AmiGO: BLAST Results


BLAST match view associations BLAST with AT5G20220 AT5G20220 AT5G20220	protein from Arabidopsis thaliana	2.6e-118
BLAST match view associations BLAST with CNBP CNBP CNBP cDNA FLJ61146, highly similar to Cellular nucleic acid-binding protein	protein from Homo sapiens	1.2e-10
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Bos taurus	8.2e-10
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	4.0e-09
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	8.8e-09
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Homo sapiens	4.7e-08
BLAST match view associations BLAST with Q4R501 Q4R501 Q4R501 Brain cDNA, clone: QnpA-14556, similar to human zinc finger protein 9 (a cellular retroviral nucleicacid binding protein) (ZNF9),	protein from Macaca fascicularis	4.7e-08
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Pongo abelii	4.7e-08
BLAST match view associations BLAST with Cnbp Cnbp Cnbp CCHC-type zinc finger, nucleic acid binding protein	gene from Rattus norvegicus	4.7e-08
BLAST match view associations BLAST with Cnbp Cnbp Cnbp Cellular nucleic acid-binding protein	protein from Rattus norvegicus	4.7e-08
BLAST match view associations BLAST with Cnbp Cnbp Cnbp cellular nucleic acid binding protein	protein from Mus musculus	5.9e-08
BLAST match view associations BLAST with CNBP CNBP CNBP Uncharacterized protein	protein from Canis lupus familiaris	7.2e-08
BLAST match view associations BLAST with cnbpa cnbpa cnbpa CCHC-type zinc finger, nucleic acid binding protein a	gene_product from Danio rerio	5.4e-07
BLAST match view associations BLAST with ZCCHC9 ZCCHC9 ZCCHC9 Uncharacterized protein	protein from Gallus gallus	2.5e-06
BLAST match view associations BLAST with cpsf-4 cpsf-4 cpsf-4	gene from Caenorhabditis elegans	2.5e-06
BLAST match view associations BLAST with K08D12.3 K08D12.3 K08D12.3	gene from Caenorhabditis elegans	3.1e-06
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Uncharacterized protein	protein from Bos taurus	6.9e-06
BLAST match view associations BLAST with zcchc7 zcchc7 zcchc7 zinc finger, CCHC domain containing 7	gene_product from Danio rerio	1.2e-05
BLAST match view associations BLAST with AIR2 AIR2 AIR2 RNA-binding subunit of the TRAMP nuclear RNA surveillance complex	gene from Saccharomyces cerevisiae	1.2e-05
BLAST match view associations BLAST with DDB_G0293328 DDB_G0293328 DDB_G0293328 Cellular nucleic acid-binding protein	gene from Dictyostelium discoideum	1.4e-05
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Uncharacterized protein	protein from Canis lupus familiaris	1.8e-05
BLAST match view associations BLAST with CG3800 CG3800 CG3800	protein from Drosophila melanogaster	2.8e-05
BLAST match view associations BLAST with cnbpb cnbpb cnbpb CCHC-type zinc finger, nucleic acid binding protein b	gene_product from Danio rerio	5.4e-05
BLAST match view associations BLAST with AT3G42860 AT3G42860 AT3G42860	protein from Arabidopsis thaliana	6.6e-05
BLAST match view associations BLAST with AT3G43590 AT3G43590 AT3G43590	protein from Arabidopsis thaliana	7.5e-05
BLAST match view associations BLAST with zcchc9 zcchc9 zcchc9 zinc finger, CCHC domain containing 9	gene_product from Danio rerio	8.3e-05
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	0.00010
BLAST match view associations BLAST with GIS2 GIS2 GIS2	gene_product from Candida albicans	0.00015
BLAST match view associations BLAST with GIS2 GIS2 GIS2 Putative uncharacterized protein GIS2	protein from Candida albicans SC5314	0.00015
BLAST match view associations BLAST with ZCCHC9 ZCCHC9 ZCCHC9 Uncharacterized protein	protein from Sus scrofa	0.00035
BLAST match view associations BLAST with ZCCHC9 ZCCHC9 ZCCHC9 Uncharacterized protein	protein from Canis lupus familiaris	0.00036
BLAST match view associations BLAST with Zcchc7 Zcchc7 Zcchc7 zinc finger, CCHC domain containing 7	protein from Mus musculus	0.00043
BLAST match view associations BLAST with AT5G52380 AT5G52380 AT5G52380	protein from Arabidopsis thaliana	0.00058
BLAST match view associations BLAST with GIS2 GIS2 GIS2 Translational activator for mRNAs with internal ribosome entry sites	gene from Saccharomyces cerevisiae	0.00058
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Zinc finger CCHC domain-containing protein 7	protein from Homo sapiens	0.00072
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Zinc finger CCHC domain-containing protein 13	protein from Homo sapiens	0.00074
BLAST match view associations BLAST with Zcchc9 Zcchc9 Zcchc9 zinc finger, CCHC domain containing 9	gene from Rattus norvegicus	0.00078

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037631
        (388 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2149234 - symbol:AT5G20220 species:3702 "Arabi...  1165  2.6e-118  1
ASPGD|ASPL0000028407 - symbol:AN5111 species:162425 "Emer...   130  5.5e-11   2
UNIPROTKB|B4DP17 - symbol:CNBP "cDNA FLJ61146, highly sim...   124  1.2e-10   2
UNIPROTKB|Q3T0Q6 - symbol:CNBP "Cellular nucleic acid-bin...   124  8.2e-10   2
UNIPROTKB|F1N8C2 - symbol:CNBP "Cellular nucleic acid-bin...   124  4.0e-09   2
UNIPROTKB|O42395 - symbol:CNBP "Cellular nucleic acid-bin...   124  8.8e-09   2
UNIPROTKB|P62633 - symbol:CNBP "Cellular nucleic acid-bin...   124  4.7e-08   2
UNIPROTKB|Q4R501 - symbol:Q4R501 "Brain cDNA, clone: QnpA...   124  4.7e-08   2
UNIPROTKB|Q5R5R5 - symbol:CNBP "Cellular nucleic acid-bin...   124  4.7e-08   2
RGD|621807 - symbol:Cnbp "CCHC-type zinc finger, nucleic ...   124  4.7e-08   2
UNIPROTKB|P62634 - symbol:Cnbp "Cellular nucleic acid-bin...   124  4.7e-08   2
MGI|MGI:88431 - symbol:Cnbp "cellular nucleic acid bindin...   124  5.9e-08   2
UNIPROTKB|E2RPD7 - symbol:CNBP "Uncharacterized protein" ...   124  7.2e-08   2
UNIPROTKB|F8WFK2 - symbol:Cnbp "Cellular nucleic acid-bin...   124  7.2e-08   2
ZFIN|ZDB-GENE-030131-5045 - symbol:cnbpa "CCHC-type zinc ...   122  5.4e-07   1
UNIPROTKB|E1BZR6 - symbol:ZCCHC9 "Uncharacterized protein...   132  2.5e-06   1
WB|WBGene00044329 - symbol:cpsf-4 species:6239 "Caenorhab...   135  2.5e-06   1
WB|WBGene00019537 - symbol:K08D12.3 species:6239 "Caenorh...   115  3.1e-06   1
UNIPROTKB|G3MZ41 - symbol:ZCCHC13 "Uncharacterized protei...   121  6.9e-06   1
ZFIN|ZDB-GENE-030102-2 - symbol:zcchc7 "zinc finger, CCHC...   134  1.2e-05   1
SGD|S000002334 - symbol:AIR2 "RNA-binding subunit of the ...   130  1.2e-05   1
DICTYBASE|DDB_G0293328 - symbol:DDB_G0293328 "Cellular nu...   109  1.4e-05   1
UNIPROTKB|J9NRQ2 - symbol:ZCCHC13 "Uncharacterized protei...   108  1.8e-05   1
FB|FBgn0034802 - symbol:CG3800 species:7227 "Drosophila m...   115  2.8e-05   1
ZFIN|ZDB-GENE-030131-7782 - symbol:cnbpb "CCHC-type zinc ...   121  5.4e-05   1
TAIR|locus:2078526 - symbol:AT3G42860 species:3702 "Arabi...   124  6.6e-05   1
TAIR|locus:2079859 - symbol:AT3G43590 species:3702 "Arabi...   126  7.5e-05   1
ZFIN|ZDB-GENE-031030-9 - symbol:zcchc9 "zinc finger, CCHC...   120  8.3e-05   1
UNIPROTKB|F1NI84 - symbol:CNBP "Cellular nucleic acid-bin...   101  0.00010   1
ASPGD|ASPL0000040986 - symbol:AN9093 species:162425 "Emer...   117  0.00014   1
CGD|CAL0002417 - symbol:GIS2 species:5476 "Candida albica...   112  0.00015   1
UNIPROTKB|Q59YJ9 - symbol:GIS2 "Putative uncharacterized ...   112  0.00015   1
UNIPROTKB|F1RF07 - symbol:ZCCHC9 "Uncharacterized protein...   115  0.00035   1
UNIPROTKB|F6V033 - symbol:ZCCHC9 "Uncharacterized protein...   115  0.00036   1
MGI|MGI:2442912 - symbol:Zcchc7 "zinc finger, CCHC domain...   119  0.00043   1
TAIR|locus:2156647 - symbol:AT5G52380 species:3702 "Arabi...   113  0.00058   1
SGD|S000005199 - symbol:GIS2 "Translational activator for...   104  0.00058   1
POMBASE|SPAC683.02c - symbol:SPAC683.02c "zf-CCHC type zi...   104  0.00067   2
UNIPROTKB|Q8N3Z6 - symbol:ZCCHC7 "Zinc finger CCHC domain...   117  0.00072   1
UNIPROTKB|Q8WW36 - symbol:ZCCHC13 "Zinc finger CCHC domai...   100  0.00074   2
RGD|1307450 - symbol:Zcchc9 "zinc finger, CCHC domain con...   112  0.00078   1


>TAIR|locus:2149234 [details] [associations]
            symbol:AT5G20220 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0031072 "heat shock protein binding"
            evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
            InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002688
            GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            IPI:IPI00540792 RefSeq:NP_001078608.1 RefSeq:NP_568393.1
            UniGene:At.31217 ProteinModelPortal:F4K466 SMR:F4K466
            EnsemblPlants:AT5G20220.1 EnsemblPlants:AT5G20220.2 GeneID:832144
            KEGG:ath:AT5G20220 OMA:SIDERPW Uniprot:F4K466
        Length = 393

 Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
 Identities = 220/379 (58%), Positives = 268/379 (70%)

Query:    14 RRVSFSPCSMSSTNDD-SVAVPKQN--QLGYDPSEELLGLGVDLKPRNAAPSTPKPRSWF 70
             R +S S  S S  N+D SV+  +QN  Q+GYDPSEEL G  VD KPR  +  + +PRSWF
Sbjct:    23 RAISSSSSSSSDNNNDGSVSSSRQNNRQMGYDPSEELFG--VDFKPRFISGDSREPRSWF 80

Query:    71 GPNGQYIRELPCPSCRGRGYTPCVECGIERTRSDCSLCNGKGIMTCRQCSGDCVIWEESV 130
             GPNGQYIRELPCP+CRGRGYT C  CGIER+R DC  C GKGIMTC +C GDCVIWEES+
Sbjct:    81 GPNGQYIRELPCPTCRGRGYTSCSNCGIERSRLDCPQCKGKGIMTCLRCLGDCVIWEESI 140

Query:   131 DEQPWENAHSVSPLKVKEDDEVDNLEIKVGVKKKSKRVYHSPPPEVGLKISRSLKSLNAK 190
             DE+PWE A S SP +VKEDDEVDNLEIK   ++KSKR+Y SP PEVG KISRSLKSLNAK
Sbjct:   141 DERPWEKARSSSPFRVKEDDEVDNLEIKFSKRRKSKRIYQSPTPEVGQKISRSLKSLNAK 200

Query:   191 TGLFTKRMKIIHRDPKLHAQRVXXXXXXXXXXXXXXXXSETLKAFFSDPENRQKRSIAMK 250
             TGLF+KRMKIIHRDP LHAQRV                SE++KAFFS+P NR++RS++MK
Sbjct:   201 TGLFSKRMKIIHRDPVLHAQRVAAIKKAKGTPAARKHASESMKAFFSNPVNREQRSLSMK 260

Query:   251 GVRFYCKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSK 310
             G +FYCK+CG+EGHR+ YCPEL     DR F+CR CG +GHNRRTCPKS+     G  ++
Sbjct:   261 GTKFYCKNCGQEGHRRHYCPELGTN-ADRKFRCRGCGGKGHNRRTCPKSKSIVTKGISTR 319

Query:   311 HHRCQICRQRGHNRRTCPQVTGEKRH---DNNGQKHIPTSASKTCTCRFCGEKGHNIRTC 367
             +H+C IC +RGHN RTC + TG       +N+G+  +      T  C FC + GHN+RTC
Sbjct:   320 YHKCGICGERGHNSRTCRKPTGVNPSCSGENSGEDGV---GKITYACGFCKKMGHNVRTC 376

Query:   368 PRRNLEQLKSEEASQQASS 386
             P + +    S+   +Q  S
Sbjct:   377 PSKQVSD--SDSCLEQEGS 393


>ASPGD|ASPL0000028407 [details] [associations]
            symbol:AN5111 species:162425 "Emericella nidulans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0000747 "conjugation with
            cellular fusion" evidence=IEA] [GO:0031137 "regulation of
            conjugation with cellular fusion" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 EMBL:BN001305 Gene3D:4.10.60.10
            SUPFAM:SSF57756 OMA:FQFMSSS EnsemblFungi:CADANIAT00003095
            Uniprot:C8VEX3
        Length = 171

 Score = 130 (50.8 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
 Identities = 37/123 (30%), Positives = 48/123 (39%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDR---GFKCRLCGERGHNRRTCPKSRL---SYHNGTVS 309
             C  CG  GH    CP+   G  +R   G +C  CG  GH  R C +       +  G   
Sbjct:    51 CYRCGAVGHISRECPQA--GENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGG 108

Query:   310 KHHRCQICRQRGHNRRTCPQVTGEKRHDNNGQKHI----PTSASKTCTCRFCGEKGHNIR 365
             +   C  C   GH  R C Q  G+K ++     H+    PT A     C  C + GH   
Sbjct:   109 RQQTCYSCGGFGHMARDCTQ--GQKCYNCGETGHVSRDCPTEAKGERVCYQCKQPGHIQS 166

Query:   366 TCP 368
              CP
Sbjct:   167 ACP 169

 Score = 110 (43.8 bits), Expect = 0.00023, P = 0.00023
 Identities = 38/139 (27%), Positives = 52/139 (37%)

Query:   243 QKRSIAMKGVRFYCKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLS 302
             Q R    KG    C +CG +GH    C      +  +   C  CG  GH  R CP++   
Sbjct:    17 QARDCPKKGTPT-CYNCGGQGHVSRECT-----VAPKEKSCYRCGAVGHISRECPQAG-- 68

Query:   303 YHNGTVSKHHRCQICRQRGHNRRTCPQ-----------VTGEKR--HDNNGQKHIPTSAS 349
               N   +    C  C + GH  R C Q             G ++  +   G  H+    +
Sbjct:    69 -ENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCT 127

Query:   350 KTCTCRFCGEKGHNIRTCP 368
             +   C  CGE GH  R CP
Sbjct:   128 QGQKCYNCGETGHVSRDCP 146

 Score = 49 (22.3 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
 Identities = 12/29 (41%), Positives = 12/29 (41%)

Query:    93 CVECGIERTRSDCSLCNGKGIMTCRQCSG 121
             C  CG E T      C  KG  TC  C G
Sbjct:     8 CFNCG-EATHQARD-CPKKGTPTCYNCGG 34


>UNIPROTKB|B4DP17 [details] [associations]
            symbol:CNBP "cDNA FLJ61146, highly similar to Cellular
            nucleic acid-binding protein" species:9606 "Homo sapiens"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 HOVERGEN:HBG000397 EMBL:AC108673 EMBL:AC135587
            UniGene:Hs.518249 HGNC:HGNC:13164 ChiTaRS:CNBP EMBL:AK298154
            IPI:IPI00977873 SMR:B4DP17 STRING:B4DP17 Ensembl:ENST00000500450
            UCSC:uc011bku.2 Uniprot:B4DP17
        Length = 160

 Score = 124 (48.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    57 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 103

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   104 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 154

 Score = 118 (46.6 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 38/131 (29%), Positives = 50/131 (38%)

Query:   256 CKHCGREGHRKFYCPE---LKDGLTDRGFK-CRLCGERGHNRRTCPKSRLSYHN----GT 307
             C  CGR GH    CP       G+  RG   C  CGE GH  + C     + +N    G 
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDACYNCGRGGH 65

Query:   308 VSKHHR---------CQICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCG 358
             ++K  +         C  C + GH  R C     +K +      HI    +K   C  CG
Sbjct:    66 IAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCG 124

Query:   359 EKGHNIRTCPR 369
             E GH    C +
Sbjct:   125 ETGHVAINCSK 135

 Score = 52 (23.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
 Identities = 15/43 (34%), Positives = 17/43 (39%)

Query:    71 GPNGQYIRELPCPSCRGRGYTP-----CVECGIE-RTRSDCSL 107
             G +G + RE P    RGRG        C  CG       DC L
Sbjct:    10 GRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDL 52


>UNIPROTKB|Q3T0Q6 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9913 "Bos taurus" [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
            GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
            GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
            OMA:FQFMSSS EMBL:BC102298 IPI:IPI00697831 RefSeq:NP_001029396.1
            UniGene:Bt.9541 ProteinModelPortal:Q3T0Q6 STRING:Q3T0Q6
            PRIDE:Q3T0Q6 Ensembl:ENSBTAT00000016130 GeneID:504831
            KEGG:bta:504831 CTD:7555 GeneTree:ENSGT00510000047065
            HOVERGEN:HBG000397 InParanoid:Q3T0Q6 OrthoDB:EOG45HRZN
            NextBio:20866851 Uniprot:Q3T0Q6
        Length = 170

 Score = 124 (48.7 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    67 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 113

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   114 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 164

 Score = 102 (41.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 30/114 (26%), Positives = 40/114 (35%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C   +D        C  CG  GH  + C + +         +   C 
Sbjct:    47 CYRCGESGHLAKDCDLQEDA-------CYNCGRGGHIAKDCKEPKRE-------REQCCY 92

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C     +K +      HI    +K   C  CGE GH    C +
Sbjct:    93 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINCSK 145

 Score = 44 (20.5 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query:    71 GPNGQYIRELPCPSCRGRG 89
             G +G + RE P    RGRG
Sbjct:    10 GRSGHWARECPTGGGRGRG 28


>UNIPROTKB|F1N8C2 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
            GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 OMA:FQFMSSS GeneTree:ENSGT00510000047065
            IPI:IPI00582111 EMBL:AADN02013931 Ensembl:ENSGALT00000036274
            ArrayExpress:F1N8C2 Uniprot:F1N8C2
        Length = 171

 Score = 124 (48.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    68 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 114

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   115 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 165

 Score = 43 (20.2 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
 Identities = 15/53 (28%), Positives = 19/53 (35%)

Query:    71 GPNGQYIRELPCPSCRGRGYTPCVECGIERTRSD----CSLCNGKGIMTCRQC 119
             G  G + RE P    RGRG       G +   S     C  C   G +  + C
Sbjct:    10 GRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLA-KDC 61


>UNIPROTKB|O42395 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0006351
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
            OrthoDB:EOG45HRZN EMBL:AF004942 IPI:IPI00582111 RefSeq:NP_990238.1
            UniGene:Gga.3333 ProteinModelPortal:O42395 STRING:O42395
            GeneID:395731 KEGG:gga:395731 InParanoid:O42395 NextBio:20815799
            ArrayExpress:O42395 Uniprot:O42395
        Length = 172

 Score = 124 (48.7 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    69 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 115

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   116 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 166

 Score = 106 (42.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
 Identities = 31/114 (27%), Positives = 44/114 (38%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C +L++   D+   C  CG  GH  + C + +         +   C 
Sbjct:    48 CYRCGESGHLAKDC-DLQE---DKA--CYNCGRGGHIAKDCKEPKRE-------REQCCY 94

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C     +K +      HI    +K   C  CGE GH    C +
Sbjct:    95 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINCSK 147

 Score = 43 (20.2 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
 Identities = 15/53 (28%), Positives = 19/53 (35%)

Query:    71 GPNGQYIRELPCPSCRGRGYTPCVECGIERTRSD----CSLCNGKGIMTCRQC 119
             G  G + RE P    RGRG       G +   S     C  C   G +  + C
Sbjct:    10 GRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLA-KDC 61


>UNIPROTKB|P62633 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
            evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0006695 "cholesterol biosynthetic process" evidence=TAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
            GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
            EMBL:CH471052 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 GO:GO:0006695 eggNOG:COG5082 Gene3D:4.10.60.10
            SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250 CTD:7555
            HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:M28372 EMBL:U19765
            EMBL:AY329622 EMBL:AK054592 EMBL:DQ092367 EMBL:DQ091187
            EMBL:AK314380 EMBL:BT019613 EMBL:AC108673 EMBL:AC135587
            EMBL:BC000288 EMBL:BC014911 EMBL:BC093058 IPI:IPI00430812
            IPI:IPI00430813 IPI:IPI00430814 IPI:IPI00895911 IPI:IPI00967344
            PIR:A32760 RefSeq:NP_001120665.1 RefSeq:NP_001120666.1
            RefSeq:NP_001120668.1 RefSeq:NP_003409.1 UniGene:Hs.518249
            ProteinModelPortal:P62633 SMR:P62633 IntAct:P62633 STRING:P62633
            PhosphoSite:P62633 DMDM:50401852 PaxDb:P62633 PRIDE:P62633
            DNASU:7555 Ensembl:ENST00000422453 Ensembl:ENST00000446936
            Ensembl:ENST00000451728 Ensembl:ENST00000502976
            Ensembl:ENST00000504813 GeneID:7555 KEGG:hsa:7555 UCSC:uc003elq.4
            UCSC:uc003elr.4 GeneCards:GC03M128886 HGNC:HGNC:13164 MIM:116955
            MIM:602668 neXtProt:NX_P62633 Orphanet:606 PharmGKB:PA37737
            InParanoid:P62633 PhylomeDB:P62633 ChiTaRS:CNBP GenomeRNAi:7555
            NextBio:29559 ArrayExpress:P62633 Bgee:P62633 CleanEx:HS_CNBP
            Genevestigator:P62633 GermOnline:ENSG00000169714 Uniprot:P62633
        Length = 177

 Score = 124 (48.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    74 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 120

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   121 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 171

 Score = 102 (41.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 30/114 (26%), Positives = 40/114 (35%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C   +D        C  CG  GH  + C + +         +   C 
Sbjct:    54 CYRCGESGHLAKDCDLQEDA-------CYNCGRGGHIAKDCKEPKRE-------REQCCY 99

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C     +K +      HI    +K   C  CGE GH    C +
Sbjct:   100 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINCSK 152

 Score = 44 (20.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query:    71 GPNGQYIRELPCPSCRGRG 89
             G +G + RE P    RGRG
Sbjct:    10 GRSGHWARECPTGGGRGRG 28


>UNIPROTKB|Q4R501 [details] [associations]
            symbol:Q4R501 "Brain cDNA, clone: QnpA-14556, similar to
            human zinc finger protein 9 (a cellular retroviral nucleicacid
            binding protein) (ZNF9)," species:9541 "Macaca fascicularis"
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005783 "endoplasmic
            reticulum" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0005783 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
            GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0003676
            Gene3D:4.10.60.10 SUPFAM:SSF57756 HOVERGEN:HBG000397 EMBL:AB169743
            EMBL:AB174174 ProteinModelPortal:Q4R501 SMR:Q4R501 PRIDE:Q4R501
            Uniprot:Q4R501
        Length = 177

 Score = 124 (48.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    74 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 120

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   121 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 171

 Score = 102 (41.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 30/114 (26%), Positives = 40/114 (35%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C   +D        C  CG  GH  + C + +         +   C 
Sbjct:    54 CYRCGESGHLAKDCDLQEDA-------CYNCGRGGHIAKDCKEPKRE-------REQCCY 99

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C     +K +      HI    +K   C  CGE GH    C +
Sbjct:   100 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINCSK 152

 Score = 44 (20.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query:    71 GPNGQYIRELPCPSCRGRG 89
             G +G + RE P    RGRG
Sbjct:    10 GRSGHWARECPTGGGRGRG 28


>UNIPROTKB|Q5R5R5 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005829
            "cytosol" evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008284 GO:GO:0008270
            GO:GO:0045944 GO:GO:0006351 Gene3D:4.10.60.10 SUPFAM:SSF57756
            KO:K09250 CTD:7555 GeneTree:ENSGT00510000047065 HOVERGEN:HBG000397
            OMA:CPNGQGG EMBL:CR860791 RefSeq:NP_001126703.1 UniGene:Pab.18652
            ProteinModelPortal:Q5R5R5 SMR:Q5R5R5 PRIDE:Q5R5R5
            Ensembl:ENSPPYT00000015613 GeneID:100173703 KEGG:pon:100173703
            InParanoid:Q5R5R5 Uniprot:Q5R5R5
        Length = 177

 Score = 124 (48.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    74 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 120

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   121 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 171

 Score = 102 (41.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 30/114 (26%), Positives = 40/114 (35%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C   +D        C  CG  GH  + C + +         +   C 
Sbjct:    54 CYRCGESGHLAKDCDLQEDA-------CYNCGRGGHIAKDCKEPKRE-------REQCCY 99

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C     +K +      HI    +K   C  CGE GH    C +
Sbjct:   100 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINCSK 152

 Score = 44 (20.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query:    71 GPNGQYIRELPCPSCRGRG 89
             G +G + RE P    RGRG
Sbjct:    10 GRSGHWARECPTGGGRGRG 28


>RGD|621807 [details] [associations]
            symbol:Cnbp "CCHC-type zinc finger, nucleic acid binding protein"
            species:10116 "Rattus norvegicus" [GO:0003697 "single-stranded DNA
            binding" evidence=IDA] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005783
            "endoplasmic reticulum" evidence=ISO;ISS] [GO:0005829 "cytosol"
            evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISO;ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;ISS] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 RGD:621807 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
            GO:GO:0008270 GO:GO:0003727 GO:GO:0045944 GO:GO:0006351
            GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
            OrthoDB:EOG45HRZN EMBL:D45254 EMBL:AF242550 EMBL:AY329624
            EMBL:AB158421 EMBL:AB158422 EMBL:BC062225 IPI:IPI00201505
            PIR:JC2512 RefSeq:NP_072120.1 UniGene:Rn.6187
            ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
            PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
            InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
            Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
        Length = 177

 Score = 124 (48.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    74 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 120

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   121 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 171

 Score = 102 (41.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 30/114 (26%), Positives = 40/114 (35%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C   +D        C  CG  GH  + C + +         +   C 
Sbjct:    54 CYRCGESGHLAKDCDLQEDA-------CYNCGRGGHIAKDCKEPKRE-------REQCCY 99

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C     +K +      HI    +K   C  CGE GH    C +
Sbjct:   100 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINCSK 152

 Score = 44 (20.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query:    71 GPNGQYIRELPCPSCRGRG 89
             G +G + RE P    RGRG
Sbjct:    10 GRSGHWARECPTGGGRGRG 28


>UNIPROTKB|P62634 [details] [associations]
            symbol:Cnbp "Cellular nucleic acid-binding protein"
            species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
            evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 RGD:621807 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
            GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
            GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
            CTD:7555 HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:D45254
            EMBL:AF242550 EMBL:AY329624 EMBL:AB158421 EMBL:AB158422
            EMBL:BC062225 IPI:IPI00201505 PIR:JC2512 RefSeq:NP_072120.1
            UniGene:Rn.6187 ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
            PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
            InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
            Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
        Length = 177

 Score = 124 (48.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    74 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 120

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   121 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 171

 Score = 102 (41.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 30/114 (26%), Positives = 40/114 (35%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C   +D        C  CG  GH  + C + +         +   C 
Sbjct:    54 CYRCGESGHLAKDCDLQEDA-------CYNCGRGGHIAKDCKEPKRE-------REQCCY 99

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C     +K +      HI    +K   C  CGE GH    C +
Sbjct:   100 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINCSK 152

 Score = 44 (20.5 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query:    71 GPNGQYIRELPCPSCRGRG 89
             G +G + RE P    RGRG
Sbjct:    10 GRSGHWARECPTGGGRGRG 28


>MGI|MGI:88431 [details] [associations]
            symbol:Cnbp "cellular nucleic acid binding protein"
            species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
            "single-stranded DNA binding" evidence=ISO] [GO:0003727
            "single-stranded RNA binding" evidence=ISO] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            MGI:MGI:88431 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
            GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
            GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
            CTD:7555 HOVERGEN:HBG000397 ChiTaRS:CNBP EMBL:L12693 EMBL:Z11870
            EMBL:X63866 EMBL:Z11871 EMBL:U20326 EMBL:AY176064 EMBL:AK075760
            EMBL:AK078427 EMBL:BC058723 IPI:IPI00137229 IPI:IPI00330767
            IPI:IPI00454151 PIR:I48297 PIR:I48298 PIR:I49259
            RefSeq:NP_001103215.1 RefSeq:NP_038521.1 UniGene:Mm.290251
            ProteinModelPortal:P53996 SMR:P53996 IntAct:P53996 STRING:P53996
            PhosphoSite:P53996 PaxDb:P53996 PRIDE:P53996
            Ensembl:ENSMUST00000032138 Ensembl:ENSMUST00000113619 GeneID:12785
            KEGG:mmu:12785 InParanoid:P53996 OMA:CPNGQGG NextBio:282182
            Bgee:P53996 CleanEx:MM_CNBP Genevestigator:P53996
            GermOnline:ENSMUSG00000030057 Uniprot:P53996
        Length = 178

 Score = 124 (48.7 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    75 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 121

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   122 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 172

 Score = 104 (41.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 31/114 (27%), Positives = 43/114 (37%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C +L++   D    C  CG  GH  + C + +         +   C 
Sbjct:    54 CYRCGESGHLAKDC-DLQE---DEA--CYNCGRGGHIAKDCKEPKRE-------REQCCY 100

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C     +K +      HI    +K   C  CGE GH    C +
Sbjct:   101 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINCSK 153

 Score = 44 (20.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query:    71 GPNGQYIRELPCPSCRGRG 89
             G +G + RE P    RGRG
Sbjct:    10 GRSGHWARECPTGGGRGRG 28


>UNIPROTKB|E2RPD7 [details] [associations]
            symbol:CNBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
            GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
            GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00510000047065 OMA:CPNGQGG EMBL:AAEX03012021
            UniGene:Cfa.4499 ProteinModelPortal:E2RPD7 PRIDE:E2RPD7
            Ensembl:ENSCAFT00000006937 NextBio:20852160 Uniprot:E2RPD7
        Length = 179

 Score = 124 (48.7 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    76 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 122

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   123 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 173

 Score = 105 (42.0 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
 Identities = 30/114 (26%), Positives = 43/114 (37%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C +L++ +      C  CG  GH  + C + +         +   C 
Sbjct:    54 CYRCGESGHLAKDC-DLQEDVE----ACYNCGRGGHIAKDCKEPKRE-------REQCCY 101

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C     +K +      HI    +K   C  CGE GH    C +
Sbjct:   102 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINCSK 154

 Score = 44 (20.5 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query:    71 GPNGQYIRELPCPSCRGRG 89
             G +G + RE P    RGRG
Sbjct:    10 GRSGHWARECPTGGGRGRG 28


>UNIPROTKB|F8WFK2 [details] [associations]
            symbol:Cnbp "Cellular nucleic acid-binding protein"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            RGD:621807 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
            IPI:IPI00201505 ProteinModelPortal:F8WFK2 SMR:F8WFK2
            Ensembl:ENSRNOT00000013884 Uniprot:F8WFK2
        Length = 179

 Score = 124 (48.7 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
 Identities = 38/114 (33%), Positives = 49/114 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    76 CYNCGRGGHIAKDCKEPK---REREQCCYNCGKPGHLARDCD------H----ADEQKCY 122

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTC--TCRFCGEKGHNIRTC 367
              C + GH ++ C +V    R    G  H+  + SKT    C  CGE GH  R C
Sbjct:   123 SCGEFGHIQKDCTKVKCY-RCGETG--HVAINCSKTSEVNCYRCGESGHLAREC 173

 Score = 105 (42.0 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
 Identities = 30/114 (26%), Positives = 43/114 (37%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C +L++ +      C  CG  GH  + C + +         +   C 
Sbjct:    54 CYRCGESGHLAKDC-DLQEDVE----ACYNCGRGGHIAKDCKEPKRE-------REQCCY 101

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C     +K +      HI    +K   C  CGE GH    C +
Sbjct:   102 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINCSK 154

 Score = 44 (20.5 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
 Identities = 9/19 (47%), Positives = 11/19 (57%)

Query:    71 GPNGQYIRELPCPSCRGRG 89
             G +G + RE P    RGRG
Sbjct:    10 GRSGHWARECPTGGGRGRG 28


>ZFIN|ZDB-GENE-030131-5045 [details] [associations]
            symbol:cnbpa "CCHC-type zinc finger, nucleic acid
            binding protein a" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0060322 "head development" evidence=IMP]
            [GO:0014029 "neural crest formation" evidence=IMP] [GO:0014036
            "neural crest cell fate specification" evidence=IMP] [GO:0051216
            "cartilage development" evidence=IMP] [GO:0003697 "single-stranded
            DNA binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            ZFIN:ZDB-GENE-030131-5045 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
            GO:GO:0003697 GO:GO:0051216 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 HOVERGEN:HBG000397 GO:GO:0060322 GO:GO:0014036
            InterPro:IPR025836 Pfam:PF14392 EMBL:AY228240 IPI:IPI00481422
            UniGene:Dr.31379 STRING:Q801Z9 InParanoid:Q801Z9
            ArrayExpress:Q801Z9 Uniprot:Q801Z9
        Length = 163

 Score = 122 (48.0 bits), Expect = 5.4e-07, P = 5.4e-07
 Identities = 41/132 (31%), Positives = 51/132 (38%)

Query:   256 CKHCGREGHRKFYCPELKDGL-TDRG----FKCRLCGERGHNRRTCPKSRLSYHN----G 306
             C  CGR GH    CP    G    RG      C  CGE+GH  R C ++  + +N    G
Sbjct:     8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCHRSG 67

Query:   307 TVS------KHHR---CQICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFC 357
              +S      K  R   C  C + GH  R C     +K +   G  H      K   C  C
Sbjct:    68 HISRDCKEPKKEREQCCYNCGKAGHVARDCDHANEQKCYSCGGFGHFQKLCDKV-KCYRC 126

Query:   358 GEKGHNIRTCPR 369
             GE GH    C +
Sbjct:   127 GEIGHVAVQCSK 138

 Score = 106 (42.4 bits), Expect = 0.00056, P = 0.00056
 Identities = 33/112 (29%), Positives = 44/112 (39%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +C R GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:    60 CYNCHRSGHISRDCKEPKK---EREQCCYNCGKAGHVARDCD------H----ANEQKCY 106

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTC 367
              C   GH ++ C +V    R    G   +  S +    C  CG+ GH  R C
Sbjct:   107 SCGGFGHFQKLCDKVKCY-RCGEIGHVAVQCSKATEVNCYNCGKTGHLARDC 157


>UNIPROTKB|E1BZR6 [details] [associations]
            symbol:ZCCHC9 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010923 "negative
            regulation of phosphatase activity" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GO:GO:0010923 CTD:84240 OMA:DSQEVRE
            GeneTree:ENSGT00510000047308 EMBL:AADN02047870 IPI:IPI00571897
            RefSeq:XP_424900.1 UniGene:Gga.34920 Ensembl:ENSGALT00000025157
            GeneID:427320 KEGG:gga:427320 NextBio:20828598 Uniprot:E1BZR6
        Length = 235

 Score = 132 (51.5 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 45/139 (32%), Positives = 62/139 (44%)

Query:   240 ENRQ-KRSIAMKGVRFYCKHCGREGHRKFYCPELKDGLTDRGFK-CRLCGERGHNRRTCP 297
             ENR+ +R  A K     C HC   GH    CP + +   D G   C  CG   H+   C 
Sbjct:    79 ENRRLRRQEARKNA-MVCFHCREPGHGVADCPAVLES-QDMGTGICYRCGSTEHDIGKC- 135

Query:   298 KSRLSYHNGTVSKHHRCQICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFC 357
             K+++    G    + +C IC + GH  R+CP        DN   K +   A   C CR C
Sbjct:   136 KAKIDPAVGAFP-YAKCFICGEMGHLSRSCP--------DN--PKGL--YAEGGC-CRLC 181

Query:   358 GEKGHNIRTCPR-RNLEQL 375
             G   H  + CP  +NL+Q+
Sbjct:   182 GSVEHYRKDCPENQNLDQV 200


>WB|WBGene00044329 [details] [associations]
            symbol:cpsf-4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0009792 "embryo development ending
            in birth or egg hatching" evidence=IMP] [GO:0051301 "cell division"
            evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0040027 "negative
            regulation of vulval development" evidence=IMP] InterPro:IPR000571
            InterPro:IPR001878 Pfam:PF00098 Pfam:PF00642 PROSITE:PS50103
            PROSITE:PS50158 SMART:SM00343 SMART:SM00356 GO:GO:0009792
            GO:GO:0002119 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            GO:GO:0000910 Gene3D:4.10.60.10 SUPFAM:SSF57756 eggNOG:COG5084
            GO:GO:0040027 HOGENOM:HOG000212457 GeneTree:ENSGT00390000009627
            KO:K14404 OMA:PLDQVTC EMBL:Z68297 RefSeq:NP_001023126.1
            ProteinModelPortal:Q7YTG9 SMR:Q7YTG9 IntAct:Q7YTG9
            MINT:MINT-6669146 STRING:Q7YTG9 PaxDb:Q7YTG9
            EnsemblMetazoa:F11A10.8 GeneID:178151 KEGG:cel:CELE_F11A10.8
            UCSC:F11A10.8 CTD:178151 WormBase:F11A10.8 InParanoid:Q7YTG9
            NextBio:899930 Uniprot:Q7YTG9
        Length = 302

 Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 42/150 (28%), Positives = 59/150 (39%)

Query:   238 DPENRQKRSIAMKGVRFYCKH---CGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRR 294
             DPE + K        R +C+H   C     R+  CP    G   +G  C+          
Sbjct:   130 DPETKMKDCPWYD--RGFCRHGPYCKHRHRRRAVCPNYLAGFCLQGPDCQYA-HPSFGLP 186

Query:   295 TCPKSRLSYHNGTVSKHHRCQICRQRGHNRRTCPQVTGEKRHDNNGQKH------IPTSA 348
             +     +S+   T S+   C  C +RGH   TCP + G+ R  N    H      IP   
Sbjct:   187 SFENIAVSHAKPTYSQAITCHNCHERGHKATTCPHLPGQTRQ-NQDHHHRVDLSLIPDKK 245

Query:   349 SKT-CTCRFCGEKGHNIRTCPRRNLEQLKS 377
             + +  TC  CGEKGH    C +  L  L +
Sbjct:   246 NLSDVTCYKCGEKGHYANRCHKGALAFLSN 275


>WB|WBGene00019537 [details] [associations]
            symbol:K08D12.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
            [GO:0040011 "locomotion" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 GO:GO:0009792 GO:GO:0040007
            GO:GO:0002119 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
            GO:GO:0000003 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS
            GeneTree:ENSGT00510000047065 EMBL:FO081610 GeneID:176979
            KEGG:cel:CELE_K08D12.3 UCSC:K08D12.3a.1 CTD:176979 NextBio:894830
            RefSeq:NP_741323.1 ProteinModelPortal:Q966I7 SMR:Q966I7
            STRING:Q966I7 PRIDE:Q966I7 EnsemblMetazoa:K08D12.3a.1
            EnsemblMetazoa:K08D12.3a.2 WormBase:K08D12.3a InParanoid:Q966I7
            ArrayExpress:Q966I7 Uniprot:Q966I7
        Length = 151

 Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 36/117 (30%), Positives = 40/117 (34%)

Query:   256 CKHCGREGHRKFYCPELK-DGLT---DRGFKCRLCGERGHNRRTCPKSRLSY-HNGTVSK 310
             C  C + GH    CP  + DG       G  C  C E GH  R CPK        G    
Sbjct:     6 CYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGG 65

Query:   311 HHRCQICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTC 367
                C  C  RGH  R CP    E      G +     +     C  CG  GH  R C
Sbjct:    66 GGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISREC 122


>UNIPROTKB|G3MZ41 [details] [associations]
            symbol:ZCCHC13 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00510000047065 OMA:SSKECFK EMBL:DAAA02072583
            Ensembl:ENSBTAT00000001124 Uniprot:G3MZ41
        Length = 175

 Score = 121 (47.7 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 36/114 (31%), Positives = 46/114 (40%)

Query:   256 CKHCGREGHRKFYCPELK-DGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRC 314
             C +CG+ GH    C E K +G  +R   C  CG  GH  R C +           +  +C
Sbjct:    72 CYNCGKSGHIAKDCAEPKREG--ERC--CYTCGRPGHLARDCDRQ----------EERKC 117

Query:   315 QICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCP 368
               C + GH ++ C QV    R    G   I         C  CGE GH  R CP
Sbjct:   118 YSCGKSGHIQKYCTQVKCY-RCGEIGHVAINCRKMNEVNCYRCGESGHLTRECP 170


>ZFIN|ZDB-GENE-030102-2 [details] [associations]
            symbol:zcchc7 "zinc finger, CCHC domain containing 7"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 ZFIN:ZDB-GENE-030102-2
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GeneTree:ENSGT00510000048226 EMBL:BX511134
            EMBL:BX284619 EMBL:CR786570 IPI:IPI00996291
            Ensembl:ENSDART00000129066 ArrayExpress:F1QLY2 Bgee:F1QLY2
            Uniprot:F1QLY2
        Length = 627

 Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 40/131 (30%), Positives = 51/131 (38%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHN--GTVSK--- 310
             C++C + GH    CP LK         C LCG RGH  RTCP    S  +  G  S    
Sbjct:   276 CRNCNKTGHLSKNCPTLKKVPC-----CSLCGLRGHLLRTCPNRHCSNCSLPGHTSDDCL 330

Query:   311 -----HHRCQICRQRGHNRRTCPQVTGEKRHDNNG---QKHI-PTSASKTCTCRFCGEKG 361
                  + RC  C   GH    CPQ+  +          +K   P +  K   C  C  KG
Sbjct:   331 ERAFWYKRCHRCGMTGHFIDACPQIWRQYHLTTTAGPIRKSADPKACQKRAYCYNCSRKG 390

Query:   362 HNIRTCPRRNL 372
             H    C +R +
Sbjct:   391 HFGHQCSQRRM 401

 Score = 117 (46.2 bits), Expect = 0.00088, P = 0.00088
 Identities = 33/101 (32%), Positives = 42/101 (41%)

Query:   277 TDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQICRQRGHNRRTCPQVTGEKRH 336
             T++   CR C + GH  + CP         T+ K   C +C  RGH  RTCP      RH
Sbjct:   270 TEKSITCRNCNKTGHLSKNCP---------TLKKVPCCSLCGLRGHLLRTCPN-----RH 315

Query:   337 DNNGQKHIPTSASKTCT--------CRFCGEKGHNIRTCPR 369
              +N    +P   S  C         C  CG  GH I  CP+
Sbjct:   316 CSNCS--LPGHTSDDCLERAFWYKRCHRCGMTGHFIDACPQ 354


>SGD|S000002334 [details] [associations]
            symbol:AIR2 "RNA-binding subunit of the TRAMP nuclear RNA
            surveillance complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0030674 "protein binding, bridging" evidence=IMP] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IDA] [GO:0031499 "TRAMP complex" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IGI;IDA] [GO:0043629 "ncRNA
            polyadenylation" evidence=IDA] [GO:0071039 "nuclear
            polyadenylation-dependent CUT catabolic process" evidence=IGI]
            [GO:0071036 "nuclear polyadenylation-dependent snoRNA catabolic
            process" evidence=IGI] [GO:0071037 "nuclear
            polyadenylation-dependent snRNA catabolic process" evidence=IGI]
            [GO:0071031 "nuclear mRNA surveillance of mRNA 3'-end processing"
            evidence=IGI] [GO:0071038 "nuclear polyadenylation-dependent tRNA
            catabolic process" evidence=IDA] [GO:0071035 "nuclear
            polyadenylation-dependent rRNA catabolic process" evidence=IGI]
            [GO:0006400 "tRNA modification" evidence=IMP] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 SGD:S000002334 GO:GO:0005730
            GO:GO:0046872 GO:GO:0008270 EMBL:BK006938 GO:GO:0030674
            GO:GO:0003723 GO:GO:0006400 eggNOG:COG5082 OrthoDB:EOG4F21BK
            GO:GO:0031499 Gene3D:4.10.60.10 InterPro:IPR016713
            PIRSF:PIRSF018162 SUPFAM:SSF57756 GeneTree:ENSGT00510000048226
            HOGENOM:HOG000000966 KO:K12597 GO:GO:0043629 GO:GO:0071031
            GO:GO:0071039 GO:GO:0071035 GO:GO:0071036 GO:GO:0071037
            GO:GO:0071038 EMBL:Z74223 EMBL:Z67750 PIR:S61037 RefSeq:NP_010106.1
            PDB:2LLI PDB:3NYB PDBsum:2LLI PDBsum:3NYB ProteinModelPortal:Q12476
            SMR:Q12476 DIP:DIP-2543N IntAct:Q12476 MINT:MINT-543316
            STRING:Q12476 PaxDb:Q12476 PeptideAtlas:Q12476 EnsemblFungi:YDL175C
            GeneID:851379 KEGG:sce:YDL175C CYGD:YDL175c
            EvolutionaryTrace:Q12476 NextBio:968516 Genevestigator:Q12476
            GermOnline:YDL175C Uniprot:Q12476
        Length = 344

 Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 39/146 (26%), Positives = 60/146 (41%)

Query:   248 AMKGVRFYCKHCGREGHRKFYCPEL---KDGLTD--------RGFKCRLCGERGHNRRTC 296
             A+K     C +C + GH K  CP +     G TD        +  +C  C E GH R  C
Sbjct:    55 AIKEAAPKCNNCSQRGHLKKDCPHIICSYCGATDDHYSRHCPKAIQCSKCDEVGHYRSQC 114

Query:   297 PKSRLSYHNGTVSKHHRCQICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSAS-KTCTCR 355
             P      H     K  +C +C+ + H++  CP +       ++ +K  P      T  C 
Sbjct:   115 P------HKW---KKVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVLPFHTIYCY 165

Query:   356 FCGEKGHNIRTCPRRNLEQLKSEEAS 381
              CG KGH    C  +   ++ +E+ S
Sbjct:   166 NCGGKGHFGDDCKEKRSSRVPNEDGS 191


>DICTYBASE|DDB_G0293328 [details] [associations]
            symbol:DDB_G0293328 "Cellular nucleic acid-binding
            protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 dictyBase:DDB_G0293328
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AAFI02000201
            RefSeq:XP_629203.1 ProteinModelPortal:Q54BY8 STRING:Q54BY8
            EnsemblProtists:DDB0191881 GeneID:8629162 KEGG:ddi:DDB_G0293328
            InParanoid:Q54BY8 OMA:CKEVGHI ProtClustDB:PTZ00368 Uniprot:Q54BY8
        Length = 131

 Score = 109 (43.4 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 35/129 (27%), Positives = 50/129 (38%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHH--R 313
             C  C   GH    CP+  +   DR   C +C   GH  R CP++       T  K    +
Sbjct:     9 CYKCKEVGHISRNCPKNPEA-GDRA--CYVCNVVGHLSRECPQNP----QPTFEKKDPIK 61

Query:   314 CQICRQRGHNRRTCPQVTGEKRHDNNGQKHI----PTSASK-----TCTCRFCGEKGHNI 364
             C  C   GH  R C +    K ++  G  HI    P+ +++        C  C + GH  
Sbjct:    62 CYQCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCPSPSTRGQGRDAAKCYKCNQPGHIA 121

Query:   365 RTCPRRNLE 373
             + CP    E
Sbjct:   122 KACPENQSE 130


>UNIPROTKB|J9NRQ2 [details] [associations]
            symbol:ZCCHC13 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AAEX03026520
            Ensembl:ENSCAFT00000049751 OMA:EEQKCYS Uniprot:J9NRQ2
        Length = 146

 Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 30/114 (26%), Positives = 43/114 (37%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG+ GH    C  L+D        C  CG  GH  + C + +         +   C 
Sbjct:    48 CYRCGKSGHHAKNCDLLED-------ICYNCGRSGHIAKDCIEPKRE-------REQCCY 93

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
              C + GH  R C +   +K +      HI    ++   C  CGE GH    C +
Sbjct:    94 TCGRPGHLARDCDRQEEQKCYSCGEYGHIQKDCTQV-KCYRCGETGHVAINCSK 146


>FB|FBgn0034802 [details] [associations]
            symbol:CG3800 species:7227 "Drosophila melanogaster"
            [GO:0003676 "nucleic acid binding" evidence=ISS;NAS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            EMBL:AE013599 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
            GeneTree:ENSGT00510000047065 OMA:QCYNCGE EMBL:AY075371
            EMBL:AY118596 RefSeq:NP_001188992.1 RefSeq:NP_611739.1
            UniGene:Dm.5513 ProteinModelPortal:Q8T8R1 SMR:Q8T8R1
            MINT:MINT-943666 STRING:Q8T8R1 PaxDb:Q8T8R1 PRIDE:Q8T8R1
            EnsemblMetazoa:FBtr0071994 EnsemblMetazoa:FBtr0303464 GeneID:37646
            KEGG:dme:Dmel_CG3800 UCSC:CG3800-RA FlyBase:FBgn0034802
            InParanoid:Q8T8R1 OrthoDB:EOG40RXZ0 PhylomeDB:Q8T8R1
            GenomeRNAi:37646 NextBio:804714 Bgee:Q8T8R1 Uniprot:Q8T8R1
        Length = 165

 Score = 115 (45.5 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 34/106 (32%), Positives = 46/106 (43%)

Query:   282 KCRLCGERGHNRRTCPK-SRLSYH-NGT--VSK------HHRCQICRQRGHNRRTCPQVT 331
             KC  C + GH  R CP+ +   Y  NG   +SK      +  C  C + GH  R CP+  
Sbjct:    56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGHWVRNCPEAV 115

Query:   332 GEKRHDN------NGQKHIPTSASKTC-TCRFCGEKGHNIRTCPRR 370
              E+   N      N   HI  +  +T  TC  CG+ GH  R C  +
Sbjct:   116 NERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRRECDEK 161


>ZFIN|ZDB-GENE-030131-7782 [details] [associations]
            symbol:cnbpb "CCHC-type zinc finger, nucleic acid
            binding protein b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            ZFIN:ZDB-GENE-030131-7782 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
            InterPro:IPR025836 Pfam:PF14392 EMBL:CR855375 IPI:IPI00862287
            Ensembl:ENSDART00000104520 Bgee:E7FCQ0 Uniprot:E7FCQ0
        Length = 243

 Score = 121 (47.7 bits), Expect = 5.4e-05, P = 5.4e-05
 Identities = 33/120 (27%), Positives = 43/120 (35%)

Query:   250 KGVRFYCKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVS 309
             +G   +C  CG  GH    C   +D        C  CG  GH  R C + +         
Sbjct:   114 RGKDLFCYRCGEPGHVARDCERTEDA-------CYNCGRGGHISRDCKEPKKE------- 159

Query:   310 KHHRCQICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPR 369
             +   C  C + GH  R C     +K +   G  HI     K   C  CGE GH    C +
Sbjct:   160 REQVCYNCGKAGHMARDCDHANEQKCYSCGGFGHIQKGCEKV-KCYRCGEIGHVAVQCSK 218

 Score = 112 (44.5 bits), Expect = 0.00060, P = 0.00060
 Identities = 33/112 (29%), Positives = 45/112 (40%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C E K    +R   C  CG+ GH  R C       H    +   +C 
Sbjct:   140 CYNCGRGGHISRDCKEPKK---EREQVCYNCGKAGHMARDCD------H----ANEQKCY 186

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTC 367
              C   GH ++ C +V    R    G   +  S +    C  CG+ GH  + C
Sbjct:   187 SCGGFGHIQKGCEKVKCY-RCGEIGHVAVQCSKASEVNCYNCGKSGHVAKEC 237


>TAIR|locus:2078526 [details] [associations]
            symbol:AT3G42860 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=RCA] [GO:0009640 "photomorphogenesis"
            evidence=RCA] [GO:0010212 "response to ionizing radiation"
            evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
            [GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
            "histone methylation" evidence=RCA] [GO:0016579 "protein
            deubiquitination" evidence=RCA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=RCA] InterPro:IPR001878
            InterPro:IPR010666 Pfam:PF00098 Pfam:PF06839 PROSITE:PS50158
            SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
            SUPFAM:SSF57756 EMBL:AL138654 EMBL:AY065276 EMBL:AY133785
            IPI:IPI00532574 PIR:T47344 RefSeq:NP_189872.1 UniGene:At.28534
            ProteinModelPortal:Q9M1L9 SMR:Q9M1L9 EnsemblPlants:AT3G42860.1
            GeneID:823332 KEGG:ath:AT3G42860 TAIR:At3g42860
            HOGENOM:HOG000006218 InParanoid:Q9M1L9 OMA:CGFFKWC PhylomeDB:Q9M1L9
            ProtClustDB:CLSN2684249 ArrayExpress:Q9M1L9 Genevestigator:Q9M1L9
            Uniprot:Q9M1L9
        Length = 372

 Score = 124 (48.7 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 46/148 (31%), Positives = 58/148 (39%)

Query:   229 SETLKAFFSDPENRQKRSIAMKGVRFYCKHCGREGHRKFYCPELKD-G---LTDRGFKCR 284
             S T  + F D + R  ++ A  G    C  CG+EGH    C    D G    T     C 
Sbjct:   215 SVTKNSNFGDSDTRGYQN-AKTGTP--CYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCF 271

Query:   285 LCGERGHNRRTCP--KSRLSYHNGTV---SKHHRCQICRQRGHNRRTCPQVTGEKRHDNN 339
              CG+ GH  R C        Y  G +   S    C  C ++GH  R C   TG+  +   
Sbjct:   272 KCGKPGHWSRDCTAQSGNPKYEPGQMKSSSSSGECYKCGKQGHWSRDC---TGQSSNQQF 328

Query:   340 GQKHIPTSASKTCTCRFCGEKGHNIRTC 367
              Q     S S T  C  CG+ GH  R C
Sbjct:   329 -QSGQAKSTSSTGDCYKCGKAGHWSRDC 355


>TAIR|locus:2079859 [details] [associations]
            symbol:AT3G43590 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
            SUPFAM:SSF57756 EMBL:AL391734 EMBL:AY099824 EMBL:BT002203
            IPI:IPI00517919 RefSeq:NP_189945.1 UniGene:At.36254
            ProteinModelPortal:Q9FYD1 SMR:Q9FYD1 IntAct:Q9FYD1 PRIDE:Q9FYD1
            EnsemblPlants:AT3G43590.1 GeneID:823456 KEGG:ath:AT3G43590
            TAIR:At3g43590 HOGENOM:HOG000071063 InParanoid:Q9FYD1 OMA:RECPNSS
            PhylomeDB:Q9FYD1 ProtClustDB:CLSN2684404 ArrayExpress:Q9FYD1
            Genevestigator:Q9FYD1 Uniprot:Q9FYD1
        Length = 551

 Score = 126 (49.4 bits), Expect = 7.5e-05, P = 7.5e-05
 Identities = 39/122 (31%), Positives = 50/122 (40%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG +GH  F CP      T R   C +CG   H  + C            SK H C 
Sbjct:   168 CYSCGEQGHTSFNCPTP----TKRRKPCFICGSLEHGAKQC------------SKGHDCY 211

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTCPRR-NLEQ 374
             IC++ GH  + CP    +K    NG        SK   C  CG+ GH++  C    + E 
Sbjct:   212 ICKKTGHRAKDCP----DKY--KNG--------SKGAVCLRCGDFGHDMILCKYEYSKED 257

Query:   375 LK 376
             LK
Sbjct:   258 LK 259


>ZFIN|ZDB-GENE-031030-9 [details] [associations]
            symbol:zcchc9 "zinc finger, CCHC domain containing 9"
            species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 ZFIN:ZDB-GENE-031030-9 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            InterPro:IPR025836 Pfam:PF14392 HOGENOM:HOG000059608 CTD:84240
            HOVERGEN:HBG056034 OrthoDB:EOG49W2G3 EMBL:BC049028 IPI:IPI00484605
            RefSeq:NP_938184.1 UniGene:Dr.79609 ProteinModelPortal:Q7ZUI6
            STRING:Q7ZUI6 GeneID:386639 KEGG:dre:386639 InParanoid:Q7ZUI6
            NextBio:20813967 ArrayExpress:Q7ZUI6 Uniprot:Q7ZUI6
        Length = 256

 Score = 120 (47.3 bits), Expect = 8.3e-05, P = 8.3e-05
 Identities = 39/130 (30%), Positives = 55/130 (42%)

Query:   240 ENRQKRSIAMKGVRFYCKHCGREGHRKFYCPELK-DGLTDRGFKCRLCGERGHNRRTCPK 298
             ENR+ +    K     C +C + GH    CPE   D    RG  C  CG   H  + C +
Sbjct:   101 ENRRIKRQNTKKSNMICFNCRKPGHGLADCPEANNDEEMGRGI-CYRCGSTEHEIQRC-R 158

Query:   299 SRLSYHNGTVSKHHRCQICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCG 358
             +++    G    + +C +C Q GH  + CP        DN   K +   A+  C CR CG
Sbjct:   159 AKVDPAMGNYP-YAKCFVCGQTGHLSKACP--------DN--PKGL--YAAGGC-CRVCG 204

Query:   359 EKGHNIRTCP 368
                H  + CP
Sbjct:   205 SVEHFQKDCP 214


>UNIPROTKB|F1NI84 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
            GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AADN02013931
            IPI:IPI00819060 Ensembl:ENSGALT00000008010 ArrayExpress:F1NI84
            Uniprot:F1NI84
        Length = 105

 Score = 101 (40.6 bits), Expect = 0.00010, P = 0.00010
 Identities = 30/112 (26%), Positives = 39/112 (34%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  CG  GH    C   +D        C  CG  GH  + C + +         +   C 
Sbjct:     9 CYRCGESGHLAKDCDLQEDA-------CYNCGRGGHIAKDCKEPKRE-------REQCCY 54

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTC 367
              C + GH  R C     +K +      HI    +K   C  CGE GH    C
Sbjct:    55 NCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKV-KCYRCGETGHVAINC 105


>ASPGD|ASPL0000040986 [details] [associations]
            symbol:AN9093 species:162425 "Emericella nidulans"
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0003729
            "mRNA binding" evidence=IEA] [GO:0045182 "translation regulator
            activity" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0042788 "polysomal ribosome" evidence=IEA]
            [GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 EMBL:BN001306 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 HOGENOM:HOG000186262 EnsemblFungi:CADANIAT00009521
            OMA:QAGHISR Uniprot:C8VH53
        Length = 233

 Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
 Identities = 37/120 (30%), Positives = 46/120 (38%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +C + GH    CP  +   T    +C  C   GH +  CP  RL+  NG      RC 
Sbjct:    28 CYNCKQPGHESSSCPRPR---TTETKQCYNCQGLGHVQADCPTLRLNGANG------RCY 78

Query:   316 ICRQRGHNRRTCP-------QVTGEKRHD-NNGQKHIPTSASKTCTCRFCGEKGHNIRTC 367
              C Q GH  R CP       + TG  R     G +       +  TC  CG   H  R C
Sbjct:    79 NCSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFRGGYGGYPRAATCYKCGGPNHFARDC 138


>CGD|CAL0002417 [details] [associations]
            symbol:GIS2 species:5476 "Candida albicans" [GO:0070417
            "cellular response to cold" evidence=IMP] [GO:0003676 "nucleic acid
            binding" evidence=NAS] [GO:0071470 "cellular response to osmotic
            stress" evidence=IMP] [GO:0035690 "cellular response to drug"
            evidence=IMP] [GO:0042788 "polysomal ribosome" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0000747 "conjugation with cellular fusion"
            evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
            fusion" evidence=IEA] [GO:0045727 "positive regulation of
            translation" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0045182
            "translation regulator activity" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 CGD:CAL0002417
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0035690
            EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470 GO:GO:0070417
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
            RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
            GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
            KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
        Length = 175

 Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
 Identities = 29/112 (25%), Positives = 43/112 (38%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +C + GH    CP+ K     +   C  CG+ GH +  CP        G      +C 
Sbjct:    29 CYNCHKPGHESNDCPDPKQNTAKQ---CYSCGDVGHIQTECPNQA----QGA-----KCY 76

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTC 367
              C Q GH  + C        +  + ++  P+  +   TC  CG   H  R C
Sbjct:    77 NCGQFGHISKNCDSAPSSTNNAPSFKR--PSGRASGTTCYKCGGPNHFARDC 126


>UNIPROTKB|Q59YJ9 [details] [associations]
            symbol:GIS2 "Putative uncharacterized protein GIS2"
            species:237561 "Candida albicans SC5314" [GO:0003676 "nucleic acid
            binding" evidence=NAS] [GO:0035690 "cellular response to drug"
            evidence=IMP] [GO:0070417 "cellular response to cold" evidence=IMP]
            [GO:0071470 "cellular response to osmotic stress" evidence=IMP]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            CGD:CAL0002417 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            GO:GO:0035690 EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470
            GO:GO:0070417 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
            RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
            GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
            KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
        Length = 175

 Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
 Identities = 29/112 (25%), Positives = 43/112 (38%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +C + GH    CP+ K     +   C  CG+ GH +  CP        G      +C 
Sbjct:    29 CYNCHKPGHESNDCPDPKQNTAKQ---CYSCGDVGHIQTECPNQA----QGA-----KCY 76

Query:   316 ICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEKGHNIRTC 367
              C Q GH  + C        +  + ++  P+  +   TC  CG   H  R C
Sbjct:    77 NCGQFGHISKNCDSAPSSTNNAPSFKR--PSGRASGTTCYKCGGPNHFARDC 126


>UNIPROTKB|F1RF07 [details] [associations]
            symbol:ZCCHC9 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0010923 "negative regulation of phosphatase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GO:GO:0010923 CTD:84240 OMA:DSQEVRE GeneTree:ENSGT00510000047308
            EMBL:CU928538 RefSeq:NP_001231149.1 UniGene:Ssc.1803
            Ensembl:ENSSSCT00000015433 GeneID:100514154 KEGG:ssc:100514154
            Uniprot:F1RF07
        Length = 270

 Score = 115 (45.5 bits), Expect = 0.00035, P = 0.00035
 Identities = 42/136 (30%), Positives = 57/136 (41%)

Query:   242 RQKRSIAMKGVRFYCKHCGREGHRKFYCPE-LKDGLTDRGFKCRLCGERGHNRRTCPKSR 300
             R KR  A K     C HC + GH    CP  L++     G  C  CG   H    C K++
Sbjct:   116 RLKRQAAKKNA-MVCFHCRQPGHGIADCPAALENQEMGTGI-CYRCGSTEHEIIKC-KAQ 172

Query:   301 LSYHNGTVSKHHRCQICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEK 360
             +    G      +C +C + GH  R+CP        DN   K +   A   C CR CG  
Sbjct:   173 VDPALGEFP-FAKCFVCGEMGHLSRSCP--------DN--PKGL--YADGGC-CRLCGSV 218

Query:   361 GHNIRTCPR-RNLEQL 375
              H  + CP  +N +Q+
Sbjct:   219 EHFKKDCPESKNSDQM 234


>UNIPROTKB|F6V033 [details] [associations]
            symbol:ZCCHC9 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            CTD:84240 OMA:DSQEVRE GeneTree:ENSGT00510000047308
            EMBL:AAEX03002099 RefSeq:XP_536305.1 Ensembl:ENSCAFT00000013818
            GeneID:479161 KEGG:cfa:479161 Uniprot:F6V033
        Length = 271

 Score = 115 (45.5 bits), Expect = 0.00036, P = 0.00036
 Identities = 41/136 (30%), Positives = 56/136 (41%)

Query:   242 RQKRSIAMKGVRFYCKHCGREGHRKFYCPELKDGLTDRGFK-CRLCGERGHNRRTCPKSR 300
             R KR  A K     C HC + GH    CP   +   D G   C  CG   H    C K++
Sbjct:   117 RLKRQAAKKNA-MVCFHCRKPGHGIADCPAALEN-QDMGTGICYRCGSTEHEITKC-KAK 173

Query:   301 LSYHNGTVSKHHRCQICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEK 360
             +    G      +C +C + GH  R+CP        DN   K +   A   C CR CG  
Sbjct:   174 VDPALGEFP-FAKCFVCGEMGHLSRSCP--------DN--PKGL--YADGGC-CRLCGSV 219

Query:   361 GHNIRTCPR-RNLEQL 375
              H  + CP  +N +++
Sbjct:   220 EHFKKDCPESQNSDRM 235


>MGI|MGI:2442912 [details] [associations]
            symbol:Zcchc7 "zinc finger, CCHC domain containing 7"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 MGI:MGI:2442912 GO:GO:0005737 GO:GO:0005730
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 EMBL:CH466565
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00510000048226 KO:K12597 CTD:84186
            HOGENOM:HOG000155768 OrthoDB:EOG4P5KBB OMA:EAQIANN EMBL:AK013175
            EMBL:AK043238 EMBL:AK050430 EMBL:AK157728 EMBL:AL805896
            EMBL:AL805914 EMBL:BC054405 EMBL:BC117020 EMBL:BC117022
            EMBL:BC144774 IPI:IPI00112298 IPI:IPI00227238 RefSeq:NP_613056.2
            UniGene:Mm.331576 UniGene:Mm.486647 ProteinModelPortal:B1AX39
            SMR:B1AX39 STRING:B1AX39 PhosphoSite:B1AX39 PRIDE:B1AX39
            Ensembl:ENSMUST00000107824 Ensembl:ENSMUST00000147272 GeneID:319885
            KEGG:mmu:319885 UCSC:uc008sry.2 UCSC:uc008ssa.2 InParanoid:B1AX39
            ChiTaRS:ZCCHC7 NextBio:395583 Bgee:B1AX39 Genevestigator:B1AX39
            Uniprot:B1AX39
        Length = 541

 Score = 119 (46.9 bits), Expect = 0.00043, P = 0.00043
 Identities = 35/131 (26%), Positives = 51/131 (38%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRC- 314
             C++C + GH    CP     L  +   C LC ERGH +  CP       +  +S +HRC 
Sbjct:   238 CRNCDKRGHLSKNCP-----LPQKVRACCLCSERGHLQYGCPARYCLDCSLPMSSNHRCF 292

Query:   315 ---------QICRQRGHNRRTCPQVTGEKRHDNN-G---QKHIPTSASKTCTCRFCGEKG 361
                        C   GH+   CP++  +       G   +   P+  S    C  C +KG
Sbjct:   293 ERLSWRKRCDRCDMIGHHADACPEIWRQYHLTTKPGPPKKPKTPSGQSALVYCYNCAQKG 352

Query:   362 HNIRTCPRRNL 372
             H    C  R +
Sbjct:   353 HYGHECTERRM 363


>TAIR|locus:2156647 [details] [associations]
            symbol:AT5G52380 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 EMBL:AB019226 Gene3D:4.10.60.10 SUPFAM:SSF57756
            InterPro:IPR025836 Pfam:PF14392 EMBL:BT025034 IPI:IPI00544651
            RefSeq:NP_200051.1 UniGene:At.29618 ProteinModelPortal:Q9FHC2
            SMR:Q9FHC2 PRIDE:Q9FHC2 EnsemblPlants:AT5G52380.1 GeneID:835314
            KEGG:ath:AT5G52380 TAIR:At5g52380 InParanoid:Q9FHC2 OMA:KLCYNCG
            PhylomeDB:Q9FHC2 ProtClustDB:CLSN2686088 Genevestigator:Q9FHC2
            Uniprot:Q9FHC2
        Length = 268

 Score = 113 (44.8 bits), Expect = 0.00058, P = 0.00058
 Identities = 37/143 (25%), Positives = 57/143 (39%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C  C  + H    CPE  +   +R   C  C  RGH+ + CP+      N   S+   C 
Sbjct:    76 CFICHSKTHIAKLCPEKSEW--ERNKICLQCRRRGHSLKNCPEK-----NNESSEKKLCY 128

Query:   316 ICRQRGHNRRTCP--QVTGEKRHDN----NGQKHIPTSASKT---------CTCRFCGEK 360
              C   GH+   CP     G  +  +     GQ HI  +  +          C C+ CG  
Sbjct:   129 NCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGGC-CKVCGSV 187

Query:   361 GHNIRTCPRR-NLEQLKSEEASQ 382
              H ++ CP + N E  + ++ S+
Sbjct:   188 AHLVKDCPDKFNQESAQPKKTSR 210


>SGD|S000005199 [details] [associations]
            symbol:GIS2 "Translational activator for mRNAs with internal
            ribosome entry sites" species:4932 "Saccharomyces cerevisiae"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA;IDA] [GO:0000932 "cytoplasmic mRNA
            processing body" evidence=IDA] [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0042788 "polysomal ribosome" evidence=IPI] [GO:0045182
            "translation regulator activity" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 SGD:S000005199 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003729 EMBL:BK006947 GO:GO:0045182
            GO:GO:0042788 GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GO:GO:0045727 EMBL:X96722 HOGENOM:HOG000186262
            KO:K09250 GeneTree:ENSGT00510000047065 EMBL:Z71531 EMBL:AY558002
            PIR:S63228 RefSeq:NP_014144.1 ProteinModelPortal:P53849 SMR:P53849
            DIP:DIP-2669N IntAct:P53849 MINT:MINT-2732013 STRING:P53849
            PaxDb:P53849 PeptideAtlas:P53849 EnsemblFungi:YNL255C GeneID:855466
            KEGG:sce:YNL255C CYGD:YNL255c OMA:QCYNCGE OrthoDB:EOG4SJ8Q6
            NextBio:979403 Genevestigator:P53849 GermOnline:YNL255C
            Uniprot:P53849
        Length = 153

 Score = 104 (41.7 bits), Expect = 0.00058, P = 0.00058
 Identities = 37/145 (25%), Positives = 56/145 (38%)

Query:   229 SETLKAFFSDPENRQKRSIAMKGVRF-YCKHCGREGHRKFYCPELKDGLTDRGFKCRLCG 287
             SE L    + P + Q      + V F  C +CG  GH +  C       T +  +C  C 
Sbjct:    21 SERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSEC-------TVQ--RCFNCN 71

Query:   288 ERGHNRRTCPKSRLSYHNGTVSKHHRCQICRQRGHNRRTCPQ---VTGEKRHDNNGQKHI 344
             + GH  R CP+ + +     VS    C  C    H  + C +   ++G K +      H+
Sbjct:    72 QTGHISRECPEPKKTSRFSKVS----CYKCGGPNHMAKDCMKEDGISGLKCYTCGQAGHM 127

Query:   345 PTSASKTCTCRFCGEKGHNIRTCPR 369
                      C  C E GH  + CP+
Sbjct:   128 SRDCQNDRLCYNCNETGHISKDCPK 152


>POMBASE|SPAC683.02c [details] [associations]
            symbol:SPAC683.02c "zf-CCHC type zinc finger protein"
            species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 PomBase:SPAC683.02c
            EMBL:CU329670 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            PIR:T50246 RefSeq:NP_594481.1 EnsemblFungi:SPAC683.02c.1
            GeneID:2543491 KEGG:spo:SPAC683.02c HOGENOM:HOG000059608
            OMA:FICHENG OrthoDB:EOG4P8JTN NextBio:20804503 Uniprot:Q9HFF2
        Length = 218

 Score = 104 (41.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
 Identities = 28/90 (31%), Positives = 40/90 (44%)

Query:   240 ENRQKRSIAMKGVRFYCKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKS 299
             E R+ R I  +    +C  C ++GH    CPE KD ++     C  CG + H+   C K 
Sbjct:    63 EYRRLRRINQRNRDKFCFACRQQGHIVQDCPEAKDNVSI----CFRCGSKEHSLNACSKK 118

Query:   300 RLSYHNGTVSKHHRCQICRQRGHNRRTCPQ 329
                   G + K  +C IC + GH    C Q
Sbjct:   119 ------GPL-KFAKCFICHENGHLSGQCEQ 141

 Score = 43 (20.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query:     2 KDKRFLVLYHSKRRVSFSPCSMSSTNDDS 30
             K KRFL     + +V   P + S+TN++S
Sbjct:     9 KRKRFLEATPYESKVLEQPKNSSNTNEES 37


>UNIPROTKB|Q8N3Z6 [details] [associations]
            symbol:ZCCHC7 "Zinc finger CCHC domain-containing protein
            7" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 EMBL:CH471071 Gene3D:4.10.60.10 SUPFAM:SSF57756
            KO:K12597 EMBL:AL158155 CTD:84186 OrthoDB:EOG4P5KBB EMBL:AK026264
            EMBL:AK074608 EMBL:AK315128 EMBL:AL512604 EMBL:BC022434
            EMBL:BC036940 EMBL:AF161349 IPI:IPI00166710 IPI:IPI00871360
            RefSeq:NP_115602.2 UniGene:Hs.654700 ProteinModelPortal:Q8N3Z6
            SMR:Q8N3Z6 MINT:MINT-1182798 STRING:Q8N3Z6 PhosphoSite:Q8N3Z6
            DMDM:226693603 PaxDb:Q8N3Z6 PRIDE:Q8N3Z6 DNASU:84186
            Ensembl:ENST00000322831 Ensembl:ENST00000336755 GeneID:84186
            KEGG:hsa:84186 UCSC:uc003zzq.3 UCSC:uc003zzs.1
            GeneCards:GC09P037120 HGNC:HGNC:26209 HPA:HPA020600 HPA:HPA021088
            HPA:HPA029522 neXtProt:NX_Q8N3Z6 PharmGKB:PA128394734
            eggNOG:NOG249334 HOVERGEN:HBG094757 InParanoid:Q8N3Z6 OMA:EAQIANN
            GenomeRNAi:84186 NextBio:73566 ArrayExpress:Q8N3Z6 Bgee:Q8N3Z6
            CleanEx:HS_ZCCHC7 Genevestigator:Q8N3Z6 GermOnline:ENSG00000147905
            Uniprot:Q8N3Z6
        Length = 543

 Score = 117 (46.2 bits), Expect = 0.00072, P = 0.00072
 Identities = 33/131 (25%), Positives = 50/131 (38%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSY-------HNGTV 308
             C++C + GH    CP     L  +  +C LC  RGH   +CP     Y        +  +
Sbjct:   243 CRNCDKRGHLSKNCP-----LPRKVRRCFLCSRRGHLLYSCPAPLCEYCPVPKMLDHSCL 297

Query:   309 SKHH---RCQICRQRGHNRRTCPQVTGEKRHDNN-GQKHIPTSASKTCT---CRFCGEKG 361
              +H    +C  C   GH    C ++  +       G    P + S+      C  C +KG
Sbjct:   298 FRHSWDKQCDRCHMLGHYTDACTEIWRQYHLTTKPGPPKKPKTPSRPSALAYCYHCAQKG 357

Query:   362 HNIRTCPRRNL 372
             H    CP R +
Sbjct:   358 HYGHECPEREV 368


>UNIPROTKB|Q8WW36 [details] [associations]
            symbol:ZCCHC13 "Zinc finger CCHC domain-containing protein
            13" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262
            HOVERGEN:HBG000397 EMBL:BC021176 IPI:IPI00397484 RefSeq:NP_976048.1
            UniGene:Hs.157231 ProteinModelPortal:Q8WW36 SMR:Q8WW36
            IntAct:Q8WW36 MINT:MINT-2879587 PhosphoSite:Q8WW36 DMDM:71152962
            PRIDE:Q8WW36 DNASU:389874 Ensembl:ENST00000339534 GeneID:389874
            KEGG:hsa:389874 UCSC:uc004ebs.4 CTD:389874 GeneCards:GC0XP073524
            HGNC:HGNC:31749 HPA:HPA003382 neXtProt:NX_Q8WW36
            PharmGKB:PA134926925 InParanoid:Q8WW36 OMA:SSKECFK PhylomeDB:Q8WW36
            GenomeRNAi:389874 NextBio:103180 Bgee:Q8WW36 CleanEx:HS_ZCCHC13
            Genevestigator:Q8WW36 GermOnline:ENSG00000187969 Uniprot:Q8WW36
        Length = 166

 Score = 100 (40.3 bits), Expect = 0.00074, Sum P(2) = 0.00074
 Identities = 25/75 (33%), Positives = 32/75 (42%)

Query:   256 CKHCGREGHRKFYCPELKDGLTDRGFKCRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQ 315
             C +CGR GH    C   KD   +R   C  CG  GH  R C +           K  +C 
Sbjct:    67 CYNCGRSGHIAKDC---KDPKRERRQHCYTCGRLGHLARDCDRQ----------KEQKCY 113

Query:   316 ICRQRGHNRRTCPQV 330
              C + GH ++ C QV
Sbjct:   114 SCGKLGHIQKDCAQV 128

 Score = 39 (18.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
 Identities = 13/51 (25%), Positives = 19/51 (37%)

Query:    71 GPNGQYIRELPCPSCRGR---GYTPCVECGIERTRSDCSLC--NGKGIMTC 116
             G +G + R  P     GR   G+    +CG       C  C  +G+    C
Sbjct:    10 GHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNC 60


>RGD|1307450 [details] [associations]
            symbol:Zcchc9 "zinc finger, CCHC domain containing 9"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0010923 "negative regulation of phosphatase activity"
            evidence=IEA;ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 RGD:1307450 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0010923
            EMBL:CH473955 HOGENOM:HOG000059608 CTD:84240 HOVERGEN:HBG056034
            OMA:DSQEVRE OrthoDB:EOG49W2G3 GeneTree:ENSGT00510000047308
            EMBL:BC083695 IPI:IPI00555221 RefSeq:NP_001013174.1
            UniGene:Rn.94285 Ensembl:ENSRNOT00000020111 GeneID:309986
            KEGG:rno:309986 UCSC:RGD:1307450 InParanoid:Q5XII6 NextBio:661527
            Genevestigator:Q5XII6 Uniprot:Q5XII6
        Length = 271

 Score = 112 (44.5 bits), Expect = 0.00078, P = 0.00078
 Identities = 37/136 (27%), Positives = 53/136 (38%)

Query:   242 RQKRSIAMKGVRFYCKHCGREGHRKFYCPELKDGLTDRGFK-CRLCGERGHNRRTCPKSR 300
             R KR  A K     C HC + GH    CP + +   D G   C  CG   H    C ++ 
Sbjct:   117 RLKRQAAKKNA-MVCFHCRQPGHGIADCPAVLES-QDMGTGICYRCGSTEHEMTKC-RAN 173

Query:   301 LSYHNGTVSKHHRCQICRQRGHNRRTCPQVTGEKRHDNNGQKHIPTSASKTCTCRFCGEK 360
             +    G      +C +C + GH  R+CP  T     D  G             C+ CG  
Sbjct:   174 VDPALGEFP-FAKCFVCGEMGHLSRSCPDNTKGVYADGGG-------------CKLCGSV 219

Query:   361 GHNIRTCPR-RNLEQL 375
              H  + CP  +N +++
Sbjct:   220 EHFKKDCPENQNSDRI 235


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      388       372   0.00087  117 3  11 22  0.40    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  41
  No. of states in DFA:  617 (66 KB)
  Total size of DFA:  277 KB (2142 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  33.83u 0.11s 33.94t   Elapsed:  00:00:35
  Total cpu time:  33.84u 0.11s 33.95t   Elapsed:  00:00:35
  Start:  Thu May  9 16:01:11 2013   End:  Thu May  9 16:01:46 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT5G20220 AT5G20220 AT5G20220	protein from Arabidopsis thaliana	2.6e-118
BLAST match view associations BLAST with CNBP CNBP CNBP cDNA FLJ61146, highly similar to Cellular nucleic acid-binding protein	protein from Homo sapiens	1.2e-10
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Bos taurus	8.2e-10
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	4.0e-09
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	8.8e-09
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Homo sapiens	4.7e-08
BLAST match view associations BLAST with Q4R501 Q4R501 Q4R501 Brain cDNA, clone: QnpA-14556, similar to human zinc finger protein 9 (a cellular retroviral nucleicacid binding protein) (ZNF9),	protein from Macaca fascicularis	4.7e-08
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Pongo abelii	4.7e-08
BLAST match view associations BLAST with Cnbp Cnbp Cnbp CCHC-type zinc finger, nucleic acid binding protein	gene from Rattus norvegicus	4.7e-08
BLAST match view associations BLAST with Cnbp Cnbp Cnbp Cellular nucleic acid-binding protein	protein from Rattus norvegicus	4.7e-08
BLAST match view associations BLAST with Cnbp Cnbp Cnbp cellular nucleic acid binding protein	protein from Mus musculus	5.9e-08
BLAST match view associations BLAST with CNBP CNBP CNBP Uncharacterized protein	protein from Canis lupus familiaris	7.2e-08
BLAST match view associations BLAST with cnbpa cnbpa cnbpa CCHC-type zinc finger, nucleic acid binding protein a	gene_product from Danio rerio	5.4e-07
BLAST match view associations BLAST with ZCCHC9 ZCCHC9 ZCCHC9 Uncharacterized protein	protein from Gallus gallus	2.5e-06
BLAST match view associations BLAST with cpsf-4 cpsf-4 cpsf-4	gene from Caenorhabditis elegans	2.5e-06
BLAST match view associations BLAST with K08D12.3 K08D12.3 K08D12.3	gene from Caenorhabditis elegans	3.1e-06
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Uncharacterized protein	protein from Bos taurus	6.9e-06
BLAST match view associations BLAST with zcchc7 zcchc7 zcchc7 zinc finger, CCHC domain containing 7	gene_product from Danio rerio	1.2e-05
BLAST match view associations BLAST with AIR2 AIR2 AIR2 RNA-binding subunit of the TRAMP nuclear RNA surveillance complex	gene from Saccharomyces cerevisiae	1.2e-05
BLAST match view associations BLAST with DDB_G0293328 DDB_G0293328 DDB_G0293328 Cellular nucleic acid-binding protein	gene from Dictyostelium discoideum	1.4e-05
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Uncharacterized protein	protein from Canis lupus familiaris	1.8e-05
BLAST match view associations BLAST with CG3800 CG3800 CG3800	protein from Drosophila melanogaster	2.8e-05
BLAST match view associations BLAST with cnbpb cnbpb cnbpb CCHC-type zinc finger, nucleic acid binding protein b	gene_product from Danio rerio	5.4e-05
BLAST match view associations BLAST with AT3G42860 AT3G42860 AT3G42860	protein from Arabidopsis thaliana	6.6e-05
BLAST match view associations BLAST with AT3G43590 AT3G43590 AT3G43590	protein from Arabidopsis thaliana	7.5e-05
BLAST match view associations BLAST with zcchc9 zcchc9 zcchc9 zinc finger, CCHC domain containing 9	gene_product from Danio rerio	8.3e-05
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	0.00010
BLAST match view associations BLAST with GIS2 GIS2 GIS2	gene_product from Candida albicans	0.00015
BLAST match view associations BLAST with GIS2 GIS2 GIS2 Putative uncharacterized protein GIS2	protein from Candida albicans SC5314	0.00015
BLAST match view associations BLAST with ZCCHC9 ZCCHC9 ZCCHC9 Uncharacterized protein	protein from Sus scrofa	0.00035
BLAST match view associations BLAST with ZCCHC9 ZCCHC9 ZCCHC9 Uncharacterized protein	protein from Canis lupus familiaris	0.00036
BLAST match view associations BLAST with Zcchc7 Zcchc7 Zcchc7 zinc finger, CCHC domain containing 7	protein from Mus musculus	0.00043
BLAST match view associations BLAST with AT5G52380 AT5G52380 AT5G52380	protein from Arabidopsis thaliana	0.00058
BLAST match view associations BLAST with GIS2 GIS2 GIS2 Translational activator for mRNAs with internal ribosome entry sites	gene from Saccharomyces cerevisiae	0.00058
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Zinc finger CCHC domain-containing protein 7	protein from Homo sapiens	0.00072
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Zinc finger CCHC domain-containing protein 13	protein from Homo sapiens	0.00074
BLAST match view associations BLAST with Zcchc9 Zcchc9 Zcchc9 zinc finger, CCHC domain containing 9	gene from Rattus norvegicus	0.00078