/309 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWG----QQKNLLSMNEVY 68
+ +I C+ ++++A+ + +M++ D I Y +++G+ + K LL V+
Sbjct: 21 YGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLL----VF 76
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
K+ G P V++YG +IN + + +A+E+ +EME K + + LING
Sbjct: 77 ERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKL 136
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
K + A F K G +P+ YN ++ A+C +++ A + EM+K P TRT+
Sbjct: 137 KDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTF 196
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
++H + G ++A VF M R G PTV TY ++ +++ A +I DEM
Sbjct: 197 MPIIHGFARKGEMKKALDVFDMM-RMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 255
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
GV P H Y+T+++ A YF ++ D G++ + L +A G +
Sbjct: 256 LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQ 315
Query: 309 TAVVLAQKI 317
+A+ + +++
Sbjct: 316 SALAVTKEM 324
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 144/299 (48%), Gaps = 1/299 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+K ++ +N +I C ++RA +M+K+R P +++ ++ G+ ++ +
Sbjct: 151 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMK 210
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+V+ M+ G P V +Y +I ++ ++A ++ EM P+ H + T++
Sbjct: 211 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 270
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G S +A +F + + G + + TY A++ A C S R+ A + EM I
Sbjct: 271 HGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 330
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
NT Y+I++ + G EA + ++M R+ G +P + TY + + A +
Sbjct: 331 RNTFIYNILIDGWARRGDVWEAADLMQQMKRE-GVQPDIHTYTSFINACSKAGDMQRATK 389
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+EMK+ GV P + Y+TLIN + A F+EM G++P ++ L +L
Sbjct: 390 TIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSL 448
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI L + R +E+A+++ D+M P+ +YT ++ G+ + + +++
Sbjct: 231 YNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLR 290
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D+G + DV +Y ++ A C + R A+ + +EM A N + I+ LI+G +
Sbjct: 291 DEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVW 350
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA Q K+ G +P+ TY + + A + + A + ++EM+ G+ PN +TY ++
Sbjct: 351 EAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLI 410
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ +A E+A S F+ M + G +P + Y ++ A V
Sbjct: 411 NGWARASLPEKALSCFEEM-KLSGLKPDRAVYHCLMTSLLSRATV 454
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 52/296 (17%)
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
S + ++E K+ + + YG +I A+C D+A L REME I+ T++
Sbjct: 1 SADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMM 60
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G + L F + K+ G P TY ++ Y +++ A + EM GI
Sbjct: 61 DGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIK 120
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD---- 238
N +TY ++++ +K A+++F+ + K G +P V Y ++ FC ++D
Sbjct: 121 HNMKTYSMLINGFLKLKDWANAFAIFEDLI-KDGIKPDVVLYNNIITAFCGMGKMDRAVC 179
Query: 239 -------------------------------MAMRIWDEMKARGVLPVMHMYSTLINSLC 267
A+ ++D M+ G +P +H Y+ LI L
Sbjct: 180 TVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLV 239
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA----------------LRDEGME 307
+ K++ A + EM G+ P ++ + LRDEG++
Sbjct: 240 EKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQ 295
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID + V A ++ +MK+ PDI +YT + + ++ + EMK
Sbjct: 336 YNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMK 395
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+V +Y +IN A ++A+ F EM+ + KP ++ L+ L S ++
Sbjct: 396 SVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRATVA 455
Query: 133 EALQFFG 139
+ G
Sbjct: 456 HGCIYPG 462
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 147/314 (46%), Gaps = 1/314 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + LI+ LCK+ + + K++ PD+ Y ++ + K L
Sbjct: 157 GFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDA 216
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+VY EM G PDVV+Y +I+ C EA L EM+ N P+ F LI+
Sbjct: 217 CDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDA 276
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E ++ EA K +P+ TYN+++ Y + A + M + G+ P+
Sbjct: 277 LSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPD 336
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ Y +++ L K +EA S+F+ M K P + TY ++ C N ++ A+ +
Sbjct: 337 VQCYTNMINGLCKTKMVDEAMSLFEEMKHK-NMIPDIVTYNSLIDGLCKNHHLERAIALC 395
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
MK +G+ P ++ Y+ L++ LC +L+DA + FQ +L G ++ L L
Sbjct: 396 KRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKA 455
Query: 305 GMEETAVVLAQKID 318
G + A+ L K++
Sbjct: 456 GFFDEALDLKSKME 469
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 151/307 (49%), Gaps = 3/307 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++ +K ++ +N +I++LCK++ + A +V+ +M + PD+ +YT L+ G+ +
Sbjct: 188 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGH 247
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + EMK P+V ++ I+I+A + EA L M KP + +
Sbjct: 248 LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNS 307
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + A F +RG P+ Y ++ C + +++A + +EM+
Sbjct: 308 LIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKN 367
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ L K E A ++ KRM ++ G +P V +Y I++ C + +++ A
Sbjct: 368 MIPDIVTYNSLIDGLCKNHHLERAIALCKRM-KEQGIQPDVYSYTILLDGLCKSGRLEDA 426
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I+ + A+G +H Y+ LIN LC D+A +M D G P F + +A
Sbjct: 427 KEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRA 486
Query: 301 L--RDEG 305
L +DE
Sbjct: 487 LFEKDEN 493
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 1/315 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G N LI LC +++A D++ + F D SY L+ G +
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ + R+++ +PDVV Y +IN+ C K +A +++ EM P + TLI
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G L EA + K + P T+N ++ A ++ +A ++ M K I
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIK 299
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ TY+ ++ + A VF M+++ G P V Y ++ C VD AM
Sbjct: 300 PDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQR-GVTPDVQCYTNMINGLCKTKMVDEAMS 358
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+++EMK + ++P + Y++LI+ LC L+ A + M + GI+P ++ L L
Sbjct: 359 LFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLC 418
Query: 303 DEGMEETAVVLAQKI 317
G E A + Q++
Sbjct: 419 KSGRLEDAKEIFQRL 433
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 137/283 (48%), Gaps = 1/283 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ + LI C H++ A + ++MK + +P++ ++ IL++ ++ +
Sbjct: 227 GISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEA 286
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M +PDV +Y +I+ + A +F M P + +ING
Sbjct: 287 KILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMING 346
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L K + EA+ F + K + P+ TYN+++ C + + A + M++ GI P+
Sbjct: 347 LCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPD 406
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+L L K+GR E+A +F+R+ K G V Y +++ C D A+ +
Sbjct: 407 VYSYTILLDGLCKSGRLEDAKEIFQRLLAK-GYHLNVHAYTVLINRLCKAGFFDEALDLK 465
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+M+ +G +P + +I +L +D+ D A K +EM+ G+
Sbjct: 466 SKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID L K ++ A+ + M K PD+ +Y L++G+ + V+ M
Sbjct: 270 FNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMA 329
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PDV Y MIN C K DEA+ LF EM+ N P + +LI+GL L
Sbjct: 330 QRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 389
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+ + K++G +P+ +Y ++ C S R+ DA + + G N Y +++
Sbjct: 390 RAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLI 449
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ L KAG +EA + +M K G P T++I++R + D A +I EM ARG+
Sbjct: 450 NRLCKAGFFDEALDLKSKMEDK-GCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508
Query: 253 L 253
L
Sbjct: 509 L 509
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 140/340 (41%), Gaps = 36/340 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN ++ +L ++H +F + + PD+ + +IL+ + Q ++ V+ +
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF P+ ++ +I C +A+ ++ A + + TLINGL
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + + +P+ YN ++ + C + + DA + EM GI P+ TY ++
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV------------------------ 228
H G +EA+S+ M K P V T+ I++
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLK-NINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACI 298
Query: 229 --RMFCYNAQVD---------MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+F YN+ +D A ++ M RGV P + Y+ +IN LC +D+A
Sbjct: 299 KPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMS 358
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
F+EM + P +++L L E A+ L +++
Sbjct: 359 LFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRM 398
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 115/261 (44%), Gaps = 1/261 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A F+ M R P + +L K+ ++ ++++ + +G PD+ + I+IN
Sbjct: 41 AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C A +F + P+ TLI GL + +AL F Q +GF+
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ +Y ++ C + R++ ++ + P+ Y+ +++ L K +A V+
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K G P V TY ++ FC + A + +EMK + + P + ++ LI++L
Sbjct: 221 SEMIVK-GISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK 279
Query: 269 EDKLDDACKYFQEMLDIGIRP 289
E K+ +A M+ I+P
Sbjct: 280 EGKMKEAKILLAVMMKACIKP 300
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K +K ++ +N LID V+ A+ VF M +R PD++ YT ++ G + K
Sbjct: 293 MMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKM 352
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EMK PD+V+Y +I+ C + A+ L + M+ +P + +
Sbjct: 353 VDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTI 412
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL RL +A + F + +G+ Y ++ C + ++A + +M G
Sbjct: 413 LLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKG 472
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
P+ T+DI++ L + ++A + + M
Sbjct: 473 CMPDAVTFDIIIRALFEKDENDKAEKILREM 503
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 97/181 (53%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ + +I+ LCK++ V+ A +F++MK + PDI +Y L++G + +
Sbjct: 328 MAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHH 387
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + MK+ G +PDV SY I+++ C + R ++A E+F+ + A + H +
Sbjct: 388 LERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTV 447
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN L EAL + + +G P+A T++ ++ A + A +++ EM G
Sbjct: 448 LINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507
Query: 181 I 181
+
Sbjct: 508 L 508
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K +PD +N LID LCK+ H+ERA + +MK++ PD+ SYTILL+G + L
Sbjct: 366 KNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLED 425
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E+++ + G+ +V +Y ++IN C A +DEA++L +ME C P F +I
Sbjct: 426 AKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIR 485
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPE 149
L + +A + + RG E
Sbjct: 486 ALFEKDENDKAEKILREMIARGLLKE 511
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
AV F M P F +++ L + K + F Q + G P+ T + ++
Sbjct: 41 AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
+C I A+ + + K G PN T + ++ L G ++A ++ + G +
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQ-GFQ 159
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
+Y ++ C + R+ +++ V P + MY+T+INSLC L DAC
Sbjct: 160 LDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDV 219
Query: 279 FQEMLDIGIRPPGQLFSNL 297
+ EM+ GI P ++ L
Sbjct: 220 YSEMIVKGISPDVVTYTTL 238
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 147/307 (47%), Gaps = 7/307 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + N L++ LC V V + +R + PDI +YT L++G + +
Sbjct: 126 GISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA 185
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------EATNCKPSPHIF 118
++ M+ G P+ ++YG ++ C A++L +EM N KP +
Sbjct: 186 ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISY 245
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+ L ++R EA F + K +G P +Y +++ +C + +A R+ +EM
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVN 305
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ PN T+++++ L K G+ EA + + M ++ G P + TY ++ FC ++
Sbjct: 306 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR-GIVPNLLTYNSLIEGFCLVGDLN 364
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++ M ++G P + Y+ LIN C K+++A K + ML +G RP + + L
Sbjct: 365 SARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALL 424
Query: 299 QALRDEG 305
L G
Sbjct: 425 TGLFQGG 431
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 141/279 (50%), Gaps = 1/279 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + FN LID LCK V A+++ + M +R P++ +Y L+EG+ +L S
Sbjct: 307 GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSA 366
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ M G EPDV+ Y ++IN +C + +EA++L+ M +P + L+ G
Sbjct: 367 RELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTG 426
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ +A + FG K G + Y + C + + +A + ++++ I +
Sbjct: 427 LFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLD 486
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++ ++ L KAG+ E A+ +F+++ ++ +P V TY I++ FC QV A ++
Sbjct: 487 IECFNCLIDGLCKAGKLETAWELFEKLPQEE-LQPDVVTYNIMIHEFCRGGQVVKANILF 545
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+M+ G P Y+TLI KL+ + M+
Sbjct: 546 QKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMV 584
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 155/313 (49%), Gaps = 1/313 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
++ +ID LCK R + A+++F++MK + P + SYT L+ G+ ++ EM
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G +P+VV++ ++I+ C + EA +L M P+ + +LI G L
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ A + F +G EP+ Y ++ YC + ++ +A ++ + M + G P+ +TY +
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 423
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
L L + G+ +A +F M + G + Y I + C N + AM +++++K+
Sbjct: 424 LTGLFQGGKVGDAKKLFGVM-KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYN 482
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ + ++ LI+ LC KL+ A + F+++ ++P ++ + G A
Sbjct: 483 IKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKAN 542
Query: 312 VLAQKIDKLRKTP 324
+L QK++K TP
Sbjct: 543 ILFQKMEKNGCTP 555
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 150/330 (45%), Gaps = 7/330 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR------RFDPDIKSYTILLEG 54
M K G + L+ LC++ ++ A ++ +M F P + SY+I+++
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+ + +++ EMK G P V+SY +I+ C +++EA LF EM +P+
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
F LI+ L E ++ EA +RG P TYN+++ +C +N A +
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
M G P+ Y ++++ K + EEA ++ M + G P V TY ++
Sbjct: 372 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGM-LQVGKRPDVKTYGALLTGLFQG 430
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+V A +++ MK G+ +++Y +N LC L +A + F ++ I+ + F
Sbjct: 431 GKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECF 490
Query: 295 SNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ L L G ETA L +K+ + P
Sbjct: 491 NCLIDGLCKAGKLETAWELFEKLPQEELQP 520
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 135/277 (48%), Gaps = 9/277 (3%)
Query: 21 CKSRHVERAQ--EVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEP 78
CK+ ++ Q + F M P + S+T LL G + K+ + +Y +M+ G P
Sbjct: 70 CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
D + I++N C+ R E + + + P + TLI GL E R+S+A F
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189
Query: 139 GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK----CGIG--PNTRTYDIVL 192
+ +K G P A TY ++ C + I+ A ++ EM GI P +Y I++
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K R +EA +F+ M + G PTV +Y ++ FC + + A R+++EM +GV
Sbjct: 250 DALCKDRREDEARDLFEEM-KVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGV 308
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + ++ LI+ LC E K+ +A + M+ GI P
Sbjct: 309 QPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVP 345
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + ++ + LI+ CK+ VE A ++++ M + PD+K+Y LL G Q
Sbjct: 373 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ MK G D+ YGI +N C EA+ELF ++++ N K F
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 492
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL +L A + F + + +P+ TYN ++ +C ++ A + +M K G
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
P+ TY ++ ++ + E+ + M ++
Sbjct: 553 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 1/149 (0%)
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A++ M P ++ +L L K + + ++ +M R G P T I++
Sbjct: 80 AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQM-RLSGISPDCCTLNILL 138
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C +V + + + RG +P + Y+TLI LC E ++ A F M +G
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKI 317
P + L + L G A+ L Q++
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEM 227
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L+ ++ +N +I C+ V +A +F KM+K PD +Y L+ G+ + K L +
Sbjct: 518 LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVV 577
Query: 66 EVYREMKDDGFEPDV 80
E+ M DV
Sbjct: 578 ELLHMMVQRDVSLDV 592
>gi|240256396|ref|NP_199195.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635652|sp|P0C8R0.1|PP416_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g43820
gi|332007631|gb|AED95014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 546
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 2/322 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ FG+K FN L+ LC+ HV A+ VF+ KK D SY I++ GW + +
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
M +V +EM + GF PD +SY +I R +++VE+F ++ P +++ +
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAM 331
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I S + E+++++ + EP TY+ +V +++DA + +EM G+
Sbjct: 332 ICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGV 391
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P T L L G A ++++ SRK G + S Y+++++ + M +
Sbjct: 392 LPTTGLVTSFLKPLCSYGPPHAAMVIYQK-SRKAGCRISESAYKLLLKRLSRFGKCGMLL 450
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+WDEM+ G + +Y +++ LC L++A +E + G P ++S L L
Sbjct: 451 NVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKL 510
Query: 302 RDEGMEETAVVLAQKIDKLRKT 323
E A L KI K R T
Sbjct: 511 MASNKTELAYKLFLKIKKARAT 532
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 2/276 (0%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF 103
D+ SY+++L G++K M +V + M +G PD+ I +++ A+ELF
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
E E+ K S F L+ L +S A F +KK ++ +YN ++ +
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMISGWSKL 268
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ + +++ EM + G GP+ +Y ++ L + GR ++ +F + K G P +
Sbjct: 269 GEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK-GNVPDANV 327
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y ++ F D +MR + M P + YS L++ L K+ DA + F+EML
Sbjct: 328 YNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEML 387
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
G+ P L ++ + L G A+V+ QK K
Sbjct: 388 SRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRK 423
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 107/259 (41%), Gaps = 35/259 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + ++ LI+ L ++ + + E+FD +K + PD Y ++ + ++
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
YR M D+ EP++ +Y +++ ++ +A+E+F EM + P+ + +
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTS 400
Query: 121 LINGLGSE-----------------------------KRLSE------ALQFFGQSKKRG 145
+ L S KRLS L + + ++ G
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG 460
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+ + Y +V C + +A +M+E + G PN Y + L+ + +TE AY
Sbjct: 461 YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAY 520
Query: 206 SVFKRMSRKPGTEPTVSTY 224
+F ++ + TE S +
Sbjct: 521 KLFLKIKKARATENARSFW 539
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 151/307 (49%), Gaps = 5/307 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I CK+ ++ERA+ + M+++ + + Y +L++G+ + + V+R +K
Sbjct: 300 YNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLK 359
Query: 73 ---DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+ G P VVSYG +IN + + D+A+++ EME K + + +I+G
Sbjct: 360 ARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLG 419
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ A F G +P+ TYN ++ A+C + ++N A ++ M P RTY
Sbjct: 420 DTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYT 479
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
I++ +K G A+ + M + G P+ +TY +++ Q+D A I DEM
Sbjct: 480 IIIDGFMKIGDLRMAFETVRDM-KMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVV 538
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEE 308
GV P Y+TLI + A KYF + ++G++P +++L +A G M+
Sbjct: 539 AGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQS 598
Query: 309 TAVVLAQ 315
T + A+
Sbjct: 599 TLAITAE 605
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 154/331 (46%), Gaps = 7/331 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K + +N L++ CK+ + RA E+ +M+ P +++YTI+++G+ + +
Sbjct: 431 MSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGD 490
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E R+MK GF P +Y ++++ A + D A + EM P+ + T
Sbjct: 491 LRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTT 550
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + A ++F + K+ G +P+ Y +++ A C + R+ + EM G
Sbjct: 551 LIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAG 610
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N Y+I+L + G EA + ++M R G P + +Y + C + A
Sbjct: 611 VPMNNYIYNILLDGWAQRGDMWEASDIMQKM-RHEGLTPDIHSYTSFINACCKAGDMLKA 669
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++MK +GV P + Y+TLI+ + A + EM G+ P L+ + +
Sbjct: 670 TETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIMTS 729
Query: 301 LRDEGMEETAVVLAQKIDKLRK--TPLVDRG 329
L + AV D + + + +VD+G
Sbjct: 730 L----LSRAAVARETVFDGVLRVTSEMVDQG 756
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 155/343 (45%), Gaps = 36/343 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + + LI+ K +++A ++ ++M+ + + K+Y+++++G+ Q + +
Sbjct: 365 GLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANA 424
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ +M + G +PD ++Y I++NA C + + A+EL ME+ +C P+ + +I+G
Sbjct: 425 FSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDG 484
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L A + K GF P A TYN ++ + +++ A ++DEM G+ PN
Sbjct: 485 FMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPN 544
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
R+Y ++ G A+ F R+ ++ G +P V Y +++ C ++ + I
Sbjct: 545 ERSYTTLIEGYACIGDMGLAFKYFNRI-KEVGLKPDVIAYASLLKACCKAGRMQSTLAIT 603
Query: 245 DEMKARGV-----------------------------------LPVMHMYSTLINSLCHE 269
EM A GV P +H Y++ IN+ C
Sbjct: 604 AEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKA 663
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ A + ++M G++P Q ++ L E A++
Sbjct: 664 GDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALI 706
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 145/296 (48%), Gaps = 3/296 (1%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
H + A++V D K+ + P + +T+L+ +G++ + S + M+ G EP+V SY
Sbjct: 173 HPKDARKVVDAFKRIK-KPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYT 231
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
+I+A+ A+ A+ EMEA P+ + +I+G G + A ++F ++
Sbjct: 232 NLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSE 291
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
+ YN ++ AYC + + A +M M + G+ Y++++ + ++
Sbjct: 292 NWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKC 351
Query: 205 YSVFKRMSRK--PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
+VF+R+ + G PTV +Y ++ ++ ++D A++I +EM+ +G+ YS +
Sbjct: 352 LNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMI 411
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
I+ +A F++M + GI+P G ++ L A G A+ L +++
Sbjct: 412 IDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARME 467
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 151/321 (47%), Gaps = 5/321 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ + + LI ++ + A ++M+ P+ +Y++++ G+G+ +
Sbjct: 218 MRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGD 277
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ + + + V Y +I+A+C A + A + ME + + ++
Sbjct: 278 VEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNM 337
Query: 121 LINGLGSEKRLSEALQFFGQSKKR---GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
L++G + + + L F + K R G P +Y ++ Y +++ A ++ +EM
Sbjct: 338 LMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEME 397
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI N +TY +++ ++ G T A+SVF+ MS G +P TY I++ FC N Q+
Sbjct: 398 DQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMS-NAGIKPDGITYNILMNAFCKNGQM 456
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ A+ + M++ P + Y+ +I+ L A + ++M G RP ++ +
Sbjct: 457 NRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVI 516
Query: 298 KQALRDEG-MEETAVVLAQKI 317
L G M+ A ++ + +
Sbjct: 517 MHGLAQAGQMDRAASIIDEMV 537
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 133/300 (44%), Gaps = 4/300 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ ++ +I + VE A+ F + + + Y ++ + + N
Sbjct: 253 MEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGN 312
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA---TNCKPSPHI 117
+ + M++ G E + Y ++++ + + D+ + +FR ++A T P+
Sbjct: 313 MERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVS 372
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LIN ++ +ALQ + + +G + TY+ ++ Y +A+ + ++M
Sbjct: 373 YGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMS 432
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI P+ TY+I+++ K G+ A + RM PT+ TY I++ F +
Sbjct: 433 NAGIKPDGITYNILMNAFCKNGQMNRALELLARM-ESGDCPPTLRTYTIIIDGFMKIGDL 491
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
MA +MK G P Y+ +++ L ++D A EM+ G+ P + ++ L
Sbjct: 492 RMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTL 551
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 144/288 (50%), Gaps = 13/288 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M ++ +K ++ F+ L+D LCK V A VF KM + +PDI +Y+ L+ G
Sbjct: 305 MLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSL 364
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
W + LL+ EM PDVV++ I ++ C EA + M +P+
Sbjct: 365 WKESSTLLN------EMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPN 418
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +L++G ++ EA + F +G P+ +YN ++ YC S RI++A ++ D
Sbjct: 419 VVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFD 478
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM G+ PN+ T+ ++ L +AGR A +FK+M G P + TY ++ FC +
Sbjct: 479 EMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSH-GCPPDLITYSTLLSGFCKH 537
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+D A+ +++ +K + P + L+ +C KL+DA + F +
Sbjct: 538 GHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 149/297 (50%), Gaps = 5/297 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+++ LCK A KM + +P++ SY+I+++ + + + +++ M+ G
Sbjct: 215 IVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIG 274
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P VV+Y +I C++ ++ +A LF+EM N KP F L++ L E + EAL
Sbjct: 275 ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEAL 334
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
FG+ + EP+ TY++++ C S ++ +++EM I P+ T+ I +
Sbjct: 335 SVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVF 394
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G EA S+ M + G P V TY ++ +C ++Q+D A +++D M +G P
Sbjct: 395 CKKGMVSEAQSIINLMIER-GLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPD 453
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG----QLFSNLKQALRDEGMEE 308
+ Y+ LI C +++D+A + F EM G+ P L S L QA R +E
Sbjct: 454 VLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKE 510
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + +N LI +C S ++A +F +M + PD+ +++IL++ ++
Sbjct: 270 MRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGV 329
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L V+ +M EPD+V+Y +I+ C + + E+ L EM + N +P F
Sbjct: 330 VLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSI 389
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ + +SEA +RG P TYN+++ YC ++++A ++ D M G
Sbjct: 390 WVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y+I++ K+ R +EA +F MS K G P T+ ++ C + A
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK-GLTPNSITHTTLISGLCQAGRPYAA 508
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ +M + G P + YSTL++ C LD+A F+ + ++P
Sbjct: 509 KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKP 557
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 157/316 (49%), Gaps = 1/316 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
E+ ++ +ID+LCK+R V A ++F M+ P + +Y L+ G + ++
Sbjct: 243 EVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILF 302
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+EM + +PDVV++ I+++A C EA+ +F +M +P + +LI+G+
Sbjct: 303 KEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKS 362
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
E+ + R P+ T++ V +C +++A +++ M + G+ PN TY
Sbjct: 363 SLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTY 422
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++ + +EA VF M K G P V +Y I+++ +C + ++D A +++DEM
Sbjct: 423 NSLMDGYCLHSQMDEARKVFDIMVNK-GCAPDVLSYNILIKGYCKSERIDEAKQLFDEMS 481
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+G+ P ++TLI+ LC + A + F++M G P +S L G +
Sbjct: 482 HKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLD 541
Query: 309 TAVVLAQKIDKLRKTP 324
A+ L + + K + P
Sbjct: 542 EALALFEALKKSQLKP 557
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 139/297 (46%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ FG+ + LI+ LC V V K+ K F P I ++ L+ G +
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ E + G++P V ++ +++N C + A+ ++M +C+P +
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L + ++EA+ F + G P TYN+++ C S + A + EM +
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ I++ L K G EA SVF +M + EP + TY ++ C ++ +
Sbjct: 310 MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQ-IAMEPDIVTYSSLIHGVCKSSLWKES 368
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ +EM +R + P + +S ++ C + + +A M++ G+RP +++L
Sbjct: 369 STLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSL 425
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 9/320 (2%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+ FN+L+ L + +H + ++ KM+ + + TIL+ + V
Sbjct: 104 ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLG 163
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
++ GF+P ++++ +IN C R EA+E + + +P+ + ++NGL
Sbjct: 164 KIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIG 223
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ S A+ + + + EPE +Y+ ++ + C + +N+A + MR GI P TY+
Sbjct: 224 KTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYN 283
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ + +G+ ++A +FK M + +P V T+ I+V C V A+ ++ +M
Sbjct: 284 SLIYGMCNSGQWKQASILFKEM-LEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQ 342
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+ P + YS+LI+ +C ++ EML IRP FS +GM
Sbjct: 343 IAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGM--- 399
Query: 310 AVVLAQKIDKLRKTPLVDRG 329
V AQ I L +++RG
Sbjct: 400 -VSEAQSIINL----MIERG 414
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 107/207 (51%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
++ ++ F+ +D CK V AQ + + M +R P++ +Y L++G+ +
Sbjct: 380 IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEAR 439
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+V+ M + G PDV+SY I+I +C ++R DEA +LF EM P+ TLI+GL
Sbjct: 440 KVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGL 499
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R A + F + G P+ TY+ ++ +C +++A + + ++K + PN
Sbjct: 500 CQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNH 559
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMS 212
I+L + KAG+ E+A +F +S
Sbjct: 560 VICKILLGGMCKAGKLEDAKELFSSLS 586
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + + ++ A K YD V ++R+ME S + LIN L +
Sbjct: 102 PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSV 161
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G+ K GF+P T+N ++ C RI +A +D + G P T+ ++++ L K
Sbjct: 162 LGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCK 221
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G+T A K+M + EP V +Y I++ C N V+ A+ ++ M++ G+ P +
Sbjct: 222 IGKTSAAIVWMKKMV-ELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVV 280
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
Y++LI +C+ + A F+EML+ ++P FS L AL EG+ A+ + K+
Sbjct: 281 TYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKM 340
Query: 318 DKLRKTP 324
++ P
Sbjct: 341 IQIAMEP 347
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 2/292 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A F++M P I + LL + K+ S+ +YR+M+ G V + I+IN
Sbjct: 88 ALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILIN 147
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
C + ++ KPS F TLINGL E R+ EA++ RG++P
Sbjct: 148 CLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQP 207
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
T+ +V C + + A M +M + P +Y I++ L K EA +F
Sbjct: 208 TVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLF 267
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M R G PTV TY ++ C + Q A ++ EM + P + +S L+++LC
Sbjct: 268 YHM-RSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCK 326
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM-EETAVVLAQKIDK 319
E + +A F +M+ I + P +S+L + + +E++ +L + + +
Sbjct: 327 EGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSR 378
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N LI CKS ++ A+++FD+M + P+ ++T L+ G Q +
Sbjct: 449 GCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAA 508
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC-TLIN 123
E++++M G PD+++Y +++ C DEA+ LF ++ + KP+ H+ C L+
Sbjct: 509 KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPN-HVICKILLG 567
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEA 150
G+ +L +A + F +P+
Sbjct: 568 GMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 86/201 (42%), Gaps = 1/201 (0%)
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
GS +AL +F Q P +N ++ A + + +M G+ +
Sbjct: 80 GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSV 139
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T I+++ L +SV ++ K G +P++ T+ ++ C ++ AM D
Sbjct: 140 YTLTILINCLCHLHLVGLGFSVLGKI-FKLGFKPSIITFNTLINGLCIEGRIVEAMEQLD 198
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ +RG P ++ ++ ++N LC K A + ++M+++ P +S + +L
Sbjct: 199 YIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNR 258
Query: 306 MEETAVVLAQKIDKLRKTPLV 326
+ AV L + + +P V
Sbjct: 259 LVNEAVDLFYHMRSIGISPTV 279
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL LI LC++ A+E+F KM PD+ +Y+ LL G+ + +
Sbjct: 480 MSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGH 539
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
L ++ +K +P+ V I++ C A + ++A ELF + +P
Sbjct: 540 LDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQP 592
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G +L ++ L+ CK H++ A +F+ +KK + P+ ILL G +
Sbjct: 515 MGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGK 574
Query: 61 LLSMNEVYREMKDDGFEPDV 80
L E++ + + +PDV
Sbjct: 575 LEDAKELFSSLSIEELQPDV 594
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 154/322 (47%), Gaps = 38/322 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GLK ++ ++ LI C +E +E+FD+M +R+ P++ +Y+ L++G G+
Sbjct: 211 MEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGR 270
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+E+ ++M G PDVV+Y ++ + C R +A+++ M +P +
Sbjct: 271 WREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNV 330
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC-----------WSM----- 164
++NGL E R+ +A K+G +P+A TYN ++ C W +
Sbjct: 331 VVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEK 390
Query: 165 ---------------------RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
R++DA R+ M + G+ N TY+ ++ + A + E
Sbjct: 391 FHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIE 450
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++K + + G P TY +++ C + +A ++ +MK G+ P + Y+ L+
Sbjct: 451 ALKLWK-YAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALM 509
Query: 264 NSLCHEDKLDDACKYFQEMLDI 285
SLC ED L+ A FQEM ++
Sbjct: 510 TSLCREDSLEQARSLFQEMRNV 531
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 143/302 (47%), Gaps = 7/302 (2%)
Query: 10 LPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LP F + L ++ + H A V M KR F ++ + ++L+G+ +
Sbjct: 74 LPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMS 133
Query: 67 VYREMKD--DGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFCTLIN 123
++ +MK D PD V+Y ++N C AKR EA LF M+ +C+P+ + LI+
Sbjct: 134 LFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLID 193
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ E L + ++ G + + Y++++ A+C I + DEM + + P
Sbjct: 194 CYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSP 253
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY ++ L + GR EA + K M+ + G P V Y ++ C N + A+++
Sbjct: 254 NVVTYSCLMQGLGRTGRWREASEMLKDMTAR-GVRPDVVAYTVLADGLCKNGRAGDAIKV 312
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
D M +G P Y+ ++N LC ED++DDA + M+ G +P ++ L + L
Sbjct: 313 LDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCG 372
Query: 304 EG 305
G
Sbjct: 373 AG 374
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 146/311 (46%), Gaps = 8/311 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD---PDIKSYTILLEGWGQ 57
M K G + + N ++ C+S ++A +F +M KR +D PD +Y L+ G+ +
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM-KRNYDCVVPDCVTYNTLVNGFCK 161
Query: 58 QKNLLSMNEVYREMKDDG-FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
K L ++ MK G P++V+Y ++I+ +C + E + L EME K
Sbjct: 162 AKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVF 221
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
++ +LI+ E + + F + +R P TY+ ++ + R +A M+ +M
Sbjct: 222 VYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ P+ Y ++ L K GR +A V M +K G EP TY +VV C +
Sbjct: 282 TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK-GEEPGTLTYNVVVNGLCKEDR 340
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD--IGIRPPGQLF 294
+D A + + M +G P Y+TL+ LC K+ +A ++ +L ++P
Sbjct: 341 MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTC 400
Query: 295 SNLKQALRDEG 305
+NL Q L EG
Sbjct: 401 NNLIQGLCKEG 411
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 155/347 (44%), Gaps = 36/347 (10%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+ L ++ LID CKS V + ++M++ D+ Y+ L+ + + ++ + E
Sbjct: 182 RPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRE 241
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ EM P+VV+Y ++ R+ EA E+ ++M A +P + L +GL
Sbjct: 242 LFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLC 301
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R +A++ ++G EP TYN VV C R++DA+ +++ M K G P+
Sbjct: 302 KNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAV 361
Query: 187 TYDIVLHHLIKAGRTEEAYSVFK-RMSRKPGTEPTVSTYEIVVRMFC-----------YN 234
TY+ +L L AG+ EA ++K +S K +P V T +++ C ++
Sbjct: 362 TYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHS 421
Query: 235 AQVDM------------------------AMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
+ V+M A+++W G P YS +IN LC
Sbjct: 422 SMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQ 481
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
L A F +M D GIRP ++ L +L E E A L Q++
Sbjct: 482 MLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEM 528
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 128/290 (44%), Gaps = 5/290 (1%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P + LID L K+R + V+ KM P S + L E + + V
Sbjct: 43 PACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSL 102
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCK-PSPHIFCTLINGLGSE 128
M GF +V + +++ C + + D+A+ LF +M+ +C P + TL+NG
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKA 162
Query: 129 KRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
KRL+EA F KK G P TY+ ++ YC S + + +++EM + G+ +
Sbjct: 163 KRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFV 222
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ G E +F M R+ P V TY +++ + A + +M
Sbjct: 223 YSSLISAFCGEGDIETGRELFDEMLRRK-VSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
ARGV P + Y+ L + LC + DA K M+ G PG L N+
Sbjct: 282 TARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKG-EEPGTLTYNV 330
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 153/357 (42%), Gaps = 39/357 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ + L D LCK+ A +V D M ++ +P +Y +++ G ++
Sbjct: 281 MTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDR 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC- 119
+ V M G +PD V+Y ++ C A + EA++L++ + + P +F
Sbjct: 341 MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTC 400
Query: 120 -TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LI GL E R+ +A + + G + TYN ++ Y + ++ +A ++ +
Sbjct: 401 NNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVE 460
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------ 232
G PN+ TY ++++ L K A +F +M + G PTV Y ++ C
Sbjct: 461 SGFSPNSMTYSVMINGLCKMQMLSVARGLFCKM-KDSGIRPTVIDYNALMTSLCREDSLE 519
Query: 233 --------------------YNAQVDMAMRIWDEMKARGVLPVMHM---------YSTLI 263
+N +D ++ D A+ +L M M +S LI
Sbjct: 520 QARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILI 579
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV-VLAQKIDK 319
N LD+A +++M+ G P +F +L + +G E + +L Q DK
Sbjct: 580 NRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADK 636
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 127/267 (47%), Gaps = 1/267 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+KF +K ++ N LI LCK V A + M + +I +Y L+EG+ + L
Sbjct: 389 EKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKL 448
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ ++++ + GF P+ ++Y +MIN C + A LF +M+ + +P+ + L
Sbjct: 449 IEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNAL 508
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+ L E L +A F + + + ++N ++ + + A ++ EM +
Sbjct: 509 MTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDL 568
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ T+ I+++ K G +EA ++++M G P V ++ +++ + + + +
Sbjct: 569 VPDAVTFSILINRFSKLGMLDEAMGLYEKMV-SCGHVPGVVVFDSLLKGYGLKGETEKII 627
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCH 268
+ +M + V+ + ST++ LCH
Sbjct: 628 SLLHQMADKDVVLDSKLTSTILACLCH 654
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 4/216 (1%)
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
A++YD V ++ +M + P L + S A KRGF
Sbjct: 55 ARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYN 114
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRK---CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
N V+ +C S + + A + +M++ C + P+ TY+ +++ KA R EA +F+
Sbjct: 115 LNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVV-PDCVTYNTLVNGFCKAKRLAEARVLFE 173
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M + P + TY +++ +C + +V + + +EM+ G+ + +YS+LI++ C E
Sbjct: 174 AMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGE 233
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++ + F EML + P +S L Q L G
Sbjct: 234 GDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTG 269
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 84/173 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ + D+N L+ +LC+ +E+A+ +F +M+ + D+ S+ I+++G + +
Sbjct: 493 MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGD 552
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S E+ EM PD V++ I+IN DEA+ L+ +M + P +F +
Sbjct: 553 VKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDS 612
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM 173
L+ G G + + + Q + ++ + ++ C R D +++
Sbjct: 613 LLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKIL 665
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 99/230 (43%), Gaps = 3/230 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +I+ LCK + + A+ +F KMK P + Y L+ ++ +L +++EM+
Sbjct: 470 YSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMR 529
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ DVVS+ I+I+ A A EL EM + P F LIN L
Sbjct: 530 NVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLD 589
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+ + + G P +++++ Y ++ +M + +++ +L
Sbjct: 590 EAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTIL 649
Query: 193 HHLIKAGR---TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
L R E+ F + S T+ +E+++R+ ++ ++ +
Sbjct: 650 ACLCHMSRNLDVEKILPKFSQQSEHTSKGTTIKCHELLMRLNNFHPELKL 699
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 4/242 (1%)
Query: 89 AHCSAKRYDEAVELF-REMEATNCKPSPHIFC-TLINGLGSEKRLSEALQFFGQSKKRGF 146
AH +AV LF R ++ P C TLI+ L ++ + + +
Sbjct: 14 AHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALV 73
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P + +A+ ++ + + A+ ++ M K G G N ++VL ++G+ ++A S
Sbjct: 74 LPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMS 133
Query: 207 VFKRMSRK-PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG-VLPVMHMYSTLIN 264
+F +M R P TY +V FC ++ A +++ MK G P + YS LI+
Sbjct: 134 LFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLID 193
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
C ++ + +EM G++ ++S+L A EG ET L ++ + + +P
Sbjct: 194 CYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSP 253
Query: 325 LV 326
V
Sbjct: 254 NV 255
>gi|148906806|gb|ABR16549.1| unknown [Picea sitchensis]
Length = 524
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 160/324 (49%), Gaps = 6/324 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++++G Q++ N + C+ + + A E FDK+K++ PD +Y +LLEG + N
Sbjct: 198 IEQYGCPQDVVALNCFLSAFCRYKQSKEALEFFDKVKEK-IAPDADTYALLLEGLEIEGN 256
Query: 61 LLSMNEVYREMK-DDGFEPDVVS-YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ + EM G+ P+ S Y ++ + + +EA++ M+ C P F
Sbjct: 257 VSKARTTFGEMIIRHGWLPNNTSAYNAFLSTLVNGSQVEEALKFLAVMKTRKCLPDLGFF 316
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS--MRINDAYRMMDEM 176
+ L K A + K+ G + P+YN ++G +C + ++++ AYR++DEM
Sbjct: 317 RNTLQILYQRKDTKNAYGLWELMKQSGILLDLPSYNTMIGVFCSANPIQVDFAYRLLDEM 376
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
GI P+ +TY+ + LI A + EEA S+F+ M++ P + Y + ++M+
Sbjct: 377 VFTGIFPDFKTYNTIFEALITARKVEEASSIFREMTKNDFC-PLYANYVMAIKMYFEADD 435
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+MA+ +W M + + P + LI+ C + +A KY E + G++ P + +
Sbjct: 436 PEMAVMMWKHMIQKAIFPKSDCAAILIDGFCDLGRASEALKYSLEAITRGVQIPVETMTK 495
Query: 297 LKQALRDEGMEETAVVLAQKIDKL 320
LK A R G ++ L +K+ +
Sbjct: 496 LKNASRQAGKQDAYGQLEKKMKSI 519
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 114/262 (43%), Gaps = 13/262 (4%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINA---HCSAKRYDEAVELF 103
++ +L++ G++K +M + + MK+ G +VS M + + A + EA F
Sbjct: 140 AWNLLVDLLGKEKLFDAMWDCIKVMKNQG----IVSMETMSSVFGNYVQAGKVAEARMTF 195
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
+E C ++ K+ EAL+FF + K++ P+A TY ++
Sbjct: 196 DVIEQYGCPQDVVALNCFLSAFCRYKQSKEALEFFDKVKEK-IAPDADTYALLLEGLEIE 254
Query: 164 MRINDAYRMMDEM--RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
++ A EM R + NT Y+ L L+ + EEA M + P +
Sbjct: 255 GNVSKARTTFGEMIIRHGWLPNNTSAYNAFLSTLVNGSQVEEALKFLAVMKTRKCL-PDL 313
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED--KLDDACKYF 279
+ +++ A +W+ MK G+L + Y+T+I C + ++D A +
Sbjct: 314 GFFRNTLQILYQRKDTKNAYGLWELMKQSGILLDLPSYNTMIGVFCSANPIQVDFAYRLL 373
Query: 280 QEMLDIGIRPPGQLFSNLKQAL 301
EM+ GI P + ++ + +AL
Sbjct: 374 DEMVFTGIFPDFKTYNTIFEAL 395
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 164/318 (51%), Gaps = 1/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++++ ++ + ++ +ID LCK V+ A +++ +M + PD+ +Y+IL+ G+
Sbjct: 189 IERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQ 248
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM + PD+ +Y I+++A C + EA + M ++ T
Sbjct: 249 LNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYST 308
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ A + F + G P+ Y+ ++ C R+++A + +E+ +
Sbjct: 309 LMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKN 368
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+T TY ++ L K+GR + +F M + G P V TY ++ C N +D A
Sbjct: 369 MVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDR-GQPPDVITYNNLIDALCKNGHLDRA 427
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++++MK + + P ++ ++ L++ LC +L +A ++FQ++L G + ++ +
Sbjct: 428 IALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMING 487
Query: 301 LRDEGMEETAVVLAQKID 318
L EG+ + A+ L +++
Sbjct: 488 LCKEGLLDEALALQSRME 505
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 1/283 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
+ ++ + L+D LCK V+ A+ V M K + D+ Y+ L++G+ + +
Sbjct: 263 NINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNA 322
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G PDV Y IMIN C KR DEA+ LF E+ N P + +LI+
Sbjct: 323 KRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDC 382
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+S F + RG P+ TYN ++ A C + ++ A + ++M+ I PN
Sbjct: 383 LCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPN 442
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+ I+L L K GR + A F+ + K G V TY +++ C +D A+ +
Sbjct: 443 VYTFTILLDGLCKVGRLKNALEFFQDLLTK-GYCLNVRTYTVMINGLCKEGLLDEALALQ 501
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
M+ G + + +I + +D+ D A K +EM+ G+
Sbjct: 502 SRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 142/306 (46%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ ++ L+ C + RA ++ ++M +PDI +YTIL++ ++ +
Sbjct: 228 GISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEA 287
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V M DVV Y +++ +C + A +F M P H + +ING
Sbjct: 288 ENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMING 347
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L KR+ EAL F + ++ P+ TY +++ C S RI+ + + DEM G P+
Sbjct: 348 LCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPD 407
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L K G + A ++F +M + P V T+ I++ C ++ A+ +
Sbjct: 408 VITYNNLIDALCKNGHLDRAIALFNKM-KDQAIRPNVYTFTILLDGLCKVGRLKNALEFF 466
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++ +G + Y+ +IN LC E LD+A M D G F + +A D+
Sbjct: 467 QDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDK 526
Query: 305 GMEETA 310
+ A
Sbjct: 527 DENDKA 532
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 141/298 (47%), Gaps = 4/298 (1%)
Query: 11 PDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD+ N +I+ C V A K+ K + P+ + L++G + +
Sbjct: 91 PDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRF 150
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ ++ GF +SYGI+IN C A+ L R +E + +P+ I+ +I+ L
Sbjct: 151 HDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCK 210
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+ + EA + + +G P+ TY+ +V +C ++N A +++EM I P+ T
Sbjct: 211 DTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYT 270
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y I++ L K G+ +EA +V M K V Y ++ +C +V+ A R++ M
Sbjct: 271 YTILVDALCKEGKVKEAENVLAVMV-KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTM 329
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
GV P +H YS +IN LC ++D+A F+E+ + P +++L L G
Sbjct: 330 TQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSG 387
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 123/253 (48%), Gaps = 36/253 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ ++ +I+ LCK + V+ A +F+++ ++ PD +YT L++ +
Sbjct: 329 MTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR 388
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +++ EM D G PDV++Y +I+A C D A+ LF +M+ +P+ + F
Sbjct: 389 ISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTI 448
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL RL AL+FF +G YC ++
Sbjct: 449 LLDGLCKVGRLKNALEFFQDLLTKG--------------YCLNV---------------- 478
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
RTY ++++ L K G +EA ++ RM G T+EI++R F + D A
Sbjct: 479 -----RTYTVMINGLCKEGLLDEALALQSRMEDN-GCISDAVTFEIMIRAFFDKDENDKA 532
Query: 241 MRIWDEMKARGVL 253
++ EM ARG+L
Sbjct: 533 EKLVREMIARGLL 545
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 148/365 (40%), Gaps = 44/365 (12%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRH--------VERAQEVFDKMKKRRFDPDIKSYTILLEG 54
++ L +P+F + LC H + A F+ M P + +L
Sbjct: 8 RYCLSLSIPNFPPFLPNLCFHSHSLPPLTHNADDAVSQFNHMFHVHPTPHTFHFNKILIS 67
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
K + +Y++M+ EPD + I+IN C + A ++ +P+
Sbjct: 68 LVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPN 127
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
TL+ GL E ++ EAL+F + +GF +Y ++ C A R++
Sbjct: 128 TITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLR 187
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
+ + I PN Y +++ L K +EAY ++ M K G P V TY I+V FC
Sbjct: 188 RIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGK-GISPDVVTYSILVSGFCIV 246
Query: 235 AQVDMAMRIWDEM--------------------------KARGVLPVMH---------MY 259
Q++ A+ + +EM +A VL VM +Y
Sbjct: 247 GQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVY 306
Query: 260 STLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
STL++ C +++++A + F M +G+ P +S + L + A+ L ++I +
Sbjct: 307 STLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQ 366
Query: 320 LRKTP 324
P
Sbjct: 367 KNMVP 371
>gi|242041823|ref|XP_002468306.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
gi|241922160|gb|EER95304.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
Length = 519
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 150/308 (48%), Gaps = 5/308 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ TLC+ + + A+ VF +K F + ++ ILL GW K+ EM+
Sbjct: 185 FNALLRTLCQEKSMSDARNVFHALKYD-FRVNRHTFNILLSGW---KSAEDAEAFVAEMR 240
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G EPD+V+Y +I+ HC + ++A +L EM + P + +LI GLG +
Sbjct: 241 ELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDISPDIITYTSLIGGLGLIGQPD 300
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + G P+ P YNA + + + R+ DA+ +MD+M G+ PN TY++
Sbjct: 301 KARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFALMDQMASKGLMPNPTTYNLFF 360
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
A + +++RM R G P + ++R+ +V A+ +W +M +
Sbjct: 361 RCYYWAFDIGSTWRLYERM-RSEGCFPNTQSCMFIIRLCHRYGKVGQALELWSDMVSNRF 419
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ L + LC E KL++ + F +M++ G +P F +K ++ EE+
Sbjct: 420 GSFTLVSDVLFDLLCDEGKLEEVERCFCQMVEFGQKPSNVAFRRIKILMQVAKQEESIAR 479
Query: 313 LAQKIDKL 320
L +K+ +
Sbjct: 480 LTEKMAQF 487
>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 5/277 (1%)
Query: 21 CKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDV 80
CK VE AQ +F ++K + PD +Y IL GW + +N V EM + G PD
Sbjct: 359 CKCSLVEDAQAMFRRVKNK-VKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDS 417
Query: 81 VSYGIMINAHCSAKRYDEAVELFREME---ATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
+Y I++ C A EA ELF M +T P+ + +I L R E +
Sbjct: 418 FTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKL 477
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G P+ TY V+ C + ++ +AY+ ++EM G P+ TY+ L L +
Sbjct: 478 IKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCE 537
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
++EEA ++ RM + G P+V T+ +++ MF + D A W EM RG
Sbjct: 538 NKKSEEALGLYGRMI-EAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTD 596
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
Y +I L + +K++DAC E+++ GI+ P + F
Sbjct: 597 TYCVMIEGLFNCNKMEDACFLLDEVINKGIKLPYRKF 633
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 119/246 (48%), Gaps = 5/246 (2%)
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
+P++ + ++++A C ++A +FR ++ KP + + L G + S ++
Sbjct: 345 QPEINALNLLLDALCKCSLVEDAQAMFRRVK-NKVKPDANTYNILFFGWCRVRNPSRGMR 403
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI---GPNTRTYDIVLH 193
+ + G P++ TYN + ++C + + +A + + MR G P +TY I++
Sbjct: 404 VLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMIL 463
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+++ RTEE + + K M G P VSTY+ V+ C +V+ A + +EM +G
Sbjct: 464 ALVQSDRTEECFKLIKDMINS-GVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYR 522
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y+ ++ LC K ++A + M++ G P F+ L + G + A
Sbjct: 523 PDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFET 582
Query: 314 AQKIDK 319
++DK
Sbjct: 583 WHEMDK 588
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKR---RFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+N ID+ CK+ V A E+F+ M+ + P K+Y I++ Q ++ +
Sbjct: 420 YNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIK 479
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M + G PDV +Y +I C A + +EA + EM +P + ++ L K
Sbjct: 480 DMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENK 539
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ EAL +G+ + G P T+N ++ + + A+ EM K G +T TY
Sbjct: 540 KSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYC 599
Query: 190 IVLHHLIKAGRTEEA 204
+++ L + E+A
Sbjct: 600 VMIEGLFNCNKMEDA 614
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+I L +S E ++ M PD+ +Y ++EG + + EM + G
Sbjct: 461 MILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKG 520
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+ PD+V+Y ++ C K+ +EA+ L+ M C PS H F LI+ A
Sbjct: 521 YRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAF 580
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + + KRG + TY ++ ++ DA ++DE+ GI R +D L L
Sbjct: 581 ETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVINKGIKLPYRKFDCFLMQL 640
Query: 196 IKAGRTEEAYSVFKRMSR 213
G + + + + M +
Sbjct: 641 SMIGDLQAIHKLSEHMRK 658
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 77/174 (44%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ + ++I+ +C + VE A + ++M + + PDI +Y L+ + K
Sbjct: 485 GVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEA 544
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+Y M + G P V ++ ++I+ D A E + EM+ C +C +I G
Sbjct: 545 LGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEG 604
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L + ++ +A + +G + ++ + + +++ + MRK
Sbjct: 605 LFNCNKMEDACFLLDEVINKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHMRK 658
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 158/349 (45%), Gaps = 35/349 (10%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+P +N +I+ LCK + + E++ +MKK D+ +Y+ L+ G NL VY+
Sbjct: 255 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYK 314
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK----------------- 112
EM ++G PDVV Y M+N + A R +E +EL++ ME C+
Sbjct: 315 EMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAK 374
Query: 113 -----------------PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
+ L++GL L++AL +++ + + Y++
Sbjct: 375 VDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSS 434
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ C R+++ ++D+M K G PN + V++ ++A + E+A F M K
Sbjct: 435 MINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK- 493
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G PTV TY ++ + A + EM +G P M YS L+N LC KLD A
Sbjct: 494 GCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMA 553
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ + L+ G +P ++ + + L G E A+ L ++ + + P
Sbjct: 554 LNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 145/289 (50%), Gaps = 2/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G + + +N LI L ++ V+ A +++ + ++ D +Y +L+ G +
Sbjct: 351 MEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGY 409
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E ++ + D +Y MIN C R DE + +M CKP+PH+
Sbjct: 410 LNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNA 469
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ING +L +AL+FFG +G P TYN ++ + R ++AY ++ EM G
Sbjct: 470 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++++ L + + + A +++ + K G +P V + I++ C + +V+ A
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKMHNIIIHGLCSSGKVEDA 588
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++++ EMK R +P + ++TL+ + A K + +L G +P
Sbjct: 589 LQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQP 637
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 154/317 (48%), Gaps = 4/317 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ GL L +N LI C+ + ++A+E+ + M ++ F PD+ SY L+ +
Sbjct: 140 FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGY 199
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFC 119
+ +++ EM + G PDV Y I+I+ A E++ R ++ + P+ +
Sbjct: 200 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYN 259
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+INGL + E+ + + + KK + TY+ ++ C S ++ A R+ EM +
Sbjct: 260 VMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAEN 319
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P+ Y+ +L+ ++AGR EE ++K M K G TV +Y I++R NA+VD
Sbjct: 320 GVSPDVVVYNTMLNGYLRAGRIEECLELWKVM-EKEGCR-TVVSYNILIRGLFENAKVDE 377
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ IW+ + + Y L++ LC L+ A +E + +S++
Sbjct: 378 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 437
Query: 300 ALRDEG-MEETAVVLAQ 315
L EG ++E A VL Q
Sbjct: 438 GLCREGRLDEVAGVLDQ 454
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 144/293 (49%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ LCK+ ++ +A + ++ + R D D +Y+ ++ G ++ L + V +M
Sbjct: 397 YGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 456
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+ +IN A + ++A+ F M + C P+ + TLINGL +R S
Sbjct: 457 KHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFS 516
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + +G++P TY+ ++ C +++ A + + + G P+ + ++I++
Sbjct: 517 EAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 576
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L +G+ E+A ++ M ++ P + T+ ++ F + A +IWD + G
Sbjct: 577 HGLCSSGKVEDALQLYSEMKQRKCV-PNLVTHNTLMEGFYKVRDFERASKIWDHILQYGP 635
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + Y+ + LC ++ DA + + +D G+ P ++ L +A+ D G
Sbjct: 636 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNG 688
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 119/245 (48%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G +P + SY ++NA + ++DEA F E P+ + LI +K+ +A
Sbjct: 109 GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 168
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ ++GF P+ +Y ++ + + ++DA ++ DEM + G+ P+ Y+I++
Sbjct: 169 KELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 228
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K G A +++R+ + P P + +Y +++ C + D + IW MK
Sbjct: 229 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 288
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
++ YSTLI+ LC LD A + ++EM + G+ P +++ + G E + L
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 348
Query: 315 QKIDK 319
+ ++K
Sbjct: 349 KVMEK 353
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 1/237 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K N +I+ ++ +E A F M + P + +Y L+ G + +
Sbjct: 455 MTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 514
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EM G++P++++Y +++N C K+ D A+ L+ + KP +
Sbjct: 515 FSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 574
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL S ++ +ALQ + + K+R P T+N ++ + A ++ D + + G
Sbjct: 575 IIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG 634
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
P+ +Y+I L L R +A F + G PT T+ I+VR N +
Sbjct: 635 PQPDIISYNITLKGLCSCHRISDAVG-FLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 7/289 (2%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FGL+ L F L+ LC+ +HVE A+ +F KK F DIK+ I+L GW N+
Sbjct: 224 EFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHS-KKHEFVTDIKTSNIILNGWCVLGNVH 282
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+RE+ + EPD+ +YG +IN+ + A++LFR M I +I
Sbjct: 283 EAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCII 342
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKCG 180
+ L +KR+ EAL+ F + +RG TYN ++ C R+ +++EM RK
Sbjct: 343 DALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERKGS 402
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN+ T+ ++ L EE +F+RM R G + T Y +++R++ +
Sbjct: 403 CWPNSVTF---IYLLGSVRGPEEVPVLFQRMERS-GCKMTSDIYNLILRLYMDWDIQERV 458
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
W+EMK G+ P Y+ +I+ L + + D +YF EM GI P
Sbjct: 459 KSTWNEMKEMGLGPDRRSYTIMIHGLYEKGRTKDGLRYFNEMTLKGIMP 507
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 100/249 (40%), Gaps = 37/249 (14%)
Query: 69 REMKDDGFEPDVV-----------------------------------SYGIMINAHCSA 93
R ++ F P V +Y +++N + +A
Sbjct: 150 RGTNEEKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLNRYAAA 209
Query: 94 KRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
+ +EA+ +F + + + F +L+ L K + A F SKK F + T
Sbjct: 210 HKVEEAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLF-HSKKHEFVTDIKTS 268
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
N ++ +C +++A R E+ + P+ TY +++ L K G+ A +F+ M
Sbjct: 269 NIILNGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWE 328
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
+ G V ++ C+ ++ A+ I+ EM RG + Y+TLI LC +++
Sbjct: 329 R-GLTTDVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCKIRRME 387
Query: 274 DACKYFQEM 282
+ EM
Sbjct: 388 KVNELLNEM 396
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 101/228 (44%), Gaps = 47/228 (20%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ N +ID LC + + A E+F +M +R ++ +Y L+ K+L
Sbjct: 330 GLTTDVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLI------KHL--- 380
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME--ATNCKPSPHIFCTLI 122
C +R ++ EL EME +C P+ F L
Sbjct: 381 --------------------------CKIRRMEKVNELLNEMEERKGSCWPNSVTFIYL- 413
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC-WSM--RINDAYRMMDEMRKC 179
LGS + E F + ++ G + + YN ++ Y W + R+ + +EM++
Sbjct: 414 --LGSVRGPEEVPVLFQRMERSGCKMTSDIYNLILRLYMDWDIQERVKSTW---NEMKEM 468
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
G+GP+ R+Y I++H L + GRT++ F M+ K G P T ++V
Sbjct: 469 GLGPDRRSYTIMIHGLYEKGRTKDGLRYFNEMTLK-GIMPEPKTEKLV 515
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 74/192 (38%), Gaps = 38/192 (19%)
Query: 134 ALQFFGQSKKRG-----FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
A FF KRG F P + YN ++ R + +++ EM K N TY
Sbjct: 140 AFIFFNWVLKRGTNEEKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETY 199
Query: 189 DIVLHHLIKAGRTEEAYSVFKR---------------------------------MSRKP 215
++L+ A + EEA S+F R S+K
Sbjct: 200 SVLLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHSKKH 259
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+ T I++ +C V A R W E+ P ++ Y TLINSL + KL A
Sbjct: 260 EFVTDIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTA 319
Query: 276 CKYFQEMLDIGI 287
K F+ M + G+
Sbjct: 320 LKLFRAMWERGL 331
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 3/295 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + F+ LID LCK E+A V + + +R ++ +++ + N + +
Sbjct: 156 GCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 215
Query: 65 -NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++V + GF P V+ + ++IN C AK D A +L M C P+ F LI
Sbjct: 216 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 275
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL R+ EA Q + G P TY+ V+ C +++DAY + M + P
Sbjct: 276 GLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPP 335
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N T++I++ L KA R EEA ++ RM R+ G P + TY ++ C + QVD A ++
Sbjct: 336 NVVTHNILIDGLCKAKRIEEARQLYHRM-RETGCAPDIITYNSLIDGLCKSFQVDEAFQL 394
Query: 244 WDEMKARGVLPVMHM-YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ + GV + YSTL + ++ DAC+ F ++D G P +++L
Sbjct: 395 FQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 449
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 38/341 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI + ++ A ++ ++MK F+ + +T L++G ++ E +R M
Sbjct: 60 YGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA 119
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL---GSEK 129
D PDV++Y +++A C A ++DEA + REM A C P F TLI+GL GSE+
Sbjct: 120 KD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEE 178
Query: 130 RLSEALQ---------------------------------FFGQSKKRGFEPEAPTYNAV 156
+ L+ G +GF P +N V
Sbjct: 179 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 238
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ +C + ++ AY++++ M + G PN T+ I++ L KA R EA + ++M G
Sbjct: 239 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMG-G 297
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P V TY V+ C QVD A ++ M+ R P + ++ LI+ LC ++++A
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 357
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ + M + G P +++L L + A L Q I
Sbjct: 358 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 398
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 148/301 (49%), Gaps = 5/301 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ +I+ LCK V+ A E+F M++R P++ ++ IL++G + K +
Sbjct: 297 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 356
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI-FCTLIN 123
++Y M++ G PD+++Y +I+ C + + DEA +LF+ + + + + + TL +
Sbjct: 357 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFH 416
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G + R+++A + F +GF P+ TY +++ YC + R + +++EM G P
Sbjct: 417 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 476
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
T VL L + TE A +F M+ + T+ + Y +VV ++ D A+ +
Sbjct: 477 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDAL-IYNLVVEGMARASKHDKALAV 535
Query: 244 WDEM---KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ + R P L+ SLC K DDA + +M + G ++ L
Sbjct: 536 LEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSG 595
Query: 301 L 301
L
Sbjct: 596 L 596
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 146/310 (47%), Gaps = 1/310 (0%)
Query: 5 GLKQELPDFNRLIDTLC-KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G+ F +I LC K VE A +V + + F P + + +++ G+ + K+L S
Sbjct: 191 GMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDS 250
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ M + G P+V ++ I+I C A R EA +L +M C P+ + T+IN
Sbjct: 251 AYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVIN 310
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL + ++ +A + F ++R P T+N ++ C + RI +A ++ MR+ G P
Sbjct: 311 GLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAP 370
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ TY+ ++ L K+ + +EA+ +F+ + + TY + + ++ A RI
Sbjct: 371 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI 430
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ + +G P + Y++LI C + + + +EM G P S + L +
Sbjct: 431 FSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFE 490
Query: 304 EGMEETAVVL 313
E A+ L
Sbjct: 491 GNHTERAIQL 500
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 145/311 (46%), Gaps = 2/311 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N +D LC+ + A +F R P+ +Y IL+ G+ +L ++ EMK
Sbjct: 26 NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GFE + V + ++ C A R EA+E FR M A +C P + L++ L + E
Sbjct: 86 SGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDE 144
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + +G P+ T++ ++ C A+R+++++ + G+G + ++ ++
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQ 204
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L + E S + G PTV + +V+ FC +D A ++ + M +G +
Sbjct: 205 RLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV 264
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + ++ LI LC +++ +A + ++M+ G P +S + L +G + A L
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL 324
Query: 314 AQKIDKLRKTP 324
Q +++ R P
Sbjct: 325 FQLMER-RNCP 334
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 138/328 (42%), Gaps = 40/328 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDP-DIKSYTILLEGWGQQK 59
M + G ++ +N LID LCKS V+ A ++F + + + +Y+ L G+
Sbjct: 363 MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALG 422
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR------------------------ 95
+ ++ + D GF PD+ +Y +I +C R
Sbjct: 423 RMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLS 482
Query: 96 -----------YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ---S 141
+ A++LF M A C I+ ++ G+ + +AL Q
Sbjct: 483 AVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK 542
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+ R F P + +A+V + C + +DA +++ +M + G +Y+ +L L + R
Sbjct: 543 RDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRW 602
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
+EA VF+ M G P +ST +V+ C A+VD A + M G P + +T
Sbjct: 603 DEATQVFEAMV-SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNT 661
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRP 289
LI C + D A K +EM + G+ P
Sbjct: 662 LIGGYCKSGRADLARKLLEEMTEAGLEP 689
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 38/259 (14%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
+V S ++ C R EA+ LFR A C P+ + LI G S L A+Q
Sbjct: 21 NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80
Query: 139 GQSKKRGFE----------------------------------PEAPTYNAVVGAYCWSM 164
+ K GFE P+ TY A+V A C +
Sbjct: 81 EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAG 140
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+ ++A M+ EM G P+T T+ ++ L K G E+A+ V + + ++ G + + +
Sbjct: 141 KFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQR-GMGNSDAAF 199
Query: 225 EIVVRMFC--YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
E +++ C YN+ V++A ++ + A+G P + M++ +IN C LD A K + M
Sbjct: 200 ETIIQRLCNKYNS-VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVM 258
Query: 283 LDIGIRPPGQLFSNLKQAL 301
++ G P F+ L L
Sbjct: 259 IEKGCVPNVFTFTILITGL 277
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 4/230 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWG---Q 57
M G + + ++ L + H ERA ++FD M R D Y +++EG +
Sbjct: 469 MASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASK 528
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
L++ E + +D F P + ++ + C + D+A +L +M +
Sbjct: 529 HDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSS 588
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L++GL +R EA Q F G PE T N V+ C + +++DAY ++ M
Sbjct: 589 YNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMS 648
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
K G P+ T + ++ K+GR + A + + M+ + G EP +T++++
Sbjct: 649 KLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMT-EAGLEPNDTTHDLL 697
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 142/285 (49%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ +N LID LCK++ +++A + M + PD ++Y I++ G+ L
Sbjct: 230 GLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEA 289
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++M G +PDVV+Y ++I +C R EA +F M KP+ I+ L++G
Sbjct: 290 VRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 349
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ L + + G E +N ++ AY ++ A EMR+ G+ P+
Sbjct: 350 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 409
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y V+H L K GR E+A F +M + G P + ++ ++ C + +
Sbjct: 410 VVSYSTVIHILCKTGRVEDAVYHFNQMVSE-GLSPNIISFTSLIHGLCSIGEWKKVEELA 468
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM RG+ P +T++++LC E ++ +A +F ++ IG++P
Sbjct: 469 FEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKP 513
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 155/338 (45%), Gaps = 40/338 (11%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQE-VFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
K G + + N+LI LC + A + VF +M + + PD+ SY L++G +K
Sbjct: 119 KTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKS 178
Query: 62 LSMNEVYREMKDDG---FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
E+ M DG P+VVSY +I+ D+A LF EM P +
Sbjct: 179 QEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTY 238
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI+GL + + +A+ +G P+ TYN ++ YC ++ +A R++ +M
Sbjct: 239 NSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 298
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR--------- 229
G+ P+ TY +++ + K GR EA SVF M RK G +P + Y I++
Sbjct: 299 SGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRK-GQKPNSTIYHILLHGYATKGALI 357
Query: 230 -----------------------MFCYNAQ---VDMAMRIWDEMKARGVLPVMHMYSTLI 263
+ C A+ VD AM + EM+ G+ P + YST+I
Sbjct: 358 DVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVI 417
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ LC +++DA +F +M+ G+ P F++L L
Sbjct: 418 HILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGL 455
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 143/293 (48%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID K V++A +F +M + PD+ +Y L++G + + + + + M
Sbjct: 203 YNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMF 262
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G PD +Y IMI +CS + +EAV L ++M + +P + LI R +
Sbjct: 263 DKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCA 322
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F ++G +P + Y+ ++ Y + D ++D M + GI R ++I++
Sbjct: 323 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILI 382
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G ++A + F M R+ G P V +Y V+ + C +V+ A+ +++M + G+
Sbjct: 383 CAYAKHGAVDKAMTAFTEM-RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGL 441
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + +++LI+ LC + + EM++ GI P + + L EG
Sbjct: 442 SPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEG 494
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 173/412 (41%), Gaps = 104/412 (25%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ ++ ++ LI CK A+ VFD M ++ P+ Y ILL G+ +
Sbjct: 296 MSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGA 355
Query: 61 LLSMNEV-----------------------------------YREMKDDGFEPDVVSYGI 85
L+ + ++ + EM+ +G PDVVSY
Sbjct: 356 LIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYST 415
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS------------------ 127
+I+ C R ++AV F +M + P+ F +LI+GL S
Sbjct: 416 VIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG 475
Query: 128 -----------------EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
E R+ EA FF G +P+ +YN ++ YC+ +++++
Sbjct: 476 IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESI 535
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP--------------- 215
+ +D M G+ P++ TY+ +L+ K GR E+A ++++ M RK
Sbjct: 536 KQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGL 595
Query: 216 -------------------GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
GT+ + TY V+ C N+ VD A+R++++++++ +
Sbjct: 596 FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDV 655
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
+S +IN+L ++D+A F M+ G P +S + ++ +EG+ E
Sbjct: 656 RTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLE 707
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + N ++D LCK V AQ+ FD + PD+ SY L++G+ +
Sbjct: 475 GIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDES 534
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M G PD +Y ++N + R ++A+ L+REM + K +++G
Sbjct: 535 IKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHG 594
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ A + + + RG + TYN V+G C + +++A RM +++R +
Sbjct: 595 LFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELD 654
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
RT+ IV++ L+K GR +EA S+F M + G P V TY ++++ ++ + ++
Sbjct: 655 VRTFSIVINALLKVGRIDEAKSLFSAMVLR-GPVPDVITYSLMIKSHIEEGLLEESDNLF 713
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
M+ G HM + ++ L + + A Y ++
Sbjct: 714 LSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKI 751
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 3/222 (1%)
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
AV LF M + I LI + RL A F K G+ + T N ++
Sbjct: 75 AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134
Query: 159 AYCWSMRINDAYRMM-DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG- 216
C R +DA M+ M + G P+ +Y+ ++ L +++EA + M+ G
Sbjct: 135 GLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194
Query: 217 -TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
P V +Y V+ F +VD A ++ EM +G+ P + Y++LI+ LC +D A
Sbjct: 195 NCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKA 254
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
Q M D G+ P + ++ + + G E AV L +K+
Sbjct: 255 VAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM 296
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 97/214 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ + +N L++ K+ VE A ++ +M ++ + I+L G Q
Sbjct: 541 MVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGR 600
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ E+Y +M D G + + +Y ++ C DEA+ +F ++ + + F
Sbjct: 601 IVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSI 660
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN L R+ EA F RG P+ TY+ ++ ++ + ++ + M K G
Sbjct: 661 VINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNG 720
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ +I++ L++ G A + ++ K
Sbjct: 721 CAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEK 754
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 72/148 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + +N ++ LC++ V+ A +F+ ++ + F+ D+++++I++ + +
Sbjct: 615 GTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEA 674
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M G PDV++Y +MI +H +E+ LF ME C H+ ++
Sbjct: 675 KSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRR 734
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
L + + A + + ++ F EA T
Sbjct: 735 LLEKGDVRRAGTYLTKIDEKNFSLEAST 762
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 5/277 (1%)
Query: 21 CKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDV 80
CK VE AQ +F ++K + PD +Y IL GW + +N V EM + G PD
Sbjct: 386 CKCSLVEDAQAMFRRVKNK-VKPDANTYNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDS 444
Query: 81 VSYGIMINAHCSAKRYDEAVELFREME---ATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
+Y I++ C A EA ELF M +T P+ + +I L R E +
Sbjct: 445 FTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKL 504
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G P+ TY V+ C + ++ +AY+ ++EM G P+ TY+ L L +
Sbjct: 505 IKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCE 564
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
++EEA ++ RM + G P+V T+ +++ MF + D A W EM RG
Sbjct: 565 NKKSEEALGLYGRMI-EAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTD 623
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
Y +I L + +K++DAC E+++ GI+ P + F
Sbjct: 624 TYCVMIEGLFNCNKMEDACFLLDEVVNKGIKLPYRKF 660
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 119/246 (48%), Gaps = 5/246 (2%)
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
+P++ + ++++A C ++A +FR ++ KP + + L G + S ++
Sbjct: 372 QPEINALNLLLDALCKCSLVEDAQAMFRRVK-NKVKPDANTYNILFFGWCRVRNPSRGMR 430
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI---GPNTRTYDIVLH 193
+ + G P++ TYN + ++C + + +A + + MR G P +TY I++
Sbjct: 431 VLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMIL 490
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+++ RTEE + + K M G P VSTY+ V+ C +V+ A + +EM +G
Sbjct: 491 ALVQSDRTEECFKLIKDMINS-GVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYR 549
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y+ ++ LC K ++A + M++ G P F+ L + G + A
Sbjct: 550 PDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFET 609
Query: 314 AQKIDK 319
++DK
Sbjct: 610 WHEMDK 615
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKR---RFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+N ID+ CK+ V A E+F+ M+ + P K+Y I++ Q ++ +
Sbjct: 447 YNTAIDSFCKAGMVTEATELFEFMRTKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIK 506
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M + G PDV +Y +I C A + +EA + EM +P + ++ L K
Sbjct: 507 DMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENK 566
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ EAL +G+ + G P T+N ++ + + A+ EM K G +T TY
Sbjct: 567 KSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYC 626
Query: 190 IVLHHLIKAGRTEEA 204
+++ L + E+A
Sbjct: 627 VMIEGLFNCNKMEDA 641
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+I L +S E ++ M PD+ +Y ++EG + + EM + G
Sbjct: 488 MILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKG 547
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+ PD+V+Y ++ C K+ +EA+ L+ M C PS H F LI+ A
Sbjct: 548 YRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAF 607
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ + + KRG + TY ++ ++ DA ++DE+ GI R +D L L
Sbjct: 608 ETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVVNKGIKLPYRKFDCFLMQL 667
Query: 196 IKAGRTEEAYSVFKRMSR 213
G + + + + M +
Sbjct: 668 SMIGDLQAIHKLSEHMRK 685
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 77/174 (44%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ + ++I+ +C + VE A + ++M + + PDI +Y L+ + K
Sbjct: 512 GVLPDVSTYKQVIEGMCLAGKVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEA 571
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+Y M + G P V ++ ++I+ D A E + EM+ C +C +I G
Sbjct: 572 LGLYGRMIEAGCVPSVHTFNMLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEG 631
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L + ++ +A + +G + ++ + + +++ + MRK
Sbjct: 632 LFNCNKMEDACFLLDEVVNKGIKLPYRKFDCFLMQLSMIGDLQAIHKLSEHMRK 685
>gi|116787233|gb|ABK24422.1| unknown [Picea sitchensis]
Length = 504
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 156/319 (48%), Gaps = 12/319 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+++G +Q++ N I LC+ + V+ A E FD +K+R PD +Y +LLEGW + N
Sbjct: 172 MEQYGCRQDVVALNCYISALCRYKQVKAALEFFDSVKER-IAPDADTYALLLEGWEIEGN 230
Query: 61 LLSMNEVYREMKDD-GFEPDVVS-YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ + + EM G+ P+ S Y ++ + + DEA++ M+ C P F
Sbjct: 231 VSNARSTFGEMIARLGWMPNNTSAYNAFLSTLVNGFQVDEALKYLGVMKTKKCLPDLGFF 290
Query: 119 CTLINGLGSEKRLSEA------LQFFGQSKKRGFEPEAPTYNAVVGAYCWS--MRINDAY 170
+ L K + E + + ++ G P+ PTYN ++G C + +++N AY
Sbjct: 291 RNTLQILYQRKAMKEPYGLWQLMSLWEFMRQSGIVPDLPTYNTMIGVCCSANPIQVNSAY 350
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++DEM G P+++TY+ + I A + EEA S+F+ M++ P + Y + ++M
Sbjct: 351 SLLDEMALTGAFPDSKTYNTIFEAFITARKVEEASSIFREMTKNEFC-PLYANYVMAIKM 409
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ +MA+ +W M + + P + LI+ ++ A KY E + G++ P
Sbjct: 410 YFEADDSEMAVMMWRHMIQKAIFPKSDCAAILIDGFLDLGRVSAALKYSLEAITRGVQIP 469
Query: 291 GQLFSNLKQALRDEGMEET 309
+ LK A G ++
Sbjct: 470 VETMIKLKNASIQTGKQDA 488
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 120/300 (40%), Gaps = 49/300 (16%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
++ +L++ G K +M + + MK+ G + N + A + DEA F M
Sbjct: 114 AWNLLVDLLGSDKLFDAMWDCIKIMKNQGIVSTETLSSVFGN-YVQAGKVDEARMTFEVM 172
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
E C+ I+ L K++ AL+FF K+R P+A TY ++ + +
Sbjct: 173 EQYGCRQDVVALNCYISALCRYKQVKAALEFFDSVKER-IAPDADTYALLLEGWEIEGNV 231
Query: 167 NDAYRMMDEM-RKCGIGP-NTRTYDIVLHHLIKAGRTEEA-------------------- 204
++A EM + G P NT Y+ L L+ + +EA
Sbjct: 232 SNARSTFGEMIARLGWMPNNTSAYNAFLSTLVNGFQVDEALKYLGVMKTKKCLPDLGFFR 291
Query: 205 ---------------YSVFKRMS-----RKPGTEPTVSTYEIVVRMFCYN--AQVDMAMR 242
Y +++ MS R+ G P + TY ++ + C QV+ A
Sbjct: 292 NTLQILYQRKAMKEPYGLWQLMSLWEFMRQSGIVPDLPTYNTMIGVCCSANPIQVNSAYS 351
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ DEM G P Y+T+ + K+++A F+EM P L++N A++
Sbjct: 352 LLDEMALTGAFPDSKTYNTIFEAFITARKVEEASSIFREMTKNEFCP---LYANYVMAIK 408
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 146/306 (47%), Gaps = 4/306 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + F LI+ CK+ ++ A V M D+++Y +L+ ++ L
Sbjct: 383 GFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEA 442
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E EM +G P+VV+Y +I+ +C A+E+F+ ME C P+ + +LI G
Sbjct: 443 KETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYG 502
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +K+L +A+ + ++ G P TY ++ C ++A+R+ + M + G+ P+
Sbjct: 503 LIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 562
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ Y+++ L K+GR EEAYS R G T TY +V F D A +
Sbjct: 563 EQAYNVLTDALCKSGRAEEAYSFLVR----KGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 618
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++M G ++ YS L+ +LC + KL++A +M G++ ++ + + E
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKE 678
Query: 305 GMEETA 310
G + A
Sbjct: 679 GKHDHA 684
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 158/366 (43%), Gaps = 41/366 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ + LI LC++R V A + M ++ +YT+L++G ++
Sbjct: 240 MPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGR 299
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM G P V +Y MI+ +C + R +A+ + ME C P + +
Sbjct: 300 IHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNS 359
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM---- 176
LI GL K L EA + + RGF P T+ ++ YC + RI+DA R+ M
Sbjct: 360 LIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSN 418
Query: 177 ----------------RKC---------------GIGPNTRTYDIVLHHLIKAGRTEEAY 205
+KC G+ PN TY ++ K G A
Sbjct: 419 CKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAAL 478
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
VFK M + G P TY ++ + ++ AM + +M+ G+ P + Y+TLI
Sbjct: 479 EVFKLMEHE-GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQG 537
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQK---IDKLR 321
C + + D+A + F+ M G+ P Q ++ L AL G EE L +K + K+
Sbjct: 538 QCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVT 597
Query: 322 KTPLVD 327
T LVD
Sbjct: 598 YTSLVD 603
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 153/319 (47%), Gaps = 20/319 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL + +N L D LCKS RA+E + + ++ +YT L++G+ + N
Sbjct: 554 MEQNGLTPDEQAYNVLTDALCKS---GRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGN 610
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +M ++G + D+ +Y +++ A C K+ +EA+ + +M + K + +
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + E + A F + G +P A TY + +YC RI +A ++ EM + G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDG 730
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF----CYNA- 235
+ P+ TY+I ++ G + A+S KRM EP TY ++++ F NA
Sbjct: 731 VTPDVVTYNIFINGCGHMGYIDRAFSTLKRMV-DASCEPNCWTYWLLLKHFLKMSLINAH 789
Query: 236 -----------QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++M ++ + M G+ P + YS++I C +L++AC ML
Sbjct: 790 YVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLG 849
Query: 285 IGIRPPGQLFSNLKQALRD 303
I P ++++ L + D
Sbjct: 850 KDISPNEEIYTMLIKCCCD 868
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 153/325 (47%), Gaps = 14/325 (4%)
Query: 2 DKFGLKQELP---------DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
D GL E+P +N +ID CKS ++ A + M++ +PD +Y L+
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI 361
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
G K L E+ GF P V+++ +IN +C A+R D+A+ + M ++NCK
Sbjct: 362 YGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCK 420
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
+ LIN L + RL EA + + G P TY +++ YC + A +
Sbjct: 421 LDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEV 480
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
M G PN TY +++ LI+ + +A ++ +M ++ G P V TY +++ C
Sbjct: 481 FKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKM-QEDGITPGVITYTTLIQGQC 539
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+ D A R+++ M+ G+ P Y+ L ++LC + ++A + ++ G+
Sbjct: 540 KKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKV 596
Query: 293 LFSNLKQALRDEGMEETAVVLAQKI 317
+++L G + A VL +K+
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKM 621
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 15/308 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+D K+ + + A + +KM D+ +Y++LL+ +QK L + +M
Sbjct: 598 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMT 657
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + ++V+Y I+I+ ++D A LF EM ++ KPS + I+ R+
Sbjct: 658 VSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIE 717
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA G+ ++ G P+ TYN + I+ A+ + M PN TY ++L
Sbjct: 718 EAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLL 777
Query: 193 HHLIKAGRTEEAYS-------------VFKRMSR--KPGTEPTVSTYEIVVRMFCYNAQV 237
H +K Y V++ + R K G PTV TY ++ FC ++
Sbjct: 778 KHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRL 837
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ A + D M + + P +Y+ LI C A + +M++ G +P + + L
Sbjct: 838 EEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYL 897
Query: 298 KQALRDEG 305
L DEG
Sbjct: 898 IVGLCDEG 905
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 153/318 (48%), Gaps = 4/318 (1%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K +L + LI+ L K ++ A+E ++M P++ +YT +++G+ + + + E
Sbjct: 420 KLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALE 479
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V++ M+ +G P+ +YG +I K+ +A+ L +M+ P + TLI G
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQC 539
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ A + F ++ G P+ YN + A C S R +AY + +RK G+
Sbjct: 540 KKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--VRK-GVVLTKV 596
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ KAG T+ A + ++M + G + + TY ++++ C +++ A+ I D+
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNE-GCKADLYTYSVLLQALCKQKKLNEALSILDQ 655
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M GV + Y+ +I+ + E K D A F EM+ G +P ++ + G
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR 715
Query: 307 EETAVVLAQKIDKLRKTP 324
E A L ++++ TP
Sbjct: 716 IEEAEHLIGEMERDGVTP 733
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 2/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N +I CK + A F +++ D + LL G+ + +L
Sbjct: 174 GLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKA 233
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M G + SY I+I C A+ EA+ L M C + H + LI G
Sbjct: 234 CWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKG 293
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E R+ +A + RG P TYNA++ YC S R+ DA + M + G P+
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ L G+ +EA + + G PTV T+ ++ +C ++D A+R+
Sbjct: 354 DWTYNSLIYGLC-GGKLDEAEELLNGAIAR-GFTPTVITFTNLINGYCKAERIDDALRVK 411
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M + + Y LIN L + +L +A + EM G+ P ++++
Sbjct: 412 SNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKV 471
Query: 305 GMEETAV 311
GM A+
Sbjct: 472 GMVGAAL 478
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N + +L + E +++ + + PD +Y ++ + ++ +L + + ++
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G + D + ++ +C +A L M C+ + + + LI GL + +
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL G TY ++ C RI+DA ++DEM G+ P+ TY+ ++
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K+GR ++A + K + + G P TY ++ C ++D A + + ARG
Sbjct: 327 DGYCKSGRMKDALGI-KALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGF 384
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLD----IGIRPPGQLFSNLKQALRDEGMEE 308
P + ++ LIN C +++DDA + M+ + ++ G L + L + R + +E
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444
Query: 309 T 309
T
Sbjct: 445 T 445
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + ++ +I CK+ +E A + D M + P+ + YT+L++ K
Sbjct: 812 MMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKL 871
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+M + GF+P + SY +I C YD A LF ++
Sbjct: 872 FGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDL 917
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 152/304 (50%), Gaps = 10/304 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ----QKNLLSMNEVY 68
+N L LCK+ ++RA VF +M++ P + +Y LL G+ + ++ + + E+
Sbjct: 144 YNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMI 203
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
K PD+ SY +I+ C A++ A + R M + C P+ F TL++GL
Sbjct: 204 EGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLT 263
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+L EA F +R EP A TY ++ + ++RI+ A +M + G+ PN TY
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW-DEM 247
++ L A + E+A + KRMS G EP V TY V+ C Q++ A +++ D M
Sbjct: 324 TALIGGLCDANKVEDALEILKRMS-STGREPNVVTYTRVIGALCKGGQIERATKLFNDAM 382
Query: 248 KARGVL--PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+R P + YST+I LC + K +A +YF M++ + ++ + L E
Sbjct: 383 GSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGL--EL 440
Query: 306 MEET 309
++ET
Sbjct: 441 VQET 444
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 126/272 (46%), Gaps = 6/272 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM----KKRRFDPDIKSYTILLEGWG 56
M++ + L +N L+ C++ +E+A + ++M K PD+ SY ++ G+
Sbjct: 167 MEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFC 226
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+ + L + V R M G P+VV++ +++ C + DEA +F M NC+P+
Sbjct: 227 KARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAV 286
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ LI G R+ +A +F +RG EP TY A++G C + ++ DA ++ M
Sbjct: 287 TYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRM 346
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM--SRKPGTEPTVSTYEIVVRMFCYN 234
G PN TY V+ L K G+ E A +F SR +P Y ++ C
Sbjct: 347 SSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQ 406
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
++ A + M ++ H+Y + + L
Sbjct: 407 SKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 145/318 (45%), Gaps = 6/318 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ L K H +A+++FD M + P+I +Y I+L G + E+ ++M+
Sbjct: 40 YNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDME 99
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P ++++ C + D A EL++ + + C + L GL ++
Sbjct: 100 SKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRL-SDECSLDRISYNMLTYGLCKADQID 158
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM----RKCGIGPNTRTY 188
AL FG+ ++ P TYN ++ YC + R+ A +++EM + + P+ +Y
Sbjct: 159 RALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSY 218
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ V+ KA + A V +RM K G P V T+ ++ C ++D A +++ M
Sbjct: 219 NTVISGFCKARQLPTARYVLRRMI-KSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMV 277
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
R P Y+ LI ++D A YF +ML G+ P ++ L L D E
Sbjct: 278 ERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVE 337
Query: 309 TAVVLAQKIDKLRKTPLV 326
A+ + +++ + P V
Sbjct: 338 DALEILKRMSSTGREPNV 355
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 6/274 (2%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ LCK+ V+ A E++ ++ D SY +L G + + V+ EM++
Sbjct: 111 NMLVSCLCKNGKVDAAYELYKRLSDE-CSLDRISYNMLTYGLCKADQIDRALAVFGEMEE 169
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREM----EATNCKPSPHIFCTLINGLGSEK 129
+ P +++Y ++ +C A R ++A+ L EM + ++ P + + T+I+G +
Sbjct: 170 NAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKAR 229
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L A + K G P T+N ++ C + ++++A M + M + P TY
Sbjct: 230 QLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYT 289
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ +A R ++A F M R+ G EP V TY ++ C +V+ A+ I M +
Sbjct: 290 VLITGHARALRIDKANDYFVDMLRR-GVEPNVYTYTALIGGLCDANKVEDALEILKRMSS 348
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
G P + Y+ +I +LC +++ A K F + +
Sbjct: 349 TGREPNVVTYTRVIGALCKGGQIERATKLFNDAM 382
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 109/235 (46%), Gaps = 8/235 (3%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ + FE V +Y +NA +A ++F +M C P+ + + ++ GL + +
Sbjct: 29 RQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGIGPNTRTYDI 190
AL+ + + P N +V C + +++ AY + + +C + + +Y++
Sbjct: 89 DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSL--DRISYNM 146
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM--- 247
+ + L KA + + A +VF M P++ TY ++ +C +++ AM + +EM
Sbjct: 147 LTYGLCKADQIDRALAVFGEMEEN-AVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEG 205
Query: 248 -KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
K V+P M+ Y+T+I+ C +L A + M+ G P F+ L L
Sbjct: 206 KKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGL 260
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 2/186 (1%)
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
F +++ FE TYNA + A + A ++ D+M PN TY IVL L
Sbjct: 24 FKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLC 83
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
+T+ A + + M K T PT ++V C N +VD A ++ + L +
Sbjct: 84 DDAKTDAALELLQDMESKMLT-PTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRI 142
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
Y+ L LC D++D A F EM + + P ++ L G E A+ L ++
Sbjct: 143 S-YNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEE 201
Query: 317 IDKLRK 322
+ + +K
Sbjct: 202 MIEGKK 207
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%)
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T D V+H L + A VFK +R+ E TV TY + A +I+D+
Sbjct: 3 TEDDVIHVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDD 62
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M + LP ++ Y ++ LC + K D A + Q+M + P + + L L G
Sbjct: 63 MLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGK 122
Query: 307 EETAVVLAQKI 317
+ A L +++
Sbjct: 123 VDAAYELYKRL 133
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 147/293 (50%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +I+ V++ +F +M R PD+ +YT +++G + + V+++M
Sbjct: 206 YSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMI 265
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D+G +P++ +Y +I+ + S ++ E V + EM A KP+ + +L+N L R
Sbjct: 266 DNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCR 325
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA FF +G +P TY ++ Y +++ + +++ M GI PN ++I
Sbjct: 326 EARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFF 385
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K G ++A +F +M R+ G P +Y ++ C +VD A +++M GV
Sbjct: 386 SAYAKCGIIDKAMDIFNKM-RQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV 444
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + ++S+L+ LC DK + + F EML++GI P F+ + L EG
Sbjct: 445 TPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 497
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 144/304 (47%), Gaps = 4/304 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRF---DPDIKSYTILLEGWGQ 57
M + G + +N L+ LC + E A E+ M + P++ SY+ ++ G+
Sbjct: 156 MPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFT 215
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + ++ EM D G PDVV+Y +I+ C A+ +D A +F++M KP+
Sbjct: 216 EGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDT 275
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ LI+G S + E ++ + G +P TY +++ C + R +A D M
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMI 335
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI P+ TY I+LH G E + + M G P + I + +
Sbjct: 336 GKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN-GISPNHHIFNIFFSAYAKCGII 394
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D AM I+++M+ +G+ P Y LI++LC ++DDA F +M++ G+ P +FS+L
Sbjct: 395 DKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSL 454
Query: 298 KQAL 301
L
Sbjct: 455 VYGL 458
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 159/387 (41%), Gaps = 71/387 (18%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K + L++ LCK+ A+ FD M + P + +Y I+L G+ +
Sbjct: 299 MSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGA 358
Query: 61 LLSMNE-----------------------------------VYREMKDDGFEPDVVSYGI 85
L M++ ++ +M+ G PD VSYG
Sbjct: 359 LSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGA 418
Query: 86 MINAHCSAKRYDEA-----------------------------------VELFREMEATN 110
+I+A C R D+A ELF EM
Sbjct: 419 LIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVG 478
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
P+ F T++ L E R+ E + + G P+ +YN ++ +C + I++A
Sbjct: 479 IHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEAS 538
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++++ M G+ P++ +Y+ +LH KAGR + AYS F++M G P V TY ++
Sbjct: 539 KLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSN-GITPGVVTYNTILHG 597
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ A ++ M G ++ Y+ ++N LC + +D+A K FQ + G++
Sbjct: 598 LFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLN 657
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKI 317
F+ + AL G +E A+ L I
Sbjct: 658 IITFNIMIGALLKGGRKEDAMDLFAAI 684
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 152/345 (44%), Gaps = 37/345 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
MD+ G+ ++ + +ID LCK++ +RA+ VF +M P+I +Y L+ G
Sbjct: 230 MDR-GIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGK 288
Query: 55 ----------------------WGQQKNLLSMNEVYRE-------MKDDGFEPDVVSYGI 85
+G N L N RE M G +P V +YGI
Sbjct: 289 WKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGI 348
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
M++ + + E +L M A P+ HIF + + +A+ F + +++G
Sbjct: 349 MLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQG 408
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+A +Y A++ A C R++DA ++M G+ P+ + +++ L + E+
Sbjct: 409 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVE 468
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F M G P + + ++ C +V R+ D ++ GV P + Y+TLI+
Sbjct: 469 ELFFEM-LNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
C +D+A K + M+ +G++P ++ L G ++A
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA 572
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 129/282 (45%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + FN ++ LCK V Q + D ++ PD+ SY L++G
Sbjct: 474 MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGT 533
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ M G +PD SY +++ +C A R D A FR+M + P + T
Sbjct: 534 IDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNT 593
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++GL KR SEA + + G + + TYN ++ C S +++A +M + G
Sbjct: 594 ILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKG 653
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N T++I++ L+K GR E+A +F + G V TY +VV ++
Sbjct: 654 LQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN-GLVQNVVTYRLVVENLIEEGSLEEF 712
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++ M+ G P M + L+ L H + A Y ++
Sbjct: 713 DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL 754
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 147/338 (43%), Gaps = 21/338 (6%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL-SMNEVYREM 71
++ LI C+ H+E F + K + D LL G K + +M+ + + M
Sbjct: 97 YSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRM 156
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM---EATNCKPSPHIFCTLINGLGSE 128
+ G PD VSY I++ C+ KR +EA+EL M + +C P+ + T+ING +E
Sbjct: 157 PELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTE 216
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ + F + RG P+ TY V+ C + + A + +M G+ PN TY
Sbjct: 217 GQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTY 276
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ ++H + G+ +E + + MS G +P TY ++ C N + A +D M
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMS-AGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMI 335
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-------- 300
+G+ P + Y +++ + L + M+ GI P +F+ A
Sbjct: 336 GKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIID 395
Query: 301 --------LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
+R +G+ AV ID L K VD +
Sbjct: 396 KAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAE 433
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 149/324 (45%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LID LCK V+ A+ F++M PDI ++ L+ G
Sbjct: 404 MRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDK 463
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E++ EM + G P++V + ++ C R E L +E +P + T
Sbjct: 464 WEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNT 523
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + EA + G +P++ +YN ++ YC + RI+ AY +M G
Sbjct: 524 LIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNG 583
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY+ +LH L + R EA ++ M GT+ + TY I++ C + VD A
Sbjct: 584 ITPGVVTYNTILHGLFQTKRFSEAKELYLNMI-NSGTKWDIYTYNIILNGLCKSNCVDEA 642
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++ + ++G+ + ++ +I +L + +DA F + G+ + + +
Sbjct: 643 IKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVEN 702
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +EG E L ++K P
Sbjct: 703 LIEEGSLEEFDSLFSAMEKNGTAP 726
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 153/356 (42%), Gaps = 30/356 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K ++ +N +++ LCKS V+ A ++F + + +I ++ I++ +
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ + +G +VV+Y +++ +E LF ME P+ +
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW------------------ 162
L+ L +S A + + +R F EA T + ++ +
Sbjct: 734 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN 793
Query: 163 ----------SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
+ RI+DAY + EM G+ P+ TY+ +LH L + GR EA ++ M
Sbjct: 794 EANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 853
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
T+ + TY I++ C + VD A +++ + ++G+ + ++ +I +L +
Sbjct: 854 NSR-TQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRK 912
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVDR 328
+DA F + G+ P + + + L +EG E L ++K TPL R
Sbjct: 913 EDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEK-SGTPLDSR 967
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 125/311 (40%), Gaps = 20/311 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + +N L+ CK+ ++ A F KM P + +Y +L G Q K
Sbjct: 544 MVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKR 603
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y M + G + D+ +Y I++N C + DEA+++F+ + + + + F
Sbjct: 604 FSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNI 663
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L R +A+ F G TY VV + + + M K G
Sbjct: 664 MIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------YN 234
PN++ + ++ L+ G A + ++ + ST +++ +F +
Sbjct: 724 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER-NFSVEASTTSMLISIFSSDEYQHHA 782
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+ RI +E + ++ ++DDA F+EML G+ P +
Sbjct: 783 KSLPKKYRILNEANSSALIK-------------KARRIDDAYSLFREMLMKGLTPDVVTY 829
Query: 295 SNLKQALRDEG 305
+ + L G
Sbjct: 830 NTILHGLFQTG 840
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 9/234 (3%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P+ +Y I+I C + F + T + + L+NGL KR+ EA+
Sbjct: 92 PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151
Query: 138 FGQS-KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM-----DEMRKCGIGPNTRTYDIV 191
Q + G P+ +YN ++ C R +A ++ D++ C PN +Y V
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSC--PPNVVSYSTV 209
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ G+ ++ Y++F M + G P V TY V+ C D A ++ +M G
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDR-GIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
V P + Y+ LI+ K + + +EM G +P + +L L G
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNG 322
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/169 (18%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +++ LCKS V+ A ++F + + +I ++ I++ + +++ +
Sbjct: 864 YNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIP 923
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G PDVV+Y ++ +E LF ME + + L+ L +S
Sbjct: 924 ANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDIS 983
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYC------WSMRINDAYRMMDE 175
A + + ++ F EA T + ++ + + + + YR+++E
Sbjct: 984 RAGAYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLLNE 1032
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 154/346 (44%), Gaps = 37/346 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L++ +CKS +A +V D+M+ + P+I +Y +++ G ++ + ++ +
Sbjct: 175 YTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLS 234
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF+PD VSY ++ C+AKR+++ LF EM NC P+ F L+ +
Sbjct: 235 SYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVE 294
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A++ + + G N V+ + C R++DA+ ++ M G P+T +Y VL
Sbjct: 295 RAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVL 354
Query: 193 HHLIKAGRTEEAYSVFKRMSRK--PGTEPT------------------------------ 220
L +AGR E+A + M RK P E T
Sbjct: 355 KGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCS 414
Query: 221 --VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
+ TY +V FC +VD A+ +++ + P Y+TL+ LCH ++LD A +
Sbjct: 415 VGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAEL 471
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
EM+ F+ L +G E A+ L Q++ + TP
Sbjct: 472 LAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTP 517
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 7/307 (2%)
Query: 7 KQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+ E PD +LI LC+ A V + D+ +Y L+ G+ + L +
Sbjct: 64 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDA 123
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ M PD +Y +I C R +A+ L +M C+PS + L+
Sbjct: 124 ARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLE 180
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ +A++ + + +G P TYN ++ C R++DA ++++ + G P
Sbjct: 181 AVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQP 240
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+T +Y VL L A R E+ +F M P T++++VR FC V+ A+ +
Sbjct: 241 DTVSYTTVLKGLCAAKRWEDVEVLFCEMVEN-NCVPNEVTFDMLVRFFCRGGMVERAIEV 299
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
D M G + + +INS+C + ++DDA ++ M G P ++ + + L
Sbjct: 300 LDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCR 359
Query: 304 EGMEETA 310
G E A
Sbjct: 360 AGRWEDA 366
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 139/324 (42%), Gaps = 39/324 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ L+ C+ VERA EV D+M + + I++ +Q + E M
Sbjct: 280 FDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMG 339
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD +SY ++ C A R+++A EL EM NC P+ F T I L + +
Sbjct: 340 SYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLID 399
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ Q + G TYNA+V +C R++ A + + + PNT TY +L
Sbjct: 400 QAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLL 456
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L A R + A + M + V T+ ++V FC V+ A+ + +M G
Sbjct: 457 TGLCHAERLDAAAELLAEMMQN-DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGC 515
Query: 253 LP-----------------------VMH------------MYSTLINSLCHEDKLDDACK 277
P ++H YS++++ L ED++++A +
Sbjct: 516 TPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQ 575
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL 301
F + D+G+RP +++ + AL
Sbjct: 576 MFHAVQDMGMRPKAVMYNKILSAL 599
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 161/368 (43%), Gaps = 46/368 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------ 54
M + G N +I+++CK V+ A E + M PD SYT +L+G
Sbjct: 303 MSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGR 362
Query: 55 WGQQKNLLSMNEVYR-------------------------------EMKDDGFEPDVVSY 83
W K LL NE+ R +M + G +V+Y
Sbjct: 363 WEDAKELL--NEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTY 420
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
++N C R D A+ELF + C+P+ + TL+ GL +RL A + + +
Sbjct: 421 NALVNGFCVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQ 477
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
T+N +V +C + +A ++ +M + G PN T++ +L + + +EE
Sbjct: 478 NDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEE 537
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A + + K + T+ TY +V + +++ A++++ ++ G+ P MY+ ++
Sbjct: 538 ALELLHGLVSKGISLDTI-TYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKIL 596
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDK--L 320
++LC + D A +F M+ P + L + L EG ++E VL++ + L
Sbjct: 597 SALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656
Query: 321 RKTPLVDR 328
K+ + DR
Sbjct: 657 SKSLIEDR 664
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 4/204 (1%)
Query: 98 EAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
EA L + P ++ LI L R S+A + ++ G + YN +V
Sbjct: 53 EAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLV 112
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC R++ A R++ M + P+ TY ++ L GR +A S+ M R+
Sbjct: 113 AGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE-C 168
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+P+V TY +++ C ++ AM++ DEM+A+G P + Y+ +IN +C ED++DDA +
Sbjct: 169 QPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQ 228
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL 301
+ G +P ++ + + L
Sbjct: 229 ILNRLSSYGFQPDTVSYTTVLKGL 252
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 4/237 (1%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G PDV +I C R +A + R E + + TL+ G RL A
Sbjct: 65 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ P+A TY ++ C R+ DA ++D+M + P+ TY ++L
Sbjct: 125 RRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEA 181
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+ K+ +A V M R G P + TY +++ C +VD A +I + + + G P
Sbjct: 182 VCKSSGFGQAMKVLDEM-RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQP 240
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
Y+T++ LC + +D F EM++ P F L + GM E A+
Sbjct: 241 DTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAI 297
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 133/281 (47%), Gaps = 31/281 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M F + + FN L+DTLCK + AQ + M ++ +P+ +Y+ L+ G+ Q
Sbjct: 1 MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA--------------------- 99
+ +V+ M G PDV+SY I+IN C A+R DEA
Sbjct: 61 VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120
Query: 100 ---------VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
++LF++M A C P + ++GL + L +AL+ F + + P+
Sbjct: 121 LLGGFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDL 180
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
YN ++ A C S ++ DA + ++ G+ P+ R++ ++ L + G +EAY F++
Sbjct: 181 VIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQ 240
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
M R G P +Y ++VR F N A +++ EM RG
Sbjct: 241 MERD-GCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRG 280
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
PD ++ IL++ ++ + + + M + G EP+ V+Y ++N + R EA ++
Sbjct: 8 PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67
Query: 103 FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
F M C P + LING +R+ EA Q F + RG P TYN ++G + W
Sbjct: 68 FNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF-W 126
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
+I ++ +M G P+ TY I LH L K G ++A +F+ M P +
Sbjct: 127 KQKI----QLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNY-LNPDLV 181
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
Y I++ C + +++ A ++ ++ +G+LP + ++++I+ LC E LD+A K F++M
Sbjct: 182 IYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQM 241
Query: 283 LDIGIRP 289
G P
Sbjct: 242 ERDGCPP 248
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 122/233 (52%), Gaps = 6/233 (2%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
PD V++ I+++ C + EA + + M +P+ + +L+NG + R+ EA +
Sbjct: 8 PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F RG P+ +YN ++ C + RI++A ++ DEM G+ PNT TY+ +L
Sbjct: 68 FNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLL----- 122
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
G ++ +FK M + G P + TY I + +D A+ ++ EM+ + P +
Sbjct: 123 GGFWKQKIQLFKDMHAQ-GCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLV 181
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+Y+ LI+++C KL+DA + F ++ G+ P + ++++ L EG+ + A
Sbjct: 182 IYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEA 234
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRF------------------------- 41
+PD +N LI+ CK++ ++ A+++FD+M R
Sbjct: 77 IPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQKIQLFKDM 136
Query: 42 -----DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
PD+ +Y+I L G +Q L E++REM+++ PD+V Y I+I+A C + +
Sbjct: 137 HAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKL 196
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
++A ELF ++ P + ++I+GL E L EA + F Q ++ G P+ +YN +
Sbjct: 197 EDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVI 256
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
V + + + A ++ EM G + T + L K
Sbjct: 257 VRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSK 297
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G +L ++ + L K ++++A E+F +M+ +PD+ Y IL++ + L
Sbjct: 140 GCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDA 199
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ ++ G PDV S+ +I+ C DEA + FR+ME C P + ++ G
Sbjct: 200 RELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRG 259
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT 152
S A Q F + RGF +A T
Sbjct: 260 FLQNNGASRAEQLFQEMFDRGFSADALT 287
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ T++I++ L K G+ EA + K M K G EP TY ++ + +V A
Sbjct: 6 IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEK-GVEPNTVTYSSLMNGYLLQNRVFEA 64
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++++ M RG +P + Y+ LIN C ++D+A + F EM G+ P ++ L
Sbjct: 65 RKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTL 121
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 154/314 (49%), Gaps = 19/314 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++++I LC + VE+A +F +MK PD+ +YTIL++ + + +
Sbjct: 452 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 511
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM+ G P VV+Y +I+A+ AK+ +A ++F M C+P+ + L++G
Sbjct: 512 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 571
Query: 125 LGSEKRLSEALQ----------------FFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
L +S+A + +F + P TY A+V C + +++
Sbjct: 572 LCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDH 631
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY-EIV 227
A+ ++D M G PN YD ++ KAG+ + A VF +M+ K G P+V TY ++
Sbjct: 632 AHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT-KCGYLPSVHTYTSLI 690
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
RMF + ++D+AM++ +M P + Y+ +I+ LC + + A K M + G
Sbjct: 691 DRMF-KDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 749
Query: 288 RPPGQLFSNLKQAL 301
P ++ L L
Sbjct: 750 SPNVVTYTALIDGL 763
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 139/282 (49%), Gaps = 17/282 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ + LID+ CK+ +E+AQ +F++M+ P + +YT L+ + + K
Sbjct: 483 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 542
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN---------- 110
+ N+++ M D G P+ V+YG +++ C A +A E++ ++ T+
Sbjct: 543 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 602
Query: 111 CK------PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
C+ P+ + L++GL ++ A + G EP Y+A++ +C +
Sbjct: 603 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 662
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+I+ A + +M KCG P+ TY ++ + K GR + A V +M + T P V TY
Sbjct: 663 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCT-PNVVTY 721
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
++ C + + A+++ M+ +G P + Y+ LI+ L
Sbjct: 722 TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 153/336 (45%), Gaps = 20/336 (5%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + +F R LC ++A ++ +M ++ F PD +Y+ ++ +
Sbjct: 422 KVNVANFAR---CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 478
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++EMK G PDV +Y I+I++ C A ++A LF EM + C P+ + LI+
Sbjct: 479 LFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL 538
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM---------- 176
K++ +A F + G P TY A+V C + I+ A+ + ++
Sbjct: 539 KAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSD 598
Query: 177 ------RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ + PN TY ++ L KA + + A+ + M G EP Y+ ++
Sbjct: 599 FYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM-LSSGCEPNHIVYDALIDG 657
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
FC ++D A ++ +M G LP +H Y++LI+ + + +LD A K +ML P
Sbjct: 658 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 717
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
++ + L G E A+ L +++ +P V
Sbjct: 718 VVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNV 753
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 139/344 (40%), Gaps = 51/344 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPD---IKSYTILLEGWGQ 57
+ FG + +N L+ L + V+ V +M + F D + + L G+
Sbjct: 200 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 259
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ L M E ++D F+ D V MI+ A +DEA+ M +C P+
Sbjct: 260 WADALDMIE-----RED-FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 313
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TL++G +K+L + G P +N++V +YC AY++++ M
Sbjct: 314 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 373
Query: 178 KCGIGPNTRTYDIVLHH-----------------------------------------LI 196
CG P Y+I + L
Sbjct: 374 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 433
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
G+ ++A+ + K M RK G P STY V+ C+ +V+ A ++ EMK GV P +
Sbjct: 434 GVGKFDKAFQLIKEMMRK-GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 492
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ Y+ LI+S C ++ A F+EM +G P ++ L A
Sbjct: 493 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 536
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 145/370 (39%), Gaps = 56/370 (15%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-WGQQK----NLLSMNE- 66
FN L+ + C + A ++ ++M P Y I + GQ+K +LL + E
Sbjct: 349 FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEK 408
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+Y EM + V+ C ++D+A +L +EM P + +I L
Sbjct: 409 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 468
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A F + K G P+ TY ++ ++C + I A + +EMR G P
Sbjct: 469 HATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVV 528
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRM--------------------------------SRK 214
TY ++H +KA + +A +F RM ++
Sbjct: 529 TYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL 588
Query: 215 PGTE------------------PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
GT P V TY +V C +VD A + D M + G P
Sbjct: 589 IGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 648
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
+Y LI+ C K+D A + F +M G P +++L + +G + A+ + +
Sbjct: 649 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 708
Query: 317 IDKLRKTPLV 326
+ K TP V
Sbjct: 709 MLKDSCTPNV 718
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID CK+ ++ AQEVF +M K + P + +YT L++ + L +V +M
Sbjct: 651 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 710
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
D P+VV+Y MI+ C ++A++L ME C P+ + LI+GLG
Sbjct: 711 KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 764
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 96/255 (37%), Gaps = 34/255 (13%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G+ Y + +A R +A L RE+ + + + L+ +EA
Sbjct: 134 GYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEA 193
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L+ G+ K G+ P TYNA+V + +++ +R+ EM + G + T H
Sbjct: 194 LEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHA 253
Query: 195 LIKAGR--------------------------------TEEAYSVFKRMSRKPGTEPTVS 222
L K GR +EA S RM R P V
Sbjct: 254 LCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM-RCNSCIPNVV 312
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY ++ F Q+ RI + M G P ++++L++S C+E A K M
Sbjct: 313 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 372
Query: 283 LDIGIRPPGQLFSNL 297
G PPG + N+
Sbjct: 373 TTCGC-PPGYVVYNI 386
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 148/305 (48%), Gaps = 32/305 (10%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFE--PDVVSYG 84
E A+ VFD++ +R PD+ SY ILL G + E+ M DDG + PDVVSY
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 85 IMIN----------------------------AHCSAKRYDEAVELFREMEATNCKPSPH 116
+IN A C A+ D+A+E+ M + P
Sbjct: 93 TVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM 152
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ ++++G S + EA+ F + + G EP+ TYN+++ C + R +A ++ D M
Sbjct: 153 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
K G+ P+ TY +L G E + + M R G P + I+V + +
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILVCAYAKQEK 271
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
V+ AM ++ +M+ +G+ P Y T+I+ LC +++DA YF++M+D G+RP ++++
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 331
Query: 297 LKQAL 301
L +L
Sbjct: 332 LIHSL 336
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 141/280 (50%), Gaps = 7/280 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
+N +I LCK++ V++A EV M K PD +Y ++ G+ GQ K + +
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF---LK 175
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M+ DG EPDVV+Y +++ C R EA ++F M KP + TL+ G ++
Sbjct: 176 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKG 235
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
L E + G P ++ +V AY ++ +A + +MR+ G+ PN TY
Sbjct: 236 ALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 295
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
V+ L K+GR E+A F++M + G P Y ++ C + + A ++ EM
Sbjct: 296 TVIDVLCKSGRVEDAMLYFEQMIDE-GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLD 354
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
RG+ ++++I+S C E ++ ++ K F M+ IG++P
Sbjct: 355 RGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKP 394
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 140/273 (51%), Gaps = 1/273 (0%)
Query: 33 FDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCS 92
DKM +R P++ +Y ++ + + + EV M G PD ++Y +++ CS
Sbjct: 104 LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+ + EA+ ++M + +P + +L++ L R +EA + F KRG +P+ T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
Y ++ Y + + + ++D M + GI PN + I++ K + EEA VF +M
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM- 282
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
R+ G P TY V+ + C + +V+ AM +++M G+ P +Y++LI+SLC DK
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ A + F EMLD GI F+++ + EG
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEG 375
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIFCTLING 124
V+ E+ G PDV SY I++N C R EA+EL M + +C P + T+ING
Sbjct: 39 VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E L + L + P TYN+++ A C + ++ A ++ M K G+ P+
Sbjct: 98 FFKEGDLDKMLD-------QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++H +G+ +EA K+M R G EP V TY ++ C N + A +I+
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 209
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA---- 300
D M RG+ P + Y TL+ + L + M+ GI P +FS L A
Sbjct: 210 DSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 269
Query: 301 ------------LRDEGMEETAVVLAQKIDKLRKTPLVD 327
+R +G+ AV ID L K+ V+
Sbjct: 270 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVE 308
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 154/331 (46%), Gaps = 30/331 (9%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N L+D LCK+ A+++FD M KR PDI +Y LL+G+ + L+ M
Sbjct: 181 GVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEM 240
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G P+ + I++ A+ ++ +EA+ +F +M P+ + T+I+
Sbjct: 241 HGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDV 300
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ +A+ +F Q G P++ YN+++ + C + A + EM GI +
Sbjct: 301 LCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS 360
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM--- 241
T ++ ++ K GR E+ +F M R G +P + I + F +A+ D ++
Sbjct: 361 TIFFNSIIDSHCKEGRVIESGKLFDLMVR-IGVKPDI----ITLGRFLGSARRDYSLFVN 415
Query: 242 --RIWDEMKARG--------------------VLPVMHMYSTLINSLCHEDKLDDACKYF 279
I+ M G P + Y+ +++ LC DDA + F
Sbjct: 416 IYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMF 475
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
Q + + ++ + F+ + AL G + A
Sbjct: 476 QNLCLMDLKLEARTFNIMIDALLKVGRNDEA 506
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 27/231 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + +N LI +LC E+A+E+F +M R + +++ ++ ++
Sbjct: 321 GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIES 380
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKR-YDEAVELF-----------REME----- 107
+++ M G +PD+++ G + SA+R Y V ++ +E E
Sbjct: 381 GKLFDLMVRIGVKPDIITLGRFLG---SARRDYSLFVNIYFIFTNMSNTGDKEKETPVNT 437
Query: 108 -----ATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
A+N P + + +++GL K +AL+ F + EA T+N ++ A
Sbjct: 438 NGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDAL 497
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
R ++A + G+ PN TY ++ ++I G EE +F M
Sbjct: 498 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 548
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 85/223 (38%), Gaps = 21/223 (9%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDI-----------KSYTILLEGWGQQKNL 61
FN +ID+ CK V + ++FD M + PDI + Y++ + + N+
Sbjct: 364 FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNM 423
Query: 62 LSMNEVYREM----------KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC 111
+ + +E + P + +Y I+++ C K D+A+ +F+ + +
Sbjct: 424 SNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDL 483
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
K F +I+ L R EA F G P TY + + + +
Sbjct: 484 KLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 543
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
+ M G ++ + ++ L++ G A + + K
Sbjct: 544 LFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 586
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 148/305 (48%), Gaps = 32/305 (10%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFE--PDVVSYG 84
E A+ VFD++ +R PD+ SY ILL G + E+ M DDG + PDVVSY
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 85 IMIN----------------------------AHCSAKRYDEAVELFREMEATNCKPSPH 116
+IN A C A+ D+A+E+ M + P
Sbjct: 93 TVINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM 152
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ ++++G S + EA+ F + + G EP+ TYN+++ C + R +A ++ D M
Sbjct: 153 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
K G+ P+ TY +L G E + + M R G P + I+V + +
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN-GIHPNHYVFSILVCAYAKQEK 271
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
V+ AM ++ +M+ +G+ P Y T+I+ LC +++DA YF++M+D G+RP ++++
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 331
Query: 297 LKQAL 301
L +L
Sbjct: 332 LIHSL 336
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 141/280 (50%), Gaps = 7/280 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
+N +I LCK++ V++A EV M K PD +Y ++ G+ GQ K + +
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVF---LK 175
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M+ DG EPDVV+Y +++ C R EA ++F M KP + TL+ G ++
Sbjct: 176 KMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKG 235
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
L E + G P ++ +V AY ++ +A + +MR+ G+ PN TY
Sbjct: 236 ALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 295
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
V+ L K+GR E+A F++M + G P Y ++ C + + A ++ EM
Sbjct: 296 TVIDVLCKSGRVEDAMLYFEQMIDE-GLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLD 354
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
RG+ ++++I+S C E ++ ++ K F M+ IG++P
Sbjct: 355 RGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKP 394
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 140/273 (51%), Gaps = 1/273 (0%)
Query: 33 FDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCS 92
DKM +R P++ +Y ++ + + + EV M G PD ++Y +++ CS
Sbjct: 104 LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+ + EA+ ++M + +P + +L++ L R +EA + F KRG +P+ T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
Y ++ Y + + + ++D M + GI PN + I++ K + EEA VF +M
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM- 282
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
R+ G P TY V+ + C + +V+ AM +++M G+ P +Y++LI+SLC DK
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ A + F EMLD GI F+++ + EG
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEG 375
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIFCTLING 124
V+ E+ G PDV SY I++N C R EA+EL M + +C P + T+ING
Sbjct: 39 VFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVING 97
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E L + L + P TYN+++ A C + ++ A ++ M K G+ P+
Sbjct: 98 FFKEGDLDKMLD-------QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPD 150
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++H +G+ +EA K+M R G EP V TY ++ C N + A +I+
Sbjct: 151 CMTYNSIVHGFCSSGQPKEAIVFLKKM-RSDGVEPDVVTYNSLMDYLCKNGRCTEARKIF 209
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA---- 300
D M RG+ P + Y TL+ + L + M+ GI P +FS L A
Sbjct: 210 DSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQ 269
Query: 301 ------------LRDEGMEETAVVLAQKIDKLRKTPLVD 327
+R +G+ AV ID L K+ V+
Sbjct: 270 EKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVE 308
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 143/301 (47%), Gaps = 11/301 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N L+D LCK+ A+++FD M KR PDI +Y LL+G+ + L+ M
Sbjct: 181 GVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEM 240
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + M +G P+ + I++ A+ ++ +EA+ +F +M P+ + T+I+
Sbjct: 241 HGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDV 300
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ +A+ +F Q G P++ YN+++ + C + A + EM GI +
Sbjct: 301 LCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLS 360
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ ++ K GR E+ +F M R G +P + T + D A ++
Sbjct: 361 TIFFNSIIDSHCKEGRVIESGKLFDLMVR-IGVKPDIITL----------GRNDEAKDLF 409
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ G++P Y + ++ + L++ + F M D G + + + + L
Sbjct: 410 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 469
Query: 305 G 305
G
Sbjct: 470 G 470
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 167/349 (47%), Gaps = 37/349 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ L K R VE A +F++MK R P++ +Y IL++ ++ L + E+ +M+
Sbjct: 128 YNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRDDME 186
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V++ IMI+ C A++ +EA +F M+ C P+ F +LI+GLG R+
Sbjct: 187 RAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVD 246
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG---------- 182
+A + + G P A Y +++ ++ R D +++ EM G
Sbjct: 247 DAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYM 306
Query: 183 -------------------------PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
P+ R+Y I++H L+KAG E Y +F M ++ G
Sbjct: 307 DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM-KEQGC 365
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
Y V+ FC + +V+ A ++ +EMK +G P + Y ++I+ L D+LD+A
Sbjct: 366 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYM 425
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+E GI+ ++S+L G + A ++ +++ + TP V
Sbjct: 426 LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNV 474
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 143/297 (48%), Gaps = 1/297 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G +L N +D + K+ E+ + +F ++ F PD +SY+IL+ G +
Sbjct: 294 GCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANET 353
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ MK+ G D +Y +I+ C + + ++A +L EM+ P+ + ++I+G
Sbjct: 354 YELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDG 413
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL EA F ++K G + Y++++ + RI++AY +M+E+ + G+ PN
Sbjct: 414 LAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 473
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ +L L+KA EA F+ M + P TY I++ C + + A W
Sbjct: 474 VYTWNCLLDALVKAEEINEALICFQSM-KDLKCPPNQITYSILINGLCRVRKFNKAFVFW 532
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM+ G+ P Y+T+I+ L + +A F G P ++ + + L
Sbjct: 533 QEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGL 589
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 168/360 (46%), Gaps = 38/360 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL + N +ID LCK++ +E A +F+ M + P+ +++ L++G G+
Sbjct: 185 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 244
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +Y +M D G P + Y +I + R ++ ++++EM T C P + T
Sbjct: 245 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 304
Query: 121 -----------------------------------LINGLGSEKRLSEALQFFGQSKKRG 145
LI+GL +E + F K++G
Sbjct: 305 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 364
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+ YNAV+ +C S ++N AY++++EM+ G P TY V+ L K R +EAY
Sbjct: 365 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 424
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+F+ ++ G + V Y ++ F ++D A I +E+ +G+ P ++ ++ L+++
Sbjct: 425 MLFEE-AKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDA 483
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQL-FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L +++++A FQ M D+ PP Q+ +S L L A V Q++ KL P
Sbjct: 484 LVKAEEINEALICFQSMKDLKC-PPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKP 542
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 151/313 (48%), Gaps = 12/313 (3%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWG----------QQKNLLSMN 65
L+ KSR + A ++ M+K +F P +YTIL+ G + L
Sbjct: 16 LVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAV 75
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E++ +++ + P +Y MI + SA ++DEA L +A PS + ++ L
Sbjct: 76 ELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCL 135
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
G ++R+ EAL+ F + KR P PTYN ++ C ++N A + D+M + G+ PN
Sbjct: 136 GKKRRVEEALRIF-EEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNV 194
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T +I++ L KA + EEA S+F+ M K T P T+ ++ +VD A +++
Sbjct: 195 LTVNIMIDRLCKAQKLEEACSIFEGMDDKVCT-PNAVTFSSLIDGLGKCGRVDDAYSLYE 253
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+M G +P +Y++LI S + +D K ++EM+ G P L + + G
Sbjct: 254 KMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAG 313
Query: 306 MEETAVVLAQKID 318
E L ++I+
Sbjct: 314 ETEKGRALFREIN 326
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 5/309 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++ LI L K+ E+F MK++ D +Y +++G+ + + +
Sbjct: 331 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 390
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EMK G P VV+YG +I+ R DEA LF E ++ K + ++ +LI+G G
Sbjct: 391 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 450
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA + ++G P T+N ++ A + IN+A M+ PN
Sbjct: 451 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 510
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I+++ L + + +A+ ++ M +K G +P TY ++ + A ++
Sbjct: 511 TYSILINGLCRVRKFNKAFVFWQEM-QKLGLKPNTITYTTMISGLAKAGNILEASGLFSR 569
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEG 305
KA G +P Y+ +I L +K DA F+E G + L AL + E
Sbjct: 570 FKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAEC 629
Query: 306 MEETAVVLA 314
+E+ A+V A
Sbjct: 630 LEQAAIVGA 638
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 106/203 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + ++ LID K ++ A + +++ ++ P++ ++ LL+ + + +
Sbjct: 434 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 493
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ MKD P+ ++Y I+IN C +++++A ++EM+ KP+ + T+I+G
Sbjct: 494 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 553
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + EA F + K G P++ +YNA++ + + DAY + +E R G +
Sbjct: 554 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIH 613
Query: 185 TRTYDIVLHHLIKAGRTEEAYSV 207
T+T ++L L KA E+A V
Sbjct: 614 TKTCVVLLDALHKAECLEQAAIV 636
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 63/244 (25%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH---------- 194
GF P + +V S ++ +A+ ++ MRK P Y I++
Sbjct: 5 GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64
Query: 195 LIKAGRTEEAYSVFKRM----------------------------------SRKPGTEPT 220
L KA R +EA +F+++ + G+ P+
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V Y ++ +V+ A+RI++EMK R +P + Y+ LI+ LC E KL+ A +
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEIRD 183
Query: 281 EMLDIGIRPPGQLFSNL-------KQALRD-----EGMEE-----TAVVLAQKIDKLRKT 323
+M G+ P L N+ Q L + EGM++ AV + ID L K
Sbjct: 184 DMERAGLF-PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 242
Query: 324 PLVD 327
VD
Sbjct: 243 GRVD 246
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR------ 229
M G GP++ ++ + +K+ + EA+ + + M RK P S Y I++
Sbjct: 1 MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM-RKFKFRPAFSAYTILIGKVGLML 59
Query: 230 ----MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+ C ++D A+ ++++++ +P + Y+T+I K D+A
Sbjct: 60 LFPWVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEA 109
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 152/305 (49%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N +I + RA E+++ M + PD+ +Y IL+ G + S + EM+
Sbjct: 319 LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEME 378
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P++V+Y ++++ C +D+A + +M A + + +I LG + +L
Sbjct: 379 EKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLD 438
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA++ + K +G +P+ TYN ++ C + ++++A + + + G+ N TY+ ++
Sbjct: 439 EAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLI 498
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L+ +GR +E + M G V +Y +++ C VD +M + +EM +G+
Sbjct: 499 HALLHSGRWQEGLRLANEMVLH-GCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGI 557
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P Y+ LIN LC K+ DA + +EML+ G+ P ++ L L G A+
Sbjct: 558 KPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALN 617
Query: 313 LAQKI 317
L +K+
Sbjct: 618 LLEKL 622
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 135/321 (42%), Gaps = 31/321 (9%)
Query: 28 RAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
RA + D+M +R P +SY +L + +YR M D P ++G+
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVA 186
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
A C R +A+ L R M C P ++ T+I+ L ++ ++EA + G
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+ T+N VV C + +A R++D M G P+ TY +L L + + +EAY+
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYA 306
Query: 207 VFKR------------------------------MSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ R M G P V TY I++ C +
Sbjct: 307 MLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGR 366
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
A+R+ DEM+ +G P + YSTL++S C DDA +M G Q ++
Sbjct: 367 CGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNG 426
Query: 297 LKQALRDEGMEETAVVLAQKI 317
+ AL +G + A+ L Q++
Sbjct: 427 IIYALGKDGKLDEAMRLVQEM 447
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + ++ L+ + C++ + A+ + D+M + F + + Y ++ G+
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGK 436
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +EMK G +PD+ +Y +I C+ + DEA +F + + + T
Sbjct: 437 LDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNT 496
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R E L+ + G + +YN ++ A C ++ + +++EM G
Sbjct: 497 LIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKG 556
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN +Y+++++ L KAG+ +A + K M + G P + TY ++ C A
Sbjct: 557 IKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ-GLTPDIVTYNTLINGLCKVGWTHAA 615
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ + +++ V P + Y+ LI+ C LDDA + + GI P
Sbjct: 616 LNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVP 664
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI L S + + ++M D+ SY L++ ++ N+ + EM
Sbjct: 494 YNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMM 553
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+ SY ++IN C A + +A+EL +EM P + TLINGL
Sbjct: 554 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 613
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
AL + P+ TYN ++ +C ++DA ++D+ GI PN RT+ +++
Sbjct: 614 AALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMV 673
Query: 193 HHLIK 197
+ ++
Sbjct: 674 QNFVR 678
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 169 AYRMMDEM-RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
A ++D+M R+ + P+ R+Y+ VL L +A +A +++RM R PT T+ +
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDR-VPPTTFTFGVA 186
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
R C + A+ + M G +P +Y T+I++L + + +A EML +G
Sbjct: 187 ARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGC 246
Query: 288 RPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
F+++ L G A L ++ TP V
Sbjct: 247 AADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSV 285
>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Glycine max]
Length = 682
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 150/274 (54%), Gaps = 9/274 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + LI + KS + A EVFD+M++R +PD+ Y ++++G+ ++ + +
Sbjct: 178 GMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKA 237
Query: 65 NEVY-REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E++ R ++++ P VVSY +MI+ C R+ E +E++ M+ K + LI+
Sbjct: 238 GEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIH 297
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL L A + + + RG P+ T NA++ C + + + + + +EM KC +
Sbjct: 298 GLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSL-R 356
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N R+Y+I L L + G+ ++A ++ + E +TY +VV C+N V+ A+++
Sbjct: 357 NVRSYNIFLKGLFENGKVDDAMMLWDGL-----LEADSATYGVVVHGLCWNGYVNRALQV 411
Query: 244 WDEMKAR-GVLPVMHM-YSTLINSLCHEDKLDDA 275
+E + R G + V YS+LIN+LC E +LD+A
Sbjct: 412 LEEAEHREGGMDVDEFAYSSLINALCKEGRLDEA 445
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 12/310 (3%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N +I LCK E++++MKK D+ +Y+ L+ G + +L +VY EM
Sbjct: 256 SYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEM 315
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP--SPHIFCTLINGLGSEK 129
G PDVV+ M+N C A +E EL+ EM + + S +IF + GL
Sbjct: 316 VGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRNVRSYNIF---LKGLFENG 372
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKCGIGPNTRT 187
++ +A+ + E ++ TY VV CW+ +N A ++++E R+ G+ +
Sbjct: 373 KVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFA 428
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y +++ L K GR +EA V + M+++ G + +++ F ++++D A++++ EM
Sbjct: 429 YSSLINALCKEGRLDEADGVVELMNKR-GCKFNSHVCNVLIDGFVKHSKLDSAVKVFREM 487
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+G + Y+ LIN L ++ +A EML+ G +P +S L L + M
Sbjct: 488 SGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMM 547
Query: 308 ETAVVLAQKI 317
+ A+ L +
Sbjct: 548 DAALRLWHQF 557
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI+ LCK ++ A V + M KR + +L++G+ + L S +V+REM
Sbjct: 429 YSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMS 488
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G VVSY I+IN A+R+ EA + EM KP + TLI GL +
Sbjct: 489 GKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMD 548
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR--KCGIGPNTRTYDI 190
AL+ + Q G +P+ YN V+ C S ++ DA ++ +R KC N T++
Sbjct: 549 AALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC---VNLVTHNT 605
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ K G E A ++ + +P + +Y I ++ C +V A+ D+ R
Sbjct: 606 IMEGFYKVGNCEMASKIWAHILEDE-LQPDIISYNITLKGLCSCGRVTDAVGFLDDALVR 664
Query: 251 GVLPVMHMYSTLINSL 266
G LP ++ L+ ++
Sbjct: 665 GFLPTAITWNILVRAV 680
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 139/298 (46%), Gaps = 4/298 (1%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLS 63
L+ + + ++ LC + +V RA +V ++ + R D D +Y+ L+ ++ L
Sbjct: 385 LEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCKEGRLDE 444
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ V M G + + ++I+ + D AV++FREM C + + LIN
Sbjct: 445 ADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILIN 504
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL +R EA + ++G++P+ TY+ ++G S ++ A R+ + G P
Sbjct: 505 GLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKP 564
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ Y+IV+H L +G+ E+A ++ + +K + T+ ++ F +MA +I
Sbjct: 565 DIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV--NLVTHNTIMEGFYKVGNCEMASKI 622
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
W + + P + Y+ + LC ++ DA + + L G P ++ L +A+
Sbjct: 623 WAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAITWNILVRAV 680
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 122/275 (44%), Gaps = 3/275 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
L+ K+R A VF M P I+S+ LL + + ++ +
Sbjct: 83 LLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAA 142
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
P+V +Y +++ C +++ L M P + TLI G+ L A
Sbjct: 143 RVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFA 202
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE-MRKCGIGPNTRTYDIVLH 193
L+ F + ++RG EP+ YN ++ + A M + +R+ + P+ +Y++++
Sbjct: 203 LEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVMIS 262
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K GR E +++RM +K + + TY ++ + A ++++EM RGV
Sbjct: 263 GLCKCGRFSEGLEIWERM-KKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVR 321
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
P + + ++N LC +++ + ++EM +R
Sbjct: 322 PDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR 356
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G P + S+ ++NA + ++ A F+ EA P+ + L+ + + +
Sbjct: 108 GCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKG 167
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
G P+ TY ++G S + A + DEMR+ G+ P+ Y++++
Sbjct: 168 RGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDG 227
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K G +A +++R+ R+ P+V +Y +++ C + + IW+ MK
Sbjct: 228 FFKRGDFVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKC 287
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ YS LI+ L L A K ++EM+ G+RP + + L G E L
Sbjct: 288 DLFTYSALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELW 347
Query: 315 QKIDK 319
+++ K
Sbjct: 348 EEMGK 352
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 106/233 (45%), Gaps = 2/233 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G K N LID K ++ A +VF +M + + SY IL+ G + +
Sbjct: 452 MNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAER 511
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ EM + G++PD+++Y +I + D A+ L+ + T KP ++
Sbjct: 512 FREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNI 571
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L S ++ +ALQ + +++ T+N ++ + A ++ + +
Sbjct: 572 VIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEGFYKVGNCEMASKIWAHILEDE 630
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
+ P+ +Y+I L L GR +A F + G PT T+ I+VR +
Sbjct: 631 LQPDIISYNITLKGLCSCGRVTDAVG-FLDDALVRGFLPTAITWNILVRAVIF 682
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 152/320 (47%), Gaps = 22/320 (6%)
Query: 1 MDKFGLKQEL------PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTIL 51
+D F L QE+ P+ +N +ID+ CK +A++++ K+ DPDI +YT L
Sbjct: 206 IDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSL 265
Query: 52 LEG------WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE 105
+ G WG+ K L+ EM + P+V ++ ++I+A C + EA +F
Sbjct: 266 IRGFCRTGQWGEVKQLMC------EMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNL 319
Query: 106 MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
M +P F TLI+G + EA + F +RG P+ +Y ++ YC R
Sbjct: 320 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKR 379
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
I++A + +EMR + + Y ++ L K+GR A+ +F ++ G P V TY
Sbjct: 380 IDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINND-GPPPNVITYN 438
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
I++ FC +DM + ++ M +G+ P + Y+ LIN C ++ +A M
Sbjct: 439 ILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSK 498
Query: 286 GIRPPGQLFSNLKQALRDEG 305
+ P +++L L G
Sbjct: 499 NLAPDSITYNSLFDGLCKSG 518
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 122/255 (47%), Gaps = 1/255 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LID C+ + AQ +F+ M KR PDI ++ L+ G N+L +++ +
Sbjct: 297 FNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVF 356
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G PDV SY I+I +C KR DEAV LF EM N ++ +LI+GL R+S
Sbjct: 357 ERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRIS 416
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + F G P TYN ++ A+C I+ + M G+ P TY+I++
Sbjct: 417 YAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILI 476
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K+ R EA ++ M K P TY + C + ++ A ++ M G
Sbjct: 477 NGYCKSKRIREAMNLLSVMQSK-NLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGP 535
Query: 253 LPVMHMYSTLINSLC 267
+ Y+ L+++ C
Sbjct: 536 PVDVATYNVLLDAFC 550
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 137/278 (49%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ + LI C++ +++ +M + +P++ ++ +L++ + ++ ++
Sbjct: 254 GIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEA 313
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M G +PD+V++ +I+ HC EA +LF + P + LI G
Sbjct: 314 QGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIG 373
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
KR+ EA+ F + + + + Y++++ C S RI+ A+ + + G PN
Sbjct: 374 YCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPN 433
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I++ K + +FK M K G PTV TY I++ +C + ++ AM +
Sbjct: 434 VITYNILIDAFCKIQDIDMGIELFKLMCGK-GLTPTVLTYNILINGYCKSKRIREAMNLL 492
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
M+++ + P Y++L + LC ++ DA + F+ M
Sbjct: 493 SVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 530
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 116/232 (50%), Gaps = 1/232 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + ++ FN LI C +V A+++FD + +R PD+ SYTIL+ G+ + K
Sbjct: 320 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKR 379
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ D+V Y +I+ C + R A ELF + P+ +
Sbjct: 380 IDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNI 439
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ + + ++ F +G P TYN ++ YC S RI +A ++ M+
Sbjct: 440 LIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKN 499
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ P++ TY+ + L K+GR +A+ +FK M G V+TY +++ FC
Sbjct: 500 LAPDSITYNSLFDGLCKSGRISDAWELFKVM-HVGGPPVDVATYNVLLDAFC 550
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 140/301 (46%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + I+ C + A V + KR + P+ + T +++G +
Sbjct: 114 GVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKA 173
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + + G D V YG +IN C R +A +L +EME KP+ I+ +I+
Sbjct: 174 MDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDS 233
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ +A + + G +P+ TY +++ +C + + + ++M EM I PN
Sbjct: 234 FCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPN 293
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T+++++ + G+ EA +F M ++ G +P + T+ ++ C + V A +++
Sbjct: 294 VYTFNVLIDAFCRKGKMIEAQGMFNLMVKR-GQQPDIVTFNTLISGHCLHGNVLEARKLF 352
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D + RG+LP + Y+ LI C ++D+A F EM + L+S+L L
Sbjct: 353 DTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKS 412
Query: 305 G 305
G
Sbjct: 413 G 413
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 100/194 (51%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ + LI CK + ++ A +F++M+ + DI Y+ L++G + +
Sbjct: 359 GILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYA 418
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++ + +DG P+V++Y I+I+A C + D +ELF+ M P+ + LING
Sbjct: 419 WELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 478
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
KR+ EA+ + + P++ TYN++ C S RI+DA+ + M G +
Sbjct: 479 YCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVD 538
Query: 185 TRTYDIVLHHLIKA 198
TY+++L KA
Sbjct: 539 VATYNVLLDAFCKA 552
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 9/253 (3%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P V+ + +I + K A+ L ++M PS IN + A
Sbjct: 82 PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
G KRG++P T V+ C + + A D + G+ + Y +++ L K
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
GR+ +A+ + + M + +P + Y +++ FC + A ++ ++ G+ P +
Sbjct: 202 IGRSIDAFQLLQEMEGQV-VKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDIL 260
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
Y++LI C + + + EM++ I P F+ L A +G ++ AQ +
Sbjct: 261 TYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG----KMIEAQGM 316
Query: 318 DKLRKTPLVDRGQ 330
L +V RGQ
Sbjct: 317 FNL----MVKRGQ 325
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 1/165 (0%)
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L S + +A+ F P +N ++G+ A ++ +M G+ P+
Sbjct: 59 LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T I ++ G A+SV + K G +P T V++ C N +V AM
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLG-IVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFH 177
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D + A+G+L Y TLIN LC + DA + QEM ++P
Sbjct: 178 DNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKP 222
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 5/216 (2%)
Query: 92 SAKRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
S D+AV LF + N +P P + F T+I + K A+ Q +G P
Sbjct: 61 SFNGIDDAVTLFNHL--INMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
T + + YC + A+ ++ + K G PN T V+ L G ++A
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 178
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
++ + G Y ++ C + A ++ EM+ + V P + +Y+ +I+S C +
Sbjct: 179 NVAAQ-GMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKD 237
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ A + +++D+GI P +++L + G
Sbjct: 238 ELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTG 273
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N LI+ CKS+ + A + M+ + PD +Y L +G + +
Sbjct: 464 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDA 523
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAK 94
E+++ M G DV +Y ++++A C A+
Sbjct: 524 WELFKVMHVGGPPVDVATYNVLLDAFCKAQ 553
>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 393
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 132/259 (50%), Gaps = 1/259 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F L+D LCK V++A+ V M K+R +P+I +Y L++G+ K + +++ +
Sbjct: 126 FTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTIS 185
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+V SY +MIN C K DEA LF+EM + N P + +LI+GL +R+
Sbjct: 186 LRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIY 245
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ F G+ RG TYN+++ C + +++ A ++ +++ GI PN TY I++
Sbjct: 246 DVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILV 305
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR +A V++ + K G + Y +++ C +D A+ + +M+
Sbjct: 306 DGLCKNGRLRDAQEVYQDLLNK-GYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKC 364
Query: 253 LPVMHMYSTLINSLCHEDK 271
P Y I +L D+
Sbjct: 365 TPDGVTYEITIRALFESDR 383
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 165/358 (46%), Gaps = 55/358 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++ +K ++ +N +ID LCK + V +++ +M ++ PD+ +Y L+
Sbjct: 30 IERLLVKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSL----- 84
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+N VY +++ + YG I + EAV L +M + P+ F T
Sbjct: 85 ---LNFVYIKIRKE--------YGFSI-----LGQMKEAVGLLNQMTSKTVTPNIRTFTT 128
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL + + +A K+ EP TYN+++ Y +N A ++ + + G
Sbjct: 129 LVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRG 188
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS------------------ 222
+ PN R+Y ++++ L K +EA ++FK M K TV+
Sbjct: 189 MTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVW 248
Query: 223 ----------------TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
TY ++ C N QVD A+ + ++K +G+ P ++ Y+ L++ L
Sbjct: 249 DFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGL 308
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
C +L DA + +Q++L+ G + ++++ + L EG + A+ L K++ + TP
Sbjct: 309 CKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTP 366
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 1/289 (0%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
++ A + ++M + P+I+++T L++G + + V M EP++V+Y
Sbjct: 103 QMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYN 162
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
+++ + K ++A +LF + P+ + +INGL K + EA F + +
Sbjct: 163 SLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSK 222
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
P+ YN+++ C S RI D + + EM G N TY+ +L L K + ++A
Sbjct: 223 NMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKA 282
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
++ ++ + G P + TY I+V C N ++ A ++ ++ +G +Y+ +IN
Sbjct: 283 ITLLTKI-KNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMIN 341
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
LC E LD+A +M D P G + +AL + E +
Sbjct: 342 GLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFESDRNEILYIF 390
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 102/201 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + + +I+ LCK++ V+ A +F +M + PD +Y L++G + + + +
Sbjct: 188 GMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDV 247
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM D G ++++Y +++ C + D+A+ L +++ +P+ + + L++G
Sbjct: 248 WDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDG 307
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L RL +A + + +G++ +A Y ++ C +++A ++ +M P+
Sbjct: 308 LCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPD 367
Query: 185 TRTYDIVLHHLIKAGRTEEAY 205
TY+I + L ++ R E Y
Sbjct: 368 GVTYEITIRALFESDRNEILY 388
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 2/320 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNL 61
K G + L+ C+ ++ A +VFD M + P+ SY+IL+ G + L
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL 282
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ +M + G +P +Y ++I A C D+A LF EM A CKP+ H + L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVL 342
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL + ++ EA + K G P TYNA++ YC R+ A+ ++ M K
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN RT++ ++ L + G+ +A + KRM G P + +Y +++ C +++A
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN-GLSPDIVSYNVLIDGLCREGHMNVAY 461
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++ M + + P ++ +IN+ C + K D A + ML GI + L +
Sbjct: 462 KLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Query: 302 RDEGMEETAVVLAQKIDKLR 321
+ G A+ + + + K+R
Sbjct: 522 CNVGKTRDALFILETLVKMR 541
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 155/331 (46%), Gaps = 13/331 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + +N LI+ CK V A E+ M+KR P+++++ L+EG +
Sbjct: 362 MVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M D+G PD+VSY ++I+ C + A +L M + + +P F
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTA 481
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN + + A F G ++G + T ++ C + DA +++ + K
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMR 541
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + +++L L K + +E ++ +++ K G P+V TY +V + + +
Sbjct: 542 MLTTPHSLNVILDMLSKGCKLKEELAMLGKIN-KLGLVPSVVTYTTLVDGLIRSGDISGS 600
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R+ + MK G LP ++ Y+ +IN LC ++++A K M D G+ P ++ + +
Sbjct: 601 FRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Query: 301 LRDEGMEETAVVLAQKIDKLRKT--PLVDRG 329
+ G K+D+ +T +V+RG
Sbjct: 661 YVNNG----------KLDRALETVRAMVERG 681
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 140/313 (44%), Gaps = 10/313 (3%)
Query: 2 DKFGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ FGLK ++ + + LI LC +++A +FD+M R P++ +YT+L+
Sbjct: 284 EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLI 343
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+G + + N V R+M DG P V++Y +IN +C R A EL ME CK
Sbjct: 344 DGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ F L+ GL + +A+ + G P+ +YN ++ C +N AY++
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKL 463
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ M + P+ T+ +++ K G+ + A + M RK G T ++ C
Sbjct: 464 LTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRK-GISLDEVTGTTLIDGVC 522
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
+ A+ I + + +L H + +++ L KL + ++ +G+ P
Sbjct: 523 NVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVV 582
Query: 293 LFSNLKQALRDEG 305
++ L L G
Sbjct: 583 TYTTLVDGLIRSG 595
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ +N LID LC+ H+ A ++ M +PD ++T ++ + +Q
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M G D V+ +I+ C+ + +A+ + + +PH +++
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDM 555
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +L E L G+ K G P TY +V S I+ ++RM++ M+ G PN
Sbjct: 556 LSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPN 615
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y I+++ L + GR EEA + M + G P TY ++V+ + N ++D A+
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAM-QDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
Query: 245 DEMKARGVLPVMHMYSTLI 263
M RG +YS+L+
Sbjct: 675 RAMVERGYELNDRIYSSLL 693
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 37/239 (15%)
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
YR M+ DGF ++ Y ++NA C Y EA E+F C ++
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCK-NGYTEAAEMF--------------MCKIL----- 222
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI-GPNTR 186
K GF ++ +++ +C + + DA ++ D M + G PN+
Sbjct: 223 ---------------KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSV 267
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y I++H L + GR EEA+ + +M K G +P+ TY ++++ C +D A ++DE
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEK-GCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M ARG P +H Y+ LI+ LC + K+++A ++M+ GI P ++ L +G
Sbjct: 327 MIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDG 385
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 145/316 (45%), Gaps = 3/316 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
++ LI LC+ +E A + D+M ++ P ++YT+L++ + + ++ EM
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G +P+V +Y ++I+ C + +EA + R+M PS + LING + R+
Sbjct: 328 IARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRV 387
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A + +KR +P T+N ++ C + A ++ M G+ P+ +Y+++
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L + G AY + M+ EP T+ ++ FC + D+A M +G
Sbjct: 448 IDGLCREGHMNVAYKLLTSMN-SFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG-IRPPGQLFSNLKQALRDEGMEETA 310
+ +TLI+ +C+ K DA + ++ + + P L L + ++E
Sbjct: 507 ISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEEL 566
Query: 311 VVLAQKIDKLRKTPLV 326
+L KI+KL P V
Sbjct: 567 AMLG-KINKLGLVPSV 581
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
GF Y +V A C + A M ++ K G ++ +L + +A
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDA 249
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
VF MSR+ P +Y I++ C +++ A + D+M +G P Y+ LI
Sbjct: 250 LKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+LC +D A F EM+ G +P ++ L L +G E A + +K+ K
Sbjct: 310 ALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 95/244 (38%), Gaps = 41/244 (16%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++K GL + + L+D L +S + + + + MK P++ YTI++ G Q
Sbjct: 572 INKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGR 631
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M+D G P+ V+Y +M+ + + + D A+E R M + + I+ +
Sbjct: 632 VEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSS 691
Query: 121 LING----------------------------------------LGSEKRLSEALQFFGQ 140
L+ G L E R E+
Sbjct: 692 LLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQT 751
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
K G E + ++ +YC + ++ + K G P+ +++ +V+ L K G
Sbjct: 752 ILKSGVFLEKAI-DIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGD 810
Query: 201 TEEA 204
TE A
Sbjct: 811 TERA 814
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 150/316 (47%), Gaps = 4/316 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LC V A VFD M R P + +Y+ILL+ ++ + EM+
Sbjct: 163 YNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMR 222
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EPD+V+Y ++INA CS EA+++ + + CKP + ++ L S +R
Sbjct: 223 SKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWE 282
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + P+ T+NAV+ + C + A +++ +M + G P+ TY ++
Sbjct: 283 EADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIM 342
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTE---PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
L K R +EA + K + + ++ P T+ ++ C D A+++ DEM
Sbjct: 343 DGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSE 402
Query: 250 RGVLPVMHMYSTLINS-LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
G +P + Y+ +++ LC K ++A M+ G+ P + +L L E E
Sbjct: 403 HGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEME 462
Query: 309 TAVVLAQKIDKLRKTP 324
A+ + +++ + +P
Sbjct: 463 RAIGMFRRVQAMGLSP 478
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 8/293 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++ G + +N +++ C++ +++ A+ + D + F PD +Y L+ +
Sbjct: 119 VEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGC 175
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L V+ +M G P VV+Y I+++A C Y +AV L EM + C+P +
Sbjct: 176 VLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNV 235
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LIN + S+ + EAL+ G +P+A TY V+ + C S R +A +++ +M
Sbjct: 236 LINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND 295
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++ V+ L + G A V +MS G P + TY ++ C +VD A
Sbjct: 296 CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEH-GCTPDIITYSSIMDGLCKERRVDEA 354
Query: 241 MRIWD----EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+++ EM ++ +P ++T+I SLC + D A K EM + G P
Sbjct: 355 IKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIP 407
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 151/304 (49%), Gaps = 10/304 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ L+D CK ++A + D+M+ + +PDI +Y +L+ Q ++
Sbjct: 190 GCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEA 249
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V + G +PD V+Y ++ + CS++R++EA +L +M + +C P F +I
Sbjct: 250 LKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITS 309
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM------RK 178
L + + A + Q + G P+ TY++++ C R+++A +++ E+ +
Sbjct: 310 LCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKN 369
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF-CYNAQV 237
C P+ T++ ++ L + G + A V MS G P ++TY +V F C + +
Sbjct: 370 C--IPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEH-GCIPDITTYNCIVDGFLCKSCKT 426
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ A+ + + M + G+ P Y +L L ED+++ A F+ + +G+ P L++ +
Sbjct: 427 EEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAI 486
Query: 298 KQAL 301
L
Sbjct: 487 LLGL 490
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 5/217 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERA----QEVFDKMKKRRFDPDIKSYTILLEGWG 56
M + G ++ ++ ++D LCK R V+ A +E+ +M + PD ++ ++
Sbjct: 326 MSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLC 385
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAH-CSAKRYDEAVELFREMEATNCKPSP 115
Q+ +V EM + G PD+ +Y +++ C + + +EA++L M + P
Sbjct: 386 QKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDT 445
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ +L GL E + A+ F + + G P+ YNA++ C R + A
Sbjct: 446 TTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAY 505
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
M G P+ TY I++ + G EEA + +S
Sbjct: 506 MVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 11/186 (5%)
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
+ GL L AL+ G +P N ++ C R+ DA R+++ +
Sbjct: 68 LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVE-----AL 122
Query: 182 GPNTR--TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
GP+ TY+ +++ +AG + A +RM P TY ++R C V
Sbjct: 123 GPSATIITYNTMVNGYCRAGNIDAA----RRMIDSVPFAPDTFTYNPLIRALCVRGCVLD 178
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ ++D+M RG P + YS L+++ C E A EM G P ++ L
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238
Query: 300 ALRDEG 305
A+ +G
Sbjct: 239 AMCSQG 244
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++ A R++ + G P +I++ L GR +A V + + G T+ TY
Sbjct: 77 LDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL----GPSATIITYN 132
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
+V +C +D A R+ D + P Y+ LI +LC + DA F +ML
Sbjct: 133 TMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHR 189
Query: 286 GIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
G P +S L A E + AVVL +D++R
Sbjct: 190 GCSPSVVTYSILLDATCKESGYKQAVVL---LDEMRS 223
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 157/325 (48%), Gaps = 11/325 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-----W 55
M + G + +++ ID LC+ +V++A V ++M + P++ ++T L++G W
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
++ L + V K ++P+V +Y +MI +C + A L M P+
Sbjct: 302 MERAFRLFLKLV----KSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 357
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ + TLI+G A + + K GF P TYNA++G +C +I +AY+++
Sbjct: 358 NTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRM 417
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
G+ + TY I++ K G A +FK+M+ K P + TY ++ M+C
Sbjct: 418 ATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEK-SCHPDIHTYTTIIAMYCQQR 476
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
Q++ + +++D+ + G++P Y+++I C KL A K F+ M+ G P +
Sbjct: 477 QMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYG 536
Query: 296 NLKQALRDEG-MEETAVVLAQKIDK 319
L +L E +EE + +DK
Sbjct: 537 ALISSLCKESRLEEARALFETMLDK 561
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 146/329 (44%), Gaps = 37/329 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + F L+ C+ E A + M + F D + T+++ + +Q ++
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNV 235
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM------------------ 106
+++R M + G P++V+Y I+ C +A + EM
Sbjct: 236 TDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295
Query: 107 ------------------EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
++++ KP+ H + +I G E +L+ A G+ ++G P
Sbjct: 296 LCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TY ++ +C + A+ +M++M+ G PN TY+ ++ K G+ +EAY V
Sbjct: 356 NTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVL 415
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
RM+ G TY I++ C + A+ ++ +M + P +H Y+T+I C
Sbjct: 416 -RMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQ 474
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ +++ + + F + L IG+ P Q ++++
Sbjct: 475 QRQMEQSQQLFDKCLSIGLVPTKQTYTSM 503
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 141/315 (44%), Gaps = 4/315 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + LI CK +RA E+ +KMK F P+I +Y ++ G+ ++ +
Sbjct: 352 GLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEA 411
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V R G D V+Y I+I HC A++LF++M +C P H + T+I
Sbjct: 412 YKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAM 471
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++++ ++ Q F + G P TY +++ YC ++ A ++ + M + G P+
Sbjct: 472 YCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPD 531
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY ++ L K R EEA ++F+ M K P T + +C ++ +A+
Sbjct: 532 SITYGALISSLCKESRLEEARALFETMLDKH-LVPCDVTRVTLAYEYCRRDKITIAVSFL 590
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D + R H L+ L LD A + + +LD +++ + +
Sbjct: 591 DRLDKR---QQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYES 647
Query: 305 GMEETAVVLAQKIDK 319
A +++KI K
Sbjct: 648 NRYALASEISEKISK 662
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 10/228 (4%)
Query: 96 YDEAVELFREME--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
+ A E F M A +P F L+ G E R EA +GF ++ T
Sbjct: 160 FAHAREAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATC 219
Query: 154 NAVVGAYCWSMR---INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
VV A+C R + D +R M EM G PN Y + L + G ++A+ V +
Sbjct: 220 TVVVRAFCRQGRFRNVTDLFRRMSEM---GTPPNMVNYSAWIDGLCERGYVKQAFHVLEE 276
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLINSLCHE 269
M K G +P V T+ ++ C ++ A R++ ++ K+ P +H Y+ +I C E
Sbjct: 277 MVGK-GLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKE 335
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
KL A M++ G+ P ++ L G + A L K+
Sbjct: 336 GKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKM 383
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 18/200 (9%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN--------DAYRMMDEMRKC-- 179
RL EA + + G T N W +R+ A D M +
Sbjct: 123 RLREAADMLLELRSHGLPLVVETAN-------WVLRVGLRHPGCFAHAREAFDGMARAAG 175
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P+ R++ ++ + GR EEA ++ M + G +T +VVR FC +
Sbjct: 176 GVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQ-GFCLDSATCTVVVRAFCRQGRFRN 234
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
++ M G P M YS I+ LC + A +EM+ G++P ++L
Sbjct: 235 VTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLID 294
Query: 300 ALRDEGMEETAVVLAQKIDK 319
L G E A L K+ K
Sbjct: 295 GLCKIGWMERAFRLFLKLVK 314
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 142/285 (49%), Gaps = 5/285 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCK---SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M +G + +N LID CK + + +A V +M + P++ ++ IL++G+ +
Sbjct: 249 MKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWK 308
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
NL +V++EM D P+V++Y +IN C+ + +EA+ + +M + +P+
Sbjct: 309 DDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLIT 368
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LING + EAL F K +G P YN ++ AYC +I+D + + +EM
Sbjct: 369 YHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEME 428
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ GI P+ TY+ ++ L + G E A +F +++ K P + T+ I++ +C +
Sbjct: 429 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNK--GLPDLVTFHILMEGYCSRGES 486
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
A + EM G+ P Y+ ++ C E L A +M
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQM 531
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 155/325 (47%), Gaps = 7/325 (2%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G K L+ L K + ++ +M +R+ P++ ++ +++ + +
Sbjct: 182 YGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHC----SAKRYDEAVELFREMEATNCKPSPHIFC 119
+V +MK G+ P+VVSY +I+ +C + K Y +A + +EM P+ F
Sbjct: 242 ARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMY-KADAVLKEMVENEVSPNLTTFN 300
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI+G + L +L+ F + + P TYN+++ C +IN+A M D+M
Sbjct: 301 ILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSA 360
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PN TY +++ K G +EA +F + + GT PT Y +++ +C ++D
Sbjct: 361 GVQPNLITYHSLINGFCKNGMMKEALDMFDSV-KGQGTRPTTRMYNMLIDAYCKLGKIDD 419
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
+ +EM+ G++P + Y+ LI LC ++ A K F ++ + G+ P F L +
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILME 478
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
G A +L +++ K+ P
Sbjct: 479 GYCSRGESRKAAMLLKEMSKMGLKP 503
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 118/237 (49%), Gaps = 18/237 (7%)
Query: 85 IMINAHCSAKRYDEAVELFR-------EMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
+++ A+ + R++ E F+ ++ A +CKP L+ L + R ++
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKP-------LMVALLKQNRSADVEYL 210
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ + +R +P T+N V+ A C + ++N A +M++M+ G PN +Y+ ++ K
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCK 270
Query: 198 AGRTEEAY---SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
G + Y +V K M P ++T+ I++ F + + +++++ EM + V+P
Sbjct: 271 LGGNGKMYKADAVLKEMVENE-VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ Y++LIN LC+ K+++A +M+ G++P + +L GM + A+
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEAL 386
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 117/262 (44%), Gaps = 4/262 (1%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E ++ G++ +S ++ A R + L++EM +P+ F +IN L
Sbjct: 174 EAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINAL 233
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC---WSMRINDAYRMMDEMRKCGIG 182
++++A K G+ P +YN ++ YC + ++ A ++ EM + +
Sbjct: 234 CKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVS 293
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN T++I++ K + VFK M + P V TY ++ C +++ A+
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQD-VIPNVITYNSLINGLCNGGKINEAIG 352
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ D+M + GV P + Y +LIN C + +A F + G RP ++++ L A
Sbjct: 353 MRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYC 412
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
G + L +++++ P
Sbjct: 413 KLGKIDDGFALKEEMEREGIVP 434
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQK 59
M K GLK +N ++ CK +++ A + +M+K RR ++ SY +LL+G+ Q+
Sbjct: 496 MSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 60 NL----LSMNE---------------VYREMKDDGFEPDV 80
L + +NE V EM D GF PD+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDI 595
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 150/291 (51%), Gaps = 4/291 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + LID CK +++ A ++FD+M+K+R PD +YT ++ G + ++ ++
Sbjct: 77 VPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADK 136
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ +M G EPD V+Y +I+ +C + ++A L +M + P+ + L +GL
Sbjct: 137 VFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLC 196
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ A + + +G + TYN++V C S I A ++M+EM G+ P+T
Sbjct: 197 KLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTI 256
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T+ ++ K G +A+ + + M + G +PTV T+ +++ FC + ++ R+
Sbjct: 257 TFTTLMDAYCKTGEMVKAHELLREMLDR-GLQPTVITFNVLMNGFCMSGMLEDGERLLAW 315
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
M +G++P Y++L+ C + + + ++ M G+ P ++ L
Sbjct: 316 MLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNIL 366
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 151/312 (48%), Gaps = 2/312 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ ++ +I+ C +++ ++ +M+ + P++ +Y ++ + + V
Sbjct: 9 DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
REM + G PD V Y +I+ C A +LF EME P + +I GL
Sbjct: 69 REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ EA + F + RG EP+ TY ++ YC S + A+ + ++M + G+ PN TY
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ L K G+ + A + M K G + + TY +V C + + A+++ +EM+
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGK-GLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM-E 307
G+ P ++TL+++ C ++ A + +EMLD G++P F+ L GM E
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307
Query: 308 ETAVVLAQKIDK 319
+ +LA ++K
Sbjct: 308 DGERLLAWMLEK 319
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 141/293 (48%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK L +N +I LCKS V+ A+ V +M + PD YT L++G+ + N+ +
Sbjct: 40 GLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAA 99
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ EM+ PD ++Y +I C + EA ++F +M + +P + TLI+G
Sbjct: 100 YKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDG 159
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A Q + G P TY A+ C +++ A ++ EM G+ N
Sbjct: 160 YCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLN 219
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ L K+G +A + + M G P T+ ++ +C ++ A +
Sbjct: 220 ICTYNSLVNGLCKSGNIRQAVKLMEEM-EVAGMYPDTITFTTLMDAYCKTGEMVKAHELL 278
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
EM RG+ P + ++ L+N C L+D + ML+ GI P +++L
Sbjct: 279 REMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSL 331
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 132/270 (48%), Gaps = 1/270 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
MK R PD+ SY+ ++ G+ L + ++ +EM+ G +P++ +Y +I C + +
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
D+A + REM P ++ TLI+G + A + F + +K+ P+ Y A
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
V+ C ++ +A ++ ++M G+ P+ TY ++ K+G E+A+S+ +M +
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV-QS 179
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P V TY + C QVD A + EM +G+ + Y++L+N LC + A
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
K +EM G+ P F+ L A G
Sbjct: 240 VKLMEEMEVAGMYPDTITFTTLMDAYCKTG 269
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 146/310 (47%), Gaps = 1/310 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + + LID CKS +E+A + ++M + P++ +YT L +G + + +
Sbjct: 145 GVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTA 204
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
NE+ EM G + ++ +Y ++N C + +AV+L EME P F TL++
Sbjct: 205 NELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDA 264
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +A + + RG +P T+N ++ +C S + D R++ M + GI PN
Sbjct: 265 YCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPN 324
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T TY+ ++ ++K M + G P +TY I+++ C + A +
Sbjct: 325 TTTYNSLMKQYCIRNNMRCTTEIYKGMCAR-GVMPDSNTYNILIKGHCKARNMKEAWFLH 383
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM +G Y+++I + K+ +A + F+EM G+ ++++ E
Sbjct: 384 KEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGE 443
Query: 305 GMEETAVVLA 314
G ETA+ L
Sbjct: 444 GNMETALELC 453
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 134/284 (47%), Gaps = 1/284 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + L D LCK V+ A E+ +M + +I +Y L+ G + N
Sbjct: 176 MVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGN 235
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM+ G PD +++ +++A+C +A EL REM +P+ F
Sbjct: 236 IRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV 295
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG L + + ++G P TYN+++ YC + + M G
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARG 355
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P++ TY+I++ KA +EA+ + K M+ K G T S+Y +++ F ++ A
Sbjct: 356 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEK-GFNLTASSYNSIIKGFFKKKKISEA 414
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++EM+ G+ +Y+ ++ E ++ A + E ++
Sbjct: 415 RELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIE 458
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 1/185 (0%)
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
K RG P+ +Y+ V+ YC + +++ EM+ G+ PN TY+ ++ L K+G+
Sbjct: 2 KFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKV 61
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
++A V + M + G P Y ++ FC + A +++DEM+ + ++P Y+
Sbjct: 62 DDAERVLREMINQ-GIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
+I LC K+ +A K F +M G+ P ++ L G E A L ++ +
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 322 KTPLV 326
TP V
Sbjct: 181 LTPNV 185
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 35/177 (19%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + FN L++ C S +E + + M ++ P+ +Y L++ + + N+
Sbjct: 285 GLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCT 344
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRY---------------------------- 96
E+Y+ M G PD +Y I+I HC A+
Sbjct: 345 TEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKG 404
Query: 97 -------DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
EA ELF EM I+ ++ E + AL+ ++ + F
Sbjct: 405 FFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIENCF 461
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 163/332 (49%), Gaps = 18/332 (5%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
++ C+ V RA F + + P++ ++T ++EG ++ ++ E+ EM G
Sbjct: 243 IVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEA 134
++P+V ++ +I+ C ++A LF ++ + N KP+ + +I+G +++++ A
Sbjct: 303 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRA 362
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ K++G P TY ++ +C + AY +M+ M + G PN TY+ ++
Sbjct: 363 EMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDG 422
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K GR +EAY V K R G + TY I++ C A++ A+ ++++M G+ P
Sbjct: 423 LCKKGRVQEAYKVLKSGFRN-GLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQP 481
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS----------NLKQALR-- 302
+H Y+TLI C E ++ ++ +F+E + G+ P + ++ NL+ AL+
Sbjct: 482 DIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFF 541
Query: 303 ----DEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
D G ++ I L K +D +
Sbjct: 542 HRMSDHGCASDSITYGALISGLCKQSKLDEAR 573
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 2/286 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLS 63
G K + LID LCK E+A +F K+ + P++ +YT ++ G+ + + +
Sbjct: 302 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNR 361
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ MK+ G P+ +Y +I+ HC A ++ A EL M P+ + +++
Sbjct: 362 AEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVD 421
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL + R+ EA + + G + + TY ++ +C I A + ++M K GI P
Sbjct: 422 GLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQP 481
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ +Y ++ + R +E+ F+ R G PT TY ++ +C + +A++
Sbjct: 482 DIHSYTTLIAVFCREKRMKESEMFFEEAVR-FGLVPTNKTYTSMICGYCREGNLRLALKF 540
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ M G Y LI+ LC + KLD+A + M++ G+ P
Sbjct: 541 FHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTP 586
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 4/284 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID CK+ + ERA E+ + M + F P++ +Y +++G ++
Sbjct: 369 MKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGR 428
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V + +G + D V+Y I+I+ HC +A+ LF +M + +P H + T
Sbjct: 429 VQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTT 488
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI EKR+ E+ FF ++ + G P TY +++ YC + A + M G
Sbjct: 489 LIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG 548
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
++ TY ++ L K + +EA ++ M K G P T + +C A
Sbjct: 549 CASDSITYGALISGLCKQSKLDEARCLYDAMIEK-GLTPCEVTRVTLAYEYCKIDDGCSA 607
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
M + + ++ + + + +TL+ LC E K+ A +F ++LD
Sbjct: 608 MVVLERLEKKLWVRTV---NTLVRKLCSERKVGMAALFFHKLLD 648
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 122/270 (45%), Gaps = 4/270 (1%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + + +I C+ + RA+ + +MK++ P+ +YT L++G + N E
Sbjct: 340 KPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYE 399
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M ++GF P+V +Y +++ C R EA ++ + + LI+
Sbjct: 400 LMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHC 459
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ + +AL F + K G +P+ +Y ++ +C R+ ++ +E + G+ P +
Sbjct: 460 KQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNK 519
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ + G A F RMS ++ TY ++ C +++D A ++D
Sbjct: 520 TYTSMICGYCREGNLRLALKFFHRMSDHGCASDSI-TYGALISGLCKQSKLDEARCLYDA 578
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
M +G+ P TL C K+DD C
Sbjct: 579 MIEKGLTPCEVTRVTLAYEYC---KIDDGC 605
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 127/310 (40%), Gaps = 35/310 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL N ++ + + VE A+ +FD+M R P+ SY +++ G+ + N
Sbjct: 158 MHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGN 217
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+L + M + GF D + +++ C A+ FR FC
Sbjct: 218 VLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRR------------FCE 265
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ G P + ++ C + A+ M++EM G
Sbjct: 266 M-----------------------GLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T+ ++ L K G TE+A+ +F ++ R +P V TY ++ +C + +++ A
Sbjct: 303 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRA 362
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ MK +G+ P + Y+TLI+ C + A + M + G P ++ +
Sbjct: 363 EMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDG 422
Query: 301 LRDEGMEETA 310
L +G + A
Sbjct: 423 LCKKGRVQEA 432
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
+ FE +V ++ R+ +A M+ EM G+ P+T+T + V+ + + G E
Sbjct: 126 KNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEY 185
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A ++F M + G +P +Y ++V +C V + R M RG + S ++
Sbjct: 186 AENLFDEMCAR-GVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIV 244
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C + + A YF+ ++G+RP F+ + + L G
Sbjct: 245 REFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRG 286
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 1/197 (0%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ R+ EA++ + +G P T N VV + A + DEM G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN +Y +++ K G E+ M + G +T ++VR FC V A
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIER-GFVVDNATLSLIVREFCEKGFVTRA 256
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + G+ P + ++ +I LC + A + +EM+ G +P + L
Sbjct: 257 LWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDG 316
Query: 301 LRDEGMEETAVVLAQKI 317
L +G E A L K+
Sbjct: 317 LCKKGWTEKAFRLFLKL 333
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 154/344 (44%), Gaps = 35/344 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L +N +I+ LCK +V A+ + K+ + PD +YT ++ G ++ +L S
Sbjct: 380 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 439
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V+ +M +G EP+ V+Y +IN C + R +EA +L REM P+ H I
Sbjct: 440 LQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIA 499
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +A + F K +G EP TY A++ C S + A + M + G+ PN
Sbjct: 500 LCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSR------------------------------- 213
T TY+ +++ L++ R + A+ V M R
Sbjct: 560 TVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMN 619
Query: 214 ---KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
+ G + TY +++ +C + A+RI D M+ G P Y+ LI C
Sbjct: 620 NMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKIS 679
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAVVL 313
K++ A F EM+D G+ P ++ L +DE ++ +L
Sbjct: 680 KMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 723
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 141/293 (48%), Gaps = 9/293 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW----G 56
M + G+ +N LI+ L ++R ++ A V + M + +I +Y +++G+
Sbjct: 551 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGD 610
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+K +L MN M G ++V+Y +I +C + A+ + M CKP
Sbjct: 611 PKKAMLVMNN----MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEW 666
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ LI G ++ A F + G P TY A++ YC +++ A +++ M
Sbjct: 667 SYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 726
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
++ G PN +TY++++H L K A + K M + G P V TY ++ C N
Sbjct: 727 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE-GIFPNVVTYTAMIDGLCKNGS 785
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+A+ ++++M +G LP + YS+LI +L E K+++A F E+ G+ P
Sbjct: 786 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIP 838
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 1/274 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L +N +I C S + A + D M+ PD SYT L+ G+ +
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ S ++ EM DDG P+ V+Y +I+ +C ++ D A L M+ + C+P+ +
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 740
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + S A + + G P TY A++ C + + A M ++M + G
Sbjct: 741 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 800
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ L + G+ EEA ++F + R G P TY ++ + + +V+ A
Sbjct: 801 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERH-GLIPDEITYVKMIEAYIMSGKVEHA 859
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
M G P + Y LI L +E L D
Sbjct: 860 FNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 893
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 135/304 (44%), Gaps = 1/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + +N +I C ++A V + M +R ++ +Y +++G+ N
Sbjct: 586 MGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGN 645
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S + M+D G +PD SY +I C + + A LF EM P+ +
Sbjct: 646 TTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTA 705
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G +++L A K+ G P TYN ++ + A + M + G
Sbjct: 706 LIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEG 765
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY ++ L K G T A +F +M + G P + TY ++R +V+ A
Sbjct: 766 IFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ-GCLPNLLTYSSLIRALGQEGKVEEA 824
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ E++ G++P Y +I + K++ A + M+ G +P + L +
Sbjct: 825 ENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 884
Query: 301 LRDE 304
L++E
Sbjct: 885 LKNE 888
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 139/316 (43%), Gaps = 42/316 (13%)
Query: 4 FGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
FGL E+ D + LID CK ++ A + + MK+ P++++Y +L+ G
Sbjct: 685 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 744
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
+Q N E+ + M ++G P+VV+Y MI+ C A+E+F +M C P+
Sbjct: 745 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ +LI LG E ++ EA F + ++ G P+ TY ++ AY S ++ A+ +
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS------TYEIVV 228
M K G P TY + LIK G E +R++ P P S + V
Sbjct: 865 RMIKAGCQPTLWTYGV----LIK-GLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVS 919
Query: 229 RMFCYNAQVDMAMRI---------------WDE-------MKARGVLPVMHMYSTLINSL 266
M A++D + + W E M ++G+ P Y++L+ SL
Sbjct: 920 VMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 979
Query: 267 CHEDKLDDACKYFQEM 282
+D A F+ M
Sbjct: 980 LRVRNVDLAMGVFKHM 995
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 1/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ + GL+ L ++ L+ L + + + +M P++ Y ++ + N
Sbjct: 341 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGN 400
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +++ + PD +Y MI HC D A+++F +M C+P+ + T
Sbjct: 401 VADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYST 460
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL R++EA + G P A T + A C DA+R+ +M+ G
Sbjct: 461 LINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKG 520
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++ L +G + A +F RMSR G P TY ++ + N ++ A
Sbjct: 521 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD-GVFPNTVTYNALINILVENRRIKYA 579
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M G+ + Y+ +I C A ML G ++ + +
Sbjct: 580 FVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 639
Query: 301 LRDEGMEETAV 311
D G +A+
Sbjct: 640 YCDSGNTTSAL 650
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 7/282 (2%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LI + + R D + + + +Y+ LL + ++ + Y M +G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+P+++ Y +INA C +A + +++ + P + ++I G + L AL
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
Q F Q K G EP TY+ ++ C S R+N+A+ ++ EM GI P T + L
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
G E+A+ +F M K G EP V TY ++ C + + +A+ ++ M GV P
Sbjct: 501 CDMGCYEDAWRLFVDMKNK-GCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPN 559
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
Y+ LIN L ++ KY +L++ R LF+N+
Sbjct: 560 TVTYNALINILVENRRI----KYAFVVLNLMGR--NGLFTNI 595
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 139/324 (42%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + + LI LC S ++ A +F +M + P+ +Y L+ + +
Sbjct: 516 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V M +G ++V+Y MI +C +A+ + M + + T
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G + AL+ + G +P+ +Y ++ +C ++ A+ + +EM G
Sbjct: 636 IIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG 695
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ K + + A S+ + M R G P V TY +++ A
Sbjct: 696 LCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS-GCRPNVQTYNVLIHGLTKQNNFSGA 754
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M G+ P + Y+ +I+ LC A + F +M++ G P +S+L +A
Sbjct: 755 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 814
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L EG E A L ++++ P
Sbjct: 815 LGQEGKVEEAENLFAELERHGLIP 838
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G +P YNAV+ A C + DA +M ++ + + P+T TY ++ + + A
Sbjct: 380 GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSA 439
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
VF +M+ K G EP TY ++ C + +V+ A + EM G+LP H + I
Sbjct: 440 LQVFNQMA-KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 498
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+LC +DA + F +M + G P ++ L L G+ + A+ L ++ +
Sbjct: 499 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 553
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV---GAYCWSMRINDAY-RMMDEM 176
LI S++ ++ + F + G Y+A++ + + D Y RM+ E
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE- 379
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ PN Y+ V++ L K G +A ++ K++ P TY ++ C
Sbjct: 380 ---GVQPNLLIYNAVINALCKDGNVADAETIMKKVFESE-MSPDTFTYTSMILGHCRKHD 435
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+D A++++++M G P YSTLIN LC ++++A +EM+ GI P +
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495
Query: 297 LKQALRDEGMEETA 310
AL D G E A
Sbjct: 496 PIIALCDMGCYEDA 509
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 156/328 (47%), Gaps = 16/328 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N LID LCK+ V +F +MK + +PD+ +Y+ L+ G+ +
Sbjct: 36 MTATGCLPDINTYNTLIDGLCKTGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDR 95
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M PDVV++ ++ +C+A D+A L E+ A++C P + + +
Sbjct: 96 INMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTS 155
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G KR+ EA + + K +P Y A++ A+C + + AY++++EM G
Sbjct: 156 LVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNG 215
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ G EEA+ + +R+ R + + Y +++ C ++ A
Sbjct: 216 VQPNAITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAA 275
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + + +K G P +Y LI + L RP +++ + Q
Sbjct: 276 LELLEAIKQSGTPPRHDIYVALIRG--------------EMTLSRKGRPNAKVYEAVIQE 321
Query: 301 LRDEGMEETAVVLAQKI--DKLRKTPLV 326
L EG E A L+ ++ +K KT V
Sbjct: 322 LAREGRHEKANALSDELLGNKASKTRFV 349
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 156/326 (47%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++FGL + + LID CK +V A+ +F KM + P+ +Y++L+ G+ +Q
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGL 243
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++Y MK G P+ +Y +I+ +C+ D+A ++F EM +
Sbjct: 244 QREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNI 303
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL K+ EA++ + K G P TYN ++ +C +++ A R+ ++++ G
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSG 363
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ ++ K A + K M + P+ TY I++ F + A
Sbjct: 364 LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC-IAPSKVTYTILIDAFARLNHTEKA 422
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M+ G++P ++ YS L++ LC + +A K F+ + ++ ++P +++ +
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
EG A+ L ++ + P V
Sbjct: 483 YCKEGSSYRALRLLNEMVQSGMVPNV 508
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 143/294 (48%), Gaps = 1/294 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +N LI C V++A +VF +M+++ + +Y IL+ G + K
Sbjct: 254 MKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++ G P++V+Y I+IN C ++ D AV LF +++++ P+ + T
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNT 373
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + L+ AL + ++R P TY ++ A+ A M M K G
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSG 433
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++LH L G +EA +FK + +P Y ++ +C A
Sbjct: 434 LVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMH-LQPNSVIYNTMIHGYCKEGSSYRA 492
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+R+ +EM G++P + + + I LC ++K +A +M++ G++P L+
Sbjct: 493 LRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 37/347 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ L +S + ++A +F+++K + D S+ I+++G + + + ++
Sbjct: 127 FNNLLCLLIRSNYFDKAWWIFNELKSKVV-LDAYSFGIMIKGCCEAGYFVKGFRLLAMLE 185
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+VV Y +I+ C A LF +M P+PH + L+NG +
Sbjct: 186 EFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQR 245
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR--------------- 177
E Q + K+ G P A YN ++ YC ++ A+++ EMR
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Query: 178 --------------------KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
K G+ PN TY+I+++ + + A +F ++ + G
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQL-KSSGL 364
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
PT+ TY ++ + + A+ + EM+ R + P Y+ LI++ + + AC+
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACE 424
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
M G+ P +S L L G + A L + + ++ P
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQP 471
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
P Y+ VV AY S + A + M G P + T++ +L LI++ ++A+ +F
Sbjct: 89 TPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFN 148
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+ K + ++ I+++ C R+ ++ G+ P + +Y+TLI+ C +
Sbjct: 149 ELKSKVVLDAY--SFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKD 206
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNL-----KQALRDEGME 307
+ A F +M +G+ P +S L KQ L+ EG +
Sbjct: 207 GNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQ 249
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 151/286 (52%), Gaps = 1/286 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LID CK V +A ++F++M+ + PD+ +Y +L++G+ ++ L +++ G
Sbjct: 212 LIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG 271
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+ DV+S+ +++ + CS R+ +A++L M C PS F LIN L + L +AL
Sbjct: 272 CQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKAL 331
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
K G P + ++N ++ +C I+ A ++ M G P+ TY+I+L L
Sbjct: 332 NVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTAL 391
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G+ ++A + ++S K G P++ +Y V+ + ++A+ + +EM +G+ P
Sbjct: 392 CKDGKVDDAVVILSQLSSK-GCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 450
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+ ++++ L E K+ +A K+F + GI+P +++++ L
Sbjct: 451 LITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGL 496
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 149/317 (47%), Gaps = 4/317 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++ G + +N LI+ CKS +E A V D P+ +Y +L +
Sbjct: 130 LEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGK 186
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +V PDVV+ ++I+A C +A++LF EM CKP +
Sbjct: 187 LKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNV 246
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G E RL EA+ F + G + + ++N ++ + C R DA +++ M + G
Sbjct: 247 LIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ T++I+++ L + G +A +V + M K G P ++ +++ FC +D A
Sbjct: 307 CFPSVVTFNILINFLCQKGLLGKALNVLEMMP-KHGHTPNSRSFNPLIQGFCNRKGIDRA 365
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + M +RG P + Y+ L+ +LC + K+DDA ++ G P ++ +
Sbjct: 366 IEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDG 425
Query: 301 LRDEGMEETAVVLAQKI 317
L G E AV L +++
Sbjct: 426 LLKVGKAELAVELLEEM 442
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 122/241 (50%), Gaps = 1/241 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI+ LC+ + +A V + M K P+ +S+ L++G+ +K + E M
Sbjct: 314 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD+V+Y I++ A C + D+AV + ++ + C PS + T+I+GL +
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 433
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A++ + +G +P+ T +VVG ++++A + ++ GI PN Y+ ++
Sbjct: 434 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIM 493
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L KA +T A M G +PT ++Y +++ Y + A ++ +E+ +RG+
Sbjct: 494 MGLCKAQQTSLAIDFLVDMVAN-GCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552
Query: 253 L 253
+
Sbjct: 553 V 553
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 143/321 (44%), Gaps = 7/321 (2%)
Query: 7 KQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K ++PD LI CK + A + +++ D SY +L+ + + +
Sbjct: 98 KGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEI-- 155
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
E R + P+ +Y ++ + C + +A+++ + C P LI+
Sbjct: 156 -EEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLID 214
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
E + +A++ F + + +G +P+ TYN ++ +C R+++A + ++ G
Sbjct: 215 ATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQS 274
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ +++++L L GR +A + M RK G P+V T+ I++ C + A+ +
Sbjct: 275 DVISHNMILRSLCSGGRWMDAMKLLATMLRK-GCFPSVVTFNILINFLCQKGLLGKALNV 333
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ M G P ++ LI C+ +D A ++ + M+ G P ++ L AL
Sbjct: 334 LEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCK 393
Query: 304 EGMEETAVVLAQKIDKLRKTP 324
+G + AVV+ ++ +P
Sbjct: 394 DGKVDDAVVILSQLSSKGCSP 414
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +G + ++ N ++ +LC A ++ M ++ P + ++ IL+ Q+
Sbjct: 267 LPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGL 326
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V M G P+ S+ +I C+ K D A+E M + C P +
Sbjct: 327 LGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNI 386
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L + ++ +A+ Q +G P +YN V+ + A +++EM G
Sbjct: 387 LLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKG 446
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T V+ L + G+ EA F + + G +P Y ++ C Q +A
Sbjct: 447 LKPDLITCTSVVGGLSREGKVHEAIKFFHYL-KGFGIKPNAFIYNSIMMGLCKAQQTSLA 505
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +M A G P Y+TLI + +E ++A K E+ G+
Sbjct: 506 IDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGL 552
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 10/203 (4%)
Query: 116 HIFCTLI-NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
H C LI NG L E +F +G P+ A++ +C R +A R+M
Sbjct: 74 HHLCRLIRNG-----ELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMG 128
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
+ + G + +Y+++++ K+G EEA V S P +TY+ V+ C
Sbjct: 129 ILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTS----VAPNAATYDAVLCSLCDR 184
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
++ AM++ D P + + LI++ C E + A K F EM G +P +
Sbjct: 185 GKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTY 244
Query: 295 SNLKQALRDEGMEETAVVLAQKI 317
+ L + EG + A++ +K+
Sbjct: 245 NVLIKGFCKEGRLDEAIIFLKKL 267
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 148/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ L +N +I L KS VE AQ F +M+ PD+ +Y +L G+ + N
Sbjct: 340 MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGN 399
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +++ G P V++Y +I+ +C +EA L EM C P +
Sbjct: 400 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTI 459
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NG + L A +FF + +G +P+ YN + A + A+++ + M G
Sbjct: 460 LMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKG 519
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+T TY++++ L K G ++A + +M G +P TY ++ C + A
Sbjct: 520 IYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSD-GLQPDCITYTCLIHAHCERGLLSEA 578
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + M + G+ P + Y+ LI++ C L A +F++MLD+GI P ++ L A
Sbjct: 579 RKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHA 638
Query: 301 LRDEG 305
L G
Sbjct: 639 LCRTG 643
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ + GL + +N LID C+ +E A+ + ++M ++ PD+ +YTIL+ G + +N
Sbjct: 410 LRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRN 469
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E + EM G +PD +Y I A +A +L M P +
Sbjct: 470 LPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNV 529
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL L +A + G +P+ TY ++ A+C +++A ++++ M G
Sbjct: 530 IIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDG 589
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I++H + G AY F++M G EP TY +++ C + +A
Sbjct: 590 LQPSVVTYTILIHTCCRRGNLYSAYGWFRKM-LDVGIEPNEITYNVLIHALCRTGRTLLA 648
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ EM RG+ P + Y+ LI+ C E DA + + EM GI P
Sbjct: 649 YHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 697
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 138/305 (45%), Gaps = 16/305 (5%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRR------FDPDIKSYTILLE-GWGQQKNLLSMN 65
+N +I L + H+E A ++ D M+ + ++P I T LLE G+ Q+ L M
Sbjct: 283 YNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLI---TALLERGFVQKVEALQM- 338
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
EM+++G P +V+Y +I+ +++ + A F EM A P + +++NG
Sbjct: 339 ----EMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGY 394
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
L EAL G ++ G P TYN ++ YC + +A R+ +EM + G P+
Sbjct: 395 CKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDV 454
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY I+++ K A F M K G +P Y + A ++ +
Sbjct: 455 CTYTILMNGSHKVRNLPMAREFFDEMLSK-GLQPDCFAYNTRICAELILGDTHKAFQLRE 513
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M +G+ P Y+ +I+ LC L DA +M+ G++P ++ L A + G
Sbjct: 514 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERG 573
Query: 306 MEETA 310
+ A
Sbjct: 574 LLSEA 578
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 1/206 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
+A ++ + M + PD +Y ++++G + NL ++ +M DG +PD ++Y
Sbjct: 505 THKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTC 564
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+AHC EA +L M + +PS + LI+ L A +F + G
Sbjct: 565 LIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVG 624
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
EP TYN ++ A C + R AY EM + G+ PN TY +++ + G +A
Sbjct: 625 IEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAI 684
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMF 231
++ M + G P T+ + + F
Sbjct: 685 RLYFEMHQN-GIPPDYCTHNALFKGF 709
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 121/283 (42%), Gaps = 37/283 (13%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
PD++ +L + VYREM EP +V+Y ++++ R DEA L
Sbjct: 206 PDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASML 265
Query: 103 FREME--ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ---SKK-------------- 143
+EME C + + +I+ L E L A + SKK
Sbjct: 266 LKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLITALL 325
Query: 144 -RGFE----------------PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RGF P TYNA++ S ++ A EMR G+ P+
Sbjct: 326 ERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLI 385
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ +L+ KAG +EA + + R+ G PTV TY ++ +C ++ A R+ +E
Sbjct: 386 TYNSMLNGYCKAGNLKEALWLLGDL-RRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEE 444
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M +G P + Y+ L+N L A ++F EML G++P
Sbjct: 445 MVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQP 487
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 3/190 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
LK PD +N +ID LCK+ +++ A+++ KM PD +YT L+ ++ L
Sbjct: 517 LKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLS 576
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ M DG +P VV+Y I+I+ C A FR+M +P+ + LI
Sbjct: 577 EARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLI 636
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L R A F + +RG P TY ++ C DA R+ EM + GI
Sbjct: 637 HALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIP 696
Query: 183 PNTRTYDIVL 192
P+ T++ +
Sbjct: 697 PDYCTHNALF 706
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + + LI C+ + A+++ + M P + +YTIL+ ++ NL S
Sbjct: 554 GLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSA 613
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+R+M D G EP+ ++Y ++I+A C R A F EM P+ + + LI+G
Sbjct: 614 YGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDG 673
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
E ++A++ + + + G P+ T+NA+ +
Sbjct: 674 NCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 112/246 (45%), Gaps = 5/246 (2%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+R + G PDV ++ A R+D+ ++REM +P+ + TL++
Sbjct: 195 AFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFL 254
Query: 127 SEKRLSEALQFFG--QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E R EA +++ G TYN V+ + +A +++D MR +
Sbjct: 255 KEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSKKAS 313
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ TY+ ++ L++ G ++ ++ M + G PT+ TY ++ + QV+ A +
Sbjct: 314 SFTYNPLITALLERGFVQKVEALQMEMENE-GIMPTLVTYNAIIHGLLKSEQVEAAQLKF 372
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRD 303
EM+A G+LP + Y++++N C L +A ++ G+ P ++ L R
Sbjct: 373 AEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRL 432
Query: 304 EGMEET 309
G+EE
Sbjct: 433 GGLEEA 438
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ +N LI LC++ A F +M +R P+ +YT+L++G ++ N
Sbjct: 620 MLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGN 679
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMI 87
+Y EM +G PD ++ +
Sbjct: 680 WADAIRLYFEMHQNGIPPDYCTHNALF 706
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 145/286 (50%), Gaps = 1/286 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + +N +I+ LCK+ RA+ V D+M K PD +Y ILL + N
Sbjct: 419 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 478
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++ EM G PD+VS+ +I D+A++ FR+M+ P I+
Sbjct: 479 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 538
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G +SEAL+ + ++G + TYN ++ C +++A + EM + G
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ +++ K G +A ++F+ M ++ +P V TY ++ FC ++++
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKV 657
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+W++M +R + P Y LIN C+ + +A + + EM++ G
Sbjct: 658 NELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 146/309 (47%), Gaps = 1/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + N L+ L K V+ A E++ ++ + ++ + I++ + + + +
Sbjct: 318 GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT 377
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+M++ G PDVV+Y +INA+C +EA EL M KP + +ING
Sbjct: 378 KSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIING 437
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + A + K G P+ TYN ++ C + + DA R+ DEM G+ P+
Sbjct: 438 LCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPD 497
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++ ++ L K G ++A F+ M + G P Y I++ FC N + A+++
Sbjct: 498 LVSFSALIGLLSKNGCLDQALKYFRDM-KNAGLAPDNVIYTILIGGFCRNGVMSEALKVR 556
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
DEM +G + Y+T++N LC E L +A + F EM + G+ P F+ L +
Sbjct: 557 DEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKD 616
Query: 305 GMEETAVVL 313
G AV L
Sbjct: 617 GNMNKAVTL 625
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 151/316 (47%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +L F+ LI L K+ +++A + F MK PD YTIL+ G+ + +
Sbjct: 493 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 552
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V EM + G DVV+Y ++N C K EA ELF EM P + F TLING
Sbjct: 553 LKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 612
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +++A+ F +R +P+ TYN ++ +C + + ++M I PN
Sbjct: 613 YXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 672
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y I+++ G EA+ ++ M K G E T+ T +V+ +C A
Sbjct: 673 HISYGILINGYCNMGCVSEAFRLWDEMVEK-GFEATIITCNTIVKGYCRAGNAVKADEFL 731
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M +G++P Y+TLIN E+ +D A +M + G+ P ++ + +
Sbjct: 732 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQ 791
Query: 305 G-MEETAVVLAQKIDK 319
G M+E +++ + I++
Sbjct: 792 GRMQEAELIMLKMIER 807
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 140/285 (49%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +++ LCK + + A E+F +M +R PD ++T L+ G+ + N+
Sbjct: 563 GCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKA 622
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M +PDVV+Y +I+ C ++ EL+ +M + P+ + LING
Sbjct: 623 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 682
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ +SEA + + + ++GFE T N +V YC + A + M GI P+
Sbjct: 683 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 742
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ IK + A+++ +M G P V TY +++ F ++ A I
Sbjct: 743 GITYNTLINGFIKEENMDRAFALVNKM-ENSGLLPDVITYNVILNGFSRQGRMQEAELIM 801
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M RGV P Y++LIN ++ L +A + EML G P
Sbjct: 802 LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 18/323 (5%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIK-----------------SY 48
K L F+ +I L +SR + AQ V +M ++ ++ +
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291
Query: 49 TILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA 108
+L+ + Q + L E +R +K G + + ++ D A E+++E+
Sbjct: 292 DLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVR 351
Query: 109 TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
+ + + + +IN L +++ F +++G P+ TYN ++ AYC + +
Sbjct: 352 SGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEE 411
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A+ +MD M G+ P TY+ +++ L K G+ A V M K G P +TY I++
Sbjct: 412 AFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEM-LKIGMSPDTATYNILL 470
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C N + A RI+DEM ++GV+P + +S LI L LD A KYF++M + G+
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 530
Query: 289 PPGQLFSNLKQALRDEGMEETAV 311
P +++ L G+ A+
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEAL 553
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 137/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G+ ++ +N LI+ C+ +E A E+ D M + P + +Y ++ G +
Sbjct: 384 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 443
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V EM G PD +Y I++ C +A +F EM + P F
Sbjct: 444 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 503
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L L +AL++F K G P+ Y ++G +C + +++A ++ DEM + G
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY+ +L+ L K EA +F M+ + G P T+ ++ + + ++ A
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTER-GVFPDFYTFTTLINGYXKDGNMNKA 622
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +++ M R + P + Y+TLI+ C +++ + + +M+ I P
Sbjct: 623 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 671
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 35/216 (16%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
LK ++ +N LID CK +E+ E+++ M RR P+ SY IL+ G+ +
Sbjct: 634 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 693
Query: 66 EVYREMKDDGFE-----------------------------------PDVVSYGIMINAH 90
++ EM + GFE PD ++Y +IN
Sbjct: 694 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 753
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
+ D A L +ME + P + ++NG + R+ EA + +RG P+
Sbjct: 754 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 813
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
TY +++ + + +A+R+ DEM + G P+ +
Sbjct: 814 STYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 70/145 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + N ++ C++ + +A E M + PD +Y L+ G+ +++N+
Sbjct: 703 GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRA 762
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M++ G PDV++Y +++N R EA + +M P + +LING
Sbjct: 763 FALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLING 822
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPE 149
++ L EA + + +RGF P+
Sbjct: 823 HVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 85/198 (42%), Gaps = 18/198 (9%)
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKCGI----------------GPNTRTY 188
F+ +++A++ S R+ DA ++ M RK G+ G N +
Sbjct: 232 FKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVF 291
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
D+++ ++A + E F+ + K G +++ ++ VD+A I+ E+
Sbjct: 292 DLLVRTYVQARKLREGCEAFRVLKSK-GLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
GV ++ + +IN+LC K+++ + +M + G+ P ++ L A +G+ E
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410
Query: 309 TAVVLAQKIDKLRKTPLV 326
A L + P V
Sbjct: 411 EAFELMDSMSGKGLKPCV 428
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL ++ +N +++ + ++ A+ + KM +R +PD +YT L+ G Q N
Sbjct: 769 MENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNN 828
Query: 61 LLSMNEVYREMKDDGFEPD 79
L V+ EM GF PD
Sbjct: 829 LKEAFRVHDEMLQRGFVPD 847
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 152/304 (50%), Gaps = 10/304 (3%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ----QKNLLSMNEVY 68
+N L LCK+ ++RA VF +M++ P + +Y LL G+ + ++ + + E+
Sbjct: 144 YNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMI 203
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
K PD+ SY +I+ C A++ A + R M + C P+ F TL++GL
Sbjct: 204 EGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLT 263
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+L EA F +R EP A TY ++ + ++RI+ A +M + G+ PN TY
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW-DEM 247
++ L A + E+A + KRMS G EP V TY V+ C Q++ A +++ D M
Sbjct: 324 TALIGGLCDANKVEDALEILKRMS-STGREPNVVTYTRVIGALCKGGQIERATKLFNDAM 382
Query: 248 KARGVL--PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+R P + YST++ LC + K +A +YF M++ + ++ + L E
Sbjct: 383 GSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGL--EL 440
Query: 306 MEET 309
++ET
Sbjct: 441 VQET 444
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 126/272 (46%), Gaps = 6/272 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM----KKRRFDPDIKSYTILLEGWG 56
M++ + L +N L+ C++ +E+A + ++M K PD+ SY ++ G+
Sbjct: 167 MEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFC 226
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+ + L + V R M G P+VV++ +++ C + DEA +F M NC+P+
Sbjct: 227 KARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAV 286
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ LI G R+ +A +F +RG EP TY A++G C + ++ DA ++ M
Sbjct: 287 TYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRM 346
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM--SRKPGTEPTVSTYEIVVRMFCYN 234
G PN TY V+ L K G+ E A +F SR +P Y +V C
Sbjct: 347 SSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQ 406
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
++ A + M ++ H+Y + + L
Sbjct: 407 SKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 145/318 (45%), Gaps = 6/318 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N ++ L K H +A+++FD M + P+I +Y I+L G + E+ ++M+
Sbjct: 40 YNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDME 99
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
P ++++ C + D A EL++ + + C + L GL ++
Sbjct: 100 SKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRL-SDECSLDRISYNMLTYGLCKADQID 158
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM----RKCGIGPNTRTY 188
AL FG+ ++ P TYN ++ YC + R+ A +++EM + + P+ +Y
Sbjct: 159 RALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSY 218
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+ V+ KA + A V +RM K G P V T+ ++ C ++D A +++ M
Sbjct: 219 NTVISGFCKARQLPTARYVLRRMI-KSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMV 277
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
R P Y+ LI ++D A YF +ML G+ P ++ L L D E
Sbjct: 278 ERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVE 337
Query: 309 TAVVLAQKIDKLRKTPLV 326
A+ + +++ + P V
Sbjct: 338 DALEILKRMSSTGREPNV 355
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 6/274 (2%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ LCK+ V+ A E++ ++ D SY +L G + + V+ EM++
Sbjct: 111 NMLVSCLCKNGKVDAAYELYKRLSDE-CSLDRISYNMLTYGLCKADQIDRALAVFGEMEE 169
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREM----EATNCKPSPHIFCTLINGLGSEK 129
+ P +++Y ++ +C A R ++A+ L EM + ++ P + + T+I+G +
Sbjct: 170 NAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKAR 229
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+L A + K G P T+N ++ C + ++++A M + M + P TY
Sbjct: 230 QLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYT 289
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ +A R ++A F M R+ G EP V TY ++ C +V+ A+ I M +
Sbjct: 290 VLITGHARALRIDKANDYFVDMLRR-GVEPNVYTYTALIGGLCDANKVEDALEILKRMSS 348
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
G P + Y+ +I +LC +++ A K F + +
Sbjct: 349 TGREPNVVTYTRVIGALCKGGQIERATKLFNDAM 382
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 109/235 (46%), Gaps = 8/235 (3%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ + F+ V +Y +NA +A ++F +M C P+ + + ++ GL + +
Sbjct: 29 RQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGIGPNTRTYDI 190
AL+ + + P N +V C + +++ AY + + +C + + +Y++
Sbjct: 89 DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSL--DRISYNM 146
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM--- 247
+ + L KA + + A +VF M P++ TY ++ +C +++ AM + +EM
Sbjct: 147 LTYGLCKADQIDRALAVFGEMEEN-AVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEG 205
Query: 248 -KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
K V+P M+ Y+T+I+ C +L A + M+ G P F+ L L
Sbjct: 206 KKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGL 260
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 2/186 (1%)
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
F +++ F+ TYNA + A + A ++ D+M PN TY IVL L
Sbjct: 24 FKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLC 83
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
+T+ A + + M K T PT ++V C N +VD A ++ + L +
Sbjct: 84 DDAKTDAALELLQDMESKMLT-PTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRI 142
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
Y+ L LC D++D A F EM + + P ++ L G E A+ L ++
Sbjct: 143 S-YNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEE 201
Query: 317 IDKLRK 322
+ + +K
Sbjct: 202 MIEGKK 207
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T D V+H L + A VFK +R+ + TV TY + A +I+D+
Sbjct: 3 TEDDVIHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDD 62
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M + LP ++ Y ++ LC + K D A + Q+M + P + + L L G
Sbjct: 63 MLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGK 122
Query: 307 EETAVVLAQKI 317
+ A L +++
Sbjct: 123 VDAAYELYKRL 133
>gi|302143554|emb|CBI22115.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 142/273 (52%), Gaps = 1/273 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N+++ L K+ +E A F K++ D +Y L+ + + EVY M+
Sbjct: 166 NQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEA 225
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G D +Y +MI + + R D A +LF+EM+ N +PS +F +L++ +G RL
Sbjct: 226 AGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDT 285
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+++ + + + G P A Y +++ ++ + ++ A R+ DEM+K G PN Y +V+
Sbjct: 286 SMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVE 345
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
K+G+ E A SVF M K G PT STY ++ M + QVD AM++++ M G+
Sbjct: 346 SHAKSGKLETAMSVFSDM-EKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLR 404
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
P + Y+ L+ L ++ +D A K EM +G
Sbjct: 405 PGLSTYTALLTLLANKKLVDVAAKVLLEMKAMG 437
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 153/329 (46%), Gaps = 9/329 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N LI +A EV++ M+ D +Y +++ + L +
Sbjct: 192 GCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAA 251
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++EMK+ P + + ++++ A R D +++++ EM+ +PS ++ +LI
Sbjct: 252 FKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIES 311
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L AL+ + + KK GF P Y VV ++ S ++ A + +M K G P
Sbjct: 312 FVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPT 371
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L +G+ + A ++ M+ G P +STY ++ + VD+A ++
Sbjct: 372 PSTYSCLLEMHSASGQVDSAMKLYNSMTNA-GLRPGLSTYTALLTLLANKKLVDVAAKVL 430
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG----QLF-SNLKQ 299
EMKA G V S ++ + +D A ++ + M GIR QLF S +K
Sbjct: 431 LEMKAMG-FSVDVSASDVLMVYIKDGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKN 489
Query: 300 ALRDEG--MEETAVVLAQKIDKLRKTPLV 326
L + + ET V A K+D + T ++
Sbjct: 490 GLYESAKPLLETYVNSAAKVDLILYTSIL 518
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 118/252 (46%), Gaps = 2/252 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + + +I +L KS ++ A ++F +MK++ P + L++ G+
Sbjct: 223 MEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGR 282
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +VY EM+ G P Y +I + A + + A+ ++ EM+ +P+ ++
Sbjct: 283 LDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTM 342
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ +L A+ F +K GF P TY+ ++ + S +++ A ++ + M G
Sbjct: 343 VVESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAG 402
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY +L L + A V M + G VS ++++ ++ + VD+A
Sbjct: 403 LRPGLSTYTALLTLLANKKLVDVAAKVLLEM-KAMGFSVDVSASDVLM-VYIKDGSVDLA 460
Query: 241 MRIWDEMKARGV 252
+R M + G+
Sbjct: 461 LRWLRFMGSSGI 472
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D+ V++ ++ A++ + A F++++ + CK + +LI ++
Sbjct: 155 DNNGVSSVIACNQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPY 214
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + + G + TY ++ + S R++ A+++ EM++ + P+ + ++
Sbjct: 215 KAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLV 274
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ KAGR + + V+ M + G P+ + Y ++ F +++ A+RIWDEMK G
Sbjct: 275 DSMGKAGRLDTSMKVYMEM-QGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGF 333
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P +Y+ ++ S KL+ A F +M G P +S L + G ++A+
Sbjct: 334 RPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMK 393
Query: 313 L 313
L
Sbjct: 394 L 394
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 147/315 (46%), Gaps = 11/315 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSR----------HVERAQEVFDKMKKRRFDPDIKSYTI 50
+ FG + ++ +N ++ LC ++ + R E +M + PD++ Y
Sbjct: 204 LPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYAT 263
Query: 51 LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN 110
+++G + + N++ M G +P+VV Y ++ CSA+R++EA +L EM +
Sbjct: 264 IIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED 323
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
C F L++ + ++ Q + G P+ TY V+ +C +++A
Sbjct: 324 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAV 383
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
++ M CG PNT +Y IVL L +A R +A + M ++ G P T+ ++
Sbjct: 384 MLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQ-GCLPNPVTFNTLINF 442
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C + A+ + +M G P + YST+I+ L K ++A + M++ GI P
Sbjct: 443 MCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 502
Query: 291 GQLFSNLKQALRDEG 305
++S++ AL EG
Sbjct: 503 TIIYSSMASALSREG 517
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 144/306 (47%), Gaps = 1/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +GLK + +N ++ LC + E A+++ +M + D ++ IL++ + Q
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ +M + G PDV++Y +IN C DEAV L + M A CKP+ +
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL +R +A + ++G P T+N ++ C A ++ +M G
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +Y V+ L KAG+TEEA + M K G P Y + + D
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINK-GITPNTIIYSSMASALSREGRTDKI 522
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++++D ++ V +Y+ +I+SLC + D A +F M+ G P ++ L +
Sbjct: 523 IQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRG 582
Query: 301 LRDEGM 306
L EG+
Sbjct: 583 LASEGL 588
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 139/323 (43%), Gaps = 11/323 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G P + +++ C+ A + + D + +++ +Q +
Sbjct: 138 GCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEG 197
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM----EATN------CKPS 114
E+ R++ G EPD+VSY ++ C AKR+D+ EL EM EA + C P
Sbjct: 198 VELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPD 257
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
++ T+I+G+ + A + G +P YN V+ C + R +A ++
Sbjct: 258 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 317
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
EM + + T++I++ + G + + ++M G P V TY V+ FC
Sbjct: 318 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH-GCIPDVITYTTVINGFCKE 376
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
VD A+ + M A G P Y+ ++ LC ++ DA + M+ G P F
Sbjct: 377 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 436
Query: 295 SNLKQALRDEGMEETAVVLAQKI 317
+ L + +G+ E A+ L +++
Sbjct: 437 NTLINFMCKKGLAEQAIELLKQM 459
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 11/173 (6%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P A TY +V + C I DA ++DEM G ++L + G A
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+ + K G +VV C VD + + ++ + G P + Y+ ++ LC
Sbjct: 166 LQVLHAK-GCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224
Query: 268 HEDKLDDACKYFQEMLDI----------GIRPPGQLFSNLKQALRDEGMEETA 310
+ DD + EM+ + G P ++++ + + +G E A
Sbjct: 225 MAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVA 277
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 79/209 (37%), Gaps = 11/209 (5%)
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI L + R ++A + + G YNA++ YC R
Sbjct: 49 ALIRSLCAAGRTADAARALDTA---GDAAGVVAYNAMIAGYC---RAGQVAAARRLAAAV 102
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ PN TY ++ L G +A +V M + G T +++ C
Sbjct: 103 PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLR-GCAATPPMCHVILEAACRGGGFRS 161
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP----GQLFS 295
A+R + A+G + +++++C + +D+ + +++ G P +
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L A R + +EE V + + + L + P
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMP 250
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 7/171 (4%)
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
+A++ + C + R DA R +D G Y+ ++ +AG+ A + +
Sbjct: 48 SALIRSLCAAGRTADAARALDTA---GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP- 103
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
P TY +VR C + A+ + DEM RG M ++ + C
Sbjct: 104 ---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
A + Q + G + + A+ ++G + V L +K+ P
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEP 211
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 2/306 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL + N + +LCK + A E FD M + P++ +Y++LL G+ +
Sbjct: 323 MTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGC 382
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M ++ M+ +G D + I+I+A+ DE + +F +M+ P +
Sbjct: 383 FVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGI 442
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I RL++A+ F Q G +PE Y++++ +C + A ++ EM G
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRG 502
Query: 181 IG-PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I PN ++ +++ L K GR EA+ +F + G P V T+ ++ + +++
Sbjct: 503 IPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHI-GERPDVITFNSLIDGYGLVGKIEK 561
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + D M + G+ P + Y+TLI+ C ++DD F EML G++P + +
Sbjct: 562 AFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILH 621
Query: 300 ALRDEG 305
L ++G
Sbjct: 622 GLFNDG 627
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 148/297 (49%), Gaps = 8/297 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNL 61
G+ ++ + +ID LCK+R +++A+ V +M F P+ +Y ++ G+ GQ K
Sbjct: 257 GVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKET 316
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
M +REM G P++V+ +++ C + EA E F M A KP+ + L
Sbjct: 317 AGM---FREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVL 373
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++G +E + L F + G + +N V+ AY +++ + +M++ G+
Sbjct: 374 LHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGV 433
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ TY IV+ + GR +A F +M G +P Y +++ FC + + A
Sbjct: 434 IPDACTYGIVIAAFSRMGRLADAMDKFNQMIAM-GLKPEGIVYHSLIQGFCMHGNLVKAK 492
Query: 242 RIWDEMKARGV-LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ EM +RG+ P + ++++INSLC E ++ +A F ++ IG RP F++L
Sbjct: 493 ELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSL 549
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 142/303 (46%), Gaps = 3/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQ 58
M + G++ + +N ++ TLC+ +RA ++ M K+ P++ +Y ++ G ++
Sbjct: 181 MPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFRE 240
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ ++ EM G PDVV+Y +I+A C A+ D+A + R+M + +P+ +
Sbjct: 241 GEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTY 300
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I+G + E F + +G P T N+ + + C + +A D M
Sbjct: 301 NCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAA 360
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G PN TY ++LH G + ++F M G + IV+ + +D
Sbjct: 361 KGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGN-GIVADQRVFNIVIDAYGKRGMMD 419
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
M I+ +M+ +GV+P Y +I + +L DA F +M+ +G++P G ++ +L
Sbjct: 420 ETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLI 479
Query: 299 QAL 301
Q
Sbjct: 480 QGF 482
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 144/302 (47%), Gaps = 2/302 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N +I L + V +A +F +M ++ PD+ +YT +++ + + +
Sbjct: 222 GCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKA 281
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V R+M +GF+P+ V+Y MI+ + + ++ E +FREM + P+ + ++
Sbjct: 282 ELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSS 341
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + EA +FF +G +P TY+ ++ Y D + + M GI +
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVAD 401
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
R ++IV+ K G +E +F +M + G P TY IV+ F ++ AM +
Sbjct: 402 QRVFNIVIDAYGKRGMMDETMLIFTQMQEQ-GVIPDACTYGIVIAAFSRMGRLADAMDKF 460
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI-RPPGQLFSNLKQALRD 303
++M A G+ P +Y +LI C L A + EM+ GI RP F+++ +L
Sbjct: 461 NQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCK 520
Query: 304 EG 305
EG
Sbjct: 521 EG 522
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 146/307 (47%), Gaps = 5/307 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG-WGQQKNLLSMNEVYREM 71
+N L+D C++R +F + K D+ +ILL+ + +++ +N + M
Sbjct: 122 YNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRM 181
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIFCTLINGLGSEK 129
+ G EPD +SY ++ C R A++L M ++ C P+ + T+I+GL E
Sbjct: 182 PELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREG 241
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+S+A F + ++G P+ TY +++ A C + ++ A ++ +M G PN TY+
Sbjct: 242 EVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYN 301
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++H +G+ +E +F+ M+ + G P + T + C + + A +D M A
Sbjct: 302 CMIHGYSISGQWKETAGMFREMTSQ-GLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAA 360
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEE 308
+G P + YS L++ E D F M GI ++F+ + A G M+E
Sbjct: 361 KGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDE 420
Query: 309 TAVVLAQ 315
T ++ Q
Sbjct: 421 TMLIFTQ 427
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 2/311 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + + +I + + A + F++M P+ Y L++G+ N
Sbjct: 428 MQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGN 487
Query: 61 LLSMNEVYREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L+ E+ EM G P++V + +IN+ C R EA ++F + +P F
Sbjct: 488 LVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFN 547
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI+G G ++ +A G EP+ +YN ++ YC + RI+D + EM
Sbjct: 548 SLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSK 607
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P T TY I+LH L GRT A + M + GT +ST I++ C N D
Sbjct: 608 GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMI-ESGTTMDISTCGIILGGLCRNNCDDE 666
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ ++ ++ A V + + +T+I+++ K ++A + F + G+ P + + +
Sbjct: 667 AIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIK 726
Query: 300 ALRDEGMEETA 310
L EG E A
Sbjct: 727 NLLKEGSVEEA 737
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 120/260 (46%), Gaps = 12/260 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ +N LID C++ ++ +F +M + P +Y I+L G
Sbjct: 569 MISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + G D+ + GI++ C DEA+ +F+++ A N K + I T
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINT 688
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + ++ EA + F G P A TY ++ + +A M M K G
Sbjct: 689 MIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYS-VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P++R + ++ L++ G +A + +FK ++ E ST +++ +F
Sbjct: 749 CAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLE--ASTVSLLMALFSREG---- 802
Query: 240 AMRIWDEMKARGVLPVMHMY 259
+ W+++K +LP + +
Sbjct: 803 --KYWEDVK---LLPAKYQF 817
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 14/221 (6%)
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L R + C+ P + L N + E +++ R P TYN ++ C
Sbjct: 82 LARAPSSAACRDGPSLAVALFNRICRE-----------EARPRVALPTVCTYNILMDCCC 130
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ R + + K G+ + I+L L A R+++ ++ + G EP
Sbjct: 131 RTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDT 190
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEM--KARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
+Y VV+ C +++ A+ + M K+ G P + Y+T+I+ L E ++ AC F
Sbjct: 191 ISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLF 250
Query: 280 QEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDK 319
EM+ G+ P ++++ AL + M++ +VL Q I
Sbjct: 251 HEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISN 291
>gi|225446845|ref|XP_002279656.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
mitochondrial-like [Vitis vinifera]
Length = 844
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 142/274 (51%), Gaps = 1/274 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N+++ L K+ +E A F K++ D +Y L+ + + EVY M+
Sbjct: 253 NQVVRDLAKAEKLEVAFCCFKKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEA 312
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G D +Y +MI + + R D A +LF+EM+ N +PS +F +L++ +G RL
Sbjct: 313 AGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDT 372
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+++ + + + G P A Y +++ ++ + ++ A R+ DEM+K G PN Y +V+
Sbjct: 373 SMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVE 432
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
K+G+ E A SVF M K G PT STY ++ M + QVD AM++++ M G+
Sbjct: 433 SHAKSGKLETAMSVFSDM-EKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAGLR 491
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
P + Y+ L+ L ++ +D A K EM +G
Sbjct: 492 PGLSTYTALLTLLANKKLVDVAAKVLLEMKAMGF 525
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 151/329 (45%), Gaps = 9/329 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N LI +A EV++ M+ D +Y +++ + L +
Sbjct: 279 GCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKSGRLDAA 338
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++EMK+ P + + ++++ A R D +++++ EM+ +PS ++ +LI
Sbjct: 339 FKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEMQGFGLRPSATMYVSLIES 398
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L AL+ + + KK GF P Y VV ++ S ++ A + +M K G P
Sbjct: 399 FVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDMEKAGFLPT 458
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L +G+ + A ++ M+ G P +STY ++ + VD+A ++
Sbjct: 459 PSTYSCLLEMHSASGQVDSAMKLYNSMTNA-GLRPGLSTYTALLTLLANKKLVDVAAKVL 517
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EMKA G V S ++ + +D A ++ + M GIR + L ++
Sbjct: 518 LEMKAMG-FSVDVSASDVLMVYIKDGSVDLALRWLRFMGSSGIRTNNFIIRQLFESCMKN 576
Query: 305 GMEETAVVL-------AQKIDKLRKTPLV 326
G+ E+A L A K+D + T ++
Sbjct: 577 GLYESAKPLLETYVNSAAKVDLILYTSIL 605
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 129/281 (45%), Gaps = 3/281 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + + +I +L KS ++ A ++F +MK++ P + L++ G+
Sbjct: 310 MEAAGCLLDGSTYELMIPSLAKSGRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGR 369
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + +VY EM+ G P Y +I + A + + A+ ++ EM+ +P+ ++
Sbjct: 370 LDTSMKVYMEMQGFGLRPSATMYVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTM 429
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ +L A+ F +K GF P TY+ ++ + S +++ A ++ + M G
Sbjct: 430 VVESHAKSGKLETAMSVFSDMEKAGFLPTPSTYSCLLEMHSASGQVDSAMKLYNSMTNAG 489
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY +L L + A V M + G VS ++++ ++ + VD+A
Sbjct: 490 LRPGLSTYTALLTLLANKKLVDVAAKVLLEM-KAMGFSVDVSASDVLM-VYIKDGSVDLA 547
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
+R M + G+ + L S C ++ L ++ K E
Sbjct: 548 LRWLRFMGSSGIRTNNFIIRQLFES-CMKNGLYESAKPLLE 587
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 127/270 (47%), Gaps = 5/270 (1%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINA----HCSAKRYDEAVELF 103
Y +L + Q ++ ++ ++ EM D + + VS I N A++ + A F
Sbjct: 213 YALLFDRLNQSRDFDAIQSLFDEMIRDSGDNNGVSSVIACNQVVRDLAKAEKLEVAFCCF 272
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
++++ + CK + +LI ++ +A + + + G + TY ++ + S
Sbjct: 273 KKVQDSGCKIDTATYNSLITLFLNKGLPYKAFEVYESMEAAGCLLDGSTYELMIPSLAKS 332
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
R++ A+++ EM++ + P+ + ++ + KAGR + + V+ M + G P+ +
Sbjct: 333 GRLDAAFKLFQEMKEKNLRPSFLVFASLVDSMGKAGRLDTSMKVYMEM-QGFGLRPSATM 391
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y ++ F +++ A+RIWDEMK G P +Y+ ++ S KL+ A F +M
Sbjct: 392 YVSLIESFVKAGKLETALRIWDEMKKAGFRPNYGLYTMVVESHAKSGKLETAMSVFSDME 451
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
G P +S L + G ++A+ L
Sbjct: 452 KAGFLPTPSTYSCLLEMHSASGQVDSAMKL 481
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 4/291 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++FG + D + L+ TL + VE A E F + +FD K+YTIL+ GW
Sbjct: 173 MERFGFLPTVADLHSLLFTLSHNGLVEHA-EAFFRESPIQFDVSAKTYTILISGWAVVAK 231
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME-ATNCKPSPHIFC 119
+++ EM + G +PDV +Y +I+A C A E ++M+ + P +
Sbjct: 232 PEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAPDAATYG 291
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+ + K AL+ + + R P TYNAV+ C +++AY +++EM
Sbjct: 292 PFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDEAYNILNEMATY 351
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ +Y+ +L+ K +A + RM P +Y ++++M +VD
Sbjct: 352 GEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEG-LCLPNRHSYNMILKMLIAIGRVDR 410
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSL-CHEDKLDDACKYFQEMLDIGIRP 289
A+ +WD M+ RG P Y+ +I+ L C + + ++AC YF M+D GI P
Sbjct: 411 AIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEACSYFLRMVDDGIPP 461
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 1/207 (0%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ ++ A+ A D+A+ F ME P+ +L+ L + A FF +S
Sbjct: 150 FPLLFRAYARAGLPDDAIRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFRESP 209
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
+ F+ A TY ++ + + A ++ DEM + G+ P+ Y+ ++ L + G
Sbjct: 210 IQ-FDVSAKTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVA 268
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
A K M R G P +TY +R C + A+R+ D M+AR + P + Y+ +
Sbjct: 269 LAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAV 328
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRP 289
I LC ++D+A EM G +P
Sbjct: 329 IRLLCELGEVDEAYNILNEMATYGEKP 355
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 69/179 (38%), Gaps = 36/179 (20%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I LC+ V+ A + ++M PD+ SY LL
Sbjct: 325 YNAVIRLLCELGEVDEAYNILNEMATYGEKPDVWSYNTLL-------------------- 364
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
N HC K ++A+ L M+ C P+ H + ++ L + R+
Sbjct: 365 ---------------NTHCKLKEVNKALRLISRMDEGLCLPNRHSYNMILKMLIAIGRVD 409
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVV-GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
A++ + +KRGF P A TY ++ G C R +A M GI P T +
Sbjct: 410 RAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEACSYFLRMVDDGIPPYQATCQV 468
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 134/262 (51%), Gaps = 2/262 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A VF KM+ + P KSY + + ++ ++ Y+EM++ G P VVS I+I
Sbjct: 104 AIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIK 163
Query: 89 AHC-SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
A C + + + A LFREM C+P + + TLINGL ++S+A + + +++G
Sbjct: 164 ALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLS 223
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P +Y +++ C S +++A +++EM GI PN TY ++ L K+G + +A +
Sbjct: 224 PSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMEL 283
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+ M R+ P + TY ++ C + A+ I D M+ +G+ P MY +I+ LC
Sbjct: 284 LEVMVRRR-LLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLC 342
Query: 268 HEDKLDDACKYFQEMLDIGIRP 289
+A + EM GI P
Sbjct: 343 AACNYQEAANFIDEMALGGISP 364
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 17/279 (6%)
Query: 4 FGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG 54
F L +E+P+ + LI+ LCK + +A+E+ D+M+++ P + SYT L+ G
Sbjct: 176 FRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHG 235
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
Q NL E+ EM +G EP+V +Y +++ C + +A+EL M P+
Sbjct: 236 LCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPN 295
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ TLINGL E + EA++ + + +G +P+A Y ++ C + +A +D
Sbjct: 296 MVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFID 355
Query: 175 EMRKCGIGPN--TRTYDIVLHHLIKAGRTEE-----AYSVFKRMSRKPGTEPTVSTYEIV 227
EM GI PN + T+ + +H+++ G A+ ++ M R G + T++ +
Sbjct: 356 EMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSM-RTRGISVEIGTFDCL 414
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
V+ FC ++ A RI +EM G +P M++ L+ L
Sbjct: 415 VKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGL 453
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 150/328 (45%), Gaps = 10/328 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M + G+ + N LI LCK+ VE A +F +M R PD +Y L+ G +
Sbjct: 146 MREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLG 205
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ E+ EM++ G P VVSY +I+ C + DEA+EL EM +P+ +
Sbjct: 206 KISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYS 265
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+L++GL S+A++ +R P TY+ ++ C + +A ++D MR
Sbjct: 266 SLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQ 325
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT-------VSTYEIVVRMFC 232
G+ P+ Y ++ L A +EA + M+ G P V + +VV+ C
Sbjct: 326 GLKPDAGMYGRIISGLCAACNYQEAANFIDEMALG-GISPNRASWTFHVKMHNMVVQGLC 384
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
N A +++ M+ RG+ + + L+ C L+ A + +EM+ G P
Sbjct: 385 NNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEG 444
Query: 293 LFSNLKQALRD-EGMEETAVVLAQKIDK 319
+++ L L D + + ET +L ++ +
Sbjct: 445 MWNVLMCGLWDRKKVRETTELLVAELKQ 472
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 2/264 (0%)
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L M + E +GF D ++G MI+ S ++ A + M+ +C+ + +F T+
Sbjct: 32 LVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTI 91
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
G G R +A++ F + + +P +Y V + A EMR+ GI
Sbjct: 92 CRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGI 151
Query: 182 GPNTRTYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P + +I++ L K T E A+ +F+ M + G +P TY ++ C ++ A
Sbjct: 152 PPTVVSLNILIKALCKNEETVESAFRLFREMPNR-GCQPDSYTYGTLINGLCKLGKISQA 210
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ DEM+ +G+ P + Y++LI+ LC + LD+A + +EM+ GI P +S+L
Sbjct: 211 KELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDG 270
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L G A+ L + + + R P
Sbjct: 271 LCKSGHSSQAMELLEVMVRRRLLP 294
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 153/317 (48%), Gaps = 1/317 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+++FGL + + LID CK +V A+ +F KM + P+ +Y++L+ G+ +Q
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGL 243
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++Y MK G P+ +Y +I+ +C+ D+A ++F EM +
Sbjct: 244 QREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNI 303
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL K+ EA++ + K G P TYN ++ +C +++ A R+ ++++ G
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSG 363
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ ++ K A + K M + P+ TY I++ F + A
Sbjct: 364 LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC-IAPSKVTYTILIDAFARLNYTEKA 422
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M+ G++P ++ YS LI+ LC + +A K F+ + ++ ++P +++ +
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482
Query: 301 LRDEGMEETAVVLAQKI 317
EG A+ L ++
Sbjct: 483 YCKEGSSYRALRLLNEM 499
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ +N LI C V++A +VF +M+++ + +Y IL+ G + K
Sbjct: 254 MKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++ G P++V+Y I+IN C + D AV LF +++++ P+ + T
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNT 373
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + L+ AL + ++R P TY ++ A+ A M M K G
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSG 433
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +++H L G +EA +FK + +P Y ++ +C A
Sbjct: 434 LVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMH-LQPNSVIYNTMIHGYCKEGSSYRA 492
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+R+ +EM G++P + + + I LC ++K +A +M++ G++P L+
Sbjct: 493 LRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 149/347 (42%), Gaps = 37/347 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ L +S + ++A +F+++K + D S+ I+++G + + + ++
Sbjct: 127 FNNLMCLLIRSNYFDKAWWIFNELKSKVV-LDAYSFGIMIKGCCEAGYFVKGFRLLAMLE 185
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+VV Y +I+ C A LF +M+ P+PH + L+NG +
Sbjct: 186 EFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQR 245
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR--------------- 177
E Q + K+ G P A YN ++ YC ++ A+++ EMR
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILI 305
Query: 178 --------------------KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
K G+ PN TY+I+++ G+ + A +F ++ + G
Sbjct: 306 GGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQL-KSSGL 364
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
PT+ TY ++ + + A+ + EM+ R + P Y+ LI++ + + AC+
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACE 424
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
M G+ P +S L L G + A L + + ++ P
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQP 471
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/285 (18%), Positives = 100/285 (35%), Gaps = 70/285 (24%)
Query: 109 TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN-------------- 154
T C ++ T++N +AL F G P + T+N
Sbjct: 83 TPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDK 142
Query: 155 -----------AVVGAYCWSMRIND---------AYRMMDEMRKCGIGPNT--------- 185
V+ AY + + I +R++ + + G+ PN
Sbjct: 143 AWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDG 202
Query: 186 --------------------------RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
TY ++++ K G E + +++ M R G P
Sbjct: 203 CCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRS-GIVP 261
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
Y ++ +C VD A +++ EM+ +G+ + Y+ LI LC K +A K
Sbjct: 262 NAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLV 321
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++ +G+ P ++ L D G +TAV L ++ +P
Sbjct: 322 HKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSP 366
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 1/283 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N LI CK VE ++ ++M +R PD+ +Y +LL G +
Sbjct: 472 GLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEA 531
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ E K +G PD +YGIMI+ +C A R +E +LF+EM + + ++ TLI
Sbjct: 532 GGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRA 591
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ EA + + RG + TY++++ ++ A +++DEMRK G+ PN
Sbjct: 592 YCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPN 651
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ K G+ + S+ + MS P TY I++ C + A ++
Sbjct: 652 VVCYTALIGGYCKLGQMHKVDSILQEMSIN-NVHPNKITYTIMINGHCKLGNMKAAAKLL 710
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+EM +G++P Y+ L N C E K+++A K M GI
Sbjct: 711 NEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGI 753
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 144/313 (46%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL L N L+ +L K+ V+ + +VFD M PD+ ++ ++ + +
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDA 216
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E++R+M+ G P+VV+Y +I+ C R DEA + +ME KPS + LING
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLING 276
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +R EA + RG+ P YN ++ YC I+ A ++ D+M GI PN
Sbjct: 277 LVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPN 336
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ T + ++ K+ + E A + + M G T+ V+ C + D A+
Sbjct: 337 SVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGV-INQGTFTSVIHRLCLKCRFDSALLFI 395
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM R P + + L++ LC K +A + + +L+ G + L L +
Sbjct: 396 MEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEA 455
Query: 305 GMEETAVVLAQKI 317
G +E A L +++
Sbjct: 456 GSKEEAAKLLKEM 468
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 141/321 (43%), Gaps = 8/321 (2%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N LI LC++ E A ++ +M +R D SY L+ ++ + ++ EM
Sbjct: 446 NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR 505
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G +PD+ +Y ++++ C+ + +EA L+ E + P + + +I+G R+ E
Sbjct: 506 RGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEE 565
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ F + E A Y ++ AYC + + +A+R+ D+MR GI + TY ++H
Sbjct: 566 GEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIH 625
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L G + A + M RK G P V Y ++ +C Q+ I EM V
Sbjct: 626 GLSNIGLVDSANQLLDEM-RKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVH 684
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P Y+ +IN C + A K EM GI P ++ L EG E A+ +
Sbjct: 685 PNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKV 744
Query: 314 AQ-------KIDKLRKTPLVD 327
+D + T L+D
Sbjct: 745 CDLMSTGGISLDDITYTTLID 765
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 1/283 (0%)
Query: 31 EVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAH 90
E+F + + P +K+ LL + + +V+ M G PDV + M+NA
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207
Query: 91 CSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
C+ R D+A+ELFR+ME P+ + +I+GL RL EA QF + +K +P
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267
Query: 151 PTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
TY ++ R ++A ++ EM G PN Y+ ++ + G A +
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M G P T +++ +C + Q++ A + +EM G + ++++I+ LC +
Sbjct: 328 MISN-GISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKC 386
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ D A + EML +P L + L L G + A+ L
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIEL 429
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 165/415 (39%), Gaps = 85/415 (20%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G+ + +N +I LCK+ ++ A + +KM+K R P + +Y +L+ G + +
Sbjct: 223 MEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLER 282
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP----- 115
N + +EM D G+ P+ V Y +I+ +C A+++ +M + P+
Sbjct: 283 FDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNS 342
Query: 116 ---------------HI---------------FCTLINGLGSEKRLSEALQFFGQSKKRG 145
H+ F ++I+ L + R AL F + R
Sbjct: 343 LIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN 402
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
F+P +V C + + ++A + + + G NT T + ++H L +AG EEA
Sbjct: 403 FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAA 462
Query: 206 SVFKRMSRKP----------------------------------GTEPTVSTYEIVVRMF 231
+ K M + G +P + TY +++
Sbjct: 463 KLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGL 522
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
C +++ A +W E K G P + Y +I+ C +++++ K FQEM+ + I
Sbjct: 523 CNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNA 582
Query: 292 QLFSNLKQA----------------LRDEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
++ L +A +R G+ +T+ + I L LVD
Sbjct: 583 VVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSAN 637
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 128/265 (48%), Gaps = 1/265 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ ++ +N L+ LC +E A ++ + KK PD +Y I+++G+ +
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANR 562
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++++EM E + V YG +I A+C EA L +M + + + +
Sbjct: 563 VEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSS 622
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + + A Q + +K G P Y A++G YC +++ ++ EM
Sbjct: 623 LIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINN 682
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY I+++ K G + A + M++K G P TY + FC +++ A
Sbjct: 683 VHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQK-GIVPDAVTYNALTNGFCKEGKMEEA 741
Query: 241 MRIWDEMKARGVLPVMHMYSTLINS 265
+++ D M G+ Y+TLI+
Sbjct: 742 LKVCDLMSTGGISLDDITYTTLIDG 766
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ Q ++ LI L V+ A ++ D+M+K P++ YT L+ G+ + + +
Sbjct: 612 GIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKV 671
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + +EM + P+ ++Y IMIN HC A +L EM P + L NG
Sbjct: 672 DSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNG 731
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
E ++ EAL+ G + TY ++ +
Sbjct: 732 FCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGW 767
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
+ +F ++ K G P++ T ++ +V M+ +++D M GV P ++++ST++
Sbjct: 146 VFELFSLLANK-GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMV 204
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
N+ C ++DDA + F++M +G+ P ++N+ L G + A +K++K R
Sbjct: 205 NAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVK 264
Query: 324 P-LVDRG 329
P LV G
Sbjct: 265 PSLVTYG 271
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N LI CK V+ E+ ++M K+ PDI ++ +LL G +
Sbjct: 531 GLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEA 590
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ ++ E K +G+ P+V +YG+MI+ +C A + +E L E+ + + + ++ +LI
Sbjct: 591 SRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRA 650
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ A + K RG TY++++ C ++DA ++DEMRK G+ PN
Sbjct: 651 YCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPN 710
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ K G+ + V + MS P TY I++ FC + A ++
Sbjct: 711 VVCYTTIIGGYSKLGQMNKVNIVLQEMSSH-NIHPNKFTYTIMIDGFCKLGKTKEAAKLL 769
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+EM +G+LP Y+ N LC E K+++A K EM
Sbjct: 770 NEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEM 807
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 150/321 (46%), Gaps = 8/321 (2%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N LI LCK+ +++ ++ M +R D +Y L+ G ++ + E+ EM
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G +PD+ ++ ++++ C+A + DEA L+ E + P+ + + +I+G ++ E
Sbjct: 565 KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEE 624
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ + E + YN+++ AYC + +N A+R+ D+M+ G+ + TY ++H
Sbjct: 625 GENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMH 684
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L G ++A + M RK G P V Y ++ + Q++ + EM + +
Sbjct: 685 GLCNIGLVDDAKHLLDEM-RKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIH 743
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P Y+ +I+ C K +A K EM + GI P ++ L EG E A +
Sbjct: 744 PNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKV 803
Query: 314 -------AQKIDKLRKTPLVD 327
A +D++ T L+D
Sbjct: 804 CDEMSSGAVCLDEITYTTLID 824
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 131/285 (45%), Gaps = 1/285 (0%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A +VF + K+ P +K+ T LL + L EVY + G PDV + MIN
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
A C R D+A+ LF +ME P+ + +I+GL RL EA +F + K P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TY+ + +I++A ++ EM + G PN Y+ ++ K G EA +
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K G P T +++ FC + Q+ A + +EM RG+ +S +IN LC
Sbjct: 385 DDMLSK-GISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCL 443
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
+ + A + +EML +RP L + L L G + AV L
Sbjct: 444 KFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVEL 488
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 140/301 (46%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G+ + +N +I LCKS ++ A +KM K + P + +Y++ + G + +
Sbjct: 282 MEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEK 341
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ N V +EM + GF P+ V Y +I+ +C EA+++ +M + P+ +
Sbjct: 342 IDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNS 401
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G ++ +A + RG +++ V+ C R A + EM
Sbjct: 402 LIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN 461
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN ++ L KAG+ EA ++ R+ K G P + T ++ C +
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK-GFVPNIVTSNALIHGLCKAGNMQET 520
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ +M RG++ Y+TLI+ C E K+ + + +EM+ GI+P F+ L
Sbjct: 521 LKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHG 580
Query: 301 L 301
L
Sbjct: 581 L 581
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 151/347 (43%), Gaps = 37/347 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR--------------------RF--- 41
G+ N LI CKS + +A+ V ++M R RF
Sbjct: 391 GISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTA 450
Query: 42 ------------DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINA 89
P+ T L+ G + E++ + GF P++V+ +I+
Sbjct: 451 LHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHG 510
Query: 90 HCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
C A E ++L R+M + TLI+G E ++ E + + K+G +P+
Sbjct: 511 LCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPD 570
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
T+N ++ C + +I++A R+ E +K G PN TY +++ KA + EE ++
Sbjct: 571 IYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLN 630
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+ K E Y ++R +C N ++ A R+ D+MK+RGVL YS+L++ LC+
Sbjct: 631 ELVSKK-LELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNI 689
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQ 315
+DDA EM G+ P ++ + G M + +VL +
Sbjct: 690 GLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQE 736
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 2/269 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ ++ FN L+ LC + ++ A ++ + KK + P++ +Y ++++G+ +
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + E+ E + V Y +I A+C + A L +M++ S + +
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++GL + + +A + +K G P Y ++G Y ++N ++ EM
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY I++ K G+T+EA + M+ K G P TY C +V+ A
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEK-GILPDAVTYNAFTNGLCKEGKVEEA 800
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHE 269
++ DEM + V Y+TLI+ CH+
Sbjct: 801 FKVCDEMSSGAVCLDEITYTTLIDG-CHQ 828
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 151/329 (45%), Gaps = 5/329 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K GL L L+ +L K+ ++++ EV+D + PD+ ++ ++ + +
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +M+ G P+VV+Y +I+ C + R DEA +M PS +
Sbjct: 272 EDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSV 331
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
INGL +++ EA + + GF P YN ++ YC I++A ++ D+M G
Sbjct: 332 FINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN+ T + ++ K+ + +A +V + M + G ++ +V+ C + A
Sbjct: 392 ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGR-GLPINQGSFSMVINWLCLKFRFVTA 450
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ EM R + P + +TL++ LC K +A + + +L G P + L
Sbjct: 451 LHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHG 510
Query: 301 LRDEG-MEETAVVLAQKIDKLRKTPLVDR 328
L G M+ET +L D L + + DR
Sbjct: 511 LCKAGNMQETLKLLR---DMLERGLVFDR 536
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A VF +++K G P++ T ++ ++ + ++D + G++P +H++ST+I
Sbjct: 205 AADVFSLLAKK-GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMI 263
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
N+ C + DDA F +M +G+ P ++N+ L G + A +K+ K + +
Sbjct: 264 NAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVS 323
Query: 324 P 324
P
Sbjct: 324 P 324
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 159/313 (50%), Gaps = 5/313 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG---WGQQKNLLSMNEVYR 69
FN +I LCK+ + +A +V M+ P + +Y L++G WG+ + ++ + +
Sbjct: 191 FNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLK 250
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM G P+VV++ ++IN +C A+++F EM + + +L++GL E
Sbjct: 251 EMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREG 310
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ ++++ + ++ G PT N+V+ +C + +A +D M + G+ PN TY+
Sbjct: 311 KVEDSMKLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYN 369
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ + G+ +EA + M+ K G P V TY ++ F + + DEMK
Sbjct: 370 TLIDGYQRLGKMKEATAAKGAMAGK-GISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKE 428
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
GV + Y+ LI +LC + ++ A K EM+++G+ P + ++ + ++G +
Sbjct: 429 TGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKG 488
Query: 310 AVVLAQKIDKLRK 322
A + +++K +K
Sbjct: 489 AHDIRIRMEKCKK 501
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 131/292 (44%), Gaps = 8/292 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G+ + FN LI+ CK ++ A +VF++M++ ++ +YT L+ G ++
Sbjct: 252 MNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGK 311
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM++ G + + ++N C EA M KP+ + T
Sbjct: 312 VEDSMKLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNT 370
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ EA G +G P+ TYN ++ + S ++DEM++ G
Sbjct: 371 LIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETG 430
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + TY++++ L G +A + M + G EP TY ++ FC A
Sbjct: 431 VKADLVTYNVLIGALCCKGEVRKAVKLLDEMV-EVGLEPKHRTYNAIINGFCEKGDAKGA 489
Query: 241 MRIWDEM---KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
I M K R + +++ + C K+D+A EML+ G+ P
Sbjct: 490 HDIRIRMEKCKKRANVVTCNVF---LKYFCKMGKMDEANVVLNEMLEKGLVP 538
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 2/227 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ GL LP N +++ CK + A+ D M ++ P++ +Y L++G+ +
Sbjct: 322 MEELGLAT-LPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGK 380
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M G PDV +Y +I ++ + L EM+ T K +
Sbjct: 381 MKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNV 440
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L + + +A++ + + G EP+ TYNA++ +C A+ + M KC
Sbjct: 441 LIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCK 500
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
N T ++ L + K G+ +EA V M K G P TYEI+
Sbjct: 501 KRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEK-GLVPNRITYEII 546
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
+PS L+ L R+ A + F + +R P+ T+N V+ C + ++ A
Sbjct: 150 RPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGD 209
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV---FKRMSRKPGTEPTVSTYEIVV 228
+ +MR G+ P+ TY+ ++ K GR + Y V K M++ G P V T+ +++
Sbjct: 210 VAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQA-GISPNVVTFNVLI 268
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+C + + A+++++EM+ G+ M Y++L++ LC E K++D+ K +EM ++G+
Sbjct: 269 NGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGL 327
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+ P S ++ A A R D A FR P F +I+GL +L +A
Sbjct: 149 YRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAG 208
Query: 136 QFFGQSKKRGFEPEAPTYNAVV-GAYCWSMRINDAYR---MMDEMRKCGIGPNTRTYDIV 191
+ G P TYN ++ G Y W R Y ++ EM + GI PN T++++
Sbjct: 209 DVAKDMRGWGLMPSVVTYNTLIDGYYKWG-RAGKMYHVDMLLKEMNQAGISPNVVTFNVL 267
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ K A VF+ M R+ G + TY +V C +V+ +M++ +EM+ G
Sbjct: 268 INGYCKESNITAAIKVFEEM-RQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELG 326
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
L + ++++N C + + +A + M G++P
Sbjct: 327 -LATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKP 363
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 153/314 (48%), Gaps = 3/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID C+ ++ A E+ +KM+ +I + ++ G + + E +RE +
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKR 308
Query: 73 DDGFEP--DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
E + V+Y ++ A A+ELF E + P ++ T+I+GL R
Sbjct: 309 TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L +A K+ GF+ + YN ++ +C R+++AY ++ EM++ GI P+ TY+
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L KAG + +M G +P+V T+ +V +C ++D A+RI M
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDD-GCQPSVITFGTLVHGYCKVGKIDEALRILRSMDES 487
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G+ P +Y+TLI+ LC +D A + F EM + + F+ L + LRD+ M E A
Sbjct: 488 GIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547
Query: 311 VVLAQKIDKLRKTP 324
L ++ + R P
Sbjct: 548 FELMDQMREERCFP 561
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 6/251 (2%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKD-DGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
D+ ++ +L + +++ M +Y M+ PDVV+YGI++N C A R +A+ +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194
Query: 103 FREMEATNCKPSPHIFC--TLINGLGSEKRLSEALQFFGQ--SKKRGFEPEAPTYNAVVG 158
M + P + T+++GL R+ EAL F Q S G P TYN ++
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK-RMSRKPGT 217
A+C I+ AY ++++M G+ N T + ++ L +AGRT A F+ + + P
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+ TY +V + V MAM ++ E + G P MY T+I+ L +L+DAC
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 278 YFQEMLDIGIR 288
M + G +
Sbjct: 375 MASSMKEAGFK 385
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 106/202 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + +N LI C+ + + A E+ +MK+ PD+ +Y LL G + +
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++E+ +M DDG +P V+++G +++ +C + DEA+ + R M+ + P+ I+ T
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + A++ F + K++ T+NA++ A+ +MD+MR+
Sbjct: 499 LIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREER 558
Query: 181 IGPNTRTYDIVLHHLIKAGRTE 202
P+ T D+++ L G T+
Sbjct: 559 CFPDYVTVDVLMEWLPVIGETD 580
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 146/292 (50%), Gaps = 2/292 (0%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+P +N +I+ LCK + + E++ +MKK D+ +Y+ L+ G NL VY+
Sbjct: 230 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYK 289
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
EM ++G PDVV Y M+N + A R +E +EL++ ME C+ + LI GL
Sbjct: 290 EMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENA 348
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ EA+ + ++ ++ TY +V C + +N A +++E +T Y
Sbjct: 349 KVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYS 408
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ L + GR +E V +M+ K G +P V+ F ++++ A+R + M +
Sbjct: 409 SMINGLCREGRLDEVAGVLDQMT-KHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVS 467
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+G P + Y+TLIN L ++ +A +EML G +P +S L L
Sbjct: 468 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGL 519
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 151/287 (52%), Gaps = 5/287 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ + LI++L K+ ++ A ++FD+M +R PD+ Y IL++G+ ++ ++L+
Sbjct: 154 GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNA 213
Query: 65 NEVY-REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+E++ R +K P++ SY +MIN C ++DE+ E++ M+ + + TLI+
Sbjct: 214 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH 273
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL L A + + + + G P+ YN ++ Y + RI + + M K G
Sbjct: 274 GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-R 332
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+Y+I++ L + + +EA S+++ + K ++ TY ++V C N ++ A+ I
Sbjct: 333 TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSM-TYGVLVHGLCKNGYLNKALSI 391
Query: 244 WDEMK-ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+E + RG L YS++IN LC E +LD+ +M G +P
Sbjct: 392 LEEAENGRGDLDTF-AYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 437
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 147/289 (50%), Gaps = 2/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G + + +N LI L ++ V+ A +++ + ++ D +Y +L+ G +
Sbjct: 326 MEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGY 384
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E ++ + D +Y MIN C R DE + +M CKP+P++
Sbjct: 385 LNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNA 444
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ING +L +AL+FFG +G P TYN ++ + R ++AY ++ EM + G
Sbjct: 445 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKG 504
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN TY ++++ L + + + A +++ + K G +P V + I++ C + +V+ A
Sbjct: 505 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKPDVKMHNIIIHGLCSSGKVEDA 563
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++++ EMK R +P + ++TL+ + A K + +L G++P
Sbjct: 564 LQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQP 612
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 153/316 (48%), Gaps = 4/316 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ GL L +N LI C+ + ++A+E+ + M + F PD+ SY L+ + +
Sbjct: 116 ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYM 175
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELF-REMEATNCKPSPHIFCT 120
+++ EM + G PDV Y I+I+ A E++ R ++ + P+ +
Sbjct: 176 SDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNV 235
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL + E+ + + + KK + TY+ ++ C S ++ A R+ EM + G
Sbjct: 236 MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 295
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ Y+ +L+ ++AGR EE ++K M K G TV +Y I++R NA+VD A
Sbjct: 296 VSPDVVVYNTMLNGYLRAGRIEECLELWKVM-EKEGCR-TVVSYNILIRGLFENAKVDEA 353
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ IW+ + + Y L++ LC L+ A +E + +S++
Sbjct: 354 ISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMING 413
Query: 301 LRDEG-MEETAVVLAQ 315
L EG ++E A VL Q
Sbjct: 414 LCREGRLDEVAGVLDQ 429
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 142/288 (49%), Gaps = 1/288 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ LCK+ ++ +A + ++ + R D D +Y+ ++ G ++ L + V +M
Sbjct: 372 YGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMT 431
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+ +IN A + ++A+ F M + C P+ + TLINGL +R S
Sbjct: 432 KHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFS 491
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + ++G++P TY+ ++ C +++ A + + + G P+ + ++I++
Sbjct: 492 EAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIII 551
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L +G+ E+A ++ M ++ P + T+ ++ F + A +IWD + G+
Sbjct: 552 HGLCSSGKVEDALQLYSEMKQR-NCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGL 610
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
P + Y+ + LC ++ DA + + +D G+ P ++ L Q
Sbjct: 611 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 140/304 (46%), Gaps = 4/304 (1%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+ D++ + VF + KR FDP + ++ Q +++ R + G
Sbjct: 29 IFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYAKNSMPDQ----ALDIFQRMHEIFG 84
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+P + SY ++NA + ++DEA F E P+ + LI +K+ +A
Sbjct: 85 CQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAK 144
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ +GF P+ +Y ++ + + ++DA ++ DEM + G+ P+ Y+I++
Sbjct: 145 ELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGF 204
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K G A +++R+ + P P + +Y +++ C + D + IW MK
Sbjct: 205 FKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQD 264
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
++ YSTLI+ LC LD A + ++EM + G+ P +++ + G E + L +
Sbjct: 265 LYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWK 324
Query: 316 KIDK 319
++K
Sbjct: 325 VMEK 328
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 103/206 (50%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ L K+ A + +M ++ + P++ +Y++L+ G Q K L ++ +
Sbjct: 477 YNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 536
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF+PDV + I+I+ CS+ + ++A++L+ EM+ NC P+ TL+ G +
Sbjct: 537 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFE 596
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + + G +P+ +YN + C RI+DA +++ G+ P T++I++
Sbjct: 597 RASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTE 218
+ E V M PG +
Sbjct: 657 QGYLALKGYMEPVFVPASMKGNPGMQ 682
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 109/231 (47%), Gaps = 1/231 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K N +I+ ++ +E A F M + P + +Y L+ G + +
Sbjct: 430 MTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAER 489
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EM G++P++++Y +++N C K+ D A+ L+ + KP +
Sbjct: 490 FSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNI 549
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL S ++ +ALQ + + K+R P T+N ++ + A ++ D + + G
Sbjct: 550 IIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYG 609
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
+ P+ +Y+I L L R +A F + G PT T+ I+V+ +
Sbjct: 610 LQPDIISYNITLKGLCSCHRISDAVG-FLNDAVDRGVLPTAITWNILVQGY 659
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 141/290 (48%), Gaps = 1/290 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+R++ + ++ EV +MK PD Y ++++ +G+ L E Y M
Sbjct: 424 FSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRML 483
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G EPDVV++ +I+ H +D A ELF EM+ P P + +IN LG +++
Sbjct: 484 SEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWD 543
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E G+ + +G P TY +V Y S R NDA ++ M+ G+ P+ Y+ ++
Sbjct: 544 EVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALI 603
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + G +E+A + ++ M G P++ ++ F + + A I MK V
Sbjct: 604 NAFAQRGLSEQAVNAYRVMISD-GLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDV 662
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
P + Y+TL+ +L DK D ++EM+ G P G+ + L+ ALR
Sbjct: 663 KPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALR 712
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 149/307 (48%), Gaps = 1/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + F +I L E A+ +F++MK+ P IK++ LL+G+ ++ +L
Sbjct: 311 GLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEA 370
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM+ G PD +YG++++A+ + R++ A L ++MEA N +P+ IF ++
Sbjct: 371 ESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILAS 430
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ + + K +P+ YN ++ + ++ A D M GI P+
Sbjct: 431 YRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPD 490
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ K G + A +F+ M + G P +TY I++ + D +
Sbjct: 491 VVTWNTLIDCHRKHGYHDRAAELFEEMQER-GYLPCPTTYNIMINSLGEQEKWDEVKILL 549
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+M+++G+LP + Y+TL++ H + +DA + M G++P +++ L A
Sbjct: 550 GKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQR 609
Query: 305 GMEETAV 311
G+ E AV
Sbjct: 610 GLSEQAV 616
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 140/307 (45%), Gaps = 3/307 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK--NLLSMNEVYRE 70
+N LI ++ +E+A + +M++ F D +Y+++++ + ++ + ++Y E
Sbjct: 212 YNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEE 271
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
++ D E D + +I A + A+ ++A+ P F +I+ LG+ R
Sbjct: 272 IESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGR 331
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
EA F + K+ G +P +NA++ Y + +A ++ EM K G+ P+ TY +
Sbjct: 332 TEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGL 391
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ GR E A + K+M + +P + ++ + + + EMK
Sbjct: 392 LVDAYANVGRWESARHLLKQMEAR-NVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNS 450
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
V P H Y+ +I++ + LD A + + ML GI P ++ L R G + A
Sbjct: 451 NVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRA 510
Query: 311 VVLAQKI 317
L +++
Sbjct: 511 AELFEEM 517
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 109/207 (52%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ ++ +N LID K + +RA E+F++M++R + P +Y I++ G+Q+ +
Sbjct: 486 GIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEV 545
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M+ G P+VV+Y +++ + + R+++A++ M++ KPS ++ LIN
Sbjct: 546 KILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINA 605
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+A+ + G P N+++ A+ R +A+ ++ M++ + P+
Sbjct: 606 FAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPD 665
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRM 211
TY ++ LI+ + ++ +V++ M
Sbjct: 666 VVTYTTLMKALIRVDKFDKVPAVYEEM 692
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 41/244 (16%)
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
++ LI+ LG ++L EA F S+K+ P TYNA++GA + + A +M M
Sbjct: 181 LYSILIHALGRSEKLYEA---FILSQKQTLTPL--TYNALIGACARNNDLEKALNLMSRM 235
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRT---------EEAYS--------------------- 206
R+ G + Y +++ L + + EE S
Sbjct: 236 RQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAG 295
Query: 207 ------VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
F M + G P ST+ V+ + + + A I++EMK G+ P + ++
Sbjct: 296 DPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFN 355
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
L+ + L +A EM G+ P + L A + G E+A L ++++
Sbjct: 356 ALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEAR 415
Query: 321 RKTP 324
P
Sbjct: 416 NVQP 419
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 52/113 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK +N LI+ + E+A + M P + + L+ +G+ +
Sbjct: 587 MKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRR 646
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKP 113
+ + + MK++ +PDVV+Y ++ A ++D+ ++ EM + C P
Sbjct: 647 DIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTP 699
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 140/299 (46%), Gaps = 4/299 (1%)
Query: 29 AQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
A +VF + + P + ILL + E + + G PDV + IN
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAF-HVVCKGVSPDVYLFTTAIN 260
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
A C + +EA+ELF +ME P+ + T+I+GLG R EA F + +RG EP
Sbjct: 261 AFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEP 320
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
TY+ +V + RI DAY ++ EM + G PN Y+ ++ LI+AG +A +
Sbjct: 321 TLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIK 380
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
M K G T STY +++ +C + Q D+A R+ EM + G ++++I LC
Sbjct: 381 DLMVSK-GLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCS 439
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVD 327
D A ++ EML + P G L + L L G AV L K L K LVD
Sbjct: 440 HHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKF--LNKGFLVD 496
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 13/265 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N LI C ++ ++ A D+M K+ PD +Y+IL+ G LL+M
Sbjct: 527 GFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRG------LLNM 580
Query: 65 NEV------YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
N+V + + K +G PDV +Y +MI+ C A+R +E +LF EM + N +P+ ++
Sbjct: 581 NKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVY 640
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
LI RLS AL+ K +G P + TY +++ R+ +A +++EMR
Sbjct: 641 NHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRM 700
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ PN Y ++ K G+ + + + M K P TY +++ + + V
Sbjct: 701 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK-NVHPNKITYTVMIGGYARDGNVT 759
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLI 263
A R+ EM+ +G++P Y I
Sbjct: 760 EASRLLHEMREKGIVPDSITYKEFI 784
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 1/250 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LI LCK +A E++ K + F D K+ LL G + L + +E+ G
Sbjct: 468 LISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRG 527
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F D VSY +I+ C K+ DEA EM KP + + LI GL + ++ EA+
Sbjct: 528 FVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAI 587
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
QF+G K+ G P+ TY+ ++ C + R + ++ DEM + PNT Y+ ++
Sbjct: 588 QFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAY 647
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
++GR A + + M K G P +TY +++ ++V+ A + +EM+ G+ P
Sbjct: 648 CRSGRLSMALELREDMKHK-GISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPN 706
Query: 256 MHMYSTLINS 265
+ Y+ LI+
Sbjct: 707 VFHYTALIDG 716
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 147/300 (49%), Gaps = 1/300 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LID+L ++ + +A E+ D M + +Y L++G+ +
Sbjct: 348 MTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQ 407
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EM GF + S+ +I CS +D A+ EM N P + T
Sbjct: 408 ADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTT 467
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + S+A++ + + +GF + T NA++ C + ++ + +R+ E+ G
Sbjct: 468 LISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRG 527
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ +Y+ ++ + +EA+ M +K G +P TY I++R +V+ A
Sbjct: 528 FVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKK-GLKPDNYTYSILIRGLLNMNKVEEA 586
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ W + K G++P ++ YS +I+ C ++ ++ K F EM+ ++P ++++L A
Sbjct: 587 IQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGA 646
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 144/341 (42%), Gaps = 34/341 (9%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ F I+ CK VE A E+F KM++ P++ +Y +++G G
Sbjct: 247 GVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEA 306
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+M + G EP +++Y I++ AKR +A + +EM P+ ++ LI+
Sbjct: 307 FMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDS 366
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L L++A++ +G + TYN ++ YC S + + A R++ EM G N
Sbjct: 367 LIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVN 426
Query: 185 TRTYDIVL-----HHLIKAGRTEEAYSVFKRMSRKPGTEPTV------------------ 221
++ V+ HH+ + + + MS G T+
Sbjct: 427 QGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWL 486
Query: 222 -----------STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
T ++ C +++ RI E+ RG + Y+TLI+ C
Sbjct: 487 KFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNK 546
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
KLD+A + EM+ G++P +S L + L + E A+
Sbjct: 547 KLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAI 587
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 112/246 (45%), Gaps = 1/246 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GLK + ++ LI L VE A + + K+ PD+ +Y+++++G + +
Sbjct: 558 MVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAER 617
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ EM + +P+ V Y +I A+C + R A+EL +M+ P+ + +
Sbjct: 618 TEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTS 677
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G+ R+ EA + + G EP Y A++ Y ++ ++ EM
Sbjct: 678 LIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 737
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY +++ + G EA + M R+ G P TY+ + + V A
Sbjct: 738 VHPNKITYTVMIGGYARDGNVTEASRLLHEM-REKGIVPDSITYKEFIYGYLKQGGVLQA 796
Query: 241 MRIWDE 246
+ DE
Sbjct: 797 FKGSDE 802
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 153/314 (48%), Gaps = 3/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID C+ ++ A E+ +KM+ +I + ++ G + + E +RE +
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKR 308
Query: 73 DDGFEP--DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
E + V+Y ++ A A+ELF E + P ++ T+I+GL R
Sbjct: 309 TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L +A K+ GF+ + YN ++ +C R+++AY ++ EM++ GI P+ TY+
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L KAG + +M G +P+V T+ +V +C ++D A+RI M
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDD-GCQPSVITFGTLVHGYCKVGKIDEALRILRSMDES 487
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G+ P +Y+TLI+ LC +D A + F EM + + F+ L + LRD+ M E A
Sbjct: 488 GIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547
Query: 311 VVLAQKIDKLRKTP 324
L ++ + R P
Sbjct: 548 FELMDQMREERCFP 561
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 6/251 (2%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKD-DGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
D+ ++ +L + +++ M +Y M+ PDVV+YGI++N C A R +A+ +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194
Query: 103 FREMEATNCKPSPHIFC--TLINGLGSEKRLSEALQFFGQ--SKKRGFEPEAPTYNAVVG 158
M + P + T+++GL R+ EAL F Q S G P TYN ++
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK-RMSRKPGT 217
A+C I+ AY ++++M G+ N T + ++ L +AGRT A F+ + + P
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+ TY +V + V MAM ++ E + G P MY T+I+ L +L+DAC
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 278 YFQEMLDIGIR 288
M + G +
Sbjct: 375 MASSMKEAGFK 385
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 106/202 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + +N LI C+ + + A E+ +MK+ PD+ +Y LL G + +
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++E+ +M DDG +P V+++G +++ +C + DEA+ + R M+ + P+ I+ T
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + A++ F + K++ T+NA++ A+ +MD+MR+
Sbjct: 499 LIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREER 558
Query: 181 IGPNTRTYDIVLHHLIKAGRTE 202
P+ T D+++ L G T+
Sbjct: 559 CFPDYVTVDVLMEWLPVIGETD 580
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 153/314 (48%), Gaps = 3/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID C+ ++ A E+ +KM+ +I + ++ G + + E +RE +
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKR 308
Query: 73 DDGFEP--DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
E + V+Y ++ A A+ELF E + P ++ T+I+GL R
Sbjct: 309 TVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGR 368
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L +A K+ GF+ + YN ++ +C R+++AY ++ EM++ GI P+ TY+
Sbjct: 369 LEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNT 428
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L KAG + +M G +P+V T+ +V +C ++D A+RI M
Sbjct: 429 LLSGSCKAGDFAAVDELLGKMIDD-GCQPSVITFGTLVHGYCKVGKIDEALRILRSMDES 487
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G+ P +Y+TLI+ LC +D A + F EM + + F+ L + LRD+ M E A
Sbjct: 488 GIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKA 547
Query: 311 VVLAQKIDKLRKTP 324
L ++ + R P
Sbjct: 548 FELMDQMREERCFP 561
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 6/251 (2%)
Query: 44 DIKSYTILLEGWGQQKNLLSMNEVYREMKD-DGFEPDVVSYGIMINAHCSAKRYDEAVEL 102
D+ ++ +L + +++ M +Y M+ PDVV+YGI++N C A R +A+ +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194
Query: 103 FREMEATNCKPSPHIFC--TLINGLGSEKRLSEALQFFGQ--SKKRGFEPEAPTYNAVVG 158
M + P + T+++GL R+ EAL F Q S G P TYN ++
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK-RMSRKPGT 217
A+C I+ AY ++++M G+ N T + ++ L +AGRT A F+ + + P
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEG 314
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+ TY +V + V MAM ++ E + G P MY T+I+ L +L+DAC
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 278 YFQEMLDIGIR 288
M + G +
Sbjct: 375 MASSMKEAGFK 385
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 103/195 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + +N LI C+ + + A E+ +MK+ PD+ +Y LL G + +
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++E+ +M DDG +P V+++G +++ +C + DEA+ + R M+ + P+ I+ T
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + A++ F + K++ T+NA++ A+ +MD+MR+
Sbjct: 499 LIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREER 558
Query: 181 IGPNTRTYDIVLHHL 195
P+ T D+++ L
Sbjct: 559 CFPDYVTVDVLMEWL 573
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 148/305 (48%), Gaps = 1/305 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI LC + ++ A VF KM + P + +YT+LL+G + + + + EM
Sbjct: 164 YTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV 223
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P+VV+Y +I C R+D+ +L +ME P + +++GL ++
Sbjct: 224 NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVG 283
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ ++ +G E TYNA++ YC + A ++ M++ + P +T++ V+
Sbjct: 284 HGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVI 343
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H G+ +A + +M+ G P T+ ++ C + +A+R+ D M+ GV
Sbjct: 344 HGFCCGGKVHKAMAFLTQMA-GAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGV 402
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
LP Y+ I++LC E +L++A F + GI+ ++++L G ++A
Sbjct: 403 LPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFG 462
Query: 313 LAQKI 317
L +K+
Sbjct: 463 LMEKM 467
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 153/342 (44%), Gaps = 13/342 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G +N LI+ CK + A+ +M++ PD +Y L+ G +
Sbjct: 81 MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140
Query: 61 LLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L + ++ +M + G D SY I+I C+A R D+A +F +M C+P H +
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYT 200
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L++GL +R+ EA G+ +G P TYNA++G C R +D +++++M
Sbjct: 201 VLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQ 260
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P+ TY V+H L K G+ V K G V TY ++ +C +
Sbjct: 261 RHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK-GVALEVLTYNALINGYCKGGDMKA 319
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-- 297
A+ + MK V P + ++ +I+ C K+ A + +M G+ P F++L
Sbjct: 320 ALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLIS 379
Query: 298 --------KQALR-DEGMEETAVVLAQKIDKLRKTPLVDRGQ 330
K ALR + MEE V+ ++ + L D GQ
Sbjct: 380 GQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQ 421
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 146/311 (46%), Gaps = 9/311 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ E+ +N LI+ CK ++ A +V MK+ R +P ++++ ++ G+ +
Sbjct: 296 GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKA 355
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+M G P+ V++ +I+ CS A+ L ME P + I+
Sbjct: 356 MAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDA 415
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E +L EA F +G + Y ++V YC I+ A+ +M++M P+
Sbjct: 416 LCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPD 475
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ L K R + A + +M +K G EPT T+ I+++ ++ + A +++
Sbjct: 476 VHTYNTLIDGLCKVKRLDRAIDLLDKM-KKQGIEPTTCTFNILIKQMLWDKKHADAAKMY 534
Query: 245 DEMKARGVLPVMHMYSTLINS-----LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
++M + G P Y+ I++ E+ +D A EM + G+ P + ++ + +
Sbjct: 535 EQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA---VVEMHEAGVFPDVETYNAIIK 591
Query: 300 ALRDEGMEETA 310
A D G++E A
Sbjct: 592 AYVDAGLKEKA 602
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 1/274 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL FN LI C + A + D M++ PD ++Y I ++ +
Sbjct: 362 MAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQ 421
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + ++ + G + V Y +++ +C D A L +M + NC P H + T
Sbjct: 422 LEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNT 481
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL KRL A+ + KK+G EP T+N ++ W + DA +M ++M G
Sbjct: 482 LIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSG 541
Query: 181 IGPNTRTYDIVLHHLIKAGRT-EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P+ +TY + + G T EE + + G P V TY +++ + +
Sbjct: 542 CKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEK 601
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
A +M + + P YS L+N +C++D D
Sbjct: 602 AFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSD 635
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 141/298 (47%), Gaps = 4/298 (1%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
++K +++ PD + +++ LCK V +V + + ++ +Y L+ G+ +
Sbjct: 254 LEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCK 313
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
++ + +V + MK + P V ++ +I+ C + +A+ +M P+
Sbjct: 314 GGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVT 373
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
F +LI+G S AL+ ++ G P+ TY + A C ++ +A+ + +
Sbjct: 374 FNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLP 433
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
GI + Y ++H + G + A+ + ++M+ + P V TY ++ C ++
Sbjct: 434 MKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASE-NCMPDVHTYNTLIDGLCKVKRL 492
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
D A+ + D+MK +G+ P ++ LI + + K DA K +++M+ G +P Q ++
Sbjct: 493 DRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYT 550
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%)
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
RL+ L FG K G P TYN ++ A+C + DA + MR+ G+ P+T TY+
Sbjct: 70 RLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYN 129
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ L +AG A +F +M R+ G +Y I+++ C ++D A R++ +M
Sbjct: 130 CLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSR 189
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
P +H Y+ L++ LC ++ +A EM++ G+ P ++ L L EG +
Sbjct: 190 GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDD 249
Query: 310 AVVLAQKIDKLRKTP 324
L +K++ R +P
Sbjct: 250 VTKLLEKMEIQRHSP 264
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 122/293 (41%), Gaps = 7/293 (2%)
Query: 40 RFDP-DIKSYTILLEGWGQQKN----LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAK 94
R DP D++S+ L + + + L + + M G P+ +Y +INAHC
Sbjct: 45 RLDPSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLA 104
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR-GFEPEAPTY 153
+A M P + L+ GL L+ A F Q +R G + +Y
Sbjct: 105 LLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSY 164
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
++ C + RI+DA R+ +M + P TY ++L L K R EA ++ M
Sbjct: 165 TILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVN 224
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
K G P V TY ++ C + D ++ ++M+ + P Y+ +++ LC K+
Sbjct: 225 K-GVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVG 283
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
K E + G+ ++ L G + A+ + Q + + R P V
Sbjct: 284 HGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGV 336
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 135/342 (39%), Gaps = 64/342 (18%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDP-------------- 43
M+K + +PD +N LID LCK + ++RA ++ DKMKK+ +P
Sbjct: 464 MEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLW 523
Query: 44 ---------------------DIKSYTI-----LLEGWGQQKNLLSMNEVYREMKDDGFE 77
D ++YT+ EG +++N+ + EM + G
Sbjct: 524 DKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENI---DMAVVEMHEAGVF 580
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL-- 135
PDV +Y +I A+ A ++A +M + P + L+N + K S+A
Sbjct: 581 PDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYM-CNKDDSDAFDN 639
Query: 136 -------------QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ F Q + P TY A++ C R+ + ++ +M+ I
Sbjct: 640 EKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSIL 699
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+ D +L EA F+ M+ + +P + + +++ C + MA+
Sbjct: 700 LDEDMSDYLLGCYCNLEMYREACEQFRSMAHQS-FQPGLKSCCLLLSGLCDSGDHGMAVS 758
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
I+ +M G ++ LI+ L HE AC ++D
Sbjct: 759 IFSDMLGLGYNYDEVVWKLLIDCL-HEKGHAGACLEMLSVMD 799
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 64/163 (39%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
V QE+F++M + P I +Y LL G Q L + + +M+ + D
Sbjct: 648 VRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDY 707
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++ +C+ + Y EA E FR M + +P C L++GL A+ F G
Sbjct: 708 LLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLG 767
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ + + ++ M+ M +TRTY
Sbjct: 768 YNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTY 810
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/244 (18%), Positives = 94/244 (38%), Gaps = 15/244 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL-------- 52
M + G+ ++ +N +I + E+A KM DPD +Y+ILL
Sbjct: 574 MHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDD 633
Query: 53 ------EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
E + ++ ++ E++ +M + P + +Y ++ C+ R +E L +M
Sbjct: 634 SDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKM 693
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ + + L+ + + EA + F + F+P + ++ C S
Sbjct: 694 QGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDH 753
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
A + +M G + + +++ L + G + M K T TY
Sbjct: 754 GMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVAST-RTYAS 812
Query: 227 VVRM 230
+VR+
Sbjct: 813 LVRL 816
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 141/302 (46%), Gaps = 20/302 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + ++ LID LCKS A+E+F+ M + P+ +Y LL G+ + N
Sbjct: 348 MSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGN 407
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ MN V M +G P + I I A+C R DEA F +M+ P + T
Sbjct: 408 LVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTT 467
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+GL RL +A+ F Q G P+ T+N ++ + + A + EM G
Sbjct: 468 VIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRG 527
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN T++ ++ L K G+ EA +F M R G +P V +Y ++ + +V
Sbjct: 528 IPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA-GAKPNVVSYNTMIHGYFIAGEVGEV 586
Query: 241 MRIWDEMKARGVLPVMHMYS-------------------TLINSLCHEDKLDDACKYFQE 281
M++ D+M G+ P ++ TLI+S C + +++D F+E
Sbjct: 587 MKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFRE 646
Query: 282 ML 283
ML
Sbjct: 647 ML 648
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 142/285 (49%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + N +ID LCK + +++A+ V +M P+ +Y L+ G+
Sbjct: 282 GIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEA 341
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +EM DG P+VV+Y ++I+ C + + EA E+F M + KP+ + +L++G
Sbjct: 342 VRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHG 401
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+E L + + G P +N + AYC R+++A ++M++ G P+
Sbjct: 402 YATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPD 461
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y V+ L K GR ++A S F +M G P + T+ ++ F + + + A ++
Sbjct: 462 IVAYTTVIDGLCKIGRLDDAMSRFCQMI-DDGLSPDIITFNTLIHGFALHGKWEKAEELF 520
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM RG+ P ++ ++++I+ L E K+ +A K F M G +P
Sbjct: 521 YEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKP 565
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 150/312 (48%), Gaps = 3/312 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR--RFDPDIKSYTILLEGWGQQ 58
M + G ++ + L+ LC + E A E+ M + P++ SYT ++ G+ ++
Sbjct: 206 MPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKE 265
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ ++ +M D G P+VV+ +I+ C + D+A + ++M + P+ +
Sbjct: 266 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 325
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI+G S + +EA++ + + G P TY+ ++ C S +A + + M +
Sbjct: 326 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQ 385
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G PN TY +LH G + +V K + + G P + I + +C ++D
Sbjct: 386 SGQKPNASTYGSLLHGYATEGNLVDMNNV-KDLMVQNGMRPGRHVFNIEIYAYCKCGRLD 444
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +++M+ +G +P + Y+T+I+ LC +LDDA F +M+D G+ P F+ L
Sbjct: 445 EASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLI 504
Query: 299 QALRDEGMEETA 310
G E A
Sbjct: 505 HGFALHGKWEKA 516
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 134/301 (44%), Gaps = 7/301 (2%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M + G K+ PD F LI C + + ++ K ++T LL
Sbjct: 132 MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCA 191
Query: 58 QKNLL-SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPS 114
+K +MN V R M + G PDV SY ++ C+ K+ +EA EL M + NC P+
Sbjct: 192 EKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPN 251
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ T+I+G E + +A F + G P T N+V+ C ++ A ++
Sbjct: 252 VVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 311
Query: 175 EMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
+M I PN TY+ ++H + +G+ EA + K MSR G P V TY +++ C +
Sbjct: 312 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRD-GQRPNVVTYSMLIDCLCKS 370
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
A I++ M G P Y +L++ E L D M+ G+RP +F
Sbjct: 371 GLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVF 430
Query: 295 S 295
+
Sbjct: 431 N 431
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 140/293 (47%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I K V +A +F KM P++ + +++G + + + V ++M
Sbjct: 255 YTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI 314
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D+ P+ +Y +I+ + S+ ++ EAV + +EM +P+ + LI+ L +
Sbjct: 315 DEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHA 374
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + G +P A TY +++ Y + D + D M + G+ P ++I +
Sbjct: 375 EAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEI 434
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K GR +EA F +M ++ G P + Y V+ C ++D AM + +M G+
Sbjct: 435 YAYCKCGRLDEASLTFNKMQQQ-GFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 493
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + ++TLI+ K + A + F EM+D GI P F+++ L EG
Sbjct: 494 SPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEG 546
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 5/233 (2%)
Query: 99 AVELFREMEATNCK---PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
AV +F M K P F LI+ L+ GQ K G +A T+
Sbjct: 125 AVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTP 184
Query: 156 VVGAYCWSMRINDAYRM-MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ C R +DA + + M + G P+ +Y +L L + EEA + M+
Sbjct: 185 LLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAED 244
Query: 215 P-GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
P V +Y V+ F V A ++ +M G+ P + +++I+ LC +D
Sbjct: 245 GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 304
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
A Q+M+D I P +++L G AV + +++ + + P V
Sbjct: 305 KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNV 357
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 163/352 (46%), Gaps = 52/352 (14%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K ++ FN LI LCK+ + A V ++M PD K++T L++G+ ++ N+
Sbjct: 188 GIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGA 247
Query: 65 NEVYREM---------------------------------------------------KD 73
V +M K+
Sbjct: 248 FRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKN 307
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G +PD +Y ++I++ C + EA+ L REME + C + + TLI+G K++ E
Sbjct: 308 KGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEE 367
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + F Q + +G + TYN ++ C S R+ +A ++MD+M G+ P+ TY+ +L
Sbjct: 368 AEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLT 427
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
+ + G ++A + + M+ G EP + TY ++ C +V++A R+ ++ +G++
Sbjct: 428 YFCREGDIQKAADIVQTMTSN-GCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMV 486
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
H Y+ +I +L + +A + F+EM + G P + + + L + G
Sbjct: 487 LTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSG 538
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 136/285 (47%), Gaps = 37/285 (12%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E+Y EMK+ G +PD +Y ++I++ C + EA+ L REME + C + + TLI+G
Sbjct: 300 ELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGF 359
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
K++ EA + F Q + +G + TYN ++ C S R+ +A ++MD+M G+ P+
Sbjct: 360 CKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDK 419
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ +L + + G ++A + + M+ G EP + TY ++ C +V++A R+
Sbjct: 420 FTYNSMLTYFCREGDIQKAADIVQTMTSN-GCEPDIVTYGTLIGGLCKAGRVEVASRLLR 478
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM----------------------- 282
++ +G++ H Y+ +I +L + +A + F+EM
Sbjct: 479 SIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSG 538
Query: 283 -------------LDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
++ G P F L + L ME+T + L
Sbjct: 539 GPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLV 583
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 5/261 (1%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PD +N LID+LC ++ A + +M+ ++ +Y L++G+ + K + E+
Sbjct: 312 PDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEI 371
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ +M+ G + V+Y +I+ C ++R EA +L +M KP + +++
Sbjct: 372 FDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCR 431
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
E + +A G EP+ TY ++G C + R+ A R++ ++ G+
Sbjct: 432 EGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHA 491
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ-VDMAMRIWDE 246
Y+ V+ L K RT+EA +F+ M K G P TY+IV R + + A+ E
Sbjct: 492 YNPVIQALFKRKRTKEAMRLFREMEEK-GNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIE 550
Query: 247 MKARGVLPVMHMYSTLINSLC 267
M +G LP + L LC
Sbjct: 551 MIEKGFLPEFSSFYMLAEGLC 571
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 17/331 (5%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+FGL + +N L++ L ++ + V M + PD+ ++ IL++ + +
Sbjct: 151 EFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIR 210
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC-------KPSP 115
V EM G PD ++ ++ D A + +M C
Sbjct: 211 PAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLV 270
Query: 116 HIFC---------TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
H FC + I+ + +E + + A++ + + K +G +P+ TYN ++ + C+ ++
Sbjct: 271 HGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKL 330
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+A ++ EM G N TY+ ++ K + EEA +F +M + + +V TY
Sbjct: 331 QEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSV-TYNT 389
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ C + +V A ++ D+M G+ P Y++++ C E + A Q M G
Sbjct: 390 LIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNG 449
Query: 287 IRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
P + L L G E A L + I
Sbjct: 450 CEPDIVTYGTLIGGLCKAGRVEVASRLLRSI 480
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 2/246 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G + + +N LID CK++ +E A+E+FD+M+ + + +Y L++G + +
Sbjct: 340 MEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRR 399
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +G +PD +Y M+ C +A ++ + M + C+P + T
Sbjct: 400 VQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGT 459
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL R+ A + + +G YN V+ A R +A R+ EM + G
Sbjct: 460 LIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKG 519
Query: 181 IGPNTRTYDIVLHHLIKAGR-TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
P+ TY IV L +G EA M K G P S++ ++ C + D
Sbjct: 520 NTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEK-GFLPEFSSFYMLAEGLCSLSMEDT 578
Query: 240 AMRIWD 245
+++ D
Sbjct: 579 LIKLVD 584
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 130/286 (45%), Gaps = 19/286 (6%)
Query: 15 RLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
+L+DTL + A + K+ F P+ Y +L G+ + SM ++ +EMK
Sbjct: 56 QLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKG 115
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-NCKPSPHIFCTLINGLGSEKRLS 132
+ D I I+++ + Y+E + + ME ++ L+N L +L
Sbjct: 116 LDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLK 175
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+G +P+ T+N ++ A C + +I A +M+EM G+ P+ +T+ ++
Sbjct: 176 LVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLM 235
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD-------------- 238
I+ G + A+ V ++M G T T ++V FC +++
Sbjct: 236 QGFIEEGNMDGAFRVKEQM-LDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGK 294
Query: 239 --MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
MA+ +++EMK +G P Y+ LI+SLC+ KL +A +EM
Sbjct: 295 HTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREM 340
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/165 (19%), Positives = 65/165 (39%)
Query: 141 SKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
SK+ F P + Y ++ N ++ EM+ + I + K
Sbjct: 78 SKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFEL 137
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
EE + + M + G Y ++ + ++ + + M ++G+ P + ++
Sbjct: 138 YEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFN 197
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LI +LC ++ A +EM G+ P + F+ L Q +EG
Sbjct: 198 ILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEG 242
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 2/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + LID LCK+R A + +M + +PD+ +Y L+ G
Sbjct: 71 MADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANR 130
Query: 61 LLSMNEVYRE-MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ V +E M + G PDVV+Y I+ C A + D+ +E+ EM+ P FC
Sbjct: 131 MDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFC 190
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
++I+GL R+ +A Q F +RG P++ TY+ ++ + R++ +++ M K
Sbjct: 191 SIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKS 250
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G + TY ++H LI+AG E A +++ + + G V T+ + C + + +
Sbjct: 251 GHYALSATYAPLIHALIRAGDIESASWAYEQ-AMEAGCVMEVYTHNAFIGALCRSGKFPL 309
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
A I M G LP + Y+ +I+ LC +DDA K ++MLD G P +F N
Sbjct: 310 AKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFN 366
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 139/275 (50%), Gaps = 2/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI LCK+R A E+ M +D + +YT L++G + +L + + ++M
Sbjct: 13 YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G P+VV+Y +I+ C A+R +A++ + M + C+P + +LI+GL R+
Sbjct: 73 DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132
Query: 133 EA-LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A L + G P+ TYN + C + +++ M++EM + GI P+ T+ +
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSI 192
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L KA R ++A+ VFK M + G P TY I++ ++D + + M G
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLER-GCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+ Y+ LI++L ++ A +++ ++ G
Sbjct: 252 HYALSATYAPLIHALIRAGDIESASWAYEQAMEAG 286
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 2/276 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M R F D Y L+ G + + E+ M +G++ VV+Y +I+ C +
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
D A L ++M C P+ + LI+GL +R +A+Q + + G EP+ TYN+
Sbjct: 61 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120
Query: 156 VVGAYCWSMRINDAYRMMDE-MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ C + R++DA ++ E M + G P+ TY+ + L KAG+ ++ + + M R
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P V T+ ++ C ++D A +++ M RG +P YS ++++L ++LD
Sbjct: 181 -GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDT 239
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ + M+ G ++ L AL G E+A
Sbjct: 240 VEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESA 275
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 135/281 (48%), Gaps = 4/281 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD +N I LCK+ +++ E+ ++M + PD+ ++ ++ G + + +
Sbjct: 148 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQ 207
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V++ M + G PD ++Y IM++ A R D E+ M + + LI+ L
Sbjct: 208 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALI 267
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ A + Q+ + G E T+NA +GA C S + A ++ M + G PN
Sbjct: 268 RAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLL 327
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
+Y+ V+ L K+G ++A+ + ++M +P V + ++ FC ++ A ++ E
Sbjct: 328 SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKE 387
Query: 247 MKARGV-LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
MKA+ + +P + Y+T+I+ L A +EM +G
Sbjct: 388 MKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 159/309 (51%), Gaps = 1/309 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ G+ + +N LI L ++ A+E+F +MK+ DPD +Y ++L+ G+ +
Sbjct: 61 ENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRI 120
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
M ++ EM + G++ V+Y +I+ +K DEA+ L+ ++ + P+P + L
Sbjct: 121 EDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPL 180
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++GL + + +A F + + G EP YN ++ Y + + + M + G+
Sbjct: 181 LDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGM 240
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ ++Y +V+ L GR + S FK+++ G EP + TY +++ + +++ A+
Sbjct: 241 NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM-GLEPDLITYNLLIHGLGKSGRLEEAL 299
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++++M+ +G+ P ++ Y++LI L K +A K ++E+L G +P ++ L +
Sbjct: 300 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGY 359
Query: 302 RDEGMEETA 310
G E A
Sbjct: 360 SVSGSPENA 368
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K +N +I L KS+ ++ A ++ ++ F P +Y LL+G + N
Sbjct: 130 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 189
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + G EP+ Y I++N + A ++ ELF M P +
Sbjct: 190 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 249
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ RL++ L +F Q G EP+ TYN ++ S R+ +A + ++M K G
Sbjct: 250 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 309
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ +L KAG+ EA +++ + K G +P V TY ++R + + + A
Sbjct: 310 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAK-GWKPNVFTYNALIRGYSVSGSPENA 368
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSL 266
+ M G P Y L N +
Sbjct: 369 FAAYGRMIVGGCRPNSSTYMQLPNQM 394
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 139/290 (47%), Gaps = 1/290 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+I LCK + A E+ K + SY L+ G + + E++ EMK G
Sbjct: 40 IIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLG 99
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD +Y ++++A + R ++ +++ EM K + + T+I+GL K L EA+
Sbjct: 100 CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAI 159
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ Q GF P TY ++ I DA + DEM +CG PN Y+I+L+
Sbjct: 160 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 219
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
AG TE+ +F+ M + G P + +Y +V+ C + +++ + + ++ G+ P
Sbjct: 220 RIAGDTEKVCELFESMVEQ-GMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 278
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ Y+ LI+ L +L++A + +M GI P +++L L G
Sbjct: 279 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAG 328
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 144/311 (46%), Gaps = 1/311 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
+ L++ + K E++ E + + D + ++ + K L+ +E+ ++ ++
Sbjct: 3 HSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFEN 62
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G SY +I D A ELF EM+ C P + +++ +G R+ +
Sbjct: 63 LGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIED 122
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
L+ + +G++ TYN ++ S +++A + ++ G P TY +L
Sbjct: 123 MLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLD 182
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+K G E+A ++F M + G EP + Y I++ + + +++ M +G+
Sbjct: 183 GLLKDGNIEDAEALFDEM-LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMN 241
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y+ +I++LC + +L+D YF+++ D+G+ P ++ L L G E A+ L
Sbjct: 242 PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSL 301
Query: 314 AQKIDKLRKTP 324
++K P
Sbjct: 302 YNDMEKKGIAP 312
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 153/303 (50%), Gaps = 1/303 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ L +N +++ LCK + A +VFD+M++R +I +Y L+ G ++
Sbjct: 259 MQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
N+V +MK P++++Y +I+ CS + +A+ L R++++ PS +
Sbjct: 319 ANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNV 378
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + S A + + ++RG +P TY ++ + S + A ++ M + G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELG 438
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY +++H G+ EA +FK M K EP Y ++ +C A
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKM-LEPNEVIYNTMILGYCKEGSSYRA 497
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R++ +M+ + + P + YS LI LC E KL +A ++M+D GI P + + + +A
Sbjct: 498 LRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLISRA 557
Query: 301 LRD 303
D
Sbjct: 558 KTD 560
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 164/326 (50%), Gaps = 1/326 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +FG + + LID CK +E+A+++F +M K + +YT+L+ G +
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y +M++ G P++ +Y ++N C R +A ++F EM + + T
Sbjct: 249 KKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNT 308
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL E + +EA + Q K P TYN ++ +C ++ A + +++ G
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRG 368
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY++++ + G T A + K M + G +P+ TY I++ F + ++ A
Sbjct: 369 LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEER-GIKPSKVTYTILIDTFARSDNMETA 427
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M+ G++P +H YS LI+ C + ++++A + F+ M++ + P +++ +
Sbjct: 428 IQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILG 487
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
EG A+ L + +++ P V
Sbjct: 488 YCKEGSSYRALRLFRDMEEKELAPNV 513
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 155/310 (50%), Gaps = 2/310 (0%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
F +I C++ +E++ ++ ++++ F P++ YT L++G ++ + +++ EM
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G + +Y ++I+ + E++ +M+ P+ + + ++N L + R
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRT 284
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A + F + ++RG TYN ++G C M+ N+A ++MD+M+ I PN TY+ +
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTL 344
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ G+ +A S+ + + + G P++ TY ++V FC A ++ EM+ RG
Sbjct: 345 IDGFCSVGKLGKALSLCRDLKSR-GLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETA 310
+ P Y+ LI++ D ++ A + M ++G+ P +S L +G M E +
Sbjct: 404 IKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 311 VVLAQKIDKL 320
+ ++K+
Sbjct: 464 RLFKSMVEKM 473
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 157/319 (49%), Gaps = 2/319 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KFGL + LI L K+ ++ E+++KM++ P++ +Y ++ +
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGR 283
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+V+ EM++ G ++V+Y +I C + +EA ++ +M++ P+ + T
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNT 343
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G S +L +AL K RG P TYN +V +C + A +M+ EM + G
Sbjct: 344 LIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY I++ ++ E A + M + G P V TY +++ FC Q++ A
Sbjct: 404 IKPSKVTYTILIDTFARSDNMETAIQLRSSM-EELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ M + + P +Y+T+I C E A + F++M + + P +S L +
Sbjct: 463 SRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRV 522
Query: 301 L-RDEGMEETAVVLAQKID 318
L ++ ++E ++ + ID
Sbjct: 523 LCKERKLKEAEDLVEKMID 541
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 149/312 (47%), Gaps = 2/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L+ + S + F++ K + D+ S+ I+++G + + ++ E++
Sbjct: 132 FNNLLTFVVGSSSFNQWWCFFNE-SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELR 190
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF P+VV Y +I+ C ++A +LF EM + + LI+GL
Sbjct: 191 EFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKK 250
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + + + ++ G P TYN V+ C R DA+++ DEMR+ G+ N TY+ ++
Sbjct: 251 QGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLI 310
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L + + EA V +M + P + TY ++ FC ++ A+ + ++K+RG+
Sbjct: 311 GGLCREMKANEANKVMDQM-KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGL 369
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P + Y+ L++ C + A K +EM + GI+P ++ L ETA+
Sbjct: 370 SPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQ 429
Query: 313 LAQKIDKLRKTP 324
L +++L P
Sbjct: 430 LRSSMEELGLVP 441
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 114/276 (41%), Gaps = 35/276 (12%)
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
Y ++INA+ ++ D ++ F EM P + F L+ + ++ FF +SK
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 143 KR----------------------------------GFEPEAPTYNAVVGAYCWSMRIND 168
+ GF P Y ++ C I
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A + EM K G+ N TY +++H L K G ++ + ++++M ++ G P + TY V+
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKM-QEHGVFPNLYTYNCVM 275
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
C + + A +++DEM+ RGV + Y+TLI LC E K ++A K +M I
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P ++ L G A+ L + + +P
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSP 371
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 160/356 (44%), Gaps = 36/356 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + +N LI+ V +AQEV+D+M ++ DP++ +YT ++ ++
Sbjct: 177 MLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGC 236
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ MK+ G +P+ +Y ++++ HC + AV L++E+ + P+ IF T
Sbjct: 237 IGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTT 296
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G KR SEA F + + G P P YN+++ S +A + EM + G
Sbjct: 297 LIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLG 356
Query: 181 IGP-----------------------------------NTRTYDIVLHHLIKAGRTEEAY 205
+ P N Y+ ++ + G EEA
Sbjct: 357 LCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEAL 416
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ RM+ + G EP V +Y ++ ++ +AM I+ EM A+G+ P + Y+ LI+
Sbjct: 417 ATCTRMT-EVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 475
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
+D A + +EM++ GI P S L L E + AV + L+
Sbjct: 476 HAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLK 531
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 1/304 (0%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
LP N ++D L K+R A E+FD+M +R P + +Y L+ Q + EV+
Sbjct: 151 LPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWD 210
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M +P+VV+Y MI A C +A LF M+ +P+ + + L++G
Sbjct: 211 QMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRD 270
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ A+ + + K G P A + ++ +C + R ++A M EM + G+ P Y+
Sbjct: 271 DVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYN 330
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ ++G +EA ++++ M+R G P T IVVR C Q+ +A R ++
Sbjct: 331 SLMDGAFRSGNAQEALALYQEMTRL-GLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQE 389
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
GV Y+ LI+ C L++A M ++GI P +S+L G +
Sbjct: 390 DGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQI 449
Query: 310 AVVL 313
A+ +
Sbjct: 450 AMAI 453
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 36/320 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I LC+ + A+ +FD MK+ P+ +Y +L+ G Q+ ++ S +Y+E+
Sbjct: 224 YTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELL 283
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+ V + +I+ C AKR+ EA +F EM P+ ++ +L++G
Sbjct: 284 KSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQ 343
Query: 133 EALQFFGQSKKRGFEPE-----------------------------------APTYNAVV 157
EAL + + + G P+ A YNA++
Sbjct: 344 EALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALI 403
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + +A M + GI PN +Y ++ K G+ + A +++ M K G
Sbjct: 404 DEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAK-GI 462
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
EP V TY ++ N +D A R+ EM G+ P S L++ LC E+++ +A +
Sbjct: 463 EPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVR 522
Query: 278 YFQEMLDIGIRPPGQLFSNL 297
+ E + +FSN
Sbjct: 523 FVMEYSGLKCSDIHSVFSNF 542
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 139/305 (45%), Gaps = 16/305 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M +FG+ +P +N L+D +S + + A ++ +M + PD + +I++ G
Sbjct: 317 MPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQ 376
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + +++DG + +Y +I+ +C +EA+ M +P+ + +
Sbjct: 377 MHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSS 436
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ A+ + + +G EP TY A++ + + I+ A+R+ EM + G
Sbjct: 437 LIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENG 496
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEA---------------YSVFKRMS-RKPGTEPTVSTY 224
I PN T +++ L + R +EA +SVF + + P Y
Sbjct: 497 ISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIY 556
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
++ + Q A +++ M+ G++P Y+ LI C + +A + +M+
Sbjct: 557 MTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMK 616
Query: 285 IGIRP 289
IG++P
Sbjct: 617 IGVKP 621
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 4/243 (1%)
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+ G+++ A DEA+ +FR + P+ + +++GL +R A + F +
Sbjct: 121 ALGVLVIALSQMGLLDEALYVFRRLRTLPALPACN---AVLDGLVKARRPGCAWELFDEM 177
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+RG P TYN ++ A + + A + D+M I PN TY ++ L + G
Sbjct: 178 LRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCI 237
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
+A +F M ++ G +P TY +++ C V+ A+ ++ E+ G+ P +++T
Sbjct: 238 GDAERLFDAM-KEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTT 296
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLR 321
LI+ C + +A F EM G+ P ++++L G + A+ L Q++ +L
Sbjct: 297 LIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLG 356
Query: 322 KTP 324
P
Sbjct: 357 LCP 359
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 1/233 (0%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P + + +++ A+R A ELF EM PS + TLIN + +++A +
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ Q + +P TY ++ A C I DA R+ D M++ G+ PN TY++++ +
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
A +++ + K G P + ++ FC + A ++ EM GV P +
Sbjct: 269 RDDVNSAVVLYQEL-LKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVP 327
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+Y++L++ +A +QEM +G+ P S + + L D G A
Sbjct: 328 VYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVA 380
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 4/175 (2%)
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
AP +V A +++A + +R P + VL L+KA R A+ +F
Sbjct: 119 APALGVLVIALSQMGLLDEALYVFRRLRTL---PALPACNAVLDGLVKARRPGCAWELFD 175
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M R+ G P+V TY ++ + V A +WD+M A+ + P + Y+T+I +LC E
Sbjct: 176 EMLRR-GLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEE 234
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ DA + F M + G++P ++ L +AVVL Q++ K P
Sbjct: 235 GCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNP 289
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 159/309 (51%), Gaps = 1/309 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ G+ + +N LI L ++ A+E+F +MK+ DPD +Y ++L+ G+ +
Sbjct: 758 ENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRI 817
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
M ++ EM + G++ V+Y +I+ +K DEA+ L+ ++ + P+P + L
Sbjct: 818 EDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPL 877
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++GL + + +A F + + G EP YN ++ Y + + + M + G+
Sbjct: 878 LDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGM 937
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ ++Y +V+ L GR + S FK+++ G EP + TY +++ + +++ A+
Sbjct: 938 NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM-GLEPDLITYNLLIHGLGKSGRLEEAL 996
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++++M+ +G+ P ++ Y++LI L K +A K ++E+L G +P ++ L +
Sbjct: 997 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGY 1056
Query: 302 RDEGMEETA 310
G E A
Sbjct: 1057 SVSGSPENA 1065
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K ++ LI LC + + A++VF KMK PD +Y LL+ G +
Sbjct: 267 MEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD 326
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S++E++ +K DG+ +VVSY ++A C R DEA+++F EM+ P + + +
Sbjct: 327 SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNS 386
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G R + AL+ F G P T+ + + S A + + M+ G
Sbjct: 387 LISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKG 446
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + VL+ L K GR A VF + + G P TY ++++ + D A
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRVFHEL-KAMGISPDNITYTMMIKCCSKASNADEA 505
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+I+ EM P + ++LI+ L + ++A K F E+ ++ + P ++ L
Sbjct: 506 MKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAG 565
Query: 301 LRDEG 305
L EG
Sbjct: 566 LGREG 570
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K +N +I L KS+ ++ A ++ ++ F P +Y LL+G + N
Sbjct: 827 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + G EP+ Y I++N + A ++ ELF M P +
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ RL++ L +F Q G EP+ TYN ++ S R+ +A + ++M K G
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ +L KAG+ EA +++ + K G +P V TY ++R + + + A
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAK-GWKPNVFTYNALIRGYSVSGSPENA 1065
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSL 266
+ M G P Y L N +
Sbjct: 1066 FAAYGRMIVGGCRPNSSTYMQLPNQM 1091
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 139/290 (47%), Gaps = 1/290 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+I LCK + A E+ K + SY L+ G + + E++ EMK G
Sbjct: 737 IIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLG 796
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD +Y ++++A + R ++ +++ EM K + + T+I+GL K L EA+
Sbjct: 797 CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAI 856
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ Q GF P TY ++ I DA + DEM +CG PN Y+I+L+
Sbjct: 857 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 916
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
AG TE+ +F+ M + G P + +Y +V+ C + +++ + + ++ G+ P
Sbjct: 917 RIAGDTEKVCELFESMVEQ-GMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 975
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ Y+ LI+ L +L++A + +M GI P +++L L G
Sbjct: 976 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAG 1025
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 159/330 (48%), Gaps = 8/330 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ L+ K R E + +M+ R P++ SYTI + GQ L
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEA 260
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ R+M+++G +PDVV+ ++I C A R +A ++F +M+A++ KP + TL++
Sbjct: 261 YRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK 320
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
G + + K G+ +Y A V A C R+++A + DEM++ GI P
Sbjct: 321 CGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQ 380
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ ++ +KA R A +F M+ G P T+ + + + + A++ +
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIH-GPTPNGYTHVLFINYHGKSGESLKALKRY 439
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-----KQ 299
+ MK++G++P + + ++ L +L A + F E+ +GI P ++ + K
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKA 499
Query: 300 ALRDEGMEETAVVLAQKI--DKLRKTPLVD 327
+ DE M+ A ++ + D L L+D
Sbjct: 500 SNADEAMKIFAEMIENRCAPDVLAMNSLID 529
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 144/311 (46%), Gaps = 1/311 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
+ L++ + K E++ E + + D + ++ + K L+ +E+ ++ ++
Sbjct: 700 HSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFEN 759
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G SY +I D A ELF EM+ C P + +++ +G R+ +
Sbjct: 760 LGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIED 819
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
L+ + +G++ TYN ++ S +++A + ++ G P TY +L
Sbjct: 820 MLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLD 879
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+K G E+A ++F M + G EP + Y I++ + + +++ M +G+
Sbjct: 880 GLLKDGNIEDAEALFDEM-LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMN 938
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y+ +I++LC + +L+D YF+++ D+G+ P ++ L L G E A+ L
Sbjct: 939 PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSL 998
Query: 314 AQKIDKLRKTP 324
++K P
Sbjct: 999 YNDMEKKGIAP 1009
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 128/282 (45%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N LI K+ RA E+F+ M P+ ++ + + G+
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + Y MK G PDVV+ ++ R A +F E++A P +
Sbjct: 432 SLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTM 491
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I EA++ F + + P+ N+++ + R N+A+++ E+++
Sbjct: 492 MIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMN 551
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ +L L + G+ +E + + M+ P + TY V+ C N +V+ A
Sbjct: 552 LEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSN-SFPPNIITYNTVLDCLCKNGEVNYA 610
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ + M G +P + Y+T++ L ED+LD+A F +M
Sbjct: 611 LDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM 652
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 110/213 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ N ++ L K+ + A+ VF ++K PD +YT++++ + N
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ EM ++ PDV++ +I+ A R +EA ++F E++ N +P+ + T
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNT 561
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GLG E ++ E +Q F P TYN V+ C + +N A M+ M G
Sbjct: 562 LLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG 621
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
P+ +Y+ V++ L+K R +EA+ +F +M +
Sbjct: 622 CMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKK 654
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 2/262 (0%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
KS +A + ++ MK + PD+ + +L G + L V+ E+K G PD +
Sbjct: 428 KSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNI 487
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+Y +MI A DEA+++F EM C P +LI+ L R +EA + F +
Sbjct: 488 TYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL 547
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
K+ EP TYN ++ ++ + ++++ M PN TY+ VL L K G
Sbjct: 548 KEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEV 607
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
A + M+ G P +S+Y V+ ++D A ++ +MK + + P T
Sbjct: 608 NYALDMLYSMTMN-GCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATVCT 665
Query: 262 LINSLCHEDKLDDACKYFQEML 283
++ S + +A +E +
Sbjct: 666 ILPSFVRSGLMKEALHTVREYI 687
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 8/218 (3%)
Query: 92 SAKRYDEAVELF----REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
+A +EA+ELF R+ + S + L+ G R+ + Q F +++ +
Sbjct: 77 AAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHG---RVGDVAQVFDLMQRQIIK 133
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
T+ V GA + A + M++ GI N TY+ +++ L+K+G EA V
Sbjct: 134 ANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDV 193
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+K M+ G PTV TY +++ F + + + EM+ARGV P ++ Y+ I L
Sbjct: 194 YKAMAAD-GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLG 252
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+L++A + ++M + G +P + L Q L D G
Sbjct: 253 QAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAG 290
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 17/249 (6%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
R + ++F M+ K + FCT+ +G E L A K+ G A TYN
Sbjct: 116 RVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYN 175
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ S +A + M G+ P RTY +++ K E + M +
Sbjct: 176 GLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR 235
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P V +Y I +R+ +++ A RI +M+ G P + + LI LC +L D
Sbjct: 236 -GVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLAD 294
Query: 275 ACKYFQEM---------------LD-IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
A F +M LD G + S + AL+ +G + V +D
Sbjct: 295 AKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVD 354
Query: 319 KLRKTPLVD 327
L + VD
Sbjct: 355 ALCQVGRVD 363
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 151/325 (46%), Gaps = 9/325 (2%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
E+ FN L+D LCK V+ + + +M+ R PD ++ +L GW + ++ ++
Sbjct: 131 EINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDATTFNVLFFGWCRVRDPKKAMKLL 189
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM---EATNCKPSPHIFCTLINGL 125
EM G +P+ +Y I+ C A DEA +LF M + P+ F +I L
Sbjct: 190 EEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALMIVAL 249
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ E + G+ G P+ TY V+ C + ++ +AY+ +DEM G P+
Sbjct: 250 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPPDI 309
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ L L + +++EA ++ RM + P+V TY +++ MF D A W
Sbjct: 310 VTYNCFLRVLCENRKSDEALKLYGRMV-ESRCAPSVQTYNMLISMFFEMDDPDGAFNTWK 368
Query: 246 EMKARGVLPVMHMYSTLINSL--CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM R + + Y +IN L CH K +AC +E+++ G++ P + F + L
Sbjct: 369 EMDERDCVQDIETYCVMINGLFDCHRAK--EACFLLEEVVNKGLKLPYRAFDSFLMRLST 426
Query: 304 EGMEETAVVLAQKIDKLRKTPLVDR 328
G + L++ + K + R
Sbjct: 427 VGNLKAIHKLSEHMKKFYNHSMARR 451
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
+P++ ++ ++++A C E L R M KP F L G + +A++
Sbjct: 129 QPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDATTFNVLFFGWCRVRDPKKAMK 187
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI---GPNTRTYDIVLH 193
+ + G +PE TY A + +C + +++A + + M G P +T+ +++
Sbjct: 188 LLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALMIV 247
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L K + EE + + RM G P VSTY+ V+ C +V+ A + DEM +G
Sbjct: 248 ALAKNDKAEECFELIGRMI-STGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYP 306
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
P + Y+ + LC K D+A K + M++ P Q ++ L
Sbjct: 307 PDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNML 350
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 88/207 (42%), Gaps = 3/207 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR---RFDPDIKSYTILLEGWGQ 57
M + G K E + IDT C++ V+ A ++F+ M + P K++ +++ +
Sbjct: 192 MIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALMIVALAK 251
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
E+ M G PDV +Y +I C A + +EA + EM P
Sbjct: 252 NDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPPDIVT 311
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ + L ++ EAL+ +G+ + P TYN ++ + + A+ EM
Sbjct: 312 YNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWKEMD 371
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEA 204
+ + TY ++++ L R +EA
Sbjct: 372 ERDCVQDIETYCVMINGLFDCHRAKEA 398
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 1/292 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +I+ C++ +V RA EVFD+ +P+ +Y L+ G+ + + + + +M+
Sbjct: 251 YSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQ 310
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + + + MI+ +C D+A+E+ ME + + + TL GL R+
Sbjct: 311 VRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 370
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA ++G P +Y ++ +C + +A R+ EM G P+ TY++++
Sbjct: 371 EAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMM 430
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
IK G EA FK+ K G P + +Y +V C N +VD+A+R+++EMK RG
Sbjct: 431 DGYIKKGSIREAER-FKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 489
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
P + Y+ LI+ L E + ++A + + ML G+ P L+S L +L +
Sbjct: 490 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTD 541
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 157/313 (50%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + + L+D L +R + + + VF++MK + D+ Y+ ++ + + N
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EV+ E +G EP+ +YG +IN C + + A L +M+ + +F T
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + + +AL+ +K G E + TYN + + R+++A ++ M + G
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN +Y ++ G EA +F+ M+ G EP++ TY +++ + + A
Sbjct: 384 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN-GAEPSLVTYNVMMDGYIKKGSIREA 442
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R EM+ +G++P ++ Y+ L++ C K+D A + F+EM G +P ++ L
Sbjct: 443 ERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 502
Query: 301 LRDEGMEETAVVL 313
L EG E A L
Sbjct: 503 LAKEGRSEEAFQL 515
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
S +++++G+ + + ++ EM G + + + Y +++A+ K D E+ + M
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 204
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
E +P+ + L++GL + + +++ F + K + + Y++V+ AYC + +
Sbjct: 205 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 264
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS-RKPGTEPTVSTYE 225
A + DE GI PN TY +++ K G+ E A + M R G V +
Sbjct: 265 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV--FN 322
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
++ +C VD A+ I M+ G+ ++ Y+TL L +++D+A + M++
Sbjct: 323 TMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382
Query: 286 GIRPPGQLFSNLKQALRDEG 305
G+RP ++ L +EG
Sbjct: 383 GVRPNHVSYTTLISIHCNEG 402
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + LI C + A+ +F +M +P + +Y ++++G+ ++ ++
Sbjct: 383 GVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREA 442
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+EM+ G PD+ SY +++ HC + D A+ LF EM+ KP+ + LI+G
Sbjct: 443 ERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 502
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
L E R EA Q + G P+ Y+A+VG+
Sbjct: 503 LAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGS 537
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 97/195 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G++ ++ +N L L ++ ++ A+ + M ++ P+ SYT L+ + +
Sbjct: 344 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++REM +G EP +V+Y +M++ + EA +EME P + +
Sbjct: 404 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAA 463
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ AL+ F + K+RG +P Y A++ R +A+++ D M G
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523
Query: 181 IGPNTRTYDIVLHHL 195
+ P+ Y ++ L
Sbjct: 524 LTPDDALYSALVGSL 538
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 11/249 (4%)
Query: 78 PDVV---SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK---RL 131
PD V S ++++ +C + R A +L EM K + + +L++ EK R+
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+E L+ + G EP TY +V + I + +EM+ + + Y V
Sbjct: 198 AEMLKVM---ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSV 254
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ +AG A VF G EP TY ++ FC Q++ A + +M+ RG
Sbjct: 255 INAYCRAGNVRRASEVFDECVGN-GIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETA 310
V +++T+I+ C ++ +D A + M +GI ++ L LR M+E
Sbjct: 314 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAK 373
Query: 311 VVLAQKIDK 319
+L I+K
Sbjct: 374 NLLRIMIEK 382
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L +N ++D K + A+ +M+K+ PDI SY L+ G +
Sbjct: 418 GAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVA 477
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMK G +P++V+Y +I+ R +EA +L+ M P ++ L+
Sbjct: 478 LRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGS 537
Query: 125 LGSEKR 130
L ++K+
Sbjct: 538 LHTDKK 543
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 141/299 (47%), Gaps = 5/299 (1%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
+ + LCK +E A+E FD M + +I SY+ LL G+ L+ M+ ++ M
Sbjct: 320 STFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVR 379
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
DG P+ + I++N + EA+ +F +M+ P + +I+ + +
Sbjct: 380 DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDD 439
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A+ F +G EP Y ++ +C + A ++ E+R G+GP ++ +++
Sbjct: 440 AMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLIN 499
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
HL K GR EA +F + R G + V+ + ++ +C ++ A R+ D M + G+
Sbjct: 500 HLCKEGRVFEAQRIFDMIIRT-GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIE 558
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP----GQLFSNLKQALRDEGMEE 308
P + Y TL+N C ++DD F+E+L G++P G + L A R +E
Sbjct: 559 PDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKE 617
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 152/310 (49%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL ++ + +I C+ ++ A + F+ M + +P+ Y L++G+ +
Sbjct: 412 MQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGD 471
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L+ E+ E+++ G P ++S+ +IN C R EA +F + T K +IF +
Sbjct: 472 LVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTS 531
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++SEA + G EP+ TY +V C + RI+D + E+ G
Sbjct: 532 LIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG 591
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P T TY I+L L AGRT A +F+ M + G T+ TY I++ C N + A
Sbjct: 592 VKPTTFTYGIILDGLFHAGRTAAAKEMFQEMI-ESGIAVTIPTYSILLTGLCRNNCTEEA 650
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ ++ A V + + + +I+ + + ++A F + D G+ P Q ++ + +
Sbjct: 651 ITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMEN 710
Query: 301 LRDEGMEETA 310
L EG E A
Sbjct: 711 LIKEGSVEEA 720
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 147/300 (49%), Gaps = 7/300 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M + G+ + +N +I LCK+R V++AQ + +M PD +Y L+ G+ GQ
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
K + M ++EM G P+ V+ + C R +EA E F M A K +
Sbjct: 297 WKQAVRM---FKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIIS 353
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TL++G + L + F + G P +N +V Y + +A + ++M+
Sbjct: 354 YSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQ 413
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K G+ P+ TY V+H + G ++A F M K G EP + Y+ +++ FC + +
Sbjct: 414 KRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK-GVEPNFAVYQCLIQGFCTHGDL 472
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A + E++ +G+ P + +++LIN LC E ++ +A + F ++ G + +F++L
Sbjct: 473 VKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSL 532
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 135/276 (48%), Gaps = 1/276 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN L++ K V A +F+ M+KR +PD+ +Y ++ + + ++ + + M
Sbjct: 389 FNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMI 448
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D G EP+ Y +I C+ +A EL E+ P F +LIN L E R+
Sbjct: 449 DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVF 508
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + F + G + + + +++ YC ++++A+R+ D M GI P+ TY ++
Sbjct: 509 EAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLV 568
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K GR ++ +F+ + K G +PT TY I++ + + A ++ EM G+
Sbjct: 569 NGCCKNGRIDDGLILFRELLHK-GVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGI 627
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+ YS L+ LC + ++A FQ++ + ++
Sbjct: 628 AVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVK 663
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 142/293 (48%), Gaps = 1/293 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ ++ L K V A ++F +M ++ P++ +Y ++ + + + + R+M
Sbjct: 214 YSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMV 273
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G +PD V+Y +I+ + + ++ +AV +F+EM + P+ T + L R+
Sbjct: 274 GNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIE 333
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA +FF +G + +Y+ ++ Y + + D + + M + GI PN ++I++
Sbjct: 334 EAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ K G EA +F+ M ++ G P V TY V+ FC +D AM ++ M +GV
Sbjct: 394 NGYAKCGMVREAMFIFEDMQKR-GLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGV 452
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P +Y LI C L A + E+ + G+ P F++L L EG
Sbjct: 453 EPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG 505
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 153/326 (46%), Gaps = 7/326 (2%)
Query: 5 GLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
G + LP ++ LID C++R ++ A F + ++ D+ + LL G K
Sbjct: 95 GPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRT 154
Query: 62 -LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIF 118
+++ ++ M + G PD +SY ++ + C R A+++ R + C + ++
Sbjct: 155 DEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVY 214
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
T+++GL E ++ EA F + ++G P TYN+V+ A C + ++ A ++ +M
Sbjct: 215 STVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVG 274
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P+ TY+ ++H G+ ++A +FK M+ + G P T V C + +++
Sbjct: 275 NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSR-GVIPNTVTCSTFVAFLCKHGRIE 333
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A +D M A+G + YSTL++ L D F M+ GI P +F+ L
Sbjct: 334 EAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP 324
GM A+ + + + K P
Sbjct: 394 NGYAKCGMVREAMFIFEDMQKRGLNP 419
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 1/274 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + F LI+ LCK V AQ +FD + + D+ +T L++G+ +
Sbjct: 486 GLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEA 545
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ M G EPD+V+YG ++N C R D+ + LFRE+ KP+ + +++G
Sbjct: 546 FRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDG 605
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R + A + F + + G PTY+ ++ C + +A + ++ + +
Sbjct: 606 LFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFD 665
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+I++ + KA R EEA +F + G PTV TY I++ V+ A ++
Sbjct: 666 IVILNIMISKMFKARRREEAEGLFASIPDY-GLVPTVQTYTIMMENLIKEGSVEEAEGVF 724
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
M G+ P H + ++ +L + ++ A Y
Sbjct: 725 SVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIY 758
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ + L++ CK+ ++ +F ++ + P +Y I+L+G
Sbjct: 552 MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGR 611
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+++EM + G + +Y I++ C +EA+ +F+++ A N K I
Sbjct: 612 TAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNI 671
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + +R EA G P Y G
Sbjct: 672 MISKMFKARRREEA---------EGLFASIPDY--------------------------G 696
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+ P +TY I++ +LIK G EEA VF M K G PT ++VR
Sbjct: 697 LVPTVQTYTIMMENLIKEGSVEEAEGVFSVM-LKSGLSPTSHFINVIVR 744
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 6/219 (2%)
Query: 99 AVELFREMEATN----CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
AV LF M P+ + + LI+ +RL A FFG ++G + + +
Sbjct: 83 AVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVS 142
Query: 155 AVVGAYCWSMRINDAYRMM-DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
+++ C + R ++A ++ M + G P+ +Y VL + GR++ A + + +
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202
Query: 214 KPGTEP-TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
+ G P V Y VV +V A ++ EM +GV P + Y+++I++LC +
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
D A ++M+ G++P ++ L G + AV
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAV 301
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 141/272 (51%), Gaps = 2/272 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +I +L K E + +V ++M +PD+ ++ +++G+ + N+ EVY+ M
Sbjct: 119 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 178
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME--ATNCKPSPHIFCTLINGLGSEKR 130
+ G++PD VSY I+I+ + DE++++ EM A P+ F TLI+GL
Sbjct: 179 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGE 238
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L +AL+ FG + G +P TY ++ C + ++ A + ++M + I P+ Y+
Sbjct: 239 LEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 298
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ K G +EA +++ MS G +PT+ T+ ++ FC ++ A + EM +
Sbjct: 299 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
G+ Y LI L KLD+A + +++M
Sbjct: 359 GLAADTCTYRILIAGLSRATKLDEALEVYKQM 390
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 150/311 (48%), Gaps = 8/311 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ FN ++ +S ++E+A+EV+ M + + PD SY IL+ G + L
Sbjct: 146 GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDES 205
Query: 65 NEVYRE--MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ E M+ G+ P+V+++ +I+ C ++A+E+F M CKP+ + + TLI
Sbjct: 206 LKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 265
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGI 181
GL +++ +A + F + + P+A YN+++ YC +++A ++ EM G+
Sbjct: 266 AGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 325
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P T++ ++ K G+ A + M K G TY I++ ++D A+
Sbjct: 326 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK-GLAADTCTYRILIAGLSRATKLDEAL 384
Query: 242 RIWDEMKARGVL--PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
++ +M+ + L PV + + + LC +D A F+ G P + F L +
Sbjct: 385 EVYKQMREKKFLLDPVSCV--SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 442
Query: 300 ALRDEGMEETA 310
+L G E A
Sbjct: 443 SLIKLGRVEDA 453
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 136/287 (47%), Gaps = 2/287 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ ++ +L K+ + +A EVF+ MK P + +Y +L+ ++++ MK
Sbjct: 13 YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72
Query: 73 -DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ EPD +Y +I+ CS+ + A +L EM N + + ++I L E +
Sbjct: 73 REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
E+ + + G P+ +N V+ + S + A + M + G P+ +Y I+
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192
Query: 192 LHHLIKAGRTEEAYSVFKRMS-RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+H L K G+ +E+ + M+ R G P V T+ ++ C +++ A+ ++ M
Sbjct: 193 IHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 252
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
G P + Y+TLI LC +K+ A + F++M I P +++L
Sbjct: 253 GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSL 299
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+Y +++ + L EV+ MK + P +V+Y ++IN+ C+A + +A++LF+ M
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 107 E-ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
+ +P + TLI+GL S A + + + + TY++++ + +
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
++Y++++EM G P+ ++ V+ ++ E+A V++ M + G +P +Y
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV-ESGYKPDNVSYH 190
Query: 226 IVVRMFCYNAQVDMAMRIWDE--MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
I++ ++D +++I E M+A G +P + +STLI+ LC +L+ A + F ML
Sbjct: 191 ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 250
Query: 284 DIGIRPPGQLFSNLKQAL 301
+ G +P ++ L L
Sbjct: 251 EAGCKPNKYTYTTLIAGL 268
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + LI LC++ V +A+E+F+KM + PD +Y L+ G+ ++ +
Sbjct: 249 MLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGS 308
Query: 61 LLSMNEVYREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ ++YREM G +P +V++ +I+ C + A EL EM +
Sbjct: 309 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYR 368
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI GL +L EAL+ + Q +++ F + + + VG C + I+ AY + + RK
Sbjct: 369 ILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKS 428
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEA 204
G PN T+ I+ LIK GR E+A
Sbjct: 429 GAVPNPETFRILSESLIKLGRVEDA 453
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 118/241 (48%), Gaps = 2/241 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+ LI LC++ +E+A EVF M + P+ +YT L+ G + + ++ E++ +M
Sbjct: 226 FSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMT 285
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEA-TNCKPSPHIFCTLINGLGSEKRL 131
PD V+Y +I +C DEA +L+REM +P+ F TLI+G +L
Sbjct: 286 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 345
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A + + +G + TY ++ + ++++A + +MR+ + +
Sbjct: 346 GRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 405
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K G ++AY+VF+ +RK G P T+ I+ +V+ A ++ + KAR
Sbjct: 406 VGGLCKTGNIDQAYAVFE-ATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 464
Query: 252 V 252
+
Sbjct: 465 I 465
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 1/159 (0%)
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
Y+ VV + + + A + + M+ P+ TY+++++ AG +A +F+ M
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
R+ EP TY ++ C + + A ++ EM+ + + + YS++I SL E K
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEET 309
+++ K +EM+ G P F+ + Q R ME+
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKA 170
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL+ + FN LID CK + RA E+ +M + D +Y IL+ G + L
Sbjct: 324 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEA 383
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EVY++M++ F D VS + C D+A +F + P+P F L
Sbjct: 384 LEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSES 443
Query: 125 LGSEKRLSEALQFFGQSKKR 144
L R+ +A + +K R
Sbjct: 444 LIKLGRVEDAQKLMEPAKAR 463
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 159/309 (51%), Gaps = 1/309 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
+ G+ + +N LI L ++ A+E+F +MK+ DPD +Y ++L+ G+ +
Sbjct: 758 ENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRI 817
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
M ++ EM + G++ V+Y +I+ +K DEA+ L+ ++ + P+P + L
Sbjct: 818 EDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPL 877
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++GL + + +A F + + G EP YN ++ Y + + + M + G+
Sbjct: 878 LDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGM 937
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P+ ++Y +V+ L GR + S FK+++ G EP + TY +++ + +++ A+
Sbjct: 938 NPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDM-GLEPDLITYNLLIHGLGKSGRLEEAL 996
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++++M+ +G+ P ++ Y++LI L K +A K ++E+L G +P ++ L +
Sbjct: 997 SLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGY 1056
Query: 302 RDEGMEETA 310
G E A
Sbjct: 1057 SVSGSPENA 1065
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 147/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G K ++ LI LC + + A++VF KMK PD +Y LL+ G +
Sbjct: 267 MEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGD 326
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S++E++ +K DG+ +VVSY ++A C R DEA+++F EM+ P + + +
Sbjct: 327 SRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNS 386
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G R + AL+ F G P T+ + + S A + + M+ G
Sbjct: 387 LISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKG 446
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ + VL+ L K GR A VF + + G P TY ++++ + D A
Sbjct: 447 IVPDVVAGNAVLYGLAKTGRLGMAKRVFHEL-KAMGISPDNITYTMMIKCCSKASNADEA 505
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+I+ EM P + ++LI+ L + ++A K F E+ ++ + P ++ L
Sbjct: 506 MKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAG 565
Query: 301 LRDEG 305
L EG
Sbjct: 566 LGREG 570
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 129/266 (48%), Gaps = 1/266 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K +N +I L KS+ ++ A ++ ++ F P +Y LL+G + N
Sbjct: 827 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + G EP+ Y I++N + A ++ ELF M P +
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L ++ RL++ L +F Q G EP+ TYN ++ S R+ +A + ++M K G
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I PN TY+ ++ +L KAG+ EA +++ + K G +P V TY ++R + + + A
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAK-GWKPNVFTYNALIRGYSVSGSPENA 1065
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSL 266
+ M G P Y L N +
Sbjct: 1066 FAAYGRMIVGGCRPNSSTYMQLPNQM 1091
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 138/290 (47%), Gaps = 1/290 (0%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
+I CK + A E+ K + SY L+ G + + E++ EMK G
Sbjct: 737 IIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLG 796
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
+PD +Y ++++A + R ++ +++ EM K + + T+I+GL K L EA+
Sbjct: 797 CDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAI 856
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ Q GF P TY ++ I DA + DEM +CG PN Y+I+L+
Sbjct: 857 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGY 916
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
AG TE+ +F+ M + G P + +Y +V+ C + +++ + + ++ G+ P
Sbjct: 917 RIAGDTEKVCELFESMVEQ-GMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 975
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ Y+ LI+ L +L++A + +M GI P +++L L G
Sbjct: 976 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAG 1025
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 159/330 (48%), Gaps = 8/330 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ L+ K R E + +M+ R P++ SYTI + GQ L
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEA 260
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ R+M+++G +PDVV+ ++I C A R +A ++F +M+A++ KP + TL++
Sbjct: 261 YRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK 320
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
G + + K G+ +Y A V A C R+++A + DEM++ GI P
Sbjct: 321 CGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQ 380
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y+ ++ +KA R A +F M+ G P T+ + + + + A++ +
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIH-GPTPNGYTHVLFINYHGKSGESLKALKRY 439
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-----KQ 299
+ MK++G++P + + ++ L +L A + F E+ +GI P ++ + K
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKA 499
Query: 300 ALRDEGMEETAVVLAQKI--DKLRKTPLVD 327
+ DE M+ A ++ + D L L+D
Sbjct: 500 SNADEAMKIFAEMIENRCAPDVLAMNSLID 529
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 145/311 (46%), Gaps = 1/311 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
+ L++ + K E++ E + + D + ++ + + K L+ +E+ ++ ++
Sbjct: 700 HSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFEN 759
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
G SY +I D A ELF EM+ C P + +++ +G R+ +
Sbjct: 760 LGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIED 819
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
L+ + +G++ TYN ++ S +++A + ++ G P TY +L
Sbjct: 820 MLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLD 879
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L+K G E+A ++F M + G EP + Y I++ + + +++ M +G+
Sbjct: 880 GLLKDGNIEDAEALFDEM-LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMN 938
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P + Y+ +I++LC + +L+D YF+++ D+G+ P ++ L L G E A+ L
Sbjct: 939 PDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSL 998
Query: 314 AQKIDKLRKTP 324
++K P
Sbjct: 999 YNDMEKKGIAP 1009
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ N ++ L K+ + A+ VF ++K PD +YT++++ + N
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ EM ++ PDV++ +I+ A R +EA ++F E++ N +P+ + T
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNT 561
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GLG E ++ E +Q F P TYN V+ C + +N A M+ M G
Sbjct: 562 LLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNG 621
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
P+ +Y+ V++ L+K GR +EA+ +F +M +
Sbjct: 622 CMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKK 654
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 127/282 (45%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + +N LI K+ RA E+F+ M P+ ++ + + G+
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGE 431
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + Y MK G PDVV+ ++ R A +F E++A P +
Sbjct: 432 SLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTM 491
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I EA++ F + + P+ N+++ + R N+A+++ E+++
Sbjct: 492 MIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMN 551
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ +L L + G+ +E + + M+ P + TY V+ C N +V+ A
Sbjct: 552 LEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSN-SFPPNIITYNTVLDCLCKNGEVNYA 610
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ + M G +P + Y+T++ L E +LD+A F +M
Sbjct: 611 LDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM 652
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 2/262 (0%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
KS +A + ++ MK + PD+ + +L G + L V+ E+K G PD +
Sbjct: 428 KSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNI 487
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+Y +MI A DEA+++F EM C P +LI+ L R +EA + F +
Sbjct: 488 TYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYEL 547
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
K+ EP TYN ++ ++ + ++++ M PN TY+ VL L K G
Sbjct: 548 KEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEV 607
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
A + M+ G P +S+Y V+ ++D A ++ +MK + + P T
Sbjct: 608 NYALDMLYSMTMN-GCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATVCT 665
Query: 262 LINSLCHEDKLDDACKYFQEML 283
++ S + +A +E +
Sbjct: 666 ILPSFVRSGLMKEALHTVREYI 687
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 8/218 (3%)
Query: 92 SAKRYDEAVELF----REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFE 147
+A +EA+ELF R+ + S + L+ G R+ + Q F +++ +
Sbjct: 77 AAADPEEALELFLSVARQPRVVHTTESCNYMLELMRAHG---RVGDVAQVFDLMQRQIIK 133
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
T+ V GA + A + M++ GI N TY+ +++ L+K+G EA V
Sbjct: 134 ANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDV 193
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+K M+ G PTV TY +++ F + + + EM+ARGV P ++ Y+ I L
Sbjct: 194 YKAMAAD-GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLG 252
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+L++A + ++M + G +P + L Q L D G
Sbjct: 253 QAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAG 290
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 98/249 (39%), Gaps = 17/249 (6%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
R + ++F M+ K + FCT+ +G E L A K+ G A TYN
Sbjct: 116 RVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYN 175
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ S +A + M G+ P RTY +++ K E + M +
Sbjct: 176 GLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEAR 235
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P V +Y I +R+ +++ A RI +M+ G P + + LI LC +L D
Sbjct: 236 -GVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLAD 294
Query: 275 ACKYFQEM---------------LD-IGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
A F +M LD G + S + AL+ +G + V +D
Sbjct: 295 AKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVD 354
Query: 319 KLRKTPLVD 327
L + VD
Sbjct: 355 ALCQVGRVD 363
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 162/359 (45%), Gaps = 39/359 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + + L++ +CK+ E+A V D+M+ + P+I +Y +++ G ++
Sbjct: 168 MLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGR 227
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP----- 115
+ ++ + G +PD VSY ++ C++KR+D+ ELF EM NC P+
Sbjct: 228 VDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 287
Query: 116 --HIFC----------------------------TLINGLGSEKRLSEALQFFGQSKKRG 145
FC +IN + + R+ +A +F G
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ +Y V+ C + R NDA ++ EM + PN T++ + L + G E+A
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 407
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ ++M ++ G V TY +V FC +D A+ ++ M + P Y+TL+
Sbjct: 408 MLIEQM-QEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTG 463
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
LC+ ++LD A + EML P F+ L +G + A+ L +++ + TP
Sbjct: 464 LCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTP 522
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 8/320 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K + E+ F+ LI C+ VERA +V +M + + I++ +Q
Sbjct: 274 MEKNCMPNEV-TFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGR 332
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G PD +SY ++ C A+R+++A EL +EM NC P+ F T
Sbjct: 333 VDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNT 392
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I L + + +A+ Q ++ G TYNA+V +C I+ A + M
Sbjct: 393 FICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP--- 449
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PNT TY +L L A R + A + M + P V T+ ++V FC +D A
Sbjct: 450 CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHR-DCPPNVVTFNVLVNFFCQKGFLDEA 508
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + ++M G P + Y+TL + + + +DA + ++ G+ P FS++
Sbjct: 509 IELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGI 568
Query: 301 LRDEGMEETAVV---LAQKI 317
L E E A+ LAQ I
Sbjct: 569 LSKEDRVEEAIQMFHLAQDI 588
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 145/307 (47%), Gaps = 4/307 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+ C+ H++ A+ + M PD +YT L+ + + + +M
Sbjct: 113 YNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDML 169
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+VV+Y +++ A C +++A+ + EM A C P+ + +ING+ E R+
Sbjct: 170 RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + G +P+ +Y ++ C S R +D + EM + PN T+D+++
Sbjct: 230 DARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLI 289
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ G E A V ++M+ T + IV+ C +VD A + + M + G
Sbjct: 290 RFFCRGGMVERAIQVLQQMTEHECATNT-TLCNIVINSICKQGRVDDAFKFLNNMGSYGC 348
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P Y+T++ LC ++ +DA + +EM+ P F+ L +G+ E A++
Sbjct: 349 NPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 408
Query: 313 LAQKIDK 319
L +++ +
Sbjct: 409 LIEQMQE 415
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 150/332 (45%), Gaps = 39/332 (11%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQKNLLSM--- 64
N +I+++CK V+ A + + M +PD SYT +L+G W K LL
Sbjct: 321 NIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVR 380
Query: 65 -----NEV---------------------YREMKDDGFEPDVVSYGIMINAHCSAKRYDE 98
NEV +M++ G VV+Y ++N C D
Sbjct: 381 NNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDS 440
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
A+ELFR M CKP+ + TL+ GL + +RL A + + R P T+N +V
Sbjct: 441 ALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVN 497
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
+C +++A ++++M + G PN TY+ + + K +E+A + + K G
Sbjct: 498 FFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSK-GVS 556
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V T+ ++ + +V+ A++++ + G+ P +Y+ ++ LC ++D+A +
Sbjct: 557 PDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDF 616
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
M+ G P + L + L EG+ + A
Sbjct: 617 LAYMVSNGCMPNESTYIILIEGLAREGLLKEA 648
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 4/253 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N L++ C H++ A E+F M + P+ +YT LL G +
Sbjct: 413 MQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAER 469
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + E+ EM P+VV++ +++N C DEA+EL +M C P+ + T
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNT 529
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L +G+ + +AL+ +G P+ T+++++G R+ +A +M + G
Sbjct: 530 LFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIG 589
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P Y+ +L L K + A M G P STY I++ + A
Sbjct: 590 MRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSN-GCMPNESTYIILIEGLAREGLLKEA 648
Query: 241 MRIWDEMKARGVL 253
+ + +RGV+
Sbjct: 649 QDLLSMLCSRGVV 661
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 105 EMEATNCKPSPHIF-CT-LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCW 162
E+ A+ +P ++ CT LI L R S+A + ++ G + YN +V YC
Sbjct: 63 ELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCR 122
Query: 163 SMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS 222
++ A R++ M + P+ TY ++ L GR +A S+ M R+ G +P V
Sbjct: 123 YGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR-GCQPNVV 178
Query: 223 TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
TY +++ C N+ + AM + DEM+A+G P + Y+ +IN +C E ++DDA +
Sbjct: 179 TYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRL 238
Query: 283 LDIGIRPPGQLFSNLKQAL 301
G +P ++ L + L
Sbjct: 239 FSYGCQPDTVSYTTLLKGL 257
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ ++ +L + GRT +A V R + G+ V Y +V +C +D
Sbjct: 70 GEAPDVYLCTKLIRNLCRRGRTSDAARVL-RAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 128
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A R+ M V P + Y+ LI LC ++ DA +ML G +P ++ L +
Sbjct: 129 ARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 185
Query: 300 AL-RDEGMEETAVVL 313
A+ ++ G E+ VL
Sbjct: 186 AMCKNSGFEQAMAVL 200
>gi|255582603|ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528243|gb|EEF30297.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 841
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 142/275 (51%), Gaps = 1/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+NR+I L K+ +E + F K++ D ++Y L+ + + E+Y M+
Sbjct: 256 YNRVIQHLAKAEKLELSFCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESMQ 315
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D +Y +MI + + R D A +LF+EM+ +PS IF +L++ +G RL
Sbjct: 316 AAQCSLDASTYELMIPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFSSLVDSMGKSGRLD 375
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+++ + + + G A Y +++ +Y + +++ A R+ DEM+K G PN Y +++
Sbjct: 376 TSMKIYMEMQGFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLII 435
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K+G+ + A S+FK M K G PT STY ++ M + QVD AM++++ M G+
Sbjct: 436 ESHAKSGKLDIATSIFKDMD-KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGL 494
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
P + Y+ L+ L + +D A K EM +G
Sbjct: 495 KPGLSTYTALLTLLASKKLVDVAAKILLEMKAMGF 529
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 154/329 (46%), Gaps = 9/329 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N LI + +A E+++ M+ + D +Y +++ + L
Sbjct: 283 GCKIDTQTYNALITSFLNKGLPYKAFEIYESMQAAQCSLDASTYELMIPSLAKSGRLDVA 342
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++EMK+ P + ++++ + R D +++++ EM+ + S ++ +LI
Sbjct: 343 FKLFQEMKERKIRPSFGIFSSLVDSMGKSGRLDTSMKIYMEMQGFGLRSSASMYVSLIES 402
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L AL+ + + KK GF P Y ++ ++ S +++ A + +M K G P
Sbjct: 403 YTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIIESHAKSGKLDIATSIFKDMDKAGFLPT 462
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +L +G+ + A ++ M+ G +P +STY ++ + VD+A +I
Sbjct: 463 PSTYSCLLEMHAASGQVDSAMKLYNSMTNA-GLKPGLSTYTALLTLLASKKLVDVAAKIL 521
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG----QLF-SNLKQ 299
EMKA G V S ++ + +D A ++ M GIR QLF S +K+
Sbjct: 522 LEMKAMG-FSVDVSASDVLMVYIKDGSVDLALRWLSFMGSSGIRTNNFIIRQLFESCMKK 580
Query: 300 ALRDEG--MEETAVVLAQKIDKLRKTPLV 326
L + + ET V A K+D + T ++
Sbjct: 581 GLYESAKPLLETYVNSAAKVDLILYTSIL 609
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 141/310 (45%), Gaps = 5/310 (1%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNE 66
Q +P ++ L + +F K++ + D + Y +L +G + ++ +
Sbjct: 177 QFVPSMTHVVQALKIINDADGMLSLFKWAKRQTWYVVDDECYALLFDGLNKIRDFDGIQS 236
Query: 67 VYREMKDD---GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ EM D G V +Y +I A++ + + F++++ + CK + LI
Sbjct: 237 LFDEMVQDSSKGGISSVYAYNRVIQHLAKAEKLELSFCCFKKVQDSGCKIDTQTYNALIT 296
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
++ +A + + + +A TY ++ + S R++ A+++ EM++ I P
Sbjct: 297 SFLNKGLPYKAFEIYESMQAAQCSLDASTYELMIPSLAKSGRLDVAFKLFQEMKERKIRP 356
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ + ++ + K+GR + + ++ M + G + S Y ++ + ++D A+R+
Sbjct: 357 SFGIFSSLVDSMGKSGRLDTSMKIYMEM-QGFGLRSSASMYVSLIESYTKAGKLDTALRL 415
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
WDEMK G P +Y+ +I S KLD A F++M G P +S L +
Sbjct: 416 WDEMKKAGFRPNYGLYTLIIESHAKSGKLDIATSIFKDMDKAGFLPTPSTYSCLLEMHAA 475
Query: 304 EGMEETAVVL 313
G ++A+ L
Sbjct: 476 SGQVDSAMKL 485
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 116/256 (45%), Gaps = 11/256 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M FGL+ + LI++ K+ ++ A ++D+MKK F P+ YT+++E +
Sbjct: 384 MQGFGLRSSASMYVSLIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIIESHAKSGK 443
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++++M GF P +Y ++ H ++ + D A++L+ M KP +
Sbjct: 444 LDIATSIFKDMDKAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLKPGLSTYTA 503
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L S+K + A + + K GF + + V+ Y ++ A R + M G
Sbjct: 504 LLTLLASKKLVDVAAKILLEMKAMGFSVDVSASD-VLMVYIKDGSVDLALRWLSFMGSSG 562
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I RT + ++ L ++ + Y S KP E V++ V + Y + +
Sbjct: 563 I----RTNNFIIRQLFESCMKKGLYE-----SAKPLLETYVNS-AAKVDLILYTSILANL 612
Query: 241 MRIWDEMKARGVLPVM 256
+R +E R ++ ++
Sbjct: 613 VRCQEEQHERHLMSIL 628
>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 152/322 (47%), Gaps = 2/322 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
++FG +++ N L+ LC+ HV A F+ +K + + +Y +++ GW + +
Sbjct: 230 EEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVKGK-IPFNCMTYNVIIGGWSKFGRV 288
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
M V+ EM++DGF PD +S+ ++ A + ++AV +F ME C P +++ +
Sbjct: 289 SEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAM 348
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+ S E ++++ + +P TY ++ + ++ DA M DEM G+
Sbjct: 349 ISNFISVGNFDECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRGM 408
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
T T + L G A ++ + +RK G + ++S Y++++ + M +
Sbjct: 409 VTKTGTVTSFIEPLCSFGPPHAAMVIYTK-ARKVGCKISLSAYKLLLMRLSRFGKCGMML 467
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+IWDEM+ G M +Y LI+ LC+ + ++A +E + G P + S L L
Sbjct: 468 KIWDEMQESGYSSDMEVYEYLISGLCNIGQFENAVLVMEESMRKGFCPSRFICSKLNNKL 527
Query: 302 RDEGMEETAVVLAQKIDKLRKT 323
E A L KI R +
Sbjct: 528 LASNKVERAYRLFLKIKHARHS 549
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 36/277 (12%)
Query: 79 DVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF 138
DV SY ++I A K D V+ E+ + F +I+ L +R+ +A+Q F
Sbjct: 166 DVDSYNVVIRALGRRKFIDFMVKFLHELRVEGVSMNSETFSIVIDSLVRARRVYKAIQMF 225
Query: 139 GQSKKR-GFEPEAP----------------------------------TYNAVVGAYCWS 163
G ++ GFE +A TYN ++G +
Sbjct: 226 GNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVKGKIPFNCMTYNVIIGGWSKF 285
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
R+++ R+ +EM + G P+ ++ +L L +AG+ E+A +F M K G P +
Sbjct: 286 GRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEK-GCVPDTNV 344
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y ++ F D M+ + + ++ P + Y+ +I+ L K+ DA + F EML
Sbjct: 345 YNAMISNFISVGNFDECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEML 404
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
D G+ ++ + L G A+V+ K K+
Sbjct: 405 DRGMVTKTGTVTSFIEPLCSFGPPHAAMVIYTKARKV 441
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 115/282 (40%), Gaps = 36/282 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + F+ L++ L ++ +E A +F M+++ PD Y ++ + N
Sbjct: 298 MEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGN 357
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ YR + +P++ +Y MI+ A + +A+E+F EM
Sbjct: 358 FDECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRG---------- 407
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ G+ E L FG P + A+V + + RK G
Sbjct: 408 MVTKTGTVTSFIEPLCSFG-----------PPHAAMV--------------IYTKARKVG 442
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ Y ++L L + G+ ++ M ++ G + YE ++ C Q + A
Sbjct: 443 CKISLSAYKLLLMRLSRFGKCGMMLKIWDEM-QESGYSSDMEVYEYLISGLCNIGQFENA 501
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ + +E +G P + S L N L +K++ A + F ++
Sbjct: 502 VLVMEESMRKGFCPSRFICSKLNNKLLASNKVERAYRLFLKI 543
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Query: 135 LQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
+ FF + K+ + +YN V+ A I+ + + E+R G+ N+ T+ IV+
Sbjct: 151 IMFFNWAIKQPMISKDVDSYNVVIRALGRRKFIDFMVKFLHELRVEGVSMNSETFSIVID 210
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L++A R +A +F + + G E + ++++ C + V A ++ +K G +
Sbjct: 211 SLVRARRVYKAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVK--GKI 268
Query: 254 PVMHM-YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P M Y+ +I ++ + + F+EM + G P FS L + L G E AV+
Sbjct: 269 PFNCMTYNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVM 328
Query: 313 L 313
+
Sbjct: 329 I 329
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/221 (19%), Positives = 92/221 (41%), Gaps = 6/221 (2%)
Query: 4 FGLKQE---LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
FG +E +PD +N +I + + + + + + DP+I +YT ++ G +
Sbjct: 330 FGSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPNIDTYTRMISGLIK 389
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ E++ EM D G + I CS A+ ++ + CK S
Sbjct: 390 ASKVADALEMFDEMLDRGMVTKTGTVTSFIEPLCSFGPPHAAMVIYTKARKVGCKISLSA 449
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L+ L + L+ + + ++ G+ + Y ++ C + +A +M+E
Sbjct: 450 YKLLLMRLSRFGKCGMMLKIWDEMQESGYSSDMEVYEYLISGLCNIGQFENAVLVMEESM 509
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
+ G P+ + + L+ + + E AY +F ++ +E
Sbjct: 510 RKGFCPSRFICSKLNNKLLASNKVERAYRLFLKIKHARHSE 550
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 145/294 (49%), Gaps = 24/294 (8%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID + K +HV A +++ +M +R PD+ +Y+ L+ G+ L +++ +M
Sbjct: 211 YNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMI 270
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ +PDV ++ I+++ C R +A + M + KP+ F TL++G ++++
Sbjct: 271 LENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMK 330
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E F K+G +P TY +++ YC ++N A ++ + M + G+ N +Y+I++
Sbjct: 331 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMI 390
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM----- 247
+ K + ++A +F M K P V TY ++ C + ++ A ++ +EM
Sbjct: 391 NGFCKIKKVDKAMKLFIEMHHKH-IIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQ 449
Query: 248 ------------------KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
K +G+ P MH + LI LC KL+ A K F+++L
Sbjct: 450 PPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLL 503
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 147/309 (47%), Gaps = 7/309 (2%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + + LI+ LCK A ++ ++ + + Y +++G + K++
Sbjct: 167 LGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVND 226
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y EM PDVV+Y +I + +A++LF +M N KP + F L++
Sbjct: 227 AFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVD 286
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G E RL +A + +P T+N +V +C ++ + + M K GI P
Sbjct: 287 GFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKP 346
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY ++ + +A +F MS++ G V +Y I++ FC +VD AM++
Sbjct: 347 NVVTYCSLMDGYCLVKQVNKAKKIFNTMSQR-GVTANVHSYNIMINGFCKIKKVDKAMKL 405
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP-----GQLFSNLK 298
+ EM + ++P + Y++LI+ LC K+ A + EM D G +PP + + L
Sbjct: 406 FIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRG-QPPNIITYNSILNALL 464
Query: 299 QALRDEGME 307
L+D+G++
Sbjct: 465 TKLKDQGIQ 473
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 151/361 (41%), Gaps = 44/361 (12%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ FN LI+ C+ + A V K+ K ++PDI + ++G+ + +
Sbjct: 98 GINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQA 157
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSA------------------------------- 93
+ ++ GF D VSYG +IN C
Sbjct: 158 LNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDG 217
Query: 94 ----KRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
K ++A +L+ EM A P + LI G +L +A+ F + +P+
Sbjct: 218 MSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPD 277
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
T+N +V +C R+ A ++D M I PN T++ ++ K + +E +VF
Sbjct: 278 VYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFA 337
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M K G +P V TY ++ +C QV+ A +I++ M RGV +H Y+ +IN C
Sbjct: 338 MM-MKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKI 396
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLVDRG 329
K+D A K F EM I P +++L L G A L ++ DRG
Sbjct: 397 KKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMH--------DRG 448
Query: 330 Q 330
Q
Sbjct: 449 Q 449
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 131/245 (53%), Gaps = 13/245 (5%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K ++ FN L+D CK +++A+ V D M + P++ ++ L++G+ + + +
Sbjct: 274 IKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGK 333
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
V+ M G +P+VV+Y +++ +C K+ ++A ++F M + H + +ING
Sbjct: 334 TVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGF 393
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
K++ +A++ F + + P+ TYN+++ C S +I+ A+++++EM G PN
Sbjct: 394 CKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNI 453
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ +L+ L+ + + G +P + T I+++ C + +++ A ++++
Sbjct: 454 ITYNSILNALLTKLKDQ-------------GIQPNMHTDTILIKGLCQSGKLEAARKVFE 500
Query: 246 EMKAR 250
++ +
Sbjct: 501 DLLVK 505
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 1/213 (0%)
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
+K Y + L ++ME P+ F LIN + A + K G+EP+ T
Sbjct: 81 SKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIIT 140
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
N + +C +I+ A D++ G + +Y +++ L K G T A + +R+
Sbjct: 141 LNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVD 200
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
K + Y V+ + V+ A ++ EM A+ + P + YS LI KL
Sbjct: 201 GKL-VQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKL 259
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
DA F +M+ I+P F+ L EG
Sbjct: 260 KDAIDLFNKMILENIKPDVYTFNILVDGFCKEG 292
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 47/214 (21%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+K + + L+D C + V +A+++F+ M +R ++ SY I++ G+ + K
Sbjct: 339 MMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKK 398
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM PDVV+Y +I+ C + + A +L EM
Sbjct: 399 VDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMH------------- 445
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
RG P TYN+++ A ++ +++ G
Sbjct: 446 ----------------------DRGQPPNIITYNSILNA------------LLTKLKDQG 471
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
I PN T I++ L ++G+ E A VF+ + K
Sbjct: 472 IQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 156/340 (45%), Gaps = 36/340 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ L +N LI+ C+ + A + KM K ++P I + + LL G+ K
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 61 LLSMNEVYREMKDDGFEPD-----------------------------------VVSYGI 85
+ + +M + G+ PD +V+YG+
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++N C D A L +MEA + IF T+I+ L + + +AL F + + +G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P TY++++ C R +DA +++ +M + I PN T++ ++ +K G+ EA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ M ++ +P + TY ++ FC + ++D A ++++ M ++ P + Y+TLI
Sbjct: 276 KLHDDMIKRS-IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
C +++D + F+EM G+ ++ L Q L +G
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 142/278 (51%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L + +++ LCK ++ A + +KM+ + + D+ + +++ + +++
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++EM+ G P+VV+Y +I+ CS R+ +A +L +M P+ F LI+
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E + EA + KR +P+ TYN+++ +C R++ A +M + M P+
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ ++ K+ R E+ +F+ MS + TV TY +++ ++ D A +++
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV-TYTTLIQGLFHDGDCDNAQKVF 383
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+M + GV P + YS L++ LC+ KL+ A + F M
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 148/304 (48%), Gaps = 2/304 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + ++ LI LC A ++ M +++ +P++ ++ L++ + ++
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +M +PD+ +Y +IN C R D+A ++F M + +C P + T
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G KR+ + + F + RG + TY ++ ++A ++ +M G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY I+L L G+ E+A VF M +K + + Y ++ C +VD
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ + +GV P + Y+T+I+ LC + L +A ++M + G P ++ L +A
Sbjct: 450 WDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Query: 301 -LRD 303
LRD
Sbjct: 510 HLRD 513
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 128/270 (47%), Gaps = 1/270 (0%)
Query: 36 MKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR 95
M K R P I + LL + K + + +M+ G ++ +Y I+IN C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 96 YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
A+ L +M +PS +L+NG KR+S+A+ Q + G+ P+ T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
++ + ++A ++D M + G PN TY +V++ L K G + A+++ +M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAA 179
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
E V + ++ C VD A+ ++ EM+ +G+ P + YS+LI+ LC + DA
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ +M++ I P F+ L A EG
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 108/203 (53%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L +N LI CKS+ VE E+F +M R D +YT L++G + + +V+
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
++M DG PD+++Y I+++ C+ + ++A+E+F M+ + K +I+ T+I G+
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
++ + F +G +P TYN ++ C + +AY ++ +M++ G P++ TY
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 189 DIVLHHLIKAGRTEEAYSVFKRM 211
+ ++ ++ G + + + M
Sbjct: 504 NTLIRAHLRDGDKAASAELIREM 526
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ ++ +L + K + + S+ ++M R G + TY I++ FC +Q+ +A+
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQR-LGISHNLYTYNILINCFCRRSQISLALA 66
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ +M G P + S+L+N CH ++ DA +M+++G RP F+ L L
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 303 DEGMEETAVVLAQKI 317
AV L ++
Sbjct: 127 LHNKASEAVALVDRM 141
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P +N ++ A + + + ++M++ GI N TY+I+++ + + A ++
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
+M K G EP++ T ++ +C+ ++ A+ + D+M G P ++TLI+ L
Sbjct: 68 LGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+K +A M+ G +P + + L G + A L K++
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + +N +I LC R ++ A + KMK+ PD +Y L+ + + +
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAAS 519
Query: 65 NEVYREMKDDGFEPDVVSYGIMIN 88
E+ REM+ F D + G++ N
Sbjct: 520 AELIREMRSCRFVGDASTIGLVAN 543
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 147/288 (51%), Gaps = 1/288 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L +N L+ C++ + A+ +FD+M + ++ SY IL+ G +
Sbjct: 99 MRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGK 158
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ M+ +G P +V++ ++I+ + A + A+ F +M+A +PS +
Sbjct: 159 LKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNE 218
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + ++ A++ F K+R P TY ++GA+ ++ A+ M+ EM K G
Sbjct: 219 LIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAG 278
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ + ++Y ++LH L G+ A +F+ M K G +P Y++++ + A
Sbjct: 279 LEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSK-GVKPNNVLYDMMIYGYGREGSSYKA 337
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+R+ EM+ G++P + Y I LC+E K +A +M D G++
Sbjct: 338 LRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQ 385
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + LI E + +M++ +P++ +Y L+ W +
Sbjct: 64 MPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGE 123
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S ++ EM G +VVSY I+I C + +A +LF M PS F
Sbjct: 124 FKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNL 183
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G G ++S AL FF Q K G +P TYN ++G +C + I A R +M++
Sbjct: 184 LIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERR 243
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY I++ K + A+ + M K G E V +Y +++ C ++ A
Sbjct: 244 LAPTKVTYTILIGAFAKENEMDRAFEMLSEME-KAGLEVDVQSYGVLLHALCMEGKMMHA 302
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ M ++GV P +Y +I E A + EM G+ P + +
Sbjct: 303 RKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRL 362
Query: 301 LRDEG 305
L +EG
Sbjct: 363 LCNEG 367
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 148/314 (47%), Gaps = 10/314 (3%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYREMK 72
L+ C+S V A+ VFD M + P+ +YT L+ G+ GQ++ ++ EM+
Sbjct: 44 LVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFAL---VGEMR 100
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G EP++ +Y ++ C + A LF EM + + LI GL +L
Sbjct: 101 RGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLK 160
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A Q F ++ G P T+N ++ Y + ++++A ++M+ G+ P+ TY+ ++
Sbjct: 161 DAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELI 220
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+A A F M + PT TY I++ F ++D A + EM+ G+
Sbjct: 221 GGFCRARDIAHAIRAFSDMKERR-LAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGL 279
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+ Y L+++LC E K+ A K FQ M G++P L+ + EG A+
Sbjct: 280 EVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALR 339
Query: 313 LAQKIDKLRKTPLV 326
L I ++RK+ L+
Sbjct: 340 L---IMEMRKSGLI 350
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
R K DV + +++ C + EA +F M P+ + LI+G
Sbjct: 27 RGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVR 86
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ G+ ++ G EP TYN +VG +C + A + DEM G+ N +Y
Sbjct: 87 GQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSY 146
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+I++ L + G+ ++A +F+ M R+ G P++ T+ +++ + ++ A+ +++MK
Sbjct: 147 NILIAGLCRHGKLKDAAQLFEAM-RREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMK 205
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
A G+ P + Y+ LI C + A + F +M + + P ++ L A E +
Sbjct: 206 AAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMD 265
Query: 309 TAVVLAQKIDK 319
A + +++K
Sbjct: 266 RAFEMLSEMEK 276
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL+ ++ + L+ LC + A+++F M + P+ Y +++ G+G++ +
Sbjct: 274 MEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGS 333
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ EM+ G P+V SY + I C+ + EA L +ME + S I
Sbjct: 334 SYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESI 390
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 152/293 (51%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL L N LI LC+ ++++ A +V M + + D +Y I++ G + +
Sbjct: 462 GLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEA 521
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ +M GF+PD+ ++ +++A+C+ + +E L +M+ +P + T+I+G
Sbjct: 522 IKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG 581
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
K + +A ++ + RG +P YNA++G Y + I+ A ++ M+ GI P
Sbjct: 582 HCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPT 641
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY +++ + AG EEA ++F + +R+ + V Y I+++ +C ++ A+ +
Sbjct: 642 NVTYGSLMYWMCHAGLVEEAKTIFSQ-ARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYF 700
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+EM++RG+ P Y+TL+ + ++A K F EM+ G+ P + L
Sbjct: 701 EEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTL 753
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 133/281 (47%), Gaps = 7/281 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + +N +I CK +E A ++ M +R F PD+ ++ LL + NL M
Sbjct: 497 GIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAY---CNLGKM 553
Query: 65 NEVYR---EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
E + +MK +G +PD+VSYG +I+ HC AK +A E E+ KP+ I+ L
Sbjct: 554 EETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNAL 613
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I G G +S A+ K G +P TY +++ C + + +A + + R+ +
Sbjct: 614 IGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNV 673
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
Y I++ K G+ EA + F+ M R G P TY ++ + + + A
Sbjct: 674 DLGVIGYTIMIQGYCKLGKMVEAVAYFEEM-RSRGISPNKLTYTTLMYAYSKSGNSEEAS 732
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+++DEM GV+P Y TLI + LD + E+
Sbjct: 733 KLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAEL 773
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 133/306 (43%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ P + LCK + A ++ K + ++ + L+ G + K +
Sbjct: 427 GMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEA 486
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+V + M + G E D ++Y IMI C + +EA++L +M KP F TL++
Sbjct: 487 TKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHA 546
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ ++ E Q K G +P+ +Y ++ +C + I A + E+ G+ PN
Sbjct: 547 YCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPN 606
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ ++ + G A + M + G +PT TY ++ C+ V+ A I+
Sbjct: 607 VFIYNALIGGYGRNGDISGAIDAVETM-KSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIF 665
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+ + V + Y+ +I C K+ +A YF+EM GI P ++ L A
Sbjct: 666 SQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKS 725
Query: 305 GMEETA 310
G E A
Sbjct: 726 GNSEEA 731
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 145/332 (43%), Gaps = 37/332 (11%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKK-RRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N ++ L ++ ++ A+EVFD+M++ R + SYT +++ + + + E+ E+
Sbjct: 189 NAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELW 248
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P VV+Y ++++A C + R +EA L ME PS F LINGL +R
Sbjct: 249 RAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFG 308
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E + ++ G P YN ++G +C + A R+ DEM + P TY+++
Sbjct: 309 EVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIA 368
Query: 193 HHLIKAGRTEEAYSVFKRM--------------------SRKPGTEPTVS-TYEIV---- 227
L K G E A + + M R E VS T E+V
Sbjct: 369 KALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGM 428
Query: 228 ----------VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+R C + A+ IW + +G+ + + LI+ LC + +A K
Sbjct: 429 RPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATK 488
Query: 278 YFQEMLDIGIRPPGQLFS-NLKQALRDEGMEE 308
Q ML+ GI ++ ++ +D MEE
Sbjct: 489 VIQTMLNKGIELDSITYNIMIRGCCKDSKMEE 520
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 135/306 (44%), Gaps = 6/306 (1%)
Query: 11 PDFNRLIDTLCKS---RHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
P + LI T S + RA + F + R P IK+ LE + L + EV
Sbjct: 148 PSSDFLIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREV 207
Query: 68 YREMKDD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM++ + SY MI A C A + D E+ E+ +P+ + L++ L
Sbjct: 208 FDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALC 267
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
R+ EA + G+ ++ G P T+ ++ R + ++ EM + G+ PN
Sbjct: 268 KSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEV 327
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y+ ++ + G +A +F M K +PT TY ++ + C +++ A RI ++
Sbjct: 328 IYNELIGWHCRKGHCSQALRLFDEMVLKK-MKPTAVTYNLIAKALCKEGEMERAERILED 386
Query: 247 MKARGVLPVMHMYSTLINSLCHED-KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
M + G+ +++T++ L +L+ EM+ G+RP L + + L G
Sbjct: 387 MLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGG 446
Query: 306 MEETAV 311
+ AV
Sbjct: 447 KHQEAV 452
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 136/301 (45%), Gaps = 24/301 (7%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G+ +N LI C+ H +A +FD+M ++ P +Y ++ K
Sbjct: 317 MEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLI------AKA 370
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCS------------AKRYDEAVELFREMEA 108
L E+ R + D++S G+ + HC +R + V + EM
Sbjct: 371 LCKEGEMERAER---ILEDMLSIGMTV--HCGLFNTVVAWLLQRTRRLESVVSITNEMVT 425
Query: 109 TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIND 168
+P+ + + L + EA+ + ++ +G T NA++ C + +
Sbjct: 426 RGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKE 485
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A +++ M GI ++ TY+I++ K + EEA + M+R+ G +P + T+ ++
Sbjct: 486 ATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRR-GFKPDLFTFNTLL 544
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+C +++ + D+MK G+ P + Y T+I+ C + A +Y E++D G++
Sbjct: 545 HAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLK 604
Query: 289 P 289
P
Sbjct: 605 P 605
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
G+ C R DA+R++ G P+ +T + L L++AG+ + A VF M
Sbjct: 164 GSLC---RAADAFRVLSSR---GAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNV 217
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
+Y +++ C +VD + E+ G+ P + Y+ L+++LC ++++A +
Sbjct: 218 ALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFR 277
Query: 278 YFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDKLRKTP 324
M G+ P F L L R E E +VL Q++++L +P
Sbjct: 278 LKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVL-QEMEQLGVSP 324
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 184 NTRTYDIVLHHLIKA---GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+T + D ++H I + G A F+ +S + G P++ T + Q+D A
Sbjct: 146 STPSSDFLIHTFITSPAQGSLCRAADAFRVLSSR-GAPPSIKTCNAFLEALVRAGQLDAA 204
Query: 241 MRIWDEMK-ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
++DEM+ +R V + Y+ +I +LC K+D + E+ G++P ++ L
Sbjct: 205 REVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMD 264
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLV 326
AL G E A L ++++ TP V
Sbjct: 265 ALCKSGRVEEAFRLKGRMEQGGMTPSV 291
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I CK + A F++M+ R P+ +YT L+ + + N ++++ EM
Sbjct: 680 YTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 739
Query: 73 DDGFEPDVVSYGIMINAHCS-AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
G PD ++YG +I A CS D+ + E+ + ++ L NG+ +
Sbjct: 740 GSGVIPDNITYGTLI-ARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNGINA 794
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 145/318 (45%), Gaps = 1/318 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ +I++LC V+ A K+ K PD ++T L+ G +
Sbjct: 71 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 130
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M +GF+P+VV+YG +IN C ++ EA +F EM P+ + +
Sbjct: 131 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 190
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+GL + P+ T N VV A C + +A+ ++D M G
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ ++ + A VF M K +S Y ++ +C VD A
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS-YNTLINGYCKIQSVDKA 309
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M +++EM + + P Y+TLI+ LCH +L DA F EM+ G P + L
Sbjct: 310 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 369
Query: 301 LRDEGMEETAVVLAQKID 318
L + A+ L + I+
Sbjct: 370 LCKNRHLDKAMALLKAIE 387
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 156/368 (42%), Gaps = 42/368 (11%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G + + F LI LC + A +FDKM F P++ +Y L+ G + + +
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ EM G P++V+Y +I+ C + L EM + P T++
Sbjct: 168 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVV 227
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA--------------------------- 155
+ L E ++EA RG EP TYNA
Sbjct: 228 DALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCV 287
Query: 156 --------VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
++ YC ++ A + +EM + + PNT TY+ ++H L GR ++A S+
Sbjct: 288 ANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISL 347
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
F M + G P + TY + C N +D AM + ++ P + +Y+T+++ +C
Sbjct: 348 FHEMVAR-GQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 406
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP--- 324
+L+DA F + G++P ++ + L +G+ A L +++K +P
Sbjct: 407 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 466
Query: 325 ---LVDRG 329
L+ RG
Sbjct: 467 TYNLITRG 474
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 9/319 (2%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DFNRL+ ++ K++H + +M PD+ + I++ + ++
Sbjct: 47 DFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKI 106
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G +PD ++ +I C + EA+ LF +M +P+ + TLINGL ++++
Sbjct: 107 LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQV 166
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+EA F + +G P TYN+++ C +M+EM I P+ T + V
Sbjct: 167 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 226
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K G EA+ V M + G EP V TY ++ C +VD+A++++D M +
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHR-GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 285
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ + Y+TLIN C +D A F+EM + P ++ L L G + A+
Sbjct: 286 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 345
Query: 312 VLAQKIDKLRKTPLVDRGQ 330
L + +V RGQ
Sbjct: 346 SLFHE--------MVARGQ 356
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 134/275 (48%), Gaps = 14/275 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG+ ++ N LI++ C R + A V K+ K F PD+ +Y L+ G +
Sbjct: 607 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK--- 663
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
M G PD+ +Y +I+A C+ + L EM + P+ +F T
Sbjct: 664 ----------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 713
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ L E ++ A KRG EP+ TY A++ +C +++A ++ D M G
Sbjct: 714 VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 773
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN R+Y+I+++ + R ++A + ++MS + TV TY ++ C+ ++ A
Sbjct: 774 CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTV-TYNTLIHGLCHVGRLQHA 832
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+ ++ EM A G +P + Y L++ LC L +A
Sbjct: 833 IALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEA 867
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 4/304 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD N ++D LCK V A +V D M R +P++ +Y L++G + + +
Sbjct: 217 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 276
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+ M +V+SY +IN +C + D+A+ LF EM P+ + TLI+GL
Sbjct: 277 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLC 336
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
RL +A+ F + RG P+ TY + C + ++ A ++ + P+ +
Sbjct: 337 HVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 396
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y +L + +AG E+A +F +S K G +P V TY I++ C + A +++ E
Sbjct: 397 IYTTILDGMCRAGELEDARDLFSNLSSK-GLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 455
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G P Y+ + ++ + +EML G + L L D+G+
Sbjct: 456 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 515
Query: 307 EETA 310
+++
Sbjct: 516 DQSV 519
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 133/278 (47%), Gaps = 1/278 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N LI LC + + ++M + P++ ++ +++ ++ +
Sbjct: 668 GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIA 727
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++V M G EPDVV+Y +++ HC DEAV++F M C P+ + LING
Sbjct: 728 HDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILING 787
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+R+ +A+ Q +G + TYN ++ C R+ A + EM G P+
Sbjct: 788 YCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 847
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY I+L +L K EA + K + + + Y I + C +++ A ++
Sbjct: 848 LVTYRILLDYLCKNHHLAEAMVLLKAI-EGSNLDADILVYNIAIDGMCRAGELEAARDLF 906
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ ++G+ P + Y+ +I+ LC LD+A K F++M
Sbjct: 907 SNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 132/307 (42%), Gaps = 14/307 (4%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF +L+ ++ K +H + +M PD+ + IL+ + + L V ++
Sbjct: 583 DFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKL 642
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
GF+PDVV+YG ++N C +M P + +LI+ L +
Sbjct: 643 LKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCNLCEW 689
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ P ++ VV A C I A+ ++D M K G+ P+ TY +
Sbjct: 690 KHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTAL 749
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ +EA VF M K G P V +Y I++ +C ++D AM + ++M +G
Sbjct: 750 MDGHCLRSEMDEAVKVFDTMVHK-GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 808
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
++ Y+TLI+ LCH +L A F EM+ G P + L L A+
Sbjct: 809 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 868
Query: 312 VLAQKID 318
VL + I+
Sbjct: 869 VLLKAIE 875
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 135/314 (42%), Gaps = 24/314 (7%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P FN L D L F++M P +T LL + K+ ++ + +
Sbjct: 557 PHFNTLDDALSS----------FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQ 606
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M G PDV + I+IN+ C +R A + ++ +P + TL+NGL
Sbjct: 607 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC---- 662
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
+ +G P+ TYN+++ A C +++EM I PN +
Sbjct: 663 ---------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 713
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
V+ L K G A+ V M ++ G EP V TY ++ C +++D A++++D M +
Sbjct: 714 VVDALCKEGMIAIAHDVVDMMIKR-GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 772
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G +P + Y+ LIN C ++D A ++M G+ ++ L L G + A
Sbjct: 773 GCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHA 832
Query: 311 VVLAQKIDKLRKTP 324
+ L ++ + P
Sbjct: 833 IALFHEMVASGQIP 846
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ ++ + L+D C ++ A +VFD M + P+++SY IL+ G+ Q +
Sbjct: 734 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 793
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M G D V+Y +I+ C R A+ LF EM A+ P +
Sbjct: 794 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 853
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L L+EA+ + + + YN + C + + A + + G
Sbjct: 854 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 913
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ P+ RTY+I++H L K G +EA +F++M
Sbjct: 914 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ C+ + +++A + ++M + D +Y L+ G L ++ EM
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G PD+V+Y I+++ C EA+ L + +E +N ++ I+G+ L
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA---YRMMDEMRKCGIGPNTRTYD 189
A F +G +P+ TYN ++ C +++A +R MDE ++R
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQK 960
Query: 190 IVLHHLIKAGRTEEAYSV---FKRM 211
+++ I + YS+ F++M
Sbjct: 961 SLIYQKIMLPEIDLVYSISVMFEKM 985
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
+EA S F RM K P+ + ++ + + +M + G+ P ++ +
Sbjct: 27 DEALSTFNRMLHKQ-PPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+INSLCH +++D A ++L +G +P F+ L + L EG A+ L K+
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 141
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 164/326 (50%), Gaps = 9/326 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K L + LID CK +ER + + +M+++ +P++ +Y+ ++ G+ ++
Sbjct: 369 LSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGI 428
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V ++M D P+ Y I+I+ +C A + + A +L+ EM+ + K + +F
Sbjct: 429 LDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDV 488
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+N L KR+ EA + RG + Y +++ + + + + A M++EM +
Sbjct: 489 LVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKS 548
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + TY+++++ L++ G+ EA SV+ M + G P +TY I+++ +C ++D A
Sbjct: 549 IPFDVVTYNVLINGLLEHGKY-EAKSVYSGMI-EMGLAPNQATYNIMIKAYCKQGELDNA 606
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +W+EMK+ ++P +TL+ L +++ A EM +GI P + L A
Sbjct: 607 LELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNA 666
Query: 301 LRDEG-------MEETAVVLAQKIDK 319
G M E V + KI++
Sbjct: 667 SSKSGKANAVLQMHEQLVDMGLKINQ 692
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 154/355 (43%), Gaps = 29/355 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-------------------- 40
M K GL ++ +N LI+ CK ++A+ + ++ + R
Sbjct: 173 MRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNL 232
Query: 41 -FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEA 99
+ D+ +YT ++ + +Q L +Y EM +GF PDVV+Y ++N C R EA
Sbjct: 233 NLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEA 292
Query: 100 VELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
EL REM+ P+ + TLI+ L EA Q RG + +V
Sbjct: 293 QELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDG 352
Query: 160 YCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
S + +A M + K + PN+ TY ++ K G E S+ + M K P
Sbjct: 353 LFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKH-INP 411
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY ++ + +D A+ + +M + ++P ++Y+ LI+ C K + A +
Sbjct: 412 NVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLY 471
Query: 280 QEMLDIGIRPPGQLF----SNLKQALRDEGMEETAVVLAQK---IDKLRKTPLVD 327
EM G++ LF +NLK+ R + EE + + +D + T L+D
Sbjct: 472 NEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMD 526
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 149/316 (47%), Gaps = 1/316 (0%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D L+ +L + +I T CK +E A+ ++++M F PD+ +Y+ ++ G + L
Sbjct: 230 DNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRL 289
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
E+ REMK G +P+ V+Y +I++ A EA ++ + TL
Sbjct: 290 SEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTL 349
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
++GL + EA F K P + TY A++ YC + ++ EM + I
Sbjct: 350 VDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHI 409
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY +++ K G +EA +V K+M + P Y I++ +C + ++A
Sbjct: 410 NPNVITYSSIINGYTKKGILDEAINVMKKMLDQ-NIIPNAYVYAILIDGYCKAGKQEIAT 468
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
+++EMK G+ ++ L+N+L ++D+A + +++ G+ +++L
Sbjct: 469 DLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGF 528
Query: 302 RDEGMEETAVVLAQKI 317
G E A+ + +++
Sbjct: 529 FKAGKESAALNMVEEM 544
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 150/330 (45%), Gaps = 22/330 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG------WGQQ 58
G +++ FN LID CK+ + A ++ ++M+K DI SY L+ G + +
Sbjct: 142 GTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKA 201
Query: 59 KNLLSMNEVYREMKDDGF---------------EPDVVSYGIMINAHCSAKRYDEAVELF 103
K+LL R +KD F E D+++Y +I+ +C +EA L+
Sbjct: 202 KSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALY 261
Query: 104 REMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
EM P + +++NGL + RLSEA + + KK G +P Y ++ + +
Sbjct: 262 EEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKA 321
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+A+ ++ G+ + ++ L K+ + +EA +F+ +S K P T
Sbjct: 322 GSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALS-KLNLIPNSIT 380
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
Y ++ +C ++ + EM+ + + P + YS++IN + LD+A ++ML
Sbjct: 381 YTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKML 440
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
D I P +++ L G +E A L
Sbjct: 441 DQNIIPNAYVYAILIDGYCKAGKQEIATDL 470
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 132/293 (45%), Gaps = 2/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + ++ L+D K+ A + ++M ++ D+ +Y +L+ G +
Sbjct: 513 GLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EA 571
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
VY M + G P+ +Y IMI A+C D A+EL+ EM++ PS TL+ G
Sbjct: 572 KSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVG 631
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + +A+ + G P + ++ A S + N +M +++ G+ N
Sbjct: 632 LSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKIN 691
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y+ ++ + T++A SV K M R TV TY ++R +C ++ V A+ +
Sbjct: 692 QEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTV-TYNALIRGYCESSHVKKALATY 750
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+M GV P + Y+ L+ L + + + F +M + G+ P + L
Sbjct: 751 TQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTL 803
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 134/297 (45%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL +N +I CK ++ A E++++MK + P + L+ G +
Sbjct: 578 MIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGE 637
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V EM G P++V + +++NA + + + +++ ++ K + +
Sbjct: 638 IEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNN 697
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + +A + GF + TYNA++ YC S + A +M G
Sbjct: 698 LIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEG 757
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+++L L+ AG E +F +M ++ G P STY+ ++ + +
Sbjct: 758 VSPNIVTYNLLLGGLLGAGLMAERDELFDKM-KENGLNPDASTYDTLISGYGKIGNKKES 816
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+R++ EM A+G +P Y+ LI+ K+D A + EM G+ P + L
Sbjct: 817 IRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDIL 873
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 96/189 (50%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
GLK +N LI C+ R ++A V M + F D +Y L+ G+ + ++
Sbjct: 686 MGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKK 745
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
Y +M ++G P++V+Y +++ A E ELF +M+ P + TLI+
Sbjct: 746 ALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLIS 805
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G G E+++ + + +GF P+ TYN ++ + +++ A +++EM+ G+ P
Sbjct: 806 GYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPP 865
Query: 184 NTRTYDIVL 192
++ TYDI++
Sbjct: 866 SSSTYDILI 874
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 153/362 (42%), Gaps = 46/362 (12%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K + L +N+LI V + +++ +M P++ ++ +L+ W + N
Sbjct: 1 MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-------EATNCKP 113
L+ ++ R + E D V+Y +I C ++A M + C
Sbjct: 61 LILALDLLRNVD---VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117
Query: 114 SPHIFCTLINGLGS-EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
FC + GL +R+ + L G K + +N ++ YC + ++ A +
Sbjct: 118 LVKGFCRI--GLAKYGERIMDNLVSGGTCK------DVIGFNTLIDGYCKAGEMSLALDL 169
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV----------- 221
++ MRK G+ + +Y+ +++ K G ++A S+ +S G + +V
Sbjct: 170 VERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKD 229
Query: 222 ---------STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
TY ++ +C ++ A +++EM G LP + YS+++N LC + +L
Sbjct: 230 DNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRL 289
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA-------VVLAQKIDKLRKTPL 325
+A + +EM +G+ P ++ L +L G A VV +D + T L
Sbjct: 290 SEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTL 349
Query: 326 VD 327
VD
Sbjct: 350 VD 351
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 133/317 (41%), Gaps = 48/317 (15%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNE---- 66
N L+ L ++ +E+A V ++M P++ + +LL G+ +L M+E
Sbjct: 626 NTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVD 685
Query: 67 ----------------------------VYREMKDDGFEPDVVSYGIMINAHCSAKRYDE 98
V + M DGF D V+Y +I +C + +
Sbjct: 686 MGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKK 745
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
A+ + +M P+ + L+ GL ++E + F + K+ G P+A TY+ ++
Sbjct: 746 ALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLIS 805
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
Y ++ R+ EM G P T TY++++ K G+ ++A + M + G
Sbjct: 806 GYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVR-GVP 864
Query: 219 PTVSTYEIVVRMFC-YNAQVDM-----------AMRIWDEMKARGVLPVMHMYSTLINSL 266
P+ STY+I++ +C + D+ A + EM +G +P + + ++
Sbjct: 865 PSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTF 924
Query: 267 CHEDKLDDACKYFQEML 283
K+ DA K +E+
Sbjct: 925 ARPGKMLDAEKLLKEIF 941
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 12/223 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + +N LI C+S HV++A + +M P+I +Y +LL G
Sbjct: 718 MIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGL 777
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E++ +MK++G PD +Y +I+ + E++ L+ EM A P +
Sbjct: 778 MAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNV 837
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC------------WSMRIND 168
LI+ ++ +A + + + RG P + TY+ ++ +C + D
Sbjct: 838 LISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTD 897
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
A ++ EM G P T + + G+ +A + K +
Sbjct: 898 AKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEI 940
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 150/327 (45%), Gaps = 36/327 (11%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L FN L+D CK+ + RA EV ++M + PD+ +YTIL+ G + + +
Sbjct: 270 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLL 329
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING---- 124
E+ G+ PDV++Y +++ C + +EA +L +EM C+ ++ +L++G
Sbjct: 330 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRA 389
Query: 125 -------------------------------LGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
L + +S+A+ RG+ P+ TY
Sbjct: 390 GNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTY 449
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
N ++ C + R+ +A + DEM G PN T V+ L + GR ++A+S+ MSR
Sbjct: 450 NTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR 509
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
K P V Y ++ C + ++D A + D M+ +GV Y LI S+ H ++
Sbjct: 510 KRHA-PNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVA 568
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQA 300
+A + EM+ G P G L++A
Sbjct: 569 EAMAMYDEMVARGFLPDGSTSKTLEEA 595
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 158/319 (49%), Gaps = 6/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM--KKRRFDPDIKSYTILLEGWGQQ 58
M+ +K E+ +N +I LCKS ++E+A+E+ ++M K + PDI +Y L+ + +
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ +MK G PDV++ I+++ C +EA+E+ M+ P +
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++I+ L ++ EA + K P+ T+N ++ +C + + A +++EM +
Sbjct: 243 NSIIHALCVAGKVVEAAEIL---KTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
I P+ TY I+++ L + G+ + A+ + + + R+ G P V Y +V C + +++
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ-GYIPDVIAYTSLVDGLCKSGEIE 358
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A ++ EM RG + MYS+L++ C + A + EM+ I + PP ++ +
Sbjct: 359 EAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVL 418
Query: 299 QALRDEGMEETAVVLAQKI 317
L +G AV L +
Sbjct: 419 GGLIKDGSISKAVSLISDL 437
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 153/332 (46%), Gaps = 13/332 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ +N L+D L KS H R +V+ + P++ ++ IL+ G + +
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E R + + PDV + ++I+ D+AV+LF ME++ KP + T+I+G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 125 LGSEKRLSEALQFFGQSKKRGFE--PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
L L +A + + ++G + P+ TYN ++ A+ + RI +A ++M+ GI
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ T +I++ + K G EEA + M + G P V TY ++ C +V A
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGM-KLAGPVPDVITYNSIIHALCVAGKVVEAAE 260
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
I M P + ++TL++ C L A + +EM I P ++ L L
Sbjct: 261 ILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 317
Query: 303 DEGMEETAVVLAQKI-------DKLRKTPLVD 327
G + A L ++I D + T LVD
Sbjct: 318 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVD 349
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 145/317 (45%), Gaps = 8/317 (2%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D L +PD +N +I LC + V A E+ M PD+ ++ LL+G+ +
Sbjct: 227 LDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCK 283
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
L EV EM + PDV++Y I++N C + A L E+ P
Sbjct: 284 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 343
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +L++GL + EA + + RG Y+++V YC + ++ A ++ EM
Sbjct: 344 YTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ P TY+IVL LIK G +A S+ + + G P V TY ++ C +V
Sbjct: 404 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR-GYVPDVVTYNTLIDGLCKANRV 462
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A + DEM +RG P +++ LC ++DDA EM P ++++L
Sbjct: 463 REACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSL 522
Query: 298 KQAL-RDEGMEETAVVL 313
L + + M++ +VL
Sbjct: 523 IDGLCKSDRMDDACMVL 539
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 144/326 (44%), Gaps = 4/326 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ ++ N L+ +CK VE A E+ D MK PD+ +Y ++
Sbjct: 195 MKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGK 254
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ E+ + M PD+V++ +++ C A A+E+ EM N P +
Sbjct: 255 VVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 311
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+NGL ++ A + ++G+ P+ Y ++V C S I +A++++ EM G
Sbjct: 312 LVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG 371
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
Y ++ +AG +A + M P + TY IV+ + + A
Sbjct: 372 CRTGVVMYSSLVSGYCRAGNVHKAREILAEMV-SINMVPPLFTYNIVLGGLIKDGSISKA 430
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ + ++ ARG +P + Y+TLI+ LC +++ +AC EM G P ++
Sbjct: 431 VSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFG 490
Query: 301 LRDEGMEETAVVLAQKIDKLRKTPLV 326
L G + A L ++ + R P V
Sbjct: 491 LCRVGRVDDAWSLVVEMSRKRHAPNV 516
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 41/270 (15%)
Query: 74 DGFEPDVVSYG-----------------------------------IMINAHCSAKRYDE 98
DG++ DV SY I+I +C A +
Sbjct: 21 DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR 80
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
A+E R ++ + P +IF LI+GL + +A++ F + +PE TYN V+
Sbjct: 81 ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVIS 140
Query: 159 AYCWSMRINDAYRMMDEM-RKCG-IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
C S + A +++EM RK G P+ TY+ +++ +A R EA + F+ + G
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACA-FREKMKAAG 199
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P V T I+V C + V+ A+ I D MK G +P + Y+++I++LC K+ +A
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAA 259
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
+ + M P F+ L GM
Sbjct: 260 EILKTM---SCSPDLVTFNTLLDGFCKAGM 286
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 146/313 (46%), Gaps = 36/313 (11%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL ++ +N LI LCK+ V A+ KM ++PD +Y +++G+ + + +
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNA 339
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ R+ GF PD +Y +IN C D A+ +F E KP+ + TL+ G
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG-------------------------- 158
L + + +AL+ + + G P+ TYN V+
Sbjct: 400 LSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPD 459
Query: 159 ---------AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
YC +++++A ++D M G+ P+ TY+ +L+ L KAG+ E+ FK
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFK 519
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
M K G P + TY I+ FC +V+ A+ + +EM+ +G+ P + + TL+ C
Sbjct: 520 LMMEK-GCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDN 578
Query: 270 DKLDDACKYFQEM 282
LD A + F+ +
Sbjct: 579 GDLDGAYQLFKRV 591
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 168/358 (46%), Gaps = 35/358 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK- 59
M G+ ++ FN+LI TLC+ HV+ ++ + +K+ KR P++ + I ++G+ Q+
Sbjct: 207 MLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAM 266
Query: 60 -----------------NLLSMNEV----------------YREMKDDGFEPDVVSYGIM 86
++++ N + R+M ++G+EPD +Y +
Sbjct: 267 LNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSI 326
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
I+ +C A ++ R+ P +C+LINGL + + A+ F ++ ++G
Sbjct: 327 IDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGL 386
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+P N +V I A ++M+EM + G P+ TY++V++ L K G +A +
Sbjct: 387 KPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADN 446
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ K G P V T+ ++ +C ++D A+ I D M GV P + Y++++N L
Sbjct: 447 LVIDAIAK-GHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGL 505
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
C K +D F+ M++ G P ++ L ++ E A+ L +++ TP
Sbjct: 506 CKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTP 563
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 154/324 (47%), Gaps = 2/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD F + + +N +++ L + R+ ++A +V+ +M+ + PD+ ++TI ++ + +
Sbjct: 102 MDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSR 161
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G E V+Y +I EA ELF EM P F
Sbjct: 162 PHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNK 221
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L + + E+ + + KRG P T N + +C +N+A R++D + + G
Sbjct: 222 LIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR-G 280
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY+ ++ L K + EA ++M + G EP TY ++ +C + A
Sbjct: 281 LTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNE-GYEPDGFTYNSIIDGYCKLGMMQNA 339
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+I + +G +P Y +LIN LC + +D A F E ++ G++P L + L +
Sbjct: 340 DQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKG 399
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +G+ A+ L ++ + +P
Sbjct: 400 LSQQGLILQALKLMNEMSENGCSP 423
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 5/289 (1%)
Query: 5 GLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
K +PD + LI+ LC+ ++RA VF++ ++ P++ L++G QQ +
Sbjct: 347 AFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLI 406
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
L ++ EM ++G PD+ +Y ++IN C +A L + A P F TL
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+G + +L A++ + G P+ TYN+++ C + + D M + G
Sbjct: 467 IDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGC 526
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY+I+ KA + EEA ++ + M K G P V + +++ FC N +D A
Sbjct: 527 VPNIITYNILTESFCKARKVEEALNLIEEMQNK-GLTPDVVNFGTLMKGFCDNGDLDGAY 585
Query: 242 RIWDEMKARGVLP-VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+++ + + + Y+ +IN+ + ++ A K F +M + G P
Sbjct: 586 QLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSP 634
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 139/297 (46%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK L N L+ L + + +A ++ ++M + PDI +Y +++ G + +
Sbjct: 385 GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDA 444
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ + + G PDV ++ +I+ +C + D A+E+ M P + +++NG
Sbjct: 445 DNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNG 504
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + + F ++G P TYN + ++C + ++ +A +++EM+ G+ P+
Sbjct: 505 LCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPD 564
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ ++ G + AY +FKR+ + T++TY I++ F ++MA +++
Sbjct: 565 VVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLF 624
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++M G P + Y +I+ C ++ + ++ G+ P F + L
Sbjct: 625 NKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 135/293 (46%), Gaps = 8/293 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQE-VFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M + G ++ +N +I+ LCK V A V D + K PD+ ++ L++G+ ++
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHL-PDVFTFNTLIDGYCKKL 474
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L + E+ M + G PDV++Y ++N C A +Y++ + F+ M C P+ +
Sbjct: 475 KLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYN 534
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM---MDEM 176
L +++ EAL + + +G P+ + ++ +C + ++ AY++ +DE
Sbjct: 535 ILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
K TY+I+++ A +F +M G P TY +++ FC
Sbjct: 595 YK--FSHTIATYNIMINAFAGKLNMNMAEKLFNKMCEN-GFSPDSYTYRVMIDGFCKTGN 651
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ +G++P + + ++N LC + ++ +A M+ GI P
Sbjct: 652 INSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVP 704
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 139/307 (45%), Gaps = 3/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKS-YTILLEGWGQQKNLLS 63
G K L + +I+ L E +EV + + + ++ Y + +G++ +
Sbjct: 35 GFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRNYGRKGKIQE 94
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+V+ M EP V SY ++N + +D+A +++ M P + F +
Sbjct: 95 AVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMK 154
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
R A + +G E A Y V+G + +A+ + +EM GI P
Sbjct: 155 SFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICP 214
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ ++ ++H L + G +E+ + ++ ++ G P + T I ++ FC A ++ A+R+
Sbjct: 215 DIMAFNKLIHTLCRKGHVQESERLLNKVLKR-GVSPNLFTVNIFIQGFCQRAMLNEAIRL 273
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
D + RG+ P + Y+TLI LC K+ +A Y ++M++ G P G ++++
Sbjct: 274 LDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCK 332
Query: 304 EGMEETA 310
GM + A
Sbjct: 333 LGMMQNA 339
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 103/220 (46%), Gaps = 1/220 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ +N +++ LCK+ E F M ++ P+I +Y IL E + + + +
Sbjct: 490 GVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEA 549
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLIN 123
+ EM++ G PDVV++G ++ C D A +LF+ + E + + +IN
Sbjct: 550 LNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMIN 609
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+ ++ A + F + + GF P++ TY ++ +C + IN Y + + G+ P
Sbjct: 610 AFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIP 669
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
+ T+ VL+ L R EA + M K V+T
Sbjct: 670 SLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVVNT 709
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 155/312 (49%), Gaps = 3/312 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ F L++ N L+DTLCK R VE+A+ +F ++K P+ ++ I + GW +
Sbjct: 172 LGNFELEKNTESMNLLLDTLCKERKVEQARAIFLELKP-HISPNTHTFNIFIHGWCKANR 230
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EMK G P V+SY +I ++C + + EL +M+A C P+ + T
Sbjct: 231 VDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNVVTYTT 290
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD-EMRKC 179
++ L ++ EALQ + + G +P+ YNA++ + ++ +A R+ + EM K
Sbjct: 291 IMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVFEVEMPKT 350
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PNT TY+ ++ + ++A ++ + + +P + TY V++ ++D
Sbjct: 351 GVPPNTSTYNSMIAMFCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDS 410
Query: 240 AMRIWDEMKARGVLPV-MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
D+M + L + + Y+ LI+ LC +K + F+EM+ I P + + L
Sbjct: 411 LSNFLDDMVNKHHLSLDVSAYTLLIHGLCRANKCEWGYNLFEEMVGKAITPRYKTCALLL 470
Query: 299 QALRDEGMEETA 310
++ + M + A
Sbjct: 471 DEIKQKNMHDAA 482
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 104/237 (43%), Gaps = 3/237 (1%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G+E +Y +M++ K+ D+ L EM N + + L +A
Sbjct: 107 GYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGNLVRLSTV-AKAMRRLAGAGEWEDA 165
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
++ F E + N ++ C ++ A + E++ I PNT T++I +H
Sbjct: 166 VRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIFLELKP-HISPNTHTFNIFIHG 224
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
KA R +EA + M + G P V +Y +++ +C + + D+M+A+G P
Sbjct: 225 WCKANRVDEAEWTIQEM-KGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAP 283
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ Y+T++ SL ++ ++A + + M +G +P ++ L L G AV
Sbjct: 284 NVVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAV 340
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 10/233 (4%)
Query: 96 YDEAVELFREMEA-TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF---EPEAP 151
+ A+ LFR E+ + +P + +++ LG K++ + + ++ A
Sbjct: 92 WKSALGLFRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGNLVRLSTVAK 151
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ GA W DA R+ D++ + NT + +++L L K + E+A ++F +
Sbjct: 152 AMRRLAGAGEWE----DAVRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIF--L 205
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
KP P T+ I + +C +VD A EMK G P + YST+I S C +
Sbjct: 206 ELKPHISPNTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSN 265
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ +M G P ++ + +L E A+ +A+++ + P
Sbjct: 266 FRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKP 318
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 1/285 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ LC + V A VF M PD Y+I++ G + +
Sbjct: 147 YAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAM 206
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
GF P+V Y +I+ +CS + A+++F+ M++ C P+ + LI G ++
Sbjct: 207 GKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVE 266
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A+ + + + G P TY ++ C + A+R++ M CG+ PN T +++
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLI 326
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR EEA + +K G + Y ++ C + + D A + ++ G
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQK-GIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGF 385
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+P HMYS+LI+ LC E+KL +A +M++ G++ F+ L
Sbjct: 386 VPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTIL 430
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 1/306 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + +N LID C + +E A ++F M+ + P++++YT L+ G+ + +
Sbjct: 209 GFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERA 268
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+Y M + G P+VV+Y +I CS + A L MEA P+ LI+
Sbjct: 269 MVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDA 328
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R+ EA QF G ++G + Y +++ A C S + + A+ +M ++ G P+
Sbjct: 329 LCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPD 388
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y ++ L + + EA S+ M + G + + I++ + D I
Sbjct: 389 AHMYSSLIDGLCRENKLLEAISLLNDMI-ESGVQANAVPFTILIDKHLREFRSDSPKMIS 447
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
D M A GV P + Y+ I S C + +++DA +M+D G+RP ++ L + +
Sbjct: 448 DRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANL 507
Query: 305 GMEETA 310
G+ A
Sbjct: 508 GLVSQA 513
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 141/310 (45%), Gaps = 1/310 (0%)
Query: 8 QELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
+ L + LI+ C + + A+ + + PD +YT + G+ + +
Sbjct: 72 RNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRL 131
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ M G +Y ++ C A EA+ +F M C P H++ +++GL
Sbjct: 132 FLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCG 191
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
R EA+ + +GF P YNA++ YC + + A + M+ G PN RT
Sbjct: 192 AGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRT 251
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
Y ++ K+G+ E A ++ RM + G P V TY +++ C ++ A R+ M
Sbjct: 252 YTQLICGFCKSGKVERAMVLYSRMI-EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSM 310
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGME 307
+A G+ P LI++LC ++++A ++ ++ GI+ +++++ AL G
Sbjct: 311 EACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKF 370
Query: 308 ETAVVLAQKI 317
+ A L QKI
Sbjct: 371 DGAHNLMQKI 380
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 142/297 (47%), Gaps = 1/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + + +LI CKS VERA ++ +M + P++ +YT L++G + +
Sbjct: 240 MQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGH 299
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + M+ G P+ + ++I+A C R +EA + + K + I+ +
Sbjct: 300 LEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTS 359
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ L + A + GF P+A Y++++ C ++ +A ++++M + G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N + I++ ++ R++ + RM+ G +P V TY + +R +C + +++ A
Sbjct: 420 VQANAVPFTILIDKHLREFRSDSPKMISDRMA-AAGVKPDVVTYTVFIRSYCQDGRMEDA 478
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ +M GV P + Y+TLI + + A + M+D G +P + ++ L
Sbjct: 479 ESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVL 535
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 130/313 (41%), Gaps = 27/313 (8%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LID LCK +E AQ+ + ++ + YT +++ + + + +++ +G
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F PD Y +I+ C + EA+ L +M + + + F LI+ E R
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPK 444
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ G +P+ TY + +YC R+ DA MM +M G+ PN TY+ ++
Sbjct: 445 MISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGY 504
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF----CYNAQVDMAMRIW------- 244
G +A+S K M G +P +Y +++ + Y+ V ++ +W
Sbjct: 505 ANLGLVSQAFSSLKNMIDN-GCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKV 563
Query: 245 -----DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN--- 296
+E+ ++Y I L D+L++A + M + P +++
Sbjct: 564 LEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIE 623
Query: 297 -------LKQALR 302
LK+ALR
Sbjct: 624 CCYRMKLLKEALR 636
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 121/332 (36%), Gaps = 54/332 (16%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+K + +ID LCKS + A + K+ F PD Y+ L++G ++ LL
Sbjct: 349 GIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEA 408
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M + G + + V + I+I+ H R D + M A KP + I
Sbjct: 409 ISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRS 468
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ R+ +A Q G P TYN ++ Y ++ A+ + M G PN
Sbjct: 469 YCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPN 528
Query: 185 TRTYDIVL---------HHLI--------------------------------------- 196
+Y ++L H L+
Sbjct: 529 DESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIR 588
Query: 197 ---KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ-VDMAMRIWDEMKARGV 252
K R EEA S M + P+ Y ++ CY + + A+R D M R
Sbjct: 589 CLSKVDRLEEAKSFLVGM-QSANLTPSEDVYTCMIEC-CYRMKLLKEALRFLDSMVKRNY 646
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
LP + Y +I +LC E A F ++L
Sbjct: 647 LPRLESYRFIICALCEEGSFHTAKSIFGDILS 678
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 110/283 (38%), Gaps = 19/283 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+K ++ + I + C+ +E A+ + +M P++ +Y L++G+
Sbjct: 450 MAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGL 509
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAV----------------ELFR 104
+ + M D+G +P+ SY +++ Y + V EL
Sbjct: 510 VSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLE 569
Query: 105 EMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
E+ C + +++ I L RL EA F + P Y ++ C+ M
Sbjct: 570 EVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIEC-CYRM 628
Query: 165 RI-NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVST 223
++ +A R +D M K P +Y ++ L + G A S+F + K ++
Sbjct: 629 KLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIA- 687
Query: 224 YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
++I++ R+ M+ + P +YS L +
Sbjct: 688 WKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEI 730
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 146/295 (49%), Gaps = 4/295 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLL 62
FGL + L+ C+ + A VF+KM K+ P+ +Y+IL+ G + L
Sbjct: 202 FGLDTHVC--TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLE 259
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ +EM + G +P +Y ++I A C D+A+++ EM C P+ H + LI
Sbjct: 260 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILI 319
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L E ++ EA F + K G P T+NA++ YC + A++++ M K
Sbjct: 320 DRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK 379
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN RTY+ ++ L + ++ +A+ + +R+ G P TY I+V FC Q++MA
Sbjct: 380 PNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN-GLLPDRVTYNILVDGFCKEGQLNMAFN 438
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I++ M + G+ P ++ LI+ LC +L+ A M+ GI F+ L
Sbjct: 439 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 493
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N L+D CK + A +F+ M +PD ++T L++G + L N
Sbjct: 414 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 473
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M G D V++ +I+ HC + + LF M C + H F ++ LG
Sbjct: 474 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 533
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ +L+EA G+ K G P T+ ++ +C + + +M++ M++ G PN
Sbjct: 534 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 593
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I+++ L GR EEA ++ MS G P TY ++V+ ++D A +I
Sbjct: 594 TYTIIINGLCNNGRVEEAETILFSMS-SFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 652
Query: 247 MKARGVLPVMHMYSTLINSL 266
M G P H+YS L++
Sbjct: 653 MVKNGCQPNSHIYSALLSGF 672
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 146/332 (43%), Gaps = 36/332 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + FN LI+ CK V A ++ M+K P+I++Y L+EG +
Sbjct: 338 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 397
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R + D+G PD V+Y I+++ C + + A +F M + +P F
Sbjct: 398 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 457
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC------------------- 161
LI+GL RL +A G K+G + T+ A++ +C
Sbjct: 458 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 517
Query: 162 ----------------WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++N+A M+ +M K G+ P+ T+ I++ +AG T +
Sbjct: 518 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 577
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ +RM ++ G P V TY I++ C N +V+ A I M + GV P Y+ L+ +
Sbjct: 578 KMLERM-KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 636
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+LD A + M+ G +P ++S L
Sbjct: 637 HVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 668
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 138/298 (46%), Gaps = 10/298 (3%)
Query: 2 DKFGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ F LKQE+ + + LI C ++A ++ D+M + P++ +YTIL+
Sbjct: 260 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILI 319
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+ ++ + N V+R+M G P ++++ +IN +C A +L ME NCK
Sbjct: 320 DRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK 379
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ + L+ GL + +A + G P+ TYN +V +C ++N A+ +
Sbjct: 380 PNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNI 439
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ M G+ P+ T+ ++ L K GR E+A + M +K G T+ ++ C
Sbjct: 440 FNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK-GISLDEVTFTALIDGHC 498
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ +++ M L H ++ +++L + KL++A +M+ G+ P
Sbjct: 499 KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 556
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 18/327 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + F LID CK + +F+ M + R ++ L+ G+
Sbjct: 478 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 537
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N + +M G P VV++ I+I HC A ++++ M+ C P+ + +
Sbjct: 538 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 597
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL + R+ EA G P TY +V A+ + R++ A++++ M K G
Sbjct: 598 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 657
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSV-------FKRMSRKPGTEPTVSTYEIVVRMFCY 233
PN+ Y +L + + A ++ + +S + +S++ V R+
Sbjct: 658 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSH--VFRLM-- 713
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
VD A++I DE+K GV P +Y+ L+ LC E ++ +A + Q+M+ G+ P +
Sbjct: 714 --DVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI 770
Query: 294 FSNLKQALR----DEGMEETAVVLAQK 316
S ++ + D +E +VL K
Sbjct: 771 SSIIEHYCKTCKYDNCLEFMKLVLDNK 797
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 152/370 (41%), Gaps = 44/370 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + P ++ L+ L K A V+ +M F Y ++ +
Sbjct: 127 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 186
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
+ + ++ GF D ++ A+C EA +F +M + NC+P+ +
Sbjct: 187 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYS 246
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI+GL RL EA Q + ++G +P TY ++ A C + A +M+DEM
Sbjct: 247 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 306
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------- 232
PN TY I++ L + G+ EEA VF++M K G P + T+ ++ +C
Sbjct: 307 ACVPNVHTYTILIDRLCREGKIEEANGVFRKM-LKHGLCPGIITFNALINGYCKEGWVVS 365
Query: 233 -------------------YNAQVDMAMRIWDEMKA---------RGVLPVMHMYSTLIN 264
YN ++ R+ KA G+LP Y+ L++
Sbjct: 366 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 425
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQ------KI 317
C E +L+ A F M G+ P G F+ L L G +E+ +L +
Sbjct: 426 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 485
Query: 318 DKLRKTPLVD 327
D++ T L+D
Sbjct: 486 DEVTFTALID 495
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 99/257 (38%), Gaps = 37/257 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +I+ LC + VE A+ + M P+ +Y +L++ +
Sbjct: 583 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 642
Query: 61 LLSMNEVYREMKDDGFEPD------VVSYGIMINAHCSAKRYDEAVEL------------ 102
L ++ M +G +P+ ++S ++ N A+ +L
Sbjct: 643 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 702
Query: 103 -------FREM----------EATNCK-PSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
FR M E C P+ ++ L+ GL E R+ EA Q K
Sbjct: 703 NCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 762
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+ ++++ YC + + ++ M + P+ +Y V+H L GR +EA
Sbjct: 763 GLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 821
Query: 205 YSVFKRMSRKPGTEPTV 221
+ + R G E V
Sbjct: 822 QKLVSDLVRHTGIEEEV 838
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 138/287 (48%), Gaps = 1/287 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+ L FN I LC+ ++ A + + + PD+ SY L+ G+ + L+
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+M + G EP+ +Y +IN C A A ++ R+ P + +LI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL ++ ++ A+ F ++ ++GF+ YN +V + A ++M +M + G
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ TY++V++ L K G +A + K G P + T+ ++ +C +D A+
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAK-GCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
I D M + G+ P + Y+TL+N LC KLD+ F+ ML+ G P
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 135/285 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N L+ L K V +A ++ M + PDI +Y +++ G + L
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N + + G PD+ ++ +I+ +C + D+A+E+ M + P + TL+NG
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++L + F ++G P TYN ++ ++C ++++A + EM+ G+ P+
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ L G ++AY +F + ++ + + + I++ FC V MA +++
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLF 625
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+M P + Y +I+S C +D A + E + G+ P
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 137/290 (47%), Gaps = 2/290 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ +N +++ LCK + A + + + PDI ++ L++G+ +Q+N
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ M G PDV++Y ++N C A++ D V+ F+ M C P+ +
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-C 179
LI ++++SEA++ F + K RG P+ T ++ C + ++ AY + + K
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+T ++I+++ + A +F +M P TY +++ +C +D+
Sbjct: 597 KFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMG-GSDCAPDNYTYRVMIDSYCKTGNIDL 655
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A E ++G++P ++N LC +L +A M+ GI P
Sbjct: 656 AHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 143/302 (47%), Gaps = 2/302 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
V+ A VF++M +P ++SY ++ + ++VY MKD G PDV ++ I
Sbjct: 92 VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+ + C R A+ L M C+ + +C +I+G E EA F + K+G
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ T+N ++ C + ++ ++ ++ K G+ PN T++I + L + G +EA
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ + + + G P V +Y ++ FC ++++ A +M GV P Y+T+IN
Sbjct: 272 RLLESIVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTP 324
C + +A K ++ + G P +S+L L ++G M V + ++K K
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390
Query: 325 LV 326
++
Sbjct: 391 II 392
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 146/321 (45%), Gaps = 40/321 (12%)
Query: 28 RAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD--DGFEPDVVSYG 84
A ++F+++K F +++Y ++E G +M +V EM+ D + V G
Sbjct: 22 NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIG 81
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
IM + + + EAV +F M+ +C+PS + ++N L S+A + + + K
Sbjct: 82 IMRD-YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI 140
Query: 145 GFEPEAPTYNAVVGAYCWSMR-------IND----------------------------A 169
G P+ T+ + ++C + R +N+ A
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
Y + DEM K GI P+ T++ ++H L K G +E+ +F ++ ++ G P + T+ I ++
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR-GVCPNLFTFNIFIQ 259
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C +D A R+ + + + G+ P + Y+TLI C KL +A Y +M++ G+ P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319
Query: 290 PGQLFSNLKQALRDEGMEETA 310
++ + GM + A
Sbjct: 320 NEFTYNTIINGFCKAGMMQNA 340
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 140/324 (43%), Gaps = 36/324 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLE------- 53
MD + + + +N +++ L + + +A +V+ +MK PD+ ++TI ++
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGR 161
Query: 54 ------------GWGQQKNLLSMNEV----------------YREMKDDGFEPDVVSYGI 85
G G + N +S V + EM G PD++++
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ C E+ +LF ++ P+ F I GL + + EA + G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ +YN ++ +C ++ +A + +M G+ PN TY+ +++ KAG + A
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ + K G P TY ++ C + ++ AM ++ E +G + +Y+TL+
Sbjct: 342 KILRDAMFK-GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400
Query: 266 LCHEDKLDDACKYFQEMLDIGIRP 289
L + + A + ++M++ G P
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSP 424
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 58 QKNLLSMNEVYREMK-DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSP 115
Q + L+ +++ ++K +DGF+ + +Y MI +++ ++ EM + + K
Sbjct: 17 QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLE 76
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
++ ++ G + ++ EA+ F + EP +YNA++ + A+++
Sbjct: 77 GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M+ GI P+ T+ I + GR A + M + VS ++ + N
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
Q++ A ++DEM +G+ P + ++ LI+ LC + + ++ K F +++ G+ P F+
Sbjct: 197 QIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTP 324
Q L +G + A L + I TP
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTP 284
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 36/181 (19%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKS----------------- 47
G + +N LI++ CK R V A E+F +MK R PDI +
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKA 585
Query: 48 -------------------YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
+ I++ + ++ N+ +++ +M PD +Y +MI+
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
++C D A E + PS ++N L RLSEA+ + G P
Sbjct: 646 SYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Query: 149 E 149
E
Sbjct: 706 E 706
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 144/301 (47%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL +N LID C + +A D+M +R P + +Y +L+ +
Sbjct: 332 MKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGK 391
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + ++M D G PD ++Y I+IN +C +A L EM + +P+ + +
Sbjct: 392 MDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTS 451
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L R+ A F + + G P+ +NA++ +C + ++ A+ ++ EM K
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN 511
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P+ TY+ ++ + G+ EEA + K M R+ G P +Y ++ + ++ A
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRR-GIRPDHISYNTLISGYSKRGDINDA 570
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I DEM + G P + Y+ LI LC + D A + +EM+ GI P + +L +
Sbjct: 571 FTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630
Query: 301 L 301
+
Sbjct: 631 I 631
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 154/324 (47%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ FN ++ K E ++ +M + + + ++ I++ ++
Sbjct: 192 MKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + M++ G +P+VV+Y +I+ +CS R + A + M+ +P + + +
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G+ +L EA + K+ G P A TYN ++ YC + A+ DEM +
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY++++H L G+ +EA + K M G P TY I++ +C A
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMG-DSGIVPDSITYNILINGYCRCGNAKKA 430
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ DEM ++G+ P + Y++LI L +++ A F++++ G P +F+ L
Sbjct: 431 FNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDG 490
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
G + A L +++DK P
Sbjct: 491 HCANGNLDRAFALLKEMDKRNIVP 514
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 154/310 (49%), Gaps = 1/310 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + +K + FN +I+ LCK +++A++ M+ P++ +Y ++ G+ +
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V MK+ G EPD +YG +I+ C + +EA + +M+ P+ + T
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ L +A + + +R P TYN ++ A ++++A M+ +M G
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P++ TY+I+++ + G ++A+++ M K G +PT+ TY ++ + ++ A
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISK-GIQPTLVTYTSLIYVLSKRNRMKAA 465
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++++ G P + M++ LI+ C LD A +EM I P ++ L Q
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525
Query: 301 LRDEGMEETA 310
EG E A
Sbjct: 526 RCREGKVEEA 535
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 140/336 (41%), Gaps = 36/336 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+K + +N +I C VE A+ V D MK R +PD +Y L+ G +
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGK 321
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + + +MK+ G P V+Y +I+ +C+ +A EM P+ +
Sbjct: 322 LEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNL 381
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L E ++ EA G P++ TYN ++ YC A+ + DEM G
Sbjct: 382 LIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG 441
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY +++ L K R + A +F+++ R+ G P + + ++ C N +D A
Sbjct: 442 IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE-GASPDLIMFNALIDGHCANGNLDRA 500
Query: 241 M-----------------------------------RIWDEMKARGVLPVMHMYSTLINS 265
+ EMK RG+ P Y+TLI+
Sbjct: 501 FALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISG 560
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++DA EML IG P ++ L Q L
Sbjct: 561 YSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGL 596
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 1/224 (0%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E + MK+ G P + ++ M++ + + L+ EM K + + F +IN L
Sbjct: 187 ECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVL 246
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
E +L +A F G + G +P TYN V+ YC R+ A ++D M+ G+ P++
Sbjct: 247 CKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDS 306
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY ++ + K G+ EEA + ++M ++ G PT TY ++ +C + A D
Sbjct: 307 YTYGSLISGMCKGGKLEEASGILEKM-KEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRD 365
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM R +LP + Y+ LI++L E K+D+A ++M D GI P
Sbjct: 366 EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVP 409
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L + LI L K ++ A ++F+K+ + PD+ + L++G NL
Sbjct: 441 GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRA 500
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +EM PD V+Y ++ C + +EA EL +EM+ +P + TLI+G
Sbjct: 501 FALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISG 560
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+++A + GF P TYNA++ C + + + A ++ EM GI P+
Sbjct: 561 YSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPD 620
Query: 185 TRTYDIVLHHLIKAGRTEEA 204
TY ++ + K + EA
Sbjct: 621 DSTYFSLIEGIGKVDDSSEA 640
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK + + +N L+ C+ VE A+E+ +MK+R PD SY L+ G+ ++ +
Sbjct: 507 MDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGD 566
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM GF P +++Y +I C ++ D A EL +EM + P + +
Sbjct: 567 INDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFS 626
Query: 121 LINGLGSEKRLSEA 134
LI G+G SEA
Sbjct: 627 LIEGIGKVDDSSEA 640
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
++ ++ A C R +DA+ D M++ G+ P T++ +L +K +TE + ++ M
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227
Query: 212 SR----------------------------------KPGTEPTVSTYEIVVRMFCYNAQV 237
R G +P V TY V+ +C +V
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ A + D MK RGV P + Y +LI+ +C KL++A ++M +IG+ P ++ L
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347
Query: 298 KQALRDEG 305
++G
Sbjct: 348 IDGYCNKG 355
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 144/306 (47%), Gaps = 4/306 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + F LI+ CK+ ++ A V M D+++Y +L+ ++ L
Sbjct: 383 GFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEA 442
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E EM +G P+VV Y +I+ +C A+E+F+ ME C P+ + +LI G
Sbjct: 443 KETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYG 502
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +K+L +A+ + ++ G P Y ++ C ++A+R+ + M K G+ P+
Sbjct: 503 LIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPD 562
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+ Y+++ L K+GR EEAYS R G T TY +V F D A +
Sbjct: 563 EQAYNVLTDALCKSGRAEEAYSFLVR----KGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 618
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
++M G ++ YS L+ +LC + KL++A +M G++ ++ + + E
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKE 678
Query: 305 GMEETA 310
G + A
Sbjct: 679 GKHDHA 684
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 151/319 (47%), Gaps = 20/319 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL + +N L D LCKS RA+E + + ++ +YT L++G+ + N
Sbjct: 554 MEKNGLTPDEQAYNVLTDALCKS---GRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGN 610
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +M ++G + D+ +Y +++ A C K+ +EA+ + +M + K + +
Sbjct: 611 TDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTI 670
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+ + E + A F + G +P A TY + +YC +I +A ++ EM + G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 730
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF----CYNA- 235
+ P+ TY I ++ G + A+S KRM EP TY ++++ F NA
Sbjct: 731 VTPDVVTYHIFINGCGHMGYMDRAFSTLKRMV-DASCEPNCWTYWLLLKHFLKMSLINAH 789
Query: 236 -----------QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+++ ++ + M G+ P + YS++I C +L++AC ML
Sbjct: 790 YIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLG 849
Query: 285 IGIRPPGQLFSNLKQALRD 303
I P ++++ L + D
Sbjct: 850 KAISPNEEIYTMLIKCCCD 868
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 152/318 (47%), Gaps = 4/318 (1%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K +L + LI+ L K ++ A+E ++M P++ YT +++G+ + + + E
Sbjct: 420 KLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALE 479
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V++ M+ +G P+ +YG +I K+ +A+ L +M+ P + TLI G
Sbjct: 480 VFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQC 539
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ A + F +K G P+ YN + A C S R +AY + +RK G+
Sbjct: 540 KKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--VRK-GVVLTKV 596
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ KAG T+ A + ++M + G + + TY ++++ C +++ A+ I D+
Sbjct: 597 TYTSLVDGFSKAGNTDFAAVLIEKMVNE-GCKADLYTYSVLLQALCKQKKLNEALSILDQ 655
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M GV + Y+ +I+ + E K D A F EM+ G +P ++ + G
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQ 715
Query: 307 EETAVVLAQKIDKLRKTP 324
E A L ++++ TP
Sbjct: 716 IEEAEHLIGEMERDGVTP 733
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 156/366 (42%), Gaps = 41/366 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ + LI L ++R V A + M + ++ YT+L++G ++
Sbjct: 240 MPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGR 299
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM G P V +Y MI+ +C + R +A+ + ME C P + +
Sbjct: 300 IHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNS 359
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM---- 176
LI GL K L EA + + RGF P T+ ++ YC + RI+DA R+ M
Sbjct: 360 LIYGLCGGK-LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSN 418
Query: 177 ----------------RKC---------------GIGPNTRTYDIVLHHLIKAGRTEEAY 205
+KC G+ PN Y ++ K G A
Sbjct: 419 CKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAAL 478
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
VFK M + G P TY ++ + ++ AM + +M+ G+ P + Y+TLI
Sbjct: 479 EVFKLMEHE-GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQG 537
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQK---IDKLR 321
C + + D+A + F+ M G+ P Q ++ L AL G EE L +K + K+
Sbjct: 538 QCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVT 597
Query: 322 KTPLVD 327
T LVD
Sbjct: 598 YTSLVD 603
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 2/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N +I CK + A F +++ D + LL G+ + +L
Sbjct: 174 GLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKA 233
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M G + SY I+I A+ EA+ L M C + H++ LI G
Sbjct: 234 CWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKG 293
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L E R+ +A + RG P TYNA++ YC S R+ DA + M + G P+
Sbjct: 294 LCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPD 353
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ L G+ +EA + + G PTV T+ ++ +C ++D A+R+
Sbjct: 354 DWTYNSLIYGLC-GGKLDEAEELLNGAIAR-GFTPTVITFTNLINGYCKAERIDDALRVK 411
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M + + Y LIN L + +L +A + EM G+ P +++++
Sbjct: 412 SNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKV 471
Query: 305 GMEETAV 311
GM A+
Sbjct: 472 GMVGAAL 478
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N + +L + E +++ + + PD +Y ++ + ++ +L + + ++
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G + D + ++ +C +A L M C+ + + + LI GL + +
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EAL + G Y ++ C RI+DA ++DEM G+ P+ TY+ ++
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K+GR ++A + K + + G P TY ++ C ++D A + + ARG
Sbjct: 327 DGYCKSGRMKDALGI-KALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGF 384
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLD----IGIRPPGQLFSNLKQALRDEGMEE 308
P + ++ LIN C +++DDA + M+ + ++ G L + L + R + +E
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444
Query: 309 T 309
T
Sbjct: 445 T 445
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + ++ +I CK+ +E A + D M + P+ + YT+L++ K
Sbjct: 812 MMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKL 871
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
+M + GF+P + SY +I C YD A LF ++
Sbjct: 872 FGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDL 917
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 147/308 (47%), Gaps = 2/308 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC E+A E+ M PDI +Y L++G+ + L NE++ ++K
Sbjct: 209 FNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVK 268
Query: 73 DD-GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G PDVV+Y MI+ +C A + EA L +M P+ F L++G +
Sbjct: 269 SSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEM 328
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A + G+ G P+ T+ +++ YC ++N +R+ +EM G+ PN TY I+
Sbjct: 329 HTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSIL 388
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ L K R +A + +++ K P Y V+ FC +V+ A+ I +EM+ +
Sbjct: 389 INALCKENRLLKARELLGQLASKD-IIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKK 447
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P ++ LI C + ++ +A F +M+ IG P S+L L GM + A
Sbjct: 448 CKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY 507
Query: 312 VLAQKIDK 319
L Q K
Sbjct: 508 HLNQIAHK 515
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 158/358 (44%), Gaps = 39/358 (10%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ---- 58
K ++ +N L +LCK+ + A ++F+ MK P+ + L+ + ++
Sbjct: 96 KLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLH 155
Query: 59 -----------------------KNLLSMNEVYREMKDDGFEP--------DVVSYGIMI 87
L+ ++ V MK FE D ++ I+I
Sbjct: 156 CATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKL--FEEHLRFQSCNDTKTFNILI 213
Query: 88 NAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR-GF 146
C + ++AVEL M C P + TLI G L +A + F K G
Sbjct: 214 RGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGC 273
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P+ TY +++ YC + ++ +A ++D+M + GI P T+++++ KAG A
Sbjct: 274 SPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEE 333
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ +M G P V T+ ++ +C QV+ R+W+EM ARG+ P YS LIN+L
Sbjct: 334 IRGKMI-SFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 267 CHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
C E++L A + ++ I P +++ + G A+V+ ++++K + P
Sbjct: 393 CKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKP 450
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 130/267 (48%), Gaps = 2/267 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRR-FDPDIKSYTILLEGWGQQK 59
M FG ++ +N LI CKS +++A E+FD +K PD+ +YT ++ G+ +
Sbjct: 232 MSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAG 291
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+ + + +M G P V++ ++++ + A A E+ +M + C P F
Sbjct: 292 KMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFT 351
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI+G ++++ + + + RG P A TY+ ++ A C R+ A ++ ++
Sbjct: 352 SLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASK 411
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I P Y+ V+ KAG+ EA + + M +K +P T+ I++ C ++
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKK-CKPDKITFTILIIGHCMKGRMFE 470
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSL 266
A+ I+ +M A G P S+L++ L
Sbjct: 471 AVSIFHKMVAIGCSPDKITVSSLLSCL 497
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 105/207 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ FN L+D K+ + A+E+ KM PD+ ++T L++G+ +
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ 362
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM G P+ +Y I+INA C R +A EL ++ + + P P ++
Sbjct: 363 VNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNP 422
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G +++EA+ + +K+ +P+ T+ ++ +C R+ +A + +M G
Sbjct: 423 VIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSV 207
P+ T +L L+KAG +EAY +
Sbjct: 483 CSPDKITVSSLLSCLLKAGMAKEAYHL 509
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 158/320 (49%), Gaps = 2/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N LI LCK ++ A+E+ ++M+ + +P++ +YTIL++ + ++
Sbjct: 398 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 457
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V EM G + V Y +I+A C ++ +A+ +F +M + CKP F +
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL + EAL + G TYN ++ A+ + +A +++++M G
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY+ ++ L +AG E+ ++F+ M K G P + I++ C + A
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK-GLNPNNISCNILINGLCRTGNIQHA 636
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M RG+ P + Y++LIN LC + +A F ++ GI P ++ L
Sbjct: 637 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 696
Query: 301 LRDEGMEETA-VVLAQKIDK 319
EGM + A ++L++ +D
Sbjct: 697 HCKEGMFDDAHLLLSRGVDS 716
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 151/306 (49%), Gaps = 2/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVF-DKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN LI+ ++ A+ V + M PDI +Y L+ G ++ L+S E+ EM
Sbjct: 374 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G EP+V++Y I+I+ C R +EA + EM + + LI+ L ++++
Sbjct: 434 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+AL FG +G +P+ T+N+++ C + +A + +M G+ NT TY+ +
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H ++ G +EA + M + G TY +++ C ++ + ++++M ++G
Sbjct: 554 IHAFLRRGAMQEALKLVNDMLFR-GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ P + LIN LC + A ++ ++M+ G+ P +++L L G + A+
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672
Query: 312 VLAQKI 317
L K+
Sbjct: 673 NLFDKL 678
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 148/310 (47%), Gaps = 13/310 (4%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD FN I LCK + A ++ D+M R F P+ +Y +L+ G L M +
Sbjct: 302 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG------LCRMGK 355
Query: 67 V--YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE-MEATNCKPSPHIFCTLIN 123
V R + + P+VV + +IN + S R DEA + E M + C P + TLI
Sbjct: 356 VDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 415
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL + L A + + + +G EP TY ++ +C R+ +A ++DEM G+
Sbjct: 416 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 475
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N Y+ ++ L K + ++A ++F MS K G +P + T+ ++ C + + A+ +
Sbjct: 476 NAVGYNCLISALCKDEKVQDALNMFGDMSSK-GCKPDIFTFNSLIFGLCKVNKFEEALGL 534
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ +M GV+ Y+TLI++ + +A K +ML G ++ L +AL
Sbjct: 535 YQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 594
Query: 304 EGMEETAVVL 313
G E + L
Sbjct: 595 AGNIEKGLAL 604
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 32/300 (10%)
Query: 42 DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
+P +SY ++L+ + V+ EM G P V ++G+++ A C D A
Sbjct: 197 EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 256
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L ++M C P+ ++ TLI+ L R++E L+ + G P+ T+N + C
Sbjct: 257 LLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 316
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL-------------------------- 195
+RI++A +++D M G PN+ TY +++H L
Sbjct: 317 KMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNT 376
Query: 196 -----IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+ GR +EA +V G P + TY ++ C + A + +EM+ +
Sbjct: 377 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 436
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEET 309
G P + Y+ LI+ C E +L++A EM G+ ++ L AL +DE +++
Sbjct: 437 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 496
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 145/336 (43%), Gaps = 33/336 (9%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N ++D L + VF +M + P + ++ ++++ + S + ++M
Sbjct: 202 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 261
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G P+ + Y +I+A R +E ++L EM C P + F I+GL R+
Sbjct: 262 TRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 321
Query: 132 SEALQFFGQSKKRGFEPEAPTY-------------------------------NAVVGAY 160
EA + + RGF P + TY N ++ Y
Sbjct: 322 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGY 381
Query: 161 CWSMRINDAYRMMDE-MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
R+++A +M E M G GP+ TY+ ++ L K G A + M K G EP
Sbjct: 382 VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK-GCEP 440
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY I++ FC +++ A + DEM +G+ Y+ LI++LC ++K+ DA F
Sbjct: 441 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 500
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+M G +P F++L L E A+ L Q
Sbjct: 501 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 536
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K ++ FN LI LCK E A ++ M + +Y L+ + ++
Sbjct: 503 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M G D ++Y +I A C A ++ + LF +M + P+ +I C
Sbjct: 563 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN-NISCN 621
Query: 121 -LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGL + AL+F RG P+ TYN+++ C + R +A + D+++
Sbjct: 622 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 681
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
GI P+ TY+ ++ K G ++A+ + R G P T+ I+V F
Sbjct: 682 GICPDAITYNTLISWHCKEGMFDDAHLLLSR-GVDSGFIPNEVTWYILVSNF 732
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +N LI + ++ A ++ + M R D +Y L++ + N+
Sbjct: 542 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 601
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M G P+ +S I+IN C A+E R+M P + +LING
Sbjct: 602 LALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLING 661
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R EAL F + + G P+A TYN ++ +C +DA+ ++ G PN
Sbjct: 662 LCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 721
Query: 185 TRTYDIVLHHLIKAGRTE 202
T+ I++ + IK G E
Sbjct: 722 EVTWYILVSNFIKEGDQE 739
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+ DA M +M++ GI + +++ H +AG +A + M EPT +Y
Sbjct: 146 KTTDALLM--QMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSY 203
Query: 225 EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+V+ + + ++ EM ++G+ P ++ + ++ +LC +++D AC ++M
Sbjct: 204 NVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTR 263
Query: 285 IGIRPPGQLFSNLKQALRDEG 305
G P ++ L AL G
Sbjct: 264 HGCVPNAIVYQTLIHALSKVG 284
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 150/302 (49%), Gaps = 12/302 (3%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD +N +IDTLCK+R + RA E F+ M +PD+ +Y LL G + +
Sbjct: 67 VPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACS 122
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M+ G P V+Y +I+ C +++ A L + M + C P+ + +C++INGL
Sbjct: 123 LFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLC 182
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+++ +A Q F + K G +P+ TYN ++ C R+++A ++ M + G P+
Sbjct: 183 KNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKI 242
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T+ ++ L R +EA+ +F+ M+ K G P + T+ ++V C ++ A+ +
Sbjct: 243 TFTALIEGLCTTDRIKEAFVLFQGMA-KQGCAPDLVTHTVLVSKLCILRKLRPALSVVRN 301
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD--E 304
A + +Y+ + L D A + Q+M G+ P ++ + L D E
Sbjct: 302 YPA--CPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKE 359
Query: 305 GM 306
GM
Sbjct: 360 GM 361
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 142/343 (41%), Gaps = 34/343 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G+ + LID CK E A + M R+ P + SY ++ G + +
Sbjct: 127 MEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRK 186
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EMK G +PD V+Y +I+ C +R EA +L M +P F
Sbjct: 187 VDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTA 246
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI-------------- 166
LI GL + R+ EA F K+G P+ T+ +V C ++
Sbjct: 247 LIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACP 306
Query: 167 -------------------NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV 207
+ A R++ +M + G+ PN TY L AY
Sbjct: 307 EAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYRE 366
Query: 208 FKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLC 267
F+RM + G EP + Y ++V FC ++DMA ++ M G+ P + Y+TL+ C
Sbjct: 367 FRRMLEQ-GIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHC 425
Query: 268 HEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ K++ + M+ G +P +S L L G + A
Sbjct: 426 RKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAA 468
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 128/280 (45%), Gaps = 13/280 (4%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+D L ++R E+ VF ++ + P+ SY L++ + + EM
Sbjct: 4 NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI--FCTLINGLGSEKRL 131
+ PDV +Y ++I+ C A+R A+E F M P P + + TL+ GL R+
Sbjct: 64 EKLVPDVFTYNVVIDTLCKARRISRAIEFFETM------PEPDVVTYNTLLGGLCKNGRV 117
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKCGIGPNTRTYD 189
++A FG + G P TY ++ +C + AY ++ M RKC P +Y
Sbjct: 118 AQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKC--SPTVYSYC 175
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
+++ L K + ++AY +F+ M + G +P TY ++ C ++ A + M
Sbjct: 176 SIINGLCKNRKVDQAYQLFEEM-KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVE 234
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
G P ++ LI LC D++ +A FQ M G P
Sbjct: 235 NGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAP 274
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 5/258 (1%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V+R + +P+ +SY ++ A C + D+A EM P + +I+ L
Sbjct: 22 VFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLC 81
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+R+S A++FF EP+ TYN ++G C + R+ A + M GI P+
Sbjct: 82 KARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV 137
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY ++ K + E AY + + M+ + PTV +Y ++ C N +VD A ++++E
Sbjct: 138 TYTTLIDVFCKMCQFETAYGLLQLMASRK-CSPTVYSYCSIINGLCKNRKVDQAYQLFEE 196
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
MK G P Y+TLI+ LC + +L +A M++ G +P F+ L + L
Sbjct: 197 MKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDR 256
Query: 307 EETAVVLAQKIDKLRKTP 324
+ A VL Q + K P
Sbjct: 257 IKEAFVLFQGMAKQGCAP 274
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 5/209 (2%)
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
A+R ++ V +FR + + +CKP+ +C L+ L ++ +A + + P+ T
Sbjct: 13 ARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFT 72
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS 212
YN V+ C + RI+ A + M + P+ TY+ +L L K GR +A S+F M
Sbjct: 73 YNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSME 128
Query: 213 RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKL 272
G P+ TY ++ +FC Q + A + M +R P ++ Y ++IN LC K+
Sbjct: 129 -GAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKV 187
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
D A + F+EM G +P ++ L L
Sbjct: 188 DQAYQLFEEMKLAGCKPDRVTYNTLIHGL 216
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 40/311 (12%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+ +I+ LCK+R V++A ++F++MK PD +Y L+ G ++ L ++ M
Sbjct: 173 SYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVM 232
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
++GF+PD +++ +I C+ R EA LF+ M C P L++ L ++L
Sbjct: 233 VENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKL 292
Query: 132 SEALQ------------------FFGQSKKRGFE---------------PEAPTYNAV-- 156
AL F ++RGF+ P TY A
Sbjct: 293 RPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFK 352
Query: 157 -VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
+G + MR AYR M + GI P+ Y++++ KA R + A + + M +
Sbjct: 353 GLGDWKEGMR---AYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQS- 408
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P + TY +V C +V+ + M +RG P + +STL+ L + D A
Sbjct: 409 GLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAA 468
Query: 276 CKYFQEMLDIG 286
+ + G
Sbjct: 469 YSFLNLAMSQG 479
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN +Y ++ L + G+ ++A S M+R+ P V TY +V+ C ++ A+
Sbjct: 33 PNALSYCYLVKALCRTGKIDKACSTIAEMAREK-LVPDVFTYNVVIDTLCKARRISRAIE 91
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
++ M P + Y+TL+ LC ++ AC F M GI P ++ L
Sbjct: 92 FFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFC 147
Query: 303 DEGMEETAVVLAQKIDKLRKTPLV 326
ETA L Q + + +P V
Sbjct: 148 KMCQFETAYGLLQLMASRKCSPTV 171
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 141/301 (46%), Gaps = 5/301 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ +FG + +N ++DTL ++ V+ MK+ F+P++ +Y +LL+ +
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM + G PD VSY +I++ C E EL E P ++
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNA 251
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL E A + + ++G P +Y+ ++ C S +I A+ + +M K G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
PN T ++ G T +A ++ +M R G +P V Y +V+ FC + + A
Sbjct: 312 CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKA 371
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ ++ M+ G P + Y +LIN LD A + +ML G P +++N+ +A
Sbjct: 372 VSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEA 431
Query: 301 L 301
L
Sbjct: 432 L 432
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 141/292 (48%), Gaps = 7/292 (2%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
ERA E+F ++K+ DP +K Y +L+ + + + VYR+MK DGFEP+V +Y ++
Sbjct: 128 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 187
Query: 87 INAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGF 146
+ A C + D A +L EM C P + T+I+ + + E G+ F
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE-----GRELAERF 242
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
EP YNA++ C A+ +M EM + GI PN +Y +++ L +G+ E A+S
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-KARGVLPVMHMYSTLINS 265
+M ++ G P + T +V+ A+ +W++M + G+ P + Y+TL+
Sbjct: 303 FLTQMLKR-GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
C + A F M +IG P + + +L G + AV + K+
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKM 413
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 7/325 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +N L+ LCK+ V+ A+++ +M + PD SYT ++ +
Sbjct: 172 MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCE--- 228
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + RE+ + FEP V Y +IN C Y A EL REM P+ + T
Sbjct: 229 -VGLVKEGRELAER-FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYST 286
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKC 179
LIN L + ++ A F Q KRG P T +++V DA + ++M R
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ PN Y+ ++ G +A SVF M + G P + TY ++ F +D
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM-EEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A+ IW++M G P + +Y+ ++ +LC K +A + M P F+ +
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
L D G + A + +++++ + P
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCP 490
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 4/297 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FGL+ + +N L+ C ++ +A VF M++ P+I++Y L+ G+ ++ +L
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ +M G P+VV Y M+ A C ++ EA L M NC PS F I
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 124 GLGSEKRLSEALQFFGQSKKRG-FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GL RL A + F Q +++ P TYN ++ + RI +AY + E+ G+
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
++ TY+ +LH AG A + +M G P T +++ +C + + A +
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVD-GKSPDEITMNMIILAYCKQGKAERAAQ 584
Query: 243 IWDEMKA--RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ D + R P + Y+ +I LC + +D + M+ GI P +S L
Sbjct: 585 MLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVL 641
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 143/315 (45%), Gaps = 4/315 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ + ++ LI+ LC S +E A +M KR P+I + + L++G +
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 65 NEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+++ +M + G +P+VV+Y ++ CS +AV +F ME C P+ + +LIN
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G L A+ + + G P Y +V A C + +A +++ M K P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ T++ + L AGR + A VF++M ++ P + TY ++ +++ A +
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
E+ RGV Y+TL++ C+ A + +M+ G P + + A
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 304 EGMEETAVVLAQKID 318
+G E A AQ +D
Sbjct: 576 QGKAERA---AQMLD 587
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 118/251 (47%), Gaps = 6/251 (2%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
++ +++ + S+ + ++MK GF + +I+ + + AVE+F +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
+ C PS I+ +++ L E R+ + K+ GFEP TYN ++ A C + ++
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+ A +++ EM G P+ +Y V+ + + G +E + +R EP VS Y
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF------EPVVSVYNA 251
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ C A + EM +G+ P + YSTLIN LC+ +++ A + +ML G
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG 311
Query: 287 IRPPGQLFSNL 297
P S+L
Sbjct: 312 CHPNIYTLSSL 322
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 6/235 (2%)
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
F+ +++ +MI + D L ++M+ S +F ++I+ A+
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + K+ G +P YN V+ RI Y + +M++ G PN TY+++L L
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
K + + A + MS K G P +Y V+ C V + + + PV
Sbjct: 192 CKNNKVDGAKKLLVEMSNK-GCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PV 245
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ +Y+ LIN LC E A + +EM++ GI P +S L L + G E A
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 156/317 (49%), Gaps = 4/317 (1%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMN 65
+L FN +I LCK+ + +A +V ++ P + +Y +++G+ G+ + ++
Sbjct: 184 DLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVD 243
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+ +EM + G P+ V++ +++N +C AV +F EM+ S + L+ GL
Sbjct: 244 ALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGL 303
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
SE ++ E ++ + K G P T N+V+ +C + DA +D M + + PN
Sbjct: 304 CSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNV 363
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY I++ + + ++A +V + MS K G P Y ++ F N + D
Sbjct: 364 VTYTILVDGYRRLDKMKDALAVKEAMSGK-GVRPNARIYNCLIAGFTRNGDWRSVSGLLD 422
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
EM+ +GV + Y+ LI +LC + ++ A K EML +G+ P ++ + ++G
Sbjct: 423 EMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKG 482
Query: 306 MEETAVVLAQKIDKLRK 322
++A + +++K +K
Sbjct: 483 NIKSAYEIRTRMEKGKK 499
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 145/340 (42%), Gaps = 39/340 (11%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEV---FDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+GL + +N +ID CK R V +M + P+ ++ +L+ G+ + N
Sbjct: 214 WGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSN 273
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V+ EMK G VV+Y ++ CS + +E V+L EM+ P+ +
Sbjct: 274 TAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNS 333
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NG + +++A + +++ +P TY +V Y ++ DA + + M G
Sbjct: 334 VLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKG 393
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN R Y+ ++ + G + M R G + TY +++ C +V A
Sbjct: 394 VRPNARIYNCLIAGFTRNGDWRSVSGLLDEM-RMKGVRADIVTYNVLIGALCVKGEVRKA 452
Query: 241 MRIWDEMKARGVLPVMHMYSTLINS----------------------------------- 265
+++ DEM G+ PV Y+T+IN
Sbjct: 453 VKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKC 512
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
LC K+++ + EML+ G+ P G + +K+ + ++G
Sbjct: 513 LCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 119/262 (45%), Gaps = 1/262 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ + ++ L+ LC VE ++ D+MK P++ + +L G+ ++
Sbjct: 284 MKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGM 343
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ M+ +P+VV+Y I+++ + + +A+ + M +P+ I+
Sbjct: 344 MTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNC 403
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G + + +G + TYN ++GA C + A +++DEM G
Sbjct: 404 LIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVG 463
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ +++ + G + AY + RM K V TY + ++ C +++
Sbjct: 464 LEPVHLTYNTIINGYCEKGNIKSAYEIRTRM-EKGKKRANVVTYNVFIKCLCRMGKMEET 522
Query: 241 MRIWDEMKARGVLPVMHMYSTL 262
+ +EM +G++P Y T+
Sbjct: 523 NELLNEMLEKGLVPNGVTYDTI 544
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
P S +++A +A+R D A F+ P F +I+GL +L +A
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDV 207
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR---MMDEMRKCGIGPNTRTYDIVLHH 194
+ G P TYN ++ YC R Y ++ EM + GI PN T++++++
Sbjct: 208 AKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
K T A VF+ M ++ G +V TY +V C +V+ +++ DEMK G++P
Sbjct: 268 YCKDSNTAAAVRVFEEM-KQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ ++++N C + + DA + M ++P
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKP 361
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
Query: 112 KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYR 171
+PS L++ L + +R+ A + F + +R P+ T+N V+ C + ++ A
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSV---FKRMSRKPGTEPTVSTYEIVV 228
+ ++R G+ P+ TY+ ++ K GR Y V K M + G P T+ ++V
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV-EAGISPNEVTFNVLV 265
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+C ++ A+R+++EMK +G+ + YS L+ LC E K+++ K EM D+G+
Sbjct: 266 NGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLV 325
Query: 289 PPGQLFSNLKQALRDEGM 306
P +++ +GM
Sbjct: 326 PNLATLNSVLNGFCKKGM 343
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 40/241 (16%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQ 57
M GL L N +++ CK + A+ D M+++ P++ +YTIL++G+ +
Sbjct: 319 MKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDK 378
Query: 58 QKNLLSMNE------------VYR--------------------EMKDDGFEPDVVSYGI 85
K+ L++ E +Y EM+ G D+V+Y +
Sbjct: 379 MKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNV 438
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I A C +AV+L EM +P + T+ING + + A + + +K
Sbjct: 439 LIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGK 498
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
TYN + C ++ + +++EM + G+ PN TYD IK G E+ Y
Sbjct: 499 KRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDT-----IKEGMMEKGY 553
Query: 206 S 206
+
Sbjct: 554 T 554
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 11/239 (4%)
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR---LSEALQFFGQSKKRGFEP 148
+A R + R + A++ SP I L+ L S + EA G + R P
Sbjct: 93 AAARLHSPASIVRALPASS---SPLIADLLVLALASASQPLASYEAFLLAGDAHPR-HRP 148
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
A + N ++ A + R++ A R + + P+ T++IV+ L K G+ +A V
Sbjct: 149 SAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVA 208
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI---WDEMKARGVLPVMHMYSTLINS 265
K + R G P+V TY ++ +C + + EM G+ P ++ L+N
Sbjct: 209 KDI-RAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNG 267
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
C + A + F+EM GI +S L L EG E V L ++ L P
Sbjct: 268 YCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 149/292 (51%), Gaps = 6/292 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID LC+S ++E AQ + ++M + PD+ +YT L++G+ + NL EVY EM
Sbjct: 449 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 508
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK-PSPHIFCTLINGLGSEKRL 131
G +PD +Y D+A L EM AT+ P I+ I+GL L
Sbjct: 509 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 568
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A++F + + G P+ TY V+ Y + + A + DEM + + P+ TY ++
Sbjct: 569 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 628
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ KAGR E+A+ M +K G P V T+ ++ C +D A R +M+ G
Sbjct: 629 IYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 687
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG----QLFSNLKQ 299
+ P + Y+ LI+ C +K ++ K ++EMLD I P G LF +L++
Sbjct: 688 IPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 739
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 32/295 (10%)
Query: 33 FDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCS 92
F+KM ++ F P +++ I+L+ + + + VY M + G P V+++ M+++
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
A + +++ EM+ N + S + LING ++ EA +F G ++ GF +
Sbjct: 288 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 347
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI---------------------- 190
+N ++ YC +DA+ + DEM GI P T TY+I
Sbjct: 348 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 407
Query: 191 ---------VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
++H IK G+ EA +F + R P++ TY ++ C + ++ A
Sbjct: 408 APDVVSYNTLMHGYIKMGKFVEASLLFDDL-RAGDIHPSIVTYNTLIDGLCESGNLEGAQ 466
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
R+ +EM + + P + Y+TL+ L A + + EML GI+P G ++
Sbjct: 467 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 521
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 134/315 (42%), Gaps = 6/315 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ K+ +E A+ M++ F S+ L+EG+ +Q V EM
Sbjct: 313 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 372
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P +Y I I A C R D+A EL M A P + TL++G +
Sbjct: 373 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFV 428
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + P TYN ++ C S + A R+ +EM I P+ TY ++
Sbjct: 429 EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 488
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+K G A V+ M RK G +P Y D A R+ +EM A
Sbjct: 489 KGFVKNGNLSMATEVYDEMLRK-GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 547
Query: 253 -LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + +Y+ I+ LC L A ++ +++ +G+ P ++ + + + G + A
Sbjct: 548 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 607
Query: 312 VLAQKIDKLRKTPLV 326
L ++ + R P V
Sbjct: 608 NLYDEMLRKRLYPSV 622
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L +N ID LCK ++ +A E K+ + PD +YT ++ G+ + +Y
Sbjct: 551 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 610
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
EM P V++Y ++I H A R ++A + EM+ +P+ L+ G+
Sbjct: 611 DEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKA 670
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ EA ++ + ++ G P +Y ++ C + + ++ EM I P+ T+
Sbjct: 671 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 730
Query: 189 DIVLHHLIK 197
+ HL K
Sbjct: 731 RALFKHLEK 739
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
F + ++GF P N V+ S +N A + + M + GI P T++ +L K
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
AG E ++ M R+ E + TY I++ F N +++ A R +M+ G +
Sbjct: 288 AGDLERVDKIWLEMKRR-NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 346
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
++ LI C + DDA EML+ GI P ++ AL D G
Sbjct: 347 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 394
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 73/154 (47%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+ GL + + +I ++ + A+ ++D+M ++R P + +Y +L+ G + L
Sbjct: 580 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 639
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ EMK G P+V+++ ++ C A DEA +ME P+ + + LI
Sbjct: 640 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 699
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+ ++ E ++ + + + EP+ T+ A+
Sbjct: 700 SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 733
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 147/323 (45%), Gaps = 45/323 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ +L ++ L+ L S + A +F M PDI +Y +L++G+ +
Sbjct: 118 MKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQ 174
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +E+ G+EP+V +Y I+IN +C + +EA E+F +M +NC P+ F T
Sbjct: 175 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 234
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC------------------- 161
LI G L +A++ F + +K G + TYN ++ + C
Sbjct: 235 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 294
Query: 162 ---------------WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
+S R ND R++ M G P+ TY+ ++ L A R E+A
Sbjct: 295 GLTPTIVTYNSLIQGFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQR 354
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+F M+ P V+T+ ++R C +V+ A I D M A P M ++T+I +
Sbjct: 355 LFNGMA----CAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAF 406
Query: 267 CHEDKLDDACKYFQEMLDIGIRP 289
C + DA + ++ML G P
Sbjct: 407 CKAGAMHDAREVMKDMLKHGFYP 429
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 149/306 (48%), Gaps = 8/306 (2%)
Query: 22 KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVV 81
+R ++A +F ++ F P+ +Y +L+ G+ + + V+ +MK G P+
Sbjct: 2 SARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAS 61
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
+ ++ C + A++LFREM+A P+ L+ G R A++FF +
Sbjct: 62 TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEM 118
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
K G EP+ +Y+ ++ A S R+ +A+ + M P+ TY++++ K G+T
Sbjct: 119 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQT 175
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
EA S+ K + K G EP V TY I++ +C +V+ A ++ +M +P ++T
Sbjct: 176 YEAQSLMKEI-LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 234
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKIDKL 320
LI C L+DA K F EM IG + ++ L +L + G TAV L K++
Sbjct: 235 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 294
Query: 321 RKTPLV 326
TP +
Sbjct: 295 GLTPTI 300
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 137/290 (47%), Gaps = 10/290 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL N L+ LC+ + A ++F +M+ F P S+ ILL G+
Sbjct: 51 MKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR 110
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E ++EMK G EPD+ SY I+++A + R EA LF M C P +
Sbjct: 111 AI---EFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNV 164
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G + EA + K G+EP TY+ ++ YC ++ +A+ + +M +
Sbjct: 165 LMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN 224
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN-AQVDM 239
PN T++ ++ KAG E+A +F M K G + T+ TY ++ C V
Sbjct: 225 CVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM-EKIGCKATIVTYNTLIDSLCKKRGGVYT 283
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A+ ++++++ G+ P + Y++LI ++ +D + M G +P
Sbjct: 284 AVDLFNKLEGAGLTPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKP 331
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 10/196 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRH-VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M+K G K + +N LID+LCK R V A ++F+K++ P I +Y L++G+ ++
Sbjct: 255 MEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERA 314
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
N + M +G +PDV++Y +I+ CSA R ++A LF M C P+ F
Sbjct: 315 N--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMA---CAPNVTTFN 369
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI GL ++K++ EA R P+ T+N ++ A+C + ++DA +M +M K
Sbjct: 370 FLIRGLCAQKKVEEARNIL----DRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKH 425
Query: 180 GIGPNTRTYDIVLHHL 195
G PNT T + H +
Sbjct: 426 GFYPNTYTTYALAHGI 441
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 10/216 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN-LLSMNEVYREM 71
FN LI CK+ +E A ++F +M+K I +Y L++ +++ + + +++ ++
Sbjct: 232 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 291
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G P +V+Y +I ++R ++ + L M A CKP + LI+GL S R+
Sbjct: 292 EGAGLTPTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRV 349
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A + F P T+N ++ C ++ +A ++D M P+ T++ +
Sbjct: 350 EDAQRLF---NGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMT----APDMTTFNTI 402
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
+ KAG +A V K M + T +TY +
Sbjct: 403 ILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALA 438
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ +N LI LC + VE AQ +F+ M P++ ++ L+ G QK +
Sbjct: 328 GCKPDVITYNCLISGLCSANRVEDAQRLFNGMACA---PNVTTFNFLIRGLCAQKKV--- 381
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
E R + D PD+ ++ +I A C A +A E+ ++M P+ + L +G
Sbjct: 382 -EEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHG 440
Query: 125 LGSEK 129
+ S K
Sbjct: 441 IQSSK 445
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 4/287 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K +PD + LI+ LC VERA E+F++ + + PD+ Y L++G +Q +L
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLIL 306
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+V EM +DG PD+ +Y I+IN C +A + + P F T+I
Sbjct: 307 HALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMI 366
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G +L ALQ + G P+A TYN+V+ C + + + +EM G
Sbjct: 367 DGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 426
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY+I++ + K + EEA V RMS+ G P ++ ++ FC N +D A
Sbjct: 427 PNAITYNILIENFCKINQLEEASGVIVRMSQD-GLVPDTISFNTLIHGFCRNGDLDGAYL 485
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ ++ +G ++ LI + + + A K F EM+ G +P
Sbjct: 486 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 142/294 (48%), Gaps = 4/294 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD +N +ID CK ++ A E+ + F PD +Y L+ G + ++ E
Sbjct: 216 IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALE 275
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ E + +PD+V Y ++ C A+++ EM C P + +INGL
Sbjct: 276 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLC 335
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+S+A + +G+ P+ T+N ++ YC ++++ A ++++ M GI P+
Sbjct: 336 KMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAI 395
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY+ VL+ L KAG+ +E F+ M K G P TY I++ FC Q++ A +
Sbjct: 396 TYNSVLNGLCKAGKAKEVNETFEEMILK-GCRPNAITYNILIENFCKINQLEEASGVIVR 454
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M G++P ++TLI+ C LD A FQ++ + G F+ L A
Sbjct: 455 MSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 508
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 154/321 (47%), Gaps = 1/321 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
LK +L +N L+ LC+ + A +V ++M + PDI +Y I++ G + N+
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
V + G+ PDV ++ MI+ +C + D A++L M P + +++NGL
Sbjct: 345 VVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGL 404
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
+ E + F + +G P A TYN ++ +C ++ +A ++ M + G+ P+T
Sbjct: 405 CKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDT 464
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
+++ ++H + G + AY +F+++ K G T T+ I++ + + MA +I+
Sbjct: 465 ISFNTLIHGFCRNGDLDGAYLLFQKLDEK-GYSATADTFNILIGAYSSKLNMQMAEKIFG 523
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
EM ++G P ++ Y L++ C +D A + EM+ G P F + +L
Sbjct: 524 EMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNH 583
Query: 306 MEETAVVLAQKIDKLRKTPLV 326
AV + + ++ P V
Sbjct: 584 RVSEAVAIIHIMVRMGVVPEV 604
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 135/285 (47%), Gaps = 1/285 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G ++ +N +I+ LCK ++ A V + + + PD+ ++ +++G+ ++ L S
Sbjct: 319 GCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSA 378
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ M G PD ++Y ++N C A + E E F EM C+P+ + LI
Sbjct: 379 LQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIEN 438
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+L EA + + G P+ ++N ++ +C + ++ AY + ++ + G
Sbjct: 439 FCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSAT 498
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++I++ + A +F M K G +P + TY ++V C A VD A
Sbjct: 499 ADTFNILIGAYSSKLNMQMAEKIFGEMISK-GYKPDLYTYRVLVDGSCKAANVDRAYVHL 557
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
EM ++G +P M + ++NSL ++ +A M+ +G+ P
Sbjct: 558 AEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 149/343 (43%), Gaps = 38/343 (11%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ FN ++ LC+ + + + K+ KR + + I + G + L +
Sbjct: 114 DVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALV 173
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH------------ 116
M D PDVV+Y ++ C + EA + R M C P
Sbjct: 174 ESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKR 232
Query: 117 -----------------------IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTY 153
+C+LINGL +E + AL+ F +++ + +P+ Y
Sbjct: 233 DMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVY 292
Query: 154 NAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR 213
N++V C I A ++M+EM + G P+ TY+IV++ L K G +A V
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIV 352
Query: 214 KPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
K G P V T+ ++ +C ++D A+++ + M G+ P Y++++N LC K
Sbjct: 353 K-GYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQ 315
+ + F+EM+ G RP ++ L + + +EE + V+ +
Sbjct: 412 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 454
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 134/313 (42%), Gaps = 37/313 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD FG P +N ++D L + + ++A +V+ +M PD +++T
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHT----------- 49
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ I + C R A+ L R + C P +CT
Sbjct: 50 ------------------------VRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCT 85
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL + +A F + +R P+ T+N V+ A C I ++ ++ ++ K G
Sbjct: 86 VVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRG 145
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N T +I + L + GR EEA ++ + M P V TY ++R C +++V A
Sbjct: 146 MSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY--IAPDVVTYNTLMRGLCKDSKVQEA 203
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ M +G +P Y+T+I+ C D L +A + ++ + G P + +L
Sbjct: 204 AQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLING 263
Query: 301 LRDEGMEETAVVL 313
L EG E A+ L
Sbjct: 264 LCAEGDVERALEL 276
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
+G+ + +N +++ LCK+ + E F++M + P+ +Y IL+E + + L
Sbjct: 388 YGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 447
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
+ V M DG PD +S+ +I+ C D A LF++++ + F LI
Sbjct: 448 ASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG 507
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
S+ + A + FG+ +G++P+ TY +V C + ++ AY + EM G P
Sbjct: 508 AYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVP 567
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ T+ VL+ L R EA ++ M R G P V
Sbjct: 568 SMATFGRVLNSLAMNHRVSEAVAIIHIMVRM-GVVPEV 604
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + FN LI C++ ++ A +F K+ ++ + ++ IL+ + + N
Sbjct: 455 MSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLN 514
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ EM G++PD+ +Y ++++ C A D A EM + PS F
Sbjct: 515 MQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGR 574
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
++N L R+SEA+ + G PE
Sbjct: 575 VLNSLAMNHRVSEAVAIIHIMVRMGVVPEV 604
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P AP YNA++ A + + A+++ M G+ P+ RT+ + + GR A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
+ + + + G + Y VVR + A ++DEM R V P + ++ +++
Sbjct: 65 LRLLRSLPER-GCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+LC + + ++ ++L G+ + + L + G E AV L + +D
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD 177
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 158/320 (49%), Gaps = 2/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N LI LCK ++ A+E+ ++M+ + +P++ +YTIL++ + ++
Sbjct: 5 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V EM G + V Y +I+A C ++ +A+ +F +M + CKP F +
Sbjct: 65 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL + EAL + G TYN ++ A+ + +A +++++M G
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY+ ++ L +AG E+ ++F+ M K G P + I++ C + A
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK-GLNPNNISCNILINGLCRTGNIQHA 243
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M RG+ P + Y++LIN LC + +A F ++ GI P ++ L
Sbjct: 244 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 303
Query: 301 LRDEGMEETA-VVLAQKIDK 319
EGM + A ++L++ +D
Sbjct: 304 HCKEGMFDDAHLLLSRGVDS 323
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 1/223 (0%)
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ M G PD+ +Y +I C A EL EM+ C+P+ + LI+
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
E RL EA + +G A YN ++ A C ++ DA M +M G P+
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
T++ ++ L K + EEA +++ M + G TY ++ F + A+++ ++
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLE-GVIANTITYNTLIHAFLRRGAMQEALKLVND 179
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
M RG Y+ LI +LC ++ F++M+ G+ P
Sbjct: 180 MLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNP 222
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K ++ FN LI LCK E A ++ M + +Y L+ + ++
Sbjct: 110 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 169
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M G D ++Y +I A C A ++ + LF +M + P+ +I C
Sbjct: 170 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN-NISCN 228
Query: 121 -LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGL + AL+F RG P+ TYN+++ C + R +A + D+++
Sbjct: 229 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 288
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
GI P+ TY+ ++ K G ++A+ + R G P T+ I+V F
Sbjct: 289 GICPDAITYNTLISWHCKEGMFDDAHLLLSR-GVDSGFIPNEVTWYILVSNF 339
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +N LI + ++ A ++ + M R D +Y L++ + N+
Sbjct: 149 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 208
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M G P+ +S I+IN C A+E R+M P + +LING
Sbjct: 209 LALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLING 268
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R EAL F + + G P+A TYN ++ +C +DA+ ++ G PN
Sbjct: 269 LCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 328
Query: 185 TRTYDIVLHHLIKAGRTE 202
T+ I++ + IK G E
Sbjct: 329 EVTWYILVSNFIKEGDQE 346
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 146/286 (51%), Gaps = 13/286 (4%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL-SMNEVYREMKDD 74
LI C++ ++ + K+ F D ++T LL+G K +M+ V R M +
Sbjct: 98 LIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 157
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH---IFCTLINGL---GSE 128
G PDV SY ++ C R EA+EL M SP + T++NG G +
Sbjct: 158 GCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQ 217
Query: 129 KRLS-----EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+L+ +A++ K G P+ TYN+++ YC S + +A + +MR G+ P
Sbjct: 218 TKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 277
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY ++++L K GR+ EA +F M+++ G EP ++TY +++ C +V + ++
Sbjct: 278 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKR-GLEPDIATYRTLLQGHCKEGRVIESEKL 336
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+D M GV P + Y+TLI+ C K+D+A K M+ +G++P
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 382
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 146/301 (48%), Gaps = 1/301 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ L++ LCK+ A+++FD M KR +PDI +Y LL+G ++ ++
Sbjct: 274 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIES 333
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M G +PD+++Y +I+ C A + DEA +L M + KP + TLING
Sbjct: 334 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLING 393
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
R+ +AL F + G P TYN ++ + R A + + K G
Sbjct: 394 YCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLE 453
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I+LH L K T+EA +F+ + + T+ I++ ++D A ++
Sbjct: 454 LSTYNIILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKCGRMDEAKDLF 512
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
A G++P + YS + +L + L++ F M + G ++ +++ + L
Sbjct: 513 AAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 572
Query: 305 G 305
G
Sbjct: 573 G 573
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 143/308 (46%), Gaps = 1/308 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + +N ++ C S + A KM+ +P++ +Y+ L+ +
Sbjct: 235 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 294
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ M G EPD+ +Y ++ HC R E+ +LF M KP + T
Sbjct: 295 STEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 354
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G ++ EA + G +P+ TY ++ YC R++DA + EM G
Sbjct: 355 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 414
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+I+L L RT A ++ ++ K GT+ +STY I++ C N D A
Sbjct: 415 VSPNIITYNIILQGLFHTRRTAAAKELYVSIT-KSGTQLELSTYNIILHGLCKNNLTDEA 473
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+R++ + + ++ +I +L ++D+A F G+ P + +S + +
Sbjct: 474 LRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAEN 533
Query: 301 LRDEGMEE 308
L ++G E
Sbjct: 534 LIEQGSLE 541
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 157/328 (47%), Gaps = 12/328 (3%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD---PDIKSYTILLEGW-- 55
M + G ++ +N L+ LC + A E+ M R PD+ SY +L G+
Sbjct: 154 MTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFK 213
Query: 56 -GQQKNLLSMN-----EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
G Q L + EV M +G PD ++Y +++ +CS+ + EA+ ++M +
Sbjct: 214 EGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 273
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+P+ + +L+N L R +EA + F KRG EP+ TY ++ +C R+ ++
Sbjct: 274 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIES 333
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
++ D M + G+ P+ TY+ ++ AG+ +EA + M G +P + TY ++
Sbjct: 334 EKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV-SVGVKPDIVTYGTLIN 392
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+C +++D A+ ++ EM + GV P + Y+ ++ L H + A + + + G +
Sbjct: 393 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 452
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKI 317
++ + L + + A+ + Q +
Sbjct: 453 ELSTYNIILHGLCKNNLTDEALRMFQNL 480
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 133/279 (47%), Gaps = 1/279 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL+ ++ + L+ CK V ++++FD M + PDI +Y L++G
Sbjct: 305 MTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 364
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ M G +PD+V+YG +IN +C R D+A+ LF+EM ++ P+ +
Sbjct: 365 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 424
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ GL +R + A + + K G + E TYN ++ C + ++A RM +
Sbjct: 425 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 484
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TRT++I++ L+K GR +EA +F S G P V TY ++ ++
Sbjct: 485 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN-GLVPDVRTYSLMAENLIEQGSLEEL 543
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
++ M+ G M ++++ L + A Y
Sbjct: 544 DDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 582
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 145/354 (40%), Gaps = 53/354 (14%)
Query: 27 ERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG---FEPDVVSY 83
E A+ VFD++ +R I L + +++ Y M G P V +Y
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 95
Query: 84 GIMINAHCSAKRYD-----------------------------------EAVEL-FREME 107
I+I C A R D +A+++ R M
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFF---GQSKKRGFEPEAPTYNAVVGAY---- 160
C P + L+ GL E R EAL+ + G P+ +YN V+ +
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 161 ----CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
+ ++ A +++ M K G+ P+ TY+ +LH +G+ +EA K+M R G
Sbjct: 216 IQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM-RSDG 274
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
EP V TY ++ C N + A +I+D M RG+ P + Y TL+ C E ++ ++
Sbjct: 275 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESE 334
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTPLVDRG 329
K F M+ IG++P ++ L G M+E +LA + K +V G
Sbjct: 335 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 388
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/152 (19%), Positives = 63/152 (41%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
+ K G + EL +N ++ LCK+ + A +F + + +++ I++ +
Sbjct: 445 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 504
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +G PDV +Y +M +E +LF ME C + +
Sbjct: 505 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 564
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
++ L ++ A + ++ F EA T
Sbjct: 565 IVRKLLQRGDITRAGTYLFMIDEKHFSLEAST 596
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 151/322 (46%), Gaps = 1/322 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+ L FN I LC+ + A + D + + PD+ +Y L+ G + N++
Sbjct: 244 KKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVV 303
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ ++ + G EPD +Y +I+ +C A ++ + P +C+LI
Sbjct: 304 EAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLI 363
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL + AL F + +G +P YN ++ C I A +MM+EM + G
Sbjct: 364 NGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCS 423
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
+ TY++V++ L K G +A ++ K G P V T+ ++ +C +++ ++
Sbjct: 424 SDIWTYNLVINGLCKMGCVSDANNLMNDAIAK-GYVPDVFTFNTLIDGYCKQLKMETTIQ 482
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
I ++M + GV P + Y++++N L K +D + F+ M++ G P ++ L ++L
Sbjct: 483 ILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLC 542
Query: 303 DEGMEETAVVLAQKIDKLRKTP 324
G A+ L +I TP
Sbjct: 543 KAGKVNEALDLVDEILNKGITP 564
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 142/297 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + +N LI LC+ + +A ++ ++M + DI +Y +++ G + +
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N + + G+ PDV ++ +I+ +C + + +++ +M + P + +++NG
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNG 505
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + ++ F ++G P TYN + + C + ++N+A ++DE+ GI P+
Sbjct: 506 LSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPD 565
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ ++ G + AY +F+RM + T +TY I++ F + M +++
Sbjct: 566 TVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLF 625
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM A G P + Y +I+ C D K+ EM++ G P F + L
Sbjct: 626 LEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCL 682
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 139/316 (43%), Gaps = 36/316 (11%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
V+ A +VF++M +P + SY ++ + ++V+ MK+ G PDV ++ I
Sbjct: 92 VQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTI 151
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
I + C KR A+ L M + C+ + +CT++ G E EA + F + G
Sbjct: 152 RIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIG 211
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ T+N ++ C + ++ R+++++ K G+ N T++I + L + G A
Sbjct: 212 IFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAM 271
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFC--------------------------YNAQVD- 238
S+ + R+ G P V TY ++ C YN +D
Sbjct: 272 SMLDSVIRE-GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDG 330
Query: 239 ---MAM-----RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
M M +I +G +P Y +LIN LC D++D A F L G++P
Sbjct: 331 YCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPT 390
Query: 291 GQLFSNLKQALRDEGM 306
L++ L + L EG+
Sbjct: 391 VILYNMLIKGLCQEGL 406
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 132/290 (45%), Gaps = 2/290 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ +N +I+ LCK V A + + + + PD+ ++ L++G+ +Q
Sbjct: 417 MSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLK 476
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + ++ +M G PDV++Y ++N A + ++ +E F M C P+ +
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNI 536
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKC 179
L L +++EAL + +G P+ ++ ++ + + + AY++ M +
Sbjct: 537 LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQY 596
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+ T TY+I+++ + +F M G P TY +++ FC D
Sbjct: 597 KVSHTTATYNIMINAFAEKLDLHMGEKLFLEMG-AGGCAPDTYTYRVMIDGFCITGNTDS 655
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ EM +G +P + + +IN LC + ++ +A M+ GI P
Sbjct: 656 GYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 3/264 (1%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
Y ++ +G++ + +V+ M EP V+SY ++N + + +A ++F M+
Sbjct: 79 YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMK 138
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV-GAYCWSMRI 166
P + F I KR AL+ +G + A Y VV G Y + R+
Sbjct: 139 NVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRV 198
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEI 226
+AY + ++M + GI P+ T++ +LH L K G +E+ + ++ +K G + T+ I
Sbjct: 199 -EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKK-GMCSNLFTFNI 256
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
++ C + AM + D + G+ P + Y+TLI LC + +A KY ++++ G
Sbjct: 257 FIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGG 316
Query: 287 IRPPGQLFSNLKQALRDEGMEETA 310
+ P G ++ L GM + A
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNA 340
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 125/301 (41%), Gaps = 42/301 (13%)
Query: 28 RAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIM 86
+A E+F+K+K+ F + +Y +++ G N ++M V E + D + + G+
Sbjct: 22 KALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMD--IDNSLLEGVY 79
Query: 87 INAHCSAKR---YDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
I A S R EAV++F M+ NC
Sbjct: 80 IGAMKSYGRKGKVQEAVDVFERMDFYNC-------------------------------- 107
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
EP +YNA++ S A+++ M+ GI P+ T+ I + + R
Sbjct: 108 ---EPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHS 164
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A + M + V+ +V + N +V+ A ++++M G+ P + ++ L+
Sbjct: 165 ALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVE-AYELFNDMLRIGIFPDVSTFNKLL 223
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
++LC + ++ ++ + ++L G+ F+ Q L +GM A+ + + + T
Sbjct: 224 HTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLT 283
Query: 324 P 324
P
Sbjct: 284 P 284
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 64/174 (36%), Gaps = 36/174 (20%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL----------- 61
+N L ++LCK+ V A ++ D++ + PD S+ ++ G+ +L
Sbjct: 534 YNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMG 593
Query: 62 ------------------------LSMNE-VYREMKDDGFEPDVVSYGIMINAHCSAKRY 96
L M E ++ EM G PD +Y +MI+ C
Sbjct: 594 EQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNT 653
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEA 150
D + EM PS F +IN L + R+ EA+ G PE
Sbjct: 654 DSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEV 707
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 150/313 (47%), Gaps = 1/313 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + FN K +++A ++F+KM++ P++ +Y L++ + +
Sbjct: 304 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 363
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ +M ++G P++V + ++ C+ +++ A EL EM P+ F TLI
Sbjct: 364 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 423
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + R+ E + + G P+A +Y ++ YC + R ++A ++ D M G+ P
Sbjct: 424 LCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPT 483
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +LH A R ++AY +F+ M RK G P V TY ++ + A ++
Sbjct: 484 EVTYNTLLHGYCSASRIDDAYCLFREMLRK-GVTPGVVTYNTILHGLFQTKRFSEAKELY 542
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
M G ++ Y+ ++N LC + +D+A K FQ + G++ F+ + AL
Sbjct: 543 LNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKG 602
Query: 305 GMEETAVVLAQKI 317
G +E A+ L I
Sbjct: 603 GRKEDAMDLFAAI 615
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 159/325 (48%), Gaps = 15/325 (4%)
Query: 13 FNRLIDTLCKSRHVERAQEVF-DKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
N+L+ LC + V A +V +M + PD SY+ILL+G+ + E+ R M
Sbjct: 136 INQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMM 195
Query: 72 KDD---GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+D P+VV+Y +I+ C A+ +D A +F++M KP+ + LI+G S
Sbjct: 196 ANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSI 255
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ E +Q + RG +P+ TY +++ C +++ + +D M + G+ P+ +
Sbjct: 256 GKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHHIF 312
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+I K G ++A +F +M R+ G P V Y ++ C +VD A +++M
Sbjct: 313 NIFFSAYAKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 371
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG--M 306
GV P + ++++L+ LC DK + A + EMLD GI P F+ L L + G M
Sbjct: 372 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 431
Query: 307 EETAVV-----LAQKIDKLRKTPLV 326
E ++ + + D TPL+
Sbjct: 432 EGRRLIDLMEHVGVRPDAFSYTPLI 456
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 147/324 (45%), Gaps = 1/324 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + ++ LID LCK V+ A+ F++M P+I + L+ G
Sbjct: 335 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 394
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+ EM D G P+ V + +I C+ R E L ME +P +
Sbjct: 395 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 454
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G R EA + F G P TYN ++ YC + RI+DAY + EM + G
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 514
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P TY+ +LH L + R EA ++ M GT+ + TY I++ C + VD A
Sbjct: 515 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS-GTKCDIYTYNIILNGLCKSNCVDEA 573
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+++ + ++G+ + ++ +I +L + +DA F + G+ P + + +
Sbjct: 574 FKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAEN 633
Query: 301 LRDEGMEETAVVLAQKIDKLRKTP 324
L +EG E L ++K P
Sbjct: 634 LIEEGSLEEFDSLFSAMEKNGTAP 657
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI LC V + + D M+ PD SYT L+ G+ +V+ M
Sbjct: 417 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMV 476
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P V+Y +++ +CSA R D+A LFREM P + T+++GL KR S
Sbjct: 477 SIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFS 536
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + + G + + TYN ++ C S +++A++M + G+ N T+ I++
Sbjct: 537 EAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 596
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L+K GR E+A +F + G P V TY +V ++ ++ M+ G
Sbjct: 597 GALLKGGRKEDAMDLFAAIPAN-GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGT 655
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P M + L+ L H + A Y ++
Sbjct: 656 APNSQMLNALVRRLLHRGDISRAGAYLSKL 685
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 4/288 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + + L++ LC + D M + PD + I + +
Sbjct: 268 MSARGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 324
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +M+ G P+VV+YG +I+A C R D+A F +M P+ +F +
Sbjct: 325 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 384
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL + + A + + +G P A +N ++ C R+ + R++D M G
Sbjct: 385 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 444
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ +Y ++ AGRT+EA VF M G PT TY ++ +C +++D A
Sbjct: 445 VRPDAFSYTPLISGYCLAGRTDEAEKVFDGMV-SIGLSPTEVTYNTLLHGYCSASRIDDA 503
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
++ EM +GV P + Y+T+++ L + +A + + M++ G +
Sbjct: 504 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 551
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 140/331 (42%), Gaps = 53/331 (16%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSMNEVYR 69
+ +ID LCK++ +RA+ VF +M P+ +Y L+ G+ G+ K ++ M E
Sbjct: 210 YTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLE--- 266
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
+M G +PD +YG ++N C+ ++L E P HIF +
Sbjct: 267 KMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVE---NGLSPDHHIFNIFFSAYAKCG 323
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA-------------------- 169
+ +A+ F + ++ G P Y A++ A C R++DA
Sbjct: 324 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 383
Query: 170 -------------------YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKR 210
Y M+D+ GI PN ++ ++ +L GR E +
Sbjct: 384 SLVYGLCTVDKWERAEELVYEMLDQ----GICPNAVFFNTLICNLCNVGRVMEGRRLIDL 439
Query: 211 MSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHED 270
M G P +Y ++ +C + D A +++D M + G+ P Y+TL++ C
Sbjct: 440 MEH-VGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSAS 498
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
++DDA F+EML G+ P ++ + L
Sbjct: 499 RIDDAYCLFREMLRKGVTPGVVTYNTILHGL 529
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 110/250 (44%), Gaps = 1/250 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + + LI C + + A++VFD M P +Y LL G+
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++REM G P VV+Y +++ KR+ EA EL+ M + K + +
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + EA + F +G + T+ ++GA R DA + + G
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 619
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY +V +LI+ G EE S+F M K GT P +VR + + A
Sbjct: 620 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAM-EKNGTAPNSQMLNALVRRLLHRGDISRA 678
Query: 241 MRIWDEMKAR 250
++ R
Sbjct: 679 GAYLSKLDER 688
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 97/231 (41%), Gaps = 1/231 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL +N L+ C + ++ A +F +M ++ P + +Y +L G Q K
Sbjct: 475 MVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKR 534
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y M + G + D+ +Y I++N C + DEA ++F+ + + + + F
Sbjct: 535 FSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTI 594
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L R +A+ F G P TY V + + + M K G
Sbjct: 595 MIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 654
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
PN++ + ++ L+ G A + ++ + ST +++ +F
Sbjct: 655 TAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER-NFSVEASTTSLLISIF 704
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 114/295 (38%), Gaps = 72/295 (24%)
Query: 78 PDVVSYGIMIN-----------------------------------AHCSAKRYDEAVE- 101
P+ +Y I+I C KR EA++
Sbjct: 96 PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDV 155
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFF---GQSKKRGFEPEAPTYNAVVG 158
L + M C P + L+ G +E R EAL+ R P TY V+
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
C + + A + +M G+ PN TY+ ++H + G+ +E + ++MS + G +
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSAR-GLK 274
Query: 219 PTVSTYEIVVRMFC-----------------------YN---------AQVDMAMRIWDE 246
P TY ++ C +N +D AM I+++
Sbjct: 275 PDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNK 334
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
M+ G+ P + Y LI++LC ++DDA F +M++ G+ P +F++L L
Sbjct: 335 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 389
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 11/177 (6%)
Query: 148 PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK----AGRTEE 203
P TY+ ++G C R+ ++ + K G R DIV++ L+K R E
Sbjct: 96 PNTCTYSILIGCLCRMGRLKHSFATFGLILKTG----WRVNDIVINQLLKGLCDGKRVGE 151
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK---ARGVLPVMHMYS 260
A V + + G P +Y I+++ FC + + A+ + M R P + Y+
Sbjct: 152 AMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYT 211
Query: 261 TLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
T+I+ LC D A FQ+M+D G++P ++ L G + V + +K+
Sbjct: 212 TVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKM 268
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 146/295 (49%), Gaps = 4/295 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLL 62
FGL + L+ C+ + A VF+KM K+ P+ +Y+IL+ G + L
Sbjct: 159 FGLDTHVC--TSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLE 216
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ +EM + G +P +Y ++I A C D+A+++ EM C P+ H + LI
Sbjct: 217 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILI 276
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L E ++ EA F + K G P T+NA++ YC + A++++ M K
Sbjct: 277 DRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK 336
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN RTY+ ++ L + ++ +A+ + +R+ G P TY I+V FC Q++MA
Sbjct: 337 PNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN-GLLPDRVTYNILVDGFCKEGQLNMAFN 395
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I++ M + G+ P ++ LI+ LC +L+ A M+ GI F+ L
Sbjct: 396 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 450
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N L+D CK + A +F+ M +PD ++T L++G + L N
Sbjct: 371 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 430
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M G D V++ +I+ HC + + LF M C + H F ++ LG
Sbjct: 431 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 490
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ +L+EA G+ K G P T+ ++ +C + + +M++ M++ G PN
Sbjct: 491 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 550
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I+++ L GR EEA ++ MS G P TY ++V+ ++D A +I
Sbjct: 551 TYTIIINGLCNNGRVEEAETILFSMS-SFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 609
Query: 247 MKARGVLPVMHMYSTLINSL 266
M G P H+YS L++
Sbjct: 610 MVKNGCQPNSHIYSALLSGF 629
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 146/332 (43%), Gaps = 36/332 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + FN LI+ CK V A ++ M+K P+I++Y L+EG +
Sbjct: 295 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 354
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R + D+G PD V+Y I+++ C + + A +F M + +P F
Sbjct: 355 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 414
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC------------------- 161
LI+GL RL +A G K+G + T+ A++ +C
Sbjct: 415 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 474
Query: 162 ----------------WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++N+A M+ +M K G+ P+ T+ I++ +AG T +
Sbjct: 475 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 534
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ +RM ++ G P V TY I++ C N +V+ A I M + GV P Y+ L+ +
Sbjct: 535 KMLERM-KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 593
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+LD A + M+ G +P ++S L
Sbjct: 594 HVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 625
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 138/298 (46%), Gaps = 10/298 (3%)
Query: 2 DKFGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ F LKQE+ + + LI C ++A ++ D+M + P++ +YTIL+
Sbjct: 217 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILI 276
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+ ++ + N V+R+M G P ++++ +IN +C A +L ME NCK
Sbjct: 277 DRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK 336
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ + L+ GL + +A + G P+ TYN +V +C ++N A+ +
Sbjct: 337 PNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNI 396
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ M G+ P+ T+ ++ L K GR E+A + M +K G T+ ++ C
Sbjct: 397 FNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK-GISLDEVTFTALIDGHC 455
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ +++ M L H ++ +++L + KL++A +M+ G+ P
Sbjct: 456 KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPS 513
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 18/327 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + F LID CK + +F+ M + R ++ L+ G+
Sbjct: 435 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 494
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N + +M G P VV++ I+I HC A ++++ M+ C P+ + +
Sbjct: 495 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 554
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL + R+ EA G P TY +V A+ + R++ A++++ M K G
Sbjct: 555 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 614
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSV-------FKRMSRKPGTEPTVSTYEIVVRMFCY 233
PN+ Y +L + + A ++ + +S + +S++ V R+
Sbjct: 615 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSH--VFRLM-- 670
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
VD A++I DE+K GV P +Y+ L+ LC E ++ +A + Q+M+ G+ P +
Sbjct: 671 --DVDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI 727
Query: 294 FSNLKQALR----DEGMEETAVVLAQK 316
S ++ + D +E +VL K
Sbjct: 728 SSIIEHYCKTCKYDNCLEFMKLVLDNK 754
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 41/302 (13%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
V + D M + F Y+ LL + VYR M ++GF + Y
Sbjct: 74 VVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRT 133
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
++NA C + +A E+F C ++ + G
Sbjct: 134 VVNALCK-NGFVQAAEMF--------------CCKVL--------------------RLG 158
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK---CGIGPNTRTYDIVLHHLIKAGRTE 202
F + ++V A C + +A+R+ ++M K C PN+ TY I++H L +AGR E
Sbjct: 159 FGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCR--PNSVTYSILIHGLCEAGRLE 216
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
EA+ + + M K G +P+ TY ++++ C D AM++ DEM + +P +H Y+ L
Sbjct: 217 EAFQLKQEMVEK-GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTIL 275
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRK 322
I+ LC E K+++A F++ML G+ P F+ L EG +A L ++K
Sbjct: 276 IDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNC 335
Query: 323 TP 324
P
Sbjct: 336 KP 337
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 152/370 (41%), Gaps = 44/370 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + P ++ L+ L K A V+ +M F Y ++ +
Sbjct: 84 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 143
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
+ + ++ GF D ++ A+C EA +F +M + +C+P+ +
Sbjct: 144 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYS 203
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI+GL RL EA Q + ++G +P TY ++ A C + A +M+DEM
Sbjct: 204 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 263
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------- 232
PN TY I++ L + G+ EEA VF++M K G P + T+ ++ +C
Sbjct: 264 ACVPNVHTYTILIDRLCREGKIEEANGVFRKM-LKHGLCPGIITFNALINGYCKEGWVVS 322
Query: 233 -------------------YNAQVDMAMRIWDEMKA---------RGVLPVMHMYSTLIN 264
YN ++ R+ KA G+LP Y+ L++
Sbjct: 323 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 382
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQ------KI 317
C E +L+ A F M G+ P G F+ L L G +E+ +L +
Sbjct: 383 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 442
Query: 318 DKLRKTPLVD 327
D++ T L+D
Sbjct: 443 DEVTFTALID 452
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 99/257 (38%), Gaps = 37/257 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + +I+ LC + VE A+ + M P+ +Y +L++ +
Sbjct: 540 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 599
Query: 61 LLSMNEVYREMKDDGFEPD------VVSYGIMINAHCSAKRYDEAVEL------------ 102
L ++ M +G +P+ ++S ++ N A+ +L
Sbjct: 600 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 659
Query: 103 -------FREM----------EATNCK-PSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
FR M E C P+ ++ L+ GL E R+ EA Q K
Sbjct: 660 NCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 719
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
G P+ ++++ YC + + ++ M + P+ +Y V+H L GR +EA
Sbjct: 720 GLFPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 778
Query: 205 YSVFKRMSRKPGTEPTV 221
+ + R G E V
Sbjct: 779 QKLVSDLVRHTGIEEEV 795
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 145/289 (50%), Gaps = 1/289 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +I+ C++ +V RA EVFD+ +P+ +Y L+ G+ + + + + +M+
Sbjct: 175 YSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQ 234
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + + + MI+ +C D+A+E+ ME + + + TL GL R+
Sbjct: 235 VRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 294
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA ++G P +Y ++ +C + +A R+ EM G P+ TY++++
Sbjct: 295 EAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMM 354
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
IK G EA FK K G P + +Y +V C N +VD+A+R+++EMK RG
Sbjct: 355 DGYIKKGSIREA-ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 413
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
P + Y+ LI+ L E + ++A + + ML G+ P L+S L +L
Sbjct: 414 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 462
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 158/313 (50%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + + L+D L +R + + + VF++MK + D+ Y+ ++ + + N
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 187
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EV+ E +G EP+ +YG +IN C + + A L +M+ + +F T
Sbjct: 188 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 247
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + + +AL+ +K G E + TYN + + R+++A ++ M + G
Sbjct: 248 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 307
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN +Y ++ G EA +F+ M+ G EP++ TY +++ + + A
Sbjct: 308 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN-GAEPSLVTYNVMMDGYIKKGSIREA 366
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R +EM+ +G++P ++ Y+ L++ C K+D A + F+EM G +P ++ L
Sbjct: 367 ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 426
Query: 301 LRDEGMEETAVVL 313
L EG E A L
Sbjct: 427 LAKEGRSEEAFQL 439
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
S +++++G+ + + ++ EM G + + + Y +++A+ K D E+ + M
Sbjct: 69 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 128
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
E +P+ + L++GL + + +++ F + K + + Y++V+ AYC + +
Sbjct: 129 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 188
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS-RKPGTEPTVSTYE 225
A + DE GI PN TY +++ K G+ E A + M R G V +
Sbjct: 189 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV--FN 246
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
++ +C VD A+ I M+ G+ ++ Y+TL L +++D+A + M++
Sbjct: 247 TMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 306
Query: 286 GIRPPGQLFSNLKQALRDEG 305
G+RP ++ L +EG
Sbjct: 307 GVRPNHVSYTTLISIHCNEG 326
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + LI C + A+ +F +M +P + +Y ++++G+ ++ ++
Sbjct: 307 GVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREA 366
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM+ G PD+ SY +++ HC + D A+ LF EM+ KP+ + LI+G
Sbjct: 367 ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 426
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
L E R EA Q + G P+ Y+A+VG+
Sbjct: 427 LAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGS 461
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 96/195 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G++ ++ +N L L ++ ++ A+ + M ++ P+ SYT L+ + +
Sbjct: 268 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 327
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++REM +G EP +V+Y +M++ + EA EME P + +
Sbjct: 328 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 387
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ AL+ F + K+RG +P Y A++ R +A+++ D M G
Sbjct: 388 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 447
Query: 181 IGPNTRTYDIVLHHL 195
+ P+ Y ++ L
Sbjct: 448 LTPDDALYSALVGSL 462
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 11/249 (4%)
Query: 78 PDVV---SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK---RL 131
PD V S ++++ +C + R A +L EM K + + +L++ EK R+
Sbjct: 62 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 121
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+E L+ + G EP TY +V + I + +EM+ + + Y V
Sbjct: 122 AEMLKVM---ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSV 178
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ +AG A VF G EP TY ++ FC Q++ A + +M+ RG
Sbjct: 179 INAYCRAGNVRRASEVFDECVGN-GIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 237
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETA 310
V +++T+I+ C ++ +D A + M +GI ++ L LR M+E
Sbjct: 238 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAK 297
Query: 311 VVLAQKIDK 319
+L I+K
Sbjct: 298 NLLRIMIEK 306
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L +N ++D K + A+ ++M+K+ PDI SY L+ G +
Sbjct: 342 GAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVA 401
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMK G +P++V+Y +I+ R +EA +L+ M P ++ L+
Sbjct: 402 LRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGS 461
Query: 125 LGSEKR 130
L ++K+
Sbjct: 462 LHTDKK 467
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 150/307 (48%), Gaps = 4/307 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + L+D LCK ++ A + D+M+ P Y +L++G ++ +L + +
Sbjct: 219 LPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTK 278
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M G P+ V+Y +I+ C + D+AV L M ++ C P+ + TLINGL
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++R ++A++ ++RG+ Y+ ++ + +A + +M + G PN
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV 398
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
Y +++ L + G+ EA + RM G P TY +++ F + A+++W E
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILNRMI-ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKE 457
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGM 306
M G YS LI+ LC ++ +A + +ML IGI+P +S++ + L G
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517
Query: 307 EETAVVL 313
+ A+ L
Sbjct: 518 MDAALKL 524
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 154/323 (47%), Gaps = 5/323 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIK----SYTILLEGWG 56
+D+F K+ + FN +++ + R E +D + + +I S+ ++++
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+ + + EV+R M + PD +Y +++ C +R DEAV L EM++ C PSP
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
I+ LI+GL + L+ + +G P TYN ++ C +++ A +++ M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
PN TY +++ L+K R +A + M + G Y +++ +
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER-GYHLNQHIYSVLISGLFKEGK 377
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+ AM +W +M +G P + +YS L++ LC E K ++A + M+ G P +S+
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 297 LKQALRDEGMEETAVVLAQKIDK 319
L + G+ E AV + +++DK
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDK 460
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 141/295 (47%), Gaps = 7/295 (2%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+D LK +P+ +N LI LC +++A + ++M + P+ +Y L+ G +
Sbjct: 280 VDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK 339
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
Q+ + M++ G+ + Y ++I+ + +EA+ L+R+M CKP+ +
Sbjct: 340 QRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVV 399
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L++GL E + +EA + + G P A TY++++ + + +A ++ EM
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K G N Y +++ L GR +EA V+ +M G +P Y +++ C +
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM-LTIGIKPDTVAYSSIIKGLCGIGSM 518
Query: 238 DMAMRIWDEMKAR---GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
D A++++ EM + P + Y+ L++ LC + + A MLD G P
Sbjct: 519 DAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP 573
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 129/275 (46%), Gaps = 2/275 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI+ L K R A + M++R + + Y++L+ G ++ ++R+M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G +P++V Y ++++ C + +EA E+ M A+ C P+ + + +L+ G
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCE 449
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA+Q + + K G Y+ ++ C R+ +A + +M GI P+T Y ++
Sbjct: 450 EAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Query: 193 HHLIKAGRTEEAYSVFKRM--SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
L G + A ++ M +P ++P V TY I++ C + A+ + + M R
Sbjct: 510 KGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDR 569
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
G P + +T +N+L + D + F E L +
Sbjct: 570 GCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK G + ++ LID LC V+ A V+ KM PD +Y+ +++G +
Sbjct: 458 MDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS 517
Query: 61 LLSMNEVYREM---KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + ++Y EM ++ +PDVV+Y I+++ C K AV+L M C P
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
T +N L SEK S K R F E +V R++ A +++ M
Sbjct: 578 CNTFLNTL-SEKSNS-------CDKGRSFLEE------LVVRLLKRQRVSGACTIVEVML 623
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEA 204
+ P T T+ +++ + K + A
Sbjct: 624 GKYLAPKTSTWAMIVREICKPKKINAA 650
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 158/320 (49%), Gaps = 2/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G ++ +N LI LCK ++ A+E+ ++M+ + +P++ +YTIL++ + ++
Sbjct: 380 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 439
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L V EM G + V Y +I+A C ++ +A+ +F +M + CKP F +
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI GL + EAL + G TYN ++ A+ + +A +++++M G
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY+ ++ L +AG E+ ++F+ M K G P + I++ C + A
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK-GLNPNNISCNILINGLCRTGNIQHA 618
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +M RG+ P + Y++LIN LC + +A F ++ GI P ++ L
Sbjct: 619 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 678
Query: 301 LRDEGMEETA-VVLAQKIDK 319
EGM + A ++L++ +D
Sbjct: 679 HCKEGMFDDAHLLLSRGVDS 698
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 151/306 (49%), Gaps = 2/306 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVF-DKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
FN LI+ ++ A+ V + M PDI +Y L+ G ++ L+S E+ EM
Sbjct: 356 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G EP+V++Y I+I+ C R +EA + EM + + LI+ L ++++
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+AL FG +G +P+ T+N+++ C + +A + +M G+ NT TY+ +
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+H ++ G +EA + M + G TY +++ C ++ + ++++M ++G
Sbjct: 536 IHAFLRRGAMQEALKLVNDMLFR-GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ P + LIN LC + A ++ ++M+ G+ P +++L L G + A+
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654
Query: 312 VLAQKI 317
L K+
Sbjct: 655 NLFDKL 660
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 148/310 (47%), Gaps = 13/310 (4%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD FN I LCK + A ++ D+M R F P+ +Y +L+ G L M +
Sbjct: 284 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHG------LCRMGK 337
Query: 67 V--YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFRE-MEATNCKPSPHIFCTLIN 123
V R + + P+VV + +IN + S R DEA + E M + C P + TLI
Sbjct: 338 VDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 397
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL + L A + + + +G EP TY ++ +C R+ +A ++DEM G+
Sbjct: 398 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 457
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N Y+ ++ L K + ++A ++F MS K G +P + T+ ++ C + + A+ +
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSK-GCKPDIFTFNSLIFGLCKVNKFEEALGL 516
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ +M GV+ Y+TLI++ + +A K +ML G ++ L +AL
Sbjct: 517 YQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 576
Query: 304 EGMEETAVVL 313
G E + L
Sbjct: 577 AGNIEKGLAL 586
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 32/300 (10%)
Query: 42 DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE 101
+P +SY ++L+ + V+ EM G P V ++G+++ A C D A
Sbjct: 179 EPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACA 238
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L ++M C P+ ++ TLI+ L R++E L+ + G P+ T+N + C
Sbjct: 239 LLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLC 298
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL-------------------------- 195
+RI++A +++D M G PN+ TY +++H L
Sbjct: 299 KMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNT 358
Query: 196 -----IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+ GR +EA +V G P + TY ++ C + A + +EM+ +
Sbjct: 359 LINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK 418
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEET 309
G P + Y+ LI+ C E +L++A EM G+ ++ L AL +DE +++
Sbjct: 419 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 478
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 145/336 (43%), Gaps = 33/336 (9%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N ++D L + VF +M + P + ++ ++++ + S + ++M
Sbjct: 184 SYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDM 243
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
G P+ + Y +I+A R +E ++L EM C P + F I+GL R+
Sbjct: 244 TRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 303
Query: 132 SEALQFFGQSKKRGFEPEAPTY-------------------------------NAVVGAY 160
EA + + RGF P + TY N ++ Y
Sbjct: 304 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGY 363
Query: 161 CWSMRINDAYRMMDE-MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
R+++A +M E M G GP+ TY+ ++ L K G A + M K G EP
Sbjct: 364 VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIK-GCEP 422
Query: 220 TVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYF 279
V TY I++ FC +++ A + DEM +G+ Y+ LI++LC ++K+ DA F
Sbjct: 423 NVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMF 482
Query: 280 QEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+M G +P F++L L E A+ L Q
Sbjct: 483 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 518
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 3/232 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G K ++ FN LI LCK E A ++ M + +Y L+ + ++
Sbjct: 485 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ +M G D ++Y +I A C A ++ + LF +M + P+ +I C
Sbjct: 545 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPN-NISCN 603
Query: 121 -LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LINGL + AL+F RG P+ TYN+++ C + R +A + D+++
Sbjct: 604 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 663
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
GI P+ TY+ ++ K G ++A+ + R G P T+ I+V F
Sbjct: 664 GICPDAITYNTLISWHCKEGMFDDAHLLLSR-GVDSGFIPNEVTWYILVSNF 714
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +N LI + ++ A ++ + M R D +Y L++ + N+
Sbjct: 524 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 583
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ +M G P+ +S I+IN C A+E R+M P + +LING
Sbjct: 584 LALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLING 643
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L R EAL F + + G P+A TYN ++ +C +DA+ ++ G PN
Sbjct: 644 LCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 703
Query: 185 TRTYDIVLHHLIKAGRTE 202
T+ I++ + IK G E
Sbjct: 704 EVTWYILVSNFIKEGDQE 721
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 64/134 (47%)
Query: 172 MMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMF 231
++ +M++ GI + +++ H +AG +A + M EPT +Y +V+ +
Sbjct: 133 LLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVL 192
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
+ ++ EM ++G+ P ++ + ++ +LC +++D AC ++M G P
Sbjct: 193 LAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNA 252
Query: 292 QLFSNLKQALRDEG 305
++ L AL G
Sbjct: 253 IVYQTLIHALXKVG 266
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 146/297 (49%), Gaps = 2/297 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK + +N L+ LC++ + V D+M R+ PD +Y+IL +G + +
Sbjct: 249 MLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGD 308
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+M ++ E G + + I++N C + +A E+ + + + + I+ T
Sbjct: 309 SQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNT 368
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LING L A F Q K R P+ TYNA++ RI +A+ ++ EM K G
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T++ ++ +AG+ E+ + + M K G +P V +Y +V FC N ++ A
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEK-GLKPNVVSYGSIVNAFCKNGKILEA 487
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ I D+M + VLP +Y+ +I++ D A ++M G+ PP + NL
Sbjct: 488 VAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGV-PPSIVTYNL 543
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 156/325 (48%), Gaps = 9/325 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL Q +N LI+ C+ +E A +F +MK R PD +Y L+ G G+ + +
Sbjct: 358 GLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEA 417
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ EM+ +G P V ++ +I+A+ A + ++ + +M+ KP+ + +++N
Sbjct: 418 HDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNA 477
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ EA+ + P A YNA++ AY + A+ + ++M+ G+ P+
Sbjct: 478 FCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPS 537
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY++++ L K + EA + + R G P V +Y ++ CY + D A+ +
Sbjct: 538 IVTYNLLIKGLCKQSQISEAEELLDSL-RNYGLAPDVISYNTLISACCYRSNTDRALELE 596
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
EM G+ P Y L +SL ++ + +Q+MLD + P +++ + A
Sbjct: 597 KEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKC 656
Query: 305 GMEETAVVLAQKIDKLRKTPLVDRG 329
G E K++ LRK + D+G
Sbjct: 657 GEE-------SKVEALRKE-MSDKG 673
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 136/277 (49%), Gaps = 5/277 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ L K + A ++ +M+K +P ++++ L++ +G+ L + +M+
Sbjct: 401 YNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQ 460
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G +P+VVSYG ++NA C + EAV + +M + P ++ +I+
Sbjct: 461 EKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTD 520
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + K G P TYN ++ C +I++A ++D +R G+ P+ +Y+ ++
Sbjct: 521 QAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLI 580
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
T+ A + K M K G +P+ TY ++ +V ++ +M + V
Sbjct: 581 SACCYRSNTDRALELEKEM-WKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDV 639
Query: 253 LPVMHMYSTLINSL--CHEDKLDDACKYFQEMLDIGI 287
+P +Y+ ++++ C E+ +A + +EM D GI
Sbjct: 640 VPCSGIYNIMVDAYAKCGEESKVEALR--KEMSDKGI 674
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 151/340 (44%), Gaps = 36/340 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I L K+ A ++FD+M ++ P+ +Y +++G ++ +L S ++ +M
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P+V++Y ++++ C A R E + EM + P + L +G
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQ 310
Query: 133 EALQFFGQSKKRGFEPEAPT-----------------------------------YNAVV 157
L F +S K+G + A T YN ++
Sbjct: 311 TMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLI 370
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
YC + A+ + +M+ I P+ TY+ +++ L K R EA+ + M K G
Sbjct: 371 NGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEM-EKNGV 429
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
P+V T+ ++ + Q++ I +M+ +G+ P + Y +++N+ C K+ +A
Sbjct: 430 NPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVA 489
Query: 278 YFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+M + P Q+++ + A + G + A +LA+K+
Sbjct: 490 ILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKM 529
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 124/280 (44%), Gaps = 3/280 (1%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGF-EPDVV 81
RH + + F+ + R PD ++ ++ +L + R M DG P+
Sbjct: 131 GRHAD-VRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAF 189
Query: 82 SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQS 141
SY ++I A +AV+LF EM P+ + T+I+G + L + + Q
Sbjct: 190 SYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQM 249
Query: 142 KKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRT 201
+ G +P TYN ++ C + R+ + ++DEM + P+ TY I+ + G +
Sbjct: 250 LRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDS 309
Query: 202 EEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYST 261
+ S+F+ S K G + T I++ C + ++ A + + G+L +Y+T
Sbjct: 310 QTMLSLFEE-SVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNT 368
Query: 262 LINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
LIN C L+ A FQ+M IRP ++ L L
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL 408
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 4/242 (1%)
Query: 78 PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC--TLINGLGSEKRLSEAL 135
PD ++ + A A DEAV + R M + P+P+ F +I GL +A+
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRM-GCDGAPAPNAFSYNVVIAGLWKAGTDCDAV 208
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
+ F + ++ P TYN ++ + + +R+ +M + G+ PN TY+++L L
Sbjct: 209 KLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGL 268
Query: 196 IKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPV 255
+AGR E +V M+ + P TY I+ + +++E +GV
Sbjct: 269 CRAGRMGETAAVLDEMASRK-MVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIG 327
Query: 256 MHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQ 315
+ S L+N LC + K+ A + Q +++ G+ +++ L G E A + Q
Sbjct: 328 AYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQ 387
Query: 316 KI 317
++
Sbjct: 388 QM 389
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 146/295 (49%), Gaps = 4/295 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLL 62
FGL + L+ C+ + A VF+KM K+ P+ +Y+IL+ G + L
Sbjct: 225 FGLDTHVC--TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLE 282
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
++ +EM + G +P +Y ++I A C D+A+++ EM C P+ H + LI
Sbjct: 283 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILI 342
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ L E ++ EA F + K G P T+NA++ YC + A++++ M K
Sbjct: 343 DRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK 402
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN RTY+ ++ L + ++ +A+ + +R+ G P TY I+V FC Q++MA
Sbjct: 403 PNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN-GLLPDRVTYNILVDGFCKEGQLNMAFN 461
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
I++ M + G+ P ++ LI+ LC +L+ A M+ GI F+ L
Sbjct: 462 IFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 516
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD +N L+D CK + A +F+ M +PD ++T L++G + L N
Sbjct: 437 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 496
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M G D V++ +I+ HC + + LF M C + H F ++ LG
Sbjct: 497 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 556
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
+ +L+EA G+ K G P T+ ++ +C + + +M++ M++ G PN
Sbjct: 557 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 616
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY I+++ L GR EEA ++ MS G P TY ++V+ ++D A +I
Sbjct: 617 TYTIIINGLCNNGRVEEAETILFSMS-SFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVST 675
Query: 247 MKARGVLPVMHMYSTLINSL 266
M G P H+YS L++
Sbjct: 676 MVKNGCQPNSHIYSALLSGF 695
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 146/332 (43%), Gaps = 36/332 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K GL + FN LI+ CK V A ++ M+K P+I++Y L+EG +
Sbjct: 361 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 420
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R + D+G PD V+Y I+++ C + + A +F M + +P F
Sbjct: 421 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 480
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC------------------- 161
LI+GL RL +A G K+G + T+ A++ +C
Sbjct: 481 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 540
Query: 162 ----------------WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
++N+A M+ +M K G+ P+ T+ I++ +AG T +
Sbjct: 541 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 600
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ +RM ++ G P V TY I++ C N +V+ A I M + GV P Y+ L+ +
Sbjct: 601 KMLERM-KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 659
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+LD A + M+ G +P ++S L
Sbjct: 660 HVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 691
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 138/297 (46%), Gaps = 10/297 (3%)
Query: 2 DKFGLKQELPD---------FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
+ F LKQE+ + + LI C ++A ++ D+M + P++ +YTIL+
Sbjct: 283 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILI 342
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+ ++ + N V+R+M G P ++++ +IN +C A +L ME NCK
Sbjct: 343 DRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCK 402
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ + L+ GL + +A + G P+ TYN +V +C ++N A+ +
Sbjct: 403 PNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNI 462
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+ M G+ P+ T+ ++ L K GR E+A + M +K G T+ ++ C
Sbjct: 463 FNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK-GISLDEVTFTALIDGHC 521
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +++ M L H ++ +++L + KL++A +M+ G+ P
Sbjct: 522 KIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 578
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 152/370 (41%), Gaps = 44/370 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + P ++ L+ L K A V+ +M F Y ++ +
Sbjct: 150 MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGF 209
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFC 119
+ + ++ GF D ++ A+C EA +F +M + NC+P+ +
Sbjct: 210 VQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYS 269
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
LI+GL RL EA Q + ++G +P TY ++ A C + A +M+DEM
Sbjct: 270 ILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK 329
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------- 232
PN TY I++ L + G+ EEA VF++M K G P + T+ ++ +C
Sbjct: 330 ACVPNVHTYTILIDRLCREGKIEEANGVFRKM-LKHGLCPGIITFNALINGYCKEGWVVS 388
Query: 233 -------------------YNAQVDMAMRIWDEMKA---------RGVLPVMHMYSTLIN 264
YN ++ R+ KA G+LP Y+ L++
Sbjct: 389 AFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVD 448
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQ------KI 317
C E +L+ A F M G+ P G F+ L L G +E+ +L +
Sbjct: 449 GFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISL 508
Query: 318 DKLRKTPLVD 327
D++ T L+D
Sbjct: 509 DEVTFTALID 518
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 142/345 (41%), Gaps = 24/345 (6%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + F LID CK + +F+ M + R ++ L+ G+
Sbjct: 501 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 560
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L N + +M G P VV++ I+I HC A ++++ M+ C P+ + +
Sbjct: 561 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 620
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL + R+ EA G P TY +V A+ + R++ A++++ M K G
Sbjct: 621 IINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNG 680
Query: 181 IGPNTRTYDIVLHHLIKAGRT--------------------EEAYSVFKRMSRKPGTEPT 220
PN+ Y +L + + E + +K G PT
Sbjct: 681 CQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGV-PT 739
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
Y +V C ++ A ++ +M G+ P + S++I C K D+ ++ +
Sbjct: 740 EDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYDNCLEFMK 798
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPL 325
+LD P + + LR+EG + A L D +R T +
Sbjct: 799 LVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVS--DLVRHTGI 841
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 106/275 (38%), Gaps = 54/275 (19%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K+GL + LI+ C++ + ++ ++MK+ P++ +YTI++ G
Sbjct: 571 MMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR 630
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G P+ +Y +++ AH A R D A ++ M C+P+ HI+
Sbjct: 631 VEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSA 690
Query: 121 LING--LGSEKRLSEALQFFGQSKKRGFEPE---------------APT---YNAVVGAY 160
L++G L + + AL G R E PT YN +V
Sbjct: 691 LLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGL 750
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTR---------------------------------- 186
C RI +A ++ +M K G+ P+
Sbjct: 751 CKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFA 810
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+Y V+H L GR +EA + + R G E V
Sbjct: 811 SYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEV 845
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 138/287 (48%), Gaps = 1/287 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K G+ L FN I LC+ ++ A + + + PD+ SY L+ G+ + L+
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+M + G EP+ +Y +IN C A A ++ R+ P + +LI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
NGL ++ ++ A+ F ++ ++GF+ YN +V + A ++M +M + G
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P+ TY++V++ L K G +A + K G P + T+ ++ +C +D A+
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAK-GCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
I D M + G+ P + Y+TL+N LC KLD+ F+ ML+ G P
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 135/286 (47%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K + +N L+ L K V +A ++ M + PDI +Y +++ G + L
Sbjct: 386 GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N + + G PD+ ++ +I+ +C + D+A+E+ M + P + TL+NG
Sbjct: 446 NGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG 505
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++L + F ++G P TYN ++ ++C ++++A + EM+ G+ P+
Sbjct: 506 LCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPD 565
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T ++ L G ++AY +F + ++ + + + I++ FC V MA +++
Sbjct: 566 IVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLF 625
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+M P + Y +I+S C +D A + E + G+ P
Sbjct: 626 HKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPS 671
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 136/290 (46%), Gaps = 2/290 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G ++ +N +++ LCK + A + + + PDI ++ L++G+ +Q+N
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ E+ M G PDV++Y ++N C A++ D V+ F+ M C P+ +
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-C 179
LI ++++SEA++ F + K RG P+ T ++ C + ++ AY + + K
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
+T ++I+++ A +F +M P TY +++ +C +D+
Sbjct: 597 KFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMG-GSDCAPDNYTYRVMIDSYCKTGNIDL 655
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
A E ++G++P ++N LC +L +A M+ GI P
Sbjct: 656 AHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 143/302 (47%), Gaps = 2/302 (0%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
V+ A VF++M +P ++SY ++ + ++VY MKD G PDV ++ I
Sbjct: 92 VQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTI 151
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+ + C R A+ L M C+ + +C +I+G E EA F + K+G
Sbjct: 152 RMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQG 211
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ T+N ++ C + ++ ++ ++ K G+ PN T++I + L + G +EA
Sbjct: 212 ICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAA 271
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ + + + G P V +Y ++ FC ++++ A +M GV P Y+T+IN
Sbjct: 272 RLLESIVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKIDKLRKTP 324
C + +A K ++ + G P +S+L L ++G M V + ++K K
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390
Query: 325 LV 326
++
Sbjct: 391 II 392
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 146/320 (45%), Gaps = 40/320 (12%)
Query: 29 AQEVFDKMKKRR-FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD--DGFEPDVVSYGI 85
A ++F+++K F +++Y ++E G +M +V EM+ D + V GI
Sbjct: 23 ALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGI 82
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
M + + + EAV +F M+ +C+PS + ++N L S+A + + + K G
Sbjct: 83 MRD-YGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIG 141
Query: 146 FEPEAPTYNAVVGAYCWSMR-------IND----------------------------AY 170
P+ T+ + ++C + R +N+ AY
Sbjct: 142 IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAY 201
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
+ DEM K GI P+ T++ ++H L K G +E+ +F ++ ++ G P + T+ I ++
Sbjct: 202 HLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKR-GVCPNLFTFNIFIQG 260
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
C +D A R+ + + + G+ P + Y+TLI C KL +A Y +M++ G+ P
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320
Query: 291 GQLFSNLKQALRDEGMEETA 310
++ + GM + A
Sbjct: 321 EFTYNTIINGFCKAGMMQNA 340
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 140/324 (43%), Gaps = 36/324 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLE------- 53
MD + + + +N +++ L + + +A +V+ +MK PD+ ++TI ++
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGR 161
Query: 54 ------------GWGQQKNLLSMNEV----------------YREMKDDGFEPDVVSYGI 85
G G + N +S V + EM G PD++++
Sbjct: 162 PTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ C E+ +LF ++ P+ F I GL + + EA + G
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
P+ +YN ++ +C ++ +A + +M G+ PN TY+ +++ KAG + A
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNAD 341
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ + K G P TY ++ C + ++ AM ++ E +G + +Y+TL+
Sbjct: 342 KILRDAMFK-GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400
Query: 266 LCHEDKLDDACKYFQEMLDIGIRP 289
L + + A + ++M++ G P
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSP 424
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 124/269 (46%), Gaps = 3/269 (1%)
Query: 58 QKNLLSMNEVYREMK-DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSP 115
Q + L+ +++ ++K +DGF+ + +Y MI +++ ++ EM + + K
Sbjct: 17 QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLE 76
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
++ ++ G + ++ EA+ F + EP +YNA++ + A+++
Sbjct: 77 GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M+ GI P+ T+ I + GR A + M + VS ++ + N
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
Q++ A ++DEM +G+ P + ++ LI+ LC + + ++ K F +++ G+ P F+
Sbjct: 197 QIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTP 324
Q L +G + A L + I TP
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTP 284
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 68/181 (37%), Gaps = 36/181 (19%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKS----------------- 47
G + +N LI++ CK R V A E+F +MK R PDI +
Sbjct: 526 GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKA 585
Query: 48 -------------------YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
+ I++ + + N+ +++ +M PD +Y +MI+
Sbjct: 586 YELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMID 645
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
++C D A E + PS ++N L RLSEA+ + G P
Sbjct: 646 SYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP 705
Query: 149 E 149
E
Sbjct: 706 E 706
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 149/292 (51%), Gaps = 6/292 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID LC+S ++E AQ + ++M + PD+ +YT L++G+ + NL EVY EM
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK-PSPHIFCTLINGLGSEKRL 131
G +PD +Y D+A L EM AT+ P I+ I+GL L
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+A++F + + G P+ TY V+ Y + + A + DEM + + P+ TY ++
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ KAGR E+A+ M +K G P V T+ ++ C +D A R +M+ G
Sbjct: 592 IYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG----QLFSNLKQ 299
+ P + Y+ LI+ C +K ++ K ++EMLD I P G LF +L++
Sbjct: 651 IPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 32/295 (10%)
Query: 33 FDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCS 92
F+KM ++ F P +++ I+L+ + + + VY M + G P V+++ M+++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 93 AKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
A + +++ EM+ N + S + LING ++ EA +F G ++ GF +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI---------------------- 190
+N ++ YC +DA+ + DEM GI P T TY+I
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 191 ---------VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
++H IK G+ EA +F + R P++ TY ++ C + ++ A
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDL-RAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
R+ +EM + + P + Y+TL+ L A + + EML GI+P G ++
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 134/315 (42%), Gaps = 6/315 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LI+ K+ +E A+ M++ F S+ L+EG+ +Q V EM
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML 335
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G P +Y I I A C R D+A EL M A P + TL++G +
Sbjct: 336 NAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFV 391
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA F + P TYN ++ C S + A R+ +EM I P+ TY ++
Sbjct: 392 EASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLV 451
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+K G A V+ M RK G +P Y D A R+ +EM A
Sbjct: 452 KGFVKNGNLSMATEVYDEMLRK-GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH 510
Query: 253 -LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
P + +Y+ I+ LC L A ++ +++ +G+ P ++ + + + G + A
Sbjct: 511 HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMAR 570
Query: 312 VLAQKIDKLRKTPLV 326
L ++ + R P V
Sbjct: 571 NLYDEMLRKRLYPSV 585
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
+L +N ID LCK ++ +A E K+ + PD +YT ++ G+ + +Y
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 573
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
EM P V++Y ++I H A R ++A + EM+ +P+ L+ G+
Sbjct: 574 DEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKA 633
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
+ EA ++ + ++ G P +Y ++ C + + ++ EM I P+ T+
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Query: 189 DIVLHHLIKAGRTEEA 204
+ HL K + E
Sbjct: 694 RALFKHLEKDHESREV 709
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 127 SEKRLSEA-LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++K ++E L F + ++GF P N V+ S +N A + + M + GI P
Sbjct: 179 TKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTV 238
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
T++ +L KAG E ++ M R+ E + TY I++ F N +++ A R
Sbjct: 239 ITFNTMLDSCFKAGDLERVDKIWLEMKRR-NIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+M+ G + ++ LI C + DDA EML+ GI P ++ AL D G
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 357
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 73/154 (47%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
+ GL + + +I ++ + A+ ++D+M ++R P + +Y +L+ G + L
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLE 602
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ EMK G P+V+++ ++ C A DEA +ME P+ + + LI
Sbjct: 603 QAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV 156
+ ++ E ++ + + + EP+ T+ A+
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ + N L+ +CK+ +++ A KM++ P+ SYT+L+ +
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Query: 61 LLSMNEVYREMKDDGFEPD 79
+ ++Y+EM D EPD
Sbjct: 671 WEEVVKLYKEMLDKEIEPD 689
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 154/322 (47%), Gaps = 19/322 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + ++I LC+++ V++A +F +MKK +PD+ +YTIL++ + +
Sbjct: 443 MMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGL 502
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM+ G P+VV+Y +++A+ +K+ +A ++F M C P+ +
Sbjct: 503 IEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSA 562
Query: 121 LINGLGSEKRLSEALQ----------------FFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
LI+GL + +A + +F P TY A+V C +
Sbjct: 563 LIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQ 622
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+++DA+ ++D M G PN YD ++ K G + A VF RM+ K G P+V TY
Sbjct: 623 KVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMT-KCGYLPSVHTY 681
Query: 225 -EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++ RMF + ++D+AM++ +M P + Y+ +++ LC + + A M
Sbjct: 682 TSLIDRMF-KDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLME 740
Query: 284 DIGIRPPGQLFSNLKQALRDEG 305
G P ++ L L G
Sbjct: 741 KKGCSPNVVTYTALIDGLGKAG 762
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 147/323 (45%), Gaps = 17/323 (5%)
Query: 20 LCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPD 79
LC E+A ++ +M ++ F PD +YT ++ Q K + +++EMK G PD
Sbjct: 427 LCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPD 486
Query: 80 VVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFG 139
V +Y I+I++ C A ++A F EM + C P+ + L++ K+L +A F
Sbjct: 487 VYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFH 546
Query: 140 QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG----------------IGP 183
+ P A TY+A++ C + I A + ++ I P
Sbjct: 547 RMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISP 606
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY +++ L KA + +A+ + M G EP Y+ +V FC ++D A +
Sbjct: 607 NVVTYGALVNGLCKAQKVSDAHDLLDAM-LAAGCEPNQIVYDALVDGFCKVGEIDSAQEV 665
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
+ M G LP +H Y++LI+ + + +LD A K +ML P ++ + L
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCK 725
Query: 304 EGMEETAVVLAQKIDKLRKTPLV 326
G E A+ L ++K +P V
Sbjct: 726 TGETEKALNLLSLMEKKGCSPNV 748
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 139/319 (43%), Gaps = 35/319 (10%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ L+D CK ++ AQEVF +M K + P + +YT L++ + L +V +M
Sbjct: 646 YDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 705
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D P+VV+Y M++ C ++A+ L ME C P+ + LI+GLG ++
Sbjct: 706 KDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVD 765
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYC------------------------------- 161
L+ F Q K +G P TY ++ C
Sbjct: 766 AGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTV 825
Query: 162 --WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
+S R + +++EM P Y +++ KAGR E A + K M +
Sbjct: 826 QGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLN 885
Query: 220 TVS--TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACK 277
S + +++ C ++QV+ A+ ++ EM+ RG++P + + L+ L +K ++A +
Sbjct: 886 MASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQ 945
Query: 278 YFQEMLDIGIRPPGQLFSN 296
+ G+ G F +
Sbjct: 946 LCYGICQEGVNWEGNKFCD 964
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 150/364 (41%), Gaps = 53/364 (14%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKM----------------KKRRFDPDIKSYTILLEGWG 56
++ LID LCK+ +++A EV+ K+ P++ +Y L+ G
Sbjct: 560 YSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLC 619
Query: 57 QQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+ + + +++ M G EP+ + Y +++ C D A E+F M PS H
Sbjct: 620 KAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVH 679
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ +LI+ + + RL A++ Q K P TY A+V C + A ++ M
Sbjct: 680 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLM 739
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC---- 232
K G PN TY ++ L KAG+ + +F +M K G P TY I++ C
Sbjct: 740 EKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTK-GCAPNYVTYRILINHCCAAGL 798
Query: 233 -----------------------------YNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
++ + ++ + +EM++ P+ +Y LI
Sbjct: 799 LDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLI 858
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIR---PPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+S +L+ A + +EM+++ + ++L QAL E AV L ++ +
Sbjct: 859 DSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRR 918
Query: 321 RKTP 324
P
Sbjct: 919 GIVP 922
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 136/347 (39%), Gaps = 57/347 (16%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPD---IKSYTILL--EG- 54
+ FG + +N L+ L + VE A V +M F D + S+ L EG
Sbjct: 195 LKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGR 254
Query: 55 WGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPS 114
WG +LL E +D F+ D V MI+ A ++EA+ M + P+
Sbjct: 255 WGDALDLL-------ERED--FKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPN 305
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMD 174
+ TL+ G +K+L + G P +N++V YC + AY++ +
Sbjct: 306 VVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFN 365
Query: 175 EMRKCGIGPNTRTYDIVLHH---------------------------------------- 194
M CG P Y+I +
Sbjct: 366 RMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFAR 425
Query: 195 -LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L G+ E+A+ + K M RK G P STY V+ C +VD A ++ EMK GV
Sbjct: 426 CLCGVGKFEKAFQIVKEMMRK-GFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVN 484
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
P ++ Y+ LI+S C ++ A +F EM G P ++ L A
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHA 531
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 32/197 (16%)
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EAL+ G+ K G+ P A TYNA+V + ++ A+R+ EM G + T
Sbjct: 186 GEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSF 245
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTE-------------------------------PT 220
L K GR +A + +R K T P
Sbjct: 246 AQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPN 305
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V TY ++ F Q+ RI + M G P ++++L+++ C+ + A K F
Sbjct: 306 VVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFN 365
Query: 281 EMLDIGIRPPGQLFSNL 297
M G PPG + N+
Sbjct: 366 RMNTCGC-PPGYVVYNI 381
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 157/312 (50%), Gaps = 3/312 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ + LI LC + V++A E+ +M + +P++ Y+ LL+G+ +
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGR 198
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++V+ EM G EPDVV Y +I++ C + +A ++ +M +P+ +
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RK 178
LIN + E + EA+ ++G +A TYN ++ + +++A +++EM +
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGE 318
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ PN T++ V+H L K GR +A+ V + M + G + T+ +++ +V
Sbjct: 319 TMVEPNVVTFNSVIHGLCKTGRMRQAFQV-RDMMAENGCACNLVTFNLLIGGLLRVHKVK 377
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM + DEM + G+ P YS LIN C ++D A +M GI P + L
Sbjct: 378 KAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLL 437
Query: 299 QALRDEGMEETA 310
AL ++GM E A
Sbjct: 438 AALCEQGMMEQA 449
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 108/224 (48%), Gaps = 3/224 (1%)
Query: 79 DVVSYGIMINAHC-SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQF 137
D VSY ++ A C D A+ L R M A +P+ + TL+ L +E+R +A+
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVM-AHETRPTAVSYTTLMRALCAERRTGQAVGL 135
Query: 138 FGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ G P+ TY ++ C + ++ A ++ EM + GI PN Y +L K
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195
Query: 198 AGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMH 257
AGR E VF+ MS + G EP V Y ++ C +V A ++ D+M RG+ P +
Sbjct: 196 AGRWECVSKVFEEMSGR-GIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254
Query: 258 MYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
Y+ LINS+C E + +A ML+ G+ ++ L L
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL 298
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 149/354 (42%), Gaps = 39/354 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ + LID+LC+ V++A +V DKM +R +P++ +Y +L+ ++ +
Sbjct: 209 MSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGS 268
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIF 118
+ + M + G D V+Y +I DEA+ L EM T +P+ F
Sbjct: 269 VKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTF 328
Query: 119 CTLINGLGSEKRLSEALQ-----------------------------------FFGQSKK 143
++I+GL R+ +A Q +
Sbjct: 329 NSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMAS 388
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
G EP++ TY+ ++ +C +++ A ++ +MR+ GI P Y +L L + G E+
Sbjct: 389 SGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQ 448
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A + F M + + V Y ++ C A M G++P YS LI
Sbjct: 449 ARNFFDEMHKN--CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLI 506
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
N + L A + ++M G P +F +L + +G E + L +++
Sbjct: 507 NMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 3/278 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L FN LI L + V++A E+ D+M +PD +Y+IL+ G+ +
Sbjct: 351 MAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQ 410
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + +M+ DG EP++V Y ++ A C ++A F EM NCK + T
Sbjct: 411 VDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYST 469
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + A +F G P++ TY+ ++ + S + A R++ +M G
Sbjct: 470 MIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASG 529
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P+ +D ++ G TE+ + + M+ K + I + N +
Sbjct: 530 FVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALL 589
Query: 241 MRI--WDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
+ +D ++G + H + +++ LC++ + AC
Sbjct: 590 QSVPGFDTEVSKGAVISSHELTNMLHKLCNKVEPAVAC 627
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T++ L + +A F + P A +Y ++ A C R A ++ +M+
Sbjct: 83 TVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQAS 142
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P+ TY ++ L A ++A + + M + G EP V Y +++ +C + +
Sbjct: 143 GVRPDVVTYGTLIRGLCDAADVDKAVELLREMC-ESGIEPNVVVYSCLLQGYCKAGRWEC 201
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
++++EM RG+ P + MY+ LI+SLC E K+ A + +M++ G+ P ++ L
Sbjct: 202 VSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLIN 261
Query: 300 ALRDEGMEETAVVL 313
++ EG + A+ L
Sbjct: 262 SMCKEGSVKEAMSL 275
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 4/172 (2%)
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+A +YN V+ A C DA + + P +Y ++ L RT +A +
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+ M + G P V TY ++R C A VD A+ + EM G+ P + +YS L+ C
Sbjct: 137 RDM-QASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
+ + K F+EM GI P +++ L +L EG + A Q +DK+
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKA---TQVMDKM 244
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
VE A V ++M R PD SYT+ +E +V+ M + G +PD+ +YGI
Sbjct: 262 VEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGI 321
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
+I+ C A + R M+ KP+ +I+ +++G RL EAL+ + + K G
Sbjct: 322 IIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDG 381
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEM--RKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P TYN V+ A C ++++A ++ EM RK + P+ TY +++H L K G E
Sbjct: 382 ILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEER 441
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A+ + M G P TY +++ +V AM + +EM G+ P H Y TL+
Sbjct: 442 AFDLLAEMIDN-GVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 500
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRP 289
LC D +D A QEM+ G P
Sbjct: 501 QILCRSD-VDAAWDLLQEMMRNGHTP 525
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 155/307 (50%), Gaps = 9/307 (2%)
Query: 9 ELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
E PD + ++D L K+ + + E ++KM + +P + +YT+L++G + +
Sbjct: 102 EAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERAC 161
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+V+ EM G +PD+++Y +I+ A R DEA +L M A P+ + +++ GL
Sbjct: 162 DVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGL 221
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+ EA++ + ++R P TY+ +V Y ++ +A+ +M+EM P+T
Sbjct: 222 CKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDT 281
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
+Y + + L GR EEA VF+ M K G +P + TY I++ FC + A +
Sbjct: 282 ISYTMFIEALYSIGRREEAEKVFETMVEK-GCKPDMHTYGIIIDNFCKEGSMAAATHVLR 340
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL---- 301
M V P ++Y+ +++ +L++A + +Q +L GI P ++ + AL
Sbjct: 341 LMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLK 400
Query: 302 -RDEGME 307
DE +E
Sbjct: 401 KMDEALE 407
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 1/290 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++ LCK ++ A + +M++RR P + +Y+ ++ G+ + V EM
Sbjct: 214 YTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMA 273
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
D PD +SY + I A S R +EA ++F M CKP H + +I+ E ++
Sbjct: 274 DRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMA 333
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A K +P Y ++ + S R+ +A + + K GI P+T TY+ V+
Sbjct: 334 AATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVI 393
Query: 193 HHLIKAGRTEEAYSVFKRMS-RKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K + +EA + + M RK EP++ TY +++ + A + EM G
Sbjct: 394 NALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNG 453
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
V+P Y++LI +L K+ A + +EML GI P + L Q L
Sbjct: 454 VIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQIL 503
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 152/347 (43%), Gaps = 38/347 (10%)
Query: 10 LPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
L + L+D LCK+ VERA +VF++M ++ PDI +Y+ L++G + + ++
Sbjct: 141 LLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVD 200
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT-------------------- 109
M G P V+Y ++ C R EAV+ +EM
Sbjct: 201 LMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMG 260
Query: 110 ---------------NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
+C P + I L S R EA + F ++G +P+ TY
Sbjct: 261 KVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYG 320
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ +C + A ++ M K + PN Y +++ +K+ R EEA +++R+ K
Sbjct: 321 IIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRI-LK 379
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG--VLPVMHMYSTLINSLCHEDKL 272
G P+ TY V+ C ++D A+ + EM+ R + P + YS +I+ L
Sbjct: 380 DGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGME 439
Query: 273 DDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDK 319
+ A EM+D G+ P +++L Q L G A+ L +++ K
Sbjct: 440 ERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLK 486
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 4/225 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G K ++ + +ID CK + A V M K P+ YT++++G+ + L
Sbjct: 311 GCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEA 370
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME--ATNCKPSPHIFCTLI 122
E+Y+ + DG P V+Y +INA C K+ DEA+EL REM+ +PS + +I
Sbjct: 371 LELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMII 430
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+GLG A + G P+ TY +++ + +++ A +++EM K GI
Sbjct: 431 HGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIF 490
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
P+ TY ++ L ++ + A+ + + M R G P T++ V
Sbjct: 491 PDDHTYGTLVQILCRSD-VDAAWDLLQEMMRN-GHTPNEFTFKAV 533
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 141/325 (43%), Gaps = 43/325 (13%)
Query: 42 DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCS--------- 92
+P++ S+ ILL G+ + + +N + REMK G + ++G++++A C+
Sbjct: 26 EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVS 85
Query: 93 ---------------------------------AKRYDEAVELFREMEATNCKPSPHIFC 119
A YD +E + +M A+ C+P+ +
Sbjct: 86 YFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYT 145
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
L++GL ++ A F + ++G +P+ Y++++ + R+++A +++D M
Sbjct: 146 VLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIAR 205
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P Y ++ L K GR +EA + M R+ P V TY +V + +V+
Sbjct: 206 GPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR-LRPRVDTYSFIVTGYIGMGKVEE 264
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A + +EM R P Y+ I +L + ++A K F+ M++ G +P + +
Sbjct: 265 AFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIID 324
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTP 324
EG A + + +DK P
Sbjct: 325 NFCKEGSMAAATHVLRLMDKAAVKP 349
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK +K + ++D KS +E A E++ ++ K P +Y ++ + K
Sbjct: 342 MDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKK 401
Query: 61 LLSMNEVYREM--KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
+ E+ REM + + EP +V+Y ++I+ + A +L EM P +
Sbjct: 402 MDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTY 461
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI L ++S A++ + K G P+ TY +V C S ++ A+ ++ EM +
Sbjct: 462 TSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMR 520
Query: 179 CGIGPNTRTYDIV 191
G PN T+ V
Sbjct: 521 NGHTPNEFTFKAV 533
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 29/251 (11%)
Query: 77 EPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQ 136
EP+V S+ I++ + ++ L REM+A + +++ L + + L +A+
Sbjct: 26 EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVS 85
Query: 137 FFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLI 196
+F R +A R+ + + P++ TY ++ L
Sbjct: 86 YFNS------------------------RTEEACRLFEAIE----APDSVTYTAIVDGLF 117
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
KAG + +++M EPT+ TY ++V C +V+ A +++EM +G P +
Sbjct: 118 KAGNYDAGLEYYEKMVASK-CEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDI 176
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK 316
YS+LI+ L ++D+A K M+ G P ++++ L G + AV Q+
Sbjct: 177 IAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQE 236
Query: 317 IDKLRKTPLVD 327
+ + R P VD
Sbjct: 237 MRRRRLRPRVD 247
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L L++ G+ +A F+ +EP VS++ I++R F ++ + EMKAR
Sbjct: 3 LLLALVRGGQLSDALGFFQ----SSISEPNVSSFNILLRGFAARDDFEVVNALLREMKAR 58
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
G+ + ++++LC LD A YF
Sbjct: 59 GITSNGATHGVILSALCARRDLDKAVSYFN 88
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + + LI+ LC++ ++ A++V +M RR D D +YT+L++G+ ++
Sbjct: 390 MQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGK 449
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +V+ M G P+VV+Y + + C A EL EM + + + +
Sbjct: 450 MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 509
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LINGL L +A++ G +P+ TY ++ A C S ++ A+ ++ EM G
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY+++++ +GR E + + M K P +TY +++ +C +
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK-NIHPNATTYNSLMKQYCIGNNMKST 628
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
I+ M +R V P + Y+ LI C + +A + EM++ G R +S L +
Sbjct: 629 TEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRL 688
Query: 301 L 301
L
Sbjct: 689 L 689
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 144/324 (44%), Gaps = 44/324 (13%)
Query: 6 LKQELPD-----FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
L Q LPD +N L+ LC + VE A+++FD+M PD+ +Y IL+ G+
Sbjct: 253 LFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGE 309
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL------------------ 102
L + ++ +M G EP+ Y ++ C R +A+ +
Sbjct: 310 LENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTT 369
Query: 103 -----------------FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
F EM+ + TLINGL L EA + + R
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAY 205
+ + TY +V YC ++ +A+++ + M + G+ PN TY + L K G + A
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+ MS K G E TY ++ C +D AMR +M A G+ P ++ Y+TLI++
Sbjct: 490 ELLHEMSNK-GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDA 548
Query: 266 LCHEDKLDDACKYFQEMLDIGIRP 289
LC +LD A QEMLD GI+P
Sbjct: 549 LCKSGELDRAHDLLQEMLDNGIKP 572
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+D CK + A +V + M +R P++ +YT L +G +Q ++ + NE+ EM
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMS 496
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G E + +Y +IN C A D+A+ +M+A KP + + TLI+ L L
Sbjct: 497 NKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELD 556
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + G +P TYN ++ +C S R+ ++++ M + I PN TY+ ++
Sbjct: 557 RAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLM 616
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ ++K M + EP +TY I+++ C + A +EM +G
Sbjct: 617 KQYCIGNNMKSTTEIYKGMCSR-NVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGF 675
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
YS LI L + K +A K F +M
Sbjct: 676 RLTASSYSALIRLLNKKKKFVEARKLFHDM 705
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 138/309 (44%), Gaps = 2/309 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + ++ LC V A V + M + D YT +L G+ + +L+S
Sbjct: 324 GVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSA 383
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM+ G D V+Y +IN C A EA ++ +EM A + L++G
Sbjct: 384 RRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDG 443
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+++EA Q +RG P TY A+ C + A ++ EM G+ N
Sbjct: 444 YCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELN 503
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ L KAG ++A M G +P V TY ++ C + ++D A +
Sbjct: 504 ACTYNSLINGLCKAGYLDQAMRTMADMD-AAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-KQALRD 303
EM G+ P + Y+ L+N C +++ K + ML+ I P +++L KQ
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622
Query: 304 EGMEETAVV 312
M+ T +
Sbjct: 623 NNMKSTTEI 631
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 143/308 (46%), Gaps = 2/308 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ ++ C + A+ FD+M+++ D +YT L+ G + L +V +EM
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML 426
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ D V+Y ++++ +C + EA ++ M P+ + L +GL + +
Sbjct: 427 ARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQ 486
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + +G E A TYN+++ C + ++ A R M +M G+ P+ TY ++
Sbjct: 487 AANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+G + A+ + + M G +PT+ TY +++ FC + +V+ ++ + M + +
Sbjct: 547 DALCKSGELDRAHDLLQEMLDN-GIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNI 605
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-KQALRDEGMEETAV 311
P Y++L+ C + + + ++ M + P ++ L K + M+E
Sbjct: 606 HPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQY 665
Query: 312 VLAQKIDK 319
+ I+K
Sbjct: 666 FHNEMIEK 673
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 3/228 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ +N LI+ LCK+ ++++A M PD+ +YT L++ +
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +++ +EM D+G +P +V+Y +++N C + R + +L M N P+ + +
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ + + + R EP TYN ++ +C + + +A +EM + G
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG--TEPTVSTYEI 226
+Y ++ L K + EA +F M RK G EP V + I
Sbjct: 675 FRLTASSYSALIRLLNKKKKFVEARKLFHDM-RKEGFTAEPDVYNFYI 721
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 28/261 (10%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
F D S+ +++ SA L R + PSP N + S L EA
Sbjct: 202 AFSSDPASFDLLLLCLPSAP-------LLRRVRQYGISPSPEA----CNAVLSRLPLDEA 250
Query: 135 LQFFGQSKKRGF-EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
++ F +G + +YN ++ C + R+ DA ++ DEM P+ TY I++H
Sbjct: 251 IELF-----QGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIH 302
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
G E A + M + G EP + Y VV + C +V A+ + ++M V+
Sbjct: 303 GYCALGELENAVKLLDDMVAR-GVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVI 361
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVV 312
+Y+T+++ C++ L A ++F EM G+ G ++ L L G ++E V
Sbjct: 362 LDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKV 421
Query: 313 LAQ------KIDKLRKTPLVD 327
L + +D++ T LVD
Sbjct: 422 LQEMLARRLDVDEVTYTVLVD 442
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 166/352 (47%), Gaps = 38/352 (10%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+ +++I L ++ + +A +F ++K R+ P ++Y ++ + ++E+Y EM
Sbjct: 161 ELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEM 220
Query: 72 KDDGF-EPDVVSYGIMINAHCSAKRYDEAV------------------------------ 100
++G +PD V+Y +I+A C R D A+
Sbjct: 221 SNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDN 280
Query: 101 -----ELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
LF EM C+P + LI GLG R+ EA F+ + ++ G +P+ N
Sbjct: 281 VHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNN 340
Query: 156 VVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA-GRTEEAYSVFKRMSRK 214
++ + R++D ++ +EM PN TY+ ++ L ++ R E +S F+RM +
Sbjct: 341 MINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERM-KG 399
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G P+ TY I++ FC +++ AM + +EM +G P Y +LI++L + D
Sbjct: 400 SGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
AC+ FQE+ + ++++ + + L G + A+ L ++ KL TP V
Sbjct: 460 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNV 511
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 161/356 (45%), Gaps = 37/356 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + +I K +V A +F++M+ PD+ +YT L+ G G+
Sbjct: 256 MKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGR 315
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ Y EM+ +G +PD V MIN A R D+ ++LF EM ++C P+ + T
Sbjct: 316 IDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNT 375
Query: 121 LINGL-GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I L S+ R+SE +F + K G P TY+ ++ +C + RI A +++EM +
Sbjct: 376 IIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEK 435
Query: 180 GIGP-----------------------------------NTRTYDIVLHHLIKAGRTEEA 204
G P + R Y +++ HL KAGR ++A
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDA 495
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
++F MS K G P V Y ++ +D A+ +M+ G LP ++ Y+ ++N
Sbjct: 496 INLFDEMS-KLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILN 554
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
L A + M + I+P ++ + AL GM E A L ++++ L
Sbjct: 555 GLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNAL 610
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 148/302 (49%), Gaps = 2/302 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G K + N +I+ L K+ ++ ++F++M P++ +Y +++ + K+
Sbjct: 326 MQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKS 385
Query: 61 LLS-MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
+S + + MK G P +Y I+I+ C R ++A+ L EM+ P P +C
Sbjct: 386 RVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYC 445
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI+ LG KR A + F + K+ A Y ++ + R++DA + DEM K
Sbjct: 446 SLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKL 505
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G PN Y+ ++ L +A +EA + ++M ++ G P +++Y I++
Sbjct: 506 GCTPNVYAYNALMSGLARACMLDEALTTMRKM-QEHGCLPDINSYNIILNGLAKTGGPHR 564
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
AM + MK + P Y+T++++L H ++A + +EM +G +S++ +
Sbjct: 565 AMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILE 624
Query: 300 AL 301
A+
Sbjct: 625 AI 626
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 2/308 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI CK + A + ++MK+ P K YT+++ + + N+ ++ EM+
Sbjct: 233 YSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMR 292
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
PDV +Y +I A R DEA + EM+ CKP + +IN LG RL
Sbjct: 293 YMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLD 352
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWS-MRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+ L+ F + P TYN ++ A S R+++ + + M+ GI P+ TY I+
Sbjct: 353 DGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSIL 412
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ K R E+A + + M K G P + Y ++ + D+A ++ E+K
Sbjct: 413 IDGFCKTNRIEKAMMLLEEMDEK-GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENC 471
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+Y+ +I L +LDDA F EM +G P ++ L L M + A+
Sbjct: 472 GSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEAL 531
Query: 312 VLAQKIDK 319
+K+ +
Sbjct: 532 TTMRKMQE 539
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 134/276 (48%), Gaps = 9/276 (3%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVF---DKMKKRRFDPDIKSYTILLEGW 55
++ G+ +P+ +N +I L +S+ R EVF ++MK P +Y+IL++G+
Sbjct: 359 EEMGVSHCIPNVVTYNTIIKALFESK--SRVSEVFSWFERMKGSGISPSPFTYSILIDGF 416
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
+ + + EM + GF P +Y +I+A AKRYD A ELF+E++ S
Sbjct: 417 CKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSA 476
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
++ +I LG RL +A+ F + K G P YNA++ + +++A M +
Sbjct: 477 RVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRK 536
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
M++ G P+ +Y+I+L+ L K G A + M + +P +Y V+ +
Sbjct: 537 MQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNM-KNSTIKPDAVSYNTVLSALSHAG 595
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
+ A + EM A G + YS+++ ++ D+
Sbjct: 596 MFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 111/236 (47%), Gaps = 3/236 (1%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKR 130
K ++ D +Y +I+ ++Y E ++ +EM + C +P +I LG+ K
Sbjct: 115 KKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKM 174
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYD 189
+ +A+ F Q K R +P A YN+++ + + + +EM G P+T TY
Sbjct: 175 IGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYS 234
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ K GR + A + M ++ G +PT Y +++ +F V A+ +++EM+
Sbjct: 235 ALISAFCKLGRQDSAIRLLNEM-KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRY 293
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
P + Y+ LI L ++D+A ++ EM G +P + +N+ L G
Sbjct: 294 MYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAG 349
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ G + LID L K++ + A E+F ++K+ + Y ++++ G+
Sbjct: 432 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 491
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM G P+V +Y +++ A DEA+ R+M+ C P + +
Sbjct: 492 LDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNI 551
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL A++ K +P+A +YN V+ A + +A +M EM G
Sbjct: 552 ILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALG 611
Query: 181 IGPNTRTYDIVLHHLIK 197
+ TY +L + K
Sbjct: 612 FEYDLITYSSILEAIGK 628
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 57/250 (22%)
Query: 135 LQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM----------------- 176
+QFF +KKR ++ + TY A++ + + ++M+ EM
Sbjct: 107 MQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVI 166
Query: 177 ---------------------RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
RKC P + Y+ ++ LI G+ E+ + ++ MS +
Sbjct: 167 RMLGNAKMIGKAITIFYQIKARKC--QPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEG 224
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
+P TY ++ FC + D A+R+ +EMK G+ P +Y+ +I+ D + A
Sbjct: 225 HCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGA 284
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQAL----------------RDEGMEETAVVLAQKIDK 319
F+EM + RP ++ L + L + EG + VV+ I+
Sbjct: 285 LSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINF 344
Query: 320 LRKTPLVDRG 329
L K +D G
Sbjct: 345 LGKAGRLDDG 354
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 152/307 (49%), Gaps = 1/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +I L S A+ +F+++++ P ++Y LL+G+ + L
Sbjct: 299 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 358
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM+ G PD +Y ++I+A+ +A R++ A + +EMEA + +P+ +F L+ G
Sbjct: 359 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 418
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ Q + K G +P+ YN V+ + ++ A D M GI P+
Sbjct: 419 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 478
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ K GR A +F+ M R+ G P +TY I++ + + D R+
Sbjct: 479 RVTWNTLIDCHCKHGRHIVAEEMFEAMERR-GCLPCATTYNIMINSYGDQERWDDMKRLL 537
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+MK++G+LP + ++TL++ + +DA + +EM +G++P +++ L A
Sbjct: 538 GKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 597
Query: 305 GMEETAV 311
G+ E AV
Sbjct: 598 GLSEQAV 604
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 1/290 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+RL+ ++ +V +MK PD + Y ++++ +G+ L + M
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G EPD V++ +I+ HC R+ A E+F ME C P + +IN G ++R
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWD 531
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + G+ K +G P T+ +V Y S R NDA ++EM+ G+ P++ Y+ ++
Sbjct: 532 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + G +E+A + F+ M+ G +P++ ++ F + + A + MK GV
Sbjct: 592 NAYAQRGLSEQAVNAFRVMT-SDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 650
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
P + Y+TL+ +L DK ++EM+ G +P + S L+ ALR
Sbjct: 651 KPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALR 700
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 3/279 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS--MNEVYRE 70
+N LI ++ +E+A + KM++ + D +Y+++++ + + S + +Y+E
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
++ D E DV +I + +A++L +AT ++I+ L R
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 319
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
EA F + ++ G +P YNA++ Y + + DA M+ EM K G+ P+ TY +
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 379
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ + AGR E A V K M +P + ++ F + ++ EMK+
Sbjct: 380 LIDAYVNAGRWESARIVLKEM-EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 438
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
GV P Y+ +I++ + LD A F ML GI P
Sbjct: 439 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP 477
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 134/285 (47%), Gaps = 8/285 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI L +S E+ E F +K+ P +Y L+ + ++ + +M+
Sbjct: 170 YSILIHALGRS---EKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMR 224
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEA--VELFREMEATNCKPSPHIFCTLINGLGSEKR 130
DG++ D V+Y ++I + + + D + L++E+E + + +I G
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
S+ALQ G ++ G + T +++ A S R +A + +E+R+ GI P TR Y+
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L +K G ++A S+ M ++ G P TY +++ + + + A + EM+A
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKR-GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 403
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
V P ++S L+ + + +EM IG++P Q ++
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 448
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 5 GLKQELPDFNRLIDTLCK-SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G++ + +N LID CK RH+ A+E+F+ M++R P +Y I++ +G Q+
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIV-AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 532
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
M + +MK G P+VV++ +++ + + R+++A+E EM++ KPS ++ LIN
Sbjct: 533 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+A+ F G +P N+++ A+ R +A+ ++ M++ G+ P
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ TY ++ LI+ + ++ V++ M
Sbjct: 653 DVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 111 CKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAY 170
C ++ LI+ LG ++L EA F S+K+ P TYNA++GA + I A
Sbjct: 163 CFSYELLYSILIHALGRSEKLYEA---FLLSQKQTLTP--LTYNALIGACARNNDIEKAL 217
Query: 171 RMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA--YSVFKRMSRKPGTEPTVSTYEIVV 228
++ +MR+ G + Y +V+ L ++ + + ++K + R E V ++
Sbjct: 218 NLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDK-LELDVQLVNDII 276
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
F + A+++ +A G+ ++I++L + +A F+E+ GI+
Sbjct: 277 MGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIK 336
Query: 289 PPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
P + ++ L + G + A + +++K +P
Sbjct: 337 PRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP 372
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 152/307 (49%), Gaps = 1/307 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +I L S A+ +F+++++ P ++Y LL+G+ + L
Sbjct: 270 GLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDA 329
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM+ G PD +Y ++I+A+ +A R++ A + +EMEA + +P+ +F L+ G
Sbjct: 330 ESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAG 389
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ Q + K G +P+ YN V+ + ++ A D M GI P+
Sbjct: 390 FRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD 449
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
T++ ++ K GR A +F+ M R+ G P +TY I++ + + D R+
Sbjct: 450 RVTWNTLIDCHCKHGRHIVAEEMFEAMERR-GCLPCATTYNIMINSYGDQERWDDMKRLL 508
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+MK++G+LP + ++TL++ + +DA + +EM +G++P +++ L A
Sbjct: 509 GKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 568
Query: 305 GMEETAV 311
G+ E AV
Sbjct: 569 GLSEQAV 575
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 1/290 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
F+RL+ ++ +V +MK PD + Y ++++ +G+ L + M
Sbjct: 383 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 442
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G EPD V++ +I+ HC R+ A E+F ME C P + +IN G ++R
Sbjct: 443 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWD 502
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+ + G+ K +G P T+ +V Y S R NDA ++EM+ G+ P++ Y+ ++
Sbjct: 503 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 562
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+ + G +E+A + F+ M+ G +P++ ++ F + + A + MK GV
Sbjct: 563 NAYAQRGLSEQAVNAFRVMTSD-GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 621
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
P + Y+TL+ +L DK ++EM+ G +P + S L+ ALR
Sbjct: 622 KPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALR 671
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 129/279 (46%), Gaps = 3/279 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS--MNEVYRE 70
+N LI ++ +E+A + KM++ + D +Y+++++ + + S + +Y+E
Sbjct: 171 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 230
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
++ D E DV +I + +A++L +AT ++I+ L R
Sbjct: 231 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 290
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
EA F + ++ G +P YNA++ Y + + DA M+ EM K G+ P+ TY +
Sbjct: 291 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 350
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
++ + AGR E A V K M +P + ++ F + ++ EMK+
Sbjct: 351 LIDAYVNAGRWESARIVLKEM-EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI 409
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
GV P Y+ +I++ + LD A F ML GI P
Sbjct: 410 GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEP 448
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 110/208 (52%), Gaps = 2/208 (0%)
Query: 5 GLKQELPDFNRLIDTLCK-SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G++ + +N LID CK RH+ A+E+F+ M++R P +Y I++ +G Q+
Sbjct: 445 GIEPDRVTWNTLIDCHCKHGRHIV-AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 503
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
M + +MK G P+VV++ +++ + + R+++A+E EM++ KPS ++ LIN
Sbjct: 504 MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 563
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
+A+ F G +P N+++ A+ R +A+ ++ M++ G+ P
Sbjct: 564 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 623
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
+ TY ++ LI+ + ++ V++ M
Sbjct: 624 DVVTYTTLMKALIRVDKFQKVPVVYEEM 651
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 134/285 (47%), Gaps = 8/285 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LI L +S E+ E F +K+ P +Y L+ + ++ + +M+
Sbjct: 141 YSILIHALGRS---EKLYEAFLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMR 195
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEA--VELFREMEATNCKPSPHIFCTLINGLGSEKR 130
DG++ D V+Y ++I + + + D + L++E+E + + +I G
Sbjct: 196 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 255
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
S+ALQ G ++ G + T +++ A S R +A + +E+R+ GI P TR Y+
Sbjct: 256 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 315
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L +K G ++A S+ M ++ G P TY +++ + + + A + EM+A
Sbjct: 316 LLKGYVKTGPLKDAESMVSEMEKR-GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG 374
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
V P ++S L+ + + +EM IG++P Q ++
Sbjct: 375 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYN 419
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
++ LI+ LG ++L EA F S+K+ P TYNA++GA + I A ++ +M
Sbjct: 140 LYSILIHALGRSEKLYEA---FLLSQKQTLTPL--TYNALIGACARNNDIEKALNLIAKM 194
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEA--YSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
R+ G + Y +V+ L ++ + + ++K + R E V ++ F +
Sbjct: 195 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDK-LELDVQLVNDIIMGFAKS 253
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
A+++ +A G+ ++I++L + +A F+E+ GI+P + +
Sbjct: 254 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 313
Query: 295 SNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ L + G + A + +++K +P
Sbjct: 314 NALLKGYVKTGPLKDAESMVSEMEKRGVSP 343
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 1/292 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ +I+ C++ +V RA EVFD+ +P+ +Y L+ G+ + + + + +M+
Sbjct: 251 YSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQ 310
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G + + + MI+ +C D+A+E+ ME + + + TL GL R+
Sbjct: 311 VRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 370
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA ++G P +Y ++ +C + +A R+ EM G P+ TY++++
Sbjct: 371 EAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMM 430
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
IK G EA FK K G P + +Y +V C N +VD+A+R+++EMK RG
Sbjct: 431 DGYIKKGSIREAER-FKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGS 489
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
P + Y+ LI+ L E + ++A + + ML G+ P L+S L +L +
Sbjct: 490 KPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTD 541
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 158/313 (50%), Gaps = 1/313 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ + + L+D L +R + + + VF++MK + D+ Y+ ++ + + N
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +EV+ E +G EP+ +YG +IN C + + A L +M+ + +F T
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + + +AL+ +K G E + TYN + + R+++A ++ M + G
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN +Y ++ G EA +F+ M+ G EP++ TY +++ + + A
Sbjct: 384 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN-GAEPSLVTYNVMMDGYIKKGSIREA 442
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R +EM+ +G++P ++ Y+ L++ C K+D A + F+EM G +P ++ L
Sbjct: 443 ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 502
Query: 301 LRDEGMEETAVVL 313
L EG E A L
Sbjct: 503 LAKEGRSEEAFQL 515
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 47 SYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM 106
S +++++G+ + + ++ EM G + + + Y +++A+ K D E+ + M
Sbjct: 145 SASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVM 204
Query: 107 EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRI 166
E +P+ + L++GL + + +++ F + K + + Y++V+ AYC + +
Sbjct: 205 ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNV 264
Query: 167 NDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMS-RKPGTEPTVSTYE 225
A + DE GI PN TY +++ K G+ E A + M R G V +
Sbjct: 265 RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIV--FN 322
Query: 226 IVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDI 285
++ +C VD A+ I M+ G+ ++ Y+TL L +++D+A + M++
Sbjct: 323 TMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382
Query: 286 GIRPPGQLFSNLKQALRDEG 305
G+RP ++ L +EG
Sbjct: 383 GVRPNHVSYTTLISIHCNEG 402
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ + LI C + A+ +F +M +P + +Y ++++G+ ++ ++
Sbjct: 383 GVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREA 442
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM+ G PD+ SY +++ HC + D A+ LF EM+ KP+ + LI+G
Sbjct: 443 ERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISG 502
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGA 159
L E R EA Q + G P+ Y+A+VG+
Sbjct: 503 LAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGS 537
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 96/195 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K G++ ++ +N L L ++ ++ A+ + M ++ P+ SYT L+ + +
Sbjct: 344 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ ++REM +G EP +V+Y +M++ + EA EME P + +
Sbjct: 404 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 463
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++G ++ AL+ F + K+RG +P Y A++ R +A+++ D M G
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523
Query: 181 IGPNTRTYDIVLHHL 195
+ P+ Y ++ L
Sbjct: 524 LTPDDALYSALVGSL 538
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 11/249 (4%)
Query: 78 PDVV---SYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK---RL 131
PD V S ++++ +C + R A +L EM K + + +L++ EK R+
Sbjct: 138 PDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRV 197
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
+E L+ + G EP TY +V + I + +EM+ + + Y V
Sbjct: 198 AEMLKVM---ENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSV 254
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
++ +AG A VF G EP TY ++ FC Q++ A + +M+ RG
Sbjct: 255 INAYCRAGNVRRASEVFDECVGN-GIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETA 310
V +++T+I+ C ++ +D A + M +GI ++ L LR M+E
Sbjct: 314 VGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAK 373
Query: 311 VVLAQKIDK 319
+L I+K
Sbjct: 374 NLLRIMIEK 382
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L +N ++D K + A+ ++M+K+ PDI SY L+ G +
Sbjct: 418 GAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVA 477
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EMK G +P++V+Y +I+ R +EA +L+ M P ++ L+
Sbjct: 478 LRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGS 537
Query: 125 LGSEKR 130
L ++K+
Sbjct: 538 LHTDKK 543
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 148/301 (49%), Gaps = 8/301 (2%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTI--LLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSY 83
+ +E+FD++ R +KS + LLEG L E M+ GF+P+VVSY
Sbjct: 157 IATNRELFDELTLSRDRLSVKSSIVFDLLEG-----KLKKAREFIGFMEGLGFKPNVVSY 211
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
+I+ + S + A + M +P + + +LI+G+ E RL EA F + +
Sbjct: 212 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 271
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
G P A TYN ++ YC + A+ DEM K GI P+ TY++++H L GR E
Sbjct: 272 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 331
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A + K M RK G P TY I++ + A + +EM ++G+ P Y++LI
Sbjct: 332 ADDMIKEM-RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLI 390
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKT 323
L +++ +A F+++LD G+ P +F+ + G E A +L +++D+
Sbjct: 391 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVP 450
Query: 324 P 324
P
Sbjct: 451 P 451
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 144/301 (47%), Gaps = 1/301 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL +N LID C +ERA D+M K+ P + +Y +L+ +
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGR 328
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ +EM+ G PD ++Y I+IN + A +L EM + +P+ + +
Sbjct: 329 MGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTS 388
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L R+ EA F + +G P+ +NA++ +C + + A+ ++ EM +
Sbjct: 389 LIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKS 448
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T++ ++ + G+ EEA + M + G +P +Y ++ + + A
Sbjct: 449 VPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR-GIKPDHISYNTLISGYGRRGDIKDA 507
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ DEM + G P + Y+ LI LC + D A + +EM++ GI P + +L +
Sbjct: 508 FXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 567
Query: 301 L 301
+
Sbjct: 568 M 568
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 149/309 (48%), Gaps = 15/309 (4%)
Query: 19 TLCKSRHVERAQEVFD----KMKKRR----------FDPDIKSYTILLEGWGQQKNLLSM 64
TL + R ++ VFD K+KK R F P++ SY ++ G+ + N+
Sbjct: 168 TLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGA 227
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M+ G EPD +YG +I+ C R +EA LF +M P+ + TLI+G
Sbjct: 228 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG 287
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
++ L A + + K+G P TYN +V A R+ +A M+ EMRK GI P+
Sbjct: 288 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 347
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+I+++ + G + A+ + M K G EPT TY ++ + ++ A ++
Sbjct: 348 AITYNILINGYSRCGNAKRAFDLHNEMLSK-GIEPTHVTYTSLIYVLSRRNRMKEADDLF 406
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDE 304
+++ +GV P + M++ +I+ C ++ A +EM + P F+ L Q E
Sbjct: 407 EKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 466
Query: 305 GMEETAVVL 313
G E A +L
Sbjct: 467 GKVEEARML 475
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 139/289 (48%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G K + +N +I ++E A+ + D M+ + +PD +Y L+ G ++
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 258
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + ++ +M + G P+ V+Y +I+ +C+ + A EM PS +
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L++ L E R+ EA + +K+G P+A TYN ++ Y A+ + +EM G
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I P TY +++ L + R +EA +F+++ + G P V + ++ C N V+ A
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ-GVSPDVIMFNAMIDGHCANGNVERA 437
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ EM + V P ++TL+ C E K+++A EM GI+P
Sbjct: 438 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ + + FN L+ C+ VE A+ + D+MK R PD SY L+ G+G++ +
Sbjct: 444 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGD 503
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V EM GF P +++Y +I C + D A EL +EM P + +
Sbjct: 504 IKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 563
Query: 121 LINGLGSEKRLSE 133
LI G+G+ L E
Sbjct: 564 LIEGMGNVDTLVE 576
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G L +N LI LCK++ + A+E+ +M + PD +Y L+EG G
Sbjct: 514 MLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDT 573
Query: 61 LLSMN 65
L+ N
Sbjct: 574 LVEDN 578
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G KQ + +N LID L S +E + +MK F P ++ + ++++
Sbjct: 483 MVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRRED 542
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ REM+ G EP + Y +++ C KR EA EM P +
Sbjct: 543 VTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSA 602
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I+G K + +AL+ F RG+ P+ YN ++ +C R+++A+ ++DEM G
Sbjct: 603 AIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKG 662
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY++++ K G ++A+ RM K EP V TY ++ C + D A
Sbjct: 663 LVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKE-REPNVITYTTLIDGLCNAGRPDDA 721
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ +W+EM+ +G P + LI+ LC D A YF+EM
Sbjct: 722 IHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREM 763
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 144/338 (42%), Gaps = 50/338 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTIL--------- 51
M K G ++ ++ LI LC + +E+A + +MK+ DPDI+ + L
Sbjct: 329 MQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVD 388
Query: 52 --------LEGWGQQKNLLSMNEVYREMKD--------------------DGFE------ 77
LE + LL N V + + D FE
Sbjct: 389 IYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFM 448
Query: 78 ------PDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
PD S+ I+I+ C+ + D A+ LFR+M CK + ++ LI+ L + RL
Sbjct: 449 VKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRL 508
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
E + K GF P T+N++ G C + A M+ EMR G P + Y ++
Sbjct: 509 EECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLL 568
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ L K R+ EA + M R+ G P + Y + F VD A+ I+ ++ ARG
Sbjct: 569 VKQLCKRKRSAEACNFLAEMVRE-GFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARG 627
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P + Y+TLIN C ++ +A EM+ G+ P
Sbjct: 628 YCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVP 665
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 150/329 (45%), Gaps = 7/329 (2%)
Query: 1 MDKFGLKQEL--PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW 55
++KF + +E+ PD F+ +ID LC + ++ A +F M + ++ Y L++
Sbjct: 443 VNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKL 502
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
L + +EMK GF P ++ + C + A+++ REM +P
Sbjct: 503 SNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWI 562
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ L+ L KR +EA F + + GF P+ Y+A + + ++ A + +
Sbjct: 563 KHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRD 622
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
+ G P+ Y+ +++ K R EA+ + M K G P+V TY +++ +C N
Sbjct: 623 ICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAK-GLVPSVVTYNLLIDGWCKNG 681
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+D A M + P + Y+TLI+ LC+ + DDA + EM G P F
Sbjct: 682 DIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFI 741
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L L G + A++ +++ + R+TP
Sbjct: 742 ALIHGLCKCGWPDAALLYFREMGE-RETP 769
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ LCK + A +M + F PDI +Y+ ++G+ + K + E++R++
Sbjct: 565 YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDIC 624
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G+ PDVV+Y +IN C KR EA ++ EM A PS + LI+G +
Sbjct: 625 ARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDID 684
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + EP TY ++ C + R +DA + +EMR G PN ++ ++
Sbjct: 685 QAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALI 744
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K G + A F+ M + P Y ++ F N +A I EM A+G
Sbjct: 745 HGLCKCGWPDAALLYFREMGERE--TPDTIVYVALITSFISNKNPTLAFEILKEMVAKGK 802
Query: 253 LP 254
P
Sbjct: 803 FP 804
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 2/276 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N + LC+ V A ++ +M+ +P IK YT+L++ ++K EM
Sbjct: 531 NSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVR 590
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+GF PD+V+Y I+ K D+A+E+FR++ A P + TLING KR+SE
Sbjct: 591 EGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSE 650
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + +G P TYN ++ +C + I+ A+ + M PN TY ++
Sbjct: 651 AHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLID 710
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L AGR ++A ++ M R G P ++ ++ C D A+ + EM R
Sbjct: 711 GLCNAGRPDDAIHLWNEM-RGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERET- 768
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P +Y LI S A + +EM+ G P
Sbjct: 769 PDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFP 804
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 152/357 (42%), Gaps = 83/357 (23%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRF-DPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
I L + VE A +FD++K R P+ S+ LLE + ++ + +EM D
Sbjct: 169 FIRCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDS 228
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFRE----------------------------- 105
G+EPD + ++ A+C+++++D+A+ +F E
Sbjct: 229 GWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKCGEVDKAF 288
Query: 106 -----MEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
ME + + FC LI+G + R+ +ALQ F + +K GF P+ Y+A++G
Sbjct: 289 ELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGL 348
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRT--------------------------------- 187
C I A ++ EM++ GI P+ +
Sbjct: 349 CAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLL 408
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE---------------PTVSTYEIVVRMFC 232
Y+ VL+ L+ ++AY + + M+ T+ P +++ IV+ C
Sbjct: 409 YNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLC 468
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++D+A+ ++ +M G + +Y+ LI+ L + ++L++ +EM G RP
Sbjct: 469 NTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRP 525
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 140/309 (45%), Gaps = 27/309 (8%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ F LI + V++A ++F KM+K F PD+ Y L+ G +K
Sbjct: 294 MEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKE 353
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFR----EMEATNCKPSPH 116
+ + EMK+ G +PD+ +I A+CS E V+++R +E + +
Sbjct: 354 IEKALHLLSEMKELGIDPDIQILSKLI-AYCS-----EEVDIYRLIEERLEDLDTEAMLL 407
Query: 117 IFCTLINGLGSEKRLSEALQFF----GQSKKRGFE------------PEAPTYNAVVGAY 160
++ +++NGL + K + +A G + FE P+ +++ V+
Sbjct: 408 LYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGL 467
Query: 161 CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPT 220
C + +++ A + +M + G N Y+ ++ L + R EE Y + K M + G PT
Sbjct: 468 CNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEM-KGSGFRPT 526
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
T+ + C V A+ + EM+ G P + Y+ L+ LC + +AC +
Sbjct: 527 QFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLA 586
Query: 281 EMLDIGIRP 289
EM+ G P
Sbjct: 587 EMVREGFLP 595
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 10/203 (4%)
Query: 123 NGLGSEKRLSEALQFFG-QSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM----R 177
N L K A +FF S + GF TYNA+ A C S +A + M
Sbjct: 100 NVLSGLKSWKIAYRFFNWASDQGGFNHNCYTYNAM--ASCLSHARQNAPLSLLSMDIVNS 157
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+C + P + I L G EEA +F ++ P ++ ++ + +
Sbjct: 158 RCAMSPGALGFFI--RCLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSI 215
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D+ EM G P + ++++ + C+ K D A F E+ G G + S L
Sbjct: 216 DLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRG-WVDGHVLSIL 274
Query: 298 KQALRDEGMEETAVVLAQKIDKL 320
G + A L ++++ L
Sbjct: 275 VLTFSKCGEVDKAFELIERMEDL 297
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 116/213 (54%), Gaps = 3/213 (1%)
Query: 2 DKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
+K L+ PD FN L+D CK R ++ + VF M K+ PD+ +Y L++G+
Sbjct: 136 NKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLV 195
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
K + + ++ M G PD+ SY I+IN C K+ D+A+ LF EM N P+ +
Sbjct: 196 KEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTY 255
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI+GL R+S ALQ Q RG P TYN+++ A + +++ A ++ + +
Sbjct: 256 NSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKD 315
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
GI P+ TY I++ L K GR ++A ++F+ +
Sbjct: 316 QGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 147/302 (48%), Gaps = 1/302 (0%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + + LI LCK A ++ ++ + + Y ++ G + K++
Sbjct: 36 LGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVND 95
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++Y EM G P+VV+Y +I+ + +A++LF ++ N KP + F L++
Sbjct: 96 AFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVD 155
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
G ++++ E F K+G P+ TYN++V Y +N A + + M + G+ P
Sbjct: 156 GFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNP 215
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ R+Y+I+++ K + ++A ++F M K P V TY ++ + ++ A+++
Sbjct: 216 DIRSYNILINGFCKIKKVDKAMNLFNEMHCK-NIIPNVVTYNSLIDGLSKSGRISYALQL 274
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
D+M RGV P + Y+++I++L ++D A + D GI+P ++ L L
Sbjct: 275 VDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCK 334
Query: 304 EG 305
G
Sbjct: 335 GG 336
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 135/270 (50%), Gaps = 1/270 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +I +CK +HV A +++ +M + P++ +Y+ L+ G+ L +++ ++
Sbjct: 80 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKII 139
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ +PD ++ I+++ C ++ E +F M P + +L++G K ++
Sbjct: 140 LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVN 199
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A F + G P+ +YN ++ +C +++ A + +EM I PN TY+ ++
Sbjct: 200 TAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLI 259
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K+GR A + +M + G P + TY ++ QVD A+ + + K +G+
Sbjct: 260 DGLSKSGRISYALQLVDQMHDR-GVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGI 318
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
P M+ Y+ LI+ LC +L DA F+++
Sbjct: 319 QPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 1/304 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
N LI LC + +A DK+ F D SY L+ G + + ++ + +
Sbjct: 10 LNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVD 69
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ + V Y +I C K ++A +L+ EM + P+ + LI+G +L
Sbjct: 70 GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLK 129
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A+ F + +P+ T+N +V +C ++ + + M K GI P+ TY+ ++
Sbjct: 130 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLV 189
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
A S+F M++ G P + +Y I++ FC +VD AM +++EM + +
Sbjct: 190 DGYRLVKEVNTAKSIFNTMAQ-GGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNI 248
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+P + Y++LI+ L ++ A + +M D G+ P ++++ AL + A+
Sbjct: 249 IPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIA 308
Query: 313 LAQK 316
L K
Sbjct: 309 LITK 312
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 112/305 (36%), Gaps = 50/305 (16%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G+ P+ ++ +I C + +A ++ A + TLI+GL A
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
L + + + A YN V+ C +NDA+ + EM GI PN TY ++
Sbjct: 62 LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121
Query: 195 LIKAGRTEEAYSVFKR----------------------------------MSRKPGTEPT 220
G+ ++A +F + M K G P
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181
Query: 221 VSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQ 280
V TY +V + +V+ A I++ M GV P + Y+ LIN C K+D A F
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241
Query: 281 EMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQK----------------IDKLRKTP 324
EM I P +++L L G A+ L + ID L KT
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301
Query: 325 LVDRG 329
VD+
Sbjct: 302 QVDKA 306
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 88/176 (50%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ ++ +N L+D + V A+ +F+ M + +PDI+SY IL+ G+ + K
Sbjct: 173 MMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKK 232
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ EM P+VV+Y +I+ + R A++L +M P+ + +
Sbjct: 233 VDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNS 292
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+I+ L ++ +A+ + K +G +P TY ++ C R+ DA + +++
Sbjct: 293 IIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 148/306 (48%), Gaps = 8/306 (2%)
Query: 26 VERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGI 85
V+ A +VF++M +P I SY ++ + ++VY MK +G PDV ++ I
Sbjct: 92 VQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTI 151
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRG 145
I + C KR A+ L M + C+ + ++CT+I+G E EA + F + + G
Sbjct: 152 RIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLG 211
Query: 146 FEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE--- 202
P T+N ++ C + + ++++++ K G+ PN T++I + L + G E
Sbjct: 212 IFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGAN 271
Query: 203 ----EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHM 258
EA + +M K G EP TY ++ + ++ A RI + K +G +P
Sbjct: 272 SKVVEAENYLHKMVNK-GLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFT 330
Query: 259 YSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
Y +LI +C + +D A F+E L G++P L++ L + L +G+ A+ L +
Sbjct: 331 YCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMS 390
Query: 319 KLRKTP 324
K +P
Sbjct: 391 KEGMSP 396
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 144/297 (48%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK + +N LI L + V +A ++ + M K PDI +Y +++ G + +
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N + G+ PD+ ++ +I+ +C + D A+ + M + P + +++NG
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNG 477
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L + + ++ F ++G P TYN ++ + C + ++ +A +++E+R G+ P+
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
++ V+ G +EAY +F+RM ++ TV+TY I++ F +DMA +++
Sbjct: 538 PVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLF 597
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM +G P + Y +I+ C ++ + + ++IG P F + L
Sbjct: 598 HEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCL 654
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 43/322 (13%)
Query: 3 KFGLKQELPDFNRLIDTLCK-------SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW 55
K G+ L FN I LC+ + V A+ KM + +PD +Y ++ G+
Sbjct: 244 KNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGY 303
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
+ + + + ++ K GF PD +Y +I C D A+ LF E KPS
Sbjct: 304 SKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSI 363
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG----------------- 158
++ TLI GL + + +ALQ K G P+ TYN V+
Sbjct: 364 VLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNA 423
Query: 159 ------------------AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGR 200
YC +++++A ++D M G+ P+ TY+ +L+ L KA +
Sbjct: 424 AIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAK 483
Query: 201 TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYS 260
E+ FK + K G P + TY I++ C +V A+ + +E++ RG++P +
Sbjct: 484 PEDVMETFKMIMEK-GCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFG 542
Query: 261 TLINSLCHEDKLDDACKYFQEM 282
T+I+ C+ LD+A + F+ M
Sbjct: 543 TVISGFCNNGDLDEAYQLFRRM 564
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 141/290 (48%), Gaps = 2/290 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ ++ +N +I+ LCK V A + + + + PDI ++ L++G+ ++
Sbjct: 389 MSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLK 448
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + M G PDV++Y ++N C A + ++ +E F+ + C P+ +
Sbjct: 449 MDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNI 508
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKC 179
LI L ++++EAL + + RG P+ ++ V+ +C + +++AY++ M ++
Sbjct: 509 LIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQY 568
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I TY+I+++ + + A +F M K G +P TY +++ FC V+
Sbjct: 569 RICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDK-GCDPDSYTYRVMIDGFCKVGNVNS 627
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ G +P + + +IN LC + ++ +A M+ G+ P
Sbjct: 628 GYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP 677
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLS 63
GL + F +I C + ++ A ++F +M+++ R + +Y I++ + ++ ++
Sbjct: 533 GLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDM 592
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVE-LFREMEATNCKPSPHIFCTLI 122
+++ EM D G +PD +Y +MI+ C + + L +E+E PS F +I
Sbjct: 593 AQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIE-IGFVPSLTTFGRVI 651
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEA 150
N L + R+ EA+ + G PEA
Sbjct: 652 NCLCVQHRVHEAVGIVHLMVRTGVVPEA 679
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 2/302 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + N +I+ L K+ ++ A ++F +M R P + +Y +++ + K+
Sbjct: 326 MQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKS 385
Query: 61 LLS-MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
S + + MK+ G P +Y I+I+ C R ++A+ L EM+ P P +C
Sbjct: 386 RASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYC 445
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI+ LG KR A + F + K+ A Y ++ + R++DA M DEM K
Sbjct: 446 SLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL 505
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ Y+ ++ L + G +EA S +RM ++ G P +++Y I++
Sbjct: 506 GCAPDVYAYNALMSGLARTGMLDEALSTMRRM-QEHGCIPDINSYNIILNGLAKTGGPHR 564
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
AM + MK V P + Y+T++ +L H ++A K +EM +G +S++ +
Sbjct: 565 AMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILE 624
Query: 300 AL 301
A+
Sbjct: 625 AI 626
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 159/356 (44%), Gaps = 37/356 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + LI K V A +F++M+ + PD+ +YT L+ G G+
Sbjct: 256 MKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGR 315
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM+ +G PD V MIN A R D+A++LF+EM C PS + T
Sbjct: 316 IDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNT 375
Query: 121 LINGL-GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I L S+ R SE +F + K+ G P + TY+ ++ +C + R+ A +++EM +
Sbjct: 376 IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEK 435
Query: 180 GIGP-----------------------------------NTRTYDIVLHHLIKAGRTEEA 204
G P + R Y +++ HL KAGR ++A
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDA 495
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
++F M+ K G P V Y ++ +D A+ M+ G +P ++ Y+ ++N
Sbjct: 496 INMFDEMN-KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 554
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
L A + M +RP ++ + AL GM E A L ++++ L
Sbjct: 555 GLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTL 610
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 152/314 (48%), Gaps = 3/314 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
+N +I L + E++++M PD +Y+ L+ + + S ++ EM
Sbjct: 197 YNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEM 256
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
K++G +P Y ++I A+ LF EM C+P + LI GLG R+
Sbjct: 257 KENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRI 316
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
EA FF + ++ G P+ N ++ + R++DA ++ EM P+ TY+ +
Sbjct: 317 DEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTI 376
Query: 192 LHHLIKA-GRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+ L ++ R E S F+RM ++ G P+ TY I++ FC +++ AM + +EM +
Sbjct: 377 IKALFESKSRASEVPSWFERM-KESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEK 435
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
G P Y +LI++L + D AC+ FQE+ + ++++ + + L G + A
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDA 495
Query: 311 VVLAQKIDKLRKTP 324
+ + +++KL P
Sbjct: 496 INMFDEMNKLGCAP 509
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 3/257 (1%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCTLINGLGSEKR 130
K +E D +Y +I ++Y E ++ +EM C +P ++ LG+ K
Sbjct: 115 KRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKM 174
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYD 189
+S+A+ F Q K R +P A YN+++ + + + +EM G P+T TY
Sbjct: 175 VSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYS 234
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ K GR + A + M ++ G +PT Y +++ +F V A+ +++EM+
Sbjct: 235 ALISAFCKLGRRDSATQLLNEM-KENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRH 293
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+ P + Y+ LI L ++D+A +F EM G RP + +N+ L G +
Sbjct: 294 QYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDD 353
Query: 310 AVVLAQKIDKLRKTPLV 326
A+ L Q++ LR P V
Sbjct: 354 AMKLFQEMGTLRCIPSV 370
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 3/206 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ G + LID L K++ + A E+F ++K+ + Y ++++ G+
Sbjct: 432 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 491
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM G PDV +Y +++ DEA+ R M+ C P + +
Sbjct: 492 LDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNI 551
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL A++ K+ P+ +YN V+GA + +A ++M+EM G
Sbjct: 552 ILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLG 611
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYS 206
+ TY +L + G+ + Y+
Sbjct: 612 FEYDLITYSSILEAI---GKVDHEYT 634
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 135 LQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK---CGIGPNTRTYDI 190
+QFF +K+R +E + TY A++ + + ++M+ EM + C + P +
Sbjct: 107 MQFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSE-- 164
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
V+ L A +A ++F ++ + +PT Y ++ M + Q +++EM
Sbjct: 165 VVRMLGNAKMVSKAIAIFYQIKTRK-CQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTE 223
Query: 251 G-VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
G P YS LI++ C + D A + EM + G++P ++++ L
Sbjct: 224 GHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTML 271
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 1/282 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G KQ + +N LID L S +E + +MK F P ++ + ++++
Sbjct: 443 MVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRRED 502
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++ REM+ G EP + Y +++ C KR EA EM P +
Sbjct: 503 VTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSA 562
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I+G K + +AL+ F RG+ P+ YN ++ +C R+++A+ ++DEM G
Sbjct: 563 AIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKG 622
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY++++ K G ++A+ RM K EP V TY ++ C + D A
Sbjct: 623 LVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKE-REPNVITYTTLIDGLCNAGRPDDA 681
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+ +W+EM+ +G P + LI+ LC D A YF+EM
Sbjct: 682 IHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREM 723
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+ LCK + A +M + F PDI +Y+ ++G+ + K + E++R++
Sbjct: 525 YTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDIC 584
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G+ PDVV+Y +IN C KR EA ++ EM A PS + LI+G +
Sbjct: 585 ARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDID 644
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+A + + EP TY ++ C + R +DA + +EMR G PN ++ ++
Sbjct: 645 QAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALI 704
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K G + A F+ M + P Y ++ F N +A I EM A+G
Sbjct: 705 HGLCKCGWPDAALLYFREMGER--ETPDTIVYVALITSFISNKNPTLAFEILKEMVAKGK 762
Query: 253 LP 254
P
Sbjct: 763 FP 764
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 148/329 (44%), Gaps = 7/329 (2%)
Query: 1 MDKFGLKQEL-----PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW 55
++KF + +E+ F+ +ID LC + ++ A +F M + ++ Y L++
Sbjct: 403 VNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKL 462
Query: 56 GQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSP 115
L + +EMK GF P ++ + C + A+++ REM +P
Sbjct: 463 SNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWI 522
Query: 116 HIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDE 175
+ L+ L KR +EA F + + GF P+ Y+A + + ++ A + +
Sbjct: 523 KHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRD 582
Query: 176 MRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNA 235
+ G P+ Y+ +++ K R EA+ + M K G P+V TY +++ +C N
Sbjct: 583 ICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAK-GLVPSVVTYNLLIDGWCKNG 641
Query: 236 QVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
+D A M + P + Y+TLI+ LC+ + DDA + EM G P F
Sbjct: 642 DIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFI 701
Query: 296 NLKQALRDEGMEETAVVLAQKIDKLRKTP 324
L L G + A++ +++ + R+TP
Sbjct: 702 ALIHGLCKCGWPDAALLYFREMGE-RETP 729
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 126/276 (45%), Gaps = 2/276 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N + LC+ V A ++ +M+ +P IK YT+L++ ++K EM
Sbjct: 491 NSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVR 550
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
+GF PD+V+Y I+ K D+A+E+FR++ A P + TLING KR+SE
Sbjct: 551 EGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSE 610
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
A + +G P TYN ++ +C + I+ A+ + M PN TY ++
Sbjct: 611 AHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLID 670
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
L AGR ++A ++ M R G P ++ ++ C D A+ + EM R
Sbjct: 671 GLCNAGRPDDAIHLWNEM-RGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERET- 728
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
P +Y LI S A + +EM+ G P
Sbjct: 729 PDTIVYVALITSFISNKNPTLAFEILKEMVAKGKFP 764
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 140/373 (37%), Gaps = 85/373 (22%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ G++ F LI + V++A ++F KM+K F PD+ Y L+ G +K
Sbjct: 254 MEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKE 313
Query: 61 LLSMNEVYREMKDDGFEPDV---------------------------------VSYGIMI 87
+ + EMK+ G +PD+ + Y ++
Sbjct: 314 IEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVL 373
Query: 88 NAHCSAKRYDEAVELFREMEATN----------------CKPSPHIFCTLINGLGSEKRL 131
N + K D+A L M N +P F +I+GL + +L
Sbjct: 374 NGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKL 433
Query: 132 SEALQFF-----------------------------------GQSKKRGFEPEAPTYNAV 156
AL F + K GF P T+N++
Sbjct: 434 DLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSI 493
Query: 157 VGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPG 216
G C + A M+ EMR G P + Y +++ L K R+ EA + M R+ G
Sbjct: 494 FGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVRE-G 552
Query: 217 TEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDAC 276
P + Y + F VD A+ I+ ++ ARG P + Y+TLIN C ++ +A
Sbjct: 553 FLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAH 612
Query: 277 KYFQEMLDIGIRP 289
EM+ G+ P
Sbjct: 613 DILDEMVAKGLVP 625
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 139/325 (42%), Gaps = 57/325 (17%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ----KNLLSMNEVYREMK 72
+ + KS ++ + +M ++PD + T +L+ + K L NE+Y
Sbjct: 166 LGAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGW 225
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
DG V+S ++ + C D+A EL ME + + FC LI+G + R+
Sbjct: 226 VDG---HVLSILVLTFSKCG--EVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVD 280
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT----- 187
+ALQ F + +K GF P+ Y+A++G C I A ++ EM++ GI P+ +
Sbjct: 281 KALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLI 340
Query: 188 ----------------------------YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE- 218
Y+ VL+ L+ ++AY + M+ T+
Sbjct: 341 PYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDN 400
Query: 219 --------------PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
P +++ IV+ C ++D+A+ ++ +M G + +Y+ LI+
Sbjct: 401 FEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLID 460
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRP 289
L + ++L++ +EM G RP
Sbjct: 461 KLSNSNRLEECYLLLKEMKGSGFRP 485
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 133/323 (41%), Gaps = 50/323 (15%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
L+ T K V++A E+ ++M+ + K++ +L+ G+ +Q + +++++M+ G
Sbjct: 234 LVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSG 293
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI------------- 122
F PDV Y +I C+ K ++A+ L EM+ P I LI
Sbjct: 294 FAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLI 353
Query: 123 --------------------NGLGSEKRLSEALQFF----GQSKKRGFE----------- 147
NGL + K + +A G + FE
Sbjct: 354 EERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMV 413
Query: 148 -PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P +++ V+ C + +++ A + +M + G N Y+ ++ L + R EE Y
Sbjct: 414 RPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYL 473
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
+ K M + G PT T+ + C V A+ + EM+ G P + Y+ L+ L
Sbjct: 474 LLKEM-KGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQL 532
Query: 267 CHEDKLDDACKYFQEMLDIGIRP 289
C + +AC + EM+ G P
Sbjct: 533 CKRKRSAEACNFLAEMVREGFLP 555
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 36/348 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ K V +A EV M+ ++K+Y++L+ G+ + K+ +
Sbjct: 459 GFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANA 518
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ ++ DG +PDVV Y +I A C D A+ +EM+ +P+ F +I+G
Sbjct: 519 FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG 578
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ AL+ F + G P T+NA++ ++ A ++DEM GI PN
Sbjct: 579 FARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPN 638
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------------ 232
TY ++H G T +A+ F ++ + G E V TYE +++ C
Sbjct: 639 EHTYTTIMHGYASLGDTGKAFEYFTKL-KTEGLELDVYTYEALLKACCKSGRMQSALAVT 697
Query: 233 --------------YNAQVDMAMR---IWD------EMKARGVLPVMHMYSTLINSLCHE 269
YN +D R +W+ +MK GV P +H Y++ IN+ C
Sbjct: 698 REMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKA 757
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ A K QEM +G++P + ++ L + E A+ Q++
Sbjct: 758 GDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEM 805
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 1/299 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GLK ++ +N +I C +++RA +M+K R P +++ ++ G+ + ++
Sbjct: 527 KDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMR 586
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E++ M+ G P V ++ +I + ++AVE+ EM P+ H + T++
Sbjct: 587 RALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIM 646
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G S +A ++F + K G E + TY A++ A C S R+ A + EM I
Sbjct: 647 HGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIP 706
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
NT Y+I++ + G EA + ++M ++ G +P + TY + C + A +
Sbjct: 707 RNTFVYNILIDGWARRGDVWEAAELMQQM-KQEGVQPDIHTYTSFINACCKAGDMQRATK 765
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM+ GV P + Y+TLI+ + A K FQEM G++P ++ L +L
Sbjct: 766 TIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 824
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 150/312 (48%), Gaps = 2/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I C++ ++ +A+ + +M++ D I Y +++G+ N V+ +K
Sbjct: 397 YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 456
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF P V+SYG +IN + + +A+E+ + ME K + + LING K +
Sbjct: 457 ECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWA 516
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A F K G +P+ YN ++ A+C ++ A R + EM+K P TRT+ ++
Sbjct: 517 NAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPII 576
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H ++G A +F M R G PTV T+ ++ Q++ A+ I DEM G+
Sbjct: 577 HGFARSGDMRRALEIFDMM-RWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGI 635
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P H Y+T+++ A +YF ++ G+ + L +A G ++A+
Sbjct: 636 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 695
Query: 313 LAQKIDKLRKTP 324
+ +++ +K P
Sbjct: 696 VTREMSS-QKIP 706
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 1/225 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI L + +E+A E+ D+M P+ +YT ++ G+ + E + ++K
Sbjct: 607 FNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLK 666
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G E DV +Y ++ A C + R A+ + REM + + ++ LI+G +
Sbjct: 667 TEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVW 726
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + Q K+ G +P+ TY + + A C + + A + + EM G+ PN +TY ++
Sbjct: 727 EAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLI 786
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
H +A E+A F+ M + G +P + Y ++ A V
Sbjct: 787 HGWARASLPEKALKCFQEM-KSAGLKPDKAVYHCLMTSLLSRASV 830
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 144/331 (43%), Gaps = 42/331 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI R +E A KMK+ + + +Y+IL+ G+ + + + + ++E K
Sbjct: 327 YTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAK 386
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING---LGSEK 129
+ + + YG +I AHC A +A L REME I+ T+++G +G+E+
Sbjct: 387 ERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEE 446
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ L F + K+ GF P +Y ++ Y +++ A + M GI N +TY
Sbjct: 447 K---CLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYS 503
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR------- 242
++++ ++ A++VF+ + K G +P V Y ++R FC +D A+R
Sbjct: 504 MLINGFVRLKDWANAFAVFEDVV-KDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQK 562
Query: 243 ----------------------------IWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
I+D M+ G +P +H ++ LI L + +++
Sbjct: 563 ERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEK 622
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A + EM GI P ++ + G
Sbjct: 623 AVEILDEMSLAGISPNEHTYTTIMHGYASLG 653
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 145/313 (46%), Gaps = 7/313 (2%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF ++++T + + + + F+++KK P K + +++ + ++ ++ + M
Sbjct: 262 DFRKVLET--EPENWQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESM 315
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G EP Y +I+A+ + +EA+ R+M+ + S + L+ G
Sbjct: 316 RARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADA 375
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A +F ++K+R A Y ++ A+C + + A ++ EM + GI Y +
Sbjct: 376 EAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTM 435
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ G E+ VF R+ ++ G P+V +Y ++ ++ +V A+ + M+ G
Sbjct: 436 MDGYTIIGNEEKCLIVFDRL-KECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAG 494
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ M YS LIN +A F++++ G++P L++N+ +A G + A+
Sbjct: 495 IKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAI 554
Query: 312 VLAQKIDKLRKTP 324
+++ K R P
Sbjct: 555 RTVKEMQKERHRP 567
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID + V A E+ +MK+ PDI +YT + + ++ + +EM+
Sbjct: 712 YNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEME 771
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P++ +Y +I+ A ++A++ F+EM++ KP ++ L+ L S ++
Sbjct: 772 VVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVA 831
Query: 133 EALQFFG 139
E + G
Sbjct: 832 EEYIYSG 838
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ ++ + I+ CK+ ++RA + +M+ P+IK+YT L+ GW +
Sbjct: 735 MKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASL 794
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR------YDEAVELFREMEATNCKPS 114
+ ++EMK G +PD Y ++ + S Y V + REM
Sbjct: 795 PEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREM-------- 846
Query: 115 PHIFCTLINGLGSEKRLSEALQF-------FGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
I C L +G+ S+ L+ ++ ++ F P+ +YN V + + ++
Sbjct: 847 --IECELTVDMGTAVHWSKCLRKIERTGGELTEALQKTFPPDWNSYNIHVNSDD-ELDVD 903
Query: 168 DAY 170
DAY
Sbjct: 904 DAY 906
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 1/194 (0%)
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E Q Q+ +R +P + +V Y ++ A + MR GI P + Y ++
Sbjct: 272 ENWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLI 331
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H EEA S ++M ++ G E ++ TY I+V F A + A + E K R
Sbjct: 332 HAYAVGRDMEEALSCVRKM-KEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHT 390
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+Y +I + C + A +EM + GI P ++ + G EE ++
Sbjct: 391 TLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLI 450
Query: 313 LAQKIDKLRKTPLV 326
+ ++ + TP V
Sbjct: 451 VFDRLKECGFTPSV 464
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 146/282 (51%), Gaps = 4/282 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G++ L FN LID LCK V A+++ + +R D+ +Y L++G+ + +L S
Sbjct: 127 GVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSA 186
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ M G E + +SY I+IN +C + +EA+ L+ EM +P+ + TL+ G
Sbjct: 187 RKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTG 246
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L ++ +A + FG K G ++ Y + C + + +A + +E++ +
Sbjct: 247 LLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLD 306
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
+Y ++ L KAG+ E A+ FK++S++ G +P V T I++ FC QVD A ++
Sbjct: 307 FESYSRLIDGLCKAGKVEIAWEFFKQLSQE-GLQPNVVTCNIMIHGFCRVEQVDKANILF 365
Query: 245 DEMKA---RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++M+ G P + Y+TL+ C +KL++ +M
Sbjct: 366 EKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMF 407
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 142/323 (43%), Gaps = 18/323 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL +L N L + LC V + +R + PDI +Y L++G + +
Sbjct: 5 GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVA 64
Query: 65 N-----------------EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
E++ EMK G P+V+SY +++ C A + +E+ LF EM
Sbjct: 65 TCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMV 124
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
+P+ F LI+ L E ++ EA + + +RG + TYN+++ +C ++
Sbjct: 125 DQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLS 184
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
A ++ M G N +Y I+++ K + EEA +++ M + G P V TY +
Sbjct: 185 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ-VGKRPNVKTYSTL 243
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +V A +++ MKA G+ +Y ++ LC L +A + F E+
Sbjct: 244 LTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNF 303
Query: 288 RPPGQLFSNLKQALRDEGMEETA 310
+ + +S L L G E A
Sbjct: 304 KLDFESYSRLIDGLCKAGKVEIA 326
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ CK VE A ++++M + P++K+Y+ LL G Q +
Sbjct: 197 GCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDA 256
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
N+++ MK G D Y I ++ C EA+ELF E+++ N K + LI+G
Sbjct: 257 NKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDG 316
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA---YRMMDEMRKCGI 181
L ++ A +FF Q + G +P T N ++ +C +++ A + M++M + G
Sbjct: 317 LCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGC 376
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
P+ TY+ +L ++ + EE ++ +M ++
Sbjct: 377 TPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 145/323 (44%), Gaps = 4/323 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ +G+ +L F LI C+ + A V KM K ++P I ++ LL G+
Sbjct: 97 MELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNR 156
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + M G+EP+VV Y +I+ C + A+EL EME + T
Sbjct: 157 IGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNT 216
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ GL R S+A + KR P+ T+ A++ + +++A + EM +
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY+ +++ L GR +A F M+ K G P V TY ++ FC VD
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK-GCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
M+++ M G + Y+TLI+ C KL A F M+ + P L
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 301 LRDEGMEETAVVLAQKIDKLRKT 323
L G E+A+V K D +R++
Sbjct: 396 LCVNGEIESALV---KFDDMRES 415
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 138/279 (49%), Gaps = 4/279 (1%)
Query: 7 KQELP---DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
Q LP DF RL+ R E KM+ D+ S+TIL+ + + L
Sbjct: 65 SQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSF 124
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
V +M G+EP +V++G +++ C R +A L M + +P+ ++ TLI+
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
GL L+ AL+ + +K+G + TYN ++ C+S R +DA RM+ +M K I P
Sbjct: 185 GLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
+ T+ ++ +K G +EA ++K M + +P TY ++ C + ++ A +
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMI-QSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+D M ++G P + Y+TLI+ C +D+ K FQ M
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + +N LID LCK+ + A E+ ++M+K+ D+ +Y LL G
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ R+M PDVV++ +I+ DEA EL++EM ++ P+ + +
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+INGL RL +A + F +G P TYN ++ +C +++ ++ M G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ TY+ ++H + G+ A +F M + T P + T+ I++ C N +++ A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT-PDIITHCILLHGLCVNGEIESA 405
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ +D+M+ + Y+ +I+ LC DK++ A + F + G++P + ++ +
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 301 LRDEG 305
L G
Sbjct: 466 LCKNG 470
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 1/287 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+K GL ++ +N L+ LC S A + M KR +PD+ ++T L++ + +Q N
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+Y+EM +P+ V+Y +IN C R +A + F M + C P+ + T
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G + + E ++ F + GF + TYN ++ YC ++ A + M
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ I+LH L G E A F M R+ + Y I++ C +V+ A
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDM-RESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
++ + GV P Y+ +I LC +A + + M + GI
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 134/290 (46%), Gaps = 6/290 (2%)
Query: 23 SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVS 82
S E A +F +M + P I +T LL + ++ ++M+ G D+ S
Sbjct: 49 SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYS 108
Query: 83 YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSK 142
+ I+I+ C R A+ + +M +PS F +L++G R+ +A
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 143 KRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTE 202
K G+EP YN ++ C + +N A +++EM K G+G + TY+ +L L +GR
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
+A + + M ++ P V T+ ++ +F +D A ++ EM V P Y+++
Sbjct: 229 DAARMLRDMMKRS-INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 263 INSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-----KQALRDEGME 307
IN LC +L DA K F M G P ++ L K + DEGM+
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 6/229 (2%)
Query: 95 RYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYN 154
R+++A LF EM + PS F L+ + +R + F + + G + ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
++ +C R++ A ++ +M K G P+ T+ +LH R +A+S+ M K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV-K 169
Query: 215 PGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
G EP V Y ++ C N ++++A+ + +EM+ +G+ + Y+TL+ LC+ + D
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 275 ACKYFQEMLDIGIRPPGQLFSNL-----KQALRDEGMEETAVVLAQKID 318
A + ++M+ I P F+ L KQ DE E ++ +D
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 36/348 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + LI+ K V +A EV M+ ++K+Y++L+ G+ + K+ +
Sbjct: 438 GFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANA 497
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
V+ ++ DG +PDVV Y +I A C D A+ +EM+ +P+ F +I+G
Sbjct: 498 FAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG 557
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+ AL+ F + G P T+NA++ ++ A ++DEM GI PN
Sbjct: 558 FARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPN 617
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC------------ 232
TY ++H G T +A+ F ++ + G E V TYE +++ C
Sbjct: 618 EHTYTTIMHGYASLGDTGKAFEYFTKL-KTEGLELDVYTYEALLKACCKSGRMQSALAVT 676
Query: 233 --------------YNAQVDMAMR---IWD------EMKARGVLPVMHMYSTLINSLCHE 269
YN +D R +W+ +MK GV P +H Y++ IN+ C
Sbjct: 677 REMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKA 736
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ A K QEM +G++P + ++ L + E A+ Q++
Sbjct: 737 GDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEM 784
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 1/299 (0%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GLK ++ +N +I C +++RA +M+K R P +++ ++ G+ + ++
Sbjct: 506 KDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMR 565
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
E++ M+ G P V ++ +I + ++AVE+ EM P+ H + T++
Sbjct: 566 RALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIM 625
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G S +A ++F + K G E + TY A++ A C S R+ A + EM I
Sbjct: 626 HGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIP 685
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
NT Y+I++ + G EA + ++M ++ G +P + TY + C + A +
Sbjct: 686 RNTFVYNILIDGWARRGDVWEAAELMQQM-KQEGVQPDIHTYTSFINACCKAGDMQRATK 744
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL 301
EM+ GV P + Y+TLI+ + A K FQEM G++P ++ L +L
Sbjct: 745 TIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSL 803
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 150/312 (48%), Gaps = 2/312 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +I C++ ++ +A+ + +M++ D I Y +++G+ N V+ +K
Sbjct: 376 YGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLK 435
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ GF P V+SYG +IN + + +A+E+ + ME K + + LING K +
Sbjct: 436 ECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWA 495
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A F K G +P+ YN ++ A+C ++ A R + EM+K P TRT+ ++
Sbjct: 496 NAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPII 555
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H ++G A +F M R G PTV T+ ++ Q++ A+ I DEM G+
Sbjct: 556 HGFARSGDMRRALEIFDMM-RWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGI 614
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
P H Y+T+++ A +YF ++ G+ + L +A G ++A+
Sbjct: 615 SPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALA 674
Query: 313 LAQKIDKLRKTP 324
+ +++ +K P
Sbjct: 675 VTREMSS-QKIP 685
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 1/225 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
FN LI L + +E+A E+ D+M P+ +YT ++ G+ + E + ++K
Sbjct: 586 FNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLK 645
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+G E DV +Y ++ A C + R A+ + REM + + ++ LI+G +
Sbjct: 646 TEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVW 705
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + Q K+ G +P+ TY + + A C + + A + + EM G+ PN +TY ++
Sbjct: 706 EAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLI 765
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
H +A E+A F+ M + G +P + Y ++ A V
Sbjct: 766 HGWARASLPEKALKCFQEM-KSAGLKPDKAVYHCLMTSLLSRASV 809
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 144/331 (43%), Gaps = 42/331 (12%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LI R +E A KMK+ + + +Y+IL+ G+ + + + + ++E K
Sbjct: 306 YTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAK 365
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING---LGSEK 129
+ + + YG +I AHC A +A L REME I+ T+++G +G+E+
Sbjct: 366 ERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEE 425
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
+ L F + K+ GF P +Y ++ Y +++ A + M GI N +TY
Sbjct: 426 K---CLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYS 482
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR------- 242
++++ ++ A++VF+ + K G +P V Y ++R FC +D A+R
Sbjct: 483 MLINGFVRLKDWANAFAVFEDVV-KDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQK 541
Query: 243 ----------------------------IWDEMKARGVLPVMHMYSTLINSLCHEDKLDD 274
I+D M+ G +P +H ++ LI L + +++
Sbjct: 542 ERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEK 601
Query: 275 ACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
A + EM GI P ++ + G
Sbjct: 602 AVEILDEMSLAGISPNEHTYTTIMHGYASLG 632
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 145/313 (46%), Gaps = 7/313 (2%)
Query: 12 DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREM 71
DF ++++T + + + + F+++KK P K + +++ + ++ ++ + M
Sbjct: 241 DFRKVLET--EPENWQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESM 294
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G EP Y +I+A+ + +EA+ R+M+ + S + L+ G
Sbjct: 295 RARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADA 354
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
A +F ++K+R A Y ++ A+C + + A ++ EM + GI Y +
Sbjct: 355 EAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTM 414
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ G E+ VF R+ ++ G P+V +Y ++ ++ +V A+ + M+ G
Sbjct: 415 MDGYTIIGNEEKCLIVFDRL-KECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAG 473
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAV 311
+ M YS LIN +A F++++ G++P L++N+ +A G + A+
Sbjct: 474 IKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAI 533
Query: 312 VLAQKIDKLRKTP 324
+++ K R P
Sbjct: 534 RTVKEMQKERHRP 546
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 64/127 (50%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N LID + V A E+ +MK+ PDI +YT + + ++ + +EM+
Sbjct: 691 YNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEME 750
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +P++ +Y +I+ A ++A++ F+EM++ KP ++ L+ L S ++
Sbjct: 751 VVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVA 810
Query: 133 EALQFFG 139
E + G
Sbjct: 811 EEYIYSG 817
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 1/194 (0%)
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E Q Q+ +R +P + +V Y ++ A + MR GI P + Y ++
Sbjct: 251 ENWQAVVQAFERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLI 310
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H EEA S ++M ++ G E ++ TY I+V F A + A + E K R
Sbjct: 311 HAYAVGRDMEEALSCVRKM-KEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHT 369
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
+Y +I + C + A +EM + GI P ++ + G EE ++
Sbjct: 370 TLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLI 429
Query: 313 LAQKIDKLRKTPLV 326
+ ++ + TP V
Sbjct: 430 VFDRLKECGFTPSV 443
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ ++ + I+ CK+ ++RA + +M+ P+IK+YT L+ GW +
Sbjct: 714 MKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASL 773
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKR------YDEAVELFREMEATNCKPS 114
+ ++EMK G +PD Y ++ + S Y V + REM
Sbjct: 774 PEKALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREM-------- 825
Query: 115 PHIFCTLINGLGSEKRLSEALQF-------FGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
I C L +G+ S+ L+ ++ ++ F P+ +YN V + + ++
Sbjct: 826 --IECELTVDMGTAVHWSKCLRKIERTGGELTEALQKTFPPDWNSYNIHVNSDD-ELDVD 882
Query: 168 DAY 170
DAY
Sbjct: 883 DAY 885
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 3/321 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ + LI LC + V+ A E+ ++M + +P++ Y+ LL G+ +
Sbjct: 120 MQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGR 179
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
S+ +V+ EM G EPDVV Y +I++ C + +A + M +P+ +
Sbjct: 180 WESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNV 239
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK-- 178
LIN + E + EAL ++G +P+ TYN ++ + +++A +++EM +
Sbjct: 240 LINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGE 299
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ P+ T++ V+H L K G +A V M+ G + + +++ +V
Sbjct: 300 TRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAEN-GCRCNLVAFNLLIGGLLRVHKVK 358
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM + DEM + G+ P YS LIN C +++ A Y EM G+ P + L
Sbjct: 359 KAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLL 418
Query: 299 QALRDEGMEETAVVLAQKIDK 319
+A+ D+GM A L ++D+
Sbjct: 419 KAMCDQGMMGQARDLFNEMDR 439
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 6/281 (2%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMK---KRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
+N ++ LC+ ++ A + M + P+ SYT L+ + + R
Sbjct: 59 YNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLR 118
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
M+D G PDVV+YG +I C A D AVEL EM + +P+ ++ L++G
Sbjct: 119 SMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTG 178
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
R + F + RG EP+ Y A++ + C ++ A R+MD M + G+ PN TY+
Sbjct: 179 RWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYN 238
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM-- 247
++++ + K G EA + K MS K G +P V TY ++ ++D AM + +EM
Sbjct: 239 VLINSMCKEGSVREALDLRKNMSEK-GVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
V P + ++++I+ LC + A + M + G R
Sbjct: 298 GETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCR 338
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 143/297 (48%), Gaps = 4/297 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G++ ++ + LID+LC+ V++A V D M +R +P++ +Y +L+ ++ +
Sbjct: 190 MSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGS 249
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM--EATNCKPSPHIF 118
+ ++ + M + G +PDVV+Y +I S DEA+ L EM T +P F
Sbjct: 250 VREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTF 309
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
++I+GL + +ALQ + G +N ++G ++ A +MDEM
Sbjct: 310 NSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMAS 369
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ P++ TY I+++ K + E A S M R G EP Y +++ C +
Sbjct: 370 SGLQPDSFTYSILINGFCKMRQVERAESYLSEM-RHQGMEPEPVHYIPLLKAMCDQGMMG 428
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFS 295
A +++EM L YST+I+ + A ++ ++M+D G+ P +S
Sbjct: 429 QARDLFNEMDRNCKLDAAA-YSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYS 484
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 140/329 (42%), Gaps = 43/329 (13%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ--- 57
M + GL+ + +N LI+++CK V A ++ M ++ PD+ +Y L+ G
Sbjct: 225 MTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLE 284
Query: 58 ------------------QKNLLSMNEVYRE----------------MKDDGFEPDVVSY 83
+ +L++ N V M ++G ++V++
Sbjct: 285 MDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAF 344
Query: 84 GIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKK 143
++I + +A+EL EM ++ +P + LING +++ A + + +
Sbjct: 345 NLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRH 404
Query: 144 RGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM-RKCGIGPNTRTYDIVLHHLIKAGRTE 202
+G EPE Y ++ A C + A + +EM R C + + Y ++H K+G +
Sbjct: 405 QGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKL--DAAAYSTMIHGAFKSGEKK 462
Query: 203 EAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTL 262
A K M + G P TY I + MF + + A R+ +M A G +P + ++ +L
Sbjct: 463 IAEEFLKDMIDE-GLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSL 521
Query: 263 INSLCHEDKLDDACKYFQEML--DIGIRP 289
I + + + +EM D+ + P
Sbjct: 522 IQGYGAKGDTEKILELTREMTAKDVALDP 550
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + ++ +I KS + A+E M PD +Y+I + + + +L +
Sbjct: 442 KLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAER 501
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
V ++M GF PDV + +I + + ++ +EL REM A + P I T++ LG
Sbjct: 502 VLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLG 561
Query: 127 SE---KRLSEALQFFGQSKKRG 145
+ ++L ++L F +G
Sbjct: 562 ASIEGQKLLQSLPGFDTEISKG 583
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Query: 183 PNTR---TYDIVLHHLIKAGRTEEAYSVFKRMSRKP--GTEPTVSTYEIVVRMFCYNAQV 237
P+ R +Y+ VL L + G + A + + MS +P + P +Y ++R C + +
Sbjct: 51 PSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRA 110
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
A+ + M+ GV P + Y TLI LC +D A + EM + GI P ++S L
Sbjct: 111 AQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCL 170
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 14/140 (10%)
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTE--------PTVS---TYEIVVRMFCYNAQVDMA 240
L L++ GR E A + + + P E P+V +Y V+ C +D A
Sbjct: 16 LAVLLRRGRGEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAA 75
Query: 241 MRIWDEMKARGVL---PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+ + M L P Y+TL+ +LC + + A + M D G+RP + L
Sbjct: 76 LFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTL 135
Query: 298 KQALRDEGMEETAVVLAQKI 317
+ L D +TAV L ++
Sbjct: 136 IRGLCDAADVDTAVELLNEM 155
>gi|413934769|gb|AFW69320.1| hypothetical protein ZEAMMB73_542469 [Zea mays]
Length = 539
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 150/311 (48%), Gaps = 8/311 (2%)
Query: 17 IDTLCKSRHVERAQEVFDKMKKRR--FDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDD 74
ID LCK H A + ++++ + PD++ Y ILL GW + + L +++ M+D+
Sbjct: 153 IDALCKEGHPRAAALLVAQIRREDDGWAPDVRIYNILLNGWSRARRLDKAEKLWAAMRDE 212
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEA 134
G P VV+YG I+AHC +R D A+ L +M + + ++ L R +A
Sbjct: 213 GVRPTVVTYGTFIDAHCVMRRPDHAMALLDQMREEGIEANLLTCNPIVYALAHAGRFGDA 272
Query: 135 LQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
+ + G P T+N++V YC + A R++ M GI P RTY+
Sbjct: 273 HKVLEKFPLYGVAPNISTFNSLVFGYCRHGDLAGASRVLKAMLGRGISPTARTYNYFFTV 332
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
+ + +++ +M G P TY ++++M C ++++ +++ EM+ G P
Sbjct: 333 FARNLSIDLGMNLYVKMVSN-GYAPDRLTYHLLIKMLCEANRLELTLQMLQEMRNSGFEP 391
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLA 314
+ + LI+ LC + ++A F++M + G+ P + L + L+ G+ V L
Sbjct: 392 DLATSTMLIHLLCRRHQFEEAFAEFEQMFERGMVPQYITYRMLMRELKRLGL----VKLV 447
Query: 315 QKI-DKLRKTP 324
QK+ D +R P
Sbjct: 448 QKLADLMRSVP 458
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 82/199 (41%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ L N ++ L + A +V +K P+I ++ L+ G+ + +
Sbjct: 244 MREEGIEANLLTCNPIVYALAHAGRFGDAHKVLEKFPLYGVAPNISTFNSLVFGYCRHGD 303
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + V + M G P +Y D + L+ +M + P +
Sbjct: 304 LAGASRVLKAMLGRGISPTARTYNYFFTVFARNLSIDLGMNLYVKMVSNGYAPDRLTYHL 363
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI L RL LQ + + GFEP+ T ++ C + +A+ ++M + G
Sbjct: 364 LIKMLCEANRLELTLQMLQEMRNSGFEPDLATSTMLIHLLCRRHQFEEAFAEFEQMFERG 423
Query: 181 IGPNTRTYDIVLHHLIKAG 199
+ P TY +++ L + G
Sbjct: 424 MVPQYITYRMLMRELKRLG 442
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 150/320 (46%), Gaps = 2/320 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQK 59
M K G K + LID LCK E+A +F K+ + + P++ +YT ++ G+ ++
Sbjct: 327 MVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKED 386
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L + MK+ G P+ +Y +I+ H A +++A EL M + +
Sbjct: 387 KLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYN 446
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
I+ L + R EA + + + G + + TY ++ C +A +M K
Sbjct: 447 AFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKA 506
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G+ P+ TY+ ++ + R EE+ +F + G PT TY ++ +C + V +
Sbjct: 507 GVQPDMHTYNTLIAAFSRQRRMEESEKLFAE-AVGLGLVPTKETYTSMICGYCRDRNVSL 565
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
A++ ++ M G P Y LI+ LC E KLD+AC+ ++ M+D G+ P L
Sbjct: 566 ALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLTLAY 625
Query: 300 ALRDEGMEETAVVLAQKIDK 319
+ TA+V+ +++DK
Sbjct: 626 EYCKQDDSATAMVILERLDK 645
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 4/284 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL + LID K+ + E+A E+ D M K F +I +Y ++ ++
Sbjct: 398 MKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGR 457
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ ++ G + D V+Y I+I+ C EA+ F +M +P H + T
Sbjct: 458 FLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNT 517
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI ++R+ E+ + F ++ G P TY +++ YC ++ A + + M G
Sbjct: 518 LIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHG 577
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
P++ TY ++ L K + +EA +++ M K G P T + +C A
Sbjct: 578 CTPDSLTYGALISGLCKESKLDEACQLYEAMVDK-GLSPCEVTRLTLAYEYCKQDDSATA 636
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
M I + + + + ++ TLI LC E K+ A +F ++LD
Sbjct: 637 MVILERLDKKLWIRTVN---TLIRKLCSERKVGMAVLFFHKLLD 677
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 148/354 (41%), Gaps = 38/354 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ GL + N + + V A+ VFD+M+ R PD SY ++ + +
Sbjct: 187 MENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGR 246
Query: 61 LLSMNEVYREMKDDGF-----------------------------------EPDVVSYGI 85
+ + ++M GF +P+++++
Sbjct: 247 ISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTS 306
Query: 86 MINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQ-SKKR 144
+IN C +A E+ EM KP+ + LI+GL + +A + F + +
Sbjct: 307 LINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSD 366
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
++P TY +++ YC ++N A ++ M++ G+ PNT+TY ++ KAG E+A
Sbjct: 367 DYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKA 426
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
Y + M K G + TY + C + A ++ + G+ Y+ LI+
Sbjct: 427 YELMDLMG-KEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILIS 485
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQAL-RDEGMEETAVVLAQKI 317
LC +A +F +M G++P ++ L A R MEE+ + A+ +
Sbjct: 486 ELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAV 539
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 160/335 (47%), Gaps = 21/335 (6%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD ++++I LC + VE+A ++F +MK+ PD+ YT L++ + + +
Sbjct: 219 IPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARN 278
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM+ DG P+VV+Y +I+A+ +++ +A E++ M + C P+ + LI+GL
Sbjct: 279 WFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLC 338
Query: 127 SEKRLSEALQFFGQSKKRGF-----------------EPEAPTYNAVVGAYCWSMRINDA 169
++ +A Q + KK EP TY A+V C + ++ +A
Sbjct: 339 KAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEA 398
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
++ M G PN YD ++ KAG+ +EA VF M + G +P V TY ++
Sbjct: 399 RDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTM-LECGYDPNVYTYSSLID 457
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ ++D+A+++ +M P + +Y+ +I+ LC K D+A K M + G P
Sbjct: 458 RLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNP 517
Query: 290 PGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++ + G E + L Q++ P
Sbjct: 518 NVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAP 552
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 152/334 (45%), Gaps = 53/334 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G+ ++ + LID+ CK+ +E+A+ FD+M++ P++ +YT L+ + + +
Sbjct: 248 MKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRK 307
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC--------- 111
+ NEVY M G P++V+Y +I+ C A + ++A ++++ M+ N
Sbjct: 308 VSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHF 367
Query: 112 --------KPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWS 163
+P+ + L++GL ++ EA G EP Y+A++ C +
Sbjct: 368 RVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKA 427
Query: 164 MRINDAYRMMDEMRKCGIGPNTRTY------------------------------DIVLH 193
++++A + M +CG PN TY ++V++
Sbjct: 428 GKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIY 487
Query: 194 H-----LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
L K G+T+EAY + M K G P V TY ++ F + +V+ + + +M
Sbjct: 488 TEMIDGLCKVGKTDEAYKLMVMMEEK-GCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMS 546
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
++G P Y LIN C LD+A K +EM
Sbjct: 547 SKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 32/333 (9%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFD----------PDIKSYTILLEGWGQQKNLL 62
+N LI +C S E ++V D +K + +I +++ L G G+ +
Sbjct: 150 YNILIGGICSSE--EPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAY 207
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ V REM GF PD +Y +I C+A + ++A +LF+EM+ P +++ TLI
Sbjct: 208 N---VIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLI 264
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+ + +A +F + ++ G P TY A++ AY S +++ A + + M G
Sbjct: 265 DSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCT 324
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK----------------PGTEPTVSTYEI 226
PN TY ++ L KAG+ E+A ++K M ++ EP V TY
Sbjct: 325 PNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGA 384
Query: 227 VVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
+V C QV A + M G P +Y LI+ C KLD+A + F ML+ G
Sbjct: 385 LVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECG 444
Query: 287 IRPPGQLFSNLKQAL-RDEGMEETAVVLAQKID 318
P +S+L L +D+ ++ VL++ ++
Sbjct: 445 YDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE 477
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 18/261 (6%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFD-----------------PDIKS 47
G + + LID LCK+ +E+A +++ MKK + P++ +
Sbjct: 322 GCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFT 381
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
Y L++G + + ++ + M +G EP+ V Y +I+ C A + DEA E+F M
Sbjct: 382 YGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTML 441
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
P+ + + +LI+ L +KRL AL+ + + P Y ++ C + +
Sbjct: 442 ECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 501
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
+AY++M M + G PN TY ++ K+GR E+ + ++MS K G P TY ++
Sbjct: 502 EAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSK-GCAPNFVTYRVL 560
Query: 228 VRMFCYNAQVDMAMRIWDEMK 248
+ C +D A ++ +EMK
Sbjct: 561 INHCCSTGLLDEAHKLLEEMK 581
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 146/324 (45%), Gaps = 44/324 (13%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD + ++I LC++ E A + +M+ P++ +Y ILL G ++ L
Sbjct: 39 VPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKR 98
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ M +G P + +++A+C + Y A +L ++M C+P ++ LI G+
Sbjct: 99 ILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGIC 158
Query: 127 S------------EKRLSEALQF------------------FGQSKK----------RGF 146
S EK E L+ G+ +K +GF
Sbjct: 159 SSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGF 218
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P+ TY+ V+G C + ++ A+++ EM++ GI P+ Y ++ KAG E+A +
Sbjct: 219 IPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARN 278
Query: 207 VFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
F M R G P V TY ++ + + +V A +++ M ++G P + Y+ LI+ L
Sbjct: 279 WFDEMERD-GCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337
Query: 267 CHEDKLDDACKYFQEMLDIGIRPP 290
C K++ A + ++ M + P
Sbjct: 338 CKAGKIEKASQIYKIMKKENVEIP 361
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 147/321 (45%), Gaps = 21/321 (6%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K + +F+R LC E+A V +M + F PD +Y+ ++ + +
Sbjct: 187 KVNISNFSR---CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQ 243
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++EMK +G PDV Y +I++ C A ++A F EME C P+ + LI+
Sbjct: 244 LFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYL 303
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG---- 182
+++S+A + + +G P TY A++ C + +I A ++ M+K +
Sbjct: 304 KSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDV 363
Query: 183 -------------PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
PN TY ++ L KA + +EA + K MS + G EP Y+ ++
Sbjct: 364 DMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE-GCEPNHVVYDALID 422
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
C ++D A ++ M G P ++ YS+LI+ L + +LD A K +ML+ P
Sbjct: 423 GCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAP 482
Query: 290 PGQLFSNLKQALRDEGMEETA 310
+++ + L G + A
Sbjct: 483 NVVIYTEMIDGLCKVGKTDEA 503
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ L+D LCK+ V+ A+++ M +P+ Y L++G + L EV+ M
Sbjct: 382 YGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTML 441
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+ G++P+V +Y +I+ KR D A+++ +M +C P+ I+ +I+GL +
Sbjct: 442 ECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 501
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
EA + +++G P TY A++ + S R+ ++ +M G PN TY +++
Sbjct: 502 EAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLI 561
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+H G +EA+ + + M ++ V+ Y V+ F N + ++ + E+
Sbjct: 562 NHCCSTGLLDEAHKLLEEM-KQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISENDS 618
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEM 282
+PV +Y LI++ +L+ A + +E+
Sbjct: 619 VPVAPVYRVLIDNFIKAGRLEIALELNEEL 648
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
E ++ + F PD V Y MI+ C A ++EA++ M A++C P+ + L+ G
Sbjct: 28 EALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGC 87
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
++++L + G P +N++V AYC S AY+++ +M +CG P
Sbjct: 88 LNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGY 147
Query: 186 RTYDIVLHHLIKA----------------------------------------GRTEEAY 205
Y+I++ + + G+ E+AY
Sbjct: 148 VVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAY 207
Query: 206 SVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS 265
+V + M K G P STY V+ C ++V+ A +++ EMK G+ P +++Y+TLI+S
Sbjct: 208 NVIREMMSK-GFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266
Query: 266 LCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
C ++ A +F EM G P ++ L A
Sbjct: 267 FCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHA 301
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 112/280 (40%), Gaps = 44/280 (15%)
Query: 71 MKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKR 130
M G+ D + G ++ C + ++ EA+ L + E P ++ +I+GL
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEEFV---PDTVLYTKMISGLCEASL 57
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
EA+ F + + P TY ++ ++ R++ M G P+ R ++
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ-----VDMAMRIWD 245
++H ++G AY + K+M + G +P Y I++ C + + +D+A + +
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQ-CGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYG 176
Query: 246 -----------------------------------EMKARGVLPVMHMYSTLINSLCHED 270
EM ++G +P YS +I LC+
Sbjct: 177 EMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNAS 236
Query: 271 KLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
K++ A + FQEM GI P +++ L + G E A
Sbjct: 237 KVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQA 276
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 95/276 (34%), Gaps = 73/276 (26%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M++ G + + +ID KS VE+ E+ +M + P+
Sbjct: 510 MEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNF--------------- 554
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V+Y ++IN CS DEA +L EM+ T +
Sbjct: 555 --------------------VTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRK 594
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I G E S L F + + P AP Y ++ +
Sbjct: 595 VIEGFNREFIASLYLSF--EISENDSVPVAPVYRVLIDNF-------------------- 632
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR-KPGTEPTVSTYEIVVRMFCYNAQVDM 239
IKAGR E A + + +S P + + + ++ + D
Sbjct: 633 ---------------IKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADK 677
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
A ++ +M +RG +P + + LI L ++ ++A
Sbjct: 678 AFELYADMISRGSIPELSILVHLIKGLLRVNRWEEA 713
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
H L K+G+ EA S+ ++ P T Y ++ C + + AM M+A
Sbjct: 18 HSLCKSGKWREALSLLEKEEFVPDT----VLYTKMISGLCEASLFEEAMDFLTRMRASSC 73
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVV 312
LP + Y L+ +++KL + M+ G P ++F++L A G A
Sbjct: 74 LPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYK 133
Query: 313 LAQKIDKLRKTP 324
L +K+ + P
Sbjct: 134 LLKKMVQCGCQP 145
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 162/322 (50%), Gaps = 13/322 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVER-AQEVFDKMKKRRFDPDIKSYTILLEGWGQQK 59
M + G++++ +N LI + C+ R + R A +VFD+MK F+PD ++ LL+ +G+ +
Sbjct: 246 MKEDGIERDRYTYNTLI-SCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKAR 304
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
V + M++ G P VV+Y +I+A+ +EA+EL +EME KP +
Sbjct: 305 KHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYT 364
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
TLI+GL ++ AL + + + G P TYNA++ + + + + D++R
Sbjct: 365 TLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSA 424
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ T++ +L + G E VFK M +K G P TY ++ + D
Sbjct: 425 GYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEM-KKAGYIPERDTYVSLISSYSRCGLFDQ 483
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
AM I+ M G+ P + Y+ ++++L + + A K F EM+D +P +S+L
Sbjct: 484 AMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLH 543
Query: 300 ALRDEGMEETAVVLAQKIDKLR 321
A + A+K+DK++
Sbjct: 544 AYAN----------AKKLDKMK 555
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 2/266 (0%)
Query: 43 PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCS-AKRYDEAVE 101
PD +YT L+ + + V++ M D G +P +V+Y ++ +A+ + + E V
Sbjct: 182 PDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVA 241
Query: 102 LFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC 161
L M+ + + + TLI+ EA Q F + K GFEP+ T+N+++ Y
Sbjct: 242 LVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYG 301
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTV 221
+ + +A ++ M G P+ TY+ ++ +K G EEA + + M + G +P V
Sbjct: 302 KARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFR-GMKPDV 360
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
TY ++ ++D A+ + EM G P + Y+ LI K + F +
Sbjct: 361 VTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDD 420
Query: 282 MLDIGIRPPGQLFSNLKQALRDEGME 307
+ G P ++ L G++
Sbjct: 421 LRSAGYVPDVVTWNTLLSVFGQNGLD 446
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G E + LI + + ++A E++ +M + PDI +Y +L +
Sbjct: 456 MKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGR 515
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+++ EM D +PD +SY +++A+ +AK+ D+ L ++ A + + T
Sbjct: 516 WEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKT 575
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L+ L E + F + ++R + NA+V Y + + ++ M +
Sbjct: 576 LVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENS 635
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I + TY+ ++H + G E+ S+ + + G P +Y V+ + Q+ A
Sbjct: 636 INHSAATYNSLMHMYSRLGDCEKCESILTEI-KSSGMRPDRYSYNTVIYAYGRKGQMKEA 694
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
R++ EMK GV P + Y+ I S ++A + ++ G RP + F+++ Q
Sbjct: 695 SRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQG 754
Query: 301 LRDEG 305
G
Sbjct: 755 YSRHG 759
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 142/323 (43%), Gaps = 34/323 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G L +N LI VFD ++ + PD+ ++ LL +GQ
Sbjct: 386 MVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGL 445
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ V++EMK G+ P+ +Y +I+++ +D+A+E+++ M P +
Sbjct: 446 DSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNA 505
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+++ L R +A + F + R +P+ +Y++++ AY + +++ + +++
Sbjct: 506 VLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAER 565
Query: 181 IGPN---TRTYDIVLHHLIKAGRTEEAYSVFKR------------MSRKPGTEPTVSTYE 225
I + +T +V + + TE+A+ +R M G V E
Sbjct: 566 IERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVE 625
Query: 226 IVVRMF----------CYNAQVDMAMRIWD---------EMKARGVLPVMHMYSTLINSL 266
V+ + YN+ + M R+ D E+K+ G+ P + Y+T+I +
Sbjct: 626 EVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAY 685
Query: 267 CHEDKLDDACKYFQEMLDIGIRP 289
+ ++ +A + F EM G++P
Sbjct: 686 GRKGQMKEASRLFSEMKCSGVKP 708
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 102/216 (47%), Gaps = 7/216 (3%)
Query: 14 NRLIDTLC----KSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYR 69
N L+ TL K ++ ++ F ++++RR DI ++ +G+ K + + EV
Sbjct: 570 NWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLS 629
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEK 129
M ++ +Y +++ + ++ + E++++ +P + + T+I G +
Sbjct: 630 LMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKG 689
Query: 130 RLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD 189
++ EA + F + K G +P+ TYN + +Y ++ +A ++ + G PN RT++
Sbjct: 690 QMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFN 749
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
+L + GR EA S +S P P +S E
Sbjct: 750 SILQGYSRHGRMVEAKSF---LSNLPKIYPGISKQE 782
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 66/131 (50%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N L+ + E+ + + ++K PD SY ++ +G++ + + ++ EMK
Sbjct: 643 YNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 702
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD+V+Y I I ++ + ++EA++L R + C+P+ F +++ G R+
Sbjct: 703 CSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMV 762
Query: 133 EALQFFGQSKK 143
EA F K
Sbjct: 763 EAKSFLSNLPK 773
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC-YNAQVDMA 240
P+ Y ++ +AGR +A +VF+RM G +P + TY +V + +
Sbjct: 181 APDASAYTALVSAFSRAGRFRDAVAVFQRMV-DGGVQPALVTYNVVFHAYSKMSVPWKEV 239
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD-DACKYFQEMLDIGIRPPGQLFSNLKQ 299
+ + D MK G+ + Y+TLI S C L +A + F EM G P F++L
Sbjct: 240 VALVDSMKEDGIERDRYTYNTLI-SCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLD 298
Query: 300 ALRDEGMEETAVVLAQKIDKLRKTPLV 326
E A+ + ++++ TP V
Sbjct: 299 VYGKARKHEEAIGVLKRMENAGCTPSV 325
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 147/319 (46%), Gaps = 5/319 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL FN L+ CK ++ A EV D M + PD+++YT L+ G +
Sbjct: 109 MKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGK 168
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM++ P VV+Y ++IN + EL EME KP+ +
Sbjct: 169 IDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNV 228
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++ E ++ A + ++ GF P+ T+N + YC + R+++A+RMMDEM + G
Sbjct: 229 VVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG 288
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N+ T + +LH L + ++AY + S++ VS +++ F
Sbjct: 289 LKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS---- 344
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
WDEMK + ++P + Y T+I LC K D + E+L+ G+ P ++ +
Sbjct: 345 -XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILG 403
Query: 301 LRDEGMEETAVVLAQKIDK 319
EG + A K+ K
Sbjct: 404 YCREGQVDKAFHFRNKMVK 422
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 35/349 (10%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
LPD + LI LCK ++ A + D+M+ + P + +Y +L+ G + + L E
Sbjct: 150 LPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFE 209
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+ EM+ G +P+ V+Y +++ + + D A R+ME + P F TL NG
Sbjct: 210 LIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYC 269
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMM------------- 173
RLSEA + + ++G + + T N ++ C +++DAY+++
Sbjct: 270 KAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEV 329
Query: 174 ------------------DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
DEM++ I P+ TY ++ L ++G+T+++ + +
Sbjct: 330 SYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNEL-LES 388
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
G P +TY ++ +C QVD A ++M + P + + L+ LC E LD A
Sbjct: 389 GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKA 448
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
K F+ + G F+ + L +EG E A L ++++ + P
Sbjct: 449 LKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGP 497
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 151/336 (44%), Gaps = 32/336 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M+ L + +N LI+ + + E+ D+M+ + P+ +Y ++++ + ++
Sbjct: 179 MENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGK 238
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R+M++ GF PD V++ + N +C A R EA + EM K + T
Sbjct: 239 MDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNT 298
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGF-------------------------------EPE 149
+++ L E++L +A + + KRG+ P
Sbjct: 299 ILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPS 358
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
TY ++G C S + + + +E+ + G+ P+ TY+ ++ + G+ ++A+
Sbjct: 359 IITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRN 418
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+M +K +P + T I+VR C +D A++++ ++G ++T+I+ LC E
Sbjct: 419 KMVKKS-FKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEE 477
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ ++A EM + + P + + AL D G
Sbjct: 478 GRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAG 513
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 4/291 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCK---SRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
M + LK L N LI L + V ++ +F + K + + ++ IL+ G
Sbjct: 1 MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ L + +MK PD VSY +++ C + +EA +L +M+ P+ +
Sbjct: 61 ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
F L++G L EA + + P+ TY ++G C +I++A+R+ DEM
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ P+ TY+++++ + + + + + M K G +P TY +VV+ + ++
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGK-GVKPNAVTYNVVVKWYVKEGKM 239
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
D A +M+ G P ++TL N C +L +A + EM G++
Sbjct: 240 DNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLK 290
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 105/239 (43%), Gaps = 39/239 (16%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GLK N ++ TLC R ++ A ++ KR + D SY L+ G+ +
Sbjct: 284 MSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK--- 340
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + + EMK+ P +++YG MI C + + D++++ E+ + P + T
Sbjct: 341 -VGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNT 399
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPE------------------------------- 149
+I G E ++ +A F + K+ F+P+
Sbjct: 400 IILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKG 459
Query: 150 ----APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
A T+N ++ C R +A+ ++ EM + +GP+ T++ +L L AGR +EA
Sbjct: 460 KAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEA 518
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 91/216 (42%), Gaps = 23/216 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + +N +I C+ V++A +KM K+ F PD+ + IL+ G + L
Sbjct: 389 GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKA 448
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++++ G D V++ +I+ C R++EA +L EME P + +++
Sbjct: 449 LKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSA 508
Query: 125 LGSEKRLSEALQFFGQSKKRG-----------------------FEPEAPTYNAVVGAYC 161
L R+ EA +F ++G +P + ++ + C
Sbjct: 509 LADAGRMKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELC 568
Query: 162 WSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIK 197
+ DA M+ E + GI + TY ++ LIK
Sbjct: 569 TQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIK 604
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 151/351 (43%), Gaps = 34/351 (9%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKM--------------------KKRR 40
M +G+K ++ + +ID LCK V+ A + KM KK R
Sbjct: 280 MKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGR 339
Query: 41 FD------------PDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMIN 88
D P+I Y+ + + N+L ++ ++EM + G PD Y I+I
Sbjct: 340 SDKAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIG 399
Query: 89 AHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEP 148
+C ++A + EM PS + LIN ++ A + G P
Sbjct: 400 GYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIP 459
Query: 149 EAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ T+N ++ + + A+ ++D MR G+ P+T TY+ ++H LI G EA +
Sbjct: 460 DVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDIL 519
Query: 209 KRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCH 268
+ R+ G P V T+ V+ F + A +W M R V P + S L+N C
Sbjct: 520 HELIRR-GLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCR 578
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVLAQKID 318
++D+A F +MLD G++P L++NL G M ++A ID
Sbjct: 579 ARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMID 629
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
++ F ++ + ++ + LCK ++ A + F +M + PD YTI++ G+ + +
Sbjct: 347 LNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGD 406
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM G P V +Y ++INA C + A L + M P F
Sbjct: 407 INKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNC 466
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+G G + L +A + + G P+ TYNA++ + N+A ++ E+ + G
Sbjct: 467 LIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRG 526
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ T+ V+ K G EEA+ V+ MS + +P V T ++ +C ++D A
Sbjct: 527 LSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERH-VKPDVVTCSALLNGYCRARRMDEA 585
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ +M G+ P + +Y+ LI+ C ++ AC M+D G P
Sbjct: 586 NALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLP 634
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 149/335 (44%), Gaps = 39/335 (11%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ L +S ++ A ++ + M+ + ++ +E + + N+ S ++ EMK+
Sbjct: 223 NSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKN 282
Query: 74 DGFEPDVVSYGIMINA-----------------------------------HCSAKRYDE 98
G + DV++Y I+I+A +C R D+
Sbjct: 283 YGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDK 342
Query: 99 AVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVG 158
A+ L + N +P+ ++ + + L + + EA + F + + G P+ Y ++G
Sbjct: 343 AINL---LNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIG 399
Query: 159 AYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTE 218
YC IN A++ + EM K GI P+ TY ++++ K+G A + +RM + G
Sbjct: 400 GYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLE-GLI 458
Query: 219 PTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKY 278
P V T+ ++ F + A + D M++ G+ P Y+ LI+SL ++A
Sbjct: 459 PDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDI 518
Query: 279 FQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
E++ G+ P F+++ +G E A ++
Sbjct: 519 LHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLV 553
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 1/224 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M KFG+ + + LI+ CKS + A+ + +M PD+ ++ L++G+G++
Sbjct: 417 MLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGY 476
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+ M+ G PD V+Y +I++ + +EA ++ E+ P F
Sbjct: 477 LQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTD 536
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I+G + EA + +R +P+ T +A++ YC + R+++A + +M G
Sbjct: 537 VIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAG 596
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+ P+ Y+ ++H AG A ++ M G P ++T+
Sbjct: 597 LKPDLVLYNNLIHGFCSAGNMNAACNLVAMMI-DDGFLPNITTH 639
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G+ + +N LI +L + A+++ ++ +R PD+ ++T +++G+ ++ N
Sbjct: 487 MRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGN 546
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
V+ M + +PDVV+ ++N +C A+R DEA LF +M KP ++
Sbjct: 547 FEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNN 606
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
LI+G S ++ A GF P T+ A
Sbjct: 607 LIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRA 641
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 99/225 (44%), Gaps = 6/225 (2%)
Query: 67 VYREMKDDGFEPDVVS--YGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+++ + D GF + Y ++++ + + + A+ L E++ N PS + +L+
Sbjct: 169 LFKLVYDTGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKA 228
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
L +L A + G A + + +YC I ++++ EM+ GI +
Sbjct: 229 LLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKAD 288
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
Y IV+ L K + A S+ +M G + V+ +C + D A+ +
Sbjct: 289 VIAYTIVIDALCKISCVKVATSLLFKMIH-CGISVDSVSVSSVIDGYCKKGRSDKAINLL 347
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ R P + +YS+ + LC + + +A K FQEM + G+ P
Sbjct: 348 NFFNVR---PNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYP 389
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 118/307 (38%), Gaps = 4/307 (1%)
Query: 4 FGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
FG K ++ L+D V A + ++K P + LL+ + L
Sbjct: 178 FGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDL 237
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLIN 123
++ M+ G + + I ++C+ ++ EM+ K + +I+
Sbjct: 238 AWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVID 297
Query: 124 GLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGP 183
L + A + G ++ + ++V+ YC R + A +++ + P
Sbjct: 298 ALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFN---VRP 354
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N Y + L K G EA F+ MS + G P Y I++ +C ++ A +
Sbjct: 355 NIFVYSSFMTKLCKDGNMLEASKTFQEMS-EFGLYPDCFCYTIIIGGYCKVGDINKAFQY 413
Query: 244 WDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRD 303
EM G+ P + Y+ LIN+ C + A Q M+ G+ P F+ L
Sbjct: 414 LGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGK 473
Query: 304 EGMEETA 310
+G + A
Sbjct: 474 KGYLQKA 480
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 149/302 (49%), Gaps = 2/302 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + N +I+ L K+ ++ A ++F +M+ R P + +Y +++ + K+
Sbjct: 293 MQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKS 352
Query: 61 LLS-MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
S + + MK+ G P +Y I+I+ C R ++A+ L EM+ P P +C
Sbjct: 353 RASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYC 412
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI+ LG KR A + F + K+ A Y ++ + R++DA M DEM K
Sbjct: 413 SLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL 472
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G P+ Y+ ++ L + G +EA S +RM ++ G P +++Y I++
Sbjct: 473 GCAPDVYAYNALMSGLARTGMLDEALSTMRRM-QEHGCIPDINSYNIILNGLAKTGGPHR 531
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQ 299
AM + MK V P + Y+T++ +L H ++A K +EM +G +S++ +
Sbjct: 532 AMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILE 591
Query: 300 AL 301
A+
Sbjct: 592 AI 593
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 159/356 (44%), Gaps = 37/356 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G++ + LI K A +F++M+ + PD+ +YT L+ G G+
Sbjct: 223 MKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGR 282
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM+ +G PD V MIN A R D+A++LF+EME C PS + T
Sbjct: 283 IDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNT 342
Query: 121 LINGL-GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+I L S+ R SE +F + K+ G P + TY+ ++ +C + R+ A +++EM +
Sbjct: 343 IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEK 402
Query: 180 GIGP-----------------------------------NTRTYDIVLHHLIKAGRTEEA 204
G P + R Y +++ HL KAGR ++A
Sbjct: 403 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDA 462
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
++F M+ K G P V Y ++ +D A+ M+ G +P ++ Y+ ++N
Sbjct: 463 INMFDEMN-KLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 521
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKL 320
L A + M +RP ++ + AL GM E A L ++++ L
Sbjct: 522 GLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTL 577
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 163/353 (46%), Gaps = 41/353 (11%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
EL D R+ L ++ V +A +F ++K R+ P ++Y ++ + ++++Y
Sbjct: 128 ELSDVVRM---LGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLY 184
Query: 69 REMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVEL------------------------- 102
EM +G PD V+Y +I+A C R D A++L
Sbjct: 185 NEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFK 244
Query: 103 ----------FREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
F EM C+P + LI GLG R+ EA FF + ++ G P+
Sbjct: 245 FNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVF 304
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKA-GRTEEAYSVFKRM 211
N ++ + R++DA ++ EM P+ TY+ ++ L ++ R E S F+RM
Sbjct: 305 MNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERM 364
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDK 271
++ G P+ TY I++ FC +++ AM + +EM +G P Y +LI++L +
Sbjct: 365 -KESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 423
Query: 272 LDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
D AC+ FQE+ + ++++ + + L G + A+ + +++KL P
Sbjct: 424 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAP 476
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 3/257 (1%)
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN-CKPSPHIFCTLINGLGSEKR 130
K +E D +Y +I+ ++Y E ++ +EM C +P ++ LG+ K
Sbjct: 82 KRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKM 141
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG-IGPNTRTYD 189
+ +A+ F Q K R +P A YN+++ + +++ +EM G P+T TY
Sbjct: 142 VRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYS 201
Query: 190 IVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKA 249
++ K GR + A + M ++ G +PT Y +++ +F A+ +++EM+
Sbjct: 202 ALISAFCKLGRRDSAIQLLNEM-KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRH 260
Query: 250 RGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEET 309
+ P + Y+ LI L ++D+A +F EM G RP +N+ L G +
Sbjct: 261 QYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDD 320
Query: 310 AVVLAQKIDKLRKTPLV 326
A+ L Q+++ LR P V
Sbjct: 321 AMKLFQEMETLRCIPSV 337
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 3/206 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MD+ G + LID L K++ + A E+F ++K+ + Y ++++ G+
Sbjct: 399 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 458
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L ++ EM G PDV +Y +++ DEA+ R M+ C P + +
Sbjct: 459 LDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNI 518
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL A++ K+ P+ +YN V+GA + +A ++M EM G
Sbjct: 519 ILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLG 578
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYS 206
+ TY +L + G+ + Y+
Sbjct: 579 FEYDLITYSSILEAI---GKVDHEYT 601
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 135 LQFF-GQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK---CGIGPNTRTYDI 190
+QFF +K+R +E + TY A++ + + ++M+ EM + C + P T D+
Sbjct: 74 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTP-TELSDV 132
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
V L A +A ++F ++ + +P Y ++ M + Q + ++++EM
Sbjct: 133 V-RMLGNAKMVRQAITIFYQIKTRK-CQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTE 190
Query: 251 G-VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
G P YS LI++ C + D A + EM +IG++P ++++ L
Sbjct: 191 GHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTML 238
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 149/308 (48%), Gaps = 4/308 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR---RFDPDIKSYTILLEGWGQ 57
M +FG + +N L+ LC + E A E+ M P++ +YT +++G +
Sbjct: 155 MPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCK 214
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ + V++ M D G P+ +Y +I+ + S ++ E V++ +EM +P I
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVI 274
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ L++ L R +EA F ++G +P Y ++ Y +++ + +D M
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMV 334
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ G+ P+ ++I+ + K +EA +F +M R+ P V Y ++ C +V
Sbjct: 335 RNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKM-RQQWLSPGVVNYGALIDALCKLGRV 393
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D A+ +++M GV P + ++S+L+ LC DK + A K F E+LD GIR F+ L
Sbjct: 394 DDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNIL 453
Query: 298 KQALRDEG 305
L EG
Sbjct: 454 MCNLCREG 461
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 142/305 (46%), Gaps = 1/305 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ + + L+D LCK+ A+ +FD + ++ P + Y ILL G+ +
Sbjct: 263 MSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGA 322
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L M+ M +G PD + IM NA+ DEA+ +F +M P +
Sbjct: 323 LSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGA 382
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI+ L R+ +A+ F Q G P+ ++++V C + A ++ E+ G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQG 442
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
I N ++I++ +L + GR EA + M R P V +Y +V C ++D A
Sbjct: 443 IRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVD-VRPDVISYNTLVDGHCLTGRIDEA 501
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
++ D M + G+ P Y+TL++ C ++DDA F+EML G+ P ++ +
Sbjct: 502 AKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHG 561
Query: 301 LRDEG 305
L G
Sbjct: 562 LFQIG 566
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 136/277 (49%), Gaps = 1/277 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +ID LCK++ V+RA+ VF M + P+ +YT L+ G+ + ++ +EM
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMS 264
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G +PD V Y ++++ C R EA +F + KP I+ L++G +E LS
Sbjct: 265 THGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALS 324
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
E F + G P+ +N + AY I++A + D+MR+ + P Y ++
Sbjct: 325 EMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALI 384
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
L K GR ++A F +M + G P + + +V C + + A +++ E+ +G+
Sbjct: 385 DALCKLGRVDDAVLKFNQMINE-GVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGI 443
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
++ L+ +LC E ++ +A + ML + +RP
Sbjct: 444 RLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRP 480
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 1/303 (0%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L + ++ LID LCK V+ A F++M PDI ++ L+ G
Sbjct: 373 LSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAE 432
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+++ E+ D G + + I++ C R EA L M + +P + TL++G
Sbjct: 433 KLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGH 492
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
R+ EA + G +P+ TYN ++ YC + RI+DAY + EM G+ P
Sbjct: 493 CLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGV 552
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TY+ +LH L + GR EA ++ M + + TY I++ C N VD A +++
Sbjct: 553 VTYNTILHGLFQIGRFCEAKELYLNMINNR-RKCDIYTYTIILNGLCRNNFVDEAFKMFQ 611
Query: 246 EMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ ++ + + + +I +L + +DA F + G+ P + + + + L EG
Sbjct: 612 SLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEG 671
Query: 306 MEE 308
E
Sbjct: 672 SLE 674
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 159/370 (42%), Gaps = 82/370 (22%)
Query: 13 FNRLIDTLCKSR---HVERAQEVFDKMKKR---RFDPDIKSYTILL-------------- 52
FNRL+ + ++R E +F++M + + P +YTIL+
Sbjct: 54 FNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFA 113
Query: 53 -------EGWGQQKNLL----------------SMNEVYREMKDDGFEPDVVSYGIMINA 89
GW ++ + + + R M + G +V+SY I++
Sbjct: 114 AFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKG 173
Query: 90 HCSAKRYDEAVELFREM-EATNCKPSPHI--FCTLINGLGSEKRLSEALQFFGQSKKRGF 146
C+ KR +EA+EL M + + +P++ + T+I+GL + + A F +G
Sbjct: 174 LCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGV 233
Query: 147 EPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYS 206
P TY ++ Y + + + +M+ EM G+ P+ Y ++L +L K GR EA +
Sbjct: 234 RPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARN 293
Query: 207 VFKRMSRKPGTEPTVSTYEIVVR-----------------------------------MF 231
+F + RK G +P V+ Y I++ +
Sbjct: 294 IFDSLIRK-GIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAY 352
Query: 232 CYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPG 291
A +D AM I+D+M+ + + P + Y LI++LC ++DDA F +M++ G+ P
Sbjct: 353 AKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDI 412
Query: 292 QLFSNLKQAL 301
+FS+L L
Sbjct: 413 FVFSSLVYGL 422
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 148/321 (46%), Gaps = 13/321 (4%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ ++ F+ L+ LC E+A+++F ++ + + + IL+ ++ ++
Sbjct: 407 GVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEA 466
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ M PDV+SY +++ HC R DEA +L M + KP + TL++G
Sbjct: 467 QRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHG 526
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAV------VGAYCWSMRINDAYRMMDEMRK 178
+R+ +A F + +G P TYN + +G +C + + M++ RK
Sbjct: 527 YCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKEL--YLNMINNRRK 584
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
C I TY I+L+ L + +EA+ +F+ + K + + T I++ + +
Sbjct: 585 CDI----YTYTIILNGLCRNNFVDEAFKMFQSLCSKD-LQLDIFTINIMIGALLKGGRKE 639
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
AM ++ + A G++P + Y + +L E L++ + F M + G P ++ + L
Sbjct: 640 DAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALV 699
Query: 299 QALRDEGMEETAVVLAQKIDK 319
+ L G A V K+D+
Sbjct: 700 RWLLHRGDIGRAGVYLSKLDE 720
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 1/240 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + ++ ++ +N L+D C + ++ A ++ D M PD +Y LL G+ + +
Sbjct: 473 MLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARR 532
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++REM G P VV+Y +++ R+ EA EL+ M K + +
Sbjct: 533 IDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTI 592
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
++NGL + EA + F + + + T N ++GA R DA + + G
Sbjct: 593 ILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYG 652
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ P+ TY ++ +LIK G EE +F M GT P +VR + + A
Sbjct: 653 LVPDVETYRLIAENLIKEGSLEELDELFSAMEEN-GTAPNSRMLNALVRWLLHRGDIGRA 711
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 90/214 (42%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GLK + +N L+ CK+R ++ A +F +M + P + +Y +L G Q
Sbjct: 508 MVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGR 567
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
E+Y M ++ + D+ +Y I++N C DEA ++F+ + + + +
Sbjct: 568 FCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINI 627
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+I L R +A+ F G P+ TY + + + + M + G
Sbjct: 628 MIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENG 687
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRK 214
PN+R + ++ L+ G A ++ K
Sbjct: 688 TAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEK 721
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/154 (18%), Positives = 65/154 (42%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K ++ + +++ LC++ V+ A ++F + + DI + I++ + +
Sbjct: 584 KCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMD 643
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
++ + G PDV +Y ++ +E ELF ME P+ + L+ L
Sbjct: 644 LFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLL 703
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAY 160
+ A + + ++ F EA T + ++ Y
Sbjct: 704 HRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIY 737
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 154/292 (52%), Gaps = 8/292 (2%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEV-FDK-MKKRRFD-PDIKSYTILLEGWGQ 57
+D F L+ + +N L+D LC+ +HV A+E+ F K + F + K + ++L GW +
Sbjct: 103 LDDFNLRDDTSFYN-LVDALCEHKHVVEAEELCFGKNVIAHGFSVSNTKIHNLILRGWSK 161
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
E + +M +G D+ SY I ++ C + + +AV+L++EM++ K
Sbjct: 162 LGWWGKCKEYWDKMDTEGVPKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRIKLDVVA 221
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ T+I +G+ + + ++ F + ++RG EP T+N ++ C R+ DAYRM+DEM
Sbjct: 222 YNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMP 281
Query: 178 KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
K G P++ +Y + L K E S+F RM R G P + TY +++R F +
Sbjct: 282 KKGCQPDSISYMCLFSRLEKPS---EILSLFGRMIRS-GVRPKMDTYVMLMRKFERWGFL 337
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ +W MK G P Y+ +I++L + LD A +Y +EM++ G+ P
Sbjct: 338 QPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 389
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 133/328 (40%), Gaps = 17/328 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKM-KKRRFDPDIKSYTILLEGWGQQKNLLS 63
G + FNR+ID L K E + ++M P+ ++ I+ + + +
Sbjct: 36 GFRHTTETFNRMIDILGKYFEFETCWALINRMIGNPESLPNHVTFRIVFKRYVTAHLVQE 95
Query: 64 MNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVEL-------FREMEATNCKPSPH 116
+ Y ++ D D Y +++A C K EA EL +N K
Sbjct: 96 AIDAYDKLDDFNLRDDTSFYN-LVDALCEHKHVVEAEELCFGKNVIAHGFSVSNTK---- 150
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
I ++ G + +++ + G + +Y+ + C S + A ++ EM
Sbjct: 151 IHNLILRGWSKLGWWGKCKEYWDKMDTEGVPKDLFSYSIYMDIMCKSGKPWKAVKLYKEM 210
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
+ I + Y+ V+ + + E VF+ M R+ G EP V+T+ ++++ C + +
Sbjct: 211 KSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREM-RERGCEPNVATHNTIIKLLCEDGR 269
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+ A R+ DEM +G P Y L + L +K + F M+ G+RP +
Sbjct: 270 MRDAYRMLDEMPKKGCQPDSISYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVM 326
Query: 297 LKQALRDEGMEETAVVLAQKIDKLRKTP 324
L + G + + + + + + TP
Sbjct: 327 LMRKFERWGFLQPVLYVWKTMKESGDTP 354
>gi|357166198|ref|XP_003580632.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Brachypodium distachyon]
Length = 644
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 145/318 (45%), Gaps = 4/318 (1%)
Query: 1 MDKFGLKQELPD--FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
M++ G+ +++P + +I LCK VF++M K + YT L++ G+
Sbjct: 306 MEEMGMGKDIPQHAYVLVIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKF 365
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
++ MK G E D ++YG+++N C + DEA+ FR + +
Sbjct: 366 GRENEAMLLFERMKASGLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFY 425
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+LI+G G + +A + F + K +GF P++ YN ++ + R++DA + M
Sbjct: 426 TSLIDGFGKAGMVDQAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRMED 485
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G TY I++ L K + EEA + M K G PT + + C + +
Sbjct: 486 DGCDQTVYTYTIIIDGLFKKHKNEEAIKFWNTMIDK-GITPTAAAFRTFANGLCLSGKFS 544
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A RI DE+ GV+P + +IN LC + ACK ++ G PG++ + +
Sbjct: 545 RACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQACKLADGIVQKGREIPGRVRTMMI 603
Query: 299 QALRDEGMEETAVVLAQK 316
ALR G + AV L
Sbjct: 604 TALRKAGNTDLAVKLVHS 621
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 141/288 (48%), Gaps = 9/288 (3%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKR-RFDPDIKSYTILLEGW---GQQKN 60
G++ +N L+D L + ++ A VFD M R PD+ SY IL++G+ G+ ++
Sbjct: 203 GVEPSRVTYNCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRAQD 262
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNC-KPSP-HIF 118
++ RE + PD V+Y ++ H S + + + LF+EME K P H +
Sbjct: 263 AMARLAHMREQAE--LSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGMGKDIPQHAY 320
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+I L E + E L F + K G+ +A Y A++ R N+A + + M+
Sbjct: 321 VLVIGALCKEGKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKFGRENEAMLLFERMKA 380
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
G+ + TY ++++ L + G+ +EA F+ K G Y ++ F VD
Sbjct: 381 SGLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEK-GIAVNAIFYTSLIDGFGKAGMVD 439
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
A +++EMK +G +P + Y+ LI+ L +LDDAC ++ M D G
Sbjct: 440 QAQELFEEMKVKGFVPDSYCYNVLIDGLAKAGRLDDACALYKRMEDDG 487
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 119/302 (39%), Gaps = 36/302 (11%)
Query: 11 PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYRE 70
P LI +L + + M+ +P +Y LL+G L + V+
Sbjct: 174 PSSASLIRSLAALGLADELLWAWSAMRLAGVEPSRVTYNCLLDGLANAGLLDTAINVFDA 233
Query: 71 MK-DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSE 128
M +D PDVVSY I+I +C A R +A+ M E P + TL+ SE
Sbjct: 234 MSTEDRVRPDVVSYNILIKGYCRAGRAQDAMARLAHMREQAELSPDKVTYLTLMQLHYSE 293
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
S+ ++ F + ++ G + P + Y
Sbjct: 294 GTFSQCIRLFQEMEEMGMGKDIPQH---------------------------------AY 320
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+V+ L K G+ E +VF+RM K G + Y ++ + + AM +++ MK
Sbjct: 321 VLVIGALCKEGKPFEGLAVFERM-LKSGYPAKAAMYTALIDTMGKFGRENEAMLLFERMK 379
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEE 308
A G+ Y ++N LC KLD+A F+ ++ GI +++L GM +
Sbjct: 380 ASGLELDAITYGVIVNCLCRFGKLDEAILCFRNCVEKGIAVNAIFYTSLIDGFGKAGMVD 439
Query: 309 TA 310
A
Sbjct: 440 QA 441
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 9/229 (3%)
Query: 97 DEAVELFREM----EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPT 152
D A +L E+ +A +P +LI L + E L + + G EP T
Sbjct: 151 DHARQLVAELRARGDAVLMHLTPPSSASLIRSLAALGLADELLWAWSAMRLAGVEPSRVT 210
Query: 153 YNAVVGAYCWSMRINDAYRMMDEMR-KCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRM 211
YN ++ + ++ A + D M + + P+ +Y+I++ +AGR ++A + M
Sbjct: 211 YNCLLDGLANAGLLDTAINVFDAMSTEDRVRPDVVSYNILIKGYCRAGRAQDAMARLAHM 270
Query: 212 SRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV---LPVMHMYSTLINSLCH 268
+ P TY ++++ +R++ EM+ G+ +P H Y +I +LC
Sbjct: 271 REQAELSPDKVTYLTLMQLHYSEGTFSQCIRLFQEMEEMGMGKDIP-QHAYVLVIGALCK 329
Query: 269 EDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
E K + F+ ML G +++ L + G E A++L +++
Sbjct: 330 EGKPFEGLAVFERMLKSGYPAKAAMYTALIDTMGKFGRENEAMLLFERM 378
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 150/337 (44%), Gaps = 14/337 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL ++ +N L+ C++ V+ A+ V D MK+ DP++ +YT + + + K
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ ++Y M +G DVV+ ++ C R+ EA LFREM+ P+ +CT
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT 314
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC- 179
LI+ L R E L G+ RG + TY A++ W + + D +R
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMD---WLGKQGKTDEVKDTLRFAL 371
Query: 180 --GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
+ PN TY +++ L KA +EA V M K P V T+ V+ F +
Sbjct: 372 SDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKS-ISPNVVTFSSVINGFVKRGLL 430
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
D A MK RG+ P + Y TLI+ D A + + +ML G++ + +L
Sbjct: 431 DKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSL 490
Query: 298 KQALRDEGMEETAVVL-------AQKIDKLRKTPLVD 327
LR G E A+ L +D + T L+D
Sbjct: 491 VNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 154/354 (43%), Gaps = 40/354 (11%)
Query: 3 KFGLKQELP----DFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQ 58
+F L L + LID LCK+ +V+ A++V +M+++ P++ +++ ++ G+ ++
Sbjct: 368 RFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKR 427
Query: 59 KNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIF 118
L E R MK+ G P+VV+YG +I+ + D A+E++ +M K + I
Sbjct: 428 GLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV 487
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFE------------------------------- 147
+L+NGL ++ EA+ F + G
Sbjct: 488 DSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547
Query: 148 ----PEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEE 203
P+A YN + C + +A + EMR G+ P+ TY+ ++ + G T +
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607
Query: 204 AYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLI 263
A + M + +P + TY +V V+ A + +EM + G P + ++
Sbjct: 608 ALKLLHEM-KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666
Query: 264 NSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
+ +LD + M++ G+ +++ L Q L GM A V+ +++
Sbjct: 667 QACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 1/289 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK G + LID+L K+ + + +M R D+ +YT L++ G+Q
Sbjct: 300 MDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGK 359
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + R D P+ V+Y ++I+A C A DEA ++ EME + P+ F +
Sbjct: 360 TDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSS 419
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+ING L +A ++ K+RG P TY ++ + + A + +M G
Sbjct: 420 VINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEG 479
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ N D +++ L + G+ EEA ++FK S G Y ++ + A
Sbjct: 480 VKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS-GSGLSLDHVNYTTLIDGLFKAGDMPTA 538
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+ E+ R +LP +Y+ IN LC K +A + EM ++G++P
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKP 587
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 6/280 (2%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
+K L +N L+ L + VE+A+ + ++M F P ++ +L+ Q + L +
Sbjct: 620 IKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVIL 679
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGL 125
+++ M + G D+ Y ++ C +A + EM + P F LI G
Sbjct: 680 DIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 126 GSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNT 185
L A + Q + P T+N ++G RI +A ++ EM K G+ PN
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 186 RTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWD 245
TYDI+ K EA ++ M K G P VSTY ++ F + A ++
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGK-GFVPKVSTYNALISDFTKAGMMTQAKELFK 858
Query: 246 EMKARGVLPVMHMYSTLINS---LCHEDKLDDACKYFQEM 282
+M+ RGV P Y L++ L E K + YF E+
Sbjct: 859 DMQKRGVHPTSCTYDILVSGWYDLAREQKSQNT--YFTEI 896
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 126/323 (39%), Gaps = 35/323 (10%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G+ + N L+ LC++ V+ A + D+ D+ + L+ G+ + +
Sbjct: 126 MCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIH-ALDVIGWNTLIAGYCRVGD 184
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ V M G DVV Y ++ C A + D A + M+ P+ +
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
I K + EA + + G + T +A+V C R ++AY + EM K G
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG 304
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFK------------------------------- 209
PN TY ++ L KAGR +E S+
Sbjct: 305 AAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVK 364
Query: 210 ---RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSL 266
R + P TY +++ C VD A ++ EM+ + + P + +S++IN
Sbjct: 365 DTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGF 424
Query: 267 CHEDKLDDACKYFQEMLDIGIRP 289
LD A +Y + M + GI P
Sbjct: 425 VKRGLLDKATEYKRMMKERGINP 447
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 139/374 (37%), Gaps = 71/374 (18%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GL + ++ LID L K+ + A + ++ R PD Y + +
Sbjct: 514 GLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEA 573
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
EM++ G +PD +Y MI +HC +A++L EM+ ++ KP+ + TL+ G
Sbjct: 574 KSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAG 633
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPT-------------------------------- 152
L + +A + GF P + T
Sbjct: 634 LFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHAD 693
Query: 153 ---YNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYD-IVLHH-------------- 194
YN ++ C+ A +++EM GI P+T T++ ++L H
Sbjct: 694 ITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYA 753
Query: 195 --------------------LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYN 234
L GR EA +V M K G EP TY+I+
Sbjct: 754 QMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM-EKSGLEPNNLTYDILATGHGKQ 812
Query: 235 AQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLF 294
+ AMR++ EM +G +P + Y+ LI+ + A + F++M G+ P +
Sbjct: 813 SNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTY 872
Query: 295 SNLKQALRDEGMEE 308
L D E+
Sbjct: 873 DILVSGWYDLAREQ 886
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL ++ +N L+ LC +A V ++M PD ++ L+ G + +
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L + Y +M P++ ++ ++ S R EA + EME + +P+ +
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
L G G + EA++ + + +GF P+ TYNA++ + + + A + +M+K G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVF 208
+ P + TYDI++ R +++ + +
Sbjct: 865 VHPTSCTYDILVSGWYDLAREQKSQNTY 892
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 153/316 (48%), Gaps = 2/316 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G+ +N + +LC+ V A ++ +M+ R PD+ SY+ ++ G+ Q L +
Sbjct: 248 GVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRV 307
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM+ G +P+ +Y +I C + EA + REM + P I+ TLI+G
Sbjct: 308 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 367
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
+S A + F + +KR P+ TY AV+ C + R+ +A ++ EM + P+
Sbjct: 368 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 427
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY ++ K G+ +EA+S+ +M + G P + TY + C +VD A +
Sbjct: 428 EVTYTALIDGYCKEGKMKEAFSLHNQMLQM-GLTPNIVTYTALADGLCKCGEVDTANELL 486
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRD 303
EM +G+ ++ Y++L+N LC +D A K ++M G P ++ L A +
Sbjct: 487 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 546
Query: 304 EGMEETAVVLAQKIDK 319
M +L Q +D+
Sbjct: 547 REMVRAHELLRQMLDR 562
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 1/293 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
GLK +N +I LCK+ V A+ V +M PD YT L++G+ + N+ S
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM+ PD ++Y +I C R EA +LF EM +P + LI+G
Sbjct: 378 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDG 437
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPN 184
E ++ EA Q + G P TY A+ C ++ A ++ EM + G+ N
Sbjct: 438 YCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 497
Query: 185 TRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIW 244
TY+ +++ L KAG ++A + K M G P TY ++ +C + ++ A +
Sbjct: 498 IYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556
Query: 245 DEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+M R + P + ++ L+N C L+D K + ML+ GI P +++L
Sbjct: 557 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 609
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 140/285 (49%), Gaps = 1/285 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LID CK +V A +FD+M+KR+ PD +YT ++ G Q ++ ++++ EM
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
EPD V+Y +I+ +C + EA L +M P+ + L +GL +
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVD 480
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
A + + ++G E TYN++V C + I+ A ++M +M G P+ TY ++
Sbjct: 481 TANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
K+ A+ + ++M + +PTV T+ +++ FC + ++ ++ M +G+
Sbjct: 541 DAYCKSREMVRAHELLRQMLDRE-LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
+P Y++LI C + + + ++ M G+ P G ++ L
Sbjct: 600 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 644
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 145/306 (47%), Gaps = 4/306 (1%)
Query: 6 LKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
L+ +PD ++ +I+ C+ ++R ++ ++M+ + P+ +Y ++ + +
Sbjct: 281 LRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVA 340
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
V REM +G PD V Y +I+ C A LF EM+ P + +I
Sbjct: 341 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 400
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
GL R+ EA + F + + EP+ TY A++ YC ++ +A+ + ++M + G+
Sbjct: 401 CGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLT 460
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
PN TY + L K G + A + M RK G E + TY +V C +D A++
Sbjct: 461 PNIVTYTALADGLCKCGEVDTANELLHEMCRK-GLELNIYTYNSLVNGLCKAGNIDQAVK 519
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ +M+ G P Y+TL+++ C ++ A + ++MLD ++P F+ L
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579
Query: 303 DEGMEE 308
GM E
Sbjct: 580 MSGMLE 585
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 139/279 (49%), Gaps = 4/279 (1%)
Query: 11 PDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEV 67
PDF +I LC++ V A ++F +M +R +PD +YT L++G+ ++ + +
Sbjct: 391 PDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSL 450
Query: 68 YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGS 127
+ +M G P++V+Y + + C D A EL EM + + + + +L+NGL
Sbjct: 451 HNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 510
Query: 128 EKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT 187
+ +A++ + GF P+A TY ++ AYC S + A+ ++ +M + P T
Sbjct: 511 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 570
Query: 188 YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEM 247
++++++ +G E+ + K M K G P +TY +++ +C + I+ M
Sbjct: 571 FNVLMNGFCMSGMLEDGEKLLKWMLEK-GIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629
Query: 248 KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIG 286
A+GV+P + Y+ LI C + +A ++M+ G
Sbjct: 630 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 137/299 (45%), Gaps = 2/299 (0%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN-EVYREM 71
F+ L ++ ++ A+++FDKM + S + + + + + + +V+ E
Sbjct: 185 FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEF 244
Query: 72 KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRL 131
+ G + SY I+ ++ C R EA +L +ME C P + T+ING L
Sbjct: 245 PEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGEL 304
Query: 132 SEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIV 191
L+ + + +G +P TYN V+ C + ++ +A R++ EM GI P+ Y +
Sbjct: 305 QRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 364
Query: 192 LHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARG 251
+ K G AY +F M ++ P TY V+ C +V A +++ EM +
Sbjct: 365 IDGFCKLGNVSSAYRLFDEMQKRK-ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 423
Query: 252 VLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ P Y+ LI+ C E K+ +A +ML +G+ P ++ L L G +TA
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 482
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + GL+ + +N L++ LCK+ ++++A ++ M+ F PD +YT L++ + + +
Sbjct: 489 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 548
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
++ +E+ R+M D +P VV++ +++N C + ++ +L + M P+ + +
Sbjct: 549 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 608
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI + + + +G P+ TYN ++ +C + + +A+ + +M G
Sbjct: 609 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+Y+ ++ K + EA +F++M R+ G Y I + ++++
Sbjct: 669 FNLTVSSYNALIKGFYKRKKFLEARELFEQM-RREGLVADREIYNIFADINYDEGKMELT 727
Query: 241 MRIWDE 246
+ + DE
Sbjct: 728 LELCDE 733
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 2/211 (0%)
Query: 115 PHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR-INDAYRMM 173
P +F L L EA + F + G + N + + I A ++
Sbjct: 182 PRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVF 241
Query: 174 DEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCY 233
E + G+ NT +Y+I+ H L + GR EA+ + +M + G P V +Y V+ +C
Sbjct: 242 VEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELR-GCIPDVISYSTVINGYCQ 300
Query: 234 NAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL 293
++ +++ +EM+ +G+ P + Y+ +I LC K+ +A + +EM+ GI P G +
Sbjct: 301 VGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVI 360
Query: 294 FSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
++ L G +A L ++ K + +P
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 391
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 138/283 (48%), Gaps = 1/283 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G + + N L+ LC++ +A + +M++ PD+ SY ++ G+ + K
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L E+ EMK G +V++GI+I+A C A + DEA+ +EM+ + ++ +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
LI G L F + +RG P A TYN ++ +C ++ +A + + M + G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 181 IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMA 240
+ PN TY ++ L G+T+EA + M K EP TY I++ C + V A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD-EEPNAVTYNIIINKLCKDGLVADA 371
Query: 241 MRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
+ I + MK R P Y+ L+ LC + LD+A K ML
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 12/319 (3%)
Query: 7 KQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLS 63
K E P+ +N +I+ LCK V A E+ + MKKRR PD +Y ILL G + +L
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 64 MNEV-YREMKDDGF-EPDVVSYGIMINAHCSAKRYDEAVELFR---EMEATNCKPSPHIF 118
+++ Y +KD + +PDV+SY +I+ C R +A++++ E + + +I
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI- 464
Query: 119 CTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
L+N +++A++ + Q + TY A++ +C + +N A ++ +MR
Sbjct: 465 --LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVD 238
+ P+ Y+ +L L K G ++A+ +F+ M R P V ++ I++ +
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR-DNNFPDVVSFNIMIDGSLKAGDIK 581
Query: 239 MAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLK 298
A + M G+ P + YS LIN LD+A +F +M+D G P + ++
Sbjct: 582 SAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Query: 299 QALRDEGMEETAVVLAQKI 317
+ +G + L +K+
Sbjct: 642 KYCISQGETDKLTELVKKL 660
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 144/318 (45%), Gaps = 36/318 (11%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M GL+ +L + LI C ++R + +FD++ +R P +Y L+ G+ +
Sbjct: 238 MKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ 297
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
L +E++ M + G P+V +Y +I+ C + EA++L M + +P+ +
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 121 LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG 180
+IN L + +++A++ KKR P+ TYN ++G C +++A +++ M K
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 181 --IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVS---------------- 222
P+ +Y+ ++H L K R +A ++ + K G V+
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 223 ------------------TYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
TY ++ FC +++A + +M+ + P + Y+ L++
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLS 537
Query: 265 SLCHEDKLDDACKYFQEM 282
SLC E LD A + F+EM
Sbjct: 538 SLCKEGSLDQAWRLFEEM 555
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 1/311 (0%)
Query: 14 NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKD 73
N L+ L +SR+ E A + KM + + S + LLE + Q + V M
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 74 DGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSE 133
GF +V ++ I++ C +AV L REM + P + T+I G K L +
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 134 ALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLH 193
AL+ + K G T+ ++ A+C + ++++A + EM+ G+ + Y ++
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 194 HLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVL 253
G + ++F + + G P TY ++R FC Q+ A I++ M RGV
Sbjct: 256 GFCDCGELDRGKALFDEVLER-GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR 314
Query: 254 PVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVL 313
P ++ Y+ LI+ LC K +A + M++ P ++ + L +G+ AV +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 314 AQKIDKLRKTP 324
+ + K R P
Sbjct: 375 VELMKKRRTRP 385
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 124/276 (44%), Gaps = 1/276 (0%)
Query: 9 ELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVY 68
++ +N LI LCK + +A +++D + ++ D + ILL + ++ E++
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 69 REMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSE 128
+++ D + +Y MI+ C + A L +M + +PS + L++ L E
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 129 KRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTY 188
L +A + F + ++ P+ ++N ++ + I A ++ M + G+ P+ TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 189 DIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMK 248
+++ +K G +EA S F +M G EP + V++ + D + ++
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMV-DSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
Query: 249 ARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
+ ++ + T+++ +C+ D K + D
Sbjct: 662 DKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTD 697
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 60/112 (53%)
Query: 6 LKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMN 65
L+ + D+N L+ +LCK +++A +F++M++ PD+ S+ I+++G + ++ S
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 66 EVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ M G PD+ +Y +IN DEA+ F +M + +P HI
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHI 636
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 149/301 (49%), Gaps = 5/301 (1%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
D +Q PD ++ L+ L K ++ A ++ D+M + R PD+ Y LL G +
Sbjct: 181 FDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFK 240
Query: 58 QKNLLSMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPH 116
+ V+ ++ KD G P++ +Y +M++ C R+ E E++ M A N +P
Sbjct: 241 AGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVI 300
Query: 117 IFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM 176
+ LI+GL + A + + + K G +A YN++V +C + R+ +A++ D
Sbjct: 301 TYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSA 360
Query: 177 RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
G+ N RTY+I++ L +G +EA ++ + + P T+ ++ C N
Sbjct: 361 GFAGL-RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGF 419
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
+ A I++E + G + YS++IN LC+ +L DA K +++M G +P +++
Sbjct: 420 ANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNA 479
Query: 297 L 297
L
Sbjct: 480 L 480
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 3/299 (1%)
Query: 10 LPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
+PD F LI LC++ +A +F++ + D+ SY+ ++ G L+ +
Sbjct: 401 IPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVK 460
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
VY +M DG +P+ Y +I+ C R +AV ++ +M C P+ + TLI+GL
Sbjct: 461 VYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLC 520
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ EA + + GF P+ TY +++ +I+DA + ++ G+ +
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVM 580
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
++I++H L AG+ +EA VF M K P + TY ++ +D A +W
Sbjct: 581 MHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTS 640
Query: 247 MKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+ G+ P + Y+T I LC D++ + + E+L GI P ++ L +A+ G
Sbjct: 641 ITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 159/317 (50%), Gaps = 4/317 (1%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K GL + +N L+ C++ V+ A + +D ++++Y I+++G +
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVD 385
Query: 63 SMNEVYREM-KDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
E++ + KD PD V++G +I+ C ++A +F E + + + ++
Sbjct: 386 EAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSM 445
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
INGL + RL +A++ + + K G +P + YNA++ +C R +DA R+ +M G
Sbjct: 446 INGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGC 505
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
P TY+ ++ L KA + +EA SV + M G P ++TY ++R + ++D A+
Sbjct: 506 SPTVITYNTLIDGLCKAEKYQEASSVAREMVEN-GFTPDITTYGSLIRGLFSDKKIDDAL 564
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQL-FSNLKQA 300
IW ++ +G+ + M++ LI+ LC K+D+A F +M + PP + ++ L
Sbjct: 565 SIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDG 624
Query: 301 LRDEGMEETAVVLAQKI 317
L + G + A L I
Sbjct: 625 LYETGYIDKAATLWTSI 641
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 154/355 (43%), Gaps = 36/355 (10%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + L +N ++D LCK + EV+++M PD+ +Y IL+ G + ++
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGA 318
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRY---------------------------- 96
VY E+ G D Y ++ C A R
Sbjct: 319 ARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGL 378
Query: 97 ------DEAVELFREMEA-TNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPE 149
DEA+EL+ +E C P F TLI+GL ++A F +++ G + +
Sbjct: 379 FDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLD 438
Query: 150 APTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFK 209
+Y++++ C R+ DA ++ ++M K G PN+ Y+ ++ + RT +A ++
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498
Query: 210 RMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHE 269
+M+ G PTV TY ++ C + A + EM G P + Y +LI L +
Sbjct: 499 KMADN-GCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSD 557
Query: 270 DKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
K+DDA ++++L G++ + + L L G + A+ + + + + P
Sbjct: 558 KKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCP 612
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 139/263 (52%), Gaps = 2/263 (0%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++ ++ +I+ LC + A +V++KM K P+ Y L+ G+ Q
Sbjct: 434 GKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDA 493
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+Y +M D+G P V++Y +I+ C A++Y EA + REM P + +LI G
Sbjct: 494 VRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRG 553
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-KCGIGP 183
L S+K++ +AL + Q +G + + +N ++ C + ++++A + +M+ K P
Sbjct: 554 LFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPP 613
Query: 184 NTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRI 243
N TY+ ++ L + G ++A +++ ++ G EP + +Y ++ C ++ +++
Sbjct: 614 NLVTYNTLMDGLYETGYIDKAATLWTSITED-GLEPDIISYNTRIKGLCSCDRIHEGIQL 672
Query: 244 WDEMKARGVLPVMHMYSTLINSL 266
DE+ +RG++P + ++ L+ ++
Sbjct: 673 LDEVLSRGIIPTVITWNILVRAV 695
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 36/235 (15%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
MDK G K +N LI C+ A ++ KM P + +Y L++G + +
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524
Query: 61 LLSMNEVYREMKDDGFEPDVVSYG-----------------------------------I 85
+ V REM ++GF PD+ +YG I
Sbjct: 525 YQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNI 584
Query: 86 MINAHCSAKRYDEAVELFREM-EATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
+I+ CSA + DEA+ +F +M E NC P+ + TL++GL + +A + +
Sbjct: 585 LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITED 644
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAG 199
G EP+ +YN + C RI++ +++DE+ GI P T++I++ +IK G
Sbjct: 645 GLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 110/240 (45%), Gaps = 4/240 (1%)
Query: 75 GFEPDVVSYGIMINAHCSAKRYDEAVELFREME----ATNCKPSPHIFCTLINGLGSEKR 130
G P + S+ +++A A+R+ +A F + P+ + ++ L +
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173
Query: 131 LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDI 190
L A+ F ++R P+ TY+ ++ R++ A ++DEM + + P+ Y+
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233
Query: 191 VLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKAR 250
+L KAG E+ V+ ++ + PG P ++TY +++ C + +W+ M A
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293
Query: 251 GVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETA 310
+ P + Y LI+ LC +D A + + E++ G+ ++++L + G + A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 166/341 (48%), Gaps = 19/341 (5%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M + G + + ++I LC+++ VE++ +F +MK+ +PD+ +YTIL++ + +
Sbjct: 443 MMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGL 502
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ + EM+ G P+VV+Y +++A+ +K+ +A ++F M C P+ +
Sbjct: 503 IEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSA 562
Query: 121 LINGLGSEKRLSEALQ----------------FFGQSKKRGFEPEAPTYNAVVGAYCWSM 164
LI+GL + +A + +F + P TY A++ C +
Sbjct: 563 LIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQ 622
Query: 165 RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTY 224
+++DA+ ++D M G PN YD ++ K G+ + A VF RM+ K G P+V TY
Sbjct: 623 KVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMT-KCGYLPSVHTY 681
Query: 225 -EIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEML 283
++ RMF + ++D+AM++ EM P + Y+ +I+ L +++ A M
Sbjct: 682 TSLIDRMF-KDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLME 740
Query: 284 DIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
+ G P ++ L L G + ++ L ++++ P
Sbjct: 741 EKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAP 781
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 154/336 (45%), Gaps = 20/336 (5%)
Query: 7 KQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNE 66
K +F+R LC E+A ++ +M ++ F PD +YT ++ Q K +
Sbjct: 417 KVNTANFSR---CLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL 473
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
+++EMK G PDV +Y I+I++ C A ++A F EM + C P+ + L++
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEM---------- 176
K+L +A F + P A TY+A++ C + I A + +++
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESD 593
Query: 177 ------RKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRM 230
C I PN TY ++ L KA + +A+ + M G EP Y+ ++
Sbjct: 594 FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAM-LAAGCEPNQIVYDALIDG 652
Query: 231 FCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
FC ++D A ++ M G LP +H Y++LI+ + + +LD A K EML+ P
Sbjct: 653 FCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPN 712
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
++ + L G E A+ L +++ +P V
Sbjct: 713 VVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNV 748
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 136/298 (45%), Gaps = 35/298 (11%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
++ LID CK ++ AQEVF +M K + P + +YT L++ + L +V EM
Sbjct: 646 YDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML 705
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
+D P+VV+Y MI+ ++A+ L ME C P+ + LI+GLG +
Sbjct: 706 NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKAD 765
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR-----------KCGI 181
+L+ F Q +G P TY ++ C + +++A+ ++DEM+ C +
Sbjct: 766 ASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAV 825
Query: 182 G----------------------PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEP 219
P Y +++ KAGR E A + K + +
Sbjct: 826 QGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLN 885
Query: 220 TVST--YEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
ST Y +++ C +QV+ A ++ EM +G++P + ++ +L+ L +K D+A
Sbjct: 886 MTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEA 943
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 152/326 (46%), Gaps = 6/326 (1%)
Query: 2 DKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNL 61
D + + + LID LCK++ V A E+ D M +P+ Y L++G+ + +
Sbjct: 600 DTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKI 659
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
+ EV+ M G+ P V +Y +I+ R D A+++ EM +C P+ + +
Sbjct: 660 DNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAM 719
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL + +AL +++G P TY A++ + + + + ++ +M G
Sbjct: 720 IDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGC 779
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY ++++H AG +EA+ + M + + Y V+ F + + ++
Sbjct: 780 APNYVTYRVLINHCCAAGLLDEAHLLLDEM-KHTHWPKHLQGYHCAVQGF--SKKFIASL 836
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR---PPGQLFSNLK 298
+ +EM++ +P+ +Y LI+S +L+ A + +E++++ ++++L
Sbjct: 837 GLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLI 896
Query: 299 QALRDEGMEETAVVLAQKIDKLRKTP 324
QAL E A L ++ + P
Sbjct: 897 QALCLASQVEEAFTLYTEMTRKGIVP 922
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 135/344 (39%), Gaps = 51/344 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPD---IKSYTILLEGWGQ 57
+ FG + +N L+ L + VE V +M F D I + L G+
Sbjct: 195 LKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGR 254
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ L+M E K+D F D V MI+ A ++EA+ M +C P+
Sbjct: 255 WADALNMLE-----KED-FNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVT 308
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TL++G +K+ + G P +N++V YC + AY++ + M
Sbjct: 309 YRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMT 368
Query: 178 KCGIGPNTRTYDIVLHH-----------------------------------------LI 196
CG P Y+I + L
Sbjct: 369 TCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLC 428
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
G+ E+A+ + K M RK G P STY V+ C +V+ + ++ EMK GV P +
Sbjct: 429 GVGKFEKAFQILKEMMRK-GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDV 487
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA 300
+ Y+ LI+S C ++ A +F EM +G P ++ L A
Sbjct: 488 YTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHA 531
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 98/250 (39%), Gaps = 5/250 (2%)
Query: 48 YTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREME 107
Y L E G + + + RE+ +D E +++ C +DEA+E ++
Sbjct: 137 YDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLK 196
Query: 108 ATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRIN 167
+PS + L+ L S ++ + + GF + T A C R
Sbjct: 197 DFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWA 256
Query: 168 DAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIV 227
DA M++ K +T ++ L++A EA S RM R P V TY +
Sbjct: 257 DALNMLE---KEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRM-RCNSCIPNVVTYRTL 312
Query: 228 VRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ F Q RI + M G P ++++L++ C+ A K F M G
Sbjct: 313 LSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCG- 371
Query: 288 RPPGQLFSNL 297
PPG + N+
Sbjct: 372 SPPGYVAYNI 381
>gi|297820986|ref|XP_002878376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324214|gb|EFH54635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 498
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 164/323 (50%), Gaps = 14/323 (4%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
KFG+ + FN L+ C R ++ A+ +F+K+ R F PD+K+ ILL G+ + ++
Sbjct: 173 KFGVDE----FNILLRAFCTEREMKEARSIFEKLHSR-FKPDVKTMNILLLGFKEAGDIT 227
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ Y EM GF+P+ V+YGI I+ C + + EA+ LF +M+ + + I TLI
Sbjct: 228 ATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRQDIYITVQILTTLI 287
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIG 182
+G G + +A Q F + KRG P+ YNA++ + ++DA ++M EM + I
Sbjct: 288 HGSGVVRNKIKARQLFDEIPKRGLTPDCGAYNALMSSLMKCGDVSDAIKVMKEMEEKEIE 347
Query: 183 PNTRTYDIVLHHLIKAGR-----TEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQV 237
P++ T+ + ++K+ E Y K S P T PTV +++++FC N +V
Sbjct: 348 PDSVTFHSMFIGMMKSKEFGFSGVCEYYQKMKERSLVPKT-PTVV---MLMKLFCQNGEV 403
Query: 238 DMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL 297
++ + +W M +G P H L +LC + +DA + ++ ++ G ++ L
Sbjct: 404 NLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSRQTVERGRCVSEPVYRML 463
Query: 298 KQALRDEGMEETAVVLAQKIDKL 320
+ +L + L KI KL
Sbjct: 464 ETSLSSNNELKKLEELKGKIQKL 486
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 92/207 (44%), Gaps = 2/207 (0%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G K + ID CK R+ A +F+ M ++ ++ T L+ G G +N
Sbjct: 236 MVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRQDIYITVQILTTLIHGSGVVRN 295
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCT 120
+ +++ E+ G PD +Y ++++ +A+++ +EME +P F +
Sbjct: 296 KIKARQLFDEIPKRGLTPDCGAYNALMSSLMKCGDVSDAIKVMKEMEEKEIEPDSVTFHS 355
Query: 121 LINGLGSEKR--LSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRK 178
+ G+ K S +++ + K+R P+ PT ++ +C + +N + M +
Sbjct: 356 MFIGMMKSKEFGFSGVCEYYQKMKERSLVPKTPTVVMLMKLFCQNGEVNLGLDLWKYMLE 415
Query: 179 CGIGPNTRTYDIVLHHLIKAGRTEEAY 205
G P+ +++ L R +A+
Sbjct: 416 KGYCPHGHALELLTTALCARRRANDAF 442
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 146/291 (50%), Gaps = 13/291 (4%)
Query: 1 MDKFGLKQELPD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQ 57
+++ LK PD +N L+D L K V+ A+ V + K P++ +Y L++G+ +
Sbjct: 261 LNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK 320
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
V+ + G PDV SY IMIN C KR +EA+ L++EM N P+
Sbjct: 321 H--------VFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVT 372
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ +LI+GL R+S A + RG TYN+++ C + +++ A ++++M+
Sbjct: 373 YNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMK 432
Query: 178 KCGIGPNTRTYDIVLHHLI-KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
GI P+ T +I+LH L+ K R + A +F+ + K G P V TY I++ C
Sbjct: 433 DQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDK-GYHPNVYTYNIIIYGHCKEGL 491
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+D A + +M+ G P + +I +L + + D A K EM+ G+
Sbjct: 492 LDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 155/344 (45%), Gaps = 35/344 (10%)
Query: 6 LKQELPDF---NRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQK 59
LK PDF N LI+ C + A V K+ K + PD + T L++G GQ K
Sbjct: 91 LKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVK 150
Query: 60 NLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFC 119
L ++ ++ GF D VSYG +IN C A++L R ++ +P+ ++
Sbjct: 151 KALHFHD---KLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYN 207
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
T+I+ L K +SEA F + +G TY+A++ +C ++ +A ++EM
Sbjct: 208 TIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLK 267
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSR---KP--------------------- 215
I P+ Y+ ++ L K G+ +EA +V + + KP
Sbjct: 268 AINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVG 327
Query: 216 --GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLD 273
G P V +Y I++ C +V+ A+ ++ EM + ++P Y++LI+ LC ++
Sbjct: 328 LMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRIS 387
Query: 274 DACKYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKI 317
A EM D G +++L L G + A+ L K+
Sbjct: 388 YAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKM 431
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 156/348 (44%), Gaps = 29/348 (8%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + + + LI+ +CK A ++ ++ R +P++ Y +++ ++K +
Sbjct: 163 GFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEA 222
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
++ EM G +VV+Y +I+ C + EA+ EM P +I+ TL++
Sbjct: 223 CNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDA 282
Query: 125 LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC----------------WSM---- 164
L E ++ EA K +P TYN ++ Y WS
Sbjct: 283 LHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMI 342
Query: 165 -------RINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
R+ +A + EM + + PNT TY+ ++ L K+GR A+ + M + G
Sbjct: 343 NRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDR-GH 401
Query: 218 EPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINS-LCHEDKLDDAC 276
V TY ++ C N Q+D A+ + ++MK +G+ P M+ + L++ LC +L +A
Sbjct: 402 HANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQ 461
Query: 277 KYFQEMLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTP 324
FQ++LD G P ++ + EG+ + A L K++ +P
Sbjct: 462 GLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSP 509
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 142/330 (43%), Gaps = 28/330 (8%)
Query: 3 KFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLL 62
K+G + + LI LC V++A DK+ + F D SY L+ G +
Sbjct: 126 KWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETR 185
Query: 63 SMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLI 122
+ ++ R + EP+VV Y +I+ C K EA LF EM + + +I
Sbjct: 186 AAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAII 245
Query: 123 NGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC--- 179
+G +L+EAL F + + P+ YN +V A ++ +A ++ + K
Sbjct: 246 HGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLK 305
Query: 180 ------------------------GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKP 215
G+ P+ +Y+I+++ L K R EEA +++K M +K
Sbjct: 306 PNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQK- 364
Query: 216 GTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDA 275
P TY ++ C + ++ A + DEM RG + Y++LIN LC +LD A
Sbjct: 365 NMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKA 424
Query: 276 CKYFQEMLDIGIRPPGQLFSNLKQALRDEG 305
+M D GI+P + L L +G
Sbjct: 425 IALINKMKDQGIQPDMYTLNILLHGLLCKG 454
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 147/326 (45%), Gaps = 29/326 (8%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+N +ID LCK + V A +F +M + ++ +Y+ ++ G+ L EM
Sbjct: 206 YNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMV 265
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING-------- 124
PDV Y +++A + EA + + T KP+ + TLI+G
Sbjct: 266 LKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNA 325
Query: 125 -------------------LGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMR 165
L KR+ EAL + + ++ P TYN+++ C S R
Sbjct: 326 VGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGR 385
Query: 166 INDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYE 225
I+ A+ ++DEM G N TY+ +++ L K G+ ++A ++ +M + G +P + T
Sbjct: 386 ISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKM-KDQGIQPDMYTLN 444
Query: 226 IVVR-MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLD 284
I++ + C ++ A ++ ++ +G P ++ Y+ +I C E LD+A +M D
Sbjct: 445 ILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMED 504
Query: 285 IGIRPPGQLFSNLKQALRDEGMEETA 310
G P F + AL ++G + A
Sbjct: 505 SGCSPNAITFKIIICALLEKGETDKA 530
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 123/265 (46%), Gaps = 1/265 (0%)
Query: 25 HVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDGFEPDVVSYG 84
+V+ A F +M R P I + +L+ + + K+ ++ + R ++ +PD +
Sbjct: 43 NVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLN 102
Query: 85 IMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKR 144
I+IN C + + A + ++ +P TLI GL + ++ +AL F + +
Sbjct: 103 ILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQ 162
Query: 145 GFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
GF + +Y ++ C A +++ + PN Y+ ++ L K EA
Sbjct: 163 GFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEA 222
Query: 205 YSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLIN 264
++F MS K G V TY ++ FC ++ A+ +EM + + P +++Y+TL++
Sbjct: 223 CNLFSEMSVK-GISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVD 281
Query: 265 SLCHEDKLDDACKYFQEMLDIGIRP 289
+L E K+ +A ++ ++P
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKP 306
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 104/259 (40%), Gaps = 37/259 (14%)
Query: 92 SAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAP 151
S + D+A+ F M P F +++ K + + + + +P+
Sbjct: 40 SFENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFF 99
Query: 152 TYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRT------------------------ 187
T N ++ +C +IN A+ ++ ++ K G P+T T
Sbjct: 100 TLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKL 159
Query: 188 -----------YDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQ 236
Y +++ + K G T A + +R+ + TEP V Y ++ C
Sbjct: 160 LAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRL-TEPNVVMYNTIIDCLCKRKL 218
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
V A ++ EM +G+ + YS +I+ C KL +A + EM+ I P +++
Sbjct: 219 VSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNT 278
Query: 297 LKQALRDEG-MEETAVVLA 314
L AL EG ++E VLA
Sbjct: 279 LVDALHKEGKVKEAKNVLA 297
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Query: 183 PNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMR 242
P ++ +L K S+ +R+ K +P T I++ FC+ Q+++A
Sbjct: 61 PPIIQFNKILDSFAKMKHYPTVVSLSRRLELK-AIQPDFFTLNILINCFCHLGQINLAFS 119
Query: 243 IWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALR 302
+ ++ G P +TLI LC + ++ A + ++L G R + L +
Sbjct: 120 VLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVC 179
Query: 303 DEGMEETAVVLAQKID 318
G A+ L ++ID
Sbjct: 180 KIGETRAAIQLLRRID 195
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 151/317 (47%), Gaps = 17/317 (5%)
Query: 5 GLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSM 64
G + ++++I LC++ VE+A +F +MK +PD+ +YTIL++ + + +
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA 342
Query: 65 NEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLING 124
+ EM+ G +VV+Y +++A+ AK+ +A ++F M C P+ + L++G
Sbjct: 343 RSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDG 402
Query: 125 LGSEKRLSEALQFF----GQSKKRG----FE--------PEAPTYNAVVGAYCWSMRIND 168
L + +A + + G S G FE P TY A++ C + ++ D
Sbjct: 403 LCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVD 462
Query: 169 AYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVV 228
A ++D M G PN YD ++ K G+ + A VF RMS K G PTV TY ++
Sbjct: 463 AQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS-KCGYLPTVHTYTSLI 521
Query: 229 RMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR 288
+ ++D+AM++ +M P + Y+ +I+ LC + A K M + G
Sbjct: 522 DAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCS 581
Query: 289 PPGQLFSNLKQALRDEG 305
P ++ L L G
Sbjct: 582 PNVVTYTALIDGLGKSG 598
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 158/315 (50%), Gaps = 6/315 (1%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ LID LCK+ V AQE+ D M +P+ Y L++G+ + + + EV+ M
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS 506
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G+ P V +Y +I+A +R D A+++ +M ++C P+ + +I+GL
Sbjct: 507 KCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQ 566
Query: 133 EALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVL 192
+AL+ +++G P TY A++ S +++ + ++ +M G PN TY +++
Sbjct: 567 KALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLI 626
Query: 193 HHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGV 252
+H AG +EA+S+ M ++ + Y VV+ F + + ++ + +E+++ G
Sbjct: 627 NHCCAAGLLDEAHSLLSEM-KQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEELESHGT 683
Query: 253 LPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIR---PPGQLFSNLKQALRDEGMEET 309
+P+ +Y LI++ +L++A + +EM+++ ++++L QAL E
Sbjct: 684 VPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEK 743
Query: 310 AVVLAQKIDKLRKTP 324
A L +I + P
Sbjct: 744 AFELYSEITRKGVVP 758
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 147/344 (42%), Gaps = 41/344 (11%)
Query: 20 LCKSRHVERAQEVFDKMKKRRFDPDIKSY----TILLEGWGQQKNLLSMNEVYREMKDDG 75
LC + A ++ M + F PD +Y T L E +K L +++EMK G
Sbjct: 263 LCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFL----LFQEMKSVG 318
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
PDV +Y I+I++ C A ++A F EM + C + + L++ K+L +A
Sbjct: 319 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQAS 378
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCG--------------- 180
F + G P TY+A+V C + I A + ++
Sbjct: 379 DIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTD 438
Query: 181 -IGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
I PN TY ++ L KA + +A + M G EP Y+ ++ FC ++D
Sbjct: 439 SIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSN-GCEPNHIIYDALIDGFCKVGKIDN 497
Query: 240 AMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNL-- 297
A ++ M G LP +H Y++LI+++ + +LD A K +M++ P ++ +
Sbjct: 498 AQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMID 557
Query: 298 --------KQALR------DEGMEETAVVLAQKIDKLRKTPLVD 327
++AL+ ++G V ID L K+ VD
Sbjct: 558 GLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVD 601
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 133/336 (39%), Gaps = 23/336 (6%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEG--WGQQ---KNLLSMNE- 66
FN L+ + C +R A ++ +M P +Y I + G++ +LL++ E
Sbjct: 180 FNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEK 239
Query: 67 VYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLG 126
VY EM + V+ C ++D A ++ + M P + +I L
Sbjct: 240 VYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLC 299
Query: 127 SEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTR 186
++ +A F + K G P+ TY ++ ++C + I A DEMR G N
Sbjct: 300 EAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVV 359
Query: 187 TYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDE 246
TY +LH +KA + +A +F RM G P TY +V C ++ A ++ +
Sbjct: 360 TYTALLHAYLKAKQLPQASDIFNRM-IDAGCPPNTITYSALVDGLCKAGEIQKACEVYTK 418
Query: 247 M----------------KARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPP 290
+ + P + Y LI+ LC K+ DA + ML G P
Sbjct: 419 LIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPN 478
Query: 291 GQLFSNLKQALRDEGMEETAVVLAQKIDKLRKTPLV 326
++ L G + A + ++ K P V
Sbjct: 479 HIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTV 514
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 146/363 (40%), Gaps = 52/363 (14%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPD---IKSYTILLEGWGQ 57
+ FG + +N L+ L + ++ V +M + F D + + L G+
Sbjct: 31 LKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGR 90
Query: 58 QKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI 117
+ L M E ++D F+ D V MI+ A +DEA+ M +C P+
Sbjct: 91 WSDALVMIE-----RED-FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVT 144
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMR 177
+ TL+ G +K+L + K G P +N++V +YC + AY+++ M
Sbjct: 145 YRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMA 204
Query: 178 KCGIGPNTRTYDIVLHH-----------------------------------------LI 196
CG P Y+I + L
Sbjct: 205 DCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLC 264
Query: 197 KAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVM 256
G+ + A+ + K M K G P STY V+ C +V+ A ++ EMK+ GV P +
Sbjct: 265 GMGKFDMAFQIIKVMMGK-GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDV 323
Query: 257 HMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQA-LRDEGMEETAVVLAQ 315
+ Y+ LI+S C ++ A +F EM IG ++ L A L+ + + + + + +
Sbjct: 324 YTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383
Query: 316 KID 318
ID
Sbjct: 384 MID 386
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 98/230 (42%), Gaps = 40/230 (17%)
Query: 13 FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMK 72
+ +ID LC+ ++A ++ M+++ P++ +YT L++G G+ + +++ +M
Sbjct: 552 YTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMS 611
Query: 73 DDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLS 132
G P+ V+Y ++IN C+A DEA L EM+ T +C+++ G K+
Sbjct: 612 TKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFI 669
Query: 133 EALQFFGQSKKRGFEPEAPTY--------------------------------------N 154
+L + + G P AP Y
Sbjct: 670 ASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYT 729
Query: 155 AVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEA 204
+++ A C + ++ A+ + E+ + G+ P + ++ LIK + EA
Sbjct: 730 SLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEA 779
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 110/314 (35%), Gaps = 74/314 (23%)
Query: 70 EMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATN---------------CKPS 114
E+KD G+ P +Y ++ +A + D + +EM + CK
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 115 ----------------PHIFCT-LINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVV 157
+ CT +I+GL EA+ F + + P TY ++
Sbjct: 90 RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149
Query: 158 GAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGT 217
+ ++ R+++ M K G PN ++ ++H A AY + KRM+ G
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMA-DCGC 208
Query: 218 EPTVSTYEIVV-----------------------------------------RMFCYNAQ 236
P Y I + R C +
Sbjct: 209 PPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 268
Query: 237 VDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSN 296
DMA +I M +G +P YS +I LC K++ A FQEM +G+ P ++
Sbjct: 269 FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTI 328
Query: 297 LKQALRDEGMEETA 310
L + G+ E A
Sbjct: 329 LIDSFCKAGLIEQA 342
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 81/182 (44%), Gaps = 9/182 (4%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M G + LI+ C + ++ A + +MK+ + ++ Y +++G+ K
Sbjct: 610 MSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKK 667
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK---PSPHI 117
++ + E++ G P YG++I+ A R +EA+EL +EM + S +
Sbjct: 668 FIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDM 727
Query: 118 FCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYC----WSMRINDAYRMM 173
+ +LI L +L +A + + + ++G PE + ++ W+ + Y +
Sbjct: 728 YTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSIC 787
Query: 174 DE 175
DE
Sbjct: 788 DE 789
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 143/286 (50%), Gaps = 16/286 (5%)
Query: 11 PD---FNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGW------GQQKNL 61
PD FN L+D LCK ++ A+ V M K +P + +Y L++G+ G+ K++
Sbjct: 261 PDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHV 320
Query: 62 LSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTL 121
LS+ R P+ SY IMIN C K DEA+ LF EM P + +L
Sbjct: 321 LSIISRMR------VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSL 374
Query: 122 INGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGI 181
I+GL R+ A + + + TYN+++ +C + ++ A ++ ++++ GI
Sbjct: 375 IDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGI 434
Query: 182 GPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAM 241
PN TY+I++ L K G+ + A VF+ + K G TY I++ C D A
Sbjct: 435 QPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIK-GYNVNAWTYNIMINGLCKEGLFDEAE 493
Query: 242 RIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGI 287
+ +M+ G++P Y T+I +L H+D+ + A K +EM+ G+
Sbjct: 494 VLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 34/337 (10%)
Query: 16 LIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKNLLSMNEVYREMKDDG 75
LI+ LCK A +V +++ + + ++ Y+ +++G + K + +Y EM
Sbjct: 164 LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR 223
Query: 76 FEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHIFCTLINGLGSEKRLSEAL 135
P VV++ +I C ++ +A LF EM N P + F L++ L E ++ EA
Sbjct: 224 IPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAK 283
Query: 136 QFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHHL 195
K G EP TYN ++ YC + A ++ + + + PN+R+Y+I+++
Sbjct: 284 NVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGF 343
Query: 196 IKAGRTEEAYSVFKRMSR------------------KPGTEP----------------TV 221
K +EA +F M K G P +
Sbjct: 344 CKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADI 403
Query: 222 STYEIVVRMFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQE 281
TY ++ +FC N VD A+ + ++K G+ P M Y+ LI+ LC +L +A FQ+
Sbjct: 404 VTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQD 463
Query: 282 MLDIGIRPPGQLFSNLKQALRDEGMEETAVVLAQKID 318
+L G ++ + L EG+ + A VL K++
Sbjct: 464 LLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKME 500
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 10/318 (3%)
Query: 2 DKFGLKQEL---------PDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILL 52
D +GL E+ F+ LI C + A +F++M + +PD ++ IL+
Sbjct: 211 DAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILV 270
Query: 53 EGWGQQKNLLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCK 112
+ ++ + V M +G EP VV+Y +++ +C +A + +
Sbjct: 271 DALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVA 330
Query: 113 PSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRM 172
P+ + +ING K + EAL F + RG P TYN+++ C + RI A+ +
Sbjct: 331 PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWEL 390
Query: 173 MDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFC 232
+DEM I + TY+ ++ K ++A ++ K++ ++ G +P + TY I++ C
Sbjct: 391 VDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKI-KEHGIQPNMCTYNILIDGLC 449
Query: 233 YNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQ 292
Q+ A ++ ++ +G Y+ +IN LC E D+A +M D GI P
Sbjct: 450 KGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAV 509
Query: 293 LFSNLKQALRDEGMEETA 310
+ + QAL + E A
Sbjct: 510 TYETIIQALFHKDENEKA 527
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 150/316 (47%), Gaps = 23/316 (7%)
Query: 12 DFNRLIDTLCKSR-HVERAQEVFDKMKKRRFDPDIKSYTILLEGW---GQQKNLLSM--- 64
+FN+++ L K++ H + +M+ + PD+ + +IL+ + GQ S+
Sbjct: 68 EFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAK 127
Query: 65 ------------NEV---YREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEAT 109
NE + + GF + V+YGI+IN C + A+++ R++E
Sbjct: 128 ILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGK 187
Query: 110 NCKPSPHIFCTLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDA 169
+ ++ T+I+GL +K +++A + + + P T+++++ +C + DA
Sbjct: 188 LVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDA 247
Query: 170 YRMMDEMRKCGIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVR 229
+R+ +EM I P+ T++I++ L K G+ +EA +V M K G EPTV TY ++
Sbjct: 248 FRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVM-MKEGVEPTVVTYNTLMD 306
Query: 230 MFCYNAQVDMAMRIWDEMKARGVLPVMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRP 289
+C +V A + + V P Y+ +IN C +D+A F EM GI P
Sbjct: 307 GYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAP 366
Query: 290 PGQLFSNLKQALRDEG 305
+++L L G
Sbjct: 367 HKVTYNSLIDGLCKAG 382
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 125/254 (49%), Gaps = 3/254 (1%)
Query: 1 MDKFGLKQELPDFNRLIDTLCKSRHVERAQEVFDKMKKRRFDPDIKSYTILLEGWGQQKN 60
M K G++ + +N L+D C V +A+ V + + R P+ +SY I++ G+ + K
Sbjct: 289 MMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKM 348
Query: 61 LLSMNEVYREMKDDGFEPDVVSYGIMINAHCSAKRYDEAVELFREMEATNCKPSPHI-FC 119
+ ++ EM G P V+Y +I+ C A R A EL EM NC P+ + +
Sbjct: 349 VDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMH-NNCIPADIVTYN 407
Query: 120 TLINGLGSEKRLSEALQFFGQSKKRGFEPEAPTYNAVVGAYCWSMRINDAYRMMDEMRKC 179
+LI+ + + +A+ + K+ G +P TYN ++ C ++ +A + ++
Sbjct: 408 SLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIK 467
Query: 180 GIGPNTRTYDIVLHHLIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDM 239
G N TY+I+++ L K G +EA + +M G P TYE +++ + + +
Sbjct: 468 GYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDN-GIIPDAVTYETIIQALFHKDENEK 526
Query: 240 AMRIWDEMKARGVL 253
A ++ EM +GV+
Sbjct: 527 AQKLLREMVIKGVV 540
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 24/241 (9%)
Query: 97 DEAVELFREMEATNCKPSPHIFCTLINGL-GSEKRLSEALQFFGQSKKRGFEPEAPTYNA 155
D AV F M PS F ++ L ++ L Q + +G +P+ T +
Sbjct: 48 DNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSI 107
Query: 156 VVGAY---------------------CWSMRINDAYRMMDEMRKCGIGPNTRTYDIVLHH 194
++ Y C + ++N+A D + G N TY I+++
Sbjct: 108 LINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILING 167
Query: 195 LIKAGRTEEAYSVFKRMSRKPGTEPTVSTYEIVVRMFCYNAQVDMAMRIWDEMKARGVLP 254
L K G+T A V +++ K V Y ++ C + V A ++ EM + + P
Sbjct: 168 LCKMGQTRAALQVLRQIEGKL-VNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPP 226
Query: 255 VMHMYSTLINSLCHEDKLDDACKYFQEMLDIGIRPPGQLFSNLKQALRDEG-MEETAVVL 313
+ +S+LI C K DA + F EM+ I P F+ L AL EG ++E V+
Sbjct: 227 TVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVI 286
Query: 314 A 314
A
Sbjct: 287 A 287
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,114,319,702
Number of Sequences: 23463169
Number of extensions: 207903946
Number of successful extensions: 654158
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7437
Number of HSP's successfully gapped in prelim test: 4551
Number of HSP's that attempted gapping in prelim test: 484330
Number of HSP's gapped (non-prelim): 72299
length of query: 330
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 188
effective length of database: 9,027,425,369
effective search space: 1697155969372
effective search space used: 1697155969372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 77 (34.3 bits)