BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037637
MRIATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPM
LAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCVRVVVGGFVAVPIRWGK
VKIIENRLHINEGIKF

High Scoring Gene Products

Symbol, full name Information P value
AT1G21140 protein from Arabidopsis thaliana 7.1e-13
AT1G76800 protein from Arabidopsis thaliana 9.1e-13
AT3G43630 protein from Arabidopsis thaliana 1.2e-12
AT3G43660 protein from Arabidopsis thaliana 2.4e-12
AT3G25190 protein from Arabidopsis thaliana 1.8e-09

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037637
        (136 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2199572 - symbol:AT1G21140 "AT1G21140" species...   170  7.1e-13   1
TAIR|locus:2030091 - symbol:AT1G76800 "AT1G76800" species...   169  9.1e-13   1
TAIR|locus:2080193 - symbol:AT3G43630 "AT3G43630" species...   168  1.2e-12   1
TAIR|locus:2080213 - symbol:AT3G43660 "AT3G43660" species...   165  2.4e-12   1
TAIR|locus:2090305 - symbol:AT3G25190 "AT3G25190" species...   138  1.8e-09   1


>TAIR|locus:2199572 [details] [associations]
            symbol:AT1G21140 "AT1G21140" species:3702 "Arabidopsis
            thaliana" [GO:0071281 "cellular response to iron ion" evidence=IEP]
            [GO:0071369 "cellular response to ethylene stimulus" evidence=IEP]
            [GO:0071732 "cellular response to nitric oxide" evidence=IEP]
            [GO:0010039 "response to iron ion" evidence=IEP] Pfam:PF01988
            GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005774
            GO:GO:0071281 GO:GO:0006811 GO:GO:0071732 GO:GO:0055072
            GO:GO:0071369 eggNOG:COG1814 HOGENOM:HOG000096548
            InterPro:IPR008217 EMBL:AC012190 EMBL:BT003829 EMBL:BT005130
            IPI:IPI00532968 PIR:F86344 RefSeq:NP_173538.2 UniGene:At.41673
            IntAct:Q9LPU9 GeneID:838710 KEGG:ath:AT1G21140 TAIR:At1g21140
            InParanoid:Q9LPU9 OMA:MKRENGG PhylomeDB:Q9LPU9
            ProtClustDB:CLSN2682939 Genevestigator:Q9LPU9 Uniprot:Q9LPU9
        Length = 200

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 44/123 (35%), Positives = 67/123 (54%)

Query:     3 IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
             +A    VSV++Q D    Q +R+        ++  +PS +Q A AS+LAF     VP++A
Sbjct:    77 MAIGEFVSVYSQYDIEVAQMKRE---NGGQVEKEKLPSPMQAAAASALAFSLGAIVPLMA 133

Query:    63 AGFIKDHHLRSSIALVAAI-LSMVMLGIAGAALGKVPTMRSCXXXXXXXXXXXPIRWGKV 121
             A F+KD+H+R   A+VAA+ L++VM G  GA LGK P  +S             + +G  
Sbjct:   134 AAFVKDYHVRIG-AIVAAVTLALVMFGWLGAVLGKAPVFKSSARVLIGGWLAMAVTFGLT 192

Query:   122 KII 124
             K+I
Sbjct:   193 KLI 195


>TAIR|locus:2030091 [details] [associations]
            symbol:AT1G76800 "AT1G76800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0071281 "cellular response to
            iron ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
            stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
            oxide" evidence=IEP] [GO:0010039 "response to iron ion"
            evidence=IEP] Pfam:PF01988 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005774 GO:GO:0071281 GO:GO:0006811
            GO:GO:0071732 EMBL:AC010718 GO:GO:0055072 GO:GO:0071369
            eggNOG:COG1814 HOGENOM:HOG000096548 InterPro:IPR008217
            ProtClustDB:CLSN2682939 EMBL:BT014942 EMBL:BT015634 IPI:IPI00523449
            PIR:F96796 RefSeq:NP_177806.1 UniGene:At.34609 STRING:Q9SRD3
            GeneID:844014 KEGG:ath:AT1G76800 TAIR:At1g76800 InParanoid:Q9SRD3
            OMA:LMVFGWL PhylomeDB:Q9SRD3 Genevestigator:Q9SRD3 Uniprot:Q9SRD3
        Length = 196

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 44/123 (35%), Positives = 68/123 (55%)

Query:     3 IATSVLVSVHTQVDTINFQAERDFKMERSVD-QRTAVPSAIQIAVASSLAFLFWGKVPML 61
             +A    VSV++Q D    Q ERD     SV+ ++  +PS +Q A AS+LAF     VP+L
Sbjct:    74 MAIGEFVSVYSQYDIEVAQMERD-----SVEIEKEKLPSPMQAAAASALAFSAGAIVPLL 128

Query:    62 AAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCXXXXXXXXXXXPIRWGKV 121
             AA F+K++ +R    +VA  +++++ G  GAALGK P +RS             + +G  
Sbjct:   129 AAAFVKEYKMRIISVVVAVTVALMVFGWLGAALGKAPAVRSSARVLFGGWLAMAVTFGLT 188

Query:   122 KII 124
             K+I
Sbjct:   189 KLI 191


>TAIR|locus:2080193 [details] [associations]
            symbol:AT3G43630 "AT3G43630" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0010039
            "response to iron ion" evidence=IEP] Pfam:PF01988 GO:GO:0016021
            GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006811
            GO:GO:0010039 GO:GO:0055072 EMBL:AL138638 eggNOG:COG1814
            HOGENOM:HOG000096548 InterPro:IPR008217 ProtClustDB:CLSN2682939
            IPI:IPI00541652 PIR:T47399 RefSeq:NP_189949.1 UniGene:At.53700
            PRIDE:Q9M2C3 GeneID:823461 KEGG:ath:AT3G43630
            KEGG:dosa:Os04t0538400-01 TAIR:At3g43630 InParanoid:Q9M2C3
            OMA:HYFIGRI PhylomeDB:Q9M2C3 Genevestigator:Q9M2C3 Uniprot:Q9M2C3
        Length = 200

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 46/129 (35%), Positives = 70/129 (54%)

Query:     3 IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
             +A    VSV++Q D    Q +R+   E    ++  +PS  Q A AS+LAF     VP+LA
Sbjct:    74 MAIGEFVSVYSQYDIEVAQMKRETGGEI---EKEKLPSPTQAAAASALAFSLGAMVPLLA 130

Query:    63 AGFIKDHHLRSSIALVAAI-LSMVMLGIAGAALGKVPTMRSCXXXXXXXXXXXPIRWGKV 121
             A F+K++ +R   A+VAA+ L++VM G  GA LGK P ++S             I +G  
Sbjct:   131 AAFVKEYKVRIG-AIVAAVTLALVMFGWLGAVLGKAPVVKSSLRVLVGGWLAMAITYGFT 189

Query:   122 KIIENRLHI 130
             K+I +  H+
Sbjct:   190 KLIGSHSHM 198


>TAIR|locus:2080213 [details] [associations]
            symbol:AT3G43660 "AT3G43660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF01988 GO:GO:0016021 GO:GO:0005774 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006811 GO:GO:0055072 EMBL:AL138638
            eggNOG:COG1814 HOGENOM:HOG000096548 InterPro:IPR008217
            ProtClustDB:CLSN2682939 EMBL:BT010510 EMBL:AK176079 IPI:IPI00533160
            PIR:T47402 RefSeq:NP_189952.1 UniGene:At.36246 GeneID:823468
            KEGG:ath:AT3G43660 TAIR:At3g43660 InParanoid:Q9M2C0 OMA:IGEFISV
            PhylomeDB:Q9M2C0 Genevestigator:Q9M2C0 Uniprot:Q9M2C0
        Length = 198

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 40/122 (32%), Positives = 65/122 (53%)

Query:     3 IATSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPMLA 62
             +A    +SV++Q D    Q +R+   E   ++   +PS  Q A+AS+LAF     VP+LA
Sbjct:    75 MAIGEFISVYSQYDIEVAQMKRESGGETKKEK---LPSPTQAAIASALAFTLGAIVPLLA 131

Query:    63 AGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCXXXXXXXXXXXPIRWGKVK 122
             A F+K++ +R  + + A  L++VM G  GA LGK P ++S             I +G  K
Sbjct:   132 AAFVKEYKVRIGVIVAAVTLALVMFGWLGAVLGKAPVVKSLVRVLIGGWLAMAITFGFTK 191

Query:   123 II 124
             ++
Sbjct:   192 LV 193


>TAIR|locus:2090305 [details] [associations]
            symbol:AT3G25190 "AT3G25190" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0071281 "cellular response to
            iron ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
            stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
            oxide" evidence=IEP] [GO:0010039 "response to iron ion"
            evidence=IEP] Pfam:PF01988 GO:GO:0016021 GO:GO:0005774
            EMBL:CP002686 GO:GO:0071281 GO:GO:0006811 GO:GO:0071732
            GO:GO:0055072 GO:GO:0071369 EMBL:AB026647 eggNOG:COG1814
            HOGENOM:HOG000096548 InterPro:IPR008217 EMBL:AF375396 EMBL:AY066047
            IPI:IPI00532448 RefSeq:NP_189156.1 UniGene:At.28448 IntAct:Q9LSF6
            STRING:Q9LSF6 PRIDE:Q9LSF6 GeneID:822112 KEGG:ath:AT3G25190
            TAIR:At3g25190 InParanoid:Q9LSF6 OMA:VKAMLLV PhylomeDB:Q9LSF6
            ProtClustDB:CLSN2915429 Genevestigator:Q9LSF6 Uniprot:Q9LSF6
        Length = 219

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 38/131 (29%), Positives = 65/131 (49%)

Query:     3 IATSVLVSVHTQVDTINFQAERDFKMERSV---------DQRTAVPSAIQIAVASSLAFL 53
             +A    VSV TQ D    Q +R  + + S+         +++  +P+  Q A+AS+LAF 
Sbjct:    82 MAIGEFVSVCTQRDIETAQMKRAIEHKTSLSAIDEQEEEEKKERLPNPGQAAIASALAFS 141

Query:    54 FWGKVPMLAAGFIKDHHLRSSIALVAAILSMVMLGIAGAALGKVPTMRSCXXXXXXXXXX 113
                 +P+L A FI++H +R  +  V A +++V+ G+ GA LGK   ++S           
Sbjct:   142 VGAAMPLLGAVFIENHKVRMVVVAVVATIALVVFGVTGAVLGKTSVVKSSVRVVIGGWMA 201

Query:   114 XPIRWGKVKII 124
               + +G  K I
Sbjct:   202 MALTFGLTKFI 212


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.135   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      136       125   0.00091  102 3  11 22  0.42    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  540 (57 KB)
  Total size of DFA:  106 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.04u 0.13s 10.17t   Elapsed:  00:00:00
  Total cpu time:  10.04u 0.13s 10.17t   Elapsed:  00:00:00
  Start:  Thu May  9 16:15:47 2013   End:  Thu May  9 16:15:47 2013

Back to top