Query 037628
Match_columns 166
No_of_seqs 207 out of 816
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 04:05:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037628.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037628hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.3 4.1E-12 1.4E-16 101.0 6.0 70 91-161 5-82 (195)
2 1u8s_A Glycine cleavage system 99.1 4.2E-11 1.4E-15 94.2 4.0 72 91-163 6-81 (192)
3 3nrb_A Formyltetrahydrofolate 99.1 1.1E-10 3.6E-15 98.9 6.1 72 91-162 7-83 (287)
4 3lou_A Formyltetrahydrofolate 99.0 9.2E-11 3.2E-15 99.5 3.8 72 91-162 10-90 (292)
5 3obi_A Formyltetrahydrofolate 99.0 1.6E-10 5.4E-15 97.9 4.5 72 91-162 6-84 (288)
6 3o1l_A Formyltetrahydrofolate 99.0 1.6E-10 5.5E-15 98.5 4.2 73 90-162 21-100 (302)
7 3n0v_A Formyltetrahydrofolate 99.0 2.1E-10 7.2E-15 97.0 4.4 72 91-162 8-85 (286)
8 2nyi_A Unknown protein; protei 99.0 2E-10 7E-15 91.2 3.4 75 89-163 91-174 (195)
9 3p96_A Phosphoserine phosphata 98.9 5.6E-10 1.9E-14 96.3 4.3 73 91-163 12-89 (415)
10 1zpv_A ACT domain protein; str 98.8 3.3E-09 1.1E-13 73.4 5.2 72 91-163 5-81 (91)
11 1u8s_A Glycine cleavage system 98.7 8.9E-09 3.1E-13 80.8 5.4 75 89-163 91-177 (192)
12 2ko1_A CTR148A, GTP pyrophosph 98.0 2.4E-05 8.1E-10 52.9 7.6 48 91-139 5-52 (88)
13 2f1f_A Acetolactate synthase i 97.5 0.00026 8.8E-09 55.3 7.3 49 92-140 4-53 (164)
14 2pc6_A Probable acetolactate s 97.3 0.00052 1.8E-08 53.7 6.5 49 92-140 5-54 (165)
15 1y7p_A Hypothetical protein AF 97.0 0.0013 4.5E-08 53.9 6.6 50 92-141 5-58 (223)
16 2fgc_A Acetolactate synthase, 97.0 0.0027 9.1E-08 51.0 7.8 50 91-140 29-79 (193)
17 2jhe_A Transcription regulator 96.3 0.0058 2E-07 45.3 5.5 37 93-131 2-38 (190)
18 2f06_A Conserved hypothetical 96.3 0.01 3.5E-07 43.8 6.7 39 91-129 6-44 (144)
19 2f06_A Conserved hypothetical 96.3 0.016 5.6E-07 42.6 7.7 47 92-139 73-119 (144)
20 1sc6_A PGDH, D-3-phosphoglycer 95.4 0.057 1.9E-06 47.1 8.4 51 90-141 330-380 (404)
21 1ygy_A PGDH, D-3-phosphoglycer 94.9 0.097 3.3E-06 46.9 8.7 52 90-141 453-505 (529)
22 3k5p_A D-3-phosphoglycerate de 92.8 0.36 1.2E-05 42.5 8.1 49 90-139 342-390 (416)
23 2re1_A Aspartokinase, alpha an 90.3 0.63 2.1E-05 35.1 6.1 52 89-140 23-75 (167)
24 3p96_A Phosphoserine phosphata 88.6 1.4 4.7E-05 37.3 7.7 47 89-135 99-146 (415)
25 3mtj_A Homoserine dehydrogenas 84.0 1.1 3.9E-05 39.5 4.8 37 90-126 358-394 (444)
26 2dtj_A Aspartokinase; protein- 83.0 1.3 4.6E-05 33.7 4.3 36 89-124 13-49 (178)
27 4go7_X Aspartokinase; transfer 80.4 1.5 5.2E-05 34.7 3.9 55 87-141 31-88 (200)
28 2dt9_A Aspartokinase; protein- 80.2 1.6 5.3E-05 32.8 3.7 52 89-140 14-68 (167)
29 2qmx_A Prephenate dehydratase; 79.9 4.2 0.00014 33.8 6.6 41 90-130 199-239 (283)
30 3mwb_A Prephenate dehydratase; 79.9 5.9 0.0002 33.4 7.6 41 90-130 200-241 (313)
31 2re1_A Aspartokinase, alpha an 79.4 2.2 7.7E-05 32.0 4.4 33 89-121 101-136 (167)
32 2qmw_A PDT, prephenate dehydra 78.4 5.4 0.00018 32.9 6.7 41 90-130 185-228 (267)
33 2dt9_A Aspartokinase; protein- 76.2 2.8 9.7E-05 31.3 4.1 32 89-120 93-127 (167)
34 2dtj_A Aspartokinase; protein- 75.4 2.2 7.7E-05 32.4 3.4 33 89-121 93-128 (178)
35 3s1t_A Aspartokinase; ACT doma 72.9 11 0.00039 28.7 6.9 53 90-142 15-70 (181)
36 3luy_A Probable chorismate mut 68.5 24 0.00083 29.8 8.6 50 90-139 205-256 (329)
37 3ab4_A Aspartokinase; aspartat 67.1 20 0.00069 30.7 7.9 53 89-141 262-317 (421)
38 1phz_A Protein (phenylalanine 59.8 16 0.00054 32.4 5.9 42 89-130 32-73 (429)
39 3s1t_A Aspartokinase; ACT doma 54.4 10 0.00035 29.0 3.4 35 89-123 94-131 (181)
40 4go7_X Aspartokinase; transfer 43.6 8.8 0.0003 30.2 1.5 33 90-122 114-149 (200)
41 3mah_A Aspartokinase; aspartat 42.4 12 0.00042 27.5 2.1 32 90-121 17-51 (157)
42 1zhv_A Hypothetical protein AT 39.1 15 0.00053 27.1 2.2 30 92-121 63-95 (134)
43 3ab4_A Aspartokinase; aspartat 36.8 32 0.0011 29.4 4.1 31 90-120 343-376 (421)
44 1zvp_A Hypothetical protein VC 36.6 21 0.00071 26.4 2.5 32 90-121 70-104 (133)
45 3c1m_A Probable aspartokinase; 35.8 54 0.0019 28.6 5.5 35 90-124 317-354 (473)
46 3l76_A Aspartokinase; alloster 31.2 42 0.0014 30.4 4.1 53 88-140 441-499 (600)
47 3tvi_A Aspartokinase; structur 22.9 1E+02 0.0036 26.8 5.0 35 90-124 373-410 (446)
48 3c1m_A Probable aspartokinase; 22.0 61 0.0021 28.2 3.3 30 91-120 404-436 (473)
49 3tvi_A Aspartokinase; structur 21.7 69 0.0024 27.9 3.6 32 90-121 297-331 (446)
50 2cdq_A Aspartokinase; aspartat 20.4 91 0.0031 27.7 4.1 33 90-122 340-375 (510)
51 2wvf_A Hpnikr, putative nickel 20.2 2.6E+02 0.0089 20.5 8.3 50 91-141 66-116 (148)
52 1q5y_A NIKR, nickel responsive 20.1 2E+02 0.0067 19.0 6.6 50 91-141 6-56 (85)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.27 E-value=4.1e-12 Score=101.01 Aligned_cols=70 Identities=16% Similarity=0.070 Sum_probs=56.1
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCCeEEEEEEEcCCCC--------CCCCCCccccceeeEEEE
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPV--------EGSVLSPNVADFAMLWSG 161 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg~~ldvF~V~~~~~--------~~~~f~~~a~~f~m~~~~ 161 (166)
.++|+|+|+||||||++||++|+++|+||++|+++++.++|+|.+ .|..+.. .+..+.+.++++.|.|.+
T Consensus 5 ~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~-~v~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 82 (195)
T 2nyi_A 5 SFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIV-LVSLNAKDGKLIQSALESALPGFQISTRRASSV 82 (195)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEE-EEEESSSSSHHHHHHHHHHSTTCEEEEEECCCC
T ss_pred EEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEE-EEEecCccchhHHHHHHHHHHHHHHhcCCeEEE
Confidence 479999999999999999999999999999999999888898844 4432211 133466677788898876
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.10 E-value=4.2e-11 Score=94.16 Aligned_cols=72 Identities=15% Similarity=0.242 Sum_probs=55.2
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCCeEEEEEEEcCCC----CCCCCCCccccceeeEEEEEE
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWP----VEGSVLSPNVADFAMLWSGYR 163 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg~~ldvF~V~~~~----~~~~~f~~~a~~f~m~~~~~~ 163 (166)
.++|+|+|+||||||++||++|+++|+||.+++++++.+++++ .+.|..+. ....++.+.++++.|.|.+.+
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~-~~~v~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 81 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTL-LMLISGSPSNITRVETTLPLLGQQHDLITMMKR 81 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEECHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEE-EEEEecCCCCHHHHHHHHHHHHHhcCCEEEEEe
Confidence 4789999999999999999999999999999999997777877 44443321 112234445567789998754
No 3
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=99.08 E-value=1.1e-10 Score=98.90 Aligned_cols=72 Identities=21% Similarity=0.246 Sum_probs=58.9
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecC-CC-eEEEE-EEEcCC--CCCCCCCCccccceeeEEEEE
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTT-DG-YSLDV-FVVDGW--PVEGSVLSPNVADFAMLWSGY 162 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~-dg-~~ldv-F~V~~~--~~~~~~f~~~a~~f~m~~~~~ 162 (166)
.+.|+++|+|||||+++||++|+++|+||.++++|++. .| |+|++ |..... ...+.+|++.+++|.|+|++.
T Consensus 7 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~L~~~f~~la~~~~m~~~l~ 83 (287)
T 3nrb_A 7 QYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPVAGVNDFNSAFGKVVEKYNAEWWFR 83 (287)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC---CHHHHHHHHHHGGGTCEEEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCCCCHHHHHHHHHHHHHHcCCeeEee
Confidence 57899999999999999999999999999999999765 45 77777 665331 223455777899999999987
No 4
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=99.03 E-value=9.2e-11 Score=99.53 Aligned_cols=72 Identities=15% Similarity=0.220 Sum_probs=58.8
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecC-CC-eEEEE-EEEc--C--C--CCCCCCCCccccceeeEEEE
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTT-DG-YSLDV-FVVD--G--W--PVEGSVLSPNVADFAMLWSG 161 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~-dg-~~ldv-F~V~--~--~--~~~~~~f~~~a~~f~m~~~~ 161 (166)
.+.|+++|+|||||+++||++|+++|+||.+++++++. .| |++++ |... + . ...+.+|++.+++|.|+|++
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~~~L~~~f~~la~~~~m~~~l 89 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADALRVDALRREFEPIAERFRMQWAI 89 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----CCHHHHHHHHHHHHHHHTCEEEE
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCCCHHHHHHHHHHHHHhcCcEEEe
Confidence 47899999999999999999999999999999999765 34 77777 7765 2 1 11245577788999999998
Q ss_pred E
Q 037628 162 Y 162 (166)
Q Consensus 162 ~ 162 (166)
.
T Consensus 90 ~ 90 (292)
T 3lou_A 90 H 90 (292)
T ss_dssp E
T ss_pred e
Confidence 6
No 5
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=99.02 E-value=1.6e-10 Score=97.87 Aligned_cols=72 Identities=24% Similarity=0.316 Sum_probs=59.0
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecC-CC-eEEEE-EEEcCCC----CCCCCCCccccceeeEEEEE
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTT-DG-YSLDV-FVVDGWP----VEGSVLSPNVADFAMLWSGY 162 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~-dg-~~ldv-F~V~~~~----~~~~~f~~~a~~f~m~~~~~ 162 (166)
.+.|++.|+|||||+++||++|+++|+||.++++|++. .| |++++ |.+.+.. ..+.+|++.+++|.|+|++.
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~~L~~~f~~la~~~~m~~~l~ 84 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLASLRTGFGVIAAKFTMGWHMR 84 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCCCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCCCHHHHHHHHHHHHHHcCCEEEee
Confidence 37899999999999999999999999999999999765 45 77777 7765421 12445777889999999986
No 6
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=99.01 E-value=1.6e-10 Score=98.53 Aligned_cols=73 Identities=19% Similarity=0.265 Sum_probs=59.2
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecC-CC-eEEEE-EEEcCC----CCCCCCCCccccceeeEEEEE
Q 037628 90 PIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTT-DG-YSLDV-FVVDGW----PVEGSVLSPNVADFAMLWSGY 162 (166)
Q Consensus 90 ~~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~-dg-~~ldv-F~V~~~----~~~~~~f~~~a~~f~m~~~~~ 162 (166)
..+.|+++|+|||||+++||++|+++|+||.+++++++. .| |+|++ |...+. ...+.+|++.+++|.|+|++.
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~~~~~~L~~~l~~la~~l~m~~~l~ 100 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLPFDLDGFREAFTPIAEEFSMDWRIT 100 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSSSCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCCCCHHHHHHHHHHHHHHhCCeeeec
Confidence 357899999999999999999999999999999999864 45 77777 765432 112345777889999999986
No 7
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=98.99 E-value=2.1e-10 Score=97.01 Aligned_cols=72 Identities=14% Similarity=0.105 Sum_probs=58.2
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecC-CC-eEEEE-EEEcCC---CCCCCCCCccccceeeEEEEE
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTT-DG-YSLDV-FVVDGW---PVEGSVLSPNVADFAMLWSGY 162 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~-dg-~~ldv-F~V~~~---~~~~~~f~~~a~~f~m~~~~~ 162 (166)
.+.|++.|+|||||+++||++|+++|+||.+++++++. .| |++++ |...+. ...+.+|++.++++.|+|++.
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~~L~~~f~~la~~l~m~~~l~ 85 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPDDFDEAGFRAGLAERSEAFGMAFELT 85 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCSSCCHHHHHHHHHHHHGGGTCEEEEE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCCCCCHHHHHHHHHHHHHHcCCEEEee
Confidence 47899999999999999999999999999999999765 34 77777 665331 112345677889999999986
No 8
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=98.98 E-value=2e-10 Score=91.15 Aligned_cols=75 Identities=15% Similarity=0.042 Sum_probs=58.7
Q ss_pred CCeEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecC-----CC-eEEEE-EEEcCCC--CCCCCCCccccceeeEE
Q 037628 89 VPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTT-----DG-YSLDV-FVVDGWP--VEGSVLSPNVADFAMLW 159 (166)
Q Consensus 89 ~~~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~-----dg-~~ldv-F~V~~~~--~~~~~f~~~a~~f~m~~ 159 (166)
...+.|+|.|+|||||+++||++|+++|+||.++++++.. .+ |+++. |.+.+.. ....+|.+.++++.|+|
T Consensus 91 ~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~~~~~~~l~~~l~~~a~~l~~di 170 (195)
T 2nyi_A 91 TREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPFPLYQEVVTALSRVEEEFGVDI 170 (195)
T ss_dssp EEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEGGGHHHHHHHHHHHHHHHTCEE
T ss_pred CcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcCCCccHHHHHHHHHHHHHcCeEE
Confidence 3468999999999999999999999999999999999875 23 66655 6654211 12345666788999999
Q ss_pred EEEE
Q 037628 160 SGYR 163 (166)
Q Consensus 160 ~~~~ 163 (166)
++..
T Consensus 171 ~~~~ 174 (195)
T 2nyi_A 171 DLEE 174 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9865
No 9
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.92 E-value=5.6e-10 Score=96.34 Aligned_cols=73 Identities=16% Similarity=0.161 Sum_probs=60.0
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCCeEEEE-EEEcCC----CCCCCCCCccccceeeEEEEEE
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDV-FVVDGW----PVEGSVLSPNVADFAMLWSGYR 163 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg~~ldv-F~V~~~----~~~~~~f~~~a~~f~m~~~~~~ 163 (166)
...|+++|+|||||+++||++|+++|+||.+++++...+-|++++ |.+.+. ...+.+|++.++++.|+|++.+
T Consensus 12 ~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 89 (415)
T 3p96_A 12 SVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADVADGPALRHDVEAAIRKVGLDVSIER 89 (415)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCcCCHHHHHHHHHHHHHHcCeEEEEEE
Confidence 478999999999999999999999999999999987554488877 776532 1224557778899999999875
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.84 E-value=3.3e-09 Score=73.39 Aligned_cols=72 Identities=13% Similarity=0.095 Sum_probs=54.6
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCCe-EEEE-EEEcCCCC---CCCCCCccccceeeEEEEEE
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGY-SLDV-FVVDGWPV---EGSVLSPNVADFAMLWSGYR 163 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg~-~ldv-F~V~~~~~---~~~~f~~~a~~f~m~~~~~~ 163 (166)
.+.|+|.|+||||++++|+++|+++|+||.+.++++.. |. .+.+ +.+.+... ....+.+.++++.|+|++..
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~-~~~~~~i~v~~~~~~~l~~l~~~L~~~~~~~~~~~~~~~ 81 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLD-EYFTMMAVVSSDEKQDFTYLRNEFEAFGQTLNVKINIQS 81 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEET-TEEEEEEEEEESSCCCHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEc-CEEEEEEEEEeCCCCCHHHHHHHHHHHHHHcCCEEEEee
Confidence 47899999999999999999999999999999998765 64 4444 55544211 12335556778889999864
No 11
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=98.74 E-value=8.9e-09 Score=80.77 Aligned_cols=75 Identities=11% Similarity=0.050 Sum_probs=57.8
Q ss_pred CCeEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecC-------CC-eEEEE-EEEcCCC---CCCCCCCcccccee
Q 037628 89 VPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTT-------DG-YSLDV-FVVDGWP---VEGSVLSPNVADFA 156 (166)
Q Consensus 89 ~~~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~-------dg-~~ldv-F~V~~~~---~~~~~f~~~a~~f~ 156 (166)
...+.|++.|+||||++++|+++|+++|+||.++++++.. .+ |+++. |.+.+.. ..+.+|.+.+++++
T Consensus 91 ~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 170 (192)
T 1u8s_A 91 AYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALCTALD 170 (192)
T ss_dssp SEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCCCCCHHHHHHHHHHHHHHhC
Confidence 3468999999999999999999999999999999999864 23 55554 6553221 12345667788999
Q ss_pred eEEEEEE
Q 037628 157 MLWSGYR 163 (166)
Q Consensus 157 m~~~~~~ 163 (166)
|+|++..
T Consensus 171 ~~~~~~~ 177 (192)
T 1u8s_A 171 VQGSLNF 177 (192)
T ss_dssp CEEEEEE
T ss_pred ceEEEEE
Confidence 9999875
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.01 E-value=2.4e-05 Score=52.88 Aligned_cols=48 Identities=17% Similarity=0.212 Sum_probs=39.2
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCCeEEEEEEEc
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD 139 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg~~ldvF~V~ 139 (166)
.+.|.|.++|+||++++|+++|++.|+||.+..+.+.. +.+...|.+.
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~-~~~~~~i~v~ 52 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKD-GIFTCNLMIF 52 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECS-SEEEEEEEEE
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcC-CEEEEEEEEE
Confidence 46789999999999999999999999999999997644 4444445554
No 13
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.51 E-value=0.00026 Score=55.31 Aligned_cols=49 Identities=24% Similarity=0.214 Sum_probs=42.9
Q ss_pred EEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCC-CeEEEEEEEcC
Q 037628 92 HEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTD-GYSLDVFVVDG 140 (166)
Q Consensus 92 ~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~d-g~~ldvF~V~~ 140 (166)
+.|.+.+.|+||+|++|+++|+..|.||.+..+..+.+ |...-+|.+++
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~ 53 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG 53 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec
Confidence 78999999999999999999999999999999987775 66655677763
No 14
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.28 E-value=0.00052 Score=53.68 Aligned_cols=49 Identities=29% Similarity=0.363 Sum_probs=42.2
Q ss_pred EEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCC-CeEEEEEEEcC
Q 037628 92 HEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTD-GYSLDVFVVDG 140 (166)
Q Consensus 92 ~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~d-g~~ldvF~V~~ 140 (166)
+.|.+.+.|+||++++|+++|+..|.||.+..+..+.+ |..--++.|.+
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~ 54 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG 54 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec
Confidence 78999999999999999999999999999999987775 65555577753
No 15
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=97.01 E-value=0.0013 Score=53.86 Aligned_cols=50 Identities=24% Similarity=0.357 Sum_probs=39.8
Q ss_pred EEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecC----CCeEEEEEEEcCC
Q 037628 92 HEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTT----DGYSLDVFVVDGW 141 (166)
Q Consensus 92 ~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~----dg~~ldvF~V~~~ 141 (166)
..|.|.+.||||+++.|+++|++++.||...++.+.. +|.+.-.+.+++.
T Consensus 5 VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~ 58 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGG 58 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSS
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCC
Confidence 6899999999999999999999999999999998876 7766544887654
No 16
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.96 E-value=0.0027 Score=50.97 Aligned_cols=50 Identities=28% Similarity=0.397 Sum_probs=42.4
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCC-CeEEEEEEEcC
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTD-GYSLDVFVVDG 140 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~d-g~~ldvF~V~~ 140 (166)
-+.|.|...|+||.|++|+++|+..|+||.+-.+..+.+ |..--+++|++
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g 79 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKG 79 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEE
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEEC
Confidence 378999999999999999999999999999999887666 55444577764
No 17
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.34 E-value=0.0058 Score=45.29 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=33.4
Q ss_pred EEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCCe
Q 037628 93 EVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGY 131 (166)
Q Consensus 93 eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg~ 131 (166)
.|.|.|.||+||++.|+.+|+..++||..+.+.+ +|.
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~--~g~ 38 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP--IGR 38 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET--TTE
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec--CCE
Confidence 5889999999999999999999999999999954 375
No 18
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.31 E-value=0.01 Score=43.75 Aligned_cols=39 Identities=13% Similarity=0.249 Sum_probs=34.5
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCC
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTD 129 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~d 129 (166)
.++|++..+|+||.++++++.|++.|+||..-.+..+.+
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~ 44 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENAD 44 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSS
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCC
Confidence 478999999999999999999999999999877765555
No 19
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.28 E-value=0.016 Score=42.59 Aligned_cols=47 Identities=21% Similarity=0.192 Sum_probs=35.9
Q ss_pred EEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCCeEEEEEEEc
Q 037628 92 HEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD 139 (166)
Q Consensus 92 ~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg~~ldvF~V~ 139 (166)
..+.+-.+|+||.+++++.+|+++|+||.....+. .++...-+|.++
T Consensus 73 svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~-~~~~~~~~i~~~ 119 (144)
T 2f06_A 73 DVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA-NNNVANVVIRPS 119 (144)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE-ETTEEEEEEEES
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc-cCCcEEEEEEeC
Confidence 35677899999999999999999999998777763 344444445554
No 20
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=95.36 E-value=0.057 Score=47.11 Aligned_cols=51 Identities=14% Similarity=0.249 Sum_probs=44.9
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCCeEEEEEEEcCC
Q 037628 90 PIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGW 141 (166)
Q Consensus 90 ~~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg~~ldvF~V~~~ 141 (166)
+...|++.-+|+||.+++|+.+|+++|+||...+..+ ..+.++-++.++..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r-~g~~A~~vidvD~~ 380 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT-SAQMGYVVIDIEAD 380 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE-CSSEEEEEEEEECC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC-CCCEEEEEEEcCCC
Confidence 4678999999999999999999999999999988876 77788888888764
No 21
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=94.90 E-value=0.097 Score=46.88 Aligned_cols=52 Identities=21% Similarity=0.289 Sum_probs=44.8
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecC-CCeEEEEEEEcCC
Q 037628 90 PIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTT-DGYSLDVFVVDGW 141 (166)
Q Consensus 90 ~~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~-dg~~ldvF~V~~~ 141 (166)
.++.|.+.-+|+||.+++|++.|.++|+||-..++.... +|..+-++.+++.
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~ 505 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD 505 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC
Confidence 468899999999999999999999999999999997654 4477777887764
No 22
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=92.81 E-value=0.36 Score=42.45 Aligned_cols=49 Identities=18% Similarity=0.242 Sum_probs=39.5
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCCeEEEEEEEc
Q 037628 90 PIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD 139 (166)
Q Consensus 90 ~~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg~~ldvF~V~ 139 (166)
+.+.|++.-+|.||++++|+.+|+++|+||..-.- .+.+.+..-+..++
T Consensus 342 ~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~-~~~~~~~y~~~d~~ 390 (416)
T 3k5p_A 342 TGTRFMHVHENRPGILNSLMNVFSHHHINIASQFL-QTDGEVGYLVMEAD 390 (416)
T ss_dssp SSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEE-EECSSCEEEEEEEC
T ss_pred CceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhc-cCCCceEEEEEEec
Confidence 57899999999999999999999999999996554 44555555555554
No 23
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=90.25 E-value=0.63 Score=35.11 Aligned_cols=52 Identities=15% Similarity=0.140 Sum_probs=38.0
Q ss_pred CCeEEEEEE-ecCCCchHHHHHHHHHHCCCcEEEEEEeecCCCeEEEEEEEcC
Q 037628 89 VPIHEVVFS-TVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDG 140 (166)
Q Consensus 89 ~~~~eI~I~-~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg~~ldvF~V~~ 140 (166)
.+...|+|. .+|+||.+++|.+.|+.+|+||.---+-.+.+|..--.|.|..
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~ 75 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPR 75 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECG
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEec
Confidence 456788888 6999999999999999999999876554444563334488764
No 24
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=88.63 E-value=1.4 Score=37.30 Aligned_cols=47 Identities=13% Similarity=0.154 Sum_probs=39.5
Q ss_pred CCeEEEEEEecC-CCchHHHHHHHHHHCCCcEEEEEEeecCCCeEEEE
Q 037628 89 VPIHEVVFSTVD-KPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDV 135 (166)
Q Consensus 89 ~~~~eI~I~~~D-rpGLfa~It~~La~~glNI~~A~i~tt~dg~~ldv 135 (166)
...+.+++..++ ++|+++.|+.+|+++|+||.+....+....+.+..
T Consensus 99 ~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~ 146 (415)
T 3p96_A 99 PSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLEL 146 (415)
T ss_dssp CCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEE
T ss_pred CCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEE
Confidence 456889999999 99999999999999999999998887545555544
No 25
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=83.97 E-value=1.1 Score=39.50 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=31.2
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEee
Q 037628 90 PIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFS 126 (166)
Q Consensus 90 ~~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~t 126 (166)
..+=|-+.+.|+||.+++|+++|+++|++|.+..+..
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~ 394 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKE 394 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecc
Confidence 3456778899999999999999999999999887753
No 26
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=83.02 E-value=1.3 Score=33.71 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=30.2
Q ss_pred CCeEEEEE-EecCCCchHHHHHHHHHHCCCcEEEEEE
Q 037628 89 VPIHEVVF-STVDKPKLLSQLSALLSDIGLNIREAHV 124 (166)
Q Consensus 89 ~~~~eI~I-~~~DrpGLfa~It~~La~~glNI~~A~i 124 (166)
.+...|+| ..+|+||.+++|...|+++|+||----+
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~ 49 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQ 49 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEc
Confidence 35677777 4699999999999999999999986544
No 27
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=80.42 E-value=1.5 Score=34.67 Aligned_cols=55 Identities=16% Similarity=0.081 Sum_probs=38.3
Q ss_pred CCCCeEEEEEE-ecCCCchHHHHHHHHHHCCCcEEEEEEeec--CCCeEEEEEEEcCC
Q 037628 87 ELVPIHEVVFS-TVDKPKLLSQLSALLSDIGLNIREAHVFST--TDGYSLDVFVVDGW 141 (166)
Q Consensus 87 ~~~~~~eI~I~-~~DrpGLfa~It~~La~~glNI~~A~i~tt--~dg~~ldvF~V~~~ 141 (166)
...+...|+|. .+|+||..++|-+.|++.|+||----+-.. .++..--+|.+...
T Consensus 31 ~~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~ 88 (200)
T 4go7_X 31 HDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD 88 (200)
T ss_dssp EECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG
T ss_pred ccCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh
Confidence 34456777775 699999999999999999999975433222 13344445888653
No 28
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=80.23 E-value=1.6 Score=32.81 Aligned_cols=52 Identities=12% Similarity=0.120 Sum_probs=36.1
Q ss_pred CCeEEEEEEe-cCCCchHHHHHHHHHHCCCcEEEEEEeecC--CCeEEEEEEEcC
Q 037628 89 VPIHEVVFST-VDKPKLLSQLSALLSDIGLNIREAHVFSTT--DGYSLDVFVVDG 140 (166)
Q Consensus 89 ~~~~eI~I~~-~DrpGLfa~It~~La~~glNI~~A~i~tt~--dg~~ldvF~V~~ 140 (166)
.+...|++.. +|+||..+++.+.|++.|+||.--.+-... .|..--.|.|..
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~ 68 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKK 68 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEG
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEeh
Confidence 3456676654 899999999999999999999864442221 332223388754
No 29
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=79.90 E-value=4.2 Score=33.82 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=35.1
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCC
Q 037628 90 PIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130 (166)
Q Consensus 90 ~~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg 130 (166)
.-+.|.+..+|+||-|.++-+.|+.+|+|...-...-...+
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~ 239 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKK 239 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSS
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCC
Confidence 45788888899999999999999999999997777665554
No 30
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=79.86 E-value=5.9 Score=33.42 Aligned_cols=41 Identities=20% Similarity=0.207 Sum_probs=34.2
Q ss_pred CeEEEEEEec-CCCchHHHHHHHHHHCCCcEEEEEEeecCCC
Q 037628 90 PIHEVVFSTV-DKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130 (166)
Q Consensus 90 ~~~eI~I~~~-DrpGLfa~It~~La~~glNI~~A~i~tt~dg 130 (166)
.-+.|.+..+ |+||-|.++-+.|+.+|+|...-...-+..+
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~ 241 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQY 241 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSS
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCC
Confidence 4678888886 9999999999999999999987666655544
No 31
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=79.43 E-value=2.2 Score=31.96 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=29.6
Q ss_pred CCeEEEEEEecC---CCchHHHHHHHHHHCCCcEEE
Q 037628 89 VPIHEVVFSTVD---KPKLLSQLSALLSDIGLNIRE 121 (166)
Q Consensus 89 ~~~~eI~I~~~D---rpGLfa~It~~La~~glNI~~ 121 (166)
.+...|.+...+ +||+.+++..+|++.|+||..
T Consensus 101 ~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ 136 (167)
T 2re1_A 101 DTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM 136 (167)
T ss_dssp SSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE
T ss_pred CCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE
Confidence 357788898877 999999999999999999986
No 32
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=78.38 E-value=5.4 Score=32.92 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=34.5
Q ss_pred CeEEEEEEe---cCCCchHHHHHHHHHHCCCcEEEEEEeecCCC
Q 037628 90 PIHEVVFST---VDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130 (166)
Q Consensus 90 ~~~eI~I~~---~DrpGLfa~It~~La~~glNI~~A~i~tt~dg 130 (166)
.-+.|.+.. +|+||-|.++-+.|+.+|+|...-...-...+
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~ 228 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQ 228 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSS
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCC
Confidence 456777788 89999999999999999999997777665554
No 33
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=76.22 E-value=2.8 Score=31.34 Aligned_cols=32 Identities=22% Similarity=0.342 Sum_probs=27.5
Q ss_pred CCeEEEEEEecC---CCchHHHHHHHHHHCCCcEE
Q 037628 89 VPIHEVVFSTVD---KPKLLSQLSALLSDIGLNIR 120 (166)
Q Consensus 89 ~~~~eI~I~~~D---rpGLfa~It~~La~~glNI~ 120 (166)
.+...|.+++.+ +||+.+++..+|++.|+||.
T Consensus 93 ~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~ 127 (167)
T 2dt9_A 93 PDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIE 127 (167)
T ss_dssp CSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCC
T ss_pred CCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEE
Confidence 345668888876 99999999999999999994
No 34
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=75.36 E-value=2.2 Score=32.41 Aligned_cols=33 Identities=18% Similarity=0.322 Sum_probs=28.3
Q ss_pred CCeEEEEEEec---CCCchHHHHHHHHHHCCCcEEE
Q 037628 89 VPIHEVVFSTV---DKPKLLSQLSALLSDIGLNIRE 121 (166)
Q Consensus 89 ~~~~eI~I~~~---DrpGLfa~It~~La~~glNI~~ 121 (166)
.+...|.++.. ++||+.+++..+|++.|+||.-
T Consensus 93 ~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~ 128 (178)
T 2dtj_A 93 DQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL 128 (178)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE
T ss_pred CCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE
Confidence 45667777776 8899999999999999999986
No 35
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=72.89 E-value=11 Score=28.70 Aligned_cols=53 Identities=17% Similarity=0.117 Sum_probs=37.2
Q ss_pred CeEEEEE-EecCCCchHHHHHHHHHHCCCcEEEEEEeecC--CCeEEEEEEEcCCC
Q 037628 90 PIHEVVF-STVDKPKLLSQLSALLSDIGLNIREAHVFSTT--DGYSLDVFVVDGWP 142 (166)
Q Consensus 90 ~~~eI~I-~~~DrpGLfa~It~~La~~glNI~~A~i~tt~--dg~~ldvF~V~~~~ 142 (166)
+...|+| ..+|+||..++|.+.|+.+|+||.---+.... +|..--+|.+...+
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~ 70 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV 70 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTT
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhH
Confidence 3444544 46899999999999999999999754443233 45444458887654
No 36
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=68.48 E-value=24 Score=29.84 Aligned_cols=50 Identities=20% Similarity=0.229 Sum_probs=35.9
Q ss_pred CeEEEEEEec--CCCchHHHHHHHHHHCCCcEEEEEEeecCCCeEEEEEEEc
Q 037628 90 PIHEVVFSTV--DKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVD 139 (166)
Q Consensus 90 ~~~eI~I~~~--DrpGLfa~It~~La~~glNI~~A~i~tt~dg~~ldvF~V~ 139 (166)
+.+.+++.++ |+||-|.++-+.|+.+|+|...-...-+..+..-=.|.|+
T Consensus 205 ~kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD 256 (329)
T 3luy_A 205 EYESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVT 256 (329)
T ss_dssp CEEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEE
T ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEE
Confidence 3455666666 7899999999999999999987777666655322234443
No 37
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=67.07 E-value=20 Score=30.73 Aligned_cols=53 Identities=21% Similarity=0.127 Sum_probs=38.7
Q ss_pred CCeEEEEEE-ecCCCchHHHHHHHHHHCCCcEEEEEEeecC--CCeEEEEEEEcCC
Q 037628 89 VPIHEVVFS-TVDKPKLLSQLSALLSDIGLNIREAHVFSTT--DGYSLDVFVVDGW 141 (166)
Q Consensus 89 ~~~~eI~I~-~~DrpGLfa~It~~La~~glNI~~A~i~tt~--dg~~ldvF~V~~~ 141 (166)
.+...|+|. .+|+||.+++|.+.|+++|+||----+-+.. +|..--.|.|...
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~ 317 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS 317 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech
Confidence 356678887 7999999999999999999999865552222 4533344777643
No 38
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=59.79 E-value=16 Score=32.36 Aligned_cols=42 Identities=12% Similarity=0.155 Sum_probs=34.6
Q ss_pred CCeEEEEEEecCCCchHHHHHHHHHHCCCcEEEEEEeecCCC
Q 037628 89 VPIHEVVFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDG 130 (166)
Q Consensus 89 ~~~~eI~I~~~DrpGLfa~It~~La~~glNI~~A~i~tt~dg 130 (166)
..-+.|.+..+|+||-|+++-+.|+.+|+|+..-...-...+
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~ 73 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLN 73 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSC
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCC
Confidence 456888889999999999999999999999986555544443
No 39
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=54.45 E-value=10 Score=28.98 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=29.1
Q ss_pred CCeEEEEEEec---CCCchHHHHHHHHHHCCCcEEEEE
Q 037628 89 VPIHEVVFSTV---DKPKLLSQLSALLSDIGLNIREAH 123 (166)
Q Consensus 89 ~~~~eI~I~~~---DrpGLfa~It~~La~~glNI~~A~ 123 (166)
.+...|.++.. +.||+.+++..+|++.|+||.-..
T Consensus 94 ~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 94 DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred CCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 35667777755 899999999999999999998644
No 40
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=43.62 E-value=8.8 Score=30.21 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=26.3
Q ss_pred CeEEEEE---EecCCCchHHHHHHHHHHCCCcEEEE
Q 037628 90 PIHEVVF---STVDKPKLLSQLSALLSDIGLNIREA 122 (166)
Q Consensus 90 ~~~eI~I---~~~DrpGLfa~It~~La~~glNI~~A 122 (166)
+...|.+ -.+..||+.+++..+|++.|+||.--
T Consensus 114 ~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mI 149 (200)
T 4go7_X 114 HIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELI 149 (200)
T ss_dssp CEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred CeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEE
Confidence 3444444 46788999999999999999999853
No 41
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=42.40 E-value=12 Score=27.47 Aligned_cols=32 Identities=6% Similarity=0.002 Sum_probs=26.6
Q ss_pred CeEEEEEEe---cCCCchHHHHHHHHHHCCCcEEE
Q 037628 90 PIHEVVFST---VDKPKLLSQLSALLSDIGLNIRE 121 (166)
Q Consensus 90 ~~~eI~I~~---~DrpGLfa~It~~La~~glNI~~ 121 (166)
+...|+|.. ++.||..+++.+.|+++|+||.-
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~ 51 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDM 51 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSC
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEE
Confidence 456777764 57889999999999999999964
No 42
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=39.07 E-value=15 Score=27.13 Aligned_cols=30 Identities=20% Similarity=0.202 Sum_probs=24.0
Q ss_pred EEEEEEec---CCCchHHHHHHHHHHCCCcEEE
Q 037628 92 HEVVFSTV---DKPKLLSQLSALLSDIGLNIRE 121 (166)
Q Consensus 92 ~eI~I~~~---DrpGLfa~It~~La~~glNI~~ 121 (166)
--|+|..+ |..|+++++++.|++.|+.|--
T Consensus 63 r~i~v~~~l~~~~vGilA~is~pLA~agIsif~ 95 (134)
T 1zhv_A 63 SCFKFQGPFAFDETGIVLSVISPLSTNGIGIFV 95 (134)
T ss_dssp EEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhCCCCeEE
Confidence 34555554 7779999999999999988764
No 43
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=36.79 E-value=32 Score=29.42 Aligned_cols=31 Identities=19% Similarity=0.403 Sum_probs=26.4
Q ss_pred CeEEEEEEec---CCCchHHHHHHHHHHCCCcEE
Q 037628 90 PIHEVVFSTV---DKPKLLSQLSALLSDIGLNIR 120 (166)
Q Consensus 90 ~~~eI~I~~~---DrpGLfa~It~~La~~glNI~ 120 (166)
+...|.++.. +.||+.+++..+|++.|+||.
T Consensus 343 ~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~ 376 (421)
T 3ab4_A 343 QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIE 376 (421)
T ss_dssp CEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCC
T ss_pred CeEEEEEEccCcccCccHHHHHHHHHHHCCCCEE
Confidence 4455777764 799999999999999999998
No 44
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=36.60 E-value=21 Score=26.41 Aligned_cols=32 Identities=9% Similarity=0.233 Sum_probs=24.7
Q ss_pred CeEEEEEEe---cCCCchHHHHHHHHHHCCCcEEE
Q 037628 90 PIHEVVFST---VDKPKLLSQLSALLSDIGLNIRE 121 (166)
Q Consensus 90 ~~~eI~I~~---~DrpGLfa~It~~La~~glNI~~ 121 (166)
+.--|++.. -|-.|+++++++.|++.|+.|--
T Consensus 70 ~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~ 104 (133)
T 1zvp_A 70 LFSLITLTVHSSLEAVGLTAAFATKLAEHGISANV 104 (133)
T ss_dssp CEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEE
T ss_pred CeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEE
Confidence 444555544 68899999999999999998874
No 45
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=35.82 E-value=54 Score=28.56 Aligned_cols=35 Identities=9% Similarity=0.010 Sum_probs=29.8
Q ss_pred CeEEEEEEe---cCCCchHHHHHHHHHHCCCcEEEEEE
Q 037628 90 PIHEVVFST---VDKPKLLSQLSALLSDIGLNIREAHV 124 (166)
Q Consensus 90 ~~~eI~I~~---~DrpGLfa~It~~La~~glNI~~A~i 124 (166)
+...|+|.. +++||+.+++..+|+.+|+||.--.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ 354 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQ 354 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEe
Confidence 566788875 67889999999999999999987665
No 46
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=31.19 E-value=42 Score=30.39 Aligned_cols=53 Identities=17% Similarity=0.261 Sum_probs=36.1
Q ss_pred CCCeEEEEE-EecCCCchHHHHHHHHHHCCCcEEEEEEeecC---CCe-EEEE-EEEcC
Q 037628 88 LVPIHEVVF-STVDKPKLLSQLSALLSDIGLNIREAHVFSTT---DGY-SLDV-FVVDG 140 (166)
Q Consensus 88 ~~~~~eI~I-~~~DrpGLfa~It~~La~~glNI~~A~i~tt~---dg~-~ldv-F~V~~ 140 (166)
..+...|+| -.+|+||+.++|-+.|+++|+||-=--+.... +|. .-++ |.+..
T Consensus 441 ~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~ 499 (600)
T 3l76_A 441 DQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE 499 (600)
T ss_dssp ECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH
T ss_pred eCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH
Confidence 345667766 45999999999999999999999533332222 352 2344 87754
No 47
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=22.88 E-value=1e+02 Score=26.78 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=28.8
Q ss_pred CeEEEEEEec---CCCchHHHHHHHHHHCCCcEEEEEE
Q 037628 90 PIHEVVFSTV---DKPKLLSQLSALLSDIGLNIREAHV 124 (166)
Q Consensus 90 ~~~eI~I~~~---DrpGLfa~It~~La~~glNI~~A~i 124 (166)
+...|.++.. ..||+.+++..+|++.|+||.-..+
T Consensus 373 ~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsq 410 (446)
T 3tvi_A 373 NMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQ 410 (446)
T ss_dssp EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEe
Confidence 4567777754 6899999999999999999986554
No 48
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=22.04 E-value=61 Score=28.22 Aligned_cols=30 Identities=13% Similarity=0.221 Sum_probs=24.7
Q ss_pred eEEEEEEe---cCCCchHHHHHHHHHHCCCcEE
Q 037628 91 IHEVVFST---VDKPKLLSQLSALLSDIGLNIR 120 (166)
Q Consensus 91 ~~eI~I~~---~DrpGLfa~It~~La~~glNI~ 120 (166)
...|.++. ++.||+.+++..+|++.|+||.
T Consensus 404 ~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~ 436 (473)
T 3c1m_A 404 VCVISVVGAGMRGAKGIAGKIFTAVSESGANIK 436 (473)
T ss_dssp EEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCC
T ss_pred cEEEEEEecCCCCChhHHHHHHHHHHHCCCCEE
Confidence 33466666 4589999999999999999994
No 49
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=21.67 E-value=69 Score=27.93 Aligned_cols=32 Identities=6% Similarity=0.179 Sum_probs=26.8
Q ss_pred CeEEEEEEe---cCCCchHHHHHHHHHHCCCcEEE
Q 037628 90 PIHEVVFST---VDKPKLLSQLSALLSDIGLNIRE 121 (166)
Q Consensus 90 ~~~eI~I~~---~DrpGLfa~It~~La~~glNI~~ 121 (166)
+...|+|.. ++.||..++|.+.|+.+|+||--
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~ 331 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEH 331 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEE
Confidence 345677774 68999999999999999999974
No 50
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=20.39 E-value=91 Score=27.68 Aligned_cols=33 Identities=6% Similarity=0.339 Sum_probs=28.1
Q ss_pred CeEEEEEEe---cCCCchHHHHHHHHHHCCCcEEEE
Q 037628 90 PIHEVVFST---VDKPKLLSQLSALLSDIGLNIREA 122 (166)
Q Consensus 90 ~~~eI~I~~---~DrpGLfa~It~~La~~glNI~~A 122 (166)
+.+.|+|.. ++++|..++|-+.|+.+|+||---
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I 375 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV 375 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE
Confidence 456777774 789999999999999999999865
No 51
>2wvf_A Hpnikr, putative nickel-responsive regulator; transcription factor, transcription regulation, RHH, DNA-binding, transcription, metal-binding; 1.60A {Helicobacter pylori} PDB: 2wvc_A 3pht_A 2ca9_A 2cad_A* 2caj_A 3lgh_A 2wvd_A 2wve_A* 2wvb_A 2y3y_A* 3qsi_B
Probab=20.23 E-value=2.6e+02 Score=20.46 Aligned_cols=50 Identities=14% Similarity=0.204 Sum_probs=37.4
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEE-EEeecCCCeEEEEEEEcCC
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREA-HVFSTTDGYSLDVFVVDGW 141 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A-~i~tt~dg~~ldvF~V~~~ 141 (166)
++...|+-...+++-.+++.+..++.=.|... +++- .++.++.++.|.++
T Consensus 66 Gvi~ivydh~~~~l~~~l~~iqh~~~d~Iis~~Hvhl-d~~~clEvivv~G~ 116 (148)
T 2wvf_A 66 AVLVVIYDGGQRELNQRMIDIQHASGTHVLCTTHIHM-DEHNCLETIILQGN 116 (148)
T ss_dssp EEEEEEEETTSTTHHHHHHHHHHHCSSEEEEEEEEEC-SSSEEEEEEEEEEC
T ss_pred EEEEEEEcCCchhHHHHHHHHHHhccCeEEEEeeEEc-CCCCEEEEEEEEcC
Confidence 45556666666899999999999988777643 4433 34799999999875
No 52
>1q5y_A NIKR, nickel responsive regulator; nickel binding, regulatory domain, beta sandwich, metal binding protein; 1.40A {Escherichia coli} SCOP: d.58.18.4 PDB: 3bkt_A 3bkf_A 3bku_A
Probab=20.13 E-value=2e+02 Score=19.00 Aligned_cols=50 Identities=16% Similarity=0.050 Sum_probs=36.7
Q ss_pred eEEEEEEecCCCchHHHHHHHHHHCCCcEEEE-EEeecCCCeEEEEEEEcCC
Q 037628 91 IHEVVFSTVDKPKLLSQLSALLSDIGLNIREA-HVFSTTDGYSLDVFVVDGW 141 (166)
Q Consensus 91 ~~eI~I~~~DrpGLfa~It~~La~~glNI~~A-~i~tt~dg~~ldvF~V~~~ 141 (166)
++...++-....++-.+++....++.=.|... +++- .++.++.++.+.++
T Consensus 6 Gvi~ivydh~~~~l~~~l~~iqh~~~d~I~s~~Hvhl-d~~~clEvivv~G~ 56 (85)
T 1q5y_A 6 AVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHI-NHDDCLEIAVLKGD 56 (85)
T ss_dssp EEEEEEEETTCHHHHHHHHHHHHHTGGGEEEEEEEEC-SSSEEEEEEEEEEE
T ss_pred EEEEEEEeCCchhHHHHHHHHHHhccCeEEEEEeeee-CCCcEEEEEEEEcC
Confidence 34555666666899999999999988777743 4433 34489999999875
Done!