Query 037637
Match_columns 136
No_of_seqs 129 out of 850
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 04:14:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037637.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037637hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axti1 f.23.37.1 (I:1-35) Pho 28.2 25 0.0018 17.9 2.6 22 74-95 8-29 (35)
2 d1w53a_ a.186.1.2 (A:) Phospho 12.8 57 0.0042 19.6 2.2 40 5-45 15-54 (84)
3 d1pv7a_ f.38.1.2 (A:) Lactose 10.8 2.1E+02 0.016 18.7 8.8 64 39-102 7-78 (417)
4 d2p7tc1 f.14.1.1 (C:86-119) Po 6.5 1.3E+02 0.0098 14.5 1.7 10 113-122 23-32 (34)
5 d1wiwa_ c.80.1.1 (A:) Glucose- 6.3 2.4E+02 0.017 20.1 3.8 44 13-61 124-167 (284)
6 d2onkc1 f.58.1.1 (C:1-252) Mol 5.8 3.2E+02 0.023 17.8 4.2 11 99-109 82-92 (252)
7 d1rh1a2 f.1.1.1 (A:313-511) Co 5.4 2.5E+02 0.018 19.2 3.4 10 80-89 145-154 (199)
8 d2r6gf2 f.58.1.1 (F:261-504) M 5.4 4.1E+02 0.03 17.3 4.6 28 84-111 35-64 (244)
9 d2e74d2 f.23.12.1 (D:12-45) IS 5.2 2.2E+02 0.016 13.9 2.5 15 52-66 19-33 (34)
10 d1ip9a_ d.15.2.2 (A:) Bud emer 4.7 48 0.0035 19.5 -1.0 21 6-26 59-79 (85)
No 1
>d2axti1 f.23.37.1 (I:1-35) Photosystem II reaction center protein I, PsbI {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=28.19 E-value=25 Score=17.89 Aligned_cols=22 Identities=9% Similarity=0.205 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHhHHhc
Q 037637 74 SIALVAAILSMVMLGIAGAALG 95 (136)
Q Consensus 74 ~~s~~~~~~aL~~lG~~~a~~s 95 (136)
.-+++.-.++||++|.+..-=+
T Consensus 8 Vy~vV~fFv~lFiFGFLSnDP~ 29 (35)
T d2axti1 8 VYIVVTFFVLLFVFGFLSGDPA 29 (35)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTT
T ss_pred hhhHHHHHHHHHHHhhccCCCC
Confidence 3456667788999998775444
No 2
>d1w53a_ a.186.1.2 (A:) Phosphoserine phosphatase RsbU, N-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=12.78 E-value=57 Score=19.65 Aligned_cols=40 Identities=13% Similarity=-0.071 Sum_probs=25.6
Q ss_pred cchhhhhhhhhHHHHHHHHHHHHHhhcCCCCCCcccHHHHH
Q 037637 5 TSVLVSVHTQVDTINFQAERDFKMERSVDQRTAVPSAIQIA 45 (136)
Q Consensus 5 ~GeYlS~~sq~d~~~ae~~re~~e~~lGi~~~~~~~P~~aa 45 (136)
+-+|+..++|+..++++ +--++-++.++.|++.-+--++.
T Consensus 15 L~~Yl~~~~E~~Ly~~~-~fsre~iek~IsPEeIV~iHk~~ 54 (84)
T d1w53a_ 15 LSRYIAELTETSLYQAQ-KFSRKTIEHQIPPEEIISIHRKV 54 (84)
T ss_dssp HHHHHHHCCHHHHHHHH-HHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHH-HHHHHHHHcCCCHHHHHHHHHHH
Confidence 34799999999988654 33445566777776654443433
No 3
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=10.84 E-value=2.1e+02 Score=18.66 Aligned_cols=64 Identities=11% Similarity=0.078 Sum_probs=36.9
Q ss_pred ccHHHHHHHHHHHHHh-hhhhhhHHHhccc-----chhhHHHHH--HHHHHHHHHHHHHHhHHhcCCCchhH
Q 037637 39 PSAIQIAVASSLAFLF-WGKVPMLAAGFIK-----DHHLRSSIA--LVAAILSMVMLGIAGAALGKVPTMRS 102 (136)
Q Consensus 39 ~~P~~aal~s~~sF~~-Gg~vPllp~~~~~-----~~~~~~~~s--~~~~~~aL~~lG~~~a~~s~~~~~rs 102 (136)
+|=|.-++..|+.|.. +...|.+|..+.. +....+..+ .+...+.-...|.+.=|+++++...-
T Consensus 7 ~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l~~ 78 (417)
T d1pv7a_ 7 TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLW 78 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 3457777777766544 5567998865431 122233333 23344445667888888877765443
No 4
>d2p7tc1 f.14.1.1 (C:86-119) Potassium channel protein {Streptomyces lividans [TaxId: 1916]}
Probab=6.54 E-value=1.3e+02 Score=14.55 Aligned_cols=10 Identities=20% Similarity=0.199 Sum_probs=5.5
Q ss_pred HHHHHHHHHH
Q 037637 113 AVPIRWGKVK 122 (136)
Q Consensus 113 aa~vty~iG~ 122 (136)
|+..||++|+
T Consensus 23 aa~atwfvgr 32 (34)
T d2p7tc1 23 AALATWFVGR 32 (34)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhcc
Confidence 4445666664
No 5
>d1wiwa_ c.80.1.1 (A:) Glucose-6-phosphate isomerase-like protein TTHA1346 {Thermus thermophilus [TaxId: 274]}
Probab=6.26 E-value=2.4e+02 Score=20.06 Aligned_cols=44 Identities=9% Similarity=0.088 Sum_probs=28.4
Q ss_pred hhhHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHhhhhhhhH
Q 037637 13 TQVDTINFQAERDFKMERSVDQRTAVPSAIQIAVASSLAFLFWGKVPML 61 (136)
Q Consensus 13 sq~d~~~ae~~re~~e~~lGi~~~~~~~P~~aal~s~~sF~~Gg~vPll 61 (136)
.+.|.++.....++...+++-+.+...||-|. ++--+.+-+|++
T Consensus 124 ~~~d~~~~~~~L~~~a~r~~p~~e~~~NPAK~-----LA~~L~g~iPvI 167 (284)
T d1wiwa_ 124 REEVLRSVDEALLEERRRLGPEVPVEENPAKF-----LAYTLLERLPLF 167 (284)
T ss_dssp CHHHHHHHHHHHHHHHTTTSTTSCGGGCHHHH-----HHHHHTTSEEEE
T ss_pred cHHHHHHHHHHHHHHHHHhCcccccccCHHHH-----HHHHHhCCCCEE
Confidence 45666666555555555676666677899765 444556777876
No 6
>d2onkc1 f.58.1.1 (C:1-252) Molybdate/tungstate transport system permease protein WtpB (ModB) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=5.84 E-value=3.2e+02 Score=17.76 Aligned_cols=11 Identities=27% Similarity=0.262 Sum_probs=5.3
Q ss_pred chhHHHHHHHH
Q 037637 99 TMRSCVRVVVG 109 (136)
Q Consensus 99 ~~rs~~~~l~~ 109 (136)
+.|+..+.+..
T Consensus 82 ~~~~~~~~~~~ 92 (252)
T d2onkc1 82 PGKSVVEGIVD 92 (252)
T ss_dssp SSHHHHHHHHH
T ss_pred chhHHHHHHHH
Confidence 34555555443
No 7
>d1rh1a2 f.1.1.1 (A:313-511) Colicin B C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=5.44 E-value=2.5e+02 Score=19.19 Aligned_cols=10 Identities=0% Similarity=0.434 Sum_probs=3.8
Q ss_pred HHHHHHHHHH
Q 037637 80 AILSMVMLGI 89 (136)
Q Consensus 80 ~~~aL~~lG~ 89 (136)
+.++++++++
T Consensus 145 t~v~~~~fs~ 154 (199)
T d1rh1a2 145 SAVALSLFSL 154 (199)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 8
>d2r6gf2 f.58.1.1 (F:261-504) Maltose transport system permease protein MalF {Escherichia coli [TaxId: 562]}
Probab=5.36 E-value=4.1e+02 Score=17.27 Aligned_cols=28 Identities=21% Similarity=0.123 Sum_probs=17.6
Q ss_pred HHHHHHHhHHhcC-CC-chhHHHHHHHHHH
Q 037637 84 MVMLGIAGAALGK-VP-TMRSCVRVVVGGF 111 (136)
Q Consensus 84 L~~lG~~~a~~s~-~~-~~rs~~~~l~~G~ 111 (136)
-..+|...|++-. .+ +.|...|.++.--
T Consensus 35 ~~~~~~~lA~~l~~~~~~~~~~~~~~~~~p 64 (244)
T d2r6gf2 35 TVAVGMVLACLVQWEALRGKAVYRVLLILP 64 (244)
T ss_dssp HHHHHHHHHHHHTCSSSTTHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHhCcchhHHHHHHHHHHH
Confidence 3456777787765 44 4567777765443
No 9
>d2e74d2 f.23.12.1 (D:12-45) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Mastigocladus laminosus [TaxId: 83541]}
Probab=5.17 E-value=2.2e+02 Score=13.86 Aligned_cols=15 Identities=7% Similarity=-0.064 Sum_probs=12.1
Q ss_pred HHhhhhhhhHHHhcc
Q 037637 52 FLFWGKVPMLAAGFI 66 (136)
Q Consensus 52 F~~Gg~vPllp~~~~ 66 (136)
-.+|++-|+.-|++.
T Consensus 19 ~alg~lypvvkyfip 33 (34)
T d2e74d2 19 VALGALYPLVKYFIP 33 (34)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHhhhhhHHhhcCC
Confidence 468999999988864
No 10
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.67 E-value=48 Score=19.52 Aligned_cols=21 Identities=10% Similarity=-0.051 Sum_probs=0.0
Q ss_pred chhhhhhhhhHHHHHHHHHHH
Q 037637 6 SVLVSVHTQVDTINFQAERDF 26 (136)
Q Consensus 6 GeYlS~~sq~d~~~ae~~re~ 26 (136)
|+++...++.|++++..+.++
T Consensus 59 gd~v~i~sD~Dl~~ai~~~~k 79 (85)
T d1ip9a_ 59 GSGEEIKTDSQVSNIIQAKLK 79 (85)
T ss_dssp SCCSCCCSHHHHHHHHHTTCC
T ss_pred CCEEEEeCHHHHHHHHHhcCc
Done!