BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037628
(166 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C0RGK0|GLND_BRUMB [Protein-PII] uridylyltransferase OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=glnD PE=3 SV=1
Length = 934
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 73 DADNEG--IVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130
DAD +G +V K + E+ D P+LLS ++ + G NI +A +F+T+DG
Sbjct: 715 DADQQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDG 774
Query: 131 YSLDVFVV 138
+LD ++
Sbjct: 775 RALDTILI 782
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 99 VDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD--GWPVEGSVLSPNV 152
+D+P LLS+L+ L+SD+ L+I AH+ + + +V D G + + N+
Sbjct: 854 LDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNI 909
>sp|Q8YES3|GLND_BRUME [Protein-PII] uridylyltransferase OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=glnD PE=3 SV=1
Length = 934
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 73 DADNEG--IVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130
DAD +G +V K + E+ D P+LLS ++ + G NI +A +F+T+DG
Sbjct: 715 DADQQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDG 774
Query: 131 YSLDVFVV 138
+LD ++
Sbjct: 775 RALDTILI 782
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 99 VDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD--GWPVEGSVLSPNV 152
+D+P LLS+L+ L+SD+ L+I AH+ + + +V D G + + N+
Sbjct: 854 LDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNI 909
>sp|Q57FN0|GLND_BRUAB [Protein-PII] uridylyltransferase OS=Brucella abortus biovar 1
(strain 9-941) GN=glnD PE=3 SV=1
Length = 934
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 73 DADNEG--IVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130
DAD +G +V K + E+ D P+LLS ++ + G NI +A +F+T+DG
Sbjct: 715 DADQQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDG 774
Query: 131 YSLDVFVV 138
+LD ++
Sbjct: 775 RALDTILI 782
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 99 VDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD--GWPVEGSVLSPNV 152
+D+P LLS+L+ L+SD+ L+I AH+ + + +V D G + + N+
Sbjct: 854 LDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNI 909
>sp|Q2YNZ1|GLND_BRUA2 [Protein-PII] uridylyltransferase OS=Brucella abortus (strain 2308)
GN=glnD PE=3 SV=1
Length = 934
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 73 DADNEG--IVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130
DAD +G +V K + E+ D P+LLS ++ + G NI +A +F+T+DG
Sbjct: 715 DADQQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDG 774
Query: 131 YSLDVFVV 138
+LD ++
Sbjct: 775 RALDTILI 782
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 99 VDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD--GWPVEGSVLSPNV 152
+D+P LLS+L+ L+SD+ L+I AH+ + + +V D G + + N+
Sbjct: 854 LDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNI 909
>sp|B2S8D8|GLND_BRUA1 [Protein-PII] uridylyltransferase OS=Brucella abortus (strain S19)
GN=glnD PE=3 SV=1
Length = 934
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 73 DADNEG--IVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130
DAD +G +V K + E+ D P+LLS ++ + G NI +A +F+T+DG
Sbjct: 715 DADQQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDG 774
Query: 131 YSLDVFVV 138
+LD ++
Sbjct: 775 RALDTILI 782
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 99 VDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD--GWPVEGSVLSPNV 152
+D+P LLS+L+ L+SD+ L+I AH+ + + +V D G + + N+
Sbjct: 854 LDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNI 909
>sp|A5VN81|GLND_BRUO2 [Protein-PII] uridylyltransferase OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=glnD PE=3 SV=1
Length = 934
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 73 DADNEG--IVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130
DAD +G +V K + E+ D P+LLS ++ + G NI +A +F+T+DG
Sbjct: 715 DADQQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDG 774
Query: 131 YSLDVFVV 138
+LD ++
Sbjct: 775 RALDTILI 782
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 99 VDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD--GWPVEGSVLSPNV 152
+D+P LLS+L+ L+SD+ L+I AH+ + + +V D G + + N+
Sbjct: 854 LDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNI 909
>sp|B0CIQ3|GLND_BRUSI [Protein-PII] uridylyltransferase OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=glnD PE=3 SV=1
Length = 934
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 73 DADNEG--IVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130
DAD +G +V K + E+ D P+LLS ++ + G NI +A +F+T+DG
Sbjct: 715 DADQQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDG 774
Query: 131 YSLDVFVV 138
+LD ++
Sbjct: 775 RALDTILI 782
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 99 VDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD--GWPVEGSVLSPNV 152
+D+P LLS+L+ L+SD+ L+I AH+ + + +V D G + + N+
Sbjct: 854 LDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNI 909
>sp|Q8EGH8|GLND_SHEON [Protein-PII] uridylyltransferase OS=Shewanella oneidensis (strain
MR-1) GN=glnD PE=3 SV=1
Length = 861
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPV 143
E+ D+PKL + + A+L + +N+ +A++ ++ D Y+LD FV+ DG PV
Sbjct: 676 ELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVILEQDGEPV 729
>sp|Q8G312|GLND_BRUSU [Protein-PII] uridylyltransferase OS=Brucella suis biovar 1 (strain
1330) GN=glnD PE=3 SV=1
Length = 934
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 73 DADNEG--IVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130
DAD +G +V K + E+ D P+LLS ++ + G NI +A +F+T++G
Sbjct: 715 DADQQGRALVTMAKPHAFEAVTEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSNG 774
Query: 131 YSLDVFVV 138
+LD ++
Sbjct: 775 RALDTILI 782
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 99 VDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD--GWPVEGSVLSPNV 152
+D+P LLS+L+ L+SD+ L+I AH+ + + +V D G + + N+
Sbjct: 854 LDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKISNATRQGNI 909
>sp|Q2RNG2|GLND_RHORT [Protein-PII] uridylyltransferase OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=glnD PE=3 SV=1
Length = 936
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 79 IVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV 138
++P +R + EV+ +T D P L S+++ ++ G+NI +A + + +DG +LD+F V
Sbjct: 718 VLPDPERA----VSEVLVATDDHPGLFSKIAGAMALAGVNILDAKITTMSDGGALDIFTV 773
>sp|Q3J5H6|GLND_RHOS4 [Protein-PII] uridylyltransferase OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=glnD PE=3 SV=1
Length = 930
Score = 39.7 bits (91), Expect = 0.010, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 96 FSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEGSVL 148
F+ D P + S+L+ L+ +G N+ +A ++T DGY+ VF + +G P E S L
Sbjct: 745 FALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPYEISRL 800
>sp|Q98C27|GLND_RHILO [Protein-PII] uridylyltransferase OS=Rhizobium loti (strain
MAFF303099) GN=glnD PE=3 SV=1
Length = 933
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 73 DADNEGIVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYS 132
DA + + K + + E+ D P+LLS ++ G NI +A +F+T DG +
Sbjct: 717 DAAGKKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACVGAGGNIVDAQIFTTADGRA 776
Query: 133 LDVFVV 138
LD ++
Sbjct: 777 LDTILI 782
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 99 VDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYS-LDVFVV 138
+D+P LLS+++ LSD+ L+I AH+ TT G +D F V
Sbjct: 854 LDRPGLLSEITGTLSDLSLDIASAHI--TTFGEKVIDTFYV 892
>sp|P41393|GLND_KLEOX [Protein-PII] uridylyltransferase OS=Klebsiella oxytoca GN=glnD
PE=3 SV=1
Length = 887
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + +SA L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 706 EIFIWSPDRPYLFAAVSAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 761
>sp|Q5LWE5|GLND_RUEPO [Protein-PII] uridylyltransferase OS=Ruegeria pomeroyi (strain ATCC
700808 / DSM 15171 / DSS-3) GN=glnD PE=3 SV=1
Length = 908
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 96 FSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEGSVL 148
F+ D P + S+++ L+ +G N+ +A ++T DGY D F + +G P E + L
Sbjct: 722 FAMADHPGIFSRMAGALALVGANVVDARSYTTKDGYVTDAFWIQDAEGHPYEAARL 777
>sp|P62223|GLND_RHOPA [Protein-PII] uridylyltransferase OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=glnD PE=3 SV=1
Length = 929
Score = 38.1 bits (87), Expect = 0.023, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 87 ELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV 138
E + E+ VD P LLS ++ + G NI +A +++TTDG +LD +
Sbjct: 730 EARAVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISI 781
Score = 33.5 bits (75), Expect = 0.58, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 97 STVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV 138
S +D+P LL QL+ +S + LNI AHV +T + DVF V
Sbjct: 853 SGLDRPGLLYQLTTAISKLNLNIASAHV-ATFGERARDVFYV 893
>sp|A6WV84|GLND_OCHA4 [Protein-PII] uridylyltransferase OS=Ochrobactrum anthropi (strain
ATCC 49188 / DSM 6882 / NCTC 12168) GN=glnD PE=3 SV=1
Length = 934
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 73 DADNEGIVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYS 132
D + + K + E+ D P+LLS ++ + G NI +A +F+T DG +
Sbjct: 717 DRNERALATMAKPHTFEAVTEITVLAPDHPRLLSIITGACAAAGANIVDAQIFTTGDGRA 776
Query: 133 LDVFVV 138
LD ++
Sbjct: 777 LDTILI 782
Score = 33.1 bits (74), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 99 VDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYS-LDVFVV 138
+D+P LLS+L+ L+SD+ L+I AH+ TT G +D F V
Sbjct: 854 LDRPGLLSELTGLISDLSLDIASAHI--TTFGEKVIDSFYV 892
>sp|A9MPJ5|GLND_SALAR [Protein-PII] uridylyltransferase OS=Salmonella arizonae (strain
ATCC BAA-731 / CDC346-86 / RSK2980) GN=glnD PE=3 SV=1
Length = 890
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEGSVLSPN 151
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V +GS L+P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIV--LEPDGSPLAPD 765
>sp|Q47F95|GLND_DECAR [Protein-PII] uridylyltransferase OS=Dechloromonas aromatica
(strain RCB) GN=glnD PE=3 SV=1
Length = 852
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 75 DNEGIVPSQKRQELVPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLD 134
+N+ +V ++ QE + +V+ T D+P L +++ + G +I +A + +T GY+LD
Sbjct: 659 NNQPVVRARPNQEGDGLQVMVY-TQDQPDLFARIVGFFARAGYSIVDAKIHTTAHGYALD 717
Query: 135 VFVV 138
FVV
Sbjct: 718 SFVV 721
>sp|Q32JU2|GLND_SHIDS [Protein-PII] uridylyltransferase OS=Shigella dysenteriae serotype
1 (strain Sd197) GN=glnD PE=3 SV=1
Length = 890
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|Q0T842|GLND_SHIF8 [Protein-PII] uridylyltransferase OS=Shigella flexneri serotype 5b
(strain 8401) GN=glnD PE=3 SV=1
Length = 890
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|B1LGW8|GLND_ECOSM [Protein-PII] uridylyltransferase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=glnD PE=3 SV=1
Length = 890
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|B7N834|GLND_ECOLU [Protein-PII] uridylyltransferase OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|B7LWA6|GLND_ESCF3 [Protein-PII] uridylyltransferase OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|Q0TLG6|GLND_ECOL5 [Protein-PII] uridylyltransferase OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|B7NIC8|GLND_ECO7I [Protein-PII] uridylyltransferase OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|A8ALC3|GLND_CITK8 [Protein-PII] uridylyltransferase OS=Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|Q3Z5J1|GLND_SHISS [Protein-PII] uridylyltransferase OS=Shigella sonnei (strain Ss046)
GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|Q83MD4|GLND_SHIFL [Protein-PII] uridylyltransferase OS=Shigella flexneri GN=glnD PE=3
SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|Q1RG23|GLND_ECOUT [Protein-PII] uridylyltransferase OS=Escherichia coli (strain UTI89
/ UPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|Q8CY19|GLND_ECOL6 [Protein-PII] uridylyltransferase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|A1A7L1|GLND_ECOK1 [Protein-PII] uridylyltransferase OS=Escherichia coli O1:K1 / APEC
GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|B7MP27|GLND_ECO81 [Protein-PII] uridylyltransferase OS=Escherichia coli O81 (strain
ED1a) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|B7MBE8|GLND_ECO45 [Protein-PII] uridylyltransferase OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|Q325X3|GLND_SHIBS [Protein-PII] uridylyltransferase OS=Shigella boydii serotype 4
(strain Sb227) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|B6HZE1|GLND_ECOSE [Protein-PII] uridylyltransferase OS=Escherichia coli (strain SE11)
GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|A7ZWB3|GLND_ECOHS [Protein-PII] uridylyltransferase OS=Escherichia coli O9:H4 (strain
HS) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|B7M1A6|GLND_ECO8A [Protein-PII] uridylyltransferase OS=Escherichia coli O8 (strain
IAI1) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|B7LGM7|GLND_ECO55 [Protein-PII] uridylyltransferase OS=Escherichia coli (strain 55989
/ EAEC) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|B7UIL2|GLND_ECO27 [Protein-PII] uridylyltransferase OS=Escherichia coli O127:H6
(strain E2348/69 / EPEC) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|A7ZHQ7|GLND_ECO24 [Protein-PII] uridylyltransferase OS=Escherichia coli O139:H28
(strain E24377A / ETEC) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|Q57T41|GLND_SALCH [Protein-PII] uridylyltransferase OS=Salmonella choleraesuis
(strain SC-B67) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPV 143
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPL 762
>sp|B5Z0E5|GLND_ECO5E [Protein-PII] uridylyltransferase OS=Escherichia coli O157:H7
(strain EC4115 / EHEC) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|Q8X8Y6|GLND_ECO57 [Protein-PII] uridylyltransferase OS=Escherichia coli O157:H7
GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPVEG 145
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSA 764
>sp|Q8Z9A7|GLND_SALTI [Protein-PII] uridylyltransferase OS=Salmonella typhi GN=glnD PE=3
SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPV 143
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPL 762
>sp|P23679|GLND_SALTY [Protein-PII] uridylyltransferase OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=glnD PE=3 SV=3
Length = 890
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPV 143
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPL 762
>sp|B4TXR9|GLND_SALSV [Protein-PII] uridylyltransferase OS=Salmonella schwarzengrund
(strain CVM19633) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPV 143
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPL 762
>sp|B4TK42|GLND_SALHS [Protein-PII] uridylyltransferase OS=Salmonella heidelberg (strain
SL476) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPV 143
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPL 762
>sp|B5RHF2|GLND_SALG2 [Protein-PII] uridylyltransferase OS=Salmonella gallinarum (strain
287/91 / NCTC 13346) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPV 143
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPL 762
>sp|B5R3H9|GLND_SALEP [Protein-PII] uridylyltransferase OS=Salmonella enteritidis PT4
(strain P125109) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPV 143
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPL 762
>sp|B5FJ14|GLND_SALDC [Protein-PII] uridylyltransferase OS=Salmonella dublin (strain
CT_02021853) GN=glnD PE=3 SV=1
Length = 890
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVV---DGWPV 143
E+ + D+P L + + A L L++ +A +F+T DG ++D F+V DG P+
Sbjct: 709 EIFIWSPDRPYLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPL 762
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,271,349
Number of Sequences: 539616
Number of extensions: 2534653
Number of successful extensions: 6668
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 6435
Number of HSP's gapped (non-prelim): 245
length of query: 166
length of database: 191,569,459
effective HSP length: 109
effective length of query: 57
effective length of database: 132,751,315
effective search space: 7566824955
effective search space used: 7566824955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)