BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037624
(408 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP E+ ++ L +L L N+LTG IPS L T+ ++LSNN+L+G IP IG L+ L+
Sbjct: 455 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 514
Query: 61 HLDSRHIFIKGTIPYPLG-VLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLIS 113
L + G IP LG L +LDL+ N +G IP + + + I+
Sbjct: 515 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 568
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 12 LVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIK 70
L LYL N TG IP +L + +L LS N LSG+IPS +G+L +L L ++
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 71 GTIPYPLG-VLPLSYLDLSFNDLSGGIPKHLTT 102
G IP L V L L L FNDL+G IP L+
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 485
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 15 LYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTI 73
L +S N L+G IP +G + L L +N +SGSIP E+G+L+ L+ LD + G I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 74 PYPLGVLP-LSYLDLSFNDLSGGIPK 98
P + L L+ +DLS N+LSG IP+
Sbjct: 694 PQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 26/125 (20%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC------------------------- 36
IP + + LVSL+LS N L+G+IPSSLG L+
Sbjct: 407 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 466
Query: 37 TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGG 95
TL L N L+G IPS + N L+ + + + G IP +G L L+ L LS N SG
Sbjct: 467 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Query: 96 IPKHL 100
IP L
Sbjct: 527 IPAEL 531
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP EIGS+ L L L N+++GSIP +G L L LS+NKL G IP + L L+
Sbjct: 645 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 704
Query: 61 HLDSRHIFIKGTIP 74
+D + + G IP
Sbjct: 705 EIDLSNNNLSGPIP 718
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
+IP E+G LR L L LS N L G IP ++ LT T + LSNN LSG IP E+G +
Sbjct: 668 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFETF 726
Query: 60 SHLDSRHIFIKGTIPYPL 77
++ + G YPL
Sbjct: 727 P--PAKFLNNPGLCGYPL 742
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 12 LVSLYLSGNNLTGSIPSSLGRLTSCTLT---LSNNKLSGSIPSEIGNLQELSHLDSRHIF 68
L++L LS NN +G I +L + TL L NN +G IP + N EL L +
Sbjct: 367 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 426
Query: 69 IKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
+ GTIP LG L L L L N L G IP+ L
Sbjct: 427 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 38 LTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL-PLSYLDLSFNDLSGGI 96
L +S N LSG IP EIG++ L L+ H I G+IP +G L L+ LDLS N L G I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 97 PKHLTTKLRRKVTRLISIVLSIN 119
P+ ++ +T L I LS N
Sbjct: 694 PQAMSA-----LTMLTEIDLSNN 711
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 9 LRNLVSLYLSGNNLTGSIPSSLGRL--TSCTLTLSNNKLSGSIPSEIGNLQELSHLDSRH 66
L++L L L+ N TG IP L T L LS N G++P G+ L L
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 67 IFIKGTIPYP--LGVLPLSYLDLSFNDLSGGIPKHLTT 102
G +P L + L LDLSFN+ SG +P+ LT
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTN 362
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 11 NLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDSRHIFI 69
NL L +S NN + IP LG ++ L +S NKLSG I EL L+
Sbjct: 198 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 70 KGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLT 101
G IP PL + L YL L+ N +G IP L+
Sbjct: 257 VGPIP-PLPLKSLQYLSLAENKFTGEIPDFLS 287
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 7 GSLRNLVSLYLSGNNLTGSIPSSLG-RLTSCTLTLSNNKLSGSIPSE-IGNLQELSHLDS 64
G+ L L LSGN+ G++P G +L LS+N SG +P + + ++ L LD
Sbjct: 288 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 347
Query: 65 RHIFIKGTIPYPLGVLPLSY--LDLSFNDLSGGIPKHLTTKLRRKVTRL 111
G +P L L S LDLS N+ SG I +L + + L
Sbjct: 348 SFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 396
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 9 LRNLVSLYLSGNNLTGS------IPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHL 62
L +L L LS N+++G+ + G L L +S NK+SG + ++ L L
Sbjct: 147 LNSLEVLDLSANSISGANVVGWVLSDGCGELKH--LAISGNKISGDV--DVSRCVNLEFL 202
Query: 63 DSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLIS 113
D IP+ L +LD+S N LSG + ++T K+ + S
Sbjct: 203 DVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 253
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP E+ ++ L +L L N+LTG IPS L T+ ++LSNN+L+G IP IG L+ L+
Sbjct: 458 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517
Query: 61 HLDSRHIFIKGTIPYPLG-VLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLIS 113
L + G IP LG L +LDL+ N +G IP + + + I+
Sbjct: 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 571
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 12 LVSLYLSGNNLTGSIPSSLGRLTS-CTLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIK 70
L LYL N TG IP +L + +L LS N LSG+IPS +G+L +L L ++
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 71 GTIPYPLG-VLPLSYLDLSFNDLSGGIPKHLTT 102
G IP L V L L L FNDL+G IP L+
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 15 LYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTI 73
L +S N L+G IP +G + L L +N +SGSIP E+G+L+ L+ LD + G I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 74 PYPLGVLP-LSYLDLSFNDLSGGIPK 98
P + L L+ +DLS N+LSG IP+
Sbjct: 697 PQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 26/125 (20%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSC------------------------- 36
IP + + LVSL+LS N L+G+IPSSLG L+
Sbjct: 410 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469
Query: 37 TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGG 95
TL L N L+G IPS + N L+ + + + G IP +G L L+ L LS N SG
Sbjct: 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Query: 96 IPKHL 100
IP L
Sbjct: 530 IPAEL 534
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELS 60
IP EIGS+ L L L N+++GSIP +G L L LS+NKL G IP + L L+
Sbjct: 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707
Query: 61 HLDSRHIFIKGTIP 74
+D + + G IP
Sbjct: 708 EIDLSNNNLSGPIP 721
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
+IP E+G LR L L LS N L G IP ++ LT T + LSNN LSG IP E+G +
Sbjct: 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP-EMGQFETF 729
Query: 60 SHLDSRHIFIKGTIPYPL 77
++ + G YPL
Sbjct: 730 PP--AKFLNNPGLCGYPL 745
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 12 LVSLYLSGNNLTGSIPSSLGRLTSCTLT---LSNNKLSGSIPSEIGNLQELSHLDSRHIF 68
L++L LS NN +G I +L + TL L NN +G IP + N EL L +
Sbjct: 370 LLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNY 429
Query: 69 IKGTIPYPLGVLP-LSYLDLSFNDLSGGIPKHL 100
+ GTIP LG L L L L N L G IP+ L
Sbjct: 430 LSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 38 LTLSNNKLSGSIPSEIGNLQELSHLDSRHIFIKGTIPYPLGVL-PLSYLDLSFNDLSGGI 96
L +S N LSG IP EIG++ L L+ H I G+IP +G L L+ LDLS N L G I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 97 PKHLTTKLRRKVTRLISIVLSIN 119
P+ ++ +T L I LS N
Sbjct: 697 PQAMSA-----LTMLTEIDLSNN 714
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 9 LRNLVSLYLSGNNLTGSIPSSL-GRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDSRH 66
L++L L L+ N TG IP L G + T L LS N G++P G+ L L
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 67 IFIKGTIPYP--LGVLPLSYLDLSFNDLSGGIPKHLTT 102
G +P L + L LDLSFN+ SG +P+ LT
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTN 365
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 11 NLVSLYLSGNNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQELSHLDSRHIFI 69
NL L +S NN + IP LG ++ L +S NKLSG I EL L+
Sbjct: 201 NLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 70 KGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLT 101
G IP PL + L YL L+ N +G IP L+
Sbjct: 260 VGPIP-PLPLKSLQYLSLAENKFTGEIPDFLS 290
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 7 GSLRNLVSLYLSGNNLTGSIPSSLG-RLTSCTLTLSNNKLSGSIPSE-IGNLQELSHLDS 64
G+ L L LSGN+ G++P G +L LS+N SG +P + + ++ L LD
Sbjct: 291 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 350
Query: 65 RHIFIKGTIPYPLGVLPLSY--LDLSFNDLSGGIPKHLTTKLRRKVTRL 111
G +P L L S LDLS N+ SG I +L + + L
Sbjct: 351 SFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQEL 399
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 9 LRNLVSLYLSGNNLTGS------IPSSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHL 62
L +L L LS N+++G+ + G L L +S NK+SG + ++ L L
Sbjct: 150 LNSLEVLDLSANSISGANVVGWVLSDGCGELKH--LAISGNKISGDV--DVSRCVNLEFL 205
Query: 63 DSRHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLIS 113
D IP+ L +LD+S N LSG + ++T K+ + S
Sbjct: 206 DVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 209
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDI---- 224
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 225 -------LYPKYDIETLLSFMDFVCIKDACF---WFMNTWRGEACSVFCTMIMKPLSWIG 274
LY + T + + + + ++ + + + + T + LS+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 182
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 200
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG + H SS T L+GT Y
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCH--APSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 183
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEXIEGRXH 188
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 187
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 188
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTELCGTLDYLPPEMIEGRMH 183
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTDLCGTLDYLPPEMIEGRMH 184
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTDLCGTLDYLPPEMIEGRMH 188
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTDLCGTLDYLPPEMIEGRMH 183
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 88/241 (36%), Gaps = 61/241 (25%)
Query: 161 RFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQN 220
RF ++ A+++F K G GG+G VY +L ++A+K+L E FQ
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLK--EERXQGGELQFQT 84
Query: 221 EVDILYPKYDIETLLSFMDFVCIKDA----CFWFMNTWRGEACSVFCTMIMKPLSW---- 272
EV+++ LL F C+ + +M +C PL W
Sbjct: 85 EVEMISMAVH-RNLLRLRGF-CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 142
Query: 273 -IGL------------------------------RELEAFVADFGMTMHL-YCDSSNLTL 300
I L E EA V DFG+ + Y D
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGEXXXXXXXXXXXDQNIMLL 348
+ GT G+ EK DV+ +GV+ LE++ G++ D ++MLL
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR-----AFDLARLANDDDVMLL 257
Query: 349 D 349
D
Sbjct: 258 D 258
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 45/202 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL----Y 226
EDFDI G G +G+VY+A+ SK ++ALK L + E+ + EV+I +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 227 PK--------YDIETLLSFMDFVCIKDACFWFMNTWR--GEACSVFCTMIMKPLSWIGLR 276
P +D + +++ + R + + + T + LS+ +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 277 EL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY------------E 308
+ E +ADFG ++H SS T L GT Y E
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 309 KCDVYSFGVVALEILMGRQPGE 330
K D++S GV+ E L+G P E
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDI---- 224
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 225 -------LYPKYDIETLLSFMDFVCIKDACF---WFMNTWRGEACSVFCTMIMKPLSWIG 274
LY + T + + + + ++ + + + + T + LS+
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS L GT Y
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRXXLXGTLDYLPPEMIEGRMH 188
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS L GT Y
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +A+FG ++H SS T L GT Y
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 186
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ +SK ++ALK L + E+ + EV+I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+++ E +ADFG ++H SS L GT Y
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ K ++ALK L + E+ + EV+I
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS T L GT Y
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 180
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS L GT Y
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRXXLCGTLDYLPPEMIEGRMH 185
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +A+FG ++H SS T L GT Y
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWSVH--APSSRRTTLCGTLDYLPPEMIEGRMH 185
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS L GT Y
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRXXLCGTLDYLPPEMIEGRMH 183
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS L GT Y
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRAALCGTLDYLPPEMIEGRMH 186
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS L GT Y
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRXXLCGTLDYLPPEMIEGRMH 186
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 49/147 (33%)
Query: 1 TIPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRLTS--CTLTLSNNKLSGSIPSEIGNL-- 56
T+P I SL NLV + GN ++G+IP S G + ++T+S N+L+G IP NL
Sbjct: 140 TLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL 199
Query: 57 --------------------------------------------QELSHLDSRHIFIKGT 72
+ L+ LD R+ I GT
Sbjct: 200 AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGT 259
Query: 73 IPYPLGVLP-LSYLDLSFNDLSGGIPK 98
+P L L L L++SFN+L G IP+
Sbjct: 260 LPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 2 IPLEIGSLRNLVSLYLSG-NNLTGSIPSSLGRLTSCT-LTLSNNKLSGSIPSEIGNLQEL 59
IP + +L L LY+ G NNL G IP ++ +LT L +++ +SG+IP + ++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 60 SHLDSRHIFIKGTIPYPLGVLP-LSYLDLSFNDLSGGIP 97
LD + + GT+P + LP L + N +SG IP
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 2 IPLEIGSLRNLVSLYLSGNNLTGSIPSSLGRL-TSCTLTLSNNKLSGSIPSEIGNLQELS 60
IP I L L LY++ N++G+IP L ++ T TL S N LSG++P I +L L
Sbjct: 93 IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152
Query: 61 HLDSRHIFIKGTIPYPLGVLP--LSYLDLSFNDLSGGIP 97
+ I G IP G + + +S N L+G IP
Sbjct: 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 191
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 14 SLYLSGNNLTGS--IPSSLGRLTSCTLTLSN--NKLSGSIPSEIGNLQELSHLDSRHIFI 69
+L LSG NL IPSSL L N L G IP I L +L +L H +
Sbjct: 54 NLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNV 113
Query: 70 KGTIPYPLG-VLPLSYLDLSFNDLSGGIPKHLTT 102
G IP L + L LD S+N LSG +P +++
Sbjct: 114 SGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS L GT Y
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRDTLCGTLDYLPPEMIEGRMH 184
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS L GT Y
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRDDLCGTLDYLPPEMIEGRMH 209
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 45/204 (22%)
Query: 170 ATEDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL--- 225
A EDF+I G G +G+VY+A+ SK ++ALK L + E+ + EV+I
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 226 -YPK--------YDIETLLSFMDFVCIKDAC--FWFMNTWRGEACSVFCTMIMKPLSWIG 274
+P +D + +++ + ++ + + + + T + LS+
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 275 LREL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY----------- 307
+ + E +ADFG ++H SS L GT Y
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVH--APSSRRDDLCGTLDYLPPEMIEGRMH 186
Query: 308 -EKCDVYSFGVVALEILMGRQPGE 330
EK D++S GV+ E L+G+ P E
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 45/202 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL----Y 226
EDFDI G G +G+VY+A+ SK ++ALK L + E+ + EV+I +
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 227 PK--------YDIETLLSFMDFVCIKDACFWFMNTWR--GEACSVFCTMIMKPLSWIGLR 276
P +D + +++ + R + + + T + LS+ +
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 277 EL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY------------E 308
+ E +ADFG ++H SS L GT Y E
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVH--APSSRRDTLCGTLDYLPPEMIEGRMHDE 189
Query: 309 KCDVYSFGVVALEILMGRQPGE 330
K D++S GV+ E L+G P E
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 104/289 (35%), Gaps = 70/289 (24%)
Query: 161 RFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQN 220
RF ++ A+++F K G GG+G VY +L ++A+K+L E FQ
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLK--EERTQGGELQFQT 76
Query: 221 EVDILYPKYDIETLLSFMDFVCIKDA----CFWFMNTWRGEACSVFCTMIMKPLSW---- 272
EV+++ LL F C+ + +M +C PL W
Sbjct: 77 EVEMISMAVH-RNLLRLRGF-CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134
Query: 273 -IGL------------------------------RELEAFVADFGMTMHL-YCDSSNLTL 300
I L E EA V DFG+ + Y D
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 301 LAGTYGY------------EKCDVYSFGVVALEILMGRQPGEXXXXXXXXXXXDQNIMLL 348
+ G G+ EK DV+ +GV+ LE++ G++ D ++MLL
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR-----AFDLARLANDDDVMLL 249
Query: 349 DVLDPRLSPPVDRMVVRDIVL--------VSTILFACLRSNPKTPMQKP 389
D + L +V D+ L V ++ L +PM++P
Sbjct: 250 DWVKGLLKEKKLEALV-DVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 297
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDIL 225
EDF+I G G +G V + +L ++ KV A+K L+ WE + A T F+ E D+L
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL 128
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 144 RNSIRRDN---EFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSS-KVI 199
+++RRD EF W + ++ EDF+I G G +G V + ++ ++ ++
Sbjct: 43 HSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIY 102
Query: 200 ALKKLHHWENEEPASTRSFQNEVDIL 225
A+K L+ WE + A T F+ E D+L
Sbjct: 103 AMKILNKWEMLKRAETACFREERDVL 128
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 144 RNSIRRDN---EFSVWNFDGRFVFGDIIEATEDFDIKYCFGTGGYGSVYIAQLTSS-KVI 199
+++RRD EF W + ++ EDF+I G G +G V + ++ ++ ++
Sbjct: 59 HSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIY 118
Query: 200 ALKKLHHWENEEPASTRSFQNEVDIL 225
A+K L+ WE + A T F+ E D+L
Sbjct: 119 AMKILNKWEMLKRAETACFREERDVL 144
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 65/252 (25%)
Query: 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTR--------- 216
D+ EAT +FD K+ G G +G VY L +ALK+ P S++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR------RTPESSQGIEEFETEI 86
Query: 217 ---SF---------------QNEVDILYPKY----DIETLLSFMDFVCIKDACFWFMNTW 254
SF +NE+ ++Y KY +++ L D + + +
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIY-KYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 255 RGEACSVFC----TMIMKPLSWIGLRELEAFV---ADFGMTMH-LYCDSSNL-TLLAGTY 305
G A + +I + + I + E FV DFG++ D ++L ++ GT
Sbjct: 146 IGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 306 GY------------EKCDVYSFGVVALEILMGRQ------PGEXXXXXXXXXXXDQNIML 347
GY EK DVYSFGVV E+L R P E N L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 348 LDVLDPRLSPPV 359
++DP L+ +
Sbjct: 266 EQIVDPNLADKI 277
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 45/202 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDILYPKYD 230
+DF+I G G +G+VY+A+ S ++ALK L + E+ + E++I +
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 231 IETLLSFMDFVCIKDACFWFMNTWRGE-------ACS-----------------VFC--- 263
L + F + RGE +C+ ++C
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 264 ---TMIMKPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------E 308
+KP + + + E +ADFG ++H S + GT Y E
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSVH--APSLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 309 KCDVYSFGVVALEILMGRQPGE 330
K D++ GV+ E+L+G P E
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFE 222
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 45/200 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL----Y 226
+DFDI G G +G+VY+A+ +K ++ALK L + E+ + E++I +
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 227 PK--------YDIETLLSFMDFVCIKDACFWFMNTWR--GEACSVFCTMIMKPLSWIGLR 276
P +D + + ++F + R + + F + L + R
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 277 EL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY------------E 308
++ E +ADFG ++H S + GT Y E
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSVH--APSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 309 KCDVYSFGVVALEILMGRQP 328
K D++ GV+ E L+G P
Sbjct: 193 KVDLWCAGVLCYEFLVGMPP 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 45/200 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL----Y 226
+DFDI G G +G+VY+A+ +K ++ALK L + E+ + E++I +
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 227 PK--------YDIETLLSFMDFVCIKDACFWFMNTWR--GEACSVFCTMIMKPLSWIGLR 276
P +D + + ++F + R + + F + L + R
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 277 EL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY------------E 308
++ E +ADFG ++H S + GT Y E
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVH--APSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 309 KCDVYSFGVVALEILMGRQP 328
K D++ GV+ E L+G P
Sbjct: 192 KVDLWCAGVLCYEFLVGMPP 211
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 45/200 (22%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLTSSK-VIALKKLHHWENEEPASTRSFQNEVDIL----Y 226
+DFDI G G +G+VY+A+ +K ++ALK L + E+ + E++I +
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 227 PK--------YDIETLLSFMDFVCIKDACFWFMNTWR--GEACSVFCTMIMKPLSWIGLR 276
P +D + + ++F + R + + F + L + R
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 277 EL----------------EAFVADFGMTMHLYCDSSNLTLLAGTYGY------------E 308
++ E +ADFG ++H S + GT Y E
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVH--APSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 309 KCDVYSFGVVALEILMGRQP 328
K D++ GV+ E L+G P
Sbjct: 192 KVDLWCAGVLCYEFLVGMPP 211
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 12/105 (11%)
Query: 12 LVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHIF-- 68
L LYL+GN+LT +P+ + L++ L LS+N+L+ S+P+E+G+ +L + + F
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF---YFFDN 303
Query: 69 IKGTIPYPLGVL-PLSYLDLSFNDLSGGIPKHLTTKLRRKVTRLI 112
+ T+P+ G L L +L + N L K LT K VT LI
Sbjct: 304 MVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEK---SVTGLI 345
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSSKVIALKK 203
D+ EAT +FD K+ G G +G VY L +ALK+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR 70
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 18/78 (23%)
Query: 300 LLAGTYGY------------EKCDVYSFGVVALEILMGRQ------PGEXXXXXXXXXXX 341
++ GT GY EK DVYSFGVV E+L R P E
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 342 DQNIMLLDVLDPRLSPPV 359
N L ++DP L+ +
Sbjct: 260 HNNGQLEQIVDPNLADKI 277
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 82/209 (39%), Gaps = 62/209 (29%)
Query: 172 EDFDIKYC--FGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDI 224
E+ +KY G G +GSV + + + ++A+K+L H P R FQ E+ I
Sbjct: 5 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQI 61
Query: 225 LYP-------KY----------DIETLLSFMDFVCIKDACFWFMNTWRGEACSV--FCTM 265
L KY ++ ++ ++ C++D F + R +A + + +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRD--FLQRHRARLDASRLLLYSSQ 119
Query: 266 IMKPLSWIGLR--------------ELEAFV--ADFGMTMHLYCDSSNLTL--------- 300
I K + ++G R E EA V ADFG+ L D +
Sbjct: 120 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 301 ------LAGTYGYEKCDVYSFGVVALEIL 323
L+ + DV+SFGVV E+
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 62/209 (29%)
Query: 172 EDFDIKYC--FGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDI 224
E+ +KY G G +GSV + + + ++A+K+L H P R FQ E+ I
Sbjct: 8 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQI 64
Query: 225 LYP-----------------KYDIETLLSFMDFVCIKDACFWFMNTWRGEACSV--FCTM 265
L + + ++ ++ C++D F + R +A + + +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD--FLQRHRARLDASRLLLYSSQ 122
Query: 266 IMKPLSWIGLR--------------ELEAFV--ADFGMTMHLYCDSSNLTL--------- 300
I K + ++G R E EA V ADFG+ L D +
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 182
Query: 301 ------LAGTYGYEKCDVYSFGVVALEIL 323
L+ + DV+SFGVV E+
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 56/218 (25%)
Query: 162 FVFGDIIEATEDFDIKYC------FGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPAS- 214
F F ++ T +FD + G GG+G VY + ++ V A+KKL +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEEL 73
Query: 215 TRSFQNEVDILYPKYDIETLLSFMDFVCI-KDACFWFMNTWRGEACS-VFCTMIMKPLSW 272
+ F E+ ++ K E L+ + F D C ++ G + C PLSW
Sbjct: 74 KQQFDQEIKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 273 I-----------GLREL------------------EAFVA---DFGMTM--HLYCDSSNL 298
G+ L EAF A DFG+ + +
Sbjct: 133 HMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 299 TLLAGTYGY-----------EKCDVYSFGVVALEILMG 325
+ + GT Y K D+YSFGVV LEI+ G
Sbjct: 193 SRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 75/203 (36%), Gaps = 47/203 (23%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQLT-SSKVIALKKLHHWENEEPASTRSFQNEVDIL----- 225
+ F+I G G +G V I Q + K+ A+K ++ + E R+ E+ I+
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 226 -------YPKYDIETLLSFMDFVCIKDACFWFMNT--WRGEACSVF-CTMIM-------- 267
Y D E + +D + D + ++ E +F C ++M
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 268 -------KPLSWIGLRELEAFVADFGMTMHLYCDSSNLTLLAGTYGYEK----------- 309
KP + + + DF + L + +T +AGT Y
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAGTKPYMAPEMFSSRKGAG 193
Query: 310 ----CDVYSFGVVALEILMGRQP 328
D +S GV A E+L GR+P
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 62/209 (29%)
Query: 172 EDFDIKYC--FGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDI 224
E+ +KY G G +GSV + + + ++A+K+L H P R FQ E+ I
Sbjct: 9 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQI 65
Query: 225 LYP-----------------KYDIETLLSFMDFVCIKDACFWFMNTWRGEACSV--FCTM 265
L + + ++ ++ C++D F + R +A + + +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD--FLQRHRARLDASRLLLYSSQ 123
Query: 266 IMKPLSWIGLR--------------ELEAFV--ADFGMTMHLYCDSSNLTL--------- 300
I K + ++G R E EA V ADFG+ L D +
Sbjct: 124 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 183
Query: 301 ------LAGTYGYEKCDVYSFGVVALEIL 323
L+ + DV+SFGVV E+
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 49/206 (23%)
Query: 171 TEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDILY--- 226
ED+D+ G G +G V + + +S KV A+K L +E + + + F E DI+
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN 133
Query: 227 ---------PKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCT----MIMKPLSWI 273
D + L M+++ D N E + F T + + + +
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 274 GL--RELEA-----------FVADFGMTMHL------YCDSSNLT-------LLA----- 302
GL R+++ +ADFG M + +CD++ T +L
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGD 253
Query: 303 GTYGYEKCDVYSFGVVALEILMGRQP 328
G YG E CD +S GV E+L+G P
Sbjct: 254 GYYGRE-CDWWSVGVFLFEMLVGDTP 278
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 62/209 (29%)
Query: 172 EDFDIKYC--FGTGGYGSVYIAQL-----TSSKVIALKKLHHWENEEPASTRSFQNEVDI 224
E+ +KY G G +GSV + + + ++A+K+L H P R FQ E+ I
Sbjct: 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQH---SGPDQQRDFQREIQI 77
Query: 225 LYP-----------------KYDIETLLSFMDFVCIKDACFWFMNTWRGEACSV--FCTM 265
L + + ++ ++ C++D F + R +A + + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD--FLQRHRARLDASRLLLYSSQ 135
Query: 266 IMKPLSWIGLR--------------ELEAFV--ADFGMTMHLYCDSSNLTL--------- 300
I K + ++G R E EA V ADFG+ L D +
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF 195
Query: 301 ------LAGTYGYEKCDVYSFGVVALEIL 323
L+ + DV+SFGVV E+
Sbjct: 196 WYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 80/218 (36%), Gaps = 56/218 (25%)
Query: 162 FVFGDIIEATEDFDIKYC------FGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPAS- 214
F F ++ T +FD + G GG+G VY + ++ V A+KKL +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEEL 73
Query: 215 TRSFQNEVDILYPKYDIETLLSFMDFVCI-KDACFWFMNTWRGEACS-VFCTMIMKPLSW 272
+ F E+ ++ K E L+ + F D C ++ G + C PLSW
Sbjct: 74 KQQFDQEIKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 273 I-----------GLREL------------------EAFVA---DFGMTM--HLYCDSSNL 298
G+ L EAF A DFG+ + +
Sbjct: 133 HMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMX 192
Query: 299 TLLAGTYGY-----------EKCDVYSFGVVALEILMG 325
+ GT Y K D+YSFGVV LEI+ G
Sbjct: 193 XRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 49/211 (23%)
Query: 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDI 224
D+ ED+++ G G +G V + + S+ KV A+K L +E + + + F E DI
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 225 L------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTM------- 265
+ Y D L M+++ D N E + F T
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALD 182
Query: 266 ----------IMKPLSWIGLRELEAFVADFGMTMHL------YCDSSNLT-------LLA 302
+KP + + + +ADFG M + CD++ T +L
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 303 -----GTYGYEKCDVYSFGVVALEILMGRQP 328
G YG E CD +S GV E+L+G P
Sbjct: 243 SQGGDGYYGRE-CDWWSVGVFLYEMLVGDTP 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 49/211 (23%)
Query: 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDI 224
D+ ED+++ G G +G V + + S+ KV A+K L +E + + + F E DI
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 225 L------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTM------- 265
+ Y D L M+++ D N E + F T
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALD 187
Query: 266 ----------IMKPLSWIGLRELEAFVADFGMTMHL------YCDSSNLT-------LLA 302
+KP + + + +ADFG M + CD++ T +L
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 303 -----GTYGYEKCDVYSFGVVALEILMGRQP 328
G YG E CD +S GV E+L+G P
Sbjct: 248 SQGGDGYYGRE-CDWWSVGVFLYEMLVGDTP 277
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 168 IEATEDFDIKYCFGTGGYGSVYIA-QLTSSKVIALKKLH 205
++ ++++IK+ G G YG VY+A ++K +A+KK++
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVN 62
>pdb|3LX9|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities
pdb|3LX9|B Chain B, Interconversion Of Human Lysosomal Enzyme Specificities
pdb|3LXA|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities
pdb|3LXA|B Chain B, Interconversion Of Human Lysosomal Enzyme Specificities
pdb|3LXB|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities
pdb|3LXB|B Chain B, Interconversion Of Human Lysosomal Enzyme Specificities
pdb|3LXC|A Chain A, Interconversion Of Human Lysosomal Enzyme Specificities
pdb|3LXC|B Chain B, Interconversion Of Human Lysosomal Enzyme Specificities
Length = 404
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 274 GLRELEAFVADFGMTMHLYCDSSNLTLLA--GTYGYEKCDVYSFGVVALEIL 323
G+R+L +V G+ + +Y D N T G++GY D +F +++L
Sbjct: 85 GIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLL 136
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 79/218 (36%), Gaps = 56/218 (25%)
Query: 162 FVFGDIIEATEDFDIKYC------FGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPAS- 214
F F ++ T +FD + G GG+G VY + ++ +A+KKL +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEEL 64
Query: 215 TRSFQNEVDILYPKYDIETLLSFMDFVCI-KDACFWFMNTWRGEACS-VFCTMIMKPLSW 272
+ F E+ + K E L+ + F D C ++ G + C PLSW
Sbjct: 65 KQQFDQEIKVX-AKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 273 I-----------GLREL------------------EAFVA---DFGMTM--HLYCDSSNL 298
G+ L EAF A DFG+ +
Sbjct: 124 HXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXX 183
Query: 299 TLLAGTYGYE-----------KCDVYSFGVVALEILMG 325
+ + GT Y K D+YSFGVV LEI+ G
Sbjct: 184 SRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|1R46|A Chain A, Structure Of Human Alpha-galactosidase
pdb|1R46|B Chain B, Structure Of Human Alpha-galactosidase
pdb|1R47|A Chain A, Structure Of Human Alpha-Galactosidase
pdb|1R47|B Chain B, Structure Of Human Alpha-Galactosidase
pdb|3GXN|A Chain A, Crystal Structure Of Apo Alpha-Galactosidase A At Ph 4.5
pdb|3GXN|B Chain B, Crystal Structure Of Apo Alpha-Galactosidase A At Ph 4.5
pdb|3GXP|A Chain A, Crystal Structure Of Acid-alpha-galactosidase A Complexed
With Galactose At Ph 4.5
pdb|3GXP|B Chain B, Crystal Structure Of Acid-alpha-galactosidase A Complexed
With Galactose At Ph 4.5
pdb|3GXT|A Chain A, Crystal Structure Of Alpha-Galactosidase A At Ph 4.5
Complexed With 1- Deoxygalactonijirimycin
pdb|3GXT|B Chain B, Crystal Structure Of Alpha-Galactosidase A At Ph 4.5
Complexed With 1- Deoxygalactonijirimycin
pdb|3HG2|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 1. Empty
Active Site
pdb|3HG2|B Chain B, Human Alpha-Galactosidase Catalytic Mechanism 1. Empty
Active Site
pdb|3HG4|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 3. Covalent
Intermediate
pdb|3HG4|B Chain B, Human Alpha-Galactosidase Catalytic Mechanism 3. Covalent
Intermediate
pdb|3HG5|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 4. Product
Bound
pdb|3HG5|B Chain B, Human Alpha-Galactosidase Catalytic Mechanism 4. Product
Bound
pdb|3S5Y|A Chain A, Pharmacological Chaperoning In Human Alpha-Galactosidase
pdb|3S5Y|B Chain B, Pharmacological Chaperoning In Human Alpha-Galactosidase
pdb|3S5Z|A Chain A, Pharmacological Chaperoning In Human Alpha-Galactosidase
pdb|3S5Z|B Chain B, Pharmacological Chaperoning In Human Alpha-Galactosidase
Length = 398
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 274 GLRELEAFVADFGMTMHLYCDSSNLTLLA--GTYGYEKCDVYSFGVVALEIL 323
G+R+L +V G+ + +Y D N T G++GY D +F +++L
Sbjct: 85 GIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLL 136
>pdb|3HG3|A Chain A, Human Alpha-Galactosidase Catalytic Mechanism 2. Substrate
Bound
pdb|3HG3|B Chain B, Human Alpha-Galactosidase Catalytic Mechanism 2. Substrate
Bound
pdb|3TV8|A Chain A, Pharmacological Chaperoning In Human Alpha-Galactosidase
pdb|3TV8|B Chain B, Pharmacological Chaperoning In Human Alpha-Galactosidase
Length = 404
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 274 GLRELEAFVADFGMTMHLYCDSSNLTLLA--GTYGYEKCDVYSFGVVALEIL 323
G+R+L +V G+ + +Y D N T G++GY D +F +++L
Sbjct: 85 GIRQLANYVHSKGLKLGIYADVGNKTCAGFPGSFGYYDIDAQTFADWGVDLL 136
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 49/211 (23%)
Query: 166 DIIEATEDFDIKYCFGTGGYGSVYIAQLTSS-KVIALKKLHHWENEEPASTRSFQNEVDI 224
D+ ED+++ G G +G V + + S+ KV A+K L +E + + + F E DI
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 225 L------------YPKYDIETLLSFMDFVCIKDACFWFMNTWRGEACSVFCTM------- 265
+ Y D L M+++ D N E + F T
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALD 187
Query: 266 ----------IMKPLSWIGLRELEAFVADFGMTMHL------YCDSSNLT-------LLA 302
+KP + + + +ADFG M + CD++ T +L
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 303 -----GTYGYEKCDVYSFGVVALEILMGRQP 328
G YG E CD +S GV E+L+G P
Sbjct: 248 SQGGDGYYGRE-CDWWSVGVFLYEMLVGDTP 277
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Query: 282 VADFG----MTMHLYCDSSNLTLLA-----GTYGYEKCDVYSFGVVALEILMGRQP 328
+ DFG + H+ + + +A G+ EKCDV+S+G++ E++ R+P
Sbjct: 148 ICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 203
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Query: 282 VADFG----MTMHLYCDSSNLTLLA-----GTYGYEKCDVYSFGVVALEILMGRQP 328
+ DFG + H+ + + +A G+ EKCDV+S+G++ E++ R+P
Sbjct: 147 ICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 202
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 79/218 (36%), Gaps = 56/218 (25%)
Query: 162 FVFGDIIEATEDFDIKYC------FGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPAS- 214
F F ++ T +FD + G GG+G VY + ++ V A+KKL +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEEL 67
Query: 215 TRSFQNEVDILYPKYDIETLLSFMDFVCI-KDACFWFMNTWRGEACS-VFCTMIMKPLSW 272
+ F E+ ++ K E L+ + F D C ++ G + C PLSW
Sbjct: 68 KQQFDQEIKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 273 I-----------GLREL------------------EAFVA---DFGMTM--HLYCDSSNL 298
G+ L EAF A DFG+ +
Sbjct: 127 HMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMX 186
Query: 299 TLLAGTYGY-----------EKCDVYSFGVVALEILMG 325
+ GT Y K D+YSFGVV LEI+ G
Sbjct: 187 XRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
+ SL NL L L+ N ++ P S L +LT L L N++S P + L L++L+
Sbjct: 235 LASLTNLTDLDLANNQISNLAPLSGLTKLTE--LKLGANQISNISP--LAGLTALTNLEL 290
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR 106
++ P + L+YL L FN++S P TKL+R
Sbjct: 291 NENQLEDISPIS-NLKNLTYLTLYFNNISDISPVSSLTKLQR 331
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
+ SL NL L L+ N ++ P S L +LT L L N++S P + L L++L+
Sbjct: 235 LASLTNLTDLDLANNQISNLAPLSGLTKLTE--LKLGANQISNISP--LAGLTALTNLEL 290
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR 106
++ P + L+YL L FN++S P TKL+R
Sbjct: 291 NENQLEDISPIS-NLKNLTYLTLYFNNISDISPVSSLTKLQR 331
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
+ SL NL L L+ N ++ P S L +LT L L N++S P + L L++L+
Sbjct: 234 LASLTNLTDLDLANNQISNLAPLSGLTKLTE--LKLGANQISNISP--LAGLTALTNLEL 289
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR 106
++ P + L+YL L FN++S P TKL+R
Sbjct: 290 NENQLEDISPIS-NLKNLTYLTLYFNNISDISPVSSLTKLQR 330
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
+ SL NL L L+ N ++ P S L +LT L L N++S P + L L++L+
Sbjct: 234 LASLTNLTDLDLANNQISNLAPLSGLTKLTE--LKLGANQISNISP--LAGLTALTNLEL 289
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR 106
++ P + L+YL L FN++S P TKL+R
Sbjct: 290 NENQLEDISPIS-NLKNLTYLTLYFNNISDISPVSSLTKLQR 330
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
+ SL NL L L+ N ++ P S L +LT L L N++S P + L L++L+
Sbjct: 235 LASLTNLTDLDLANNQISNLAPLSGLTKLTE--LKLGANQISNISP--LAGLTALTNLEL 290
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR 106
++ P + L+YL L FN++S P TKL+R
Sbjct: 291 NENQLEDISPIS-NLKNLTYLTLYFNNISDISPVSSLTKLQR 331
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Query: 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM 324
+LE + DFG+ + D +L GT Y + DV+S G + +L+
Sbjct: 175 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 234
Query: 325 GRQPGE 330
G+ P E
Sbjct: 235 GKPPFE 240
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 161 RFVFGDIIE--ATEDFDIKYCFGTGGYGSVYIAQLTSSKVIA 200
+F G+II A +++ + G GG+G +Y+A + SS+ +
Sbjct: 22 QFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVG 63
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 161 RFVFGDIIE--ATEDFDIKYCFGTGGYGSVYIAQLTSSKVIA 200
+F G+II A +++ + G GG+G +Y+A + SS+ +
Sbjct: 22 QFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVG 63
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Query: 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM 324
+LE + DFG+ + D +L GT Y + DV+S G + +L+
Sbjct: 177 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236
Query: 325 GRQPGE 330
G+ P E
Sbjct: 237 GKPPFE 242
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 172 EDFDIKYCFGTGGYGSVYIAQL-TSSKVIALKKLHHWENEEPASTRSFQNEVDIL 225
+DF+I G G + V + ++ + +V A+K ++ W+ + F+ E D+L
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVL 115
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 12/66 (18%)
Query: 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM 324
+LE + DFG+ + D +L GT Y + DV+S G + +L+
Sbjct: 151 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 210
Query: 325 GRQPGE 330
G+ P E
Sbjct: 211 GKPPFE 216
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
+ SL NL L L+ N ++ P S L +LT L L N++S P + L L++L+
Sbjct: 239 LASLTNLTDLDLANNQISNLAPLSGLTKLTE--LKLGANQISNISP--LAGLTALTNLEL 294
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR 106
++ P + L+YL L FN++S P TKL+R
Sbjct: 295 NENQLEDISPIS-NLKNLTYLTLYFNNISDISPVSSLTKLQR 335
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 6 IGSLRNLVSLYLSGNNLTGSIP-SSLGRLTSCTLTLSNNKLSGSIPSEIGNLQELSHLDS 64
+ SL NL L L+ N ++ P S L +LT L L N++S P + L L++L+
Sbjct: 238 LASLTNLTDLDLANNQISNLAPLSGLTKLTE--LKLGANQISNISP--LAGLTALTNLEL 293
Query: 65 RHIFIKGTIPYPLGVLPLSYLDLSFNDLSGGIPKHLTTKLRR 106
++ P + L+YL L FN++S P TKL+R
Sbjct: 294 NENQLEDISPIS-NLKNLTYLTLYFNNISDISPVSSLTKLQR 334
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 168 IEATEDFDIKYCFGTGGYGSVYIA-QLTSSKVIALKKLH 205
+ +++ IK+ G G YG VY+A + K +A+KK++
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN 60
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM 324
+LE + DFG+ + D L GT Y + DV+S G + +L+
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 325 GRQPGE 330
G+ P E
Sbjct: 213 GKPPFE 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM 324
+LE + DFG+ + D L GT Y + DV+S G + +L+
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 325 GRQPGE 330
G+ P E
Sbjct: 213 GKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 277 ELEAFVADFGMTMHLYCDSSNLTLLAGTYGY------------EKCDVYSFGVVALEILM 324
+LE + DFG+ + D L GT Y + DV+S G + +L+
Sbjct: 157 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 216
Query: 325 GRQPGE 330
G+ P E
Sbjct: 217 GKPPFE 222
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 172 EDF-DIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYD 230
EDF +I G G +G VY AQ + V+A K+ ++EE + E+DIL
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDIL----- 88
Query: 231 IETLLSFMDFVCIKDACFWFMNTW------RGEACSVFCTMIMKPLS 271
+ V + DA ++ N W G A + +PL+
Sbjct: 89 --ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT 133
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 172 EDF-DIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYD 230
EDF +I G G +G VY AQ + V+A K+ ++EE + E+DIL
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDIL----- 88
Query: 231 IETLLSFMDFVCIKDACFWFMNTW------RGEACSVFCTMIMKPLS 271
+ V + DA ++ N W G A + +PL+
Sbjct: 89 --ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT 133
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 172 EDF-DIKYCFGTGGYGSVYIAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDILYPKYD 230
EDF +I G G +G VY AQ + V+A K+ ++EE + E+DIL
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEIDIL----- 88
Query: 231 IETLLSFMDFVCIKDACFWFMNTW------RGEACSVFCTMIMKPLS 271
+ V + DA ++ N W G A + +PL+
Sbjct: 89 --ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT 133
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHI 67
L +L +L L+GN + P S LTS L KL+ IG L L L+ H
Sbjct: 74 LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN 133
Query: 68 FIKG-TIP-YPLGVLPLSYLDLSFN 90
FI +P Y + L ++DLS+N
Sbjct: 134 FIHSCKLPAYFSNLTNLVHVDLSYN 158
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 9 LRNLVSLYLSGNNLTGSIPSSLGRLTSC-TLTLSNNKLSGSIPSEIGNLQELSHLDSRHI 67
L +L +L L+GN + P S LTS L KL+ IG L L L+ H
Sbjct: 79 LHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHN 138
Query: 68 FIKG-TIP-YPLGVLPLSYLDLSFN 90
FI +P Y + L ++DLS+N
Sbjct: 139 FIHSCKLPAYFSNLTNLVHVDLSYN 163
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 300 LLAGTYGYEKCDVYSFGVVALEILMGRQP 328
+L GTY EKCDV+S GV+ +L G P
Sbjct: 194 VLRGTYD-EKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 300 LLAGTYGYEKCDVYSFGVVALEILMGRQP 328
+L GTY EKCDV+S GV+ +L G P
Sbjct: 194 VLRGTYD-EKCDVWSAGVILYILLSGTPP 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 300 LLAGTYGYEKCDVYSFGVVALEILMGRQP 328
+L GTY EKCDV+S GV+ +L G P
Sbjct: 194 VLRGTYD-EKCDVWSAGVILYILLSGTPP 221
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 12/58 (20%)
Query: 282 VADFGMTMHLYCDSSNL-----------TLLAGTYGYEKCDVYSFGVVALEILMGRQP 328
+ DFG++ H +L GTY EKCDV+S GV+ +L G P
Sbjct: 170 IIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYD-EKCDVWSTGVILYILLSGCPP 226
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 171 TEDFDIKYCFGTGGYGSVY-IAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL 225
ED+++ Y GTG YG I + + K++ K+L + E A + +EV++L
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLL 59
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 171 TEDFDIKYCFGTGGYGSVY-IAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL 225
ED+++ Y GTG YG I + + K++ K+L + E A + +EV++L
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLL 59
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 171 TEDFDIKYCFGTGGYGSVY-IAQLTSSKVIALKKLHHWENEEPASTRSFQNEVDIL 225
ED+++ Y GTG YG I + + K++ K+L + E A + +EV++L
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLL 59
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 13/113 (11%)
Query: 267 MKPLSWIGLRELEAFVADFGMT--------MHLYCDSSNLT---LLAGT-YGYEKCDVYS 314
+KP + + L +ADFG++ + C S N ++ G Y + DV+S
Sbjct: 134 LKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWS 193
Query: 315 FGVVALEILMGRQPGEXXXXXXXXXXXDQNIMLL-DVLDPRLSPPVDRMVVRD 366
G+V +L+GR P + + + ++ D L P + RM+V D
Sbjct: 194 CGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVAD 246
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 12/58 (20%)
Query: 282 VADFGMTMHLYCDSS-----------NLTLLAGTYGYEKCDVYSFGVVALEILMGRQP 328
+ DFG++ H +L GTY EKCDV+S GV+ +L G P
Sbjct: 176 IIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD-EKCDVWSTGVILYILLSGCPP 232
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 12/58 (20%)
Query: 282 VADFGMTMHLYCDSSNL-----------TLLAGTYGYEKCDVYSFGVVALEILMGRQP 328
+ DFG++ H +L GTY EKCDV+S GV+ +L G P
Sbjct: 170 IIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD-EKCDVWSTGVILYILLSGCPP 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,429,708
Number of Sequences: 62578
Number of extensions: 446526
Number of successful extensions: 1595
Number of sequences better than 100.0: 103
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1406
Number of HSP's gapped (non-prelim): 193
length of query: 408
length of database: 14,973,337
effective HSP length: 101
effective length of query: 307
effective length of database: 8,652,959
effective search space: 2656458413
effective search space used: 2656458413
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)