Query 037640
Match_columns 398
No_of_seqs 177 out of 1578
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 03:00:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037640.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037640hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02534 UDP-glycosyltransfera 100.0 1.1E-62 2.3E-67 487.7 39.9 392 6-397 93-487 (491)
2 PLN02992 coniferyl-alcohol glu 100.0 2.3E-59 5E-64 462.2 38.8 361 9-396 81-469 (481)
3 PLN03015 UDP-glucosyl transfer 100.0 2.3E-59 5E-64 459.7 38.0 365 6-395 81-467 (470)
4 PLN02863 UDP-glucoronosyl/UDP- 100.0 4E-59 8.7E-64 462.8 38.1 375 6-398 88-473 (477)
5 PLN03007 UDP-glucosyltransfera 100.0 5.8E-59 1.3E-63 464.9 38.9 381 8-397 100-481 (482)
6 PLN00164 glucosyltransferase; 100.0 2.6E-58 5.7E-63 458.3 39.2 365 13-397 91-474 (480)
7 PLN02410 UDP-glucoronosyl/UDP- 100.0 4.2E-58 9.1E-63 452.5 38.2 357 11-396 79-450 (451)
8 PLN02207 UDP-glycosyltransfera 100.0 5.4E-58 1.2E-62 451.6 37.3 371 7-396 83-465 (468)
9 PLN02208 glycosyltransferase f 100.0 4.8E-58 1E-62 451.0 36.4 350 9-396 86-439 (442)
10 PLN02764 glycosyltransferase f 100.0 7.3E-58 1.6E-62 447.8 37.3 353 7-397 85-446 (453)
11 PLN02555 limonoid glucosyltran 100.0 1.3E-57 2.9E-62 450.7 37.7 370 9-396 89-469 (480)
12 PLN03004 UDP-glycosyltransfera 100.0 6.1E-58 1.3E-62 449.8 33.8 352 9-385 87-450 (451)
13 PLN02173 UDP-glucosyl transfer 100.0 5.8E-57 1.3E-61 442.7 37.9 359 8-396 76-448 (449)
14 PLN02210 UDP-glucosyl transfer 100.0 1.2E-56 2.5E-61 443.8 38.4 363 10-396 82-455 (456)
15 PLN02554 UDP-glycosyltransfera 100.0 3.4E-56 7.3E-61 444.6 35.9 371 10-396 82-478 (481)
16 PLN02670 transferase, transfer 100.0 5.8E-56 1.2E-60 437.7 37.0 365 10-396 90-465 (472)
17 PLN02152 indole-3-acetate beta 100.0 4.5E-56 9.8E-61 437.0 35.9 358 8-394 79-454 (455)
18 PLN00414 glycosyltransferase f 100.0 6E-56 1.3E-60 436.7 36.4 351 9-397 86-441 (446)
19 PLN02167 UDP-glycosyltransfera 100.0 6.8E-56 1.5E-60 441.7 36.9 369 10-396 88-472 (475)
20 PLN02562 UDP-glycosyltransfera 100.0 2.4E-55 5.1E-60 434.0 37.1 353 8-394 76-447 (448)
21 PLN02448 UDP-glycosyltransfera 100.0 7.9E-54 1.7E-58 425.9 38.0 362 10-396 85-457 (459)
22 PHA03392 egt ecdysteroid UDP-g 100.0 3.8E-44 8.3E-49 359.0 28.6 315 19-397 123-467 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 3.7E-46 8E-51 377.6 5.0 290 23-376 112-426 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 3.1E-35 6.8E-40 297.5 24.5 203 135-374 227-437 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 1E-32 2.2E-37 271.0 26.4 300 16-394 78-389 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 2.9E-30 6.2E-35 254.4 18.9 159 181-375 228-387 (401)
27 COG1819 Glycosyl transferases, 100.0 4.6E-29 1E-33 243.9 17.1 165 192-395 235-399 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.8 5E-17 1.1E-21 155.1 20.4 230 17-352 81-317 (318)
29 PRK12446 undecaprenyldiphospho 99.7 6E-16 1.3E-20 149.4 20.1 137 191-356 182-326 (352)
30 COG0707 MurG UDP-N-acetylgluco 99.6 1.1E-14 2.3E-19 139.6 19.2 150 193-369 182-338 (357)
31 TIGR00661 MJ1255 conserved hyp 99.6 2.7E-14 5.9E-19 136.5 20.3 123 194-356 188-315 (321)
32 PF04101 Glyco_tran_28_C: Glyc 99.5 1.5E-15 3.2E-20 131.2 -2.1 135 196-356 1-145 (167)
33 PRK00726 murG undecaprenyldiph 99.5 5.3E-12 1.2E-16 122.5 20.8 145 193-366 182-335 (357)
34 cd03785 GT1_MurG MurG is an N- 99.4 1.1E-11 2.5E-16 119.6 21.2 149 193-367 180-336 (350)
35 PRK13608 diacylglycerol glucos 99.4 3.7E-11 8E-16 118.1 18.4 148 193-370 201-353 (391)
36 PRK13609 diacylglycerol glucos 99.3 5.3E-10 1.2E-14 109.4 23.8 146 193-368 201-351 (380)
37 TIGR00215 lpxB lipid-A-disacch 99.3 3E-10 6.6E-15 111.2 19.8 173 192-392 189-384 (385)
38 PLN02605 monogalactosyldiacylg 99.3 1.8E-09 4E-14 105.8 25.0 136 192-355 204-347 (382)
39 TIGR03492 conserved hypothetic 99.2 4.5E-09 9.7E-14 103.2 24.1 134 194-356 205-365 (396)
40 TIGR01133 murG undecaprenyldip 99.2 2.6E-09 5.6E-14 103.0 20.4 87 264-366 243-332 (348)
41 PRK00025 lpxB lipid-A-disaccha 99.1 3.9E-09 8.5E-14 103.2 19.1 106 266-393 256-374 (380)
42 TIGR03590 PseG pseudaminic aci 99.0 5.4E-09 1.2E-13 97.8 14.4 104 195-311 171-278 (279)
43 COG4671 Predicted glycosyl tra 98.8 6E-07 1.3E-11 83.4 19.2 133 195-354 220-364 (400)
44 cd03814 GT1_like_2 This family 98.8 7.6E-06 1.7E-10 78.4 27.0 141 196-370 198-347 (364)
45 PLN02871 UDP-sulfoquinovose:DA 98.6 2E-05 4.3E-10 79.4 25.7 141 196-370 264-415 (465)
46 PRK14089 ipid-A-disaccharide s 98.6 1.5E-05 3.3E-10 76.5 22.3 155 195-373 168-332 (347)
47 PRK05749 3-deoxy-D-manno-octul 98.6 3E-05 6.4E-10 77.1 25.0 85 267-371 315-404 (425)
48 TIGR00236 wecB UDP-N-acetylglu 98.5 9.6E-06 2.1E-10 78.9 19.4 129 195-356 198-335 (365)
49 cd03823 GT1_ExpE7_like This fa 98.5 9.5E-05 2.1E-09 70.5 24.2 145 195-368 191-342 (359)
50 cd03800 GT1_Sucrose_synthase T 98.4 0.00018 4E-09 70.2 26.3 94 254-369 282-382 (398)
51 cd05844 GT1_like_7 Glycosyltra 98.4 8E-05 1.7E-09 72.0 23.2 94 254-369 244-350 (367)
52 cd03798 GT1_wlbH_like This fam 98.4 0.00061 1.3E-08 64.8 28.4 135 195-357 202-346 (377)
53 cd03817 GT1_UGDG_like This fam 98.4 0.00025 5.4E-09 67.8 25.8 145 196-373 203-361 (374)
54 cd03794 GT1_wbuB_like This fam 98.4 0.00016 3.4E-09 69.5 24.4 148 194-371 219-381 (394)
55 cd03801 GT1_YqgM_like This fam 98.4 0.00033 7.3E-09 66.4 26.4 93 253-367 254-353 (374)
56 cd03786 GT1_UDP-GlcNAc_2-Epime 98.3 4.9E-05 1.1E-09 73.7 17.7 131 194-356 198-338 (363)
57 cd03820 GT1_amsD_like This fam 98.3 0.00034 7.3E-09 66.0 22.6 148 196-372 179-336 (348)
58 cd03822 GT1_ecORF704_like This 98.2 0.00074 1.6E-08 64.7 23.6 96 254-370 246-349 (366)
59 PF02350 Epimerase_2: UDP-N-ac 98.2 2.9E-05 6.4E-10 74.9 13.5 256 9-355 46-318 (346)
60 cd03799 GT1_amsK_like This is 98.2 0.00037 8.1E-09 66.7 21.1 148 195-369 179-341 (355)
61 KOG3349 Predicted glycosyltran 98.2 1.2E-05 2.5E-10 65.8 8.6 113 196-318 5-128 (170)
62 TIGR03087 stp1 sugar transfera 98.1 0.00094 2E-08 65.7 23.4 95 253-369 278-376 (397)
63 COG1519 KdtA 3-deoxy-D-manno-o 98.1 0.00098 2.1E-08 64.2 22.1 81 277-376 327-407 (419)
64 cd04962 GT1_like_5 This family 98.1 0.0038 8.3E-08 60.3 27.1 145 196-369 198-350 (371)
65 cd03818 GT1_ExpC_like This fam 98.1 0.0015 3.3E-08 64.2 24.5 97 254-370 280-381 (396)
66 PRK01021 lpxB lipid-A-disaccha 98.1 0.00065 1.4E-08 68.9 21.6 192 150-373 379-589 (608)
67 cd04946 GT1_AmsK_like This fam 98.1 0.00012 2.6E-09 72.5 16.2 163 195-391 230-406 (407)
68 cd03808 GT1_cap1E_like This fa 98.1 0.0026 5.7E-08 60.2 24.9 148 194-369 187-343 (359)
69 cd03819 GT1_WavL_like This fam 98.0 0.0021 4.5E-08 61.6 23.3 152 195-372 185-348 (355)
70 TIGR03449 mycothiol_MshA UDP-N 98.0 0.0017 3.6E-08 64.0 22.2 95 254-370 282-383 (405)
71 PF13844 Glyco_transf_41: Glyc 98.0 7E-05 1.5E-09 74.0 12.0 150 193-364 283-439 (468)
72 cd03811 GT1_WabH_like This fam 98.0 0.0039 8.4E-08 58.7 23.5 143 195-364 189-341 (353)
73 cd03795 GT1_like_4 This family 98.0 0.00013 2.7E-09 70.1 13.0 145 196-372 192-349 (357)
74 cd04949 GT1_gtfA_like This fam 97.9 0.0016 3.4E-08 63.3 20.7 101 254-373 260-363 (372)
75 PRK15427 colanic acid biosynth 97.9 0.00069 1.5E-08 67.0 16.9 112 254-394 278-403 (406)
76 TIGR02472 sucr_P_syn_N sucrose 97.9 0.012 2.7E-07 58.7 25.7 95 254-368 316-419 (439)
77 PF00534 Glycos_transf_1: Glyc 97.9 0.00021 4.5E-09 61.4 11.4 148 194-368 14-171 (172)
78 cd03816 GT1_ALG1_like This fam 97.8 0.011 2.5E-07 58.5 24.1 92 255-370 294-399 (415)
79 TIGR02918 accessory Sec system 97.8 0.01 2.2E-07 60.3 23.9 105 254-373 375-484 (500)
80 PF02684 LpxB: Lipid-A-disacch 97.8 0.0043 9.3E-08 60.2 20.2 203 150-385 151-366 (373)
81 cd03804 GT1_wbaZ_like This fam 97.8 0.0002 4.4E-09 69.0 11.2 136 198-366 198-338 (351)
82 PRK10307 putative glycosyl tra 97.8 0.0016 3.4E-08 64.5 17.6 144 196-371 230-389 (412)
83 PRK15179 Vi polysaccharide bio 97.8 0.016 3.5E-07 60.8 25.5 96 254-369 573-673 (694)
84 cd03813 GT1_like_3 This family 97.7 0.025 5.4E-07 57.2 25.6 93 254-368 353-455 (475)
85 TIGR03568 NeuC_NnaA UDP-N-acet 97.7 0.0045 9.7E-08 60.3 19.5 131 194-354 201-338 (365)
86 cd03805 GT1_ALG2_like This fam 97.7 0.019 4.1E-07 56.0 23.8 93 254-369 279-378 (392)
87 cd03821 GT1_Bme6_like This fam 97.7 0.0014 3E-08 62.6 15.4 94 254-369 261-359 (375)
88 TIGR02468 sucrsPsyn_pln sucros 97.7 0.023 4.9E-07 61.7 25.2 98 254-371 547-653 (1050)
89 cd03809 GT1_mtfB_like This fam 97.7 0.0049 1.1E-07 58.9 18.7 93 254-368 252-349 (365)
90 cd03807 GT1_WbnK_like This fam 97.6 0.0034 7.3E-08 59.7 17.2 89 255-367 251-344 (365)
91 COG0763 LpxB Lipid A disacchar 97.6 0.0061 1.3E-07 58.3 18.1 214 137-393 145-378 (381)
92 PRK09922 UDP-D-galactose:(gluc 97.6 0.0027 5.9E-08 61.6 16.2 148 196-371 181-342 (359)
93 cd03796 GT1_PIG-A_like This fa 97.6 0.064 1.4E-06 52.8 25.9 131 195-356 193-334 (398)
94 COG3980 spsG Spore coat polysa 97.5 0.0012 2.5E-08 60.2 11.5 133 196-356 160-294 (318)
95 cd03825 GT1_wcfI_like This fam 97.5 0.0055 1.2E-07 58.8 17.1 94 254-369 243-344 (365)
96 COG5017 Uncharacterized conser 97.5 0.0026 5.6E-08 51.4 11.0 107 197-323 2-122 (161)
97 PF13692 Glyco_trans_1_4: Glyc 97.4 0.00063 1.4E-08 55.8 7.4 127 196-355 3-135 (135)
98 PLN02949 transferase, transfer 97.4 0.077 1.7E-06 53.4 23.3 96 254-371 334-439 (463)
99 PRK15484 lipopolysaccharide 1, 97.4 0.013 2.9E-07 57.3 17.6 82 254-356 256-345 (380)
100 TIGR03088 stp2 sugar transfera 97.3 0.006 1.3E-07 59.3 14.7 92 255-368 255-351 (374)
101 cd03792 GT1_Trehalose_phosphor 97.3 0.1 2.2E-06 50.7 23.3 92 254-369 251-351 (372)
102 cd03806 GT1_ALG11_like This fa 97.3 0.13 2.9E-06 51.0 23.8 79 254-356 304-393 (419)
103 PF04007 DUF354: Protein of un 97.2 0.11 2.4E-06 49.7 21.0 126 193-353 178-308 (335)
104 cd04951 GT1_WbdM_like This fam 97.2 0.012 2.6E-07 56.4 14.7 78 254-355 244-326 (360)
105 TIGR02149 glgA_Coryne glycogen 97.1 0.02 4.3E-07 55.8 16.3 149 196-368 202-365 (388)
106 cd03812 GT1_CapH_like This fam 97.1 0.012 2.7E-07 56.3 13.7 140 196-362 193-338 (358)
107 COG0381 WecB UDP-N-acetylgluco 97.0 0.13 2.7E-06 49.6 19.7 154 195-390 205-368 (383)
108 TIGR02470 sucr_synth sucrose s 97.0 0.48 1E-05 50.4 25.4 94 255-368 619-726 (784)
109 PLN00142 sucrose synthase 96.8 0.56 1.2E-05 50.0 24.2 73 276-368 669-749 (815)
110 KOG4626 O-linked N-acetylgluco 96.8 0.016 3.4E-07 58.3 12.0 122 193-324 757-889 (966)
111 cd04955 GT1_like_6 This family 96.7 0.034 7.4E-07 53.3 13.9 136 198-367 196-342 (363)
112 COG3914 Spy Predicted O-linked 96.7 0.04 8.7E-07 55.1 13.6 105 192-306 427-542 (620)
113 PLN02501 digalactosyldiacylgly 96.6 0.44 9.5E-06 49.7 20.8 77 256-357 602-683 (794)
114 PRK09814 beta-1,6-galactofuran 96.4 0.027 5.8E-07 54.1 10.7 110 254-392 206-331 (333)
115 PLN02846 digalactosyldiacylgly 96.2 1.4 3.1E-05 44.1 21.9 74 258-356 287-364 (462)
116 PRK15490 Vi polysaccharide bio 95.9 0.32 6.9E-06 49.6 15.6 65 254-325 454-523 (578)
117 cd03802 GT1_AviGT4_like This f 95.8 0.24 5.1E-06 46.8 13.8 128 197-354 173-307 (335)
118 TIGR02095 glgA glycogen/starch 95.6 0.32 6.8E-06 49.1 14.5 129 196-354 292-436 (473)
119 cd03791 GT1_Glycogen_synthase_ 95.6 0.23 5E-06 50.0 13.6 132 196-354 297-441 (476)
120 PRK10017 colanic acid biosynth 95.5 0.64 1.4E-05 46.2 15.8 178 185-395 225-423 (426)
121 cd04950 GT1_like_1 Glycosyltra 95.4 0.73 1.6E-05 44.9 15.7 79 254-356 253-341 (373)
122 PRK14098 glycogen synthase; Pr 95.3 0.47 1E-05 48.2 14.4 130 196-353 308-449 (489)
123 PHA01633 putative glycosyl tra 94.5 1.7 3.6E-05 41.7 15.0 85 254-355 200-307 (335)
124 PRK00654 glgA glycogen synthas 94.0 1.7 3.8E-05 43.7 14.8 133 196-354 283-427 (466)
125 PLN02275 transferase, transfer 93.9 1.3 2.8E-05 43.1 13.5 76 254-353 285-371 (371)
126 PF13524 Glyco_trans_1_2: Glyc 93.8 0.52 1.1E-05 35.6 8.4 83 280-391 9-91 (92)
127 TIGR03713 acc_sec_asp1 accesso 93.8 0.52 1.1E-05 48.1 10.6 93 255-374 409-507 (519)
128 TIGR02193 heptsyl_trn_I lipopo 92.3 1.3 2.8E-05 42.0 10.5 143 186-353 171-319 (319)
129 TIGR02919 accessory Sec system 92.0 4 8.8E-05 40.7 13.8 116 209-356 291-412 (438)
130 TIGR02400 trehalose_OtsA alpha 91.5 1.7 3.6E-05 43.8 10.5 103 261-395 342-455 (456)
131 PHA01630 putative group 1 glyc 90.4 2.9 6.3E-05 40.1 10.7 40 262-301 197-241 (331)
132 PF06722 DUF1205: Protein of u 90.2 0.28 6.1E-06 37.9 2.9 54 181-234 27-85 (97)
133 PLN02316 synthase/transferase 90.0 17 0.00036 40.3 16.9 109 255-387 900-1024(1036)
134 PLN02939 transferase, transfer 89.6 9.1 0.0002 41.7 14.3 84 254-354 836-930 (977)
135 cd01635 Glycosyltransferase_GT 89.2 3 6.6E-05 36.3 9.3 49 254-304 160-216 (229)
136 PRK14099 glycogen synthase; Pr 88.5 4.8 0.0001 40.8 11.2 95 255-366 350-458 (485)
137 PRK10125 putative glycosyl tra 88.3 5.4 0.00012 39.4 11.1 100 211-349 257-365 (405)
138 cd03788 GT1_TPS Trehalose-6-Ph 86.4 3.2 6.9E-05 41.8 8.4 104 259-394 345-459 (460)
139 PRK06718 precorrin-2 dehydroge 81.3 12 0.00026 33.1 8.9 152 187-376 5-165 (202)
140 cd03789 GT1_LPS_heptosyltransf 79.6 8.7 0.00019 35.6 7.9 96 194-299 121-223 (279)
141 COG4370 Uncharacterized protei 79.0 7.4 0.00016 36.4 6.8 80 261-358 301-382 (412)
142 TIGR01470 cysG_Nterm siroheme 78.6 27 0.00058 30.9 10.3 149 194-376 10-165 (205)
143 TIGR02201 heptsyl_trn_III lipo 75.9 15 0.00032 35.3 8.6 99 193-299 180-285 (344)
144 cd03793 GT1_Glycogen_synthase_ 74.4 12 0.00026 38.5 7.7 80 265-354 468-551 (590)
145 PF01075 Glyco_transf_9: Glyco 74.1 11 0.00023 34.1 6.7 99 193-299 104-208 (247)
146 PLN03063 alpha,alpha-trehalose 73.5 16 0.00035 39.5 8.8 98 267-395 371-476 (797)
147 PF05159 Capsule_synth: Capsul 71.7 17 0.00036 33.6 7.5 81 211-300 141-225 (269)
148 PLN02470 acetolactate synthase 71.0 13 0.00029 38.6 7.4 92 200-300 2-109 (585)
149 cd07039 TPP_PYR_POX Pyrimidine 70.7 65 0.0014 27.3 10.7 28 273-300 63-96 (164)
150 cd07038 TPP_PYR_PDC_IPDC_like 70.4 44 0.00095 28.2 9.2 29 273-301 59-93 (162)
151 PRK14501 putative bifunctional 69.9 61 0.0013 34.7 12.2 109 259-395 346-461 (726)
152 PRK10422 lipopolysaccharide co 69.5 31 0.00067 33.2 9.1 98 194-299 183-287 (352)
153 PRK10964 ADP-heptose:LPS hepto 67.9 14 0.0003 35.0 6.3 94 195-299 179-278 (322)
154 PF06258 Mito_fiss_Elm1: Mitoc 67.5 1.1E+02 0.0025 28.9 17.2 58 264-324 221-282 (311)
155 PF03033 Glyco_transf_28: Glyc 67.2 6.3 0.00014 32.0 3.3 33 31-63 99-131 (139)
156 PF04464 Glyphos_transf: CDP-G 65.2 9.2 0.0002 37.1 4.5 116 254-390 251-367 (369)
157 cd07035 TPP_PYR_POX_like Pyrim 64.4 71 0.0015 26.4 9.3 29 273-301 59-93 (155)
158 cd07037 TPP_PYR_MenD Pyrimidin 62.7 35 0.00077 28.9 7.1 28 273-300 60-93 (162)
159 KOG1387 Glycosyltransferase [C 62.6 1.5E+02 0.0033 28.6 21.7 309 7-395 128-460 (465)
160 PF06925 MGDG_synth: Monogalac 61.6 24 0.00052 29.9 6.0 44 16-61 75-124 (169)
161 COG0438 RfaG Glycosyltransfera 61.2 1.3E+02 0.0028 27.3 16.9 81 254-356 256-343 (381)
162 PRK10916 ADP-heptose:LPS hepto 60.6 38 0.00083 32.4 7.9 97 193-299 179-286 (348)
163 TIGR02195 heptsyl_trn_II lipop 60.5 62 0.0013 30.7 9.3 96 193-299 173-276 (334)
164 TIGR00725 conserved hypothetic 57.9 39 0.00084 28.6 6.5 100 181-301 20-123 (159)
165 PRK06276 acetolactate synthase 55.0 70 0.0015 33.3 9.2 28 273-300 63-96 (586)
166 PF07429 Glyco_transf_56: 4-al 54.9 2.1E+02 0.0045 27.7 12.2 82 255-354 245-332 (360)
167 KOG2941 Beta-1,4-mannosyltrans 53.9 2.2E+02 0.0047 27.6 12.0 146 193-370 253-424 (444)
168 COG0859 RfaF ADP-heptose:LPS h 52.8 46 0.001 31.8 7.0 94 194-299 175-276 (334)
169 COG0801 FolK 7,8-dihydro-6-hyd 52.1 30 0.00066 29.3 4.8 35 196-230 3-37 (160)
170 PRK08322 acetolactate synthase 51.0 83 0.0018 32.3 8.9 28 273-300 63-96 (547)
171 COG4394 Uncharacterized protei 50.8 2.2E+02 0.0047 26.8 11.1 54 256-312 239-295 (370)
172 COG3660 Predicted nucleoside-d 50.5 1.7E+02 0.0036 27.2 9.4 96 196-299 164-271 (329)
173 COG2159 Predicted metal-depend 49.6 84 0.0018 29.5 7.9 93 182-289 116-210 (293)
174 PF06506 PrpR_N: Propionate ca 49.4 32 0.0007 29.5 4.8 33 270-303 31-63 (176)
175 PRK08155 acetolactate synthase 49.1 65 0.0014 33.3 7.8 80 211-300 15-109 (564)
176 TIGR02398 gluc_glyc_Psyn gluco 47.9 3.2E+02 0.0069 27.8 14.2 109 257-397 364-483 (487)
177 TIGR00173 menD 2-succinyl-5-en 47.3 1.6E+02 0.0034 29.4 9.9 27 273-299 63-95 (432)
178 PRK07525 sulfoacetaldehyde ace 46.9 1.2E+02 0.0026 31.5 9.4 28 273-300 68-101 (588)
179 cd01840 SGNH_hydrolase_yrhL_li 46.5 54 0.0012 27.0 5.6 39 193-232 50-88 (150)
180 cd03412 CbiK_N Anaerobic cobal 46.3 35 0.00077 27.6 4.3 37 195-231 2-40 (127)
181 PRK12446 undecaprenyldiphospho 45.9 23 0.00049 34.3 3.6 98 196-299 4-120 (352)
182 COG2099 CobK Precorrin-6x redu 45.7 37 0.00081 31.0 4.6 38 19-59 55-99 (257)
183 PRK10637 cysG siroheme synthas 44.7 1.1E+02 0.0024 30.8 8.4 35 341-377 135-169 (457)
184 PRK07710 acetolactate synthase 43.1 1.1E+02 0.0024 31.6 8.5 28 273-300 78-111 (571)
185 PF10093 DUF2331: Uncharacteri 42.8 3E+02 0.0065 26.9 10.5 97 208-310 193-297 (374)
186 PF06825 HSBP1: Heat shock fac 42.7 34 0.00073 23.2 3.0 49 343-397 2-50 (54)
187 PRK08057 cobalt-precorrin-6x r 42.6 46 0.00099 30.5 4.9 38 19-59 54-98 (248)
188 KOG0853 Glycosyltransferase [C 42.1 18 0.00038 36.5 2.2 66 284-367 380-445 (495)
189 PF02776 TPP_enzyme_N: Thiamin 41.5 56 0.0012 27.8 5.1 29 273-301 64-98 (172)
190 PRK06456 acetolactate synthase 41.0 1.4E+02 0.003 31.0 8.7 28 273-300 68-101 (572)
191 PF12000 Glyco_trans_4_3: Gkyc 40.9 1.1E+02 0.0024 26.2 6.7 43 17-60 52-95 (171)
192 PF06180 CbiK: Cobalt chelatas 40.8 33 0.00073 31.6 3.7 39 195-233 2-43 (262)
193 cd07025 Peptidase_S66 LD-Carbo 40.8 58 0.0013 30.4 5.4 75 207-303 46-122 (282)
194 PRK04940 hypothetical protein; 40.7 62 0.0013 28.0 5.1 31 32-62 60-91 (180)
195 PRK07449 2-succinyl-5-enolpyru 40.4 93 0.002 32.2 7.4 82 210-300 10-105 (568)
196 PRK03359 putative electron tra 40.1 58 0.0013 30.0 5.1 42 19-62 101-148 (256)
197 PF02571 CbiJ: Precorrin-6x re 39.9 49 0.0011 30.3 4.6 39 18-59 54-99 (249)
198 PF07355 GRDB: Glycine/sarcosi 39.4 62 0.0014 31.0 5.3 44 14-59 64-117 (349)
199 KOG4117 Heat shock factor bind 39.0 1.3E+02 0.0029 21.0 6.0 51 341-397 13-63 (73)
200 COG0052 RpsB Ribosomal protein 37.9 37 0.0008 30.9 3.4 32 31-62 155-188 (252)
201 COG1422 Predicted membrane pro 37.0 73 0.0016 28.0 4.9 71 285-379 24-94 (201)
202 PRK08527 acetolactate synthase 36.6 1E+02 0.0022 31.8 7.0 28 273-300 66-99 (563)
203 PRK08199 thiamine pyrophosphat 36.3 2.5E+02 0.0054 29.0 9.7 28 273-300 71-104 (557)
204 TIGR01917 gly_red_sel_B glycin 35.8 1.1E+02 0.0023 30.3 6.4 50 15-66 321-377 (431)
205 PRK08673 3-deoxy-7-phosphohept 35.5 4E+02 0.0087 25.6 10.2 112 214-352 191-325 (335)
206 PRK11269 glyoxylate carboligas 35.3 2.1E+02 0.0045 29.9 9.0 28 273-300 68-101 (591)
207 cd01981 Pchlide_reductase_B Pc 35.3 59 0.0013 32.3 4.8 36 20-60 360-395 (430)
208 TIGR01918 various_sel_PB selen 35.2 1E+02 0.0022 30.5 6.1 50 15-66 321-377 (431)
209 PF04493 Endonuclease_5: Endon 34.9 61 0.0013 28.8 4.3 41 19-59 76-123 (206)
210 PRK14092 2-amino-4-hydroxy-6-h 34.9 91 0.002 26.5 5.2 30 194-223 7-36 (163)
211 PRK05858 hypothetical protein; 34.4 2.4E+02 0.0052 29.0 9.2 27 274-300 68-100 (542)
212 PRK12342 hypothetical protein; 33.9 79 0.0017 29.0 5.0 42 19-62 98-145 (254)
213 CHL00076 chlB photochlorophyll 33.4 68 0.0015 32.8 4.9 37 19-60 363-399 (513)
214 PRK02797 4-alpha-L-fucosyltran 33.2 4.4E+02 0.0094 25.1 12.4 79 255-351 206-290 (322)
215 cd01141 TroA_d Periplasmic bin 33.2 55 0.0012 28.0 3.7 40 18-60 58-99 (186)
216 PF05728 UPF0227: Uncharacteri 33.1 78 0.0017 27.5 4.6 44 20-63 47-91 (187)
217 COG1578 Uncharacterized conser 33.0 1.9E+02 0.004 26.8 7.0 38 342-379 54-91 (285)
218 cd06559 Endonuclease_V Endonuc 33.0 50 0.0011 29.4 3.4 40 20-59 81-127 (208)
219 PRK09219 xanthine phosphoribos 32.7 97 0.0021 27.0 5.1 40 18-59 38-79 (189)
220 cd03466 Nitrogenase_NifN_2 Nit 32.2 77 0.0017 31.6 5.0 36 19-59 361-396 (429)
221 KOG0081 GTPase Rab27, small G 32.1 38 0.00083 28.6 2.3 43 20-62 107-164 (219)
222 TIGR01278 DPOR_BchB light-inde 32.0 71 0.0015 32.6 4.8 35 20-59 354-388 (511)
223 PRK13010 purU formyltetrahydro 31.9 4.4E+02 0.0094 24.7 9.7 103 214-354 160-264 (289)
224 TIGR01917 gly_red_sel_B glycin 31.4 98 0.0021 30.6 5.3 43 15-59 61-113 (431)
225 TIGR01918 various_sel_PB selen 31.4 99 0.0022 30.5 5.4 43 15-59 61-113 (431)
226 TIGR03609 S_layer_CsaB polysac 31.3 3.8E+02 0.0083 24.8 9.4 99 194-301 172-277 (298)
227 TIGR00661 MJ1255 conserved hyp 31.1 2.2E+02 0.0047 26.8 7.8 33 267-299 87-119 (321)
228 KOG1344 Predicted histone deac 30.8 1.5E+02 0.0033 26.7 5.9 46 15-62 233-300 (324)
229 PF05225 HTH_psq: helix-turn-h 30.7 77 0.0017 20.4 3.2 26 341-369 1-26 (45)
230 cd01965 Nitrogenase_MoFe_beta_ 30.6 80 0.0017 31.4 4.9 36 19-59 360-395 (428)
231 PRK06270 homoserine dehydrogen 30.5 3.9E+02 0.0084 25.6 9.4 58 264-322 80-149 (341)
232 TIGR02418 acolac_catab acetola 30.4 1.3E+02 0.0029 30.8 6.6 28 273-300 61-94 (539)
233 PRK02910 light-independent pro 30.4 82 0.0018 32.3 5.0 35 20-59 352-386 (519)
234 PRK07979 acetolactate synthase 30.3 1.5E+02 0.0032 30.8 6.9 28 273-300 67-100 (574)
235 cd01018 ZntC Metal binding pro 30.1 1.6E+02 0.0036 27.0 6.6 43 19-63 206-250 (266)
236 PF13326 PSII_Pbs27: Photosyst 30.1 1.7E+02 0.0037 24.3 5.9 57 341-397 52-116 (145)
237 PF13499 EF-hand_7: EF-hand do 30.1 91 0.002 21.3 3.8 53 335-392 12-64 (66)
238 TIGR01286 nifK nitrogenase mol 29.9 87 0.0019 32.1 5.0 37 18-59 425-461 (515)
239 cd07062 Peptidase_S66_mccF_lik 29.7 98 0.0021 29.3 5.1 75 207-303 50-126 (308)
240 PRK08978 acetolactate synthase 29.6 1.5E+02 0.0032 30.6 6.7 28 273-300 63-96 (548)
241 PRK09107 acetolactate synthase 29.1 1.8E+02 0.004 30.3 7.4 28 273-300 74-107 (595)
242 cd01976 Nitrogenase_MoFe_alpha 29.0 69 0.0015 31.8 4.1 36 19-59 358-393 (421)
243 TIGR01285 nifN nitrogenase mol 28.8 80 0.0017 31.5 4.5 35 20-59 363-397 (432)
244 PRK08979 acetolactate synthase 28.8 1.6E+02 0.0034 30.5 6.9 28 273-300 67-100 (572)
245 PRK06725 acetolactate synthase 28.7 1.5E+02 0.0032 30.8 6.6 28 273-300 77-110 (570)
246 PRK06457 pyruvate dehydrogenas 28.5 1.6E+02 0.0036 30.2 6.9 28 273-300 64-97 (549)
247 PRK06882 acetolactate synthase 28.3 1.6E+02 0.0035 30.5 6.8 28 273-300 67-100 (574)
248 PF13477 Glyco_trans_4_2: Glyc 28.1 1.3E+02 0.0027 24.0 4.9 37 21-59 65-105 (139)
249 TIGR00118 acolac_lg acetolacta 27.8 1.8E+02 0.0039 30.0 7.0 28 273-300 64-97 (558)
250 PF01081 Aldolase: KDPG and KH 27.8 3.8E+02 0.0083 23.5 8.0 59 126-207 121-181 (196)
251 PRK13011 formyltetrahydrofolat 27.7 5.1E+02 0.011 24.2 10.0 102 214-353 156-259 (286)
252 cd03409 Chelatase_Class_II Cla 27.3 2.6E+02 0.0057 20.8 7.0 37 196-232 2-41 (101)
253 COG0503 Apt Adenine/guanine ph 27.2 1.5E+02 0.0032 25.6 5.3 37 21-59 44-82 (179)
254 TIGR03457 sulphoacet_xsc sulfo 27.0 1.8E+02 0.0039 30.2 6.9 28 273-300 64-97 (579)
255 PRK10353 3-methyl-adenine DNA 26.4 3.1E+02 0.0067 23.9 7.0 25 298-322 22-46 (187)
256 PRK06466 acetolactate synthase 26.3 1.9E+02 0.004 30.0 6.8 28 273-300 67-100 (574)
257 PRK00039 ruvC Holliday junctio 26.1 1.8E+02 0.0039 24.7 5.6 49 12-62 43-106 (164)
258 PRK07282 acetolactate synthase 26.1 2E+02 0.0044 29.7 7.1 28 273-300 73-106 (566)
259 cd01974 Nitrogenase_MoFe_beta 25.8 1.2E+02 0.0026 30.2 5.1 36 19-59 366-401 (435)
260 TIGR00347 bioD dethiobiotin sy 25.8 1.4E+02 0.0031 24.8 5.0 42 21-62 88-138 (166)
261 COG1737 RpiR Transcriptional r 25.3 2E+02 0.0043 26.8 6.2 90 184-306 123-217 (281)
262 PF05693 Glycogen_syn: Glycoge 24.8 94 0.002 32.3 4.1 100 264-373 462-566 (633)
263 PF09547 Spore_IV_A: Stage IV 24.8 2.4E+02 0.0053 28.2 6.7 76 268-355 141-235 (492)
264 PRK02155 ppnK NAD(+)/NADH kina 24.7 2.1E+02 0.0045 26.9 6.2 26 275-300 65-94 (291)
265 PRK09259 putative oxalyl-CoA d 24.6 1.8E+02 0.0039 30.1 6.3 28 273-300 72-105 (569)
266 PRK07064 hypothetical protein; 24.3 2.4E+02 0.0052 28.9 7.2 28 273-300 66-99 (544)
267 TIGR02720 pyruv_oxi_spxB pyruv 24.1 2E+02 0.0043 29.9 6.6 28 273-300 63-96 (575)
268 PRK06048 acetolactate synthase 24.0 2.6E+02 0.0056 28.9 7.3 28 273-300 70-103 (561)
269 PLN02293 adenine phosphoribosy 23.9 1.9E+02 0.0042 25.1 5.5 42 16-59 48-91 (187)
270 PRK13810 orotate phosphoribosy 23.7 1.8E+02 0.0038 25.3 5.2 39 19-59 62-102 (187)
271 TIGR01743 purR_Bsub pur operon 23.7 1.6E+02 0.0035 27.2 5.2 29 31-59 127-157 (268)
272 cd01980 Chlide_reductase_Y Chl 23.3 1.3E+02 0.0028 29.8 4.8 32 23-59 343-374 (416)
273 PF08030 NAD_binding_6: Ferric 23.2 55 0.0012 27.0 1.9 40 195-234 3-47 (156)
274 TIGR01744 XPRTase xanthine pho 23.2 1.8E+02 0.0039 25.4 5.1 40 18-59 38-79 (191)
275 TIGR03254 oxalate_oxc oxalyl-C 23.0 2.2E+02 0.0048 29.3 6.6 28 273-300 65-98 (554)
276 PRK12311 rpsB 30S ribosomal pr 22.8 96 0.0021 29.7 3.6 32 31-62 151-184 (326)
277 PF00731 AIRC: AIR carboxylase 22.8 4.6E+02 0.0099 22.0 11.5 86 196-306 2-91 (150)
278 PRK05562 precorrin-2 dehydroge 22.7 5.7E+02 0.012 23.0 9.6 153 184-375 17-179 (223)
279 PRK09213 pur operon repressor; 22.6 1.8E+02 0.0038 27.1 5.2 29 31-59 129-159 (271)
280 TIGR03837 efp_adjacent_2 conse 22.2 2E+02 0.0043 28.0 5.5 98 207-310 190-295 (371)
281 PRK06965 acetolactate synthase 22.1 2.7E+02 0.0059 28.9 7.1 28 273-300 84-117 (587)
282 PF06506 PrpR_N: Propionate ca 22.1 1.2E+02 0.0026 25.9 3.8 29 31-62 124-152 (176)
283 cd03784 GT1_Gtf_like This fami 22.1 4.7E+02 0.01 25.2 8.6 36 196-233 3-38 (401)
284 COG1448 TyrB Aspartate/tyrosin 22.1 7.6E+02 0.016 24.2 10.0 164 181-382 159-334 (396)
285 TIGR03845 sulfopyru_alph sulfo 21.9 2.3E+02 0.0049 23.8 5.4 25 276-300 62-91 (157)
286 PRK08266 hypothetical protein; 21.9 2.7E+02 0.0059 28.5 7.0 27 274-300 69-101 (542)
287 PRK07586 hypothetical protein; 21.8 6.9E+02 0.015 25.3 9.9 27 274-300 65-97 (514)
288 PRK08558 adenine phosphoribosy 21.8 1.7E+02 0.0038 26.5 4.9 28 31-58 110-139 (238)
289 PRK14478 nitrogenase molybdenu 21.7 1.1E+02 0.0025 30.8 4.1 35 19-58 382-416 (475)
290 cd05022 S-100A13 S-100A13: S-1 21.6 1.6E+02 0.0034 22.2 3.9 54 336-396 22-75 (89)
291 PRK08617 acetolactate synthase 21.3 2.4E+02 0.0052 29.0 6.5 28 273-300 67-100 (552)
292 COG0299 PurN Folate-dependent 21.2 2.7E+02 0.0059 24.5 5.7 74 208-302 63-137 (200)
293 PRK06027 purU formyltetrahydro 20.8 5.8E+02 0.012 23.8 8.3 66 270-354 193-260 (286)
294 PRK06546 pyruvate dehydrogenas 20.8 3.3E+02 0.0072 28.3 7.4 28 273-300 66-99 (578)
295 TIGR02015 BchY chlorophyllide 20.5 1.3E+02 0.0029 29.8 4.3 31 24-59 349-379 (422)
296 COG0299 PurN Folate-dependent 20.2 2E+02 0.0042 25.3 4.6 29 31-59 28-56 (200)
No 1
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=1.1e-62 Score=487.69 Aligned_cols=392 Identities=55% Similarity=1.050 Sum_probs=307.4
Q ss_pred hhHHHHHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCC
Q 037640 6 DLALDFFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSE 85 (398)
Q Consensus 6 ~~~~~l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
+....+..++..+.+.+.++|++...+++|||+|.+++|+..+|+++|||.+.|++++++....+++.....++.....+
T Consensus 93 ~~~~~~~~~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~ 172 (491)
T PLN02534 93 DLLRKFYDAVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSVSSD 172 (491)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcccccCCCC
Confidence 34456667778889999999986435789999999999999999999999999999999888776554433222222222
Q ss_pred CCccccCCCCccccccccccc-ccC-CcchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecCcccCC
Q 037640 86 SEYFSVPGLPDKIELTKKQVD-STQ-GQKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIGPVSLS 163 (398)
Q Consensus 86 ~~~~~~pg~~~~~~~~~~~l~-~~~-~~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~ 163 (398)
..+..+|+++....++..+++ ++. ......+...+.+....++++++|||++||+.++++++..++++++.|||++..
T Consensus 173 ~~~~~iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~ 252 (491)
T PLN02534 173 SEPFVVPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLC 252 (491)
T ss_pred CceeecCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECccccc
Confidence 234567888765556777787 442 223333443443333457789999999999999999987777789999999753
Q ss_pred CcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhcc
Q 037640 164 NKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWV 243 (398)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~ 243 (398)
.........++.....+++++.+|||++++++||||||||+..+..+++.+++.+|+..+++|||+++.........+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~ 332 (491)
T PLN02534 253 NKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWL 332 (491)
T ss_pred ccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhc
Confidence 21111100011111112457999999999899999999999999999999999999999999999998532111111222
Q ss_pred CchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEec
Q 037640 244 VEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIG 323 (398)
Q Consensus 244 l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~ 323 (398)
+|++|.+++++.|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|+++.
T Consensus 333 ~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~ 412 (491)
T PLN02534 333 VKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVG 412 (491)
T ss_pred CchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEec
Confidence 68999989888999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred cCCCCCccccccccccccHHHHHHHHHHHhcc-CcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 037640 324 VENPMTWGEEQNIGVLVKRDDVKNAVERLMDE-GNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMKH 397 (398)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~-~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 397 (398)
.+...+||...+.+..+++++|.++|+++|.+ +++++.+|+||++|++++++++.+||||.+++++||+++..+
T Consensus 413 ~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~~ 487 (491)
T PLN02534 413 VEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSILIQDVLKQ 487 (491)
T ss_pred ccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 55455565432212248999999999999973 567899999999999999999999999999999999999865
No 2
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=2.3e-59 Score=462.20 Aligned_cols=361 Identities=28% Similarity=0.491 Sum_probs=288.5
Q ss_pred HHHHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhh-ccccc-ccCCC
Q 037640 9 LDFFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFAS-KFLES-ISSES 86 (398)
Q Consensus 9 ~~l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~ 86 (398)
..+..++..+.+.++++|++.+.+++|||+|.+++|+..+|+++|||++.|++++++.+..+.+.+.. ..... ...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~ 160 (481)
T PLN02992 81 TKIGVIMREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQR 160 (481)
T ss_pred HHHHHHHHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccccCC
Confidence 34555667788999999987545789999999999999999999999999999999887766655321 11110 00111
Q ss_pred CccccCCCCccccccccccc-cc-CCc-chHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhh------cCCceeec
Q 037640 87 EYFSVPGLPDKIELTKKQVD-ST-QGQ-KFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKI------SRDKAWCI 157 (398)
Q Consensus 87 ~~~~~pg~~~~~~~~~~~l~-~~-~~~-~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~------~~~~v~~v 157 (398)
.+..+||++. ++..+++ .+ ... .....+.+......+++++++|||++||+.++++++.. ..++++.|
T Consensus 161 ~~~~iPg~~~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~V 237 (481)
T PLN02992 161 KPLAMPGCEP---VRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPI 237 (481)
T ss_pred CCcccCCCCc---cCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEe
Confidence 2345777765 5666777 33 221 12223333344556788999999999999999988642 13579999
Q ss_pred CcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCc-
Q 037640 158 GPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETS- 236 (398)
Q Consensus 158 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~- 236 (398)
||++..... ...++++.+|||++++++||||||||+..++.+++++++.+|+..+++|||++++....
T Consensus 238 GPl~~~~~~-----------~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~ 306 (481)
T PLN02992 238 GPLCRPIQS-----------SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGS 306 (481)
T ss_pred cCccCCcCC-----------CcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccc
Confidence 999753210 01246799999999888999999999999999999999999999999999999742110
Q ss_pred --------------hhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccc
Q 037640 237 --------------KELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLF 302 (398)
Q Consensus 237 --------------~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~ 302 (398)
....++ +|++|.+++++.|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~-lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~ 385 (481)
T PLN02992 307 ACSAYFSANGGETRDNTPEY-LPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLF 385 (481)
T ss_pred cccccccCcccccccchhhh-CCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCcc
Confidence 001123 89999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHh--cC
Q 037640 303 ADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQ--EG 380 (398)
Q Consensus 303 ~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~--~~ 380 (398)
+||+.||+++++++|+|+.++.. ++.++.++|.++|+++|.+ ++++.++++++++++.+++++. +|
T Consensus 386 ~DQ~~na~~~~~~~g~gv~~~~~-----------~~~~~~~~l~~av~~vm~~-~~g~~~r~~a~~~~~~a~~Av~~~~G 453 (481)
T PLN02992 386 AEQNMNAALLSDELGIAVRSDDP-----------KEVISRSKIEALVRKVMVE-EEGEEMRRKVKKLRDTAEMSLSIDGG 453 (481)
T ss_pred chhHHHHHHHHHHhCeeEEecCC-----------CCcccHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999996699999999752 1258999999999999986 4788999999999999999995 59
Q ss_pred CchHHHHHHHHHHHHc
Q 037640 381 GSSHLNITLLLQDIMK 396 (398)
Q Consensus 381 g~~~~~~~~~~~~~~~ 396 (398)
|||.+++++||+++..
T Consensus 454 GSS~~~l~~~v~~~~~ 469 (481)
T PLN02992 454 GVAHESLCRVTKECQR 469 (481)
T ss_pred CchHHHHHHHHHHHHH
Confidence 9999999999998764
No 3
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=2.3e-59 Score=459.72 Aligned_cols=365 Identities=27% Similarity=0.497 Sum_probs=292.3
Q ss_pred hhHHHHHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCC-eEEEechhHHHHHHHHHhhhhc-cccc-c
Q 037640 6 DLALDFFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVP-RIAFHGTCCFSVVCFNNIFASK-FLES-I 82 (398)
Q Consensus 6 ~~~~~l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP-~v~~~~~~~~~~~~~~~~~~~~-~~~~-~ 82 (398)
+....++.++..+.+.+.++|+++..+++|||+|.+++|+.++|+++||| .++|++++++....+++++... .... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~~ 160 (470)
T PLN03015 81 TIFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEY 160 (470)
T ss_pred cHHHHHHHHHHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhccccccc
Confidence 34456777888899999999997545789999999999999999999999 5888888888876666654311 1111 0
Q ss_pred cCCCCccccCCCCccccccccccc-ccCCc--c-hHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhc------CC
Q 037640 83 SSESEYFSVPGLPDKIELTKKQVD-STQGQ--K-FKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKIS------RD 152 (398)
Q Consensus 83 ~~~~~~~~~pg~~~~~~~~~~~l~-~~~~~--~-~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~------~~ 152 (398)
.....+..+||+|. ++..++| ++... . +..+.+ ......+++++++|||++||+.+++.++..+ .+
T Consensus 161 ~~~~~~~~vPg~p~---l~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~ 236 (470)
T PLN03015 161 VDIKEPLKIPGCKP---VGPKELMETMLDRSDQQYKECVR-SGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKV 236 (470)
T ss_pred CCCCCeeeCCCCCC---CChHHCCHhhcCCCcHHHHHHHH-HHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCC
Confidence 01112356788875 6777887 44221 1 233333 2334678899999999999999999887642 25
Q ss_pred ceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeC
Q 037640 153 KAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIRE 232 (398)
Q Consensus 153 ~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 232 (398)
+++.|||++..... ...++++.+|||++++++||||||||+..++.+++++++.+|+..+++|||+++.
T Consensus 237 ~v~~VGPl~~~~~~-----------~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~ 305 (470)
T PLN03015 237 PVYPIGPIVRTNVH-----------VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRR 305 (470)
T ss_pred ceEEecCCCCCccc-----------ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEec
Confidence 79999999742110 0123579999999988999999999999999999999999999999999999974
Q ss_pred CCC--------chhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccc
Q 037640 233 GET--------SKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFAD 304 (398)
Q Consensus 233 ~~~--------~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~D 304 (398)
... .....++ +|++|.+++++.++++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++|
T Consensus 306 ~~~~~~~~~~~~~~~~~~-lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~D 384 (470)
T PLN03015 306 PASYLGASSSDDDQVSAS-LPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAE 384 (470)
T ss_pred Cccccccccccccchhhc-CChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccc
Confidence 211 0011223 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhcc-CcchHHHHHHHHHHHHHHHHHHhcCCch
Q 037640 305 QFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDE-GNDGEERRNRALNLAKMAKMAIQEGGSS 383 (398)
Q Consensus 305 Q~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~-~~~~~~~~~~a~~l~~~~~~~~~~~g~~ 383 (398)
|+.||+++++.+|+|+.+.... ..+.+++++|+++|+++|.+ +++++.+|+||++|+++.++++++||||
T Consensus 385 Q~~na~~~~~~~gvg~~~~~~~---------~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS 455 (470)
T PLN03015 385 QWMNATLLTEEIGVAVRTSELP---------SEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSS 455 (470)
T ss_pred hHHHHHHHHHHhCeeEEecccc---------cCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 9999999978999999995210 01258999999999999963 3678999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 037640 384 HLNITLLLQDIM 395 (398)
Q Consensus 384 ~~~~~~~~~~~~ 395 (398)
.+++++|++.+.
T Consensus 456 ~~nl~~~~~~~~ 467 (470)
T PLN03015 456 YNSLFEWAKRCY 467 (470)
T ss_pred HHHHHHHHHhcc
Confidence 999999998763
No 4
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=4e-59 Score=462.80 Aligned_cols=375 Identities=33% Similarity=0.551 Sum_probs=293.7
Q ss_pred hhHHHHHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccc-cC
Q 037640 6 DLALDFFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESI-SS 84 (398)
Q Consensus 6 ~~~~~l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 84 (398)
+.+..++.++..+.+.+.++|++...+++|||+|.+++|+..+|+++|||++.|++++++.+..++++....+.... ..
T Consensus 88 ~~~~~~~~a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~ 167 (477)
T PLN02863 88 SGFPLMIHALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDD 167 (477)
T ss_pred hhHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccccccccc
Confidence 34456788888889999999987545689999999999999999999999999999999999998877543222110 11
Q ss_pred CCCc---cccCCCCccccccccccc-ccCCc----chHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcC-Ccee
Q 037640 85 ESEY---FSVPGLPDKIELTKKQVD-STQGQ----KFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISR-DKAW 155 (398)
Q Consensus 85 ~~~~---~~~pg~~~~~~~~~~~l~-~~~~~----~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~-~~v~ 155 (398)
+... ..+||++. ++..+++ ++... .....+.+.......++++++|||++||+.++++++..++ ++++
T Consensus 168 ~~~~~~~~~iPg~~~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~ 244 (477)
T PLN02863 168 QNEILSFSKIPNCPK---YPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVW 244 (477)
T ss_pred cccccccCCCCCCCC---cChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeE
Confidence 1111 24566654 6677777 44321 1122222222334567889999999999999999987765 6899
Q ss_pred ecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCC
Q 037640 156 CIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGET 235 (398)
Q Consensus 156 ~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 235 (398)
.|||++...........++......++++.+||+.+++++||||||||+..++.+++.+++.+|+..+++|||+++....
T Consensus 245 ~IGPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~ 324 (477)
T PLN02863 245 AVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVN 324 (477)
T ss_pred EeCCCcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcc
Confidence 99999753211000001111111125679999999988899999999999999999999999999999999999985321
Q ss_pred ch-hhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHH
Q 037640 236 SK-ELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVH 314 (398)
Q Consensus 236 ~~-~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~ 314 (398)
.. .... +|++|.+++++.|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++
T Consensus 325 ~~~~~~~--lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~ 402 (477)
T PLN02863 325 EESDYSN--IPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVD 402 (477)
T ss_pred cccchhh--CCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHH
Confidence 10 1112 88999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred HhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 037640 315 LLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDI 394 (398)
Q Consensus 315 ~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (398)
++|+|+++.... .+.++.+++.++|+++|. +++.||+||+++++.+++++.+||||.+++++||+++
T Consensus 403 ~~gvG~~~~~~~----------~~~~~~~~v~~~v~~~m~---~~~~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i 469 (477)
T PLN02863 403 ELKVAVRVCEGA----------DTVPDSDELARVFMESVS---ENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHV 469 (477)
T ss_pred hhceeEEeccCC----------CCCcCHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 899999995320 124689999999999994 2469999999999999999999999999999999999
Q ss_pred HcCC
Q 037640 395 MKHD 398 (398)
Q Consensus 395 ~~~~ 398 (398)
...+
T Consensus 470 ~~~~ 473 (477)
T PLN02863 470 VELG 473 (477)
T ss_pred HHhc
Confidence 7653
No 5
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=5.8e-59 Score=464.93 Aligned_cols=381 Identities=42% Similarity=0.798 Sum_probs=293.8
Q ss_pred HHHHHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCC
Q 037640 8 ALDFFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESE 87 (398)
Q Consensus 8 ~~~l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
...+..+...+.+.+.+++++ .++||||+|.+++|+..+|+++|||.++|++++++....++....+.+.........
T Consensus 100 ~~~~~~~~~~l~~~l~~~l~~--~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 177 (482)
T PLN03007 100 FLKFLFSTKYFKDQLEKLLET--TRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSE 177 (482)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccccCCCCc
Confidence 445556667888999999988 789999999999999999999999999999999888777665543322211111112
Q ss_pred ccccCCCCccccccccccc-ccCCcchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecCcccCCCcc
Q 037640 88 YFSVPGLPDKIELTKKQVD-STQGQKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIGPVSLSNKE 166 (398)
Q Consensus 88 ~~~~pg~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~ 166 (398)
+..+|++|..+.++..+++ .-....+..+.....+...+++++++||+++||+.+.+.+++....++++|||+......
T Consensus 178 ~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~ 257 (482)
T PLN03007 178 PFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRG 257 (482)
T ss_pred eeeCCCCCCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEccccccccc
Confidence 2347788754334444554 211112334444555566788899999999999998888877666789999998653221
Q ss_pred cchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCch
Q 037640 167 YSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVED 246 (398)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~ 246 (398)
......++......++++.+||+++++++||||||||+...+.+++.+++.+|+..+++|||+++..........+ +|+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~-lp~ 336 (482)
T PLN03007 258 FEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEW-LPE 336 (482)
T ss_pred cccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhc-CCH
Confidence 1000000111112357799999999889999999999999999999999999999999999999864221011112 899
Q ss_pred hHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCC
Q 037640 247 GFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVEN 326 (398)
Q Consensus 247 ~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 326 (398)
+|.+++.+.|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+++|+.+...+
T Consensus 337 ~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~ 416 (482)
T PLN03007 337 GFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKK 416 (482)
T ss_pred HHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999876678887764210
Q ss_pred CCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 037640 327 PMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMKH 397 (398)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 397 (398)
... -..+.+++++|+++|+++|.| +++++||+||+++++++++++.+||||.+++++||+++.+.
T Consensus 417 ~~~-----~~~~~~~~~~l~~av~~~m~~-~~~~~~r~~a~~~~~~a~~a~~~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 417 LVK-----VKGDFISREKVEKAVREVIVG-EEAEERRLRAKKLAEMAKAAVEEGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred ccc-----cccCcccHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 000 001258999999999999986 56889999999999999999999999999999999998764
No 6
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=2.6e-58 Score=458.26 Aligned_cols=365 Identities=29% Similarity=0.501 Sum_probs=290.0
Q ss_pred HHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhc-cccc-ccCCCCccc
Q 037640 13 TAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASK-FLES-ISSESEYFS 90 (398)
Q Consensus 13 ~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~ 90 (398)
..+..+.+.+.++|+++..+++|||+|.+++|+..+|+++|||.+.|++++++.+..+.+++... .... ......+..
T Consensus 91 ~~~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (480)
T PLN00164 91 RYIQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEEMEGAVD 170 (480)
T ss_pred HHHHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccCcccccCccee
Confidence 35567888999999874346799999999999999999999999999999999988887764321 0000 000012234
Q ss_pred cCCCCccccccccccc-ccCCc--chHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhc------CCceeecCccc
Q 037640 91 VPGLPDKIELTKKQVD-STQGQ--KFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKIS------RDKAWCIGPVS 161 (398)
Q Consensus 91 ~pg~~~~~~~~~~~l~-~~~~~--~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~------~~~v~~vGpl~ 161 (398)
+||++. ++..++| ++... .....+....+...+++++++|||++||+.++++++... .++++.|||++
T Consensus 171 iPGlp~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~ 247 (480)
T PLN00164 171 VPGLPP---VPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVI 247 (480)
T ss_pred cCCCCC---CChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCc
Confidence 788765 6677888 44322 112222233344567889999999999999999887642 15899999997
Q ss_pred CCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCc-----
Q 037640 162 LSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETS----- 236 (398)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~----- 236 (398)
....... ....++++.+||+++++++||||||||+..++.+++.+++.+|+..+++|||+++.....
T Consensus 248 ~~~~~~~--------~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~ 319 (480)
T PLN00164 248 SLAFTPP--------AEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHP 319 (480)
T ss_pred cccccCC--------CccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccc
Confidence 4321110 011356799999999989999999999999999999999999999999999999853210
Q ss_pred --hhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHH
Q 037640 237 --KELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVH 314 (398)
Q Consensus 237 --~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~ 314 (398)
....++ +|++|.++++++++++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++
T Consensus 320 ~~~~~~~~-lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~ 398 (480)
T PLN00164 320 TDADLDEL-LPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVA 398 (480)
T ss_pred cccchhhh-CChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHH
Confidence 011223 88999999999999999999999999999999999999999999999999999999999999999998866
Q ss_pred HhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCc-chHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 037640 315 LLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGN-DGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQD 393 (398)
Q Consensus 315 ~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 393 (398)
.+|+|+.+...+ ++++.+++++|.++|+++|.|++ +++.+|++|+++++++++++.+||||.+++++||++
T Consensus 399 ~~gvG~~~~~~~--------~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~~v~~ 470 (480)
T PLN00164 399 DMGVAVAMKVDR--------KRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQRLARE 470 (480)
T ss_pred HhCeEEEecccc--------ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 799999985320 00124799999999999998776 589999999999999999999999999999999999
Q ss_pred HHcC
Q 037640 394 IMKH 397 (398)
Q Consensus 394 ~~~~ 397 (398)
+...
T Consensus 471 ~~~~ 474 (480)
T PLN00164 471 IRHG 474 (480)
T ss_pred HHhc
Confidence 8753
No 7
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=4.2e-58 Score=452.53 Aligned_cols=357 Identities=30% Similarity=0.504 Sum_probs=279.9
Q ss_pred HHHHH-HhchHHHHHHHhhc----CCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhc------cc
Q 037640 11 FFTAA-DKLLEPVENLFGQL----KPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASK------FL 79 (398)
Q Consensus 11 l~~a~-~~~~~~l~~~L~~~----~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~------~~ 79 (398)
++.++ +.+.+.+.++|+++ ..+++|||+|.+++|+..+|+++|||.+.|++++++.+..+.++.... +.
T Consensus 79 ~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~ 158 (451)
T PLN02410 79 FLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPL 158 (451)
T ss_pred HHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCc
Confidence 44444 46677788877763 246799999999999999999999999999999999887776543211 11
Q ss_pred ccccCCCCccccCCCCccccccccccc-ccCCc--chHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceee
Q 037640 80 ESISSESEYFSVPGLPDKIELTKKQVD-STQGQ--KFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWC 156 (398)
Q Consensus 80 ~~~~~~~~~~~~pg~~~~~~~~~~~l~-~~~~~--~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~ 156 (398)
.... ......+|++++ ++..+++ +.... .+...+.... ....++++++|||++||+.++++++...+++++.
T Consensus 159 ~~~~-~~~~~~iPg~~~---~~~~dlp~~~~~~~~~~~~~~~~~~-~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~ 233 (451)
T PLN02410 159 KEPK-GQQNELVPEFHP---LRCKDFPVSHWASLESIMELYRNTV-DKRTASSVIINTASCLESSSLSRLQQQLQIPVYP 233 (451)
T ss_pred cccc-cCccccCCCCCC---CChHHCcchhcCCcHHHHHHHHHHh-hcccCCEEEEeChHHhhHHHHHHHHhccCCCEEE
Confidence 1110 112235777765 5556666 43211 1222222222 2457889999999999999999998777779999
Q ss_pred cCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCC-
Q 037640 157 IGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGET- 235 (398)
Q Consensus 157 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~- 235 (398)
|||++...+.. ........++.+|||++++++||||||||+..++.+++.+++.+|+..+++|||+++....
T Consensus 234 vGpl~~~~~~~-------~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~ 306 (451)
T PLN02410 234 IGPLHLVASAP-------TSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVR 306 (451)
T ss_pred ecccccccCCC-------ccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCccc
Confidence 99997532110 0111123468899999988999999999999999999999999999999999999984311
Q ss_pred chhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHH
Q 037640 236 SKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHL 315 (398)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 315 (398)
....... +|++|.+++++++ .+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.
T Consensus 307 ~~~~~~~-lp~~f~er~~~~g-~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~ 384 (451)
T PLN02410 307 GSEWIES-LPKEFSKIISGRG-YIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECV 384 (451)
T ss_pred ccchhhc-CChhHHHhccCCe-EEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHH
Confidence 0010011 7999999987665 5558999999999999999999999999999999999999999999999999999767
Q ss_pred hcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 316 LKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 316 ~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
+|+|+.+.. .+++++|+++|+++|.+++ +++||+||+++++.++.++.+||||.+++++||+.+.
T Consensus 385 ~~~G~~~~~--------------~~~~~~v~~av~~lm~~~~-~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~ 449 (451)
T PLN02410 385 WKIGIQVEG--------------DLDRGAVERAVKRLMVEEE-GEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMR 449 (451)
T ss_pred hCeeEEeCC--------------cccHHHHHHHHHHHHcCCc-HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 799999963 4899999999999998654 8899999999999999999999999999999999886
Q ss_pred c
Q 037640 396 K 396 (398)
Q Consensus 396 ~ 396 (398)
.
T Consensus 450 ~ 450 (451)
T PLN02410 450 T 450 (451)
T ss_pred h
Confidence 4
No 8
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=5.4e-58 Score=451.58 Aligned_cols=371 Identities=25% Similarity=0.474 Sum_probs=282.6
Q ss_pred hHHHHHHHHHhc----hHHHHHHHhhcC---CCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhh-cc
Q 037640 7 LALDFFTAADKL----LEPVENLFGQLK---PQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFAS-KF 78 (398)
Q Consensus 7 ~~~~l~~a~~~~----~~~l~~~L~~~~---~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~ 78 (398)
....++.++..+ .+.+.+++++.. .+++|||+|.+++|+..+|+++|||.+.|++++++.+..+++.+.. ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~ 162 (468)
T PLN02207 83 VEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSK 162 (468)
T ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhcccc
Confidence 344566666666 445666665421 2349999999999999999999999999999999888877665421 11
Q ss_pred cccc--cCCCCccccCCCCccccccccccc-ccCCcchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHh-hcCCce
Q 037640 79 LESI--SSESEYFSVPGLPDKIELTKKQVD-STQGQKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKK-ISRDKA 154 (398)
Q Consensus 79 ~~~~--~~~~~~~~~pg~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~-~~~~~v 154 (398)
.... +....+..+||+++. ++..++| ++........+.+......+++++++||+++||+++++.++. ...+++
T Consensus 163 ~~~~~~~~~~~~~~vPgl~~~--l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v 240 (468)
T PLN02207 163 DTSVFVRNSEEMLSIPGFVNP--VPANVLPSALFVEDGYDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSV 240 (468)
T ss_pred ccccCcCCCCCeEECCCCCCC--CChHHCcchhcCCccHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCCCcE
Confidence 1111 111123467887322 6778888 553322122222333456778999999999999999988865 344789
Q ss_pred eecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCC
Q 037640 155 WCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGE 234 (398)
Q Consensus 155 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 234 (398)
+.|||++......... .+ . ..++++.+|||++++++||||||||...++.+++++++.+|+..+++|||+++...
T Consensus 241 ~~VGPl~~~~~~~~~~---~~-~-~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~~~ 315 (468)
T PLN02207 241 YAVGPIFDLKAQPHPE---QD-L-ARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRTEE 315 (468)
T ss_pred EEecCCcccccCCCCc---cc-c-chhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeCCC
Confidence 9999997543211000 00 0 12367999999998889999999999999999999999999999999999998532
Q ss_pred CchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHH
Q 037640 235 TSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVH 314 (398)
Q Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~ 314 (398)
. ...++ +|++|.+++++++ .+.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++
T Consensus 316 ~--~~~~~-lp~~f~er~~~~g-~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~ 391 (468)
T PLN02207 316 V--TNDDL-LPEGFLDRVSGRG-MICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVK 391 (468)
T ss_pred c--ccccc-CCHHHHhhcCCCe-EEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHH
Confidence 1 01123 8899998886555 566999999999999999999999999999999999999999999999999998876
Q ss_pred HhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 037640 315 LLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDI 394 (398)
Q Consensus 315 ~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (398)
.+|+|+.+..+.. + +.++.+++++|.++|+++|.+ ++++||+||++|++++++++.+||||.+++++||+++
T Consensus 392 ~~gvGv~~~~~~~--~----~~~~~v~~e~i~~av~~vm~~--~~~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~ 463 (468)
T PLN02207 392 ELKLAVELKLDYR--V----HSDEIVNANEIETAIRCVMNK--DNNVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDV 463 (468)
T ss_pred HhCceEEEecccc--c----ccCCcccHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 6999998853200 0 001246999999999999962 4679999999999999999999999999999999998
Q ss_pred Hc
Q 037640 395 MK 396 (398)
Q Consensus 395 ~~ 396 (398)
..
T Consensus 464 ~~ 465 (468)
T PLN02207 464 IG 465 (468)
T ss_pred Hh
Confidence 64
No 9
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=4.8e-58 Score=451.03 Aligned_cols=350 Identities=22% Similarity=0.365 Sum_probs=280.6
Q ss_pred HHHHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCc
Q 037640 9 LDFFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEY 88 (398)
Q Consensus 9 ~~l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
..+.+++..+.+.+++++++ .++||||+| ++.|+..+|+++|||++.|++++++... +.+.+. ... .
T Consensus 86 ~~~~~~~~~~~~~l~~~L~~--~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~----~~~-----~ 152 (442)
T PLN02208 86 NLLSEALDLTRDQVEAAVRA--LRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG----GKL-----G 152 (442)
T ss_pred HHHHHHHHHHHHHHHHHHhh--CCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc----ccc-----C
Confidence 34666678889999999988 689999999 6899999999999999999999988654 332211 111 1
Q ss_pred cccCCCCcc-ccccccccc-ccCCcc-hHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecCcccCCCc
Q 037640 89 FSVPGLPDK-IELTKKQVD-STQGQK-FKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIGPVSLSNK 165 (398)
Q Consensus 89 ~~~pg~~~~-~~~~~~~l~-~~~~~~-~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~ 165 (398)
..+|++|.. ..++..+++ +..... +..+.+++.+....++++++|||++||+.+++++.+.++++++.|||++....
T Consensus 153 ~~~pglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~ 232 (442)
T PLN02208 153 VPPPGYPSSKVLFRENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD 232 (442)
T ss_pred CCCCCCCCcccccCHHHcCcccccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC
Confidence 225777642 235556666 422112 23333333345567889999999999999999998887789999999975422
Q ss_pred ccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCc
Q 037640 166 EYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVE 245 (398)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~ 245 (398)
.. ...++++.+|||++++++||||||||+..++.+++.+++.+++..+.+++|+++.........++ +|
T Consensus 233 ~~----------~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~-lp 301 (442)
T PLN02208 233 TS----------KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEG-LP 301 (442)
T ss_pred CC----------CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhh-CC
Confidence 00 11357899999999888999999999999999999999999988899999998754111011112 89
Q ss_pred hhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccC
Q 037640 246 DGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVE 325 (398)
Q Consensus 246 ~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 325 (398)
++|.+++++.|+++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+++++.+|+|+.++..
T Consensus 302 ~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 381 (442)
T PLN02208 302 EGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE 381 (442)
T ss_pred HHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999986569999999753
Q ss_pred CCCCccccccccccccHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHc
Q 037640 326 NPMTWGEEQNIGVLVKRDDVKNAVERLMDEG-NDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMK 396 (398)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (398)
+ ++.+++++|+++|+++|+++ ++++.+|+||+++++.+. ++|||.+++++||+++..
T Consensus 382 ~----------~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 382 K----------TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQE 439 (442)
T ss_pred c----------CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHH
Confidence 1 12489999999999999876 568999999999999973 478999999999999865
No 10
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=7.3e-58 Score=447.82 Aligned_cols=353 Identities=24% Similarity=0.387 Sum_probs=284.0
Q ss_pred hHHHHHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCC
Q 037640 7 LALDFFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSES 86 (398)
Q Consensus 7 ~~~~l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
....++.+++.+.+.+.++|++ .++||||+|. +.|+..+|+++|||.+.|++++++.+..+.. . ....
T Consensus 85 ~~~~~~~a~~~~~~~~~~~l~~--~~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~----~~~~---- 152 (453)
T PLN02764 85 SADLLMSAMDLTRDQVEVVVRA--VEPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-P----GGEL---- 152 (453)
T ss_pred HHHHHHHHHHHhHHHHHHHHHh--CCCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-c----cccC----
Confidence 3456778888889999999988 6789999994 8999999999999999999999988877652 1 1111
Q ss_pred CccccCCCCcc-ccccccccc-ccC--C-c---chHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecC
Q 037640 87 EYFSVPGLPDK-IELTKKQVD-STQ--G-Q---KFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIG 158 (398)
Q Consensus 87 ~~~~~pg~~~~-~~~~~~~l~-~~~--~-~---~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vG 158 (398)
...+||+|.. ..++..+++ +.. . . ....+..++.+....++++++|||++||+.++++++...+++++.||
T Consensus 153 -~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VG 231 (453)
T PLN02764 153 -GVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTG 231 (453)
T ss_pred -CCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEec
Confidence 1224677632 124455555 321 1 1 12334455545567788999999999999999999775557899999
Q ss_pred cccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchh
Q 037640 159 PVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKE 238 (398)
Q Consensus 159 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 238 (398)
|++...... ...++++.+|||++++++||||||||+..++.+++.+++.+|+..+.+|+|+++.......
T Consensus 232 PL~~~~~~~----------~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~ 301 (453)
T PLN02764 232 PVFPEPDKT----------RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSST 301 (453)
T ss_pred cCccCcccc----------ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcc
Confidence 997532100 0024679999999999999999999999999999999999999999999999985321111
Q ss_pred hhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcc
Q 037640 239 LKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKI 318 (398)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~ 318 (398)
...+ +|++|.+++++.++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.+|+
T Consensus 302 ~~~~-lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~ 380 (453)
T PLN02764 302 IQEA-LPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKV 380 (453)
T ss_pred hhhh-CCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhce
Confidence 1122 899999999999999999999999999999999999999999999999999999999999999999999757899
Q ss_pred eEEeccCCCCCccccccccccccHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 037640 319 GVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEG-NDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMKH 397 (398)
Q Consensus 319 g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 397 (398)
|+.+..++ .+.+++++|+++|+++|+++ ++++.+|++++++++.++ ++|||.+++++||+++.+.
T Consensus 381 gv~~~~~~----------~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~----~~GSS~~~l~~lv~~~~~~ 446 (453)
T PLN02764 381 SVEVAREE----------TGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA----SPGLLTGYVDNFIESLQDL 446 (453)
T ss_pred EEEecccc----------CCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHh
Confidence 99875320 02489999999999999875 578899999999999984 6899999999999998753
No 11
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1.3e-57 Score=450.71 Aligned_cols=370 Identities=24% Similarity=0.417 Sum_probs=284.4
Q ss_pred HHHHHHH-HhchHHHHHHHhhc---CCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhc-cccccc
Q 037640 9 LDFFTAA-DKLLEPVENLFGQL---KPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASK-FLESIS 83 (398)
Q Consensus 9 ~~l~~a~-~~~~~~l~~~L~~~---~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~-~~~~~~ 83 (398)
..++.++ ..+.+.+.++|+.+ ..+++|||+|.+++|+..+|+++|||.++|++++++.+..++++.... ++....
T Consensus 89 ~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~~~~~~~ 168 (480)
T PLN02555 89 DLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPTET 168 (480)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCCCccccc
Confidence 3455555 36788888888754 134599999999999999999999999999999999988887764211 111111
Q ss_pred CCCCccccCCCCccccccccccc-ccCCc----chHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecC
Q 037640 84 SESEYFSVPGLPDKIELTKKQVD-STQGQ----KFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIG 158 (398)
Q Consensus 84 ~~~~~~~~pg~~~~~~~~~~~l~-~~~~~----~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vG 158 (398)
.+..+..+||+|. ++..++| ++... .....+.+.......++++++|||++||+.+++.++... + ++.||
T Consensus 169 ~~~~~~~iPglp~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~-~-v~~iG 243 (480)
T PLN02555 169 EPEIDVQLPCMPL---LKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLC-P-IKPVG 243 (480)
T ss_pred CCCceeecCCCCC---cCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCC-C-EEEeC
Confidence 1122345788875 6778888 55421 112222223344567889999999999999999887644 4 99999
Q ss_pred cccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchh
Q 037640 159 PVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKE 238 (398)
Q Consensus 159 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 238 (398)
|++........ ..+......++++.+||+++++++||||||||+..++.+++.+++.+|+..+++|||+++.......
T Consensus 244 Pl~~~~~~~~~--~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~ 321 (480)
T PLN02555 244 PLFKMAKTPNS--DVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSG 321 (480)
T ss_pred cccCccccccc--cccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCccccc
Confidence 99753211100 0111111224679999999988899999999999999999999999999999999999874311000
Q ss_pred h-hhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhc
Q 037640 239 L-KKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLK 317 (398)
Q Consensus 239 ~-~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g 317 (398)
. ..+ +|+++.+++++ |+.+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|
T Consensus 322 ~~~~~-lp~~~~~~~~~-~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~g 399 (480)
T PLN02555 322 VEPHV-LPEEFLEKAGD-KGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFK 399 (480)
T ss_pred chhhc-CChhhhhhcCC-ceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhC
Confidence 0 011 78888877644 55777999999999999999999999999999999999999999999999999999987779
Q ss_pred ceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHc
Q 037640 318 IGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMK 396 (398)
Q Consensus 318 ~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (398)
+|+.+.... . ..+.+++++|.++|+++|.+ ++++.+|+||++|+++.++++++||||.+++++||+++..
T Consensus 400 vGv~l~~~~------~--~~~~v~~~~v~~~v~~vm~~-~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~ 469 (480)
T PLN02555 400 TGVRLCRGE------A--ENKLITREEVAECLLEATVG-EKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVR 469 (480)
T ss_pred ceEEccCCc------c--ccCcCcHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHh
Confidence 999995310 0 01258999999999999975 5789999999999999999999999999999999999864
No 12
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=6.1e-58 Score=449.81 Aligned_cols=352 Identities=29% Similarity=0.513 Sum_probs=279.6
Q ss_pred HHHHHHHHhchHHHHHHHhhcC--CCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhc-cccccc-C
Q 037640 9 LDFFTAADKLLEPVENLFGQLK--PQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASK-FLESIS-S 84 (398)
Q Consensus 9 ~~l~~a~~~~~~~l~~~L~~~~--~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~-~~~~~~-~ 84 (398)
..++.+...+.+.+.++|+++. .+++|||+|.+++|+..+|+++|||.+.|++++++.+..+.+.+... ...... .
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~ 166 (451)
T PLN03004 87 SLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTPGKNLK 166 (451)
T ss_pred HHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccccccccccc
Confidence 3566666778888888888742 24699999999999999999999999999999999988887754311 000000 0
Q ss_pred CCCccccCCCCccccccccccc-ccCCc--chHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcC-CceeecCcc
Q 037640 85 ESEYFSVPGLPDKIELTKKQVD-STQGQ--KFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISR-DKAWCIGPV 160 (398)
Q Consensus 85 ~~~~~~~pg~~~~~~~~~~~l~-~~~~~--~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~-~~v~~vGpl 160 (398)
...+..+||+|. ++..++| ++... .....+.+.......++++++|||++||+.+++.++..+. ++++.|||+
T Consensus 167 ~~~~v~iPg~p~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl 243 (451)
T PLN03004 167 DIPTVHIPGVPP---MKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPL 243 (451)
T ss_pred cCCeecCCCCCC---CChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeee
Confidence 112345788875 6677888 55322 1223334444555678899999999999999999976543 689999999
Q ss_pred cCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCc----
Q 037640 161 SLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETS---- 236 (398)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~---- 236 (398)
+...... . +. . ..++++.+|||++++++||||||||+..++.+++++++.+|+..+++|||+++.....
T Consensus 244 ~~~~~~~-~----~~-~-~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~ 316 (451)
T PLN03004 244 IVNGRIE-D----RN-D-NKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTE 316 (451)
T ss_pred ccCcccc-c----cc-c-chhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccc
Confidence 7422100 0 00 0 1235699999999889999999999999999999999999999999999999853110
Q ss_pred hhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHh
Q 037640 237 KELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLL 316 (398)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~ 316 (398)
.....+ +|++|.+++++.|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++++
T Consensus 317 ~~~~~~-lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~ 395 (451)
T PLN03004 317 LDLKSL-LPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEI 395 (451)
T ss_pred cchhhh-CChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHh
Confidence 011223 7899999999999999999999999999999999999999999999999999999999999999999997568
Q ss_pred cceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHH
Q 037640 317 KIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHL 385 (398)
Q Consensus 317 g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~ 385 (398)
|+|+.++..+ ++.+++++|+++|+++|+|+ +||+||++++++.+.++++||||.+
T Consensus 396 g~g~~l~~~~----------~~~~~~e~l~~av~~vm~~~----~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 396 KIAISMNESE----------TGFVSSTEVEKRVQEIIGEC----PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred CceEEecCCc----------CCccCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999997431 12479999999999999876 9999999999999999999999864
No 13
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.8e-57 Score=442.69 Aligned_cols=359 Identities=26% Similarity=0.464 Sum_probs=280.2
Q ss_pred HHHHHHHH-HhchHHHHHHHhhcC--CCC-cEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhccccccc
Q 037640 8 ALDFFTAA-DKLLEPVENLFGQLK--PQP-NCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESIS 83 (398)
Q Consensus 8 ~~~l~~a~-~~~~~~l~~~L~~~~--~~~-D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (398)
+..++.++ ..+.+.+.++|+++. .+| +|||+|.+++|+..+|+++|||.+.|++++++.+..+++.... .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~---~--- 149 (449)
T PLN02173 76 VPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYIN---N--- 149 (449)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhc---c---
Confidence 34566666 477889999988641 244 9999999999999999999999999999988887665532110 0
Q ss_pred CCCCccccCCCCccccccccccc-ccCC--cc--hHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecC
Q 037640 84 SESEYFSVPGLPDKIELTKKQVD-STQG--QK--FKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIG 158 (398)
Q Consensus 84 ~~~~~~~~pg~~~~~~~~~~~l~-~~~~--~~--~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vG 158 (398)
. .....+|++|. ++..++| ++.. .. ....+.+..+...+++++++|||++||+.++++++.. ++++.||
T Consensus 150 ~-~~~~~~pg~p~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~--~~v~~VG 223 (449)
T PLN02173 150 G-SLTLPIKDLPL---LELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV--CPVLTIG 223 (449)
T ss_pred C-CccCCCCCCCC---CChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc--CCeeEEc
Confidence 1 12234677765 5667887 5532 11 2222223334567788999999999999999988653 4799999
Q ss_pred cccCCCccc-chhhccCC--CCC--CChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCC
Q 037640 159 PVSLSNKEY-SDKAQRGN--TSS--LDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREG 233 (398)
Q Consensus 159 pl~~~~~~~-~~~~~~~~--~~~--~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 233 (398)
|++...... ......+. ..+ ..++++.+||+++++++||||||||+..++.+++.+++.+| .+.+|+|+++..
T Consensus 224 Pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~ 301 (449)
T PLN02173 224 PTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRAS 301 (449)
T ss_pred ccCchhhccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEecc
Confidence 997421000 00000010 001 12346999999999999999999999999999999999999 778899999853
Q ss_pred CCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHH
Q 037640 234 ETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAV 313 (398)
Q Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 313 (398)
... . +|+++.+++.+.|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||++++
T Consensus 302 ~~~----~--lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~ 375 (449)
T PLN02173 302 EES----K--LPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQ 375 (449)
T ss_pred chh----c--ccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHH
Confidence 211 1 7889988887788998899999999999999999999999999999999999999999999999999998
Q ss_pred HHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 037640 314 HLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQD 393 (398)
Q Consensus 314 ~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 393 (398)
+.+|+|+.+...+ .++.++.++|.++|+++|.| ++++.+|+||++++++.++++++||||.+++++||++
T Consensus 376 ~~~g~Gv~v~~~~---------~~~~~~~e~v~~av~~vm~~-~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~ 445 (449)
T PLN02173 376 DVWKVGVRVKAEK---------ESGIAKREEIEFSIKEVMEG-EKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSK 445 (449)
T ss_pred HHhCceEEEeecc---------cCCcccHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 6779999996431 01247999999999999975 5578999999999999999999999999999999998
Q ss_pred HHc
Q 037640 394 IMK 396 (398)
Q Consensus 394 ~~~ 396 (398)
+..
T Consensus 446 ~~~ 448 (449)
T PLN02173 446 IQI 448 (449)
T ss_pred hcc
Confidence 863
No 14
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.2e-56 Score=443.77 Aligned_cols=363 Identities=26% Similarity=0.502 Sum_probs=279.3
Q ss_pred HHHHHH-HhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhh-cccccccCCCC
Q 037640 10 DFFTAA-DKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFAS-KFLESISSESE 87 (398)
Q Consensus 10 ~l~~a~-~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 87 (398)
.++.++ +.+.+.+.++|++ .++||||+|.+++|+..+|+++|||.+.|++++++.+..+++.... ...........
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~--~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~~~~ 159 (456)
T PLN02210 82 TLLKSLNKVGAKNLSKIIEE--KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQ 159 (456)
T ss_pred HHHHHHHHhhhHHHHHHHhc--CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcccccCC
Confidence 455555 4677889999988 7899999999999999999999999999999998888877654321 11111111112
Q ss_pred ccccCCCCccccccccccc-ccCCc-c--hHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecCcccCC
Q 037640 88 YFSVPGLPDKIELTKKQVD-STQGQ-K--FKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIGPVSLS 163 (398)
Q Consensus 88 ~~~~pg~~~~~~~~~~~l~-~~~~~-~--~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~ 163 (398)
+..+|+++. ++..+++ ++... . +.....++.+....++++++|||++||+.+++++++ . +++++|||++..
T Consensus 160 ~~~~Pgl~~---~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~-~~v~~VGPl~~~ 234 (456)
T PLN02210 160 TVELPALPL---LEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD-L-KPVIPIGPLVSP 234 (456)
T ss_pred eeeCCCCCC---CChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh-c-CCEEEEcccCch
Confidence 245777764 5566777 44322 1 223333444445667899999999999999998876 3 589999999742
Q ss_pred Cc--ccchhhccCC--CCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhh
Q 037640 164 NK--EYSDKAQRGN--TSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKEL 239 (398)
Q Consensus 164 ~~--~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 239 (398)
.. ........+. .....++++.+||+++++++||||||||....+.+++++++.+|+..+++|||+++......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~-- 312 (456)
T PLN02210 235 FLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQ-- 312 (456)
T ss_pred hhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcccc--
Confidence 10 0000000011 01123567899999998889999999999999999999999999999999999998542110
Q ss_pred hhccCchhHHHHhc-CCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcc
Q 037640 240 KKWVVEDGFEERIK-GRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKI 318 (398)
Q Consensus 240 ~~~~l~~~~~~~~~-~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~ 318 (398)
.++.+.++.. +.+ ++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+
T Consensus 313 ----~~~~~~~~~~~~~g-~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~ 387 (456)
T PLN02210 313 ----NVQVLQEMVKEGQG-VVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGI 387 (456)
T ss_pred ----chhhHHhhccCCCe-EEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCe
Confidence 3345556653 444 5669999999999999999999999999999999999999999999999999999745999
Q ss_pred eEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHc
Q 037640 319 GVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMK 396 (398)
Q Consensus 319 g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (398)
|+.+...+ .++.+++++|+++|+++|.+ ++++++|+||++|++..++++++||||.+++++||+++..
T Consensus 388 G~~l~~~~---------~~~~~~~~~l~~av~~~m~~-~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~~ 455 (456)
T PLN02210 388 GVRMRNDA---------VDGELKVEEVERCIEAVTEG-PAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDITI 455 (456)
T ss_pred EEEEeccc---------cCCcCCHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 99996420 01258999999999999975 5588999999999999999999999999999999999864
No 15
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.4e-56 Score=444.56 Aligned_cols=371 Identities=27% Similarity=0.478 Sum_probs=276.7
Q ss_pred HHHHHHHhchHHHHHHHhhcC--------CCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhc-c--
Q 037640 10 DFFTAADKLLEPVENLFGQLK--------PQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASK-F-- 78 (398)
Q Consensus 10 ~l~~a~~~~~~~l~~~L~~~~--------~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~-~-- 78 (398)
.+...+..+.+.+.+.|+++. .+++|||+|.+++|+..+|+++|||++.|++++++.+..+++++... .
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~ 161 (481)
T PLN02554 82 TFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKK 161 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccc
Confidence 333444444555555544330 12489999999999999999999999999999999998887765421 1
Q ss_pred cc--cccCCCCccccCCCCccccccccccc-ccCCcchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhh--cCCc
Q 037640 79 LE--SISSESEYFSVPGLPDKIELTKKQVD-STQGQKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKI--SRDK 153 (398)
Q Consensus 79 ~~--~~~~~~~~~~~pg~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~--~~~~ 153 (398)
.. ..+....+..+|+++.. ++..++| ++....+...+.+.......++++++||+++||+.+...+... ..++
T Consensus 162 ~~~~~~~~~~~~v~iPgl~~p--l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~ 239 (481)
T PLN02554 162 YDVSELEDSEVELDVPSLTRP--YPVKCLPSVLLSKEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPP 239 (481)
T ss_pred cCccccCCCCceeECCCCCCC--CCHHHCCCcccCHHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCC
Confidence 11 11111123457887422 5666777 5543333333334445567789999999999999998888653 3368
Q ss_pred eeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCC
Q 037640 154 AWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREG 233 (398)
Q Consensus 154 v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 233 (398)
++.|||++...+.... .....++++.+||+++++++||||||||+..++.+++.+++.+|+..+++|||+++..
T Consensus 240 v~~vGpl~~~~~~~~~------~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~ 313 (481)
T PLN02554 240 VYPVGPVLHLENSGDD------SKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRA 313 (481)
T ss_pred EEEeCCCccccccccc------cccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 9999999432211100 0011356899999999888999999999999999999999999999999999999753
Q ss_pred CC---------chhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccc
Q 037640 234 ET---------SKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFAD 304 (398)
Q Consensus 234 ~~---------~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~D 304 (398)
.. .....++ +|++|.+++.+++ ++.+|+||.+||+|+++++|||||||||++||+++|||||+||+++|
T Consensus 314 ~~~~~~~~~~~~~~~~~~-lp~~~~~r~~~~g-~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~D 391 (481)
T PLN02554 314 SPNIMKEPPGEFTNLEEI-LPEGFLDRTKDIG-KVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAE 391 (481)
T ss_pred cccccccccccccchhhh-CChHHHHHhccCc-eEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCcccc
Confidence 11 0011122 6889988886555 56699999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhcceEEeccCCCCCccc-cccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCch
Q 037640 305 QFTNEKLAVHLLKIGVKIGVENPMTWGE-EQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSS 383 (398)
Q Consensus 305 Q~~na~~v~~~~g~g~~l~~~~~~~~~~-~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~ 383 (398)
|+.||+++++++|+|+.+.... +++ .....+.+++++|+++|+++|++. ++||+||++++++++.++++||||
T Consensus 392 Q~~Na~~~v~~~g~Gv~l~~~~---~~~~~~~~~~~~~~e~l~~av~~vm~~~---~~~r~~a~~l~~~~~~av~~gGss 465 (481)
T PLN02554 392 QKFNAFEMVEELGLAVEIRKYW---RGDLLAGEMETVTAEEIERGIRCLMEQD---SDVRKRVKEMSEKCHVALMDGGSS 465 (481)
T ss_pred chhhHHHHHHHhCceEEeeccc---cccccccccCeEcHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHhcCCChH
Confidence 9999965447999999996310 000 000112589999999999999621 499999999999999999999999
Q ss_pred HHHHHHHHHHHHc
Q 037640 384 HLNITLLLQDIMK 396 (398)
Q Consensus 384 ~~~~~~~~~~~~~ 396 (398)
.+++++||+++..
T Consensus 466 ~~~l~~lv~~~~~ 478 (481)
T PLN02554 466 HTALKKFIQDVTK 478 (481)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 16
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=5.8e-56 Score=437.66 Aligned_cols=365 Identities=29% Similarity=0.428 Sum_probs=278.9
Q ss_pred HHHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCcc
Q 037640 10 DFFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEYF 89 (398)
Q Consensus 10 ~l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
.+..+.+.+.+.+.+++++ .+++|||+|.+++|+..+|+++|||.+.|++++++....++++...........+....
T Consensus 90 ~~~~~~~~~~~~~~~~l~~--~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (472)
T PLN02670 90 LLKKAFDLLEPPLTTFLET--SKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDF 167 (472)
T ss_pred HHHHHHHHhHHHHHHHHHh--CCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCccccc
Confidence 4556678889999999988 68999999999999999999999999999999998887765442211111111111111
Q ss_pred -ccCCCCc---cccccccccc-ccCC---c-c-hHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecCc
Q 037640 90 -SVPGLPD---KIELTKKQVD-STQG---Q-K-FKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIGP 159 (398)
Q Consensus 90 -~~pg~~~---~~~~~~~~l~-~~~~---~-~-~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vGp 159 (398)
.+|++.+ .+.++..+++ ++.. . . ...+. +......+++++++|||++||+.++++++..++++++.|||
T Consensus 168 ~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~-~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGP 246 (472)
T PLN02670 168 TVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSV-RFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGF 246 (472)
T ss_pred cCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHH-HHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEec
Confidence 2444321 1235566777 5432 1 1 22222 33334567889999999999999999998766678999999
Q ss_pred ccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCc-hh
Q 037640 160 VSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETS-KE 238 (398)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~-~~ 238 (398)
+......... ...... ...+++.+|||++++++||||||||+..++.+++.+++.+|+..+++|||+++..... .+
T Consensus 247 l~~~~~~~~~--~~~~~~-~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~ 323 (472)
T PLN02670 247 LPPVIEDDEE--DDTIDV-KGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQN 323 (472)
T ss_pred CCcccccccc--cccccc-chhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccc
Confidence 9653110000 000000 0125799999999888999999999999999999999999999999999999853211 11
Q ss_pred hhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcc
Q 037640 239 LKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKI 318 (398)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~ 318 (398)
..++ +|++|.+++++.++++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++ +++|+
T Consensus 324 ~~~~-lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v-~~~g~ 401 (472)
T PLN02670 324 ALEM-LPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLL-HGKKL 401 (472)
T ss_pred hhhc-CChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHH-HHcCe
Confidence 1112 899999999999999999999999999999999999999999999999999999999999999999999 48999
Q ss_pred eEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHc
Q 037640 319 GVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMK 396 (398)
Q Consensus 319 g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (398)
|+.+...+ .++.+++++|+++|+++|.| +++++||+||+++++.+++ .+...+.+++++..+..
T Consensus 402 Gv~l~~~~---------~~~~~~~e~i~~av~~vm~~-~~g~~~r~~a~~l~~~~~~----~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 402 GLEVPRDE---------RDGSFTSDSVAESVRLAMVD-DAGEEIRDKAKEMRNLFGD----MDRNNRYVDELVHYLRE 465 (472)
T ss_pred eEEeeccc---------cCCcCcHHHHHHHHHHHhcC-cchHHHHHHHHHHHHHHhC----cchhHHHHHHHHHHHHH
Confidence 99996531 01248999999999999975 5688999999999999873 55567788888887754
No 17
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=4.5e-56 Score=437.05 Aligned_cols=358 Identities=26% Similarity=0.460 Sum_probs=276.4
Q ss_pred HHHHHHHHHhchHHHHHHHhhcC---CCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccC
Q 037640 8 ALDFFTAADKLLEPVENLFGQLK---PQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISS 84 (398)
Q Consensus 8 ~~~l~~a~~~~~~~l~~~L~~~~---~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (398)
...+..+...+.+.+.++|+++. .+++|||+|.+++|+.++|+++|||.+.|++++++.+..+++.... .
T Consensus 79 ~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~-------~ 151 (455)
T PLN02152 79 QNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTG-------N 151 (455)
T ss_pred HHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhcc-------C
Confidence 34556666778889998888642 3469999999999999999999999999999999998887665321 1
Q ss_pred CCCccccCCCCccccccccccc-ccCCc---c-hHHHHHHHHhhhc--cCcEEEEcChhhccHHHHHHHHhhcCCceeec
Q 037640 85 ESEYFSVPGLPDKIELTKKQVD-STQGQ---K-FKAFEYKIGAATL--AIDGVIINSFEELEPAYVKEYKKISRDKAWCI 157 (398)
Q Consensus 85 ~~~~~~~pg~~~~~~~~~~~l~-~~~~~---~-~~~~~~~~~~~~~--~~~~~li~s~~~le~~~~~~~~~~~~~~v~~v 157 (398)
.....+||++. ++..++| ++... . +...+.+..+... .++++++|||++||+.++++++. .+++.|
T Consensus 152 -~~~~~iPglp~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~---~~v~~V 224 (455)
T PLN02152 152 -NSVFEFPNLPS---LEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN---IEMVAV 224 (455)
T ss_pred -CCeeecCCCCC---CchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc---CCEEEE
Confidence 12345778765 6677888 55321 1 1233333333332 24689999999999999998854 369999
Q ss_pred CcccCCCcccchhhccCCCCC--CChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCC
Q 037640 158 GPVSLSNKEYSDKAQRGNTSS--LDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGET 235 (398)
Q Consensus 158 Gpl~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 235 (398)
||++........ ..++..+ ..+.++.+|||++++++||||||||+..++.+++++++.+|+..+++|||+++....
T Consensus 225 GPL~~~~~~~~~--~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~ 302 (455)
T PLN02152 225 GPLLPAEIFTGS--ESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLN 302 (455)
T ss_pred cccCcccccccc--ccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 999753210000 0011001 124579999999988899999999999999999999999999999999999985311
Q ss_pred c-----hhhhhc-cCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhH
Q 037640 236 S-----KELKKW-VVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNE 309 (398)
Q Consensus 236 ~-----~~~~~~-~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na 309 (398)
. .....+ .+|++|.++.++.+ .+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||
T Consensus 303 ~~~~~~~~~~~~~~~~~~f~e~~~~~g-~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na 381 (455)
T PLN02152 303 REAKIEGEEETEIEKIAGFRHELEEVG-MIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANA 381 (455)
T ss_pred cccccccccccccccchhHHHhccCCe-EEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHH
Confidence 0 000001 04678888775544 6669999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 037640 310 KLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITL 389 (398)
Q Consensus 310 ~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 389 (398)
+++++.+|+|+.+.... ++.+++++|+++|+++|+| +++.||+||++|++.++++..+||||.+++++
T Consensus 382 ~~~~~~~~~G~~~~~~~----------~~~~~~e~l~~av~~vm~~--~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~ 449 (455)
T PLN02152 382 KLLEEIWKTGVRVRENS----------EGLVERGEIRRCLEAVMEE--KSVELRESAEKWKRLAIEAGGEGGSSDKNVEA 449 (455)
T ss_pred HHHHHHhCceEEeecCc----------CCcCcHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 99976678888875321 1246999999999999974 36689999999999999999999999999999
Q ss_pred HHHHH
Q 037640 390 LLQDI 394 (398)
Q Consensus 390 ~~~~~ 394 (398)
||+++
T Consensus 450 li~~i 454 (455)
T PLN02152 450 FVKTL 454 (455)
T ss_pred HHHHh
Confidence 99986
No 18
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=6e-56 Score=436.67 Aligned_cols=351 Identities=25% Similarity=0.379 Sum_probs=276.2
Q ss_pred HHHHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCc
Q 037640 9 LDFFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEY 88 (398)
Q Consensus 9 ~~l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
..+++++..+.+.+.+++++ .++||||+|. ++|+..+|+++|||++.|++++++....+++... ..+
T Consensus 86 ~~~~~a~~~l~~~l~~~L~~--~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~-----~~~----- 152 (446)
T PLN00414 86 KPIFDAMDLLRDQIEAKVRA--LKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRA-----ELG----- 152 (446)
T ss_pred HHHHHHHHHHHHHHHHHHhc--CCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHh-----hcC-----
Confidence 34677778888999999987 6899999995 8999999999999999999999988887765211 000
Q ss_pred cccCCCCcc-ccccccc--cc-ccCCcchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecCcccCCC
Q 037640 89 FSVPGLPDK-IELTKKQ--VD-STQGQKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIGPVSLSN 164 (398)
Q Consensus 89 ~~~pg~~~~-~~~~~~~--l~-~~~~~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~ 164 (398)
..+|++|.. +.++..+ ++ ++.. ....+.+..+...+++++++|||++||+.++++++..++++++.|||++...
T Consensus 153 ~~~pg~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~ 230 (446)
T PLN00414 153 FPPPDYPLSKVALRGHDANVCSLFAN--SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEP 230 (446)
T ss_pred CCCCCCCCCcCcCchhhcccchhhcc--cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCc
Confidence 123555531 1122222 23 3321 1123333445566789999999999999999999876667899999997432
Q ss_pred cccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccC
Q 037640 165 KEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVV 244 (398)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l 244 (398)
... . + ...++++.+|||++++++||||||||...++.+++.+++.+|+..+.+|+|+++..........+ +
T Consensus 231 ~~~-~----~---~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~-l 301 (446)
T PLN00414 231 QNK-S----G---KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEA-L 301 (446)
T ss_pred ccc-c----C---cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhh-C
Confidence 110 0 0 01245689999999999999999999999999999999999999999999999863211111123 8
Q ss_pred chhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEecc
Q 037640 245 EDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~ 324 (398)
|++|.+++++.++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.+|+|+.+..
T Consensus 302 p~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~ 381 (446)
T PLN00414 302 PEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQR 381 (446)
T ss_pred ChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999768999999964
Q ss_pred CCCCCccccccccccccHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 037640 325 ENPMTWGEEQNIGVLVKRDDVKNAVERLMDEG-NDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMKH 397 (398)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 397 (398)
.+ ++.+++++|+++++++|.|+ +.++.+|++|+++++.+. ++||+| .++++||+++.+.
T Consensus 382 ~~----------~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~s-s~l~~~v~~~~~~ 441 (446)
T PLN00414 382 ED----------SGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLS-GYADKFVEALENE 441 (446)
T ss_pred cc----------CCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcH-HHHHHHHHHHHHh
Confidence 20 12489999999999999865 568899999999999974 457744 4489999998653
No 19
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=6.8e-56 Score=441.72 Aligned_cols=369 Identities=27% Similarity=0.502 Sum_probs=279.3
Q ss_pred HHHHHHHhchHHHHHHHhhcC-------C-CCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhh-cccc
Q 037640 10 DFFTAADKLLEPVENLFGQLK-------P-QPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFAS-KFLE 80 (398)
Q Consensus 10 ~l~~a~~~~~~~l~~~L~~~~-------~-~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~~~ 80 (398)
.+...+..+.+.+.+.|+++. . +++|||+|.+++|+..+|+++|||.+.|++++++.+..+++.+.. ....
T Consensus 88 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~~~~ 167 (475)
T PLN02167 88 YILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTA 167 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhccccc
Confidence 455555666677777666531 1 459999999999999999999999999999999888877765431 1111
Q ss_pred -cc--cCCCCccccCCCCccccccccccc-ccCCcchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhc--CCce
Q 037640 81 -SI--SSESEYFSVPGLPDKIELTKKQVD-STQGQKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKIS--RDKA 154 (398)
Q Consensus 81 -~~--~~~~~~~~~pg~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~--~~~v 154 (398)
.. .....+..+||++.. ++..+++ ++........+....+...+++++++|||++||+++++++++.. -+++
T Consensus 168 ~~~~~~~~~~~~~iPgl~~~--l~~~dlp~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v 245 (475)
T PLN02167 168 SEFDLSSGEEELPIPGFVNS--VPTKVLPPGLFMKESYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPENYPPV 245 (475)
T ss_pred cccccCCCCCeeECCCCCCC--CChhhCchhhhCcchHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhcccCCee
Confidence 00 011123457887432 4556676 44322222223333445677889999999999999999886541 1689
Q ss_pred eecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCC
Q 037640 155 WCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGE 234 (398)
Q Consensus 155 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 234 (398)
+.|||++....... .......++++.+||+++++++||||||||+..++.+++.+++.+|+..+++|||+++...
T Consensus 246 ~~vGpl~~~~~~~~-----~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~ 320 (475)
T PLN02167 246 YPVGPILSLKDRTS-----PNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNP 320 (475)
T ss_pred EEeccccccccccC-----CCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCc
Confidence 99999976321100 0000112367999999998889999999999999999999999999999999999998532
Q ss_pred Cc-hhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHH
Q 037640 235 TS-KELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAV 313 (398)
Q Consensus 235 ~~-~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 313 (398)
.. .....+ +|++|.+++++.+ .+.+|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||++++
T Consensus 321 ~~~~~~~~~-lp~~~~er~~~rg-~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~ 398 (475)
T PLN02167 321 AEYASPYEP-LPEGFMDRVMGRG-LVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMV 398 (475)
T ss_pred ccccchhhh-CChHHHHHhccCe-eeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHHHH
Confidence 10 001112 8999999988776 45589999999999999999999999999999999999999999999999998754
Q ss_pred HHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 037640 314 HLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQD 393 (398)
Q Consensus 314 ~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 393 (398)
+.+|+|+.+.... +++ .++.+++++|.++|+++|.++ +.||+||+++++.+++++.+||||.+++++||++
T Consensus 399 ~~~g~g~~~~~~~---~~~---~~~~~~~~~l~~av~~~m~~~---~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~ 469 (475)
T PLN02167 399 KELGLAVELRLDY---VSA---YGEIVKADEIAGAVRSLMDGE---DVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDD 469 (475)
T ss_pred HHhCeeEEeeccc---ccc---cCCcccHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 7999999986420 000 012479999999999999753 3899999999999999999999999999999999
Q ss_pred HHc
Q 037640 394 IMK 396 (398)
Q Consensus 394 ~~~ 396 (398)
+..
T Consensus 470 i~~ 472 (475)
T PLN02167 470 LLG 472 (475)
T ss_pred HHh
Confidence 875
No 20
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=2.4e-55 Score=433.99 Aligned_cols=353 Identities=26% Similarity=0.412 Sum_probs=273.5
Q ss_pred HHHHHHHHH-hchHHHHHHHhhcC--CCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhccc---cc
Q 037640 8 ALDFFTAAD-KLLEPVENLFGQLK--PQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFL---ES 81 (398)
Q Consensus 8 ~~~l~~a~~-~~~~~l~~~L~~~~--~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~---~~ 81 (398)
+..+..++. .+.+.+.++++++. .+++|||+|.+++|+..+|+++|||.+.|++++++....+++.+..... ..
T Consensus 76 ~~~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~ 155 (448)
T PLN02562 76 FFSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISE 155 (448)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhcccccc
Confidence 345666775 68899999998742 2358999999999999999999999999999999887776655432111 11
Q ss_pred ccCCC--Cc-cccCCCCccccccccccc-ccCCc----chHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHh----h
Q 037640 82 ISSES--EY-FSVPGLPDKIELTKKQVD-STQGQ----KFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKK----I 149 (398)
Q Consensus 82 ~~~~~--~~-~~~pg~~~~~~~~~~~l~-~~~~~----~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~----~ 149 (398)
.+.+. .+ ..+|++|. ++..+++ ++... .....+.+..+...+++++++|||++||+.+++.+.. .
T Consensus 156 ~~~~~~~~~~~~~Pg~~~---l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~ 232 (448)
T PLN02562 156 TGCPRQLEKICVLPEQPL---LSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNG 232 (448)
T ss_pred ccccccccccccCCCCCC---CChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccc
Confidence 11111 11 24677764 5667777 54321 1123333444555678899999999999988887653 2
Q ss_pred cCCceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcc-cCCHHHHHHHHHHHHhCCCCEEE
Q 037640 150 SRDKAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMC-NLIPSQMMELGLGLEASNRPFIW 228 (398)
Q Consensus 150 ~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~ 228 (398)
..++++.|||++....... .+......+.++.+||+++++++||||||||+. .++.+++++++.+|++.+++|||
T Consensus 233 ~~~~v~~iGpl~~~~~~~~----~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW 308 (448)
T PLN02562 233 QNPQILQIGPLHNQEATTI----TKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIW 308 (448)
T ss_pred cCCCEEEecCccccccccc----CCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEE
Confidence 3578999999976432100 000000123567899999988899999999987 57899999999999999999999
Q ss_pred EEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhh
Q 037640 229 VIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTN 308 (398)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~n 308 (398)
+++..... . +|++|.++.. +|+.+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.|
T Consensus 309 ~~~~~~~~----~--l~~~~~~~~~-~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~n 381 (448)
T PLN02562 309 VLNPVWRE----G--LPPGYVERVS-KQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVN 381 (448)
T ss_pred EEcCCchh----h--CCHHHHHHhc-cCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHH
Confidence 99753211 1 7888888774 466777999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 037640 309 EKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNIT 388 (398)
Q Consensus 309 a~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 388 (398)
|+++++.+|+|+.+. ++++++|.++|+++|.|+ +||+||+++++.++.+ .+||||.++++
T Consensus 382 a~~~~~~~g~g~~~~---------------~~~~~~l~~~v~~~l~~~----~~r~~a~~l~~~~~~~-~~gGSS~~nl~ 441 (448)
T PLN02562 382 CAYIVDVWKIGVRIS---------------GFGQKEVEEGLRKVMEDS----GMGERLMKLRERAMGE-EARLRSMMNFT 441 (448)
T ss_pred HHHHHHHhCceeEeC---------------CCCHHHHHHHHHHHhCCH----HHHHHHHHHHHHHHhc-CCCCCHHHHHH
Confidence 999975579998884 278999999999999876 9999999999998877 66799999999
Q ss_pred HHHHHH
Q 037640 389 LLLQDI 394 (398)
Q Consensus 389 ~~~~~~ 394 (398)
+||+++
T Consensus 442 ~~v~~~ 447 (448)
T PLN02562 442 TLKDEL 447 (448)
T ss_pred HHHHHh
Confidence 999986
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=7.9e-54 Score=425.88 Aligned_cols=362 Identities=31% Similarity=0.467 Sum_probs=276.0
Q ss_pred HHHHHH-HhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccC----
Q 037640 10 DFFTAA-DKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISS---- 84 (398)
Q Consensus 10 ~l~~a~-~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 84 (398)
.++.++ +.+.+.+.++++++..++||||+|.++.|+..+|+++|||++.|+++++..+..+.+.+........+.
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 164 (459)
T PLN02448 85 GFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSE 164 (459)
T ss_pred HHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCcccc
Confidence 344444 467888888888744578999999999999999999999999999999987777766542111000111
Q ss_pred --CCCccccCCCCccccccccccc-ccCCcc--hHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecCc
Q 037640 85 --ESEYFSVPGLPDKIELTKKQVD-STQGQK--FKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIGP 159 (398)
Q Consensus 85 --~~~~~~~pg~~~~~~~~~~~l~-~~~~~~--~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vGp 159 (398)
+.....+|+++. ++..+++ ++.... ....+.........++++++||+++||+.+++++...++++++.|||
T Consensus 165 ~~~~~~~~iPg~~~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP 241 (459)
T PLN02448 165 SGEERVDYIPGLSS---TRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGP 241 (459)
T ss_pred ccCCccccCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecC
Confidence 111113566654 5566677 543322 12223333344456789999999999999999998777778999999
Q ss_pred ccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhh
Q 037640 160 VSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKEL 239 (398)
Q Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 239 (398)
+......... .. +......+.++.+||+.+++++||||||||+...+.+++++++++|+..+++|||+++...
T Consensus 242 ~~~~~~~~~~-~~-~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~----- 314 (459)
T PLN02448 242 SIPYMELKDN-SS-SSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEA----- 314 (459)
T ss_pred cccccccCCC-cc-ccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCch-----
Confidence 9753211000 00 0000011347899999998889999999999998999999999999999999999886431
Q ss_pred hhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcce
Q 037640 240 KKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIG 319 (398)
Q Consensus 240 ~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g 319 (398)
.++.++. ..|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.+|+|
T Consensus 315 ------~~~~~~~-~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G 387 (459)
T PLN02448 315 ------SRLKEIC-GDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIG 387 (459)
T ss_pred ------hhHhHhc-cCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCce
Confidence 1222222 246777899999999999999999999999999999999999999999999999999997558999
Q ss_pred EEeccCCCCCccccccccccccHHHHHHHHHHHhccC-cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHc
Q 037640 320 VKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEG-NDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMK 396 (398)
Q Consensus 320 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (398)
+.+.... +.++.+++++|+++|+++|.++ +++++||+||++|++++++++.+||||.+++++||+.+++
T Consensus 388 ~~~~~~~--------~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 388 WRVKREV--------GEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred EEEeccc--------ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 9986320 0012579999999999999874 6889999999999999999999999999999999999875
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=3.8e-44 Score=359.04 Aligned_cols=315 Identities=17% Similarity=0.229 Sum_probs=236.2
Q ss_pred hHHHHHHHh--hcCCCCcEEEECCCcccHHHHHHHc-CCCeEEEechhHHHHHHHHHhhhhccccccc-CCCCccccCCC
Q 037640 19 LEPVENLFG--QLKPQPNCIISDVCLPYTAQIAGKF-NVPRIAFHGTCCFSVVCFNNIFASKFLESIS-SESEYFSVPGL 94 (398)
Q Consensus 19 ~~~l~~~L~--~~~~~~D~VI~D~~~~~~~~vA~~l-gIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pg~ 94 (398)
.+.+.++|+ + .+||+||+|++..|+..+|+++ ++|.|.+++....... . ..++ .|..++++|.+
T Consensus 123 ~~~~~~~L~~~~--~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~-~---------~~~gg~p~~~syvP~~ 190 (507)
T PHA03392 123 LPNVKNLIANKN--NKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAEN-F---------ETMGAVSRHPVYYPNL 190 (507)
T ss_pred CHHHHHHHhcCC--CceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhH-H---------HhhccCCCCCeeeCCc
Confidence 566778887 5 7899999999999999999999 9998877664433211 1 1223 45666777754
Q ss_pred Ccc----ccccccccccc---------C--CcchHHHHHH--------HHhhhccCcEEEEcChhhccHHHHHHHHhhcC
Q 037640 95 PDK----IELTKKQVDST---------Q--GQKFKAFEYK--------IGAATLAIDGVIINSFEELEPAYVKEYKKISR 151 (398)
Q Consensus 95 ~~~----~~~~~~~l~~~---------~--~~~~~~~~~~--------~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~ 151 (398)
... +++..+...++ . ......+.++ +.+..++.+.+++|+...++ ++++++
T Consensus 191 ~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d------~~rp~~ 264 (507)
T PHA03392 191 WRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFD------NNRPVP 264 (507)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCcccc------CCCCCC
Confidence 432 22211110000 0 0011111111 23344566789999999888 456889
Q ss_pred CceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCccc---CCHHHHHHHHHHHHhCCCCEEE
Q 037640 152 DKAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCN---LIPSQMMELGLGLEASNRPFIW 228 (398)
Q Consensus 152 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~ 228 (398)
+++++|||++.+.... ...++++.+|++.++ +++|||||||+.. ++.+.++.+++|+++.+++|||
T Consensus 265 p~v~~vGgi~~~~~~~----------~~l~~~l~~fl~~~~-~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw 333 (507)
T PHA03392 265 PSVQYLGGLHLHKKPP----------QPLDDYLEEFLNNST-NGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLW 333 (507)
T ss_pred CCeeeecccccCCCCC----------CCCCHHHHHHHhcCC-CcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEE
Confidence 9999999998643111 124688999999864 4699999999864 5678889999999999999999
Q ss_pred EEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhh
Q 037640 229 VIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTN 308 (398)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~n 308 (398)
+++.... + ...++|+.+.+|+||.+||+|+++++||||||+||++||+++|||+|++|+++||+.|
T Consensus 334 ~~~~~~~---------~-----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~N 399 (507)
T PHA03392 334 KYDGEVE---------A-----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYN 399 (507)
T ss_pred EECCCcC---------c-----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHH
Confidence 9975421 1 0125799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 037640 309 EKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNIT 388 (398)
Q Consensus 309 a~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 388 (398)
|+++ +++|+|+.++.. +++.++|.++|+++++|+ +|++||+++++.+++. .-+..+.+-
T Consensus 400 a~rv-~~~G~G~~l~~~-------------~~t~~~l~~ai~~vl~~~----~y~~~a~~ls~~~~~~---p~~~~~~av 458 (507)
T PHA03392 400 TNKY-VELGIGRALDTV-------------TVSAAQLVLAIVDVIENP----KYRKNLKELRHLIRHQ---PMTPLHKAI 458 (507)
T ss_pred HHHH-HHcCcEEEeccC-------------CcCHHHHHHHHHHHhCCH----HHHHHHHHHHHHHHhC---CCCHHHHHH
Confidence 9999 599999999876 589999999999999988 9999999999999853 333444454
Q ss_pred HHHHHHHcC
Q 037640 389 LLLQDIMKH 397 (398)
Q Consensus 389 ~~~~~~~~~ 397 (398)
.-++.+.+|
T Consensus 459 ~~iE~v~r~ 467 (507)
T PHA03392 459 WYTEHVIRN 467 (507)
T ss_pred HHHHHHHhC
Confidence 555555554
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=3.7e-46 Score=377.59 Aligned_cols=290 Identities=21% Similarity=0.325 Sum_probs=196.1
Q ss_pred HHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccc-cCCCCccccCCCCc----c
Q 037640 23 ENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESI-SSESEYFSVPGLPD----K 97 (398)
Q Consensus 23 ~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pg~~~----~ 97 (398)
.+.+++ .++|++|+|.+.+|+..+|+.++||.+.+.++.... ...... +.|..++++|.... .
T Consensus 112 ~~~l~~--~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~----------~~~~~~~g~p~~psyvP~~~s~~~~~ 179 (500)
T PF00201_consen 112 MEQLKS--EKFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMY----------DLSSFSGGVPSPPSYVPSMFSDFSDR 179 (500)
T ss_dssp TTHHHH--HHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCS----------CCTCCTSCCCTSTTSTTCBCCCSGTT
T ss_pred HHHHHh--hccccceEeeccchhHHHHHHhcCCeEEEecccccc----------hhhhhccCCCCChHHhccccccCCCc
Confidence 334444 689999999999999999999999998643321110 011112 34555666665432 2
Q ss_pred cccccccccccCCcchHHHH-HH------------------HHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecC
Q 037640 98 IELTKKQVDSTQGQKFKAFE-YK------------------IGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIG 158 (398)
Q Consensus 98 ~~~~~~~l~~~~~~~~~~~~-~~------------------~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vG 158 (398)
+++..+-..++.. -..... .. ..+...+...+++|+...++ ++++++|++++||
T Consensus 180 msf~~Ri~N~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld------~prp~~p~v~~vG 252 (500)
T PF00201_consen 180 MSFWQRIKNFLFY-LYFRFIFRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLD------FPRPLLPNVVEVG 252 (500)
T ss_dssp SSSST--TTSHHH-HHHHHHHHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE----------HHHHCTSTTGC
T ss_pred cchhhhhhhhhhh-hhhccccccchhhHHHHHhhhcccccccHHHHHHHHHHhhhccccCc------CCcchhhcccccC
Confidence 2211110000000 000000 00 01112233445666666555 2345668999999
Q ss_pred cccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCH-HHHHHHHHHHHhCCCCEEEEEeCCCCch
Q 037640 159 PVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIP-SQMMELGLGLEASNRPFIWVIREGETSK 237 (398)
Q Consensus 159 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~ 237 (398)
+++...+++ .+.+++.|++...+++||||||||+....+ +.+++++++|++.+++|||++++..
T Consensus 253 gl~~~~~~~------------l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~--- 317 (500)
T PF00201_consen 253 GLHIKPAKP------------LPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEP--- 317 (500)
T ss_dssp GC-S----T------------CHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSH---
T ss_pred ccccccccc------------cccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccc---
Confidence 997654433 468899999985567899999999986444 4478899999999999999997632
Q ss_pred hhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhc
Q 037640 238 ELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLK 317 (398)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g 317 (398)
+..+ ++|+.+.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++ ++.|
T Consensus 318 -------~~~l-----~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~-~~~G 384 (500)
T PF00201_consen 318 -------PENL-----PKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARV-EEKG 384 (500)
T ss_dssp -------GCHH-----HTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHH-HHTT
T ss_pred -------cccc-----cceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEE-EEEe
Confidence 1111 36899999999999999999999999999999999999999999999999999999999 5999
Q ss_pred ceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Q 037640 318 IGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMA 376 (398)
Q Consensus 318 ~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~ 376 (398)
+|+.++.. ++++++|.++|+++|+|+ +|++||+++++++++.
T Consensus 385 ~g~~l~~~-------------~~~~~~l~~ai~~vl~~~----~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 385 VGVVLDKN-------------DLTEEELRAAIREVLENP----SYKENAKRLSSLFRDR 426 (500)
T ss_dssp SEEEEGGG-------------C-SHHHHHHHHHHHHHSH----HHHHHHHHHHHTTT--
T ss_pred eEEEEEec-------------CCcHHHHHHHHHHHHhhh----HHHHHHHHHHHHHhcC
Confidence 99999976 699999999999999988 9999999999999864
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=3.1e-35 Score=297.55 Aligned_cols=203 Identities=32% Similarity=0.548 Sum_probs=157.9
Q ss_pred hhhccHHHHHHH-HhhcCCceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCC--ceEEEeeCCcc---cCC
Q 037640 135 FEELEPAYVKEY-KKISRDKAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPK--SVVYACLGSMC---NLI 208 (398)
Q Consensus 135 ~~~le~~~~~~~-~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~vv~vs~Gs~~---~~~ 208 (398)
+..+++.....+ .+...+++++|||+........ .....+|++..+.. +||||||||+. .++
T Consensus 227 ~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~~~------------~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp 294 (496)
T KOG1192|consen 227 FIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSKQK------------SPLPLEWLDILDESRHSVVYISFGSMVNSADLP 294 (496)
T ss_pred EEEEccCcccCCCCCCCCCCceEECcEEecCcccc------------ccccHHHHHHHhhccCCeEEEECCcccccccCC
Confidence 444444333334 3345689999999987632210 11456677766654 89999999999 799
Q ss_pred HHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhh-hcCCCcceeeecCCchhH
Q 037640 209 PSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLI-LSHPSVGGFLTHCGWNST 286 (398)
Q Consensus 209 ~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~-L~~~~~~~~ithgG~~s~ 286 (398)
.++..+++.+|+.. +++|||+++...... +++++.++ ...||+..+|+||.++ |+|+++++||||||||||
T Consensus 295 ~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~------~~~~~~~~-~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt 367 (496)
T KOG1192|consen 295 EEQKKELAKALESLQGVTFLWKYRPDDSIY------FPEGLPNR-GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNST 367 (496)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecCCcchh------hhhcCCCC-CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHH
Confidence 99999999999999 889999998753210 12222221 2468888899999998 599999999999999999
Q ss_pred HHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHH
Q 037640 287 LEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRA 366 (398)
Q Consensus 287 ~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a 366 (398)
+|++++|||||++|+++||+.||++++ +.|.|..+... +++...+..++.++++++ +|++++
T Consensus 368 ~E~~~~GvP~v~~Plf~DQ~~Na~~i~-~~g~~~v~~~~-------------~~~~~~~~~~~~~il~~~----~y~~~~ 429 (496)
T KOG1192|consen 368 LESIYSGVPMVCVPLFGDQPLNARLLV-RHGGGGVLDKR-------------DLVSEELLEAIKEILENE----EYKEAA 429 (496)
T ss_pred HHHHhcCCceecCCccccchhHHHHHH-hCCCEEEEehh-------------hcCcHHHHHHHHHHHcCh----HHHHHH
Confidence 999999999999999999999999996 66666555554 356656999999999988 999999
Q ss_pred HHHHHHHH
Q 037640 367 LNLAKMAK 374 (398)
Q Consensus 367 ~~l~~~~~ 374 (398)
+++++..+
T Consensus 430 ~~l~~~~~ 437 (496)
T KOG1192|consen 430 KRLSEILR 437 (496)
T ss_pred HHHHHHHH
Confidence 99999876
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=1e-32 Score=271.04 Aligned_cols=300 Identities=19% Similarity=0.224 Sum_probs=201.7
Q ss_pred HhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCccccCCCC
Q 037640 16 DKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEYFSVPGLP 95 (398)
Q Consensus 16 ~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~ 95 (398)
..+.+.+...+++ .+||+||+|.+++++..+|+++|||+|.+++...... .++ ...|.+.
T Consensus 78 ~~~~~~l~~~~~~--~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~----~~~--------------~~~~~~~ 137 (392)
T TIGR01426 78 EDVLPQLEEAYKG--DRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANE----EFE--------------EMVSPAG 137 (392)
T ss_pred HHHHHHHHHHhcC--CCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccc----ccc--------------ccccccc
Confidence 3344556666666 7999999999989999999999999998754321110 000 0000000
Q ss_pred cccccccccccccCCcchHHHHHHHHhhh------------ccCcEEEEcChhhccHHHHHHHHhhcCCceeecCcccCC
Q 037640 96 DKIELTKKQVDSTQGQKFKAFEYKIGAAT------------LAIDGVIINSFEELEPAYVKEYKKISRDKAWCIGPVSLS 163 (398)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------------~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~ 163 (398)
............ ....+...++++.... ......+..+. +.+.+....+++++++|||+...
T Consensus 138 ~~~~~~~~~~~~-~~~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~-----~~l~~~~~~~~~~~~~~Gp~~~~ 211 (392)
T TIGR01426 138 EGSAEEGAIAER-GLAEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTP-----KAFQPAGETFDDSFTFVGPCIGD 211 (392)
T ss_pred hhhhhhhccccc-hhHHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCC-----hHhCCCccccCCCeEEECCCCCC
Confidence 000000000000 0000001111111100 01111223332 23333345678899999998753
Q ss_pred CcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhcc
Q 037640 164 NKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWV 243 (398)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~ 243 (398)
.. +...|....+++++|||||||+.....+.+.++++++.+.+.++||..+.......
T Consensus 212 ~~-----------------~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~----- 269 (392)
T TIGR01426 212 RK-----------------EDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPAD----- 269 (392)
T ss_pred cc-----------------ccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChhH-----
Confidence 21 12236665566789999999987777777888999999999999999876532111
Q ss_pred CchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEec
Q 037640 244 VEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIG 323 (398)
Q Consensus 244 l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~ 323 (398)
+ +..+.|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||+++ +++|+|+.+.
T Consensus 270 ----~--~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l-~~~g~g~~l~ 340 (392)
T TIGR01426 270 ----L--GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRI-AELGLGRHLP 340 (392)
T ss_pred ----h--ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHH-HHCCCEEEec
Confidence 1 012478999999999999999887 999999999999999999999999999999999999 5999999987
Q ss_pred cCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 037640 324 VENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDI 394 (398)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (398)
.. ++++++|.++|+++++|+ +|+++++++++.++.. +|. ....++|..+
T Consensus 341 ~~-------------~~~~~~l~~ai~~~l~~~----~~~~~~~~l~~~~~~~---~~~--~~aa~~i~~~ 389 (392)
T TIGR01426 341 PE-------------EVTAEKLREAVLAVLSDP----RYAERLRKMRAEIREA---GGA--RRAADEIEGF 389 (392)
T ss_pred cc-------------cCCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHHc---CCH--HHHHHHHHHh
Confidence 65 589999999999999987 8999999999998854 554 3444444443
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.97 E-value=2.9e-30 Score=254.40 Aligned_cols=159 Identities=21% Similarity=0.234 Sum_probs=132.4
Q ss_pred hhhhhhhhcCCCCCceEEEeeCCcccCCH-HHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEE
Q 037640 181 EHKCLKWLDSKDPKSVVYACLGSMCNLIP-SQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVI 259 (398)
Q Consensus 181 ~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~ 259 (398)
+.++..|++. ++++|||+|||+..... .....++++++..+.++||+.+...... ...++|+.+
T Consensus 228 ~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~-------------~~~~~~v~~ 292 (401)
T cd03784 228 PPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGA-------------EDLPDNVRV 292 (401)
T ss_pred CHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccc-------------cCCCCceEE
Confidence 4677888875 35699999999987555 4556799999999999999998653210 012479999
Q ss_pred eecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCcccccccccc
Q 037640 260 WDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVL 339 (398)
Q Consensus 260 ~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~ 339 (398)
.+|+||.++|.|+++ ||||||+||++||+++|||+|++|+..||+.||+++ ++.|+|+.+... .
T Consensus 293 ~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~-~~~G~g~~l~~~-------------~ 356 (401)
T cd03784 293 VDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARV-AELGAGPALDPR-------------E 356 (401)
T ss_pred eCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHH-HHCCCCCCCCcc-------------c
Confidence 999999999999887 999999999999999999999999999999999999 599999999765 4
Q ss_pred ccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHH
Q 037640 340 VKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKM 375 (398)
Q Consensus 340 ~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 375 (398)
+++++|.++|++++++ .++++++++++.++.
T Consensus 357 ~~~~~l~~al~~~l~~-----~~~~~~~~~~~~~~~ 387 (401)
T cd03784 357 LTAERLAAALRRLLDP-----PSRRRAAALLRRIRE 387 (401)
T ss_pred CCHHHHHHHHHHHhCH-----HHHHHHHHHHHHHHh
Confidence 8999999999999984 556667777776653
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.96 E-value=4.6e-29 Score=243.91 Aligned_cols=165 Identities=24% Similarity=0.329 Sum_probs=143.9
Q ss_pred CCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcC
Q 037640 192 DPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSH 271 (398)
Q Consensus 192 ~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~ 271 (398)
.++++||+|+||.... .+.+..++++++..+.+||...+. ... ...+ + +.|+++.+|+||..+|.+
T Consensus 235 ~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~-~~~-~~~~--~---------p~n~~v~~~~p~~~~l~~ 300 (406)
T COG1819 235 ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGG-ARD-TLVN--V---------PDNVIVADYVPQLELLPR 300 (406)
T ss_pred CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccc-ccc-cccc--C---------CCceEEecCCCHHHHhhh
Confidence 3567999999999987 778889999999999999999876 211 1111 3 479999999999999999
Q ss_pred CCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHH
Q 037640 272 PSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVER 351 (398)
Q Consensus 272 ~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~ 351 (398)
+++ ||||||+|||+|||++|||+|++|...||+.||.++ ++.|+|..+..+ .++++.|+++|++
T Consensus 301 ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv-e~~G~G~~l~~~-------------~l~~~~l~~av~~ 364 (406)
T COG1819 301 ADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV-EELGAGIALPFE-------------ELTEERLRAAVNE 364 (406)
T ss_pred cCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH-HHcCCceecCcc-------------cCCHHHHHHHHHH
Confidence 999 999999999999999999999999999999999999 699999999886 5899999999999
Q ss_pred HhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 352 LMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 352 vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
+|+|+ +|+++++++++.++.. +| .+.+.+.|++..
T Consensus 365 vL~~~----~~~~~~~~~~~~~~~~---~g--~~~~a~~le~~~ 399 (406)
T COG1819 365 VLADD----SYRRAAERLAEEFKEE---DG--PAKAADLLEEFA 399 (406)
T ss_pred HhcCH----HHHHHHHHHHHHhhhc---cc--HHHHHHHHHHHH
Confidence 99988 9999999999999876 55 366666666644
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.76 E-value=5e-17 Score=155.14 Aligned_cols=230 Identities=17% Similarity=0.194 Sum_probs=149.9
Q ss_pred hchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCccccCCCCc
Q 037640 17 KLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEYFSVPGLPD 96 (398)
Q Consensus 17 ~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ 96 (398)
.....+.+++++ .+||+||+|. .+.+..+|+..|||++.+........ .....+ .
T Consensus 81 ~~~~~~~~~l~~--~~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~~~-------------------~~~~~~---~ 135 (318)
T PF13528_consen 81 RRIRREIRWLRE--FRPDLVISDF-YPLAALAARRAGIPVIVISNQYWFLH-------------------PNFWLP---W 135 (318)
T ss_pred HHHHHHHHHHHh--cCCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHccc-------------------ccCCcc---h
Confidence 344555667777 8999999994 45567889999999998766532210 000000 0
Q ss_pred ccccccccccccCCcchHHHHHHHHh-h-hccCcEEEEcChhhccHHHHHHHHhhcCCceeecCcccCCCcccchhhccC
Q 037640 97 KIELTKKQVDSTQGQKFKAFEYKIGA-A-TLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIGPVSLSNKEYSDKAQRG 174 (398)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~~~~~~~~~-~-~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~ 174 (398)
...+..+..++.. . ...+...+.-++. .. .....++.++||+.......
T Consensus 136 -------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~--------~~~~~~~~~~~p~~~~~~~~------- 186 (318)
T PF13528_consen 136 -------------DQDFGRLIERYIDRYHFPPADRRLALSFY-PP--------LPPFFRVPFVGPIIRPEIRE------- 186 (318)
T ss_pred -------------hhhHHHHHHHhhhhccCCcccceecCCcc-cc--------ccccccccccCchhcccccc-------
Confidence 0012222222221 1 2333333433333 11 01113466788886432211
Q ss_pred CCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCC-CCEEEEEeCCCCchhhhhccCchhHHHHhc
Q 037640 175 NTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASN-RPFIWVIREGETSKELKKWVVEDGFEERIK 253 (398)
Q Consensus 175 ~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~ 253 (398)
... .+++.|+|+||..... .++++++..+ +++++. +.... -+ .
T Consensus 187 ------------~~~--~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~--------~~-------~ 230 (318)
T PF13528_consen 187 ------------LPP--EDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAA--------DP-------R 230 (318)
T ss_pred ------------cCC--CCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCcc--------cc-------c
Confidence 001 1344799999988754 6667777765 666665 54421 11 2
Q ss_pred CCCeEEeecC--chhhhhcCCCcceeeecCCchhHHHHHHhCCCEeeccc--ccchhhhHHHHHHHhcceEEeccCCCCC
Q 037640 254 GRGLVIWDWA--PQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPL--FADQFTNEKLAVHLLKIGVKIGVENPMT 329 (398)
Q Consensus 254 ~~~v~~~~~~--pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 329 (398)
.+|+.+.+|. .-.++|+.+++ +|||||+||++|+++.|+|+|++|. +.+|..||+++ +++|+|+.++.+
T Consensus 231 ~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l-~~~G~~~~~~~~---- 303 (318)
T PF13528_consen 231 PGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKL-EELGLGIVLSQE---- 303 (318)
T ss_pred CCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH-HHCCCeEEcccc----
Confidence 5799998876 34468988887 9999999999999999999999999 67999999999 699999999765
Q ss_pred ccccccccccccHHHHHHHHHHH
Q 037640 330 WGEEQNIGVLVKRDDVKNAVERL 352 (398)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~ai~~v 352 (398)
+++++.|+++|+++
T Consensus 304 ---------~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 304 ---------DLTPERLAEFLERL 317 (318)
T ss_pred ---------cCCHHHHHHHHhcC
Confidence 69999999999764
No 29
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.71 E-value=6e-16 Score=149.43 Aligned_cols=137 Identities=19% Similarity=0.207 Sum_probs=105.4
Q ss_pred CCCCceEEEeeCCcccCCHHH-HHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecC-chh-h
Q 037640 191 KDPKSVVYACLGSMCNLIPSQ-MMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWA-PQV-L 267 (398)
Q Consensus 191 ~~~~~vv~vs~Gs~~~~~~~~-~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~-pq~-~ 267 (398)
.+++++|+|..||++....++ +.+++..+.. +.+++|.+|.+. +.+.. .. ..++.+.+|+ ++. +
T Consensus 182 ~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~---------~~~~~-~~--~~~~~~~~f~~~~m~~ 248 (352)
T PRK12446 182 SRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN---------LDDSL-QN--KEGYRQFEYVHGELPD 248 (352)
T ss_pred CCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch---------HHHHH-hh--cCCcEEecchhhhHHH
Confidence 345679999999999866543 3445555532 488999998653 11111 11 1355566787 434 6
Q ss_pred hhcCCCcceeeecCCchhHHHHHHhCCCEeecccc-----cchhhhHHHHHHHhcceEEeccCCCCCccccccccccccH
Q 037640 268 ILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLF-----ADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKR 342 (398)
Q Consensus 268 ~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~-----~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~ 342 (398)
+++++++ +|||||.+|+.|++++|+|+|.+|+. .||..||+.++ +.|+|..+... ++++
T Consensus 249 ~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~-~~g~~~~l~~~-------------~~~~ 312 (352)
T PRK12446 249 ILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFE-RQGYASVLYEE-------------DVTV 312 (352)
T ss_pred HHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHH-HCCCEEEcchh-------------cCCH
Confidence 8999998 99999999999999999999999985 48999999995 99999999765 5899
Q ss_pred HHHHHHHHHHhccC
Q 037640 343 DDVKNAVERLMDEG 356 (398)
Q Consensus 343 ~~l~~ai~~vl~~~ 356 (398)
+.|.+++.+++.|+
T Consensus 313 ~~l~~~l~~ll~~~ 326 (352)
T PRK12446 313 NSLIKHVEELSHNN 326 (352)
T ss_pred HHHHHHHHHHHcCH
Confidence 99999999999764
No 30
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.65 E-value=1.1e-14 Score=139.64 Aligned_cols=150 Identities=14% Similarity=0.156 Sum_probs=115.6
Q ss_pred CCceEEEeeCCcccCCHHHH-HHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCC-eEEeecCchh-hhh
Q 037640 193 PKSVVYACLGSMCNLIPSQM-MELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRG-LVIWDWAPQV-LIL 269 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~-~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-v~~~~~~pq~-~~L 269 (398)
++.+|+|..||++....+++ .+++..+.+ +..+++..|.+.. +.........| +.+.+|.+++ +++
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~~----------~~~~~~~~~~~~~~v~~f~~dm~~~~ 250 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKNDL----------EELKSAYNELGVVRVLPFIDDMAALL 250 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcchH----------HHHHHHHhhcCcEEEeeHHhhHHHHH
Confidence 46699999999998654433 345555544 6788888877631 22223333344 7888999887 488
Q ss_pred cCCCcceeeecCCchhHHHHHHhCCCEeecccc----cchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHH
Q 037640 270 SHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLF----ADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDV 345 (398)
Q Consensus 270 ~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l 345 (398)
+.+++ +||+.|.+|+.|+++.|+|+|.+|+. .||..||+.+ ++.|+|..++.. +++.+++
T Consensus 251 ~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l-~~~gaa~~i~~~-------------~lt~~~l 314 (357)
T COG0707 251 AAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFL-EKAGAALVIRQS-------------ELTPEKL 314 (357)
T ss_pred HhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHH-HhCCCEEEeccc-------------cCCHHHH
Confidence 88888 99999999999999999999999984 3899999999 599999999876 6899999
Q ss_pred HHHHHHHhccCcchHHHHHHHHHH
Q 037640 346 KNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 346 ~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
.+.|.+++.+++..+.|+++++.+
T Consensus 315 ~~~i~~l~~~~~~l~~m~~~a~~~ 338 (357)
T COG0707 315 AELILRLLSNPEKLKAMAENAKKL 338 (357)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhc
Confidence 999999998875555555555544
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.63 E-value=2.7e-14 Score=136.52 Aligned_cols=123 Identities=15% Similarity=0.186 Sum_probs=88.5
Q ss_pred CceEEEeeCCcccCCHHHHHHHHHHHHhCCC-CEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCc--hhhhhc
Q 037640 194 KSVVYACLGSMCNLIPSQMMELGLGLEASNR-PFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAP--QVLILS 270 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~p--q~~~L~ 270 (398)
++.|+|.+|+... ..+++++++.+. .+|+ +.... ..+. ...|+.+.+|.| ..+.|.
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~~~~i~--~~~~~--------~~~~-----~~~~v~~~~~~~~~~~~~l~ 246 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIANVKFVC--YSYEV--------AKNS-----YNENVEIRRITTDNFKELIK 246 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCCeEEEE--eCCCC--------Cccc-----cCCCEEEEECChHHHHHHHH
Confidence 3468888888542 355677776653 4442 22211 1111 136888889997 335666
Q ss_pred CCCcceeeecCCchhHHHHHHhCCCEeeccccc--chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHH
Q 037640 271 HPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFA--DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNA 348 (398)
Q Consensus 271 ~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~a 348 (398)
.+++ +|||||++|++|++++|+|++++|..+ ||..||+.+ ++.|+|+.++.. ++ ++.++
T Consensus 247 ~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l-~~~g~~~~l~~~-------------~~---~~~~~ 307 (321)
T TIGR00661 247 NAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKL-EDLGCGIALEYK-------------EL---RLLEA 307 (321)
T ss_pred hCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHH-HHCCCEEEcChh-------------hH---HHHHH
Confidence 6666 999999999999999999999999965 899999999 599999998765 33 66667
Q ss_pred HHHHhccC
Q 037640 349 VERLMDEG 356 (398)
Q Consensus 349 i~~vl~~~ 356 (398)
+.++++|+
T Consensus 308 ~~~~~~~~ 315 (321)
T TIGR00661 308 ILDIRNMK 315 (321)
T ss_pred HHhccccc
Confidence 77777766
No 32
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.49 E-value=1.5e-15 Score=131.24 Aligned_cols=135 Identities=13% Similarity=0.213 Sum_probs=98.0
Q ss_pred eEEEeeCCcccCCHHH-HHHHHHHHHh--CCCCEEEEEeCCCCchhhhhccCchhHHHHhc--CCCeEEeecCc-hhhhh
Q 037640 196 VVYACLGSMCNLIPSQ-MMELGLGLEA--SNRPFIWVIREGETSKELKKWVVEDGFEERIK--GRGLVIWDWAP-QVLIL 269 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~-~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~v~~~~~~p-q~~~L 269 (398)
+|+|+.||........ +..+...+.. ...+|++.+|...... .. .... ..++.+.+|.+ ..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~------~~----~~~~~~~~~v~~~~~~~~m~~~m 70 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEE------LK----IKVENFNPNVKVFGFVDNMAELM 70 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHH------HC----CCHCCTTCCCEEECSSSSHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHH------HH----HHHhccCCcEEEEechhhHHHHH
Confidence 5899999888642222 2234444433 3588999998763211 11 0111 26899999999 56799
Q ss_pred cCCCcceeeecCCchhHHHHHHhCCCEeeccccc----chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHH
Q 037640 270 SHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFA----DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDV 345 (398)
Q Consensus 270 ~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~----DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l 345 (398)
+.+++ +|||||.+|++|++++|+|+|++|... +|..||..++ +.|+|..+... ..+.++|
T Consensus 71 ~~aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~-~~g~~~~~~~~-------------~~~~~~L 134 (167)
T PF04101_consen 71 AAADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELA-KKGAAIMLDES-------------ELNPEEL 134 (167)
T ss_dssp HHHSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHH-HCCCCCCSECC-------------C-SCCCH
T ss_pred HHcCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHH-HcCCccccCcc-------------cCCHHHH
Confidence 99998 999999999999999999999999988 9999999995 99999998765 4678999
Q ss_pred HHHHHHHhccC
Q 037640 346 KNAVERLMDEG 356 (398)
Q Consensus 346 ~~ai~~vl~~~ 356 (398)
.++|.+++.++
T Consensus 135 ~~~i~~l~~~~ 145 (167)
T PF04101_consen 135 AEAIEELLSDP 145 (167)
T ss_dssp HHHHHCHCCCH
T ss_pred HHHHHHHHcCc
Confidence 99999999865
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.47 E-value=5.3e-12 Score=122.45 Aligned_cols=145 Identities=15% Similarity=0.143 Sum_probs=100.0
Q ss_pred CCceEEEeeCCcccCCHHHHH-HHHHHHHhCCC--CEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCc-hhh
Q 037640 193 PKSVVYACLGSMCNLIPSQMM-ELGLGLEASNR--PFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAP-QVL 267 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~-~~~~al~~~~~--~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~p-q~~ 267 (398)
+..+|++..|+... ..+. .+.+++.+... .++|.+|.... +.+.+... +-++.+.+|+. ..+
T Consensus 182 ~~~~i~~~gg~~~~---~~~~~~l~~a~~~~~~~~~~~~~~G~g~~----------~~~~~~~~~~~~v~~~g~~~~~~~ 248 (357)
T PRK00726 182 GKPTLLVVGGSQGA---RVLNEAVPEALALLPEALQVIHQTGKGDL----------EEVRAAYAAGINAEVVPFIDDMAA 248 (357)
T ss_pred CCeEEEEECCcHhH---HHHHHHHHHHHHHhhhCcEEEEEcCCCcH----------HHHHHHhhcCCcEEEeehHhhHHH
Confidence 34466665555432 2222 23355554332 45566665532 12222222 22377888984 457
Q ss_pred hhcCCCcceeeecCCchhHHHHHHhCCCEeeccc----ccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 268 ILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPL----FADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 268 ~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
+++.+++ +|+|+|.++++||+++|+|+|++|. .++|..|+..+. +.|.|..+..+ +++++
T Consensus 249 ~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~-~~~~g~~~~~~-------------~~~~~ 312 (357)
T PRK00726 249 AYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALV-DAGAALLIPQS-------------DLTPE 312 (357)
T ss_pred HHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHH-HCCCEEEEEcc-------------cCCHH
Confidence 8988888 9999999999999999999999997 368999999995 99999999765 47899
Q ss_pred HHHHHHHHHhccCcchHHHHHHH
Q 037640 344 DVKNAVERLMDEGNDGEERRNRA 366 (398)
Q Consensus 344 ~l~~ai~~vl~~~~~~~~~~~~a 366 (398)
.|.++|.++++|++..+++++++
T Consensus 313 ~l~~~i~~ll~~~~~~~~~~~~~ 335 (357)
T PRK00726 313 KLAEKLLELLSDPERLEAMAEAA 335 (357)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999874444444443
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.45 E-value=1.1e-11 Score=119.61 Aligned_cols=149 Identities=16% Similarity=0.149 Sum_probs=102.1
Q ss_pred CCceEEEeeCCcccCCH-HHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhc--CCCeEEeecC-chhhh
Q 037640 193 PKSVVYACLGSMCNLIP-SQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIK--GRGLVIWDWA-PQVLI 268 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~v~~~~~~-pq~~~ 268 (398)
++.+|++..|+...... +.+.+++..+.+.+..+++.+|... . +.+.+... ..|+.+.+|+ +...+
T Consensus 180 ~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~-~---------~~l~~~~~~~~~~v~~~g~~~~~~~~ 249 (350)
T cd03785 180 GKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD-L---------EEVKKAYEELGVNYEVFPFIDDMAAA 249 (350)
T ss_pred CCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc-H---------HHHHHHHhccCCCeEEeehhhhHHHH
Confidence 34466666666543221 1222344444433455666776552 1 12222221 3689999998 44568
Q ss_pred hcCCCcceeeecCCchhHHHHHHhCCCEeeccc----ccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHH
Q 037640 269 LSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPL----FADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDD 344 (398)
Q Consensus 269 L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
|+.+++ +|+|+|.++++||+++|+|+|+.|. ..+|..|+..+. +.|.|..+... +.+.++
T Consensus 250 l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~-~~g~g~~v~~~-------------~~~~~~ 313 (350)
T cd03785 250 YAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALV-KAGAAVLIPQE-------------ELTPER 313 (350)
T ss_pred HHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHH-hCCCEEEEecC-------------CCCHHH
Confidence 888887 9999999999999999999999986 357899999995 88999998753 368999
Q ss_pred HHHHHHHHhccCcchHHHHHHHH
Q 037640 345 VKNAVERLMDEGNDGEERRNRAL 367 (398)
Q Consensus 345 l~~ai~~vl~~~~~~~~~~~~a~ 367 (398)
+.++|+++++|++..+.++++++
T Consensus 314 l~~~i~~ll~~~~~~~~~~~~~~ 336 (350)
T cd03785 314 LAAALLELLSDPERLKAMAEAAR 336 (350)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHH
Confidence 99999999987744444544443
No 35
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.36 E-value=3.7e-11 Score=118.09 Aligned_cols=148 Identities=9% Similarity=0.144 Sum_probs=105.3
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHH-h-CCCCEEEEEeCCCCchhhhhccCchhHHHHh-cCCCeEEeecCchh-hh
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLE-A-SNRPFIWVIREGETSKELKKWVVEDGFEERI-KGRGLVIWDWAPQV-LI 268 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~-~-~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~pq~-~~ 268 (398)
++++|+++.|+.... ..+..+++++. . .+.++++..|.+.. +-+.+.+.. ...++.+.+|.++. ++
T Consensus 201 ~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~~~--------l~~~l~~~~~~~~~v~~~G~~~~~~~~ 270 (391)
T PRK13608 201 DKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKSKE--------LKRSLTAKFKSNENVLILGYTKHMNEW 270 (391)
T ss_pred CCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCCHH--------HHHHHHHHhccCCCeEEEeccchHHHH
Confidence 455888888888732 23444555533 2 34677676654421 112222222 23578888999766 58
Q ss_pred hcCCCcceeeecCCchhHHHHHHhCCCEeec-ccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHH
Q 037640 269 LSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW-PLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKN 347 (398)
Q Consensus 269 L~~~~~~~~ithgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 347 (398)
++.+++ ||+..|..|+.||+++|+|+|+. |..++|..|+..+ ++.|+|+.. -+.+++.+
T Consensus 271 ~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~-~~~G~g~~~-----------------~~~~~l~~ 330 (391)
T PRK13608 271 MASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYF-EEKGFGKIA-----------------DTPEEAIK 330 (391)
T ss_pred HHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHH-HhCCcEEEe-----------------CCHHHHHH
Confidence 888888 99998888999999999999998 7777788999999 599999864 26788999
Q ss_pred HHHHHhccCcchHHHHHHHHHHH
Q 037640 348 AVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 348 ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
+|.++++|++..+.+++|++++.
T Consensus 331 ~i~~ll~~~~~~~~m~~~~~~~~ 353 (391)
T PRK13608 331 IVASLTNGNEQLTNMISTMEQDK 353 (391)
T ss_pred HHHHHhcCHHHHHHHHHHHHHhc
Confidence 99999988766666666666543
No 36
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.32 E-value=5.3e-10 Score=109.42 Aligned_cols=146 Identities=16% Similarity=0.222 Sum_probs=103.2
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhc--CCCeEEeecCchh-hh
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIK--GRGLVIWDWAPQV-LI 268 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~v~~~~~~pq~-~~ 268 (398)
++.+|++..|+.... ..+..+++++.+. +.++++..+.+.. +-+.+.+... ..|+.+.+|+++. ++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~--------~~~~l~~~~~~~~~~v~~~g~~~~~~~l 270 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEA--------LKQSLEDLQETNPDALKVFGYVENIDEL 270 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHH--------HHHHHHHHHhcCCCcEEEEechhhHHHH
Confidence 445777777887643 2345677777654 5677776654321 1122222211 3579999999875 68
Q ss_pred hcCCCcceeeecCCchhHHHHHHhCCCEeec-ccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHH
Q 037640 269 LSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW-PLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKN 347 (398)
Q Consensus 269 L~~~~~~~~ithgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 347 (398)
++.+++ +|+..|..++.||+++|+|+|+. |..+.+..|+..+ ++.|+|+.. -+.+++.+
T Consensus 271 ~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~-~~~G~~~~~-----------------~~~~~l~~ 330 (380)
T PRK13609 271 FRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYF-ERKGAAVVI-----------------RDDEEVFA 330 (380)
T ss_pred HHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHH-HhCCcEEEE-----------------CCHHHHHH
Confidence 988888 99999988999999999999995 6777788999888 588888754 25689999
Q ss_pred HHHHHhccCcchHHHHHHHHH
Q 037640 348 AVERLMDEGNDGEERRNRALN 368 (398)
Q Consensus 348 ai~~vl~~~~~~~~~~~~a~~ 368 (398)
+|.++++|++..+.+++++++
T Consensus 331 ~i~~ll~~~~~~~~m~~~~~~ 351 (380)
T PRK13609 331 KTEALLQDDMKLLQMKEAMKS 351 (380)
T ss_pred HHHHHHCCHHHHHHHHHHHHH
Confidence 999999887555555554443
No 37
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.28 E-value=3e-10 Score=111.23 Aligned_cols=173 Identities=11% Similarity=0.016 Sum_probs=111.8
Q ss_pred CCCceEEEeeCCcccCCHHHHHHHHHHHHhC-----CCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCch
Q 037640 192 DPKSVVYACLGSMCNLIPSQMMELGLGLEAS-----NRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQ 265 (398)
Q Consensus 192 ~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq 265 (398)
+++++|.+-.||....-......++++++.. +.++++.......... + +.+.+... ...+....+ ..
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~-----~-~~~~~~~~~~~~v~~~~~-~~ 261 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQ-----F-EQIKAEYGPDLQLHLIDG-DA 261 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHH-----H-HHHHHHhCCCCcEEEECc-hH
Confidence 4556888888888763222333455444432 3455554433221111 1 11111111 122333222 33
Q ss_pred hhhhcCCCcceeeecCCchhHHHHHHhCCCEeec----cccc---------chhhhHHHHHHHhcceEEeccCCCCCccc
Q 037640 266 VLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW----PLFA---------DQFTNEKLAVHLLKIGVKIGVENPMTWGE 332 (398)
Q Consensus 266 ~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~----P~~~---------DQ~~na~~v~~~~g~g~~l~~~~~~~~~~ 332 (398)
.++++.+++ +|+-+|..|+ |++++|+|+|++ |+.. .|..|+..++ ..++...+-..
T Consensus 262 ~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~-~~~~~pel~q~------- 330 (385)
T TIGR00215 262 RKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILA-NRLLVPELLQE------- 330 (385)
T ss_pred HHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhc-CCccchhhcCC-------
Confidence 468888887 9999999877 999999999999 8742 2888999995 88888887654
Q ss_pred cccccccccHHHHHHHHHHHhccC----cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 037640 333 EQNIGVLVKRDDVKNAVERLMDEG----NDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQ 392 (398)
Q Consensus 333 ~~~~~~~~~~~~l~~ai~~vl~~~----~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 392 (398)
+++++.|.+++.+++.|+ +..+.+++..+++++.+ .++|.+.+..+.+++
T Consensus 331 ------~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~a~~i~~ 384 (385)
T TIGR00215 331 ------ECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRI----YCNADSERAAQAVLE 384 (385)
T ss_pred ------CCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHhh
Confidence 589999999999999988 77778877777777765 345666666555543
No 38
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.28 E-value=1.8e-09 Score=105.75 Aligned_cols=136 Identities=14% Similarity=0.113 Sum_probs=91.9
Q ss_pred CCCceEEEeeCCcccCCHHHH-HHHHHHHH-----hCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCch
Q 037640 192 DPKSVVYACLGSMCNLIPSQM-MELGLGLE-----ASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQ 265 (398)
Q Consensus 192 ~~~~vv~vs~Gs~~~~~~~~~-~~~~~al~-----~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq 265 (398)
+++++|++..|+........+ ..+...+. ..+.++++..|.+.. +-+.+.+.....++.+.+|+++
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~--------~~~~L~~~~~~~~v~~~G~~~~ 275 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK--------LQSKLESRDWKIPVKVRGFVTN 275 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH--------HHHHHHhhcccCCeEEEecccc
Confidence 345577777776654333332 22322221 134566777765421 1112222212346888899986
Q ss_pred h-hhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchh-hhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 266 V-LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQF-TNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 266 ~-~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
. ++++.+++ +|+.+|-++++||+++|+|+|+.+....|. .|+..+. +.|.|+.+ . +.+
T Consensus 276 ~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~-~~g~g~~~--~---------------~~~ 335 (382)
T PLN02605 276 MEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVV-DNGFGAFS--E---------------SPK 335 (382)
T ss_pred HHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHH-hCCceeec--C---------------CHH
Confidence 6 58888888 999999999999999999999998765564 7998885 88888754 2 788
Q ss_pred HHHHHHHHHhcc
Q 037640 344 DVKNAVERLMDE 355 (398)
Q Consensus 344 ~l~~ai~~vl~~ 355 (398)
+|.++|.+++.|
T Consensus 336 ~la~~i~~ll~~ 347 (382)
T PLN02605 336 EIARIVAEWFGD 347 (382)
T ss_pred HHHHHHHHHHcC
Confidence 999999999987
No 39
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.22 E-value=4.5e-09 Score=103.22 Aligned_cols=134 Identities=16% Similarity=0.099 Sum_probs=90.4
Q ss_pred CceEEEeeCCcccCCHHHHHHHHHHHHh----CCCCEEEEEeCCCCchhhhhccCchhHHHHhc----------------
Q 037640 194 KSVVYACLGSMCNLIPSQMMELGLGLEA----SNRPFIWVIREGETSKELKKWVVEDGFEERIK---------------- 253 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~---------------- 253 (398)
+++|.+--||........+..++++++. .+..|++.+.+.... +.+.+...
T Consensus 205 ~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~---------~~~~~~l~~~g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 205 RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL---------EKLQAILEDLGWQLEGSSEDQTSL 275 (396)
T ss_pred CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH---------HHHHHHHHhcCceecCCccccchh
Confidence 4578888999876333344455555554 356788887443221 11111111
Q ss_pred --CCCeEEeecCch-hhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHh----cceEEeccCC
Q 037640 254 --GRGLVIWDWAPQ-VLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLL----KIGVKIGVEN 326 (398)
Q Consensus 254 --~~~v~~~~~~pq-~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~----g~g~~l~~~~ 326 (398)
.+++.+..+..+ .++++.+++ +|+-.|..| .|+++.|+|+|.+|+...|. |+... ++. |.++.+..
T Consensus 276 ~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~-~~~~~l~g~~~~l~~-- 348 (396)
T TIGR03492 276 FQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFA-EAQSRLLGGSVFLAS-- 348 (396)
T ss_pred hccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHH-HhhHhhcCCEEecCC--
Confidence 123555555544 468888888 999999766 99999999999999888887 98777 353 66666643
Q ss_pred CCCccccccccccccHHHHHHHHHHHhccC
Q 037640 327 PMTWGEEQNIGVLVKRDDVKNAVERLMDEG 356 (398)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 356 (398)
.+.+.|.+++.+++.|+
T Consensus 349 -------------~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 349 -------------KNPEQAAQVVRQLLADP 365 (396)
T ss_pred -------------CCHHHHHHHHHHHHcCH
Confidence 35589999999999876
No 40
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.18 E-value=2.6e-09 Score=103.04 Aligned_cols=87 Identities=20% Similarity=0.249 Sum_probs=70.3
Q ss_pred chhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccc---cchhhhHHHHHHHhcceEEeccCCCCCccccccccccc
Q 037640 264 PQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLF---ADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLV 340 (398)
Q Consensus 264 pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~ 340 (398)
+-.++|+.+++ +|+++|.++++||+++|+|+|+.|.. .+|..|+..+ +..+.|..+... +.
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i-~~~~~G~~~~~~-------------~~ 306 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFL-EDLGAGLVIRQK-------------EL 306 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHH-HHCCCEEEEecc-------------cC
Confidence 45578888888 99999988999999999999999863 4788899889 489999988654 46
Q ss_pred cHHHHHHHHHHHhccCcchHHHHHHH
Q 037640 341 KRDDVKNAVERLMDEGNDGEERRNRA 366 (398)
Q Consensus 341 ~~~~l~~ai~~vl~~~~~~~~~~~~a 366 (398)
+.++|.++|+++++|++..+.+.+++
T Consensus 307 ~~~~l~~~i~~ll~~~~~~~~~~~~~ 332 (348)
T TIGR01133 307 LPEKLLEALLKLLLDPANLEAMAEAA 332 (348)
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 79999999999998874444444444
No 41
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.13 E-value=3.9e-09 Score=103.21 Aligned_cols=106 Identities=11% Similarity=0.047 Sum_probs=68.5
Q ss_pred hhhhcCCCcceeeecCCchhHHHHHHhCCCEeeccccc--------chhhh-----HHHHHHHhcceEEeccCCCCCccc
Q 037640 266 VLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFA--------DQFTN-----EKLAVHLLKIGVKIGVENPMTWGE 332 (398)
Q Consensus 266 ~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~--------DQ~~n-----a~~v~~~~g~g~~l~~~~~~~~~~ 332 (398)
..+++.+++ +|+.+|.+++ |++++|+|+|..|-.. +|..| +..+ ...+++..+...
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~------- 324 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL-AGRELVPELLQE------- 324 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh-cCCCcchhhcCC-------
Confidence 467888888 9999998777 9999999999985432 22222 1222 122222223222
Q ss_pred cccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 037640 333 EQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQD 393 (398)
Q Consensus 333 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 393 (398)
..++++|.+++.++++|++..++++++++++.+.+ ..|++.+.++.+.+.
T Consensus 325 ------~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~-----~~~a~~~~~~~i~~~ 374 (380)
T PRK00025 325 ------EATPEKLARALLPLLADGARRQALLEGFTELHQQL-----RCGADERAAQAVLEL 374 (380)
T ss_pred ------CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHH
Confidence 47899999999999999966667777766665553 244555555554443
No 42
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.03 E-value=5.4e-09 Score=97.84 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=78.3
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHHh--CCCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCchh-hhhc
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLEA--SNRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQV-LILS 270 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq~-~~L~ 270 (398)
+.|+|+||...... ....+++++.+ .+.++.+++|.... ..+.+.+... ..|+.+..++++. ++|+
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~--------~~~~l~~~~~~~~~i~~~~~~~~m~~lm~ 240 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP--------NLDELKKFAKEYPNIILFIDVENMAELMN 240 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc--------CHHHHHHHHHhCCCEEEEeCHHHHHHHHH
Confidence 46899998665533 33456666665 35678888876532 2223333222 4689999999987 7999
Q ss_pred CCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHH
Q 037640 271 HPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKL 311 (398)
Q Consensus 271 ~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~ 311 (398)
.+++ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 241 ~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 241 EADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 9998 999999 9999999999999999999999999974
No 43
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.82 E-value=6e-07 Score=83.42 Aligned_cols=133 Identities=13% Similarity=0.166 Sum_probs=102.0
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHHh-CCCC--EEEEEeCCCCchhhhhccCchhHHHHh-----cCCCeEEeecCchh
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLEA-SNRP--FIWVIREGETSKELKKWVVEDGFEERI-----KGRGLVIWDWAPQV 266 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~~-~~~~--~i~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~v~~~~~~pq~ 266 (398)
--|+||-|.... ..+.+...+.|-.- .+.+ -+..+|+. +|+...+++ +.+++.+.+|-.+.
T Consensus 220 ~~Ilvs~GGG~d-G~eLi~~~l~A~~~l~~l~~~~~ivtGP~----------MP~~~r~~l~~~A~~~p~i~I~~f~~~~ 288 (400)
T COG4671 220 FDILVSVGGGAD-GAELIETALAAAQLLAGLNHKWLIVTGPF----------MPEAQRQKLLASAPKRPHISIFEFRNDF 288 (400)
T ss_pred ceEEEecCCChh-hHHHHHHHHHHhhhCCCCCcceEEEeCCC----------CCHHHHHHHHHhcccCCCeEEEEhhhhH
Confidence 368888776543 34455555555543 3444 45555654 776655554 23789999998766
Q ss_pred -hhhcCCCcceeeecCCchhHHHHHHhCCCEeeccccc---chhhhHHHHHHHhcceEEeccCCCCCccccccccccccH
Q 037640 267 -LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFA---DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKR 342 (398)
Q Consensus 267 -~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~---DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~ 342 (398)
.+++-+.. +|+-||+||++|-+.+|+|-+++|... +|-.-|.|+ +++|+.-.+..+ .+++
T Consensus 289 ~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl-~~LGL~dvL~pe-------------~lt~ 352 (400)
T COG4671 289 ESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRL-EELGLVDVLLPE-------------NLTP 352 (400)
T ss_pred HHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHH-HhcCcceeeCcc-------------cCCh
Confidence 58877777 999999999999999999999999863 999999999 599999888765 6899
Q ss_pred HHHHHHHHHHhc
Q 037640 343 DDVKNAVERLMD 354 (398)
Q Consensus 343 ~~l~~ai~~vl~ 354 (398)
+.++++|...++
T Consensus 353 ~~La~al~~~l~ 364 (400)
T COG4671 353 QNLADALKAALA 364 (400)
T ss_pred HHHHHHHHhccc
Confidence 999999988776
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.78 E-value=7.6e-06 Score=78.39 Aligned_cols=141 Identities=13% Similarity=0.134 Sum_probs=90.7
Q ss_pred eEEEeeCCccc-CCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhh---hhc
Q 037640 196 VVYACLGSMCN-LIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVL---ILS 270 (398)
Q Consensus 196 vv~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~---~L~ 270 (398)
.+++..|+... ...+.+.+++..+... +..+++ +|.... .+.+. ....|+.+.+|+++.+ +++
T Consensus 198 ~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i-~G~~~~---------~~~~~--~~~~~v~~~g~~~~~~~~~~~~ 265 (364)
T cd03814 198 PVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVI-VGDGPA---------RARLE--ARYPNVHFLGFLDGEELAAAYA 265 (364)
T ss_pred eEEEEEeccccccCHHHHHHHHHHhhhcCCceEEE-EeCCch---------HHHHh--ccCCcEEEEeccCHHHHHHHHH
Confidence 56677777654 2334444444544432 344444 443321 11111 2357899999998765 687
Q ss_pred CCCcceeeecCC----chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHH
Q 037640 271 HPSVGGFLTHCG----WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVK 346 (398)
Q Consensus 271 ~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 346 (398)
.+++ +|..+. .++++||+++|+|+|+.+..+ +...+ +..+.|..+.. -+.+++.
T Consensus 266 ~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i-~~~~~g~~~~~---------------~~~~~l~ 323 (364)
T cd03814 266 SADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV-TDGENGLLVEP---------------GDAEAFA 323 (364)
T ss_pred hCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh-cCCcceEEcCC---------------CCHHHHH
Confidence 7877 776654 378999999999999987553 45555 46688887754 3778899
Q ss_pred HHHHHHhccCcchHHHHHHHHHHH
Q 037640 347 NAVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 347 ~ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
++|.+++.|++..+.+.+++++..
T Consensus 324 ~~i~~l~~~~~~~~~~~~~~~~~~ 347 (364)
T cd03814 324 AALAALLADPELRRRMAARARAEA 347 (364)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHH
Confidence 999999998855555555554443
No 45
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.63 E-value=2e-05 Score=79.41 Aligned_cols=141 Identities=15% Similarity=0.121 Sum_probs=92.1
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhh---hhcC
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVL---ILSH 271 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~---~L~~ 271 (398)
.+++..|+... ...+..++++++.. +.++++ +|... ..+.+.+.....++.+.+|+++.+ +++.
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~i-vG~G~---------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~ 331 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLAF-VGDGP---------YREELEKMFAGTPTVFTGMLQGDELSQAYAS 331 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEE-EeCCh---------HHHHHHHHhccCCeEEeccCCHHHHHHHHHH
Confidence 44556677653 23355677777765 455554 44332 223333444456888999998654 7777
Q ss_pred CCcceeeecCC----chhHHHHHHhCCCEeecccccchhhhHHHHHHH---hcceEEeccCCCCCccccccccccccHHH
Q 037640 272 PSVGGFLTHCG----WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHL---LKIGVKIGVENPMTWGEEQNIGVLVKRDD 344 (398)
Q Consensus 272 ~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~---~g~g~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
+++ ||.-.. -++++||+++|+|+|+.... .....+ +. -+.|..+... +.++
T Consensus 332 aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv-~~~~~~~~G~lv~~~---------------d~~~ 389 (465)
T PLN02871 332 GDV--FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDII-PPDQEGKTGFLYTPG---------------DVDD 389 (465)
T ss_pred CCE--EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhh-hcCCCCCceEEeCCC---------------CHHH
Confidence 777 774433 34789999999999987643 223334 34 5678877643 7899
Q ss_pred HHHHHHHHhccCcchHHHHHHHHHHH
Q 037640 345 VKNAVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 345 l~~ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
+.++|.++++|++..+.+.+++++..
T Consensus 390 la~~i~~ll~~~~~~~~~~~~a~~~~ 415 (465)
T PLN02871 390 CVEKLETLLADPELRERMGAAAREEV 415 (465)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999988866667777776544
No 46
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.59 E-value=1.5e-05 Score=76.47 Aligned_cols=155 Identities=14% Similarity=0.036 Sum_probs=85.6
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHHhCCCC-EEEEEeCCCCchhhhhccCchhHHHHhcC-CCeEEeecCchhhhhcCC
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLEASNRP-FIWVIREGETSKELKKWVVEDGFEERIKG-RGLVIWDWAPQVLILSHP 272 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~-~i~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~v~~~~~~pq~~~L~~~ 272 (398)
++|.+--||...--...+-.++++.+....+ .++.+..... . +.+.+.... ..+.+.+ .-.++++.+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--------~-~~i~~~~~~~~~~~~~~--~~~~~m~~a 236 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--------G-KDLKEIYGDISEFEISY--DTHKALLEA 236 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--------H-HHHHHHHhcCCCcEEec--cHHHHHHhh
Confidence 5888989998863333344344444433211 2222222211 1 112222211 2333322 334688888
Q ss_pred CcceeeecCCchhHHHHHHhCCCEeecccc--cchhhhHHHHHH--HhcceEEecc----CCCCCccccccccccccHHH
Q 037640 273 SVGGFLTHCGWNSTLEGVCAGLPLLTWPLF--ADQFTNEKLAVH--LLKIGVKIGV----ENPMTWGEEQNIGVLVKRDD 344 (398)
Q Consensus 273 ~~~~~ithgG~~s~~eal~~GvP~l~~P~~--~DQ~~na~~v~~--~~g~g~~l~~----~~~~~~~~~~~~~~~~~~~~ 344 (398)
++ .|+-+|..|+ |++..|+|||+ ++. .-|+.||++++. ..|+.-.+.. ++. . -+=.+++++++.
T Consensus 237 Dl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~v--v--PEllQ~~~t~~~ 308 (347)
T PRK14089 237 EF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPL--H--PELLQEFVTVEN 308 (347)
T ss_pred hH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCccccc--C--chhhcccCCHHH
Confidence 88 9999999998 99999999999 553 478999999841 3443333311 000 0 000123688999
Q ss_pred HHHHHHHHhccCcchHHHHHHHHHHHHHH
Q 037640 345 VKNAVERLMDEGNDGEERRNRALNLAKMA 373 (398)
Q Consensus 345 l~~ai~~vl~~~~~~~~~~~~a~~l~~~~ 373 (398)
|.+++.+. . .+.+++...++++.+
T Consensus 309 la~~i~~~-~----~~~~~~~~~~l~~~l 332 (347)
T PRK14089 309 LLKAYKEM-D----REKFFKKSKELREYL 332 (347)
T ss_pred HHHHHHHH-H----HHHHHHHHHHHHHHh
Confidence 99999772 1 224555555555543
No 47
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.58 E-value=3e-05 Score=77.14 Aligned_cols=85 Identities=14% Similarity=0.192 Sum_probs=61.2
Q ss_pred hhhcCCCcceeeec-----CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCcccccccccccc
Q 037640 267 LILSHPSVGGFLTH-----CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVK 341 (398)
Q Consensus 267 ~~L~~~~~~~~ith-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~ 341 (398)
.+++.+++ ++.. +|..+++||+++|+|+|+.|..+++......+ .+.|+++.. -+
T Consensus 315 ~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~~-----------------~d 374 (425)
T PRK05749 315 LLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQV-----------------ED 374 (425)
T ss_pred HHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEEE-----------------CC
Confidence 46666766 3331 33446999999999999999888877777766 355655542 26
Q ss_pred HHHHHHHHHHHhccCcchHHHHHHHHHHHH
Q 037640 342 RDDVKNAVERLMDEGNDGEERRNRALNLAK 371 (398)
Q Consensus 342 ~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~ 371 (398)
.++|.++|.++++|++..+.+.+++++..+
T Consensus 375 ~~~La~~l~~ll~~~~~~~~m~~~a~~~~~ 404 (425)
T PRK05749 375 AEDLAKAVTYLLTDPDARQAYGEAGVAFLK 404 (425)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 789999999999988666666666665543
No 48
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.53 E-value=9.6e-06 Score=78.95 Aligned_cols=129 Identities=12% Similarity=0.190 Sum_probs=78.9
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHHhC-----CCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCchh--
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLEAS-----NRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQV-- 266 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq~-- 266 (398)
.+|+++++-.... ...+..+++++.+. +.++++..+++.. .-..+.+... ..++.+.+.+++.
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPV--------VREPLHKHLGDSKRVHLIEPLEYLDF 268 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChH--------HHHHHHHHhCCCCCEEEECCCChHHH
Confidence 4666655433221 13456677776653 4566665443221 1111222222 3578887766654
Q ss_pred -hhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHH
Q 037640 267 -LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDV 345 (398)
Q Consensus 267 -~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l 345 (398)
.+++++.+ +|+-.|. .+.||+++|+|+|.++-.+++.. +. ..|.+..+. -+.++|
T Consensus 269 ~~~l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~-~~g~~~lv~----------------~d~~~i 324 (365)
T TIGR00236 269 LNLAANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TV-EAGTNKLVG----------------TDKENI 324 (365)
T ss_pred HHHHHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HH-hcCceEEeC----------------CCHHHH
Confidence 45667776 8987764 47999999999999876555442 32 356665542 378899
Q ss_pred HHHHHHHhccC
Q 037640 346 KNAVERLMDEG 356 (398)
Q Consensus 346 ~~ai~~vl~~~ 356 (398)
.+++.++++|+
T Consensus 325 ~~ai~~ll~~~ 335 (365)
T TIGR00236 325 TKAAKRLLTDP 335 (365)
T ss_pred HHHHHHHHhCh
Confidence 99999999877
No 49
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.46 E-value=9.5e-05 Score=70.52 Aligned_cols=145 Identities=17% Similarity=0.103 Sum_probs=86.7
Q ss_pred ceEEEeeCCcccC-CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhh---hhc
Q 037640 195 SVVYACLGSMCNL-IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVL---ILS 270 (398)
Q Consensus 195 ~vv~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~---~L~ 270 (398)
..+++..|+.... ..+.+.+++..+...+.++++. |..... ...........++.+.+|+++.+ +++
T Consensus 191 ~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~~~--------~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 261 (359)
T cd03823 191 RLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGLEL--------EEESYELEGDPRVEFLGAYPQEEIDDFYA 261 (359)
T ss_pred ceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCchhh--------hHHHHhhcCCCeEEEeCCCCHHHHHHHHH
Confidence 3666777876652 2333333333333334555443 433211 00000011347899999997664 587
Q ss_pred CCCcceeeec--CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHH
Q 037640 271 HPSVGGFLTH--CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKN 347 (398)
Q Consensus 271 ~~~~~~~ith--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 347 (398)
.+++-++-++ .|+ .++.||+++|+|+|+.+.. .....+ +..+.|..+... +.+++.+
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~~~---------------d~~~l~~ 321 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELV-RDGVNGLLFPPG---------------DAEDLAA 321 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHh-cCCCcEEEECCC---------------CHHHHHH
Confidence 8887332232 333 4899999999999997643 345555 355578777653 6899999
Q ss_pred HHHHHhccCcchHHHHHHHHH
Q 037640 348 AVERLMDEGNDGEERRNRALN 368 (398)
Q Consensus 348 ai~~vl~~~~~~~~~~~~a~~ 368 (398)
++.++++|++..+.+++++++
T Consensus 322 ~i~~l~~~~~~~~~~~~~~~~ 342 (359)
T cd03823 322 ALERLIDDPDLLERLRAGIEP 342 (359)
T ss_pred HHHHHHhChHHHHHHHHhHHH
Confidence 999999987555555555443
No 50
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.44 E-value=0.00018 Score=70.18 Aligned_cols=94 Identities=13% Similarity=0.119 Sum_probs=68.4
Q ss_pred CCCeEEeecCchhh---hhcCCCcceeeecC---C-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCC
Q 037640 254 GRGLVIWDWAPQVL---ILSHPSVGGFLTHC---G-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVEN 326 (398)
Q Consensus 254 ~~~v~~~~~~pq~~---~L~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 326 (398)
..++.+.+|+|+.+ +++.+++ ++... | -.+++||+++|+|+|+....+ ....+ ++.+.|..++..
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i-~~~~~g~~~~~~- 353 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIV-VDGVTGLLVDPR- 353 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHc-cCCCCeEEeCCC-
Confidence 46899999999765 4777777 66432 2 368999999999999876433 44455 466788877543
Q ss_pred CCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 327 PMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
+.+++.++|.++++|++....+.+++++.
T Consensus 354 --------------~~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 354 --------------DPEALAAALRRLLTDPALRRRLSRAGLRR 382 (398)
T ss_pred --------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 78999999999998875555555555543
No 51
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.43 E-value=8e-05 Score=72.00 Aligned_cols=94 Identities=13% Similarity=0.092 Sum_probs=67.2
Q ss_pred CCCeEEeecCchhh---hhcCCCcceeeec----------CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceE
Q 037640 254 GRGLVIWDWAPQVL---ILSHPSVGGFLTH----------CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGV 320 (398)
Q Consensus 254 ~~~v~~~~~~pq~~---~L~~~~~~~~ith----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~ 320 (398)
..++.+.+++|+.+ +++.+++ +|.. |--+++.||+++|+|+|+-+.. .+...+ +..+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i-~~~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAV-EDGETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----Cchhhe-ecCCeeE
Confidence 46788889998654 5777887 5532 2247999999999999987654 355555 4667787
Q ss_pred EeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 321 KIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
.++. -+.+++.++|.++++|++....+++++++.
T Consensus 317 ~~~~---------------~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 350 (367)
T cd05844 317 LVPE---------------GDVAALAAALGRLLADPDLRARMGAAGRRR 350 (367)
T ss_pred EECC---------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 7754 377999999999998875445555555443
No 52
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.41 E-value=0.00061 Score=64.82 Aligned_cols=135 Identities=13% Similarity=0.065 Sum_probs=81.4
Q ss_pred ceEEEeeCCcccC-CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHH---h-cCCCeEEeecCchh---
Q 037640 195 SVVYACLGSMCNL-IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEER---I-KGRGLVIWDWAPQV--- 266 (398)
Q Consensus 195 ~vv~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~---~-~~~~v~~~~~~pq~--- 266 (398)
..+++..|+.... ..+.+...++.+...+..+.+.+.+... ..+.+.+. . ...|+.+.+++++.
T Consensus 202 ~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 273 (377)
T cd03798 202 KKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--------LREALEALAAELGLEDRVTFLGAVPHEEVP 273 (377)
T ss_pred ceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--------chHHHHHHHHhcCCcceEEEeCCCCHHHHH
Confidence 3667777876652 2334444444444332334443333221 11111121 1 24689999999875
Q ss_pred hhhcCCCcceeee--cCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHH
Q 037640 267 LILSHPSVGGFLT--HCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDD 344 (398)
Q Consensus 267 ~~L~~~~~~~~it--hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
.++..+++-++.+ -|.-++++||+++|+|+|+.+.. .....+ +..+.|..++. -+.++
T Consensus 274 ~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~-~~~~~g~~~~~---------------~~~~~ 333 (377)
T cd03798 274 AYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEII-TDGENGLLVPP---------------GDPEA 333 (377)
T ss_pred HHHHhcCeeecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHh-cCCcceeEECC---------------CCHHH
Confidence 4677777733222 23457899999999999987643 344455 46666777654 38899
Q ss_pred HHHHHHHHhccCc
Q 037640 345 VKNAVERLMDEGN 357 (398)
Q Consensus 345 l~~ai~~vl~~~~ 357 (398)
+.++|.+++++++
T Consensus 334 l~~~i~~~~~~~~ 346 (377)
T cd03798 334 LAEAILRLLADPW 346 (377)
T ss_pred HHHHHHHHhcCcH
Confidence 9999999998763
No 53
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.41 E-value=0.00025 Score=67.83 Aligned_cols=145 Identities=15% Similarity=0.139 Sum_probs=90.1
Q ss_pred eEEEeeCCcccC-CHHHHHHHHHHHHh--CCCCEEEEEeCCCCchhhhhccCchhHHHH---h-cCCCeEEeecCchhh-
Q 037640 196 VVYACLGSMCNL-IPSQMMELGLGLEA--SNRPFIWVIREGETSKELKKWVVEDGFEER---I-KGRGLVIWDWAPQVL- 267 (398)
Q Consensus 196 vv~vs~Gs~~~~-~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~---~-~~~~v~~~~~~pq~~- 267 (398)
.+++..|+.... ..+.+.+++..+.. .+.++++. |.... .+.+.+. . ...++...+++|+.+
T Consensus 203 ~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~-G~~~~---------~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 272 (374)
T cd03817 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIV-GDGPE---------REELEELARELGLADRVIFTGFVPREEL 272 (374)
T ss_pred eEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEE-eCCch---------HHHHHHHHHHcCCCCcEEEeccCChHHH
Confidence 566677876642 34444444444444 33454444 32221 1112121 1 246899999998765
Q ss_pred --hhcCCCcceeeecC----CchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCcccccccccccc
Q 037640 268 --ILSHPSVGGFLTHC----GWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVK 341 (398)
Q Consensus 268 --~L~~~~~~~~ithg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~ 341 (398)
++..+++ +|..+ .-++++||+++|+|+|+.... ..+..+ +..+.|..++.. +
T Consensus 273 ~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i-~~~~~g~~~~~~---------------~ 330 (374)
T cd03817 273 PDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLV-ADGENGFLFPPG---------------D 330 (374)
T ss_pred HHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----Chhhhe-ecCceeEEeCCC---------------C
Confidence 6778887 55333 347899999999999997543 344455 455778777643 2
Q ss_pred HHHHHHHHHHHhccCcchHHHHHHHHHHHHHH
Q 037640 342 RDDVKNAVERLMDEGNDGEERRNRALNLAKMA 373 (398)
Q Consensus 342 ~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~ 373 (398)
. ++.+++.++++|++....+.+++++..+..
T Consensus 331 ~-~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 361 (374)
T cd03817 331 E-ALAEALLRLLQDPELRRRLSKNAEESAEKF 361 (374)
T ss_pred H-HHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 2 899999999998866666666666666553
No 54
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.40 E-value=0.00016 Score=69.51 Aligned_cols=148 Identities=16% Similarity=0.184 Sum_probs=90.8
Q ss_pred CceEEEeeCCccc-CCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHH---HhcCCCeEEeecCchhh-
Q 037640 194 KSVVYACLGSMCN-LIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEE---RIKGRGLVIWDWAPQVL- 267 (398)
Q Consensus 194 ~~vv~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~v~~~~~~pq~~- 267 (398)
+..+++..|+... ...+.+.+.+..+.+. +.++++ +|.... .+.+.+ .....|+.+.+++++.+
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~~---------~~~~~~~~~~~~~~~v~~~g~~~~~~~ 288 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGPE---------KEELKELAKALGLDNVTFLGRVPKEEL 288 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCccc---------HHHHHHHHHHcCCCcEEEeCCCChHHH
Confidence 3467777888765 2234444444444433 445444 443321 112222 22357899999998664
Q ss_pred --hhcCCCcceeeecCC-------chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccc
Q 037640 268 --ILSHPSVGGFLTHCG-------WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGV 338 (398)
Q Consensus 268 --~L~~~~~~~~ithgG-------~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~ 338 (398)
++..+++.++-++.+ -++++||+++|+|+|+.+..+.+. .+ ...+.|..+...
T Consensus 289 ~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~----~~-~~~~~g~~~~~~------------- 350 (394)
T cd03794 289 PELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE----LV-EEAGAGLVVPPG------------- 350 (394)
T ss_pred HHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh----hh-ccCCcceEeCCC-------------
Confidence 677777733323321 234799999999999988765433 23 233667766543
Q ss_pred cccHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Q 037640 339 LVKRDDVKNAVERLMDEGNDGEERRNRALNLAK 371 (398)
Q Consensus 339 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~ 371 (398)
+.+++.++|.+++.|++..+.+++++++..+
T Consensus 351 --~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T cd03794 351 --DPEALAAAILELLDDPEERAEMGENGRRYVE 381 (394)
T ss_pred --CHHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 7899999999999888666666666665544
No 55
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.40 E-value=0.00033 Score=66.38 Aligned_cols=93 Identities=17% Similarity=0.192 Sum_probs=66.6
Q ss_pred cCCCeEEeecCchh---hhhcCCCcceeee----cCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccC
Q 037640 253 KGRGLVIWDWAPQV---LILSHPSVGGFLT----HCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVE 325 (398)
Q Consensus 253 ~~~~v~~~~~~pq~---~~L~~~~~~~~it----hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 325 (398)
...++.+.+++++. .++..+++ +|. -|.-++++||+++|+|+|+.+. ......+ +..+.|..++.
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~-~~~~~g~~~~~- 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVV-EDGETGLLVPP- 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHh-cCCcceEEeCC-
Confidence 35789999999754 36777777 553 2445799999999999999765 3345555 35667777754
Q ss_pred CCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHH
Q 037640 326 NPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRAL 367 (398)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~ 367 (398)
.+.+++.++|.++++|++..+.+.++++
T Consensus 326 --------------~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 326 --------------GDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred --------------CCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 3689999999999988754444444444
No 56
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.28 E-value=4.9e-05 Score=73.67 Aligned_cols=131 Identities=18% Similarity=0.180 Sum_probs=82.3
Q ss_pred CceEEEeeCCcccC-CHHHHHHHHHHHHhCCC-CEEEEEeCCCCchhhhhccCchhHHHH---hc--CCCeEEeecCchh
Q 037640 194 KSVVYACLGSMCNL-IPSQMMELGLGLEASNR-PFIWVIREGETSKELKKWVVEDGFEER---IK--GRGLVIWDWAPQV 266 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~-~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~~~~---~~--~~~v~~~~~~pq~ 266 (398)
+++|++.+|..... ..+.+..++++++.... ++.+....... ..+.+.+. .. ..++.+.+..++.
T Consensus 198 ~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--------~~~~l~~~~~~~~~~~~~v~~~~~~~~~ 269 (363)
T cd03786 198 KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--------TRPRIREAGLEFLGHHPNVLLISPLGYL 269 (363)
T ss_pred CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--------hHHHHHHHHHhhccCCCCEEEECCcCHH
Confidence 44778888877654 34556778888876532 24443332211 11122221 11 3677777655544
Q ss_pred ---hhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 267 ---LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 267 ---~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
.++..+++ ||+-.| +.+.||+++|+|+|.++.. |. ++.++ +.|+++.+. -+.+
T Consensus 270 ~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~-~~g~~~~~~----------------~~~~ 325 (363)
T cd03786 270 YFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETV-ESGTNVLVG----------------TDPE 325 (363)
T ss_pred HHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhh-heeeEEecC----------------CCHH
Confidence 45666777 999999 7778999999999998632 32 43443 566665442 1578
Q ss_pred HHHHHHHHHhccC
Q 037640 344 DVKNAVERLMDEG 356 (398)
Q Consensus 344 ~l~~ai~~vl~~~ 356 (398)
+|.++|.++++++
T Consensus 326 ~i~~~i~~ll~~~ 338 (363)
T cd03786 326 AILAAIEKLLSDE 338 (363)
T ss_pred HHHHHHHHHhcCc
Confidence 9999999999876
No 57
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.26 E-value=0.00034 Score=66.01 Aligned_cols=148 Identities=12% Similarity=0.137 Sum_probs=86.3
Q ss_pred eEEEeeCCcccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCc-hhhhhc
Q 037640 196 VVYACLGSMCNL-IPSQMMELGLGLEAS--NRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAP-QVLILS 270 (398)
Q Consensus 196 vv~vs~Gs~~~~-~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~p-q~~~L~ 270 (398)
.+++.+|+.... ..+.+.++++.+.+. +.++++ +|....... +.. ...+.. ..++.+.++.. -..++.
T Consensus 179 ~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i-~G~~~~~~~-----~~~-~~~~~~~~~~v~~~g~~~~~~~~~~ 251 (348)
T cd03820 179 KRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRI-VGDGPEREA-----LEA-LIKELGLEDRVILLGFTKNIEEYYA 251 (348)
T ss_pred cEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEE-EeCCCCHHH-----HHH-HHHHcCCCCeEEEcCCcchHHHHHH
Confidence 456667776552 344444555555432 334444 343321111 111 111112 35677766633 335788
Q ss_pred CCCcceeeecCC----chhHHHHHHhCCCEeecccccchhhhHHHHHHHhc-ceEEeccCCCCCccccccccccccHHHH
Q 037640 271 HPSVGGFLTHCG----WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLK-IGVKIGVENPMTWGEEQNIGVLVKRDDV 345 (398)
Q Consensus 271 ~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g-~g~~l~~~~~~~~~~~~~~~~~~~~~~l 345 (398)
.+++ +|.-.. -++++||+++|+|+|+.+..+.+ ..+. ..+ .|..++. -+.+++
T Consensus 252 ~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~----~~~~-~~~~~g~~~~~---------------~~~~~~ 309 (348)
T cd03820 252 KASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGP----SEII-EDGVNGLLVPN---------------GDVEAL 309 (348)
T ss_pred hCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCch----Hhhh-ccCcceEEeCC---------------CCHHHH
Confidence 8777 665432 46899999999999987654433 2332 334 7777754 367999
Q ss_pred HHHHHHHhccCcchHHHHHHHHHHHHH
Q 037640 346 KNAVERLMDEGNDGEERRNRALNLAKM 372 (398)
Q Consensus 346 ~~ai~~vl~~~~~~~~~~~~a~~l~~~ 372 (398)
.++|.++++|++..+.+++++++..+.
T Consensus 310 ~~~i~~ll~~~~~~~~~~~~~~~~~~~ 336 (348)
T cd03820 310 AEALLRLMEDEELRKRMGANARESAER 336 (348)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 999999999986666666666555444
No 58
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.19 E-value=0.00074 Score=64.66 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=64.5
Q ss_pred CCCeEEee-cCchh---hhhcCCCcceeeec----CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccC
Q 037640 254 GRGLVIWD-WAPQV---LILSHPSVGGFLTH----CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVE 325 (398)
Q Consensus 254 ~~~v~~~~-~~pq~---~~L~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 325 (398)
..++...+ |+|+. .++..+++-++-++ |.-++++||+++|+|+|+.+..+ ...+ ...+.|..+...
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i-~~~~~g~~~~~~ 319 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV-LDGGTGLLVPPG 319 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee-eeCCCcEEEcCC
Confidence 46777765 48864 46777777332232 22468999999999999987654 2334 355667766543
Q ss_pred CCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 037640 326 NPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
+.+++.+++.++++|++...++++++++..
T Consensus 320 ---------------d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~ 349 (366)
T cd03822 320 ---------------DPAALAEAIRRLLADPELAQALRARAREYA 349 (366)
T ss_pred ---------------CHHHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 689999999999988755555555555443
No 59
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.19 E-value=2.9e-05 Score=74.88 Aligned_cols=256 Identities=15% Similarity=0.167 Sum_probs=133.2
Q ss_pred HHHHHHHHhchHHHHHHHhhcCCCCcEEEE--CCCc-ccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCC
Q 037640 9 LDFFTAADKLLEPVENLFGQLKPQPNCIIS--DVCL-PYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSE 85 (398)
Q Consensus 9 ~~l~~a~~~~~~~l~~~L~~~~~~~D~VI~--D~~~-~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
..+...+..+...+.+.+.+ .+||+||+ |-+. .++..+|..++||.+.+.... -+ .
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~--~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGl-Rs------------------~ 104 (346)
T PF02350_consen 46 QSMAKSTGLAIIELADVLER--EKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGL-RS------------------G 104 (346)
T ss_dssp S-HHHHHHHHHHHHHHHHHH--HT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES------------------------S
T ss_pred chHHHHHHHHHHHHHHHHHh--cCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCC-Cc------------------c
Confidence 34556667778888999988 89998876 4443 467888999999988652210 00 0
Q ss_pred CCccccCCCCcccccccccccccCCcchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHh-h-cCCceeecCcccCC
Q 037640 86 SEYFSVPGLPDKIELTKKQVDSTQGQKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKK-I-SRDKAWCIGPVSLS 163 (398)
Q Consensus 86 ~~~~~~pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~-~-~~~~v~~vGpl~~~ 163 (398)
. .. -|++. ...+...+ +-++..++.+-...+ ...+ - -+.+|+.||-...+
T Consensus 105 d--~~-~g~~d------------------e~~R~~i~--~la~lhf~~t~~~~~-----~L~~~G~~~~rI~~vG~~~~D 156 (346)
T PF02350_consen 105 D--RT-EGMPD------------------EINRHAID--KLAHLHFAPTEEARE-----RLLQEGEPPERIFVVGNPGID 156 (346)
T ss_dssp ---TT-SSTTH------------------HHHHHHHH--HH-SEEEESSHHHHH-----HHHHTT--GGGEEE---HHHH
T ss_pred c--cC-CCCch------------------hhhhhhhh--hhhhhhccCCHHHHH-----HHHhcCCCCCeEEEEChHHHH
Confidence 0 00 01222 22222222 234456666644322 1111 1 13589999965443
Q ss_pred CcccchhhccCCCCCCChhhh--hhhhcCCCCCceEEEeeCCcccCC-H---HHHHHHHHHHHhC-CCCEEEEEeCCCCc
Q 037640 164 NKEYSDKAQRGNTSSLDEHKC--LKWLDSKDPKSVVYACLGSMCNLI-P---SQMMELGLGLEAS-NRPFIWVIREGETS 236 (398)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~vv~vs~Gs~~~~~-~---~~~~~~~~al~~~-~~~~i~~~~~~~~~ 236 (398)
.-.... .. ..+.. ..++.. .+++.++|++=...... + ..+.++++++.+. +.++||.+.+...
T Consensus 157 ~l~~~~--~~------~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~- 226 (346)
T PF02350_consen 157 ALLQNK--EE------IEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPR- 226 (346)
T ss_dssp HHHHHH--HT------TCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HH-
T ss_pred HHHHhH--HH------HhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCch-
Confidence 211100 00 01111 123222 45568999985555544 3 3455667777765 7889999874421
Q ss_pred hhhhhccCchhHHHHhcC-CCeEEeecCchh---hhhcCCCcceeeecCCchhHH-HHHHhCCCEeecccccchhhhHHH
Q 037640 237 KELKKWVVEDGFEERIKG-RGLVIWDWAPQV---LILSHPSVGGFLTHCGWNSTL-EGVCAGLPLLTWPLFADQFTNEKL 311 (398)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~-~~v~~~~~~pq~---~~L~~~~~~~~ithgG~~s~~-eal~~GvP~l~~P~~~DQ~~na~~ 311 (398)
....+.+++.. +|+.+.+-+++. .+|.++.+ +||-.| ++. ||.+.|+|+|.+ -|+...-.-
T Consensus 227 -------~~~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i---R~~geRqe~ 292 (346)
T PF02350_consen 227 -------GSDIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI---RDSGERQEG 292 (346)
T ss_dssp -------HHHHHHHHHTT-TTEEEE----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC---SSS-S-HHH
T ss_pred -------HHHHHHHHhcccCCEEEECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe---cCCCCCHHH
Confidence 11222232221 488887766654 57788888 999999 677 999999999999 333322222
Q ss_pred HHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhcc
Q 037640 312 AVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDE 355 (398)
Q Consensus 312 v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 355 (398)
+ ..|..+.+ . .+.++|.+++.+++.+
T Consensus 293 r--~~~~nvlv--~--------------~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 293 R--ERGSNVLV--G--------------TDPEAIIQAIEKALSD 318 (346)
T ss_dssp H--HTTSEEEE--T--------------SSHHHHHHHHHHHHH-
T ss_pred H--hhcceEEe--C--------------CCHHHHHHHHHHHHhC
Confidence 2 34555543 2 5899999999999974
No 60
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.17 E-value=0.00037 Score=66.71 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=86.3
Q ss_pred ceEEEeeCCccc-CCHHHHHHHHHHHHhC--CCCEEEEEeCCCCchhhhhccCchhHHHHh-cCCCeEEeecCchh---h
Q 037640 195 SVVYACLGSMCN-LIPSQMMELGLGLEAS--NRPFIWVIREGETSKELKKWVVEDGFEERI-KGRGLVIWDWAPQV---L 267 (398)
Q Consensus 195 ~vv~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~pq~---~ 267 (398)
.++++.+|+... ...+.+.+.+..+... +..+++. |....... + ..+.++. ...++.+.+++|+. .
T Consensus 179 ~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~-G~~~~~~~-----~-~~~~~~~~~~~~v~~~g~~~~~~l~~ 251 (355)
T cd03799 179 PLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIV-GDGPLRDE-----L-EALIAELGLEDRVTLLGAKSQEEVRE 251 (355)
T ss_pred CeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEE-ECCccHHH-----H-HHHHHHcCCCCeEEECCcCChHHHHH
Confidence 356677787654 2234444444444443 3344433 33221111 1 1111111 24789999999855 4
Q ss_pred hhcCCCcceeeec--------CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCcccccccccc
Q 037640 268 ILSHPSVGGFLTH--------CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVL 339 (398)
Q Consensus 268 ~L~~~~~~~~ith--------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~ 339 (398)
+++.+++-++-+. |.-++++||+++|+|+|+.+..+ ....+ +....|..+..
T Consensus 252 ~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~~~~~--------------- 311 (355)
T cd03799 252 LLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGLLVPP--------------- 311 (355)
T ss_pred HHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceEEeCC---------------
Confidence 6677777333322 22478999999999999976532 22344 34447777754
Q ss_pred ccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 340 VKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 340 ~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
-+.+++.++|.++++|++....+++++++.
T Consensus 312 ~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~ 341 (355)
T cd03799 312 GDPEALADAIERLLDDPELRREMGEAGRAR 341 (355)
T ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 378999999999998875555555555543
No 61
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.17 E-value=1.2e-05 Score=65.82 Aligned_cols=113 Identities=22% Similarity=0.214 Sum_probs=76.6
Q ss_pred eEEEeeCCcccCCH-H--HHHHHHHHHHhCCC-CEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEE--eecCch-hhh
Q 037640 196 VVYACLGSMCNLIP-S--QMMELGLGLEASNR-PFIWVIREGETSKELKKWVVEDGFEERIKGRGLVI--WDWAPQ-VLI 268 (398)
Q Consensus 196 vv~vs~Gs~~~~~~-~--~~~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~~~pq-~~~ 268 (398)
.+||+-||...-.. . .-.+..+.|.+.|. +.|..+|.+... .++......+..++.+ .+|-|- .+.
T Consensus 5 ~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~-------~~d~~~~~~k~~gl~id~y~f~psl~e~ 77 (170)
T KOG3349|consen 5 TVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPF-------FGDPIDLIRKNGGLTIDGYDFSPSLTED 77 (170)
T ss_pred EEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccC-------CCCHHHhhcccCCeEEEEEecCccHHHH
Confidence 79999999885221 1 11346777777764 778888876321 2322222212334443 457775 456
Q ss_pred hcCCCcceeeecCCchhHHHHHHhCCCEeeccc----ccchhhhHHHHHHHhcc
Q 037640 269 LSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPL----FADQFTNEKLAVHLLKI 318 (398)
Q Consensus 269 L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~~v~~~~g~ 318 (398)
.+.+++ +|+|+|.||++|.+..|+|.|+++- -.+|-.-|..++ +.|-
T Consensus 78 I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~-~egy 128 (170)
T KOG3349|consen 78 IRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLA-EEGY 128 (170)
T ss_pred HhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHH-hcCc
Confidence 666777 9999999999999999999999983 457888888885 5554
No 62
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.13 E-value=0.00094 Score=65.74 Aligned_cols=95 Identities=20% Similarity=0.196 Sum_probs=65.3
Q ss_pred cCCCeEEeecCchh-hhhcCCCcceeeec--CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 253 KGRGLVIWDWAPQV-LILSHPSVGGFLTH--CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 253 ~~~~v~~~~~~pq~-~~L~~~~~~~~ith--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
...++.+.+++++. .+++++++-++-++ .|. +.++||+++|+|+|+.+...+.. . +..|.|..+. .
T Consensus 278 ~~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~-~~~~~g~lv~-~--- 347 (397)
T TIGR03087 278 ALPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----D-ALPGAELLVA-A--- 347 (397)
T ss_pred cCCCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----c-ccCCcceEeC-C---
Confidence 35789999999865 57888888332243 354 46999999999999987543221 1 1335666553 3
Q ss_pred CccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
+.+++.++|.++++|++..+.+.+++++.
T Consensus 348 ------------~~~~la~ai~~ll~~~~~~~~~~~~ar~~ 376 (397)
T TIGR03087 348 ------------DPADFAAAILALLANPAEREELGQAARRR 376 (397)
T ss_pred ------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 78999999999998875555555555544
No 63
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.13 E-value=0.00098 Score=64.24 Aligned_cols=81 Identities=20% Similarity=0.217 Sum_probs=68.5
Q ss_pred eeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccC
Q 037640 277 FLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEG 356 (398)
Q Consensus 277 ~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 356 (398)
|+.+||+| .+|++++|+|+|.-|+..-|..-++++ ++.|+|+.++ +++.|.+++..+++|+
T Consensus 327 lv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l-~~~ga~~~v~-----------------~~~~l~~~v~~l~~~~ 387 (419)
T COG1519 327 LVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERL-LQAGAGLQVE-----------------DADLLAKAVELLLADE 387 (419)
T ss_pred ccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHH-HhcCCeEEEC-----------------CHHHHHHHHHHhcCCH
Confidence 66799988 689999999999999999999999999 5999999884 3678899998888888
Q ss_pred cchHHHHHHHHHHHHHHHHH
Q 037640 357 NDGEERRNRALNLAKMAKMA 376 (398)
Q Consensus 357 ~~~~~~~~~a~~l~~~~~~~ 376 (398)
+..+.|.+++.++-+..+.+
T Consensus 388 ~~r~~~~~~~~~~v~~~~ga 407 (419)
T COG1519 388 DKREAYGRAGLEFLAQNRGA 407 (419)
T ss_pred HHHHHHHHHHHHHHHHhhHH
Confidence 77788877777776665533
No 64
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.12 E-value=0.0038 Score=60.32 Aligned_cols=145 Identities=13% Similarity=0.138 Sum_probs=85.9
Q ss_pred eEEEeeCCcccC-CHHHHHHHHHHHHh-CCCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCchh-hhhcC
Q 037640 196 VVYACLGSMCNL-IPSQMMELGLGLEA-SNRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQV-LILSH 271 (398)
Q Consensus 196 vv~vs~Gs~~~~-~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq~-~~L~~ 271 (398)
.+++.+|..... ..+.+.+.+..+.+ .+.++++. |....... +- ....+.. ..++.+.++.++. .+++.
T Consensus 198 ~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~-G~g~~~~~-----~~-~~~~~~~~~~~v~~~g~~~~~~~~~~~ 270 (371)
T cd04962 198 KVLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLV-GDGPERSP-----AE-RLARELGLQDDVLFLGKQDHVEELLSI 270 (371)
T ss_pred eEEEEecccccccCHHHHHHHHHHHHhcCCceEEEE-cCCcCHHH-----HH-HHHHHcCCCceEEEecCcccHHHHHHh
Confidence 566677776642 23333333333333 35555554 33321111 11 1111112 3568887877654 57877
Q ss_pred CCcceeeec----CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHH
Q 037640 272 PSVGGFLTH----CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKN 347 (398)
Q Consensus 272 ~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 347 (398)
+++ +|.- |.-.+++||+++|+|+|+.... ..+..+ +.-..|..++.. +.+++.+
T Consensus 271 ~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i-~~~~~G~~~~~~---------------~~~~l~~ 328 (371)
T cd04962 271 ADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVV-KHGETGFLVDVG---------------DVEAMAE 328 (371)
T ss_pred cCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----Cchhhh-cCCCceEEcCCC---------------CHHHHHH
Confidence 777 5522 2346999999999999996543 344455 344567766543 7899999
Q ss_pred HHHHHhccCcchHHHHHHHHHH
Q 037640 348 AVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 348 ai~~vl~~~~~~~~~~~~a~~l 369 (398)
++.++++|++....+++++++.
T Consensus 329 ~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 329 YALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred HHHHHHhCHHHHHHHHHHHHHH
Confidence 9999998886666666666665
No 65
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.12 E-value=0.0015 Score=64.24 Aligned_cols=97 Identities=19% Similarity=0.116 Sum_probs=67.3
Q ss_pred CCCeEEeecCchhh---hhcCCCcceeeec-CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 254 GRGLVIWDWAPQVL---ILSHPSVGGFLTH-CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 254 ~~~v~~~~~~pq~~---~L~~~~~~~~ith-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
..+|.+.+++|+.+ +++.+++-++.+. .|. ++++||+++|+|+|+... ......+ +.-..|..++.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i-~~~~~G~lv~~---- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVI-TDGENGLLVDF---- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhc-ccCCceEEcCC----
Confidence 46889999999765 5667777333333 232 489999999999998643 3444445 34456776654
Q ss_pred CccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
-+.+++.++|.++++|++....+.+++++..
T Consensus 351 -----------~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~ 381 (396)
T cd03818 351 -----------FDPDALAAAVIELLDDPARRARLRRAARRTA 381 (396)
T ss_pred -----------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3789999999999998765566666655543
No 66
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.10 E-value=0.00065 Score=68.93 Aligned_cols=192 Identities=15% Similarity=0.088 Sum_probs=102.4
Q ss_pred cCCceeecC-cccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHH--h--CCC
Q 037640 150 SRDKAWCIG-PVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLE--A--SNR 224 (398)
Q Consensus 150 ~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~--~--~~~ 224 (398)
.+.++.+|| |+....+.. .+.++..+-+.-.+++++|-+--||-..--...+-.++++.+ . .+.
T Consensus 379 ~gv~v~yVGHPL~d~i~~~-----------~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l 447 (608)
T PRK01021 379 SPLRTVYLGHPLVETISSF-----------SPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTH 447 (608)
T ss_pred cCCCeEEECCcHHhhcccC-----------CCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCe
Confidence 567899999 886542211 012333333333345568888889877622223334555554 3 245
Q ss_pred CEEEEEeCCCCchhhhhccCchhHHHHhcCCC---eEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeeccc
Q 037640 225 PFIWVIREGETSKELKKWVVEDGFEERIKGRG---LVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPL 301 (398)
Q Consensus 225 ~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~ 301 (398)
+|+....... ..+.+.+.....+ +.+..--...++++.+++ .+.-+| ..|+|+...|+|||++=-
T Consensus 448 ~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSG-TaTLEaAL~g~PmVV~YK 515 (608)
T PRK01021 448 QLLVSSANPK---------YDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCG-TIVLETALNQTPTIVTCQ 515 (608)
T ss_pred EEEEecCchh---------hHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCC-HHHHHHHHhCCCEEEEEe
Confidence 5655432221 1112222222212 222210012577888887 888777 568899999999998521
Q ss_pred -ccchhhhHHHHHHHh----------cceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 037640 302 -FADQFTNEKLAVHLL----------KIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 302 -~~DQ~~na~~v~~~~----------g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
..=-+.-++++. +. =+|..+-.+ .-.++++++++.|.+++ ++|.|++..+++++..++++
T Consensus 516 ~s~Lty~Iak~Lv-ki~i~yIsLpNIIagr~VvPE-------llqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr 586 (608)
T PRK01021 516 LRPFDTFLAKYIF-KIILPAYSLPNIILGSTIFPE-------FIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDLY 586 (608)
T ss_pred cCHHHHHHHHHHH-hccCCeeehhHHhcCCCcchh-------hcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHH
Confidence 111223455554 31 012222111 00012468999999997 88888866666666666666
Q ss_pred HHH
Q 037640 371 KMA 373 (398)
Q Consensus 371 ~~~ 373 (398)
+.+
T Consensus 587 ~~L 589 (608)
T PRK01021 587 QAM 589 (608)
T ss_pred HHh
Confidence 654
No 67
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=98.10 E-value=0.00012 Score=72.47 Aligned_cols=163 Identities=11% Similarity=0.133 Sum_probs=96.3
Q ss_pred ceEEEeeCCcccCC-HHHHHHHHHHHHhC--CCCEEEEEeCCCCchhhhhccCchhHHHHh----cCCCeEEeecCchhh
Q 037640 195 SVVYACLGSMCNLI-PSQMMELGLGLEAS--NRPFIWVIREGETSKELKKWVVEDGFEERI----KGRGLVIWDWAPQVL 267 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~-~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~v~~~~~~pq~~ 267 (398)
...+++.|...... .+.+.+.+..+.+. +..+.|..-+... ..+.+.+.. ...++...+|+++.+
T Consensus 230 ~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--------~~~~l~~~~~~~~~~~~V~f~G~v~~~e 301 (407)
T cd04946 230 TLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--------LEDTLKELAESKPENISVNFTGELSNSE 301 (407)
T ss_pred CEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--------HHHHHHHHHHhcCCCceEEEecCCChHH
Confidence 35667778776532 33333333333332 2467665433321 111222222 245688899999775
Q ss_pred ---hhcCCCcceeeecCC----chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccc
Q 037640 268 ---ILSHPSVGGFLTHCG----WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLV 340 (398)
Q Consensus 268 ---~L~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~ 340 (398)
++..+++.+||...- -++++||+++|+|+|+.... .....+ +.-+.|..+... -
T Consensus 302 ~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vg----g~~e~i-~~~~~G~l~~~~--------------~ 362 (407)
T cd04946 302 VYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVG----GTPEIV-DNGGNGLLLSKD--------------P 362 (407)
T ss_pred HHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCC----CcHHHh-cCCCcEEEeCCC--------------C
Confidence 444444555775543 46899999999999986533 345555 354478877543 4
Q ss_pred cHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 037640 341 KRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLL 391 (398)
Q Consensus 341 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 391 (398)
+.+++.++|.++++|++....++++|++.- .+.-+......+++
T Consensus 363 ~~~~la~~I~~ll~~~~~~~~m~~~ar~~~-------~~~f~~~~~~~~~~ 406 (407)
T cd04946 363 TPNELVSSLSKFIDNEEEYQTMREKAREKW-------EENFNASKNYREFA 406 (407)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-------HHHcCHHHhHHHhc
Confidence 789999999999988755555555555443 33455455555543
No 68
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.09 E-value=0.0026 Score=60.15 Aligned_cols=148 Identities=15% Similarity=0.133 Sum_probs=88.4
Q ss_pred CceEEEeeCCcccC-CHHHHHHHHHHHHh--CCCCEEEEEeCCCCchhhhhccCchh-HHHHhcCCCeEEeecCchh-hh
Q 037640 194 KSVVYACLGSMCNL-IPSQMMELGLGLEA--SNRPFIWVIREGETSKELKKWVVEDG-FEERIKGRGLVIWDWAPQV-LI 268 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~-~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~v~~~~~~pq~-~~ 268 (398)
+..+++..|+.... ..+.+.+.++.+.+ .+.++++. |....... .... ........++...++..+. .+
T Consensus 187 ~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~-G~~~~~~~-----~~~~~~~~~~~~~~v~~~g~~~~~~~~ 260 (359)
T cd03808 187 DDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV-GDGDEENP-----AAILEIEKLGLEGRVEFLGFRDDVPEL 260 (359)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEE-cCCCcchh-----hHHHHHHhcCCcceEEEeeccccHHHH
Confidence 34677778887653 34444455555543 23444443 33321100 0000 1111124677777775443 57
Q ss_pred hcCCCcceeeecCC----chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHH
Q 037640 269 LSHPSVGGFLTHCG----WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDD 344 (398)
Q Consensus 269 L~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
+..+++ +|.... -++++||+++|+|+|+.+..+ ....+ +..+.|..++.. +.++
T Consensus 261 ~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i-~~~~~g~~~~~~---------------~~~~ 318 (359)
T cd03808 261 LAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAV-IDGVNGFLVPPG---------------DAEA 318 (359)
T ss_pred HHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhh-hcCcceEEECCC---------------CHHH
Confidence 888877 664432 478999999999999965443 34445 356677777543 7899
Q ss_pred HHHHHHHHhccCcchHHHHHHHHHH
Q 037640 345 VKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 345 l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
+.++|.+++.|++..+.+.+++++.
T Consensus 319 ~~~~i~~l~~~~~~~~~~~~~~~~~ 343 (359)
T cd03808 319 LADAIERLIEDPELRARMGQAARKR 343 (359)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 9999999998886555655555554
No 69
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.04 E-value=0.0021 Score=61.61 Aligned_cols=152 Identities=7% Similarity=0.036 Sum_probs=89.1
Q ss_pred ceEEEeeCCcccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCCCchhhhhccCchhHH---HHhc-CCCeEEeecCchh-
Q 037640 195 SVVYACLGSMCNL-IPSQMMELGLGLEAS--NRPFIWVIREGETSKELKKWVVEDGFE---ERIK-GRGLVIWDWAPQV- 266 (398)
Q Consensus 195 ~vv~vs~Gs~~~~-~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~---~~~~-~~~v~~~~~~pq~- 266 (398)
..+++..|+.... ..+.+.+.+..+... +.++++ +|....... +.+.+. .+.. ..++.+.+|.++.
T Consensus 185 ~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~i-vG~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 258 (355)
T cd03819 185 KPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLI-VGDAQGRRF-----YYAELLELIKRLGLQDRVTFVGHCSDMP 258 (355)
T ss_pred ceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEE-EECCcccch-----HHHHHHHHHHHcCCcceEEEcCCcccHH
Confidence 3566777776653 345555566666553 344443 343321111 111111 1112 3578888885533
Q ss_pred hhhcCCCcceeeec--CC-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 267 LILSHPSVGGFLTH--CG-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 267 ~~L~~~~~~~~ith--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
.+++.+++-++-++ -| -++++||+++|+|+|+.-.. .....+ +.-+.|..+... +.+
T Consensus 259 ~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i-~~~~~g~~~~~~---------------~~~ 318 (355)
T cd03819 259 AAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETV-RPGETGLLVPPG---------------DAE 318 (355)
T ss_pred HHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHH-hCCCceEEeCCC---------------CHH
Confidence 57888888444342 23 36999999999999986532 234445 354578777543 889
Q ss_pred HHHHHHHHHh-ccCcchHHHHHHHHHHHHH
Q 037640 344 DVKNAVERLM-DEGNDGEERRNRALNLAKM 372 (398)
Q Consensus 344 ~l~~ai~~vl-~~~~~~~~~~~~a~~l~~~ 372 (398)
++.++|.+++ .++++.++++++|++..+.
T Consensus 319 ~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 319 ALAQALDQILSLLPEGRAKMFAKARMCVET 348 (355)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 9999996555 4676666666666665543
No 70
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.00 E-value=0.0017 Score=63.98 Aligned_cols=95 Identities=14% Similarity=0.101 Sum_probs=67.9
Q ss_pred CCCeEEeecCchh---hhhcCCCcceeee---cCCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCC
Q 037640 254 GRGLVIWDWAPQV---LILSHPSVGGFLT---HCGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVEN 326 (398)
Q Consensus 254 ~~~v~~~~~~pq~---~~L~~~~~~~~it---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 326 (398)
..++.+.+++++. ++++.+++ ||. +-|+ .+++||+++|+|+|+.... .....+ ++-+.|..++.
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~~-- 352 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAV-ADGETGLLVDG-- 352 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhh-ccCCceEECCC--
Confidence 3578898999865 46888887 553 2233 5899999999999996543 233345 35566776654
Q ss_pred CCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 037640 327 PMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
-+.+++.++|.++++|++..+.+++++++..
T Consensus 353 -------------~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~ 383 (405)
T TIGR03449 353 -------------HDPADWADALARLLDDPRTRIRMGAAAVEHA 383 (405)
T ss_pred -------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3789999999999988766666666666544
No 71
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.99 E-value=7e-05 Score=74.01 Aligned_cols=150 Identities=18% Similarity=0.261 Sum_probs=81.0
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHH-hcCCCeEEeecCchhhhhcC
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEER-IKGRGLVIWDWAPQVLILSH 271 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~~pq~~~L~~ 271 (398)
++.++|.||.+....+++.+..-++-|++.+...+|..+....... . +-..+.+. +....+++.++.++.+.|..
T Consensus 283 ~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~--~--l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~ 358 (468)
T PF13844_consen 283 EDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEA--R--LRRRFAAHGVDPDRIIFSPVAPREEHLRR 358 (468)
T ss_dssp SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHH--H--HHHHHHHTTS-GGGEEEEE---HHHHHHH
T ss_pred CCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHH--H--HHHHHHHcCCChhhEEEcCCCCHHHHHHH
Confidence 4459999999999999999999889999999999998875532110 0 21111111 12356777788886654432
Q ss_pred -CCcceee---ecCCchhHHHHHHhCCCEeeccccc-chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHH-H
Q 037640 272 -PSVGGFL---THCGWNSTLEGVCAGLPLLTWPLFA-DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDD-V 345 (398)
Q Consensus 272 -~~~~~~i---thgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~-l 345 (398)
..+.+++ ..+|.+|++|||+.|||+|.+|--. =...-+..+ ..+|+...+.. +.++ +
T Consensus 359 ~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL-~~lGl~ElIA~----------------s~~eYv 421 (468)
T PF13844_consen 359 YQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL-RALGLPELIAD----------------SEEEYV 421 (468)
T ss_dssp GGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH-HHHT-GGGB-S----------------SHHHHH
T ss_pred hhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH-HHcCCchhcCC----------------CHHHHH
Confidence 2222243 4568899999999999999999533 223334455 47777765533 3444 5
Q ss_pred HHHHHHHhccCcchHHHHH
Q 037640 346 KNAVERLMDEGNDGEERRN 364 (398)
Q Consensus 346 ~~ai~~vl~~~~~~~~~~~ 364 (398)
..|+ ++-+|+++...+|+
T Consensus 422 ~~Av-~La~D~~~l~~lR~ 439 (468)
T PF13844_consen 422 EIAV-RLATDPERLRALRA 439 (468)
T ss_dssp HHHH-HHHH-HHHHHHHHH
T ss_pred HHHH-HHhCCHHHHHHHHH
Confidence 5555 56666644444443
No 72
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.97 E-value=0.0039 Score=58.74 Aligned_cols=143 Identities=11% Similarity=0.082 Sum_probs=79.6
Q ss_pred ceEEEeeCCcccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCchh-hhh
Q 037640 195 SVVYACLGSMCNL-IPSQMMELGLGLEAS--NRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQV-LIL 269 (398)
Q Consensus 195 ~vv~vs~Gs~~~~-~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq~-~~L 269 (398)
..+++..|+.... ..+.+.+.++.+... +.++++ +|....... + ....++.. ..++.+.+|.++. .++
T Consensus 189 ~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i-~G~~~~~~~-----~-~~~~~~~~~~~~v~~~g~~~~~~~~~ 261 (353)
T cd03811 189 GPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVI-LGDGPLREE-----L-EALAKELGLADRVHFLGFQSNPYPYL 261 (353)
T ss_pred ceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEE-EcCCccHHH-----H-HHHHHhcCCCccEEEecccCCHHHHH
Confidence 3677777877642 233333344444332 344444 343321111 1 11112222 4678888887754 578
Q ss_pred cCCCcceeeec--CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHH--
Q 037640 270 SHPSVGGFLTH--CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDV-- 345 (398)
Q Consensus 270 ~~~~~~~~ith--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l-- 345 (398)
..+++-++-++ |.-++++||+++|+|+|+.... .....+ +..+.|..++.. +.+.+
T Consensus 262 ~~~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i-~~~~~g~~~~~~---------------~~~~~~~ 321 (353)
T cd03811 262 KAADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREIL-EDGENGLLVPVG---------------DEAALAA 321 (353)
T ss_pred HhCCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHh-cCCCceEEECCC---------------CHHHHHH
Confidence 88887333333 2346899999999999986443 445556 467788877653 56666
Q ss_pred -HHHHHHHhccCcchHHHHH
Q 037640 346 -KNAVERLMDEGNDGEERRN 364 (398)
Q Consensus 346 -~~ai~~vl~~~~~~~~~~~ 364 (398)
.+++.++..+++....+++
T Consensus 322 ~~~~i~~~~~~~~~~~~~~~ 341 (353)
T cd03811 322 AALALLDLLLDPELRERLAA 341 (353)
T ss_pred HHHHHHhccCChHHHHHHHH
Confidence 5566666666644444444
No 73
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.95 E-value=0.00013 Score=70.06 Aligned_cols=145 Identities=17% Similarity=0.136 Sum_probs=92.6
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCC-CCEEEEEeCCCCchhhhhccCchhHHH---H-hcCCCeEEeecCchh---h
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASN-RPFIWVIREGETSKELKKWVVEDGFEE---R-IKGRGLVIWDWAPQV---L 267 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~---~-~~~~~v~~~~~~pq~---~ 267 (398)
.+++..|+.... .....+++++++.. ..+++. |... ..+.+.+ + ....||.+.+|+|+. .
T Consensus 192 ~~i~~~G~~~~~--K~~~~li~a~~~l~~~~l~i~-G~g~---------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~ 259 (357)
T cd03795 192 PFFLFVGRLVYY--KGLDVLLEAAAALPDAPLVIV-GEGP---------LEAELEALAAALGLLDRVRFLGRLDDEEKAA 259 (357)
T ss_pred cEEEEecccccc--cCHHHHHHHHHhccCcEEEEE-eCCh---------hHHHHHHHHHhcCCcceEEEcCCCCHHHHHH
Confidence 566777876542 24555777777665 444443 3222 1112222 1 135789999999975 4
Q ss_pred hhcCCCcceeeec---CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHH-hcceEEeccCCCCCccccccccccccH
Q 037640 268 ILSHPSVGGFLTH---CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHL-LKIGVKIGVENPMTWGEEQNIGVLVKR 342 (398)
Q Consensus 268 ~L~~~~~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~-~g~g~~l~~~~~~~~~~~~~~~~~~~~ 342 (398)
+++.+++-++.++ -|. .+++||+++|+|+|+....+.. ..+ +. -+.|..++. -+.
T Consensus 260 ~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~----~~i-~~~~~~g~~~~~---------------~d~ 319 (357)
T cd03795 260 LLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGG----SYV-NLHGVTGLVVPP---------------GDP 319 (357)
T ss_pred HHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCch----hHH-hhCCCceEEeCC---------------CCH
Confidence 7777777444443 343 4799999999999997544433 333 23 466776654 378
Q ss_pred HHHHHHHHHHhccCcchHHHHHHHHHHHHH
Q 037640 343 DDVKNAVERLMDEGNDGEERRNRALNLAKM 372 (398)
Q Consensus 343 ~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~ 372 (398)
+++.++|.++++|++..+.+++++++..+.
T Consensus 320 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 320 AALAEAIRRLLEDPELRERLGEAARERAEE 349 (357)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
Confidence 999999999999987777777777665443
No 74
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.95 E-value=0.0016 Score=63.31 Aligned_cols=101 Identities=11% Similarity=0.129 Sum_probs=71.9
Q ss_pred CCCeEEeecCchh-hhhcCCCcceeeecC-C-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCc
Q 037640 254 GRGLVIWDWAPQV-LILSHPSVGGFLTHC-G-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTW 330 (398)
Q Consensus 254 ~~~v~~~~~~pq~-~~L~~~~~~~~ithg-G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~ 330 (398)
..++.+.++.++. .++..+++-++.++. | ..+++||+++|+|+|+..... .....+ +.-..|..++.
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v-~~~~~G~lv~~------ 329 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEII-EDGENGYLVPK------ 329 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHc-ccCCCceEeCC------
Confidence 4567777776655 478888885555553 3 469999999999999964321 133344 35567777754
Q ss_pred cccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHH
Q 037640 331 GEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMA 373 (398)
Q Consensus 331 ~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~ 373 (398)
-+.+++.++|.+++.|++....+.+++++..+.+
T Consensus 330 ---------~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 330 ---------GDIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred ---------CcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 3789999999999998877777777777765544
No 75
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.87 E-value=0.00069 Score=67.02 Aligned_cols=112 Identities=13% Similarity=0.122 Sum_probs=74.0
Q ss_pred CCCeEEeecCchhh---hhcCCCcceeee--c-------CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceE
Q 037640 254 GRGLVIWDWAPQVL---ILSHPSVGGFLT--H-------CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGV 320 (398)
Q Consensus 254 ~~~v~~~~~~pq~~---~L~~~~~~~~it--h-------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~ 320 (398)
.+++.+.+|+|+.+ ++..+++ ||. + -|. ++++||+++|+|+|+....+ ....+ +.-..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v-~~~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELV-EADKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhh-cCCCceE
Confidence 46788999999764 6777777 554 2 244 57899999999999975432 33344 3445677
Q ss_pred EeccCCCCCccccccccccccHHHHHHHHHHHhc-cCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 037640 321 KIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMD-EGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDI 394 (398)
Q Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~-~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (398)
.+... +.+++.++|.++++ |++..+.+.+++++..+ +.-+.....+++.+.+
T Consensus 351 lv~~~---------------d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~-------~~f~~~~~~~~l~~~~ 403 (406)
T PRK15427 351 LVPEN---------------DAQALAQRLAAFSQLDTDELAPVVKRAREKVE-------TDFNQQVINRELASLL 403 (406)
T ss_pred EeCCC---------------CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHH
Confidence 77543 78999999999998 77555555555544332 2344445555555443
No 76
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=97.85 E-value=0.012 Score=58.74 Aligned_cols=95 Identities=13% Similarity=0.095 Sum_probs=64.0
Q ss_pred CCCeEEeecCchhhh---hcCC--CcceeeecC---C-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEecc
Q 037640 254 GRGLVIWDWAPQVLI---LSHP--SVGGFLTHC---G-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 254 ~~~v~~~~~~pq~~~---L~~~--~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~ 324 (398)
..++.+.+++++.++ ++.+ +..+||... | -.+++||+++|+|+|+.... .....+ +.-..|..+..
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv-~~~~~G~lv~~ 390 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDII-ANCRNGLLVDV 390 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHh-cCCCcEEEeCC
Confidence 456777788876654 5444 223477643 3 35999999999999997543 344444 34456777754
Q ss_pred CCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHH
Q 037640 325 ENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALN 368 (398)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~ 368 (398)
. +.+++.++|.++++|++....+.+++++
T Consensus 391 ~---------------d~~~la~~i~~ll~~~~~~~~~~~~a~~ 419 (439)
T TIGR02472 391 L---------------DLEAIASALEDALSDSSQWQLWSRNGIE 419 (439)
T ss_pred C---------------CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3 7899999999999887555555555543
No 77
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.85 E-value=0.00021 Score=61.36 Aligned_cols=148 Identities=15% Similarity=0.175 Sum_probs=88.0
Q ss_pred CceEEEeeCCcccC-CHHHHHHHHHHHHh--CCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCch---hh
Q 037640 194 KSVVYACLGSMCNL-IPSQMMELGLGLEA--SNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQ---VL 267 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~-~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq---~~ 267 (398)
+..+++..|+.... ..+.+..++.-+.. .+.-.++.+|....... +-..........++.+.++.++ ..
T Consensus 14 ~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~l~~ 88 (172)
T PF00534_consen 14 KKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKE-----LKNLIEKLNLKENIIFLGYVPDDELDE 88 (172)
T ss_dssp TSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHH-----HHHHHHHTTCGTTEEEEESHSHHHHHH
T ss_pred CCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccccccc-----ccccccccccccccccccccccccccc
Confidence 34677778887763 24444443333332 22223444442211100 1111111112468888889872 24
Q ss_pred hhcCCCcceeeec----CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 268 ILSHPSVGGFLTH----CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 268 ~L~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
++..+++ +|+. +.-.+++||+++|+|+|+.- ...+...+ .....|..++. -+.+
T Consensus 89 ~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~~----~~~~~e~~-~~~~~g~~~~~---------------~~~~ 146 (172)
T PF00534_consen 89 LYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIASD----IGGNNEII-NDGVNGFLFDP---------------NDIE 146 (172)
T ss_dssp HHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEES----STHHHHHS-GTTTSEEEEST---------------TSHH
T ss_pred cccccee--ccccccccccccccccccccccceeecc----ccCCceee-ccccceEEeCC---------------CCHH
Confidence 7778777 7765 45679999999999999854 44455555 46666888864 3899
Q ss_pred HHHHHHHHHhccCcchHHHHHHHHH
Q 037640 344 DVKNAVERLMDEGNDGEERRNRALN 368 (398)
Q Consensus 344 ~l~~ai~~vl~~~~~~~~~~~~a~~ 368 (398)
++.++|.+++++++....+.+++++
T Consensus 147 ~l~~~i~~~l~~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 147 ELADAIEKLLNDPELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHhcC
Confidence 9999999999987666666666654
No 78
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=97.79 E-value=0.011 Score=58.52 Aligned_cols=92 Identities=12% Similarity=0.191 Sum_probs=64.2
Q ss_pred CCeEEe-ecCchhh---hhcCCCcceeee----cCC---chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEec
Q 037640 255 RGLVIW-DWAPQVL---ILSHPSVGGFLT----HCG---WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIG 323 (398)
Q Consensus 255 ~~v~~~-~~~pq~~---~L~~~~~~~~it----hgG---~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~ 323 (398)
.|++.. +|+|..+ +|+.+++ +|. .-| -+.++||+++|+|+|+.... .....+ ++-+.|..+
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv-~~~~~G~lv- 365 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELV-KHGENGLVF- 365 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHh-cCCCCEEEE-
Confidence 466654 5888554 5777777 663 112 34799999999999996432 344455 466678766
Q ss_pred cCCCCCccccccccccccHHHHHHHHHHHhcc---CcchHHHHHHHHHHH
Q 037640 324 VENPMTWGEEQNIGVLVKRDDVKNAVERLMDE---GNDGEERRNRALNLA 370 (398)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~---~~~~~~~~~~a~~l~ 370 (398)
. +.++|.++|.++++| ++..+.+.+++++..
T Consensus 366 -~---------------d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 366 -G---------------DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred -C---------------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 2 578999999999998 666667777766655
No 79
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.79 E-value=0.01 Score=60.32 Aligned_cols=105 Identities=13% Similarity=0.170 Sum_probs=68.4
Q ss_pred CCCeEEeecCchhhhhcCCCcceeee---cCCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCC
Q 037640 254 GRGLVIWDWAPQVLILSHPSVGGFLT---HCGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMT 329 (398)
Q Consensus 254 ~~~v~~~~~~pq~~~L~~~~~~~~it---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 329 (398)
..+|...++.+...++..+++ ||. +=|+ .+++||+++|+|+|+.-.. ..+...+ +.-..|..+....
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~---~G~~eiI-~~g~nG~lv~~~~--- 445 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVN---YGNPTFI-EDNKNGYLIPIDE--- 445 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCC---CCCHHHc-cCCCCEEEEeCCc---
Confidence 456788888888889988888 654 2343 5899999999999997542 1233344 3444677765210
Q ss_pred cccccccccccc-HHHHHHHHHHHhccCcchHHHHHHHHHHHHHH
Q 037640 330 WGEEQNIGVLVK-RDDVKNAVERLMDEGNDGEERRNRALNLAKMA 373 (398)
Q Consensus 330 ~~~~~~~~~~~~-~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~ 373 (398)
++ ++.-+ .++++++|.++++ ++....+.+++++.++.+
T Consensus 446 ---~~--~d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~f 484 (500)
T TIGR02918 446 ---EE--DDEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGF 484 (500)
T ss_pred ---cc--cchhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhc
Confidence 00 00012 7889999999995 545667777777655543
No 80
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.78 E-value=0.0043 Score=60.16 Aligned_cols=203 Identities=16% Similarity=0.123 Sum_probs=103.7
Q ss_pred cCCceeecC-cccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHH---HHh--CC
Q 037640 150 SRDKAWCIG-PVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLG---LEA--SN 223 (398)
Q Consensus 150 ~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~a---l~~--~~ 223 (398)
.+.++.||| |+....+... ......+.+ -.+++++|-+--||-..--...+-.++++ +.+ .+
T Consensus 151 ~g~~~~~VGHPl~d~~~~~~-----------~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~ 218 (373)
T PF02684_consen 151 HGVPVTYVGHPLLDEVKPEP-----------DRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPD 218 (373)
T ss_pred cCCCeEEECCcchhhhccCC-----------CHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 457899999 8865432111 122333333 22355689998999776222222223333 333 35
Q ss_pred CCEEEEEeCCCCchhhhhccCchhHHHHh--cCCCeEEee-cCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecc
Q 037640 224 RPFIWVIREGETSKELKKWVVEDGFEERI--KGRGLVIWD-WAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 224 ~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~v~~~~-~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P 300 (398)
.+|++...... ..+-+.+.. ...++.+.. .-.-.+++..+++ .+.-+| ..|+|+...|+|||++=
T Consensus 219 l~fvvp~a~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Y 286 (373)
T PF02684_consen 219 LQFVVPVAPEV---------HEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAY 286 (373)
T ss_pred eEEEEecCCHH---------HHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEE
Confidence 56666553321 111111111 122233221 2234567877777 666666 57899999999999862
Q ss_pred c-ccchhhhHHHHHHHhcceEEec---cCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Q 037640 301 L-FADQFTNEKLAVHLLKIGVKIG---VENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMA 376 (398)
Q Consensus 301 ~-~~DQ~~na~~v~~~~g~g~~l~---~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~ 376 (398)
- ..=-+.-|++++ +... +.+. .++. -. -+=.+++.+++.|.+++.+++.|++. ++..+...+.++..
T Consensus 287 k~~~lt~~iak~lv-k~~~-isL~Niia~~~-v~--PEliQ~~~~~~~i~~~~~~ll~~~~~----~~~~~~~~~~~~~~ 357 (373)
T PF02684_consen 287 KVSPLTYFIAKRLV-KVKY-ISLPNIIAGRE-VV--PELIQEDATPENIAAELLELLENPEK----RKKQKELFREIRQL 357 (373)
T ss_pred cCcHHHHHHHHHhh-cCCE-eechhhhcCCC-cc--hhhhcccCCHHHHHHHHHHHhcCHHH----HHHHHHHHHHHHHh
Confidence 2 122334455554 2221 1110 0000 00 01112468999999999999998843 44444444444444
Q ss_pred HhcCCchHH
Q 037640 377 IQEGGSSHL 385 (398)
Q Consensus 377 ~~~~g~~~~ 385 (398)
...|.++..
T Consensus 358 ~~~~~~~~~ 366 (373)
T PF02684_consen 358 LGPGASSRA 366 (373)
T ss_pred hhhccCCHH
Confidence 444555444
No 81
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.78 E-value=0.0002 Score=69.03 Aligned_cols=136 Identities=13% Similarity=0.142 Sum_probs=87.6
Q ss_pred EEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchh---hhhcCCCc
Q 037640 198 YACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQV---LILSHPSV 274 (398)
Q Consensus 198 ~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~---~~L~~~~~ 274 (398)
++..|++.. ......++++++..+.++++. |... ..+.+.+ ....||.+.+++|+. .+++.+++
T Consensus 198 il~~G~~~~--~K~~~~li~a~~~~~~~l~iv-G~g~---------~~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~ 264 (351)
T cd03804 198 YLSVGRLVP--YKRIDLAIEAFNKLGKRLVVI-GDGP---------ELDRLRA-KAGPNVTFLGRVSDEELRDLYARARA 264 (351)
T ss_pred EEEEEcCcc--ccChHHHHHHHHHCCCcEEEE-ECCh---------hHHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCE
Confidence 455666654 234566778888777776654 4332 1122222 336889999999984 46878887
Q ss_pred ceeeecCCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHh
Q 037640 275 GGFLTHCGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLM 353 (398)
Q Consensus 275 ~~~ithgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 353 (398)
-++-+.-|+ .+++||+++|+|+|+....+ ....+ +.-+.|..++.. +.+++.++|.+++
T Consensus 265 ~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i-~~~~~G~~~~~~---------------~~~~la~~i~~l~ 324 (351)
T cd03804 265 FLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETV-IDGVTGILFEEQ---------------TVESLAAAVERFE 324 (351)
T ss_pred EEECCcCCCCchHHHHHHcCCCEEEeCCCC----Cccee-eCCCCEEEeCCC---------------CHHHHHHHHHHHH
Confidence 333344444 46789999999999986533 23334 355678877643 7888999999999
Q ss_pred ccC-cchHHHHHHH
Q 037640 354 DEG-NDGEERRNRA 366 (398)
Q Consensus 354 ~~~-~~~~~~~~~a 366 (398)
+|+ ..++.+++++
T Consensus 325 ~~~~~~~~~~~~~~ 338 (351)
T cd03804 325 KNEDFDPQAIRAHA 338 (351)
T ss_pred hCcccCHHHHHHHH
Confidence 887 3334444444
No 82
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.77 E-value=0.0016 Score=64.48 Aligned_cols=144 Identities=12% Similarity=0.054 Sum_probs=89.4
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhC----CCCEEEEEeCCCCchhhhhccCchhHHH---HhcCCCeEEeecCchhh-
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEAS----NRPFIWVIREGETSKELKKWVVEDGFEE---RIKGRGLVIWDWAPQVL- 267 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~v~~~~~~pq~~- 267 (398)
.+++..|+.... ..+..+++|++.. +.+++ .+|... ..+.+.+ ...-.|+.+.+|+|+.+
T Consensus 230 ~~i~~~G~l~~~--kg~~~li~a~~~l~~~~~~~l~-ivG~g~---------~~~~l~~~~~~~~l~~v~f~G~~~~~~~ 297 (412)
T PRK10307 230 KIVLYSGNIGEK--QGLELVIDAARRLRDRPDLIFV-ICGQGG---------GKARLEKMAQCRGLPNVHFLPLQPYDRL 297 (412)
T ss_pred EEEEEcCccccc--cCHHHHHHHHHHhccCCCeEEE-EECCCh---------hHHHHHHHHHHcCCCceEEeCCCCHHHH
Confidence 566667877642 2344455555432 23444 344332 1122222 22235799999998654
Q ss_pred --hhcCCCcceeeecCCc------hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCcccccccccc
Q 037640 268 --ILSHPSVGGFLTHCGW------NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVL 339 (398)
Q Consensus 268 --~L~~~~~~~~ithgG~------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~ 339 (398)
+++.+++-++.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|..++..
T Consensus 298 ~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~~~-------------- 358 (412)
T PRK10307 298 PALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVEPE-------------- 358 (412)
T ss_pred HHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeCCC--------------
Confidence 6888888555555442 2478999999999998654311 12233 3 778877653
Q ss_pred ccHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Q 037640 340 VKRDDVKNAVERLMDEGNDGEERRNRALNLAK 371 (398)
Q Consensus 340 ~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~ 371 (398)
+.+++.++|.++++|++..+.+++++++..+
T Consensus 359 -d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~ 389 (412)
T PRK10307 359 -SVEALVAAIAALARQALLRPKLGTVAREYAE 389 (412)
T ss_pred -CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 7899999999999888666777777776543
No 83
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.76 E-value=0.016 Score=60.83 Aligned_cols=96 Identities=20% Similarity=0.238 Sum_probs=63.3
Q ss_pred CCCeEEeecCchh-hhhcCCCcceeee---cCCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 254 GRGLVIWDWAPQV-LILSHPSVGGFLT---HCGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 254 ~~~v~~~~~~pq~-~~L~~~~~~~~it---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
.++|.+.+|.++. .++..+++ ||. +-|+ ++++||+++|+|+|+.... .....+ +.-..|..+...
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV-~dg~~GlLv~~~--- 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAV-QEGVTGLTLPAD--- 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHc-cCCCCEEEeCCC---
Confidence 4678888887754 47777777 554 4454 7999999999999997643 234445 344468877654
Q ss_pred CccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
+.+.+++.+++.+++.+......+++++++.
T Consensus 643 ----------d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~ 673 (694)
T PRK15179 643 ----------TVTAPDVAEALARIHDMCAADPGIARKAADW 673 (694)
T ss_pred ----------CCChHHHHHHHHHHHhChhccHHHHHHHHHH
Confidence 3566778888877765433333555554443
No 84
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.72 E-value=0.025 Score=57.16 Aligned_cols=93 Identities=14% Similarity=0.139 Sum_probs=64.4
Q ss_pred CCCeEEeecCchhhhhcCCCcceeeecC---C-chhHHHHHHhCCCEeecccccchhhhHHHHHHHh------cceEEec
Q 037640 254 GRGLVIWDWAPQVLILSHPSVGGFLTHC---G-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLL------KIGVKIG 323 (398)
Q Consensus 254 ~~~v~~~~~~pq~~~L~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~------g~g~~l~ 323 (398)
..+|.+.+...-.++++.+++ +|.-. | -++++||+++|+|+|+... ......+ +.. ..|..+.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv-~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELI-EGADDEALGPAGEVVP 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHh-cCCcccccCCceEEEC
Confidence 467888775556678877777 55332 2 4689999999999999533 3334444 342 2677665
Q ss_pred cCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHH
Q 037640 324 VENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALN 368 (398)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~ 368 (398)
. -+.+++.++|.++++|++..+.+.+++++
T Consensus 426 ~---------------~d~~~la~ai~~ll~~~~~~~~~~~~a~~ 455 (475)
T cd03813 426 P---------------ADPEALARAILRLLKDPELRRAMGEAGRK 455 (475)
T ss_pred C---------------CCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4 37899999999999988666666665554
No 85
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.72 E-value=0.0045 Score=60.31 Aligned_cols=131 Identities=15% Similarity=0.247 Sum_probs=79.0
Q ss_pred CceEEEeeCCcc--c-CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCc---hh
Q 037640 194 KSVVYACLGSMC--N-LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAP---QV 266 (398)
Q Consensus 194 ~~vv~vs~Gs~~--~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~p---q~ 266 (398)
++.|+|.+=... . ...+.+.++++++.+.+.++++.+........ . +-+.+.+... .+|+.+.+-++ ..
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~--~--i~~~i~~~~~~~~~v~l~~~l~~~~~l 276 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSR--I--INEAIEEYVNEHPNFRLFKSLGQERYL 276 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCch--H--HHHHHHHHhcCCCCEEEECCCChHHHH
Confidence 358888875543 3 44677889999998877666665532211000 0 1112222222 46788876555 44
Q ss_pred hhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHH
Q 037640 267 LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVK 346 (398)
Q Consensus 267 ~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 346 (398)
.++.++.+ +||-++.+- .||.+.|+|.|.+ .+-+ ... +.|..+.+- . .++++|.
T Consensus 277 ~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l---~~R~----e~~-~~g~nvl~v-g--------------~~~~~I~ 330 (365)
T TIGR03568 277 SLLKNADA--VIGNSSSGI-IEAPSFGVPTINI---GTRQ----KGR-LRADSVIDV-D--------------PDKEEIV 330 (365)
T ss_pred HHHHhCCE--EEEcChhHH-HhhhhcCCCEEee---cCCc----hhh-hhcCeEEEe-C--------------CCHHHHH
Confidence 57888888 998875444 9999999999977 3211 111 234333321 2 4789999
Q ss_pred HHHHHHhc
Q 037640 347 NAVERLMD 354 (398)
Q Consensus 347 ~ai~~vl~ 354 (398)
+++.++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999553
No 86
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.69 E-value=0.019 Score=56.02 Aligned_cols=93 Identities=13% Similarity=0.074 Sum_probs=65.2
Q ss_pred CCCeEEeecCchh---hhhcCCCcceeeec---CC-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCC
Q 037640 254 GRGLVIWDWAPQV---LILSHPSVGGFLTH---CG-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVEN 326 (398)
Q Consensus 254 ~~~v~~~~~~pq~---~~L~~~~~~~~ith---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 326 (398)
..++.+.+++|+. .++..+++ ++.. -| -.+++||+++|+|+|+.-.. .....+ ..-+.|..+.
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~e~i-~~~~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPLETV-VDGETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCC----CcHHHh-ccCCceEEeC---
Confidence 4689999999976 46777777 5532 12 25789999999999997432 233344 3445666552
Q ss_pred CCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 327 PMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
.+.+++.++|.++++|++....+.+++++.
T Consensus 349 -------------~~~~~~a~~i~~l~~~~~~~~~~~~~a~~~ 378 (392)
T cd03805 349 -------------PTPEEFAEAMLKLANDPDLADRMGAAGRKR 378 (392)
T ss_pred -------------CCHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 267899999999999886666666666554
No 87
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.69 E-value=0.0014 Score=62.57 Aligned_cols=94 Identities=13% Similarity=0.050 Sum_probs=65.1
Q ss_pred CCCeEEeecCchhh---hhcCCCcceeeec-CC-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 254 GRGLVIWDWAPQVL---ILSHPSVGGFLTH-CG-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 254 ~~~v~~~~~~pq~~---~L~~~~~~~~ith-gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
..++.+.+|+++.+ ++..+++-++-++ .| -++++||+++|+|+|+.+.. .....+ .. +.|.....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~----~~~~~~-~~-~~~~~~~~---- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKV----PWQELI-EY-GCGWVVDD---- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCC----CHHHHh-hc-CceEEeCC----
Confidence 47889999999654 5777777333333 22 46899999999999997543 334445 34 77766543
Q ss_pred CccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
+.+++.++|.++++|++..+.+.+++++.
T Consensus 331 ------------~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 ------------DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ------------ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 34999999999998875555666666555
No 88
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.67 E-value=0.023 Score=61.69 Aligned_cols=98 Identities=15% Similarity=0.154 Sum_probs=67.4
Q ss_pred CCCeEEeecCchhh---hhcCCC--cceeeec---CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEecc
Q 037640 254 GRGLVIWDWAPQVL---ILSHPS--VGGFLTH---CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 254 ~~~v~~~~~~pq~~---~L~~~~--~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~ 324 (398)
..+|.+.+++++.+ ++..++ .++||.- =|+ .+++||+++|+|+|+....+ ....+ +.-..|..++.
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLVdP 621 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLVDP 621 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEECC
Confidence 45677778888765 454442 2347764 233 59999999999999986432 22233 34456777754
Q ss_pred CCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Q 037640 325 ENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAK 371 (398)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~ 371 (398)
-+.++|.++|.++++|++....+.+++++..+
T Consensus 622 ---------------~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~ 653 (1050)
T TIGR02468 622 ---------------HDQQAIADALLKLVADKQLWAECRQNGLKNIH 653 (1050)
T ss_pred ---------------CCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 37899999999999988777777777766543
No 89
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.66 E-value=0.0049 Score=58.92 Aligned_cols=93 Identities=17% Similarity=0.218 Sum_probs=61.4
Q ss_pred CCCeEEeecCchh---hhhcCCCcceeeec--CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 254 GRGLVIWDWAPQV---LILSHPSVGGFLTH--CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 254 ~~~v~~~~~~pq~---~~L~~~~~~~~ith--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
..++...+|+|+. .+++.+++-++-+. +.-++++||+++|+|+|+....+ ....+ + ..|..+..
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~~---- 320 (365)
T cd03809 252 GDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFDP---- 320 (365)
T ss_pred CCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeCC----
Confidence 5788999999876 46777776332222 22458999999999999865421 11122 2 23444443
Q ss_pred CccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHH
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALN 368 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~ 368 (398)
-+.+++.++|.++++|++....+.+++++
T Consensus 321 -----------~~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 349 (365)
T cd03809 321 -----------LDPEALAAAIERLLEDPALREELRERGLA 349 (365)
T ss_pred -----------CCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 37899999999999988655566555553
No 90
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.64 E-value=0.0034 Score=59.65 Aligned_cols=89 Identities=18% Similarity=0.202 Sum_probs=59.5
Q ss_pred CCeEEeecCch-hhhhcCCCcceeeecCC----chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCC
Q 037640 255 RGLVIWDWAPQ-VLILSHPSVGGFLTHCG----WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMT 329 (398)
Q Consensus 255 ~~v~~~~~~pq-~~~L~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 329 (398)
.++.+.+...+ ..+++.+++ +|.... -+++.||+++|+|+|+... ..+...+ +. .|..+...
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~----~~~~e~~-~~--~g~~~~~~---- 317 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDV----GDNAELV-GD--TGFLVPPG---- 317 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCC----CChHHHh-hc--CCEEeCCC----
Confidence 45666554443 357888887 665544 3799999999999998543 3445555 34 56666543
Q ss_pred ccccccccccccHHHHHHHHHHHhccCcchHHHHHHHH
Q 037640 330 WGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRAL 367 (398)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~ 367 (398)
+.+++.++|.++++|++....+.++++
T Consensus 318 -----------~~~~l~~~i~~l~~~~~~~~~~~~~~~ 344 (365)
T cd03807 318 -----------DPEALAEAIEALLADPALRQALGEAAR 344 (365)
T ss_pred -----------CHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 689999999999987744444444433
No 91
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=97.63 E-value=0.0061 Score=58.26 Aligned_cols=214 Identities=19% Similarity=0.193 Sum_probs=113.8
Q ss_pred hccHHHHHHHHhhcCCceeecC-cccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccC---CHHHH
Q 037640 137 ELEPAYVKEYKKISRDKAWCIG-PVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNL---IPSQM 212 (398)
Q Consensus 137 ~le~~~~~~~~~~~~~~v~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~---~~~~~ 212 (398)
.+|+.+++. .+-+..||| |+....+-.+ +.+...+-+....++.++.+--||-..- -..-+
T Consensus 145 PFE~~~y~k----~g~~~~yVGHpl~d~i~~~~-----------~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f 209 (381)
T COG0763 145 PFEPAFYDK----FGLPCTYVGHPLADEIPLLP-----------DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPF 209 (381)
T ss_pred CCCHHHHHh----cCCCeEEeCChhhhhccccc-----------cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHH
Confidence 355554332 334588999 7765433111 1334444454445566899999998761 12333
Q ss_pred HHHHHHHHh--CCCCEEEEEeCCCCchhhhhccCchhHHHHh-cC----CCeEEeecCchhhhhcCCCcceeeecCCchh
Q 037640 213 MELGLGLEA--SNRPFIWVIREGETSKELKKWVVEDGFEERI-KG----RGLVIWDWAPQVLILSHPSVGGFLTHCGWNS 285 (398)
Q Consensus 213 ~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~----~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s 285 (398)
...++.++. .+.+|+..+..... +...... +. .+.++.+--- .+++..+++ .+.-+| .-
T Consensus 210 ~~a~~~l~~~~~~~~~vlp~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~a~~~aD~--al~aSG-T~ 275 (381)
T COG0763 210 VQAAQELKARYPDLKFVLPLVNAKY----------RRIIEEALKWEVAGLSLILIDGEK-RKAFAAADA--ALAASG-TA 275 (381)
T ss_pred HHHHHHHHhhCCCceEEEecCcHHH----------HHHHHHHhhccccCceEEecCchH-HHHHHHhhH--HHHhcc-HH
Confidence 344444442 46788776644321 1111111 11 2222221111 135555555 666666 45
Q ss_pred HHHHHHhCCCEeecccc-cchhhhHHHHHHHhc--------ceEEeccCCCCCccccccccccccHHHHHHHHHHHhccC
Q 037640 286 TLEGVCAGLPLLTWPLF-ADQFTNEKLAVHLLK--------IGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEG 356 (398)
Q Consensus 286 ~~eal~~GvP~l~~P~~-~DQ~~na~~v~~~~g--------~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 356 (398)
++|+..+|+|||+.=-. .=-+.-+++.. +.. +|..+-.+ =.+..++++.|.+++.+++.|+
T Consensus 276 tLE~aL~g~P~Vv~Yk~~~it~~iak~lv-k~~yisLpNIi~~~~ivPE---------liq~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 276 TLEAALAGTPMVVAYKVKPITYFIAKRLV-KLPYVSLPNILAGREIVPE---------LIQEDCTPENLARALEELLLNG 345 (381)
T ss_pred HHHHHHhCCCEEEEEeccHHHHHHHHHhc-cCCcccchHHhcCCccchH---------HHhhhcCHHHHHHHHHHHhcCh
Confidence 78999999999985211 00112233332 221 11111111 1123588999999999999988
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 037640 357 NDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQD 393 (398)
Q Consensus 357 ~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 393 (398)
+..+.+.+...++++.++ +++++....+.+++.
T Consensus 346 ~~~~~~~~~~~~l~~~l~----~~~~~e~aA~~vl~~ 378 (381)
T COG0763 346 DRREALKEKFRELHQYLR----EDPASEIAAQAVLEL 378 (381)
T ss_pred HhHHHHHHHHHHHHHHHc----CCcHHHHHHHHHHHH
Confidence 666777777777777764 344555555555544
No 92
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.61 E-value=0.0027 Score=61.56 Aligned_cols=148 Identities=13% Similarity=0.172 Sum_probs=84.8
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCCCCE-EEEEeCCCCchhhhhccCchhHHHHh-cCCCeEEeecCch--h---hh
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASNRPF-IWVIREGETSKELKKWVVEDGFEERI-KGRGLVIWDWAPQ--V---LI 268 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~-i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~pq--~---~~ 268 (398)
.+++..|.........+..+++++......+ ++.+|....... +- ...+.. ...++.+.+|.++ . +.
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~-----l~-~~~~~~~l~~~v~f~G~~~~~~~~~~~~ 254 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGSDFEK-----CK-AYSRELGIEQRIIWHGWQSQPWEVVQQK 254 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCccHHH-----HH-HHHHHcCCCCeEEEecccCCcHHHHHHH
Confidence 4566777765322334566777776643232 333444332111 11 111111 2468989898754 2 23
Q ss_pred hcCCCcceeee--c--CCchhHHHHHHhCCCEeecc-cccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 269 LSHPSVGGFLT--H--CGWNSTLEGVCAGLPLLTWP-LFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 269 L~~~~~~~~it--h--gG~~s~~eal~~GvP~l~~P-~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
++.+++ +|. + |--+++.||+++|+|+|+.- ..+ ....+ +.-..|..+.. -+.+
T Consensus 255 ~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv-~~~~~G~lv~~---------------~d~~ 312 (359)
T PRK09922 255 IKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII-KPGLNGELYTP---------------GNID 312 (359)
T ss_pred HhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc-cCCCceEEECC---------------CCHH
Confidence 444555 553 3 22479999999999999875 322 22234 35556777754 3899
Q ss_pred HHHHHHHHHhccCcc--hHHHHHHHHHHHH
Q 037640 344 DVKNAVERLMDEGND--GEERRNRALNLAK 371 (398)
Q Consensus 344 ~l~~ai~~vl~~~~~--~~~~~~~a~~l~~ 371 (398)
++.++|.++++|++. ...++++++++.+
T Consensus 313 ~la~~i~~l~~~~~~~~~~~~~~~~~~~~~ 342 (359)
T PRK09922 313 EFVGKLNKVISGEVKYQHDAIPNSIERFYE 342 (359)
T ss_pred HHHHHHHHHHhCcccCCHHHHHHHHHHhhH
Confidence 999999999998852 3444444444444
No 93
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.59 E-value=0.064 Score=52.76 Aligned_cols=131 Identities=11% Similarity=0.120 Sum_probs=74.2
Q ss_pred ceEEEeeCCcccC-CHHHHHHHHHHHHh--CCCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCchhh---
Q 037640 195 SVVYACLGSMCNL-IPSQMMELGLGLEA--SNRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQVL--- 267 (398)
Q Consensus 195 ~vv~vs~Gs~~~~-~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq~~--- 267 (398)
..+++..|..... ..+.+.+.+..+.+ .+.++++ +|....... + ....++.. .+++.+.+|+|+.+
T Consensus 193 ~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~~~~~-----l-~~~~~~~~l~~~v~~~G~~~~~~~~~ 265 (398)
T cd03796 193 KITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFII-GGDGPKRIL-----L-EEMREKYNLQDRVELLGAVPHERVRD 265 (398)
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEE-EeCCchHHH-----H-HHHHHHhCCCCeEEEeCCCCHHHHHH
Confidence 3677777776552 23444444444433 2344444 343321111 1 11112222 45688889998654
Q ss_pred hhcCCCcceeee--c-CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 268 ILSHPSVGGFLT--H-CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 268 ~L~~~~~~~~it--h-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
+++.+++ ||. . -|. .+++||+++|+|+|+.+..+ ....+ +. |.+ .+. . -+.+
T Consensus 266 ~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~-~~~-~--------------~~~~ 321 (398)
T cd03796 266 VLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMI-LLA-E--------------PDVE 321 (398)
T ss_pred HHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-Cce-eec-C--------------CCHH
Confidence 6777777 553 2 243 49999999999999977643 22233 22 333 222 2 2679
Q ss_pred HHHHHHHHHhccC
Q 037640 344 DVKNAVERLMDEG 356 (398)
Q Consensus 344 ~l~~ai~~vl~~~ 356 (398)
++.+++.+++++.
T Consensus 322 ~l~~~l~~~l~~~ 334 (398)
T cd03796 322 SIVRKLEEAISIL 334 (398)
T ss_pred HHHHHHHHHHhCh
Confidence 9999999998764
No 94
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.55 E-value=0.0012 Score=60.18 Aligned_cols=133 Identities=16% Similarity=0.205 Sum_probs=95.0
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHh-cCCCeEEeecCchh-hhhcCCC
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERI-KGRGLVIWDWAPQV-LILSHPS 273 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~pq~-~~L~~~~ 273 (398)
-|+|++|-.-. .....+++..|.+.++.+-.+++...+ .+.....+. +.+|+........+ .++..++
T Consensus 160 ~ilI~lGGsDp--k~lt~kvl~~L~~~~~nl~iV~gs~~p--------~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d 229 (318)
T COG3980 160 DILITLGGSDP--KNLTLKVLAELEQKNVNLHIVVGSSNP--------TLKNLRKRAEKYPNINLYIDTNDMAELMKEAD 229 (318)
T ss_pred eEEEEccCCCh--hhhHHHHHHHhhccCeeEEEEecCCCc--------chhHHHHHHhhCCCeeeEecchhHHHHHHhcc
Confidence 48898875442 223457888888877777677764432 222333333 35777776555544 4888888
Q ss_pred cceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHh
Q 037640 274 VGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLM 353 (398)
Q Consensus 274 ~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 353 (398)
+ .|+-+| .|++|++.-|+|.+++|+...|.-.|... +.+|+-..++.. +.......-+.+++
T Consensus 230 ~--aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f-~~lg~~~~l~~~--------------l~~~~~~~~~~~i~ 291 (318)
T COG3980 230 L--AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEF-EALGIIKQLGYH--------------LKDLAKDYEILQIQ 291 (318)
T ss_pred h--heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHH-HhcCchhhccCC--------------CchHHHHHHHHHhh
Confidence 8 999888 58999999999999999999999999999 588888777653 55666666666778
Q ss_pred ccC
Q 037640 354 DEG 356 (398)
Q Consensus 354 ~~~ 356 (398)
+|.
T Consensus 292 ~d~ 294 (318)
T COG3980 292 KDY 294 (318)
T ss_pred hCH
Confidence 766
No 95
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.53 E-value=0.0055 Score=58.85 Aligned_cols=94 Identities=18% Similarity=0.190 Sum_probs=64.0
Q ss_pred CCCeEEeecCc-hh---hhhcCCCcceeeecCC----chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccC
Q 037640 254 GRGLVIWDWAP-QV---LILSHPSVGGFLTHCG----WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVE 325 (398)
Q Consensus 254 ~~~v~~~~~~p-q~---~~L~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 325 (398)
..++...+|++ +. .+++.+++ +|.-.. .++++||+++|+|+|+.... .....+ ...+.|..+..
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~-~~~~~g~~~~~- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIV-DHGVTGYLAKP- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhhe-eCCCceEEeCC-
Confidence 45788889998 43 46777777 776532 47999999999999986543 222334 24446666643
Q ss_pred CCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 326 NPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
.+.+++.+++.++++|++....+.+++++.
T Consensus 315 --------------~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 344 (365)
T cd03825 315 --------------GDPEDLAEGIEWLLADPDEREELGEAAREL 344 (365)
T ss_pred --------------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 378899999999998875444555555443
No 96
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.45 E-value=0.0026 Score=51.38 Aligned_cols=107 Identities=16% Similarity=0.157 Sum_probs=69.4
Q ss_pred EEEeeCCcccCCHHHH--H-HHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeec--Cc-hhhhhc
Q 037640 197 VYACLGSMCNLIPSQM--M-ELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDW--AP-QVLILS 270 (398)
Q Consensus 197 v~vs~Gs~~~~~~~~~--~-~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~--~p-q~~~L~ 270 (398)
+||+-||... +...+ + ++..-.+....++|..+|.... .|- ++..+.+| .+ -+.+..
T Consensus 2 ifVTvGstf~-~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~--------kpv--------agl~v~~F~~~~kiQsli~ 64 (161)
T COG5017 2 IFVTVGSTFY-PFNRLVLKIEVLELTELIQEELIVQYGNGDI--------KPV--------AGLRVYGFDKEEKIQSLIH 64 (161)
T ss_pred eEEEecCccc-hHHHHHhhHHHHHHHHHhhhheeeeecCCCc--------ccc--------cccEEEeechHHHHHHHhh
Confidence 7899999854 21111 1 2333233345689999987532 220 23344443 34 334666
Q ss_pred CCCcceeeecCCchhHHHHHHhCCCEeecccc--------cchhhhHHHHHHHhcceEEec
Q 037640 271 HPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLF--------ADQFTNEKLAVHLLKIGVKIG 323 (398)
Q Consensus 271 ~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~--------~DQ~~na~~v~~~~g~g~~l~ 323 (398)
.+++ +|+|||.||++.++..++|.|++|-- .+|-.-|..++ +.+.=+...
T Consensus 65 darI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kla-e~~~vv~~s 122 (161)
T COG5017 65 DARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLA-EINYVVACS 122 (161)
T ss_pred cceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHH-hcCceEEEc
Confidence 6776 99999999999999999999999953 35777777775 666555554
No 97
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.39 E-value=0.00063 Score=55.82 Aligned_cols=127 Identities=19% Similarity=0.240 Sum_probs=67.4
Q ss_pred eEEEeeCCccc-CCHHHHHH-HHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchh-hhhcCC
Q 037640 196 VVYACLGSMCN-LIPSQMME-LGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQV-LILSHP 272 (398)
Q Consensus 196 vv~vs~Gs~~~-~~~~~~~~-~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~-~~L~~~ 272 (398)
+.++++|+... ...+.+.+ +++.+.+...++-+.+-+.. |+.+.+. ...|+...+|+++. ++++.+
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~----------~~~l~~~-~~~~v~~~g~~~e~~~~l~~~ 71 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNG----------PDELKRL-RRPNVRFHGFVEELPEILAAA 71 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECES----------S-HHCCH-HHCTEEEE-S-HHHHHHHHC-
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCC----------HHHHHHh-cCCCEEEcCCHHHHHHHHHhC
Confidence 34555666654 34444444 66666543223433332221 1111111 24699999998744 578888
Q ss_pred Ccceeeec--CC-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHH
Q 037640 273 SVGGFLTH--CG-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAV 349 (398)
Q Consensus 273 ~~~~~ith--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai 349 (398)
++.+..+. -| -+.+.|++++|+|+|+.+.. ....+ +..+.|..+ . -+.+++.++|
T Consensus 72 dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~-~~~~~~~~~-~---------------~~~~~l~~~i 129 (135)
T PF13692_consen 72 DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIV-EEDGCGVLV-A---------------NDPEELAEAI 129 (135)
T ss_dssp SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE--T---------------T-HHHHHHHH
T ss_pred CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhhe-eecCCeEEE-C---------------CCHHHHHHHH
Confidence 88766553 23 48999999999999998761 12233 346777766 3 3899999999
Q ss_pred HHHhcc
Q 037640 350 ERLMDE 355 (398)
Q Consensus 350 ~~vl~~ 355 (398)
.++++|
T Consensus 130 ~~l~~d 135 (135)
T PF13692_consen 130 ERLLND 135 (135)
T ss_dssp HHHHH-
T ss_pred HHHhcC
Confidence 998864
No 98
>PLN02949 transferase, transferring glycosyl groups
Probab=97.37 E-value=0.077 Score=53.38 Aligned_cols=96 Identities=11% Similarity=0.032 Sum_probs=58.9
Q ss_pred CCCeEEeecCchhh---hhcCCCcceeee---cCCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHH-hc-ceEEecc
Q 037640 254 GRGLVIWDWAPQVL---ILSHPSVGGFLT---HCGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHL-LK-IGVKIGV 324 (398)
Q Consensus 254 ~~~v~~~~~~pq~~---~L~~~~~~~~it---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~-~g-~g~~l~~ 324 (398)
.++|.+.+++|+.+ +|+.+.+ +|. +=|+ .++.||+++|+|+|+....+-- ...+.+. .| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC--
Confidence 46788889998664 6777776 552 2233 3899999999999998543210 0011000 01 12211
Q ss_pred CCCCCccccccccccccHHHHHHHHHHHhcc-CcchHHHHHHHHHHHH
Q 037640 325 ENPMTWGEEQNIGVLVKRDDVKNAVERLMDE-GNDGEERRNRALNLAK 371 (398)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~-~~~~~~~~~~a~~l~~ 371 (398)
-+.+++.++|.+++++ ++..+.+.+++++..+
T Consensus 407 ---------------~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~ 439 (463)
T PLN02949 407 ---------------TTVEEYADAILEVLRMRETERLEIAAAARKRAN 439 (463)
T ss_pred ---------------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 2678999999999974 4445566666665443
No 99
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.36 E-value=0.013 Score=57.27 Aligned_cols=82 Identities=12% Similarity=0.164 Sum_probs=58.5
Q ss_pred CCCeEEeecCchhh---hhcCCCcceeeec----CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccC
Q 037640 254 GRGLVIWDWAPQVL---ILSHPSVGGFLTH----CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVE 325 (398)
Q Consensus 254 ~~~v~~~~~~pq~~---~L~~~~~~~~ith----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 325 (398)
+.++.+.+++|+.+ +++.+++ ||.. -|. .+++||+++|+|+|+.... .+...+ +.-..|..+...
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv-~~~~~G~~l~~~ 328 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFV-LEGITGYHLAEP 328 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhc-ccCCceEEEeCC
Confidence 45788889998654 5877887 6643 333 5789999999999997653 233444 355567655332
Q ss_pred CCCCccccccccccccHHHHHHHHHHHhccC
Q 037640 326 NPMTWGEEQNIGVLVKRDDVKNAVERLMDEG 356 (398)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 356 (398)
.+.+++.++|.++++|+
T Consensus 329 --------------~d~~~la~~I~~ll~d~ 345 (380)
T PRK15484 329 --------------MTSDSIISDINRTLADP 345 (380)
T ss_pred --------------CCHHHHHHHHHHHHcCH
Confidence 47899999999999876
No 100
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.33 E-value=0.006 Score=59.28 Aligned_cols=92 Identities=12% Similarity=0.103 Sum_probs=61.2
Q ss_pred CCeEEeecCch-hhhhcCCCcceee--ec--CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCC
Q 037640 255 RGLVIWDWAPQ-VLILSHPSVGGFL--TH--CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMT 329 (398)
Q Consensus 255 ~~v~~~~~~pq-~~~L~~~~~~~~i--th--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 329 (398)
.++.+.++..+ ..++..+++ +| ++ |--++++||+++|+|+|+.... .+...+ +.-..|..++..
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i-~~~~~g~~~~~~---- 323 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELV-QHGVTGALVPPG---- 323 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHh-cCCCceEEeCCC----
Confidence 44555554433 367888887 55 33 3346999999999999997653 344445 344567777543
Q ss_pred ccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHH
Q 037640 330 WGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALN 368 (398)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~ 368 (398)
+.+++.++|.++++|++....+.+++++
T Consensus 324 -----------d~~~la~~i~~l~~~~~~~~~~~~~a~~ 351 (374)
T TIGR03088 324 -----------DAVALARALQPYVSDPAARRAHGAAGRA 351 (374)
T ss_pred -----------CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 7889999999999877444445444444
No 101
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=97.32 E-value=0.1 Score=50.70 Aligned_cols=92 Identities=11% Similarity=0.110 Sum_probs=58.9
Q ss_pred CCCeEEeecC--chh---hhhcCCCcceeeecC---C-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEecc
Q 037640 254 GRGLVIWDWA--PQV---LILSHPSVGGFLTHC---G-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 254 ~~~v~~~~~~--pq~---~~L~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~ 324 (398)
..++.+.++. ++. .+++.+++ |+.-. | -.+++||+++|+|+|+....+ ....+ +.-..|..++
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i-~~~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI-EDGETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc-ccCCceEEeC-
Confidence 3567777776 433 46667776 77543 2 359999999999999975432 23334 3445566442
Q ss_pred CCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 325 ENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
+.+++..+|.++++|++..+.+.+++++.
T Consensus 323 ----------------~~~~~a~~i~~ll~~~~~~~~~~~~a~~~ 351 (372)
T cd03792 323 ----------------TVEEAAVRILYLLRDPELRRKMGANAREH 351 (372)
T ss_pred ----------------CcHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 34567779999998775555555555553
No 102
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.28 E-value=0.13 Score=51.01 Aligned_cols=79 Identities=22% Similarity=0.093 Sum_probs=52.8
Q ss_pred CCCeEEeecCchhh---hhcCCCcceeee-----cCCchhHHHHHHhCCCEeecccccchhhhHHHHHH---HhcceEEe
Q 037640 254 GRGLVIWDWAPQVL---ILSHPSVGGFLT-----HCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVH---LLKIGVKI 322 (398)
Q Consensus 254 ~~~v~~~~~~pq~~---~L~~~~~~~~it-----hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~---~~g~g~~l 322 (398)
.++|.+.+++|+.+ +|..+++ +|+ |-| .++.||+++|+|+|+.-..+. ..-+++ .-..|...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp----~~~iv~~~~~g~~G~l~ 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGP----LLDIVVPWDGGPTGFLA 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCC----chheeeccCCCCceEEe
Confidence 46788889998664 6777777 553 223 488999999999998643221 111112 23355542
Q ss_pred ccCCCCCccccccccccccHHHHHHHHHHHhccC
Q 037640 323 GVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEG 356 (398)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 356 (398)
-+.+++.++|.++++++
T Consensus 377 -----------------~d~~~la~ai~~ll~~~ 393 (419)
T cd03806 377 -----------------STAEEYAEAIEKILSLS 393 (419)
T ss_pred -----------------CCHHHHHHHHHHHHhCC
Confidence 26889999999999865
No 103
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.17 E-value=0.11 Score=49.70 Aligned_cols=126 Identities=13% Similarity=0.108 Sum_probs=75.8
Q ss_pred CCceEEEeeCCccc----CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEE-eecCchhh
Q 037640 193 PKSVVYACLGSMCN----LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVI-WDWAPQVL 267 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~----~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~-~~~~pq~~ 267 (398)
+.+.|++-+-+... ...+.+.++++.|++.+..+|...+...+.. +. + .-++.+ ..-++-.+
T Consensus 178 ~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~~~------~~----~---~~~~~i~~~~vd~~~ 244 (335)
T PF04007_consen 178 DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQRE------LF----E---KYGVIIPPEPVDGLD 244 (335)
T ss_pred CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcchhh------HH----h---ccCccccCCCCCHHH
Confidence 34577777766433 2234466789999988877555543332110 11 1 112332 24455568
Q ss_pred hhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHH
Q 037640 268 ILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKN 347 (398)
Q Consensus 268 ~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 347 (398)
+|.++++ +|+=|| .-..||..-|+|.|.+ +.++-...-+.+. +.|. .... -+.+++.+
T Consensus 245 Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~-~~Gl--l~~~---------------~~~~ei~~ 302 (335)
T PF04007_consen 245 LLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLI-EKGL--LYHS---------------TDPDEIVE 302 (335)
T ss_pred HHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHH-HCCC--eEec---------------CCHHHHHH
Confidence 9999999 999887 7788999999999975 2233223334553 5554 2221 36677777
Q ss_pred HHHHHh
Q 037640 348 AVERLM 353 (398)
Q Consensus 348 ai~~vl 353 (398)
.+.+.+
T Consensus 303 ~v~~~~ 308 (335)
T PF04007_consen 303 YVRKNL 308 (335)
T ss_pred HHHHhh
Confidence 666544
No 104
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.17 E-value=0.012 Score=56.39 Aligned_cols=78 Identities=9% Similarity=0.164 Sum_probs=53.7
Q ss_pred CCCeEEeecCch-hhhhcCCCcceeeecCC----chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 254 GRGLVIWDWAPQ-VLILSHPSVGGFLTHCG----WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 254 ~~~v~~~~~~pq-~~~L~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
..++.+.++..+ .+++..+++ ||.-.. -++++||+++|+|+|+. |...+...+ +. .|..+..
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i-~~--~g~~~~~---- 310 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVV-GD--SGLIVPI---- 310 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEe-cC--CceEeCC----
Confidence 357888877655 367888887 544322 46899999999999975 344455455 34 4444443
Q ss_pred CccccccccccccHHHHHHHHHHHhcc
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVERLMDE 355 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~vl~~ 355 (398)
-+.+++.+++.+++++
T Consensus 311 -----------~~~~~~~~~i~~ll~~ 326 (360)
T cd04951 311 -----------SDPEALANKIDEILKM 326 (360)
T ss_pred -----------CCHHHHHHHHHHHHhC
Confidence 3788999999999843
No 105
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.15 E-value=0.02 Score=55.77 Aligned_cols=149 Identities=13% Similarity=0.114 Sum_probs=84.4
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhC--CCCEEEEEeCCCCchhhhhccCchhHHHHhc-----CCCeEE-eecCchh-
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEAS--NRPFIWVIREGETSKELKKWVVEDGFEERIK-----GRGLVI-WDWAPQV- 266 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~v~~-~~~~pq~- 266 (398)
.+++..|.... ...+..++++++.. +.++++..++.... . +-+.+.+... ..+++. .+++++.
T Consensus 202 ~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~-~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 273 (388)
T TIGR02149 202 PYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDTP-E-----VAEEVRQAVALLDRNRTGIIWINKMLPKEE 273 (388)
T ss_pred eEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCcH-H-----HHHHHHHHHHHhccccCceEEecCCCCHHH
Confidence 45566677654 23345566666654 45666554433211 0 1112222111 234553 4577754
Q ss_pred --hhhcCCCcceeeec---CC-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccc
Q 037640 267 --LILSHPSVGGFLTH---CG-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLV 340 (398)
Q Consensus 267 --~~L~~~~~~~~ith---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~ 340 (398)
.++.++++ ||.- -| -.+++||+++|+|+|+.... .....+ +.-+.|..++... .+..-
T Consensus 274 ~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i-~~~~~G~~~~~~~---------~~~~~ 337 (388)
T TIGR02149 274 LVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVV-VDGETGFLVPPDN---------SDADG 337 (388)
T ss_pred HHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHh-hCCCceEEcCCCC---------Ccccc
Confidence 46777887 6642 12 35789999999999997543 344455 4556788876541 00012
Q ss_pred cHHHHHHHHHHHhccCcchHHHHHHHHH
Q 037640 341 KRDDVKNAVERLMDEGNDGEERRNRALN 368 (398)
Q Consensus 341 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~ 368 (398)
..+++.++|.++++|++..+.+.+++++
T Consensus 338 ~~~~l~~~i~~l~~~~~~~~~~~~~a~~ 365 (388)
T TIGR02149 338 FQAELAKAINILLADPELAKKMGIAGRK 365 (388)
T ss_pred hHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 2389999999999887555555555554
No 106
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.07 E-value=0.012 Score=56.33 Aligned_cols=140 Identities=14% Similarity=0.058 Sum_probs=79.1
Q ss_pred eEEEeeCCcccC-CHHHHHHHHHHHHhC--CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCch-hhhhcC
Q 037640 196 VVYACLGSMCNL-IPSQMMELGLGLEAS--NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQ-VLILSH 271 (398)
Q Consensus 196 vv~vs~Gs~~~~-~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq-~~~L~~ 271 (398)
.+++..|+.... ..+.+.+.+..+.+. +.++++ +|....... +-....+.....++...++..+ ..++..
T Consensus 193 ~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~i-vG~g~~~~~-----~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 266 (358)
T cd03812 193 FVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLL-VGDGELEEE-----IKKKVKELGLEDKVIFLGVRNDVPELLQA 266 (358)
T ss_pred EEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEE-EeCCchHHH-----HHHHHHhcCCCCcEEEecccCCHHHHHHh
Confidence 566677776642 244444445555443 334443 343321111 1111111112467888887544 357888
Q ss_pred CCcceeeec--CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHH
Q 037640 272 PSVGGFLTH--CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAV 349 (398)
Q Consensus 272 ~~~~~~ith--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai 349 (398)
+++-++-+. |--++++||+++|+|+|+....+ ....+ +. +.|..... -+.+++.++|
T Consensus 267 adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~~---------------~~~~~~a~~i 325 (358)
T cd03812 267 MDVFLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSLD---------------ESPEIWAEEI 325 (358)
T ss_pred cCEEEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeCC---------------CCHHHHHHHH
Confidence 877332222 33579999999999999865543 33344 34 55554432 3579999999
Q ss_pred HHHhccCcchHHH
Q 037640 350 ERLMDEGNDGEER 362 (398)
Q Consensus 350 ~~vl~~~~~~~~~ 362 (398)
.++++|++..+.+
T Consensus 326 ~~l~~~~~~~~~~ 338 (358)
T cd03812 326 LKLKSEDRRERSS 338 (358)
T ss_pred HHHHhCcchhhhh
Confidence 9999998544433
No 107
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.05 E-value=0.13 Score=49.56 Aligned_cols=154 Identities=16% Similarity=0.190 Sum_probs=93.5
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHH----hC-CCCEEEEEeCCCCchhhhhccCchhHH-HHhc-CCCeEEee---cCc
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLE----AS-NRPFIWVIREGETSKELKKWVVEDGFE-ERIK-GRGLVIWD---WAP 264 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~----~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~-~~~~-~~~v~~~~---~~p 264 (398)
..+++++=-..+.. +.+..+.+++. +. +..||.....+.. + .++. .+.+ ..++.+.+ |.+
T Consensus 205 ~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~~~--------v-~e~~~~~L~~~~~v~li~pl~~~~ 274 (383)
T COG0381 205 KYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPRPR--------V-RELVLKRLKNVERVKLIDPLGYLD 274 (383)
T ss_pred cEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCChh--------h-hHHHHHHhCCCCcEEEeCCcchHH
Confidence 38888765444443 44455555444 33 5566665543311 1 1111 2333 34677654 566
Q ss_pred hhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHH
Q 037640 265 QVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDD 344 (398)
Q Consensus 265 q~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
...++.++.+ ++|-.| +-.-||-..|+|.+++=...+++. .+ +.|.-+.++ .+.+.
T Consensus 275 f~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE---~v--~agt~~lvg----------------~~~~~ 330 (383)
T COG0381 275 FHNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE---GV--EAGTNILVG----------------TDEEN 330 (383)
T ss_pred HHHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc---ce--ecCceEEeC----------------ccHHH
Confidence 7778889988 999888 557799999999999987778875 22 345444443 46799
Q ss_pred HHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 037640 345 VKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLL 390 (398)
Q Consensus 345 l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 390 (398)
|.+++.++++++ +..++.+....-. .+|.+|.+-++.+
T Consensus 331 i~~~~~~ll~~~----~~~~~m~~~~npY----gdg~as~rIv~~l 368 (383)
T COG0381 331 ILDAATELLEDE----EFYERMSNAKNPY----GDGNASERIVEIL 368 (383)
T ss_pred HHHHHHHHhhCh----HHHHHHhcccCCC----cCcchHHHHHHHH
Confidence 999999999887 5444444333332 2344444444433
No 108
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=97.00 E-value=0.48 Score=50.41 Aligned_cols=94 Identities=11% Similarity=0.091 Sum_probs=58.2
Q ss_pred CCeEEeecC-ch---hhhhcC-C-Ccceeeec---CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEecc
Q 037640 255 RGLVIWDWA-PQ---VLILSH-P-SVGGFLTH---CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 255 ~~v~~~~~~-pq---~~~L~~-~-~~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~ 324 (398)
.+|...++. +. ..++.+ + +.++||.- =|. .+++||+++|+|+|+.-.. .....| +.-..|..++.
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV-~dg~tGfLVdp 693 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEII-QDGVSGFHIDP 693 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEeCC
Confidence 566666653 32 234543 2 12346643 232 5999999999999996443 344455 35556888865
Q ss_pred CCCCCccccccccccccHHHHHHHHHHHh----ccCcchHHHHHHHHH
Q 037640 325 ENPMTWGEEQNIGVLVKRDDVKNAVERLM----DEGNDGEERRNRALN 368 (398)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl----~~~~~~~~~~~~a~~ 368 (398)
. +.+++.++|.+++ .|++.++.+.+++++
T Consensus 694 ~---------------D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~ 726 (784)
T TIGR02470 694 Y---------------HGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQ 726 (784)
T ss_pred C---------------CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 3 7788888888765 567555555555543
No 109
>PLN00142 sucrose synthase
Probab=96.83 E-value=0.56 Score=50.02 Aligned_cols=73 Identities=14% Similarity=0.138 Sum_probs=47.5
Q ss_pred eeeec---CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHH
Q 037640 276 GFLTH---CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVER 351 (398)
Q Consensus 276 ~~ith---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~ 351 (398)
+||.- =|+ .+++||+++|+|+|+.... .....| +.-..|..++.. +.+++.++|.+
T Consensus 669 VfVlPS~~EgFGLvvLEAMA~GlPVVATdvG----G~~EIV-~dG~tG~LV~P~---------------D~eaLA~aI~~ 728 (815)
T PLN00142 669 AFVQPALYEAFGLTVVEAMTCGLPTFATCQG----GPAEII-VDGVSGFHIDPY---------------HGDEAANKIAD 728 (815)
T ss_pred EEEeCCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEeCCC---------------CHHHHHHHHHH
Confidence 36643 344 4899999999999996543 334445 354568877653 66777777765
Q ss_pred ----HhccCcchHHHHHHHHH
Q 037640 352 ----LMDEGNDGEERRNRALN 368 (398)
Q Consensus 352 ----vl~~~~~~~~~~~~a~~ 368 (398)
++.|++.+..+.+++++
T Consensus 729 lLekLl~Dp~lr~~mg~~Ar~ 749 (815)
T PLN00142 729 FFEKCKEDPSYWNKISDAGLQ 749 (815)
T ss_pred HHHHhcCCHHHHHHHHHHHHH
Confidence 45677666666665543
No 110
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.83 E-value=0.016 Score=58.26 Aligned_cols=122 Identities=17% Similarity=0.255 Sum_probs=80.6
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHH---H--hcCCCeEEeecCch--
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEE---R--IKGRGLVIWDWAPQ-- 265 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~---~--~~~~~v~~~~~~pq-- 265 (398)
++-|||.+|--...++++.++.-++-|.+.+..++|..+.+-... ..|.. . +.++.|++.+-+.-
T Consensus 757 ~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge--------~rf~ty~~~~Gl~p~riifs~va~k~e 828 (966)
T KOG4626|consen 757 EDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE--------QRFRTYAEQLGLEPDRIIFSPVAAKEE 828 (966)
T ss_pred CCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch--------HHHHHHHHHhCCCccceeeccccchHH
Confidence 345999999888889999999888889999999999998763211 11111 1 12445555444332
Q ss_pred ---hhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhh-HHHHHHHhcceEEecc
Q 037640 266 ---VLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTN-EKLAVHLLKIGVKIGV 324 (398)
Q Consensus 266 ---~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~~g~g~~l~~ 324 (398)
.-.|+.-.+.-+.+. |..|.++.++.|||||.+|.-.--... +..+ -..|+|..+.+
T Consensus 829 Hvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll-~~~Gl~hliak 889 (966)
T KOG4626|consen 829 HVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLL-TALGLGHLIAK 889 (966)
T ss_pred HHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHH-HHcccHHHHhh
Confidence 223444444446665 788999999999999999975432222 3344 37888886643
No 111
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.75 E-value=0.034 Score=53.30 Aligned_cols=136 Identities=15% Similarity=0.180 Sum_probs=75.0
Q ss_pred EEeeCCcccCCHHHHHHHHHHHHhCC--CCEEEEEeCCCCchhhhhccCchhHHHHh-cCCCeEEeecCchhh---hhcC
Q 037640 198 YACLGSMCNLIPSQMMELGLGLEASN--RPFIWVIREGETSKELKKWVVEDGFEERI-KGRGLVIWDWAPQVL---ILSH 271 (398)
Q Consensus 198 ~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~pq~~---~L~~ 271 (398)
++..|+.... ..+..+++++++.. .+++ .+|....... +-+.+.+.. ..++|.+.+++++.+ ++..
T Consensus 196 i~~~G~~~~~--Kg~~~li~a~~~l~~~~~l~-ivG~~~~~~~-----~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 196 YLLVGRIVPE--NNIDDLIEAFSKSNSGKKLV-IVGNADHNTP-----YGKLLKEKAAADPRIIFVGPIYDQELLELLRY 267 (363)
T ss_pred EEEEeccccc--CCHHHHHHHHHhhccCceEE-EEcCCCCcch-----HHHHHHHHhCCCCcEEEccccChHHHHHHHHh
Confidence 4456776642 23445666666543 4544 3444321111 111222111 257899999999864 5555
Q ss_pred CCcceeeecCC----c-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHH
Q 037640 272 PSVGGFLTHCG----W-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVK 346 (398)
Q Consensus 272 ~~~~~~ithgG----~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 346 (398)
+++ ++.+.- . ++++||+++|+|+|+....+ +...+ +. .|..+... + .+.
T Consensus 268 ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~~--~g~~~~~~---------------~--~l~ 321 (363)
T cd04955 268 AAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-GD--KAIYFKVG---------------D--DLA 321 (363)
T ss_pred CCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-cC--CeeEecCc---------------h--HHH
Confidence 666 544432 2 58999999999999875432 22222 22 23333221 1 299
Q ss_pred HHHHHHhccCcchHHHHHHHH
Q 037640 347 NAVERLMDEGNDGEERRNRAL 367 (398)
Q Consensus 347 ~ai~~vl~~~~~~~~~~~~a~ 367 (398)
++|.++++|++....+.++++
T Consensus 322 ~~i~~l~~~~~~~~~~~~~~~ 342 (363)
T cd04955 322 SLLEELEADPEEVSAMAKAAR 342 (363)
T ss_pred HHHHHHHhCHHHHHHHHHHHH
Confidence 999999987744444444443
No 112
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.69 E-value=0.04 Score=55.14 Aligned_cols=105 Identities=17% Similarity=0.292 Sum_probs=75.8
Q ss_pred CCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHH-----hcCCCeEEeecCchh
Q 037640 192 DPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEER-----IKGRGLVIWDWAPQV 266 (398)
Q Consensus 192 ~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~v~~~~~~pq~ 266 (398)
+++.+||+||+.....+++.+..=++-|+..+-.++|..+++.+.. +...+... +....+++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~------~~~~l~~la~~~Gv~~eRL~f~p~~~~~ 500 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAE------INARLRDLAEREGVDSERLRFLPPAPNE 500 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHH------HHHHHHHHHHHcCCChhheeecCCCCCH
Confidence 3456999999999999999998888888888999999988753322 22222221 234556666666655
Q ss_pred hhh---cCCCcceee---ecCCchhHHHHHHhCCCEeecccccchh
Q 037640 267 LIL---SHPSVGGFL---THCGWNSTLEGVCAGLPLLTWPLFADQF 306 (398)
Q Consensus 267 ~~L---~~~~~~~~i---thgG~~s~~eal~~GvP~l~~P~~~DQ~ 306 (398)
+.+ +-+++ |+ --||+.|+.|+|..|||+|.++ ++|+
T Consensus 501 ~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~F 542 (620)
T COG3914 501 DHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQF 542 (620)
T ss_pred HHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHH
Confidence 433 33444 55 4689999999999999999987 7877
No 113
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.61 E-value=0.44 Score=49.71 Aligned_cols=77 Identities=13% Similarity=0.076 Sum_probs=51.2
Q ss_pred CeEEeecCchh-hhhcCCCcceeeecC---C-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCc
Q 037640 256 GLVIWDWAPQV-LILSHPSVGGFLTHC---G-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTW 330 (398)
Q Consensus 256 ~v~~~~~~pq~-~~L~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~ 330 (398)
++...++.++. ++++..++ ||.-+ | -++++||+++|+|+|+.-..+... + ..-+.|. + .
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~g~nGl-l-~------ 665 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RSFPNCL-T-Y------ 665 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-eecCCeE-e-c------
Confidence 35566676655 48888887 76532 3 468999999999999986654221 2 1212222 2 1
Q ss_pred cccccccccccHHHHHHHHHHHhccCc
Q 037640 331 GEEQNIGVLVKRDDVKNAVERLMDEGN 357 (398)
Q Consensus 331 ~~~~~~~~~~~~~~l~~ai~~vl~~~~ 357 (398)
-+.+++.++|.+++.|++
T Consensus 666 ---------~D~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 666 ---------KTSEDFVAKVKEALANEP 683 (794)
T ss_pred ---------CCHHHHHHHHHHHHhCch
Confidence 268899999999998763
No 114
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.44 E-value=0.027 Score=54.09 Aligned_cols=110 Identities=11% Similarity=0.203 Sum_probs=74.9
Q ss_pred CCCeEEeecCchhhhh---cCCCcceeeecC-------Cc------hhHHHHHHhCCCEeecccccchhhhHHHHHHHhc
Q 037640 254 GRGLVIWDWAPQVLIL---SHPSVGGFLTHC-------GW------NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLK 317 (398)
Q Consensus 254 ~~~v~~~~~~pq~~~L---~~~~~~~~ithg-------G~------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g 317 (398)
..|+...+|+|+.++. +. +.+++...- .+ +=+.|.+++|+|+|+++ +...+..| ++.+
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V-~~~~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFI-VENG 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHH-HhCC
Confidence 4689999999988753 33 333332211 11 12777899999999964 45667777 6899
Q ss_pred ceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 037640 318 IGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQ 392 (398)
Q Consensus 318 ~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 392 (398)
+|..++ +.+++.+++.++. +++...|++|+++++++++. |.--.+.+.+++.
T Consensus 280 ~G~~v~-----------------~~~el~~~l~~~~--~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~~ 331 (333)
T PRK09814 280 LGFVVD-----------------SLEELPEIIDNIT--EEEYQEMVENVKKISKLLRN----GYFTKKALVDAIK 331 (333)
T ss_pred ceEEeC-----------------CHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHHh
Confidence 999884 3457888888753 35567899999999999873 4333444444443
No 115
>PLN02846 digalactosyldiacylglycerol synthase
Probab=96.25 E-value=1.4 Score=44.13 Aligned_cols=74 Identities=14% Similarity=0.039 Sum_probs=49.5
Q ss_pred EEeecCchhhhhcCCCcceeeecCC----chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCcccc
Q 037640 258 VIWDWAPQVLILSHPSVGGFLTHCG----WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEE 333 (398)
Q Consensus 258 ~~~~~~pq~~~L~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~ 333 (398)
+..++.+..+++...++ ||.-+- -++++||+++|+|+|+.-..+ | ..+ .+-+.|...
T Consensus 287 vf~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v-~~~~ng~~~----------- 347 (462)
T PLN02846 287 VYPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFF-KQFPNCRTY----------- 347 (462)
T ss_pred EECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-cee-ecCCceEec-----------
Confidence 34556666678888877 887642 479999999999999975432 2 233 233333322
Q ss_pred ccccccccHHHHHHHHHHHhccC
Q 037640 334 QNIGVLVKRDDVKNAVERLMDEG 356 (398)
Q Consensus 334 ~~~~~~~~~~~l~~ai~~vl~~~ 356 (398)
-+.+++.+++.++|.++
T Consensus 348 ------~~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 348 ------DDGKGFVRATLKALAEE 364 (462)
T ss_pred ------CCHHHHHHHHHHHHccC
Confidence 25678999999988753
No 116
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.93 E-value=0.32 Score=49.58 Aligned_cols=65 Identities=17% Similarity=0.134 Sum_probs=45.8
Q ss_pred CCCeEEeecCchh-hhhcCCCcceeeec---CC-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccC
Q 037640 254 GRGLVIWDWAPQV-LILSHPSVGGFLTH---CG-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVE 325 (398)
Q Consensus 254 ~~~v~~~~~~pq~-~~L~~~~~~~~ith---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 325 (398)
..+|.+.+|..+. .+|+.+++ ||.. -| -++++||+++|+|+|+.... .+...+ +.-..|..++..
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV-~dG~nG~LVp~~ 523 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECF-IEGVSGFILDDA 523 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHc-ccCCcEEEECCC
Confidence 4678888886543 46878877 7753 34 46999999999999987543 345555 355678777643
No 117
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=95.80 E-value=0.24 Score=46.84 Aligned_cols=128 Identities=10% Similarity=0.046 Sum_probs=75.6
Q ss_pred EEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHh-cCCCeEEeecCchhh---hhcCC
Q 037640 197 VYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERI-KGRGLVIWDWAPQVL---ILSHP 272 (398)
Q Consensus 197 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~pq~~---~L~~~ 272 (398)
+++..|.... ......+++++++.+.++++. |....... +-....+.. ...++.+.+++++.+ +++.+
T Consensus 173 ~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~-G~~~~~~~-----~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 173 YLLFLGRISP--EKGPHLAIRAARRAGIPLKLA-GPVSDPDY-----FYREIAPELLDGPDIEYLGEVGGAEKAELLGNA 244 (335)
T ss_pred EEEEEEeecc--ccCHHHHHHHHHhcCCeEEEE-eCCCCHHH-----HHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 4445566643 233456777787788776654 43321110 111111111 257899999999754 57777
Q ss_pred Ccceeeec--CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHH
Q 037640 273 SVGGFLTH--CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAV 349 (398)
Q Consensus 273 ~~~~~ith--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai 349 (398)
++-++-+. -|+ .+++||+++|+|+|+.... .+...+ +.-..|..++ ..+++.++|
T Consensus 245 d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~~-----------------~~~~l~~~l 302 (335)
T cd03802 245 RALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLVD-----------------SVEELAAAV 302 (335)
T ss_pred cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEeC-----------------CHHHHHHHH
Confidence 77333332 343 5899999999999987653 233333 2322555441 278999999
Q ss_pred HHHhc
Q 037640 350 ERLMD 354 (398)
Q Consensus 350 ~~vl~ 354 (398)
.+++.
T Consensus 303 ~~l~~ 307 (335)
T cd03802 303 ARADR 307 (335)
T ss_pred HHHhc
Confidence 88865
No 118
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.62 E-value=0.32 Score=49.11 Aligned_cols=129 Identities=9% Similarity=0.014 Sum_probs=72.2
Q ss_pred eEEEeeCCcccC-CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHh--cCCCeEEeecCchh---hhh
Q 037640 196 VVYACLGSMCNL-IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERI--KGRGLVIWDWAPQV---LIL 269 (398)
Q Consensus 196 vv~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~v~~~~~~pq~---~~L 269 (398)
.+++..|..... ..+.+.+.+..+.+.+.++++. |..... +.+.+.+.. .+.++.+....++. .++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~~~-------~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~ 363 (473)
T TIGR02095 292 PLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGDPE-------LEEALRELAERYPGNVRVIIGYDEALAHLIY 363 (473)
T ss_pred CEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCCHH-------HHHHHHHHHHHCCCcEEEEEcCCHHHHHHHH
Confidence 455666776652 2334444444444445666554 333110 112222211 23556665555543 467
Q ss_pred cCCCcceeeec---CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHh------cceEEeccCCCCCcccccccccc
Q 037640 270 SHPSVGGFLTH---CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLL------KIGVKIGVENPMTWGEEQNIGVL 339 (398)
Q Consensus 270 ~~~~~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~------g~g~~l~~~~~~~~~~~~~~~~~ 339 (398)
+.+++ |+.- -|. .+.+||+++|+|+|+....+ ....+ +.- +.|..+..
T Consensus 364 ~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v-~~~~~~~~~~~G~l~~~--------------- 421 (473)
T TIGR02095 364 AGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTV-VDGDPEAESGTGFLFEE--------------- 421 (473)
T ss_pred HhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceE-ecCCCCCCCCceEEeCC---------------
Confidence 77777 6632 233 48899999999999865432 11122 122 67777754
Q ss_pred ccHHHHHHHHHHHhc
Q 037640 340 VKRDDVKNAVERLMD 354 (398)
Q Consensus 340 ~~~~~l~~ai~~vl~ 354 (398)
-+.+++.++|.+++.
T Consensus 422 ~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 422 YDPGALLAALSRALR 436 (473)
T ss_pred CCHHHHHHHHHHHHH
Confidence 378899999999886
No 119
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.62 E-value=0.23 Score=49.99 Aligned_cols=132 Identities=14% Similarity=0.145 Sum_probs=71.2
Q ss_pred eEEEeeCCcccCC-HHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhc--CCCeEEeecCchh---hhh
Q 037640 196 VVYACLGSMCNLI-PSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIK--GRGLVIWDWAPQV---LIL 269 (398)
Q Consensus 196 vv~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~v~~~~~~pq~---~~L 269 (398)
.+++..|...... .+.+.+.+..+.+.+.++++. |..... +.+.+.+... ..++.+..-.++. .++
T Consensus 297 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 368 (476)
T cd03791 297 PLFGFVGRLTEQKGIDLLLEALPELLELGGQLVIL-GSGDPE-------YEEALRELAARYPGRVAVLIGYDEALAHLIY 368 (476)
T ss_pred CEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEE-ecCCHH-------HHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Confidence 4566677766422 334444444444445555554 333210 1122222211 4566654333433 366
Q ss_pred cCCCcceeeec-----CCchhHHHHHHhCCCEeeccccc--chhhhHHHHHHHhcceEEeccCCCCCccccccccccccH
Q 037640 270 SHPSVGGFLTH-----CGWNSTLEGVCAGLPLLTWPLFA--DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKR 342 (398)
Q Consensus 270 ~~~~~~~~ith-----gG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~ 342 (398)
+.+++ |+.- || .+.+||+++|+|+|+....+ |--.+.... .+.|.|..+... +.
T Consensus 369 ~~aDv--~l~pS~~E~~g-l~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-~~~~~G~~~~~~---------------~~ 429 (476)
T cd03791 369 AGADF--FLMPSRFEPCG-LTQMYAMRYGTVPIVRATGGLADTVIDYNED-TGEGTGFVFEGY---------------NA 429 (476)
T ss_pred HhCCE--EECCCCCCCCc-HHHHHHhhCCCCCEECcCCCccceEeCCcCC-CCCCCeEEeCCC---------------CH
Confidence 77776 5532 23 47899999999999865432 222111111 123478777643 78
Q ss_pred HHHHHHHHHHhc
Q 037640 343 DDVKNAVERLMD 354 (398)
Q Consensus 343 ~~l~~ai~~vl~ 354 (398)
+++.++|.+++.
T Consensus 430 ~~l~~~i~~~l~ 441 (476)
T cd03791 430 DALLAALRRALA 441 (476)
T ss_pred HHHHHHHHHHHH
Confidence 999999999885
No 120
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.50 E-value=0.64 Score=46.17 Aligned_cols=178 Identities=10% Similarity=0.097 Sum_probs=95.7
Q ss_pred hhhhcCCCCCceEEEeeCCcccC------CH----HHHHHHHHHHHhCCCCEEEEEeCCCC----chhhhhccCchhHHH
Q 037640 185 LKWLDSKDPKSVVYACLGSMCNL------IP----SQMMELGLGLEASNRPFIWVIREGET----SKELKKWVVEDGFEE 250 (398)
Q Consensus 185 ~~~l~~~~~~~vv~vs~Gs~~~~------~~----~~~~~~~~al~~~~~~~i~~~~~~~~----~~~~~~~~l~~~~~~ 250 (398)
..|+....++++|-||.-..... .. +.+.++++.|.+.++++++....... ..+. . .-..+.+
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~-~--~~~~l~~ 301 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDR-M--VALNLRQ 301 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchH-H--HHHHHHH
Confidence 44554433445787776544311 21 22334556665668888876532110 0000 0 1123333
Q ss_pred HhcCC-Ce-EEe-ecCchh--hhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEE-ecc
Q 037640 251 RIKGR-GL-VIW-DWAPQV--LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVK-IGV 324 (398)
Q Consensus 251 ~~~~~-~v-~~~-~~~pq~--~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~-l~~ 324 (398)
.+..+ ++ ++. ++-+.. .+++++.+ +|..= +=++.=|+..|||.+++++ | +.....+ +.+|.... ++.
T Consensus 302 ~~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~-~K~~~~~-~~lg~~~~~~~~ 374 (426)
T PRK10017 302 HVSDPARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--E-HKSAGIM-QQLGLPEMAIDI 374 (426)
T ss_pred hcccccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--h-HHHHHHH-HHcCCccEEech
Confidence 33322 22 222 233333 67777766 77542 2256678899999999998 2 3344445 57887755 443
Q ss_pred CCCCCccccccccccccHHHHHHHHHHHhccCcc-hHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 325 ENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGND-GEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
+ +++.++|.+.+.++++|.++ .+.+++++.++++.. .+...++++.+.
T Consensus 375 ~-------------~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~~----------~~~~~~~~~~~~ 423 (426)
T PRK10017 375 R-------------HLLDGSLQAMVADTLGQLPALNARLAEAVSRERQTG----------MQMVQSVLERIG 423 (426)
T ss_pred h-------------hCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHhc
Confidence 3 58889999999999976321 223333444443332 245556666554
No 121
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.36 E-value=0.73 Score=44.86 Aligned_cols=79 Identities=16% Similarity=0.096 Sum_probs=52.6
Q ss_pred CCCeEEeecCchhh---hhcCCCcceeee------cCCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEec
Q 037640 254 GRGLVIWDWAPQVL---ILSHPSVGGFLT------HCGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIG 323 (398)
Q Consensus 254 ~~~v~~~~~~pq~~---~L~~~~~~~~it------hgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~ 323 (398)
.+||...+++|+.+ +++++++.++-. .++. +-++|++++|+|+|+.++ ...+ +..+ |..+.
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~-~~~~~ 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYED-EVVLI 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcC-cEEEe
Confidence 47999999998664 577777744322 2232 458999999999998763 1222 2333 33332
Q ss_pred cCCCCCccccccccccccHHHHHHHHHHHhccC
Q 037640 324 VENPMTWGEEQNIGVLVKRDDVKNAVERLMDEG 356 (398)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 356 (398)
. -+.+++.++|.+++.++
T Consensus 324 ~---------------~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 324 A---------------DDPEEFVAAIEKALLED 341 (373)
T ss_pred C---------------CCHHHHHHHHHHHHhcC
Confidence 2 27899999999977543
No 122
>PRK14098 glycogen synthase; Provisional
Probab=95.28 E-value=0.47 Score=48.17 Aligned_cols=130 Identities=7% Similarity=0.029 Sum_probs=72.2
Q ss_pred eEEEeeCCcccCC-HHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHh--cCCCeEEeecCchh---hhh
Q 037640 196 VVYACLGSMCNLI-PSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERI--KGRGLVIWDWAPQV---LIL 269 (398)
Q Consensus 196 vv~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~v~~~~~~pq~---~~L 269 (398)
.++...|...... .+.+.+.+..+.+.+.+++. +|..... .-+.+.+.. .+.++.+..+++.. .++
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvi-vG~G~~~-------~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~ 379 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVI-CGSGDKE-------YEKRFQDFAEEHPEQVSVQTEFTDAFFHLAI 379 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEE-EeCCCHH-------HHHHHHHHHHHCCCCEEEEEecCHHHHHHHH
Confidence 3555566665532 33333333334334555544 3433210 111222211 24678888888764 577
Q ss_pred cCCCcceeeecC---Cc-hhHHHHHHhCCCEeeccccc--chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 270 SHPSVGGFLTHC---GW-NSTLEGVCAGLPLLTWPLFA--DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 270 ~~~~~~~~ithg---G~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
+.+++ |+.-. |. .+.+||+++|+|.|+....+ |...+ .. +.-+.|..+.. -+.+
T Consensus 380 a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~-~~~~~G~l~~~---------------~d~~ 439 (489)
T PRK14098 380 AGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VS-EDKGSGFIFHD---------------YTPE 439 (489)
T ss_pred HhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CC-CCCCceeEeCC---------------CCHH
Confidence 77777 66432 22 47899999999888876432 22111 11 12356777654 3789
Q ss_pred HHHHHHHHHh
Q 037640 344 DVKNAVERLM 353 (398)
Q Consensus 344 ~l~~ai~~vl 353 (398)
++.++|.+++
T Consensus 440 ~la~ai~~~l 449 (489)
T PRK14098 440 ALVAKLGEAL 449 (489)
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 123
>PHA01633 putative glycosyl transferase group 1
Probab=94.47 E-value=1.7 Score=41.74 Aligned_cols=85 Identities=13% Similarity=0.067 Sum_probs=53.4
Q ss_pred CCCeEEe---ecCchh---hhhcCCCcceeeec---CCc-hhHHHHHHhCCCEeeccc------ccch------hhhHHH
Q 037640 254 GRGLVIW---DWAPQV---LILSHPSVGGFLTH---CGW-NSTLEGVCAGLPLLTWPL------FADQ------FTNEKL 311 (398)
Q Consensus 254 ~~~v~~~---~~~pq~---~~L~~~~~~~~ith---gG~-~s~~eal~~GvP~l~~P~------~~DQ------~~na~~ 311 (398)
..++.+. +++++. ++++.+++ ||.- =|+ ++++||+++|+|+|+--. .+|+ ..+...
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 3577776 445544 56777777 7753 243 589999999999998633 2332 223332
Q ss_pred HHH-HhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhcc
Q 037640 312 AVH-LLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDE 355 (398)
Q Consensus 312 v~~-~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~ 355 (398)
.++ ..|.|..++ ..+++++.++|.+++..
T Consensus 278 ~~~~~~g~g~~~~---------------~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 278 YYDKEHGQKWKIH---------------KFQIEDMANAIILAFEL 307 (335)
T ss_pred hcCcccCceeeec---------------CCCHHHHHHHHHHHHhc
Confidence 221 234555553 26999999999998643
No 124
>PRK00654 glgA glycogen synthase; Provisional
Probab=93.98 E-value=1.7 Score=43.72 Aligned_cols=133 Identities=12% Similarity=0.100 Sum_probs=69.7
Q ss_pred eEEEeeCCcccC-CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHh--cCCCeE-EeecCchh--hhh
Q 037640 196 VVYACLGSMCNL-IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERI--KGRGLV-IWDWAPQV--LIL 269 (398)
Q Consensus 196 vv~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~v~-~~~~~pq~--~~L 269 (398)
.+++..|..... ..+.+.+.+..+.+.+.++++. |..... +.+.+.+.. .+.++. ..+|-.+. .++
T Consensus 283 ~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lviv-G~g~~~-------~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~ 354 (466)
T PRK00654 283 PLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLL-GTGDPE-------LEEAFRALAARYPGKVGVQIGYDEALAHRIY 354 (466)
T ss_pred cEEEEeeccccccChHHHHHHHHHHHhcCCEEEEE-ecCcHH-------HHHHHHHHHHHCCCcEEEEEeCCHHHHHHHH
Confidence 455666776642 2333333333333346676665 433210 111222211 133444 34553222 467
Q ss_pred cCCCcceeeec---CCc-hhHHHHHHhCCCEeeccccc--chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 270 SHPSVGGFLTH---CGW-NSTLEGVCAGLPLLTWPLFA--DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 270 ~~~~~~~~ith---gG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
+.+++ ||.- -|+ .+.+||+++|+|.|+.-..+ |.-.+...- ...+.|..++.. +.+
T Consensus 355 ~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~-~~~~~G~lv~~~---------------d~~ 416 (466)
T PRK00654 355 AGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE-DGEATGFVFDDF---------------NAE 416 (466)
T ss_pred hhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC-CCCCceEEeCCC---------------CHH
Confidence 77777 6642 233 48999999999999864432 211111000 022667777643 789
Q ss_pred HHHHHHHHHhc
Q 037640 344 DVKNAVERLMD 354 (398)
Q Consensus 344 ~l~~ai~~vl~ 354 (398)
++.++|.+++.
T Consensus 417 ~la~~i~~~l~ 427 (466)
T PRK00654 417 DLLRALRRALE 427 (466)
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 125
>PLN02275 transferase, transferring glycosyl groups
Probab=93.94 E-value=1.3 Score=43.09 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=51.8
Q ss_pred CCCeEEee-cCchhhh---hcCCCcceeee----c--CC-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEe
Q 037640 254 GRGLVIWD-WAPQVLI---LSHPSVGGFLT----H--CG-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKI 322 (398)
Q Consensus 254 ~~~v~~~~-~~pq~~~---L~~~~~~~~it----h--gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l 322 (398)
-.|+++.. |+|+.++ |+.+++ ||. . -| -++++||+++|+|+|+.... .+...+ +.-+.|..+
T Consensus 285 l~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv-~~g~~G~lv 357 (371)
T PLN02275 285 LRHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELV-KDGKNGLLF 357 (371)
T ss_pred CCceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHc-cCCCCeEEE
Confidence 35666655 7887654 777887 663 1 12 35799999999999997432 345555 466678776
Q ss_pred ccCCCCCccccccccccccHHHHHHHHHHHh
Q 037640 323 GVENPMTWGEEQNIGVLVKRDDVKNAVERLM 353 (398)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 353 (398)
+ +.+++.++|.+++
T Consensus 358 ~-----------------~~~~la~~i~~l~ 371 (371)
T PLN02275 358 S-----------------SSSELADQLLELL 371 (371)
T ss_pred C-----------------CHHHHHHHHHHhC
Confidence 2 3678888888764
No 126
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=93.83 E-value=0.52 Score=35.61 Aligned_cols=83 Identities=11% Similarity=0.130 Sum_probs=48.8
Q ss_pred cCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcch
Q 037640 280 HCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDG 359 (398)
Q Consensus 280 hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~ 359 (398)
+|-..-+.|++++|+|+|.-.. ..... ...-|...-.- -+.+++.++|..+++|++..
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~----~~~~~~~~~~~--------------~~~~el~~~i~~ll~~~~~~ 66 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLRE----IFEDGEHIITY--------------NDPEELAEKIEYLLENPEER 66 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHH----HcCCCCeEEEE--------------CCHHHHHHHHHHHHCCHHHH
Confidence 4445689999999999999754 11221 22222122111 27899999999999988444
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 037640 360 EERRNRALNLAKMAKMAIQEGGSSHLNITLLL 391 (398)
Q Consensus 360 ~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 391 (398)
+.+++++ ++.+.+..+....+++++
T Consensus 67 ~~ia~~a-------~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 67 RRIAKNA-------RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHH-------HHHHHHhCCHHHHHHHHH
Confidence 3333333 333333555555555554
No 127
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.80 E-value=0.52 Score=48.12 Aligned_cols=93 Identities=12% Similarity=0.183 Sum_probs=66.3
Q ss_pred CCeEEeecCch--h-hhhcCCCcceeeecC---CchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 255 RGLVIWDWAPQ--V-LILSHPSVGGFLTHC---GWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 255 ~~v~~~~~~pq--~-~~L~~~~~~~~ithg---G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
..|.+.++... . .++.++.+ +|.=+ |.++.+||+.+|+|+| .+.....| +...-|..+ +
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V-~d~~NG~li--~--- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYV-EHNKNGYII--D--- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceee-EcCCCcEEe--C---
Confidence 46777777773 2 46666666 88766 6779999999999999 33334445 355566666 2
Q ss_pred CccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAK 374 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 374 (398)
+.++|.++|..+|.+.+.+..+...+-+.++...
T Consensus 474 ------------d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 474 ------------DISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred ------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 6789999999999988666677766666665543
No 128
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=92.30 E-value=1.3 Score=42.03 Aligned_cols=143 Identities=14% Similarity=0.059 Sum_probs=78.5
Q ss_pred hhhcCCCCCceEEEeeCC-ccc--CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEee-
Q 037640 186 KWLDSKDPKSVVYACLGS-MCN--LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWD- 261 (398)
Q Consensus 186 ~~l~~~~~~~vv~vs~Gs-~~~--~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~- 261 (398)
+++....+++.|.+.-|+ ... .+.+.+.++++.+.+.+.++++..+...... ..+.+.+..... .+.+
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~------~~~~i~~~~~~~--~l~g~ 242 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQ------RAERIAEALPGA--VVLPK 242 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHH------HHHHHHhhCCCC--eecCC
Confidence 344333234455555554 433 6788999999999877788777655432111 112222221122 2222
Q ss_pred -cCchh-hhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCcccccccccc
Q 037640 262 -WAPQV-LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVL 339 (398)
Q Consensus 262 -~~pq~-~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~ 339 (398)
-++|. .+++++++ ||+.- -|-++=|.+.|+|+|++ ++ +.+..+. .=+|-...+-....| ..
T Consensus 243 ~sL~el~ali~~a~l--~I~~D-Sgp~HlAaa~g~P~i~l--fg--~t~p~~~-~P~~~~~~~~~~~~~---------~~ 305 (319)
T TIGR02193 243 MSLAEVAALLAGADA--VVGVD-TGLTHLAAALDKPTVTL--YG--ATDPGRT-GGYGKPNVALLGESG---------AN 305 (319)
T ss_pred CCHHHHHHHHHcCCE--EEeCC-ChHHHHHHHcCCCEEEE--EC--CCCHhhc-ccCCCCceEEccCcc---------CC
Confidence 23444 58888888 99874 46677788999999986 22 1222222 112222111111111 25
Q ss_pred ccHHHHHHHHHHHh
Q 037640 340 VKRDDVKNAVERLM 353 (398)
Q Consensus 340 ~~~~~l~~ai~~vl 353 (398)
++.+++.++++++|
T Consensus 306 I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 306 PTPDEVLAALEELL 319 (319)
T ss_pred CCHHHHHHHHHhhC
Confidence 89999999998764
No 129
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=92.01 E-value=4 Score=40.72 Aligned_cols=116 Identities=10% Similarity=0.053 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEe-ecCc-h-hhhhcCCCcceeeecCC--
Q 037640 209 PSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIW-DWAP-Q-VLILSHPSVGGFLTHCG-- 282 (398)
Q Consensus 209 ~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~-~~~p-q-~~~L~~~~~~~~ithgG-- 282 (398)
.+.++.+....+.. +..|=...+.. +...+.+...-.|+++. ++.+ + ..++..+.+-+-|+|+.
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~Iga~te----------~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~ 360 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHIAALTE----------MSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINHGNEI 360 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCc----------ccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccccccH
Confidence 44555666666654 45554433322 22222221123666654 4566 2 36999999988899987
Q ss_pred chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccC
Q 037640 283 WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEG 356 (398)
Q Consensus 283 ~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 356 (398)
.+++.||+.+|+|+++.=.. ..+...+. . |..+... +.+++.++|.++|.++
T Consensus 361 ~~al~eA~~~G~pI~afd~t---~~~~~~i~-~---g~l~~~~---------------~~~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 361 LNAVRRAFEYNLLILGFEET---AHNRDFIA-S---ENIFEHN---------------EVDQLISKLKDLLNDP 412 (438)
T ss_pred HHHHHHHHHcCCcEEEEecc---cCCccccc-C---CceecCC---------------CHHHHHHHHHHHhcCH
Confidence 47999999999999987322 22223332 2 5555443 6899999999999876
No 130
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=91.48 E-value=1.7 Score=43.77 Aligned_cols=103 Identities=17% Similarity=0.102 Sum_probs=65.1
Q ss_pred ecCchhh---hhcCCCcceeee---cCCch-hHHHHHHhCCC----EeecccccchhhhHHHHHHHhcceEEeccCCCCC
Q 037640 261 DWAPQVL---ILSHPSVGGFLT---HCGWN-STLEGVCAGLP----LLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMT 329 (398)
Q Consensus 261 ~~~pq~~---~L~~~~~~~~it---hgG~~-s~~eal~~GvP----~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 329 (398)
..+++.+ +++.+++ |+. +=|+| +..||+++|+| +|+--+.+ .+..+ +-|..++.
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G----~~~~l----~~gllVnP----- 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAG----AAQEL----NGALLVNP----- 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCC----ChHHh----CCcEEECC-----
Confidence 4556655 4556666 775 44764 88899999999 66654433 22222 34666654
Q ss_pred ccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 330 WGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
-+.++++++|.++++++ .++.+++.+++++.+. ..+...-.+++++++.
T Consensus 407 ----------~d~~~lA~aI~~aL~~~--~~er~~r~~~~~~~v~-----~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 ----------YDIDGMADAIARALTMP--LEEREERHRAMMDKLR-----KNDVQRWREDFLSDLN 455 (456)
T ss_pred ----------CCHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhh
Confidence 37899999999999754 1244455555555543 3555666777777664
No 131
>PHA01630 putative group 1 glycosyl transferase
Probab=90.40 E-value=2.9 Score=40.10 Aligned_cols=40 Identities=10% Similarity=0.014 Sum_probs=27.4
Q ss_pred cCchhh---hhcCCCcceeeecC-C-chhHHHHHHhCCCEeeccc
Q 037640 262 WAPQVL---ILSHPSVGGFLTHC-G-WNSTLEGVCAGLPLLTWPL 301 (398)
Q Consensus 262 ~~pq~~---~L~~~~~~~~ithg-G-~~s~~eal~~GvP~l~~P~ 301 (398)
++|+.+ +++.+++-++-++. | -.+++||+++|+|+|+.-.
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~ 241 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEK 241 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCC
Confidence 466544 57777773332332 2 4689999999999999754
No 132
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=90.18 E-value=0.28 Score=37.87 Aligned_cols=54 Identities=13% Similarity=0.153 Sum_probs=45.3
Q ss_pred hhhhhhhhcCCCCCceEEEeeCCcccC---CH--HHHHHHHHHHHhCCCCEEEEEeCCC
Q 037640 181 EHKCLKWLDSKDPKSVVYACLGSMCNL---IP--SQMMELGLGLEASNRPFIWVIREGE 234 (398)
Q Consensus 181 ~~~~~~~l~~~~~~~vv~vs~Gs~~~~---~~--~~~~~~~~al~~~~~~~i~~~~~~~ 234 (398)
...+..|+...++++.|.+++||.... .. ..+..++++++..+..+|..+....
T Consensus 27 ~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~ 85 (97)
T PF06722_consen 27 PAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQ 85 (97)
T ss_dssp SEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCC
T ss_pred CCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHH
Confidence 466788999988899999999999874 22 4677899999999999999997654
No 133
>PLN02316 synthase/transferase
Probab=89.98 E-value=17 Score=40.29 Aligned_cols=109 Identities=12% Similarity=0.001 Sum_probs=62.6
Q ss_pred CCeEEeecCchh---hhhcCCCcceeeecC---C-chhHHHHHHhCCCEeeccccc--chhhhH-------HHHHHHhcc
Q 037640 255 RGLVIWDWAPQV---LILSHPSVGGFLTHC---G-WNSTLEGVCAGLPLLTWPLFA--DQFTNE-------KLAVHLLKI 318 (398)
Q Consensus 255 ~~v~~~~~~pq~---~~L~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~--DQ~~na-------~~v~~~~g~ 318 (398)
.++.+....+.. .+++.+++ |+.-. | -.+.+||+++|+|.|+.-..+ |..... ... ..-+.
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~-g~~~t 976 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQ-GLEPN 976 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccccccc-ccCCc
Confidence 456554444543 46777776 77432 2 258999999999988764432 222111 100 01246
Q ss_pred eEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHH
Q 037640 319 GVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNI 387 (398)
Q Consensus 319 g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 387 (398)
|..+.. .+++.|..+|.+++. .|.+..+.+++..+.++.+.-|-...+
T Consensus 977 Gflf~~---------------~d~~aLa~AL~raL~------~~~~~~~~~~~~~r~~m~~dFSW~~~A 1024 (1036)
T PLN02316 977 GFSFDG---------------ADAAGVDYALNRAIS------AWYDGRDWFNSLCKRVMEQDWSWNRPA 1024 (1036)
T ss_pred eEEeCC---------------CCHHHHHHHHHHHHh------hhhhhHHHHHHHHHHHHHhhCCHHHHH
Confidence 777654 488899999999986 333444445555555554444433333
No 134
>PLN02939 transferase, transferring glycosyl groups
Probab=89.59 E-value=9.1 Score=41.73 Aligned_cols=84 Identities=11% Similarity=0.078 Sum_probs=52.8
Q ss_pred CCCeEEeecCchh---hhhcCCCcceeeecC---C-chhHHHHHHhCCCEeeccccc--chhhh--HHHHHHHhcceEEe
Q 037640 254 GRGLVIWDWAPQV---LILSHPSVGGFLTHC---G-WNSTLEGVCAGLPLLTWPLFA--DQFTN--EKLAVHLLKIGVKI 322 (398)
Q Consensus 254 ~~~v~~~~~~pq~---~~L~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~--DQ~~n--a~~v~~~~g~g~~l 322 (398)
..+|.+..+.+.. .+++.+++ ||.-. | -.+.+||+++|+|.|+....+ |-..+ ...+.+.-+.|..+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 3568877888764 47877777 77532 2 258999999999999876543 22211 10110123456666
Q ss_pred ccCCCCCccccccccccccHHHHHHHHHHHhc
Q 037640 323 GVENPMTWGEEQNIGVLVKRDDVKNAVERLMD 354 (398)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 354 (398)
.. -+.+++.++|.+++.
T Consensus 914 ~~---------------~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 LT---------------PDEQGLNSALERAFN 930 (977)
T ss_pred cC---------------CCHHHHHHHHHHHHH
Confidence 43 378888888888764
No 135
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.17 E-value=3 Score=36.29 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=35.7
Q ss_pred CCCeEEeecCch-h--h-hhcCCCcceeeecCC----chhHHHHHHhCCCEeecccccc
Q 037640 254 GRGLVIWDWAPQ-V--L-ILSHPSVGGFLTHCG----WNSTLEGVCAGLPLLTWPLFAD 304 (398)
Q Consensus 254 ~~~v~~~~~~pq-~--~-~L~~~~~~~~ithgG----~~s~~eal~~GvP~l~~P~~~D 304 (398)
..|+...+++++ . . +++.+++ +++-.. -+++.||+++|+|+|+.+..+.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 578888888632 2 2 3333666 777665 6899999999999999876543
No 136
>PRK14099 glycogen synthase; Provisional
Probab=88.49 E-value=4.8 Score=40.82 Aligned_cols=95 Identities=12% Similarity=0.137 Sum_probs=50.4
Q ss_pred CCe-EEeecCchhh-hh-cCCCcceeee---cCCc-hhHHHHHHhCCCEeeccccc--chhhhHHHHHHH--hcceEEec
Q 037640 255 RGL-VIWDWAPQVL-IL-SHPSVGGFLT---HCGW-NSTLEGVCAGLPLLTWPLFA--DQFTNEKLAVHL--LKIGVKIG 323 (398)
Q Consensus 255 ~~v-~~~~~~pq~~-~L-~~~~~~~~it---hgG~-~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~--~g~g~~l~ 323 (398)
.++ ...+|-.+.. ++ +.+++ |+. +=|. .+.+||+++|+|.|+.-..+ |-..+.....+. .+.|..++
T Consensus 350 ~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~ 427 (485)
T PRK14099 350 GQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS 427 (485)
T ss_pred CCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeC
Confidence 344 4556633322 22 33455 664 2333 47899999997766654322 322111111001 14677775
Q ss_pred cCCCCCccccccccccccHHHHHHHHHH---HhccCcchHHHHHHH
Q 037640 324 VENPMTWGEEQNIGVLVKRDDVKNAVER---LMDEGNDGEERRNRA 366 (398)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~---vl~~~~~~~~~~~~a 366 (398)
. -+.++|.++|.+ +++|++..+.+.+++
T Consensus 428 ~---------------~d~~~La~ai~~a~~l~~d~~~~~~l~~~~ 458 (485)
T PRK14099 428 P---------------VTADALAAALRKTAALFADPVAWRRLQRNG 458 (485)
T ss_pred C---------------CCHHHHHHHHHHHHHHhcCHHHHHHHHHHh
Confidence 4 378999999987 566654444444443
No 137
>PRK10125 putative glycosyl transferase; Provisional
Probab=88.27 E-value=5.4 Score=39.42 Aligned_cols=100 Identities=10% Similarity=0.038 Sum_probs=58.8
Q ss_pred HHHHHHHHHHhCCCCE-EEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCc-h---hhhhcCCCcceeeecCC---
Q 037640 211 QMMELGLGLEASNRPF-IWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAP-Q---VLILSHPSVGGFLTHCG--- 282 (398)
Q Consensus 211 ~~~~~~~al~~~~~~~-i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~p-q---~~~L~~~~~~~~ithgG--- 282 (398)
....+++|+...+..+ ++.+|..... . ..++...++.. + ..+++.+++ ||.-.=
T Consensus 257 g~~~li~A~~~l~~~~~L~ivG~g~~~-------~---------~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Eg 318 (405)
T PRK10125 257 TDQQLVREMMALGDKIELHTFGKFSPF-------T---------AGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDN 318 (405)
T ss_pred cHHHHHHHHHhCCCCeEEEEEcCCCcc-------c---------ccceEEecCcCCHHHHHHHHHhCCE--EEECCcccc
Confidence 3466888888764443 4445543210 1 23455555543 2 234555666 665332
Q ss_pred -chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHH
Q 037640 283 -WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAV 349 (398)
Q Consensus 283 -~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai 349 (398)
-++++||+++|+|+|+....+ ....+ +. +.|..+... +.++|.+++
T Consensus 319 fp~vilEAmA~G~PVVat~~gG----~~Eiv-~~-~~G~lv~~~---------------d~~~La~~~ 365 (405)
T PRK10125 319 YPLILCEALSIGVPVIATHSDA----AREVL-QK-SGGKTVSEE---------------EVLQLAQLS 365 (405)
T ss_pred CcCHHHHHHHcCCCEEEeCCCC----hHHhE-eC-CcEEEECCC---------------CHHHHHhcc
Confidence 368999999999999987754 22223 23 468877654 667777654
No 138
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=86.37 E-value=3.2 Score=41.81 Aligned_cols=104 Identities=19% Similarity=0.208 Sum_probs=59.9
Q ss_pred EeecCchhh---hhcCCCcceeee---cCCch-hHHHHHHhCCC----EeecccccchhhhHHHHHHHhcceEEeccCCC
Q 037640 259 IWDWAPQVL---ILSHPSVGGFLT---HCGWN-STLEGVCAGLP----LLTWPLFADQFTNEKLAVHLLKIGVKIGVENP 327 (398)
Q Consensus 259 ~~~~~pq~~---~L~~~~~~~~it---hgG~~-s~~eal~~GvP----~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~ 327 (398)
+.+++++.+ +++.+++ ||. +-|+| +++||+++|+| +|+--..+ .+ +...-|..++.
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G----~~----~~~~~g~lv~p--- 411 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG----AA----EELSGALLVNP--- 411 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc----ch----hhcCCCEEECC---
Confidence 345777665 4666777 663 34654 77999999999 55442221 11 11233566654
Q ss_pred CCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 037640 328 MTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDI 394 (398)
Q Consensus 328 ~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (398)
-+.+++.++|.++++++.+ ..+++.++.++.+. .-+...-.+++++++
T Consensus 412 ------------~d~~~la~ai~~~l~~~~~--e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 412 ------------YDIDEVADAIHRALTMPLE--ERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred ------------CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 3789999999999986521 22222233333322 345555666666654
No 139
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=81.26 E-value=12 Score=33.12 Aligned_cols=152 Identities=9% Similarity=0.006 Sum_probs=76.9
Q ss_pred hhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchh
Q 037640 187 WLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQV 266 (398)
Q Consensus 187 ~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~ 266 (398)
|++-. .+.+++|..|.++ ...++.|.+.+..+.+.. .. +.+.+.+......+.......+.
T Consensus 5 ~l~l~-~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs-~~----------~~~~l~~l~~~~~i~~~~~~~~~ 65 (202)
T PRK06718 5 MIDLS-NKRVVIVGGGKVA-------GRRAITLLKYGAHIVVIS-PE----------LTENLVKLVEEGKIRWKQKEFEP 65 (202)
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCeEEEEc-CC----------CCHHHHHHHhCCCEEEEecCCCh
Confidence 34433 3447777777665 344556666677665553 22 22222222223345444444444
Q ss_pred hhhcCCCcceeeecCCchhHHHHHH----hCCCEeecccccchhhhH-----HHHHHHhcceEEeccCCCCCcccccccc
Q 037640 267 LILSHPSVGGFLTHCGWNSTLEGVC----AGLPLLTWPLFADQFTNE-----KLAVHLLKIGVKIGVENPMTWGEEQNIG 337 (398)
Q Consensus 267 ~~L~~~~~~~~ithgG~~s~~eal~----~GvP~l~~P~~~DQ~~na-----~~v~~~~g~g~~l~~~~~~~~~~~~~~~ 337 (398)
.-+..+.+ +|.--+--.+.+.++ .++++-+ .|.+..+ ..+ ++-++-+.+... |.
T Consensus 66 ~~l~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~-~~g~l~iaIsT~----------G~ 128 (202)
T PRK06718 66 SDIVDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSAL-HRGKLTISVSTD----------GA 128 (202)
T ss_pred hhcCCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEE-EcCCeEEEEECC----------CC
Confidence 45666666 787777655555544 4454333 2433222 112 122222222221 11
Q ss_pred ccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Q 037640 338 VLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMA 376 (398)
Q Consensus 338 ~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~ 376 (398)
.-.-...|++.|.+++ ++....+-+.+.++++.++..
T Consensus 129 sP~la~~lr~~ie~~~--~~~~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 129 SPKLAKKIRDELEALY--DESYESYIDFLYECRQKIKEL 165 (202)
T ss_pred ChHHHHHHHHHHHHHc--chhHHHHHHHHHHHHHHHHHh
Confidence 1234456777777776 445557777888888887754
No 140
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=79.56 E-value=8.7 Score=35.58 Aligned_cols=96 Identities=15% Similarity=0.136 Sum_probs=58.6
Q ss_pred CceEEEeeCCccc---CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeE-Eeec--Cc-hh
Q 037640 194 KSVVYACLGSMCN---LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLV-IWDW--AP-QV 266 (398)
Q Consensus 194 ~~vv~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~-~~~~--~p-q~ 266 (398)
++.|.+..|+... .+.+.+.++++.+.+.++++++..++.+ .. .-+.+.+.....++. +.+- +. -.
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e-~~------~~~~i~~~~~~~~~~~~~~~~~l~e~~ 193 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAE-RE------LAEEIAAALGGPRVVNLAGKTSLRELA 193 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhh-HH------HHHHHHHhcCCCccccCcCCCCHHHHH
Confidence 3467777776543 6788899999999877888887644332 11 111222221112222 2222 22 33
Q ss_pred hhhcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 267 LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 267 ~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
.+++++++ +|+.-. +.++=|.+.|+|++++
T Consensus 194 ~li~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 194 ALLARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HHHHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 57888888 999854 5666678999999886
No 141
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=79.00 E-value=7.4 Score=36.41 Aligned_cols=80 Identities=19% Similarity=0.239 Sum_probs=45.5
Q ss_pred ecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhH--HHHHHHhcceEEeccCCCCCccccccccc
Q 037640 261 DWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNE--KLAVHLLKIGVKIGVENPMTWGEEQNIGV 338 (398)
Q Consensus 261 ~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na--~~v~~~~g~g~~l~~~~~~~~~~~~~~~~ 338 (398)
.|-...++|.++++ .|--.| ..+-.++--|||+|.+|-.+-|+.-. .+=..-+|+.+.+...
T Consensus 301 sqqsfadiLH~ada--algmAG-TAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~------------- 364 (412)
T COG4370 301 SQQSFADILHAADA--ALGMAG-TATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP------------- 364 (412)
T ss_pred eHHHHHHHHHHHHH--HHHhcc-chHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC-------------
Confidence 34444456665555 443333 12344577899999999999887544 2222345666655432
Q ss_pred cccHHHHHHHHHHHhccCcc
Q 037640 339 LVKRDDVKNAVERLMDEGND 358 (398)
Q Consensus 339 ~~~~~~l~~ai~~vl~~~~~ 358 (398)
....-..+.++++.|+++
T Consensus 365 --~aq~a~~~~q~ll~dp~r 382 (412)
T COG4370 365 --EAQAAAQAVQELLGDPQR 382 (412)
T ss_pred --chhhHHHHHHHHhcChHH
Confidence 222333344458999833
No 142
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=78.61 E-value=27 Score=30.93 Aligned_cols=149 Identities=12% Similarity=0.069 Sum_probs=73.4
Q ss_pred CceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCC
Q 037640 194 KSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPS 273 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~ 273 (398)
+.+++|..|... ..-++.|.+.+..+.+... . ..+.+.+-....++....--.+...+....
T Consensus 10 k~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp-~----------~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~ 71 (205)
T TIGR01470 10 RAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAE-E----------LESELTLLAEQGGITWLARCFDADILEGAF 71 (205)
T ss_pred CeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcC-C----------CCHHHHHHHHcCCEEEEeCCCCHHHhCCcE
Confidence 347777666655 3334556667777665532 2 112222222233554432222334466665
Q ss_pred cceeeecCCchhHHH-----HHHhCCCEee--cccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHH
Q 037640 274 VGGFLTHCGWNSTLE-----GVCAGLPLLT--WPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVK 346 (398)
Q Consensus 274 ~~~~ithgG~~s~~e-----al~~GvP~l~--~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 346 (398)
+ +|..-|...+.+ |-..|+|+-+ -|-.+| +..-..+ +.-++-+.+... |..-.-...|+
T Consensus 72 l--Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~-~~g~l~iaisT~----------G~sP~la~~lr 137 (205)
T TIGR01470 72 L--VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIV-DRSPVVVAISSG----------GAAPVLARLLR 137 (205)
T ss_pred E--EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEE-EcCCEEEEEECC----------CCCcHHHHHHH
Confidence 5 777777654433 3346777733 333222 1122222 122233333322 11123446788
Q ss_pred HHHHHHhccCcchHHHHHHHHHHHHHHHHH
Q 037640 347 NAVERLMDEGNDGEERRNRALNLAKMAKMA 376 (398)
Q Consensus 347 ~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~ 376 (398)
+.|.+++. +....+-+.+.++++.++..
T Consensus 138 ~~ie~~l~--~~~~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 138 ERIETLLP--PSLGDLATLAATWRDAVKKR 165 (205)
T ss_pred HHHHHhcc--hhHHHHHHHHHHHHHHHHhh
Confidence 88888774 23356667777777777654
No 143
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=75.86 E-value=15 Score=35.25 Aligned_cols=99 Identities=11% Similarity=0.086 Sum_probs=61.1
Q ss_pred CCceEEEeeCCccc---CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeE-Eeec--Cchh
Q 037640 193 PKSVVYACLGSMCN---LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLV-IWDW--APQV 266 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~-~~~~--~pq~ 266 (398)
+++.|.+..|+... .+.+.+.++++.|...+.++++.-++...... +-+.+.+.....+++ +.+- +.+.
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~-----~~~~i~~~~~~~~~~~l~g~~sL~el 254 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELA-----MVNEIAQGCQTPRVTSLAGKLTLPQL 254 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHH-----HHHHHHhhCCCCcccccCCCCCHHHH
Confidence 34567777776544 66888999999998778887776433211100 112222221122222 2222 3344
Q ss_pred -hhhcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 267 -LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 267 -~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
.+++++++ ||+. --|-++=|.+.|+|+|++
T Consensus 255 ~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 255 AALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 58888888 9998 557888899999999986
No 144
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=74.39 E-value=12 Score=38.49 Aligned_cols=80 Identities=14% Similarity=0.089 Sum_probs=46.6
Q ss_pred hhhhhcCCCcceeee-cCCc-hhHHHHHHhCCCEeeccccc-chhhhHHHHHHHh-cceEEeccCCCCCccccccccccc
Q 037640 265 QVLILSHPSVGGFLT-HCGW-NSTLEGVCAGLPLLTWPLFA-DQFTNEKLAVHLL-KIGVKIGVENPMTWGEEQNIGVLV 340 (398)
Q Consensus 265 q~~~L~~~~~~~~it-hgG~-~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~-g~g~~l~~~~~~~~~~~~~~~~~~ 340 (398)
..+++..+.+.+|-+ +=|+ .+.+||+++|+|+|.....+ ..... .+...- ..|+.+...+.. +-.-
T Consensus 468 y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~--E~v~~~~~~gi~V~~r~~~--------~~~e 537 (590)
T cd03793 468 YEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME--EHIEDPESYGIYIVDRRFK--------SPDE 537 (590)
T ss_pred hHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH--HHhccCCCceEEEecCCcc--------chHH
Confidence 455666667733333 3454 48999999999999987643 22222 221111 256666532100 1124
Q ss_pred cHHHHHHHHHHHhc
Q 037640 341 KRDDVKNAVERLMD 354 (398)
Q Consensus 341 ~~~~l~~ai~~vl~ 354 (398)
+.++|.+++.+++.
T Consensus 538 ~v~~La~~m~~~~~ 551 (590)
T cd03793 538 SVQQLTQYMYEFCQ 551 (590)
T ss_pred HHHHHHHHHHHHhC
Confidence 66789999988884
No 145
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=74.06 E-value=11 Score=34.15 Aligned_cols=99 Identities=12% Similarity=0.103 Sum_probs=52.8
Q ss_pred CCceEEEeeCCccc---CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecC--ch-h
Q 037640 193 PKSVVYACLGSMCN---LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWA--PQ-V 266 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--pq-~ 266 (398)
+++.|.+..|+... .+.+.+.++++.|.+.++++++..+..+...+ .-+.+.+......+.+.+-. .| .
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~e~~ 178 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKE-----IADQIAAGLQNPVINLAGKTSLRELA 178 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHH-----HHHHHHTTHTTTTEEETTTS-HHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHH-----HHHHHHHhcccceEeecCCCCHHHHH
Confidence 34577777777554 67888999999998877676654433220100 11111111111233333322 23 3
Q ss_pred hhhcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 267 LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 267 ~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
.+++++++ ||+.-. |.++=|.+.|+|+|++
T Consensus 179 ali~~a~~--~I~~Dt-g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 179 ALISRADL--VIGNDT-GPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHTSSE--EEEESS-HHHHHHHHTT--EEEE
T ss_pred HHHhcCCE--EEecCC-hHHHHHHHHhCCEEEE
Confidence 68888888 998754 6788889999999998
No 146
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=73.49 E-value=16 Score=39.52 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=56.8
Q ss_pred hhhcCCCcceeeec---CCch-hHHHHHHhCCC---EeecccccchhhhHHHHHHHhc-ceEEeccCCCCCccccccccc
Q 037640 267 LILSHPSVGGFLTH---CGWN-STLEGVCAGLP---LLTWPLFADQFTNEKLAVHLLK-IGVKIGVENPMTWGEEQNIGV 338 (398)
Q Consensus 267 ~~L~~~~~~~~ith---gG~~-s~~eal~~GvP---~l~~P~~~DQ~~na~~v~~~~g-~g~~l~~~~~~~~~~~~~~~~ 338 (398)
++++.+++ |+.- -|+| ..+|++++|+| ++++.-+ ...+. .+| -|+.++.
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~---~G~~~----~l~~~allVnP-------------- 427 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEF---AGAGQ----SLGAGALLVNP-------------- 427 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCC---cCchh----hhcCCeEEECC--------------
Confidence 46666666 7644 4876 77899999999 3444322 22222 234 4677765
Q ss_pred cccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 339 LVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 339 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
.+.++++++|.++|+.+. +..+++.+++.+.++ ..+...-.+++++.+.
T Consensus 428 -~D~~~lA~AI~~aL~m~~--~er~~r~~~~~~~v~-----~~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 428 -WNITEVSSAIKEALNMSD--EERETRHRHNFQYVK-----THSAQKWADDFMSELN 476 (797)
T ss_pred -CCHHHHHHHHHHHHhCCH--HHHHHHHHHHHHhhh-----hCCHHHHHHHHHHHHH
Confidence 488999999999997321 123333444444433 3344444555555543
No 147
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=71.68 E-value=17 Score=33.57 Aligned_cols=81 Identities=12% Similarity=0.143 Sum_probs=48.4
Q ss_pred HHHHHHHHHH-hC-CCCEEEEEeCCCCchhhhhccCchhHH-HHhcCCC-eEEeecCchhhhhcCCCcceeeecCCchhH
Q 037640 211 QMMELGLGLE-AS-NRPFIWVIREGETSKELKKWVVEDGFE-ERIKGRG-LVIWDWAPQVLILSHPSVGGFLTHCGWNST 286 (398)
Q Consensus 211 ~~~~~~~al~-~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~-v~~~~~~pq~~~L~~~~~~~~ithgG~~s~ 286 (398)
.+..++..+. .. +.+++++.-+..... ...++. +.....+ +.+.+-.+-.++|.++.. +||-.+ ..-
T Consensus 141 ~~~~~l~~~~~~~p~~~lvvK~HP~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~s~~--VvtinS-tvG 211 (269)
T PF05159_consen 141 DFLDMLESFAKENPDAKLVVKPHPDERGG------NKYSYLEELPNLPNVVIIDDDVNLYELLEQSDA--VVTINS-TVG 211 (269)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECchhhCC------CChhHhhhhhcCCCeEEECCCCCHHHHHHhCCE--EEEECC-HHH
Confidence 3344444333 33 678888775532111 111111 1112233 444556777889999988 888765 477
Q ss_pred HHHHHhCCCEeecc
Q 037640 287 LEGVCAGLPLLTWP 300 (398)
Q Consensus 287 ~eal~~GvP~l~~P 300 (398)
+||+.+|+|++++-
T Consensus 212 lEAll~gkpVi~~G 225 (269)
T PF05159_consen 212 LEALLHGKPVIVFG 225 (269)
T ss_pred HHHHHcCCceEEec
Confidence 89999999999974
No 148
>PLN02470 acetolactate synthase
Probab=70.97 E-value=13 Score=38.60 Aligned_cols=92 Identities=12% Similarity=0.110 Sum_probs=55.4
Q ss_pred eeCCcccCCHH--HHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEee--------cCchhhhh
Q 037640 200 CLGSMCNLIPS--QMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWD--------WAPQVLIL 269 (398)
Q Consensus 200 s~Gs~~~~~~~--~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~--------~~pq~~~L 269 (398)
+|||....+.. ....+++.|++.|...|+.+.+..... +-+.+. ..+++.... ++-..--.
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~~------l~dal~---~~~~i~~i~~rhE~~A~~~Adgyar 72 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASME------IHQALT---RSNCIRNVLCRHEQGEVFAAEGYAK 72 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccHH------HHHHHh---ccCCceEEEeccHHHHHHHHHHHHH
Confidence 46777664433 356789999999999999886653211 112221 122333221 11111112
Q ss_pred cCCCcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 270 SHPSVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 270 ~~~~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
.+.+.+++++|.| .+++.+|...++|||++.
T Consensus 73 ~tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 73 ASGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred HhCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 2345667999998 458999999999999995
No 149
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=70.67 E-value=65 Score=27.27 Aligned_cols=28 Identities=21% Similarity=0.252 Sum_probs=22.9
Q ss_pred CcceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
+.+++++|+|- +++.+|...++|||++.
T Consensus 63 ~~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 63 KLGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34458888884 48899999999999996
No 150
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=70.39 E-value=44 Score=28.24 Aligned_cols=29 Identities=17% Similarity=0.295 Sum_probs=22.4
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeeccc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWPL 301 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P~ 301 (398)
..+++++|.| .+++.||...++|||++.-
T Consensus 59 ~~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 59 GLGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 3455777777 3488899999999999963
No 151
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=69.92 E-value=61 Score=34.75 Aligned_cols=109 Identities=14% Similarity=0.118 Sum_probs=61.1
Q ss_pred EeecCchhh---hhcCCCcceeeec---CCch-hHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCcc
Q 037640 259 IWDWAPQVL---ILSHPSVGGFLTH---CGWN-STLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWG 331 (398)
Q Consensus 259 ~~~~~pq~~---~L~~~~~~~~ith---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~ 331 (398)
+.+++++.+ +++.+++ |+.- -|+| ...|++++|+|-.+.|+..+--.-+. ++.-|+.++.
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~----~l~~~llv~P------- 412 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAA----ELAEALLVNP------- 412 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhH----HhCcCeEECC-------
Confidence 446778775 5555666 6643 3654 78999999876333333332222222 2223676765
Q ss_pred ccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 332 EEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 332 ~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
-+.+++.++|.++++.+.. +.+++.+++++.++ ..+...-.+++++.+.
T Consensus 413 --------~d~~~la~ai~~~l~~~~~--e~~~r~~~~~~~v~-----~~~~~~w~~~~l~~l~ 461 (726)
T PRK14501 413 --------NDIEGIAAAIKRALEMPEE--EQRERMQAMQERLR-----RYDVHKWASDFLDELR 461 (726)
T ss_pred --------CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH-----hCCHHHHHHHHHHHHH
Confidence 3789999999999975421 33333333333332 3444455555555543
No 152
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=69.48 E-value=31 Score=33.19 Aligned_cols=98 Identities=8% Similarity=0.053 Sum_probs=60.6
Q ss_pred CceEEEeeCCccc---CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCC-eEEeec--Cchh-
Q 037640 194 KSVVYACLGSMCN---LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRG-LVIWDW--APQV- 266 (398)
Q Consensus 194 ~~vv~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-v~~~~~--~pq~- 266 (398)
++.|.+.-|+... .+.+.+.++++.|.+.+.++++.-++.+.... ..+.+.+.....+ +-+.+- +.+.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~-----~~~~i~~~~~~~~~~~l~g~~sL~el~ 257 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLA-----CVNEIAQGCQTPPVTALAGKTTFPELG 257 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHH-----HHHHHHHhcCCCccccccCCCCHHHHH
Confidence 4577777777544 67889999999998778887776544321110 1112222111122 222232 3344
Q ss_pred hhhcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 267 LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 267 ~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
.+++++++ ||+.-. |-++=|.+.|+|+|++
T Consensus 258 ali~~a~l--~v~nDS-Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 258 ALIDHAQL--FIGVDS-APAHIAAAVNTPLICL 287 (352)
T ss_pred HHHHhCCE--EEecCC-HHHHHHHHcCCCEEEE
Confidence 58888888 998854 6777788999999886
No 153
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=67.95 E-value=14 Score=35.04 Aligned_cols=94 Identities=11% Similarity=-0.068 Sum_probs=57.3
Q ss_pred ceEE-EeeCCccc--CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEee--cCchh-hh
Q 037640 195 SVVY-ACLGSMCN--LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWD--WAPQV-LI 268 (398)
Q Consensus 195 ~vv~-vs~Gs~~~--~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~--~~pq~-~~ 268 (398)
+.|. +..||... .+.+.+.++++.+.+.+.++++..|...+.. ..+.+.+. ..++.+.+ .+.+. .+
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~------~~~~i~~~--~~~~~l~g~~sL~elaal 250 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQ------RAKRLAEG--FPYVEVLPKLSLEQVARV 250 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHH------HHHHHHcc--CCcceecCCCCHHHHHHH
Confidence 4544 44444433 6788999999999877888776545332111 11122111 12233322 23344 58
Q ss_pred hcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 269 LSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 269 L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
++++++ ||+... |.++=|.+.|+|+|++
T Consensus 251 i~~a~l--~I~nDS-Gp~HlA~A~g~p~val 278 (322)
T PRK10964 251 LAGAKA--VVSVDT-GLSHLTAALDRPNITL 278 (322)
T ss_pred HHhCCE--EEecCC-cHHHHHHHhCCCEEEE
Confidence 888888 998754 6788889999999986
No 154
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=67.52 E-value=1.1e+02 Score=28.91 Aligned_cols=58 Identities=14% Similarity=0.036 Sum_probs=39.1
Q ss_pred chhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhh----hHHHHHHHhcceEEecc
Q 037640 264 PQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFT----NEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 264 pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~----na~~v~~~~g~g~~l~~ 324 (398)
|....|+.++. +|||=--.+-+.||+..|+|+.++|... +.. -.+.+ ++.|+-..++.
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L-~~~g~~r~~~~ 282 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSL-EERGAVRPFTG 282 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHH-HHCCCEEECCC
Confidence 46678888776 3555555688899999999999999876 221 12334 35666666653
No 155
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=67.18 E-value=6.3 Score=31.95 Aligned_cols=33 Identities=18% Similarity=0.111 Sum_probs=27.0
Q ss_pred CCCcEEEECCCcccHHHHHHHcCCCeEEEechh
Q 037640 31 PQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTC 63 (398)
Q Consensus 31 ~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~ 63 (398)
...|+++.+.....+..+||+++||++.....+
T Consensus 99 ~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 99 VADDVIIAAPLAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp TECCEECHHHHHTHHHHHHHHHTS-EEEEESSG
T ss_pred ccchHHHhhhhcCccceeEhhhCchHHHHhhCC
Confidence 368888889888899999999999999876553
No 156
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=65.18 E-value=9.2 Score=37.06 Aligned_cols=116 Identities=10% Similarity=0.182 Sum_probs=63.9
Q ss_pred CCCeEEe-ecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccc
Q 037640 254 GRGLVIW-DWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGE 332 (398)
Q Consensus 254 ~~~v~~~-~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~ 332 (398)
..+++.. +..+-.++|..+++ .||-.. ..+.|.++.++|+|....-.|.+.. ..| ...+... ..-|
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPiify~~D~~~Y~~------~rg--~~~~~~~-~~pg- 317 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPIIFYQPDLEEYEK------ERG--FYFDYEE-DLPG- 317 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTT------TSS--BSS-TTT-SSSS-
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEEEEeccHHHHhh------ccC--CCCchHh-hCCC-
Confidence 3566553 44567789999998 999874 5788999999999988766665533 222 2222210 0001
Q ss_pred cccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 037640 333 EQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLL 390 (398)
Q Consensus 333 ~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 390 (398)
..--+.++|.++|.+++.+++ .++++.++..+.+-. ..+|.++.+-++.+
T Consensus 318 ----~~~~~~~eL~~~i~~~~~~~~---~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 318 ----PIVYNFEELIEAIENIIENPD---EYKEKREKFRDKFFK-YNDGNSSERIVNYI 367 (369)
T ss_dssp -----EESSHHHHHHHHTTHHHHHH---HTHHHHHHHHHHHST-T--S-HHHHHHHHH
T ss_pred ----ceeCCHHHHHHHHHhhhhCCH---HHHHHHHHHHHHhCC-CCCchHHHHHHHHH
Confidence 112478999999999887542 444555666666543 23455555444443
No 157
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=64.42 E-value=71 Score=26.40 Aligned_cols=29 Identities=21% Similarity=0.221 Sum_probs=22.6
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeeccc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWPL 301 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P~ 301 (398)
+..++++|+| .+.+.+|...++|+|++.-
T Consensus 59 ~~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 59 KPGVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CCEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 3445888866 4588899999999999863
No 158
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=62.68 E-value=35 Score=28.93 Aligned_cols=28 Identities=21% Similarity=0.374 Sum_probs=22.6
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|+| .+++.||...++|||++.
T Consensus 60 ~~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 60 RPVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CCEEEEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 3444888888 448889999999999995
No 159
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=62.61 E-value=1.5e+02 Score=28.60 Aligned_cols=309 Identities=14% Similarity=0.133 Sum_probs=150.1
Q ss_pred hHHHHHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHH-HcCCCeEEEechhHHHHHHHHHhhhhcccccccCC
Q 037640 7 LALDFFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAG-KFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSE 85 (398)
Q Consensus 7 ~~~~l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~-~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
.+-.+..++..|.-.++++++= .||+-|-....+....+.+ ..+||++++.-.+..+..+.......+.
T Consensus 128 hfTllgQaigsmIl~~Eai~r~---~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~------- 197 (465)
T KOG1387|consen 128 HFTLLGQAIGSMILAFEAIIRF---PPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQK------- 197 (465)
T ss_pred ceehHHHHHHHHHHHHHHHHhC---CchheEecCCCcchhHHHHHHccCceEEEEecccccHHHHHHHHhhhh-------
Confidence 4556777777777788888855 8998875554555555544 6689999987776666555433321000
Q ss_pred CCccccCCCCcccccccccccccCCcchHHHHHHHHhhh-ccCcEEEEcChhhccHHHHHHHHhhcCCc-eeecCcccCC
Q 037640 86 SEYFSVPGLPDKIELTKKQVDSTQGQKFKAFEYKIGAAT-LAIDGVIINSFEELEPAYVKEYKKISRDK-AWCIGPVSLS 163 (398)
Q Consensus 86 ~~~~~~pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~li~s~~~le~~~~~~~~~~~~~~-v~~vGpl~~~ 163 (398)
.++.. . ..-.+.+++..+.... ..++.+++||...-. +..+.|..+ +..|=|-.
T Consensus 198 ------s~~l~-----~------~KlaY~rlFa~lY~~~G~~ad~vm~NssWT~n-----HI~qiW~~~~~~iVyPPC-- 253 (465)
T KOG1387|consen 198 ------SGILV-----W------GKLAYWRLFALLYQSAGSKADIVMTNSSWTNN-----HIKQIWQSNTCSIVYPPC-- 253 (465)
T ss_pred ------cchhh-----h------HHHHHHHHHHHHHHhccccceEEEecchhhHH-----HHHHHhhccceeEEcCCC--
Confidence 01100 0 0001233444444444 456678889877333 344555432 11121111
Q ss_pred CcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHH-HHHHHHHHHhCC-----C--CEEEEEeC---
Q 037640 164 NKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQ-MMELGLGLEASN-----R--PFIWVIRE--- 232 (398)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~-~~~~~~al~~~~-----~--~~i~~~~~--- 232 (398)
..+++.+-....+++-...+|.|-.-.-.... ++..+--+.+.+ . ..+.+ |+
T Consensus 254 ----------------~~e~lks~~~te~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~iv-GScRn 316 (465)
T KOG1387|consen 254 ----------------STEDLKSKFGTEGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIV-GSCRN 316 (465)
T ss_pred ----------------CHHHHHHHhcccCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEE-eccCC
Confidence 02334443333334446667666544322222 222222222222 2 22222 22
Q ss_pred CCCchhhhhccCchhHHHHhc-CCCeEEeecCchhh---hhcCCCcceeeecCCch-----hHHHHHHhCCCEeeccccc
Q 037640 233 GETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQVL---ILSHPSVGGFLTHCGWN-----STLEGVCAGLPLLTWPLFA 303 (398)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq~~---~L~~~~~~~~ithgG~~-----s~~eal~~GvP~l~~P~~~ 303 (398)
.++...+.. + ..+.+.++ +.++....-+|..+ +|+.+.+ =-|+=|| |+.|.+++|.=+|+-=
T Consensus 317 eeD~ervk~--L-kd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a~i---Gvh~MwNEHFGIsVVEyMAAGlIpi~h~--- 387 (465)
T KOG1387|consen 317 EEDEERVKS--L-KDLAEELKIPKHVQFEKNVPYEKLVELLGKATI---GVHTMWNEHFGISVVEYMAAGLIPIVHN--- 387 (465)
T ss_pred hhhHHHHHH--H-HHHHHhcCCccceEEEecCCHHHHHHHhcccee---ehhhhhhhhcchhHHHHHhcCceEEEeC---
Confidence 111111110 1 11112222 46677766777665 4544444 2233344 8899999997554421
Q ss_pred chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhc-cCcchHHHHHHHHHHHHHHHHHHhcCCc
Q 037640 304 DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMD-EGNDGEERRNRALNLAKMAKMAIQEGGS 382 (398)
Q Consensus 304 DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~-~~~~~~~~~~~a~~l~~~~~~~~~~~g~ 382 (398)
..|-.++. ++.|.-..+|=--.|.++-.+++-+++. |.++...+|++|++=..++.+...+
T Consensus 388 -------------SgGP~lDI--V~~~~G~~tGFla~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~--- 449 (465)
T KOG1387|consen 388 -------------SGGPLLDI--VTPWDGETTGFLAPTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFD--- 449 (465)
T ss_pred -------------CCCCceee--eeccCCccceeecCChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHH---
Confidence 11211110 1111101110012466677788877764 4555778889998888887655333
Q ss_pred hHHHHHHHHHHHH
Q 037640 383 SHLNITLLLQDIM 395 (398)
Q Consensus 383 ~~~~~~~~~~~~~ 395 (398)
+++...+..+.
T Consensus 450 --kd~~~~i~kll 460 (465)
T KOG1387|consen 450 --KDWENPICKLL 460 (465)
T ss_pred --HhHhHHHHHhh
Confidence 55555555443
No 160
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=61.62 E-value=24 Score=29.95 Aligned_cols=44 Identities=20% Similarity=0.338 Sum_probs=29.5
Q ss_pred HhchHHHHHHHhhcCCCCcEEEECCCcccHHHHH----H-Hc-CCCeEEEec
Q 037640 16 DKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIA----G-KF-NVPRIAFHG 61 (398)
Q Consensus 16 ~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA----~-~l-gIP~v~~~~ 61 (398)
....+.+.++|++ .+||+||+-..++.+..++ + .+ ++|.+.+.|
T Consensus 75 ~~~~~~l~~~l~~--~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 75 RLFARRLIRLLRE--FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHHHHHHhh--cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 3456788899999 9999999998765433122 2 23 577775543
No 161
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=61.23 E-value=1.3e+02 Score=27.27 Aligned_cols=81 Identities=17% Similarity=0.311 Sum_probs=51.6
Q ss_pred CCCeEEeecCc---hhhhhcCCCcceeeec---CCch-hHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCC
Q 037640 254 GRGLVIWDWAP---QVLILSHPSVGGFLTH---CGWN-STLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVEN 326 (398)
Q Consensus 254 ~~~v~~~~~~p---q~~~L~~~~~~~~ith---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 326 (398)
..++...++++ ...++..+.+ ++.- .|.+ ++.||+++|+|+|..... .....+ ...+.|. +...
T Consensus 256 ~~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~-~~~~~g~-~~~~- 326 (381)
T COG0438 256 EDNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVV-EDGETGL-LVPP- 326 (381)
T ss_pred CCcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHh-cCCCceE-ecCC-
Confidence 36778788888 3345666666 5544 3554 469999999999776543 222233 2222365 4322
Q ss_pred CCCccccccccccccHHHHHHHHHHHhccC
Q 037640 327 PMTWGEEQNIGVLVKRDDVKNAVERLMDEG 356 (398)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~ 356 (398)
.+.+++.+++..++++.
T Consensus 327 -------------~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 327 -------------GDVEELADALEQLLEDP 343 (381)
T ss_pred -------------CCHHHHHHHHHHHhcCH
Confidence 26889999999998765
No 162
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=60.57 E-value=38 Score=32.45 Aligned_cols=97 Identities=9% Similarity=0.071 Sum_probs=59.3
Q ss_pred CCceEEEeeCCcc--c--CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCC---C-eEEeec--
Q 037640 193 PKSVVYACLGSMC--N--LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGR---G-LVIWDW-- 262 (398)
Q Consensus 193 ~~~vv~vs~Gs~~--~--~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~-v~~~~~-- 262 (398)
+++.|.+.-|+.. . .+.+.+.++++.|...+.++++. |+..+.. .-+.+.+..... + +.+.+-
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~e~~------~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAKDHE------AGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHHhHH------HHHHHHHhcccccccceeeccCCCC
Confidence 4567888888742 2 67889999999997667777765 4332211 111221211111 1 122222
Q ss_pred Cchh-hhhcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 263 APQV-LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 263 ~pq~-~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
+.+. .+++++++ ||+.- -|-++=|.+.|+|+|++
T Consensus 252 L~el~ali~~a~l--~I~nD-TGp~HlAaA~g~P~val 286 (348)
T PRK10916 252 LEQAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHHHhCCE--EEecC-ChHHHHHHHhCCCEEEE
Confidence 3333 58888888 99874 46788889999999985
No 163
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=60.45 E-value=62 Score=30.72 Aligned_cols=96 Identities=10% Similarity=0.109 Sum_probs=58.9
Q ss_pred CCceEEEeeCCcc-c---CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeE-Eee--cCch
Q 037640 193 PKSVVYACLGSMC-N---LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLV-IWD--WAPQ 265 (398)
Q Consensus 193 ~~~vv~vs~Gs~~-~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~-~~~--~~pq 265 (398)
+++.|.+.-|+.. . .+.+.+.++++.+.+.+.+++.. |...+.. .-+.+.+.. ..+++ +.+ -+.+
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~~------~~~~i~~~~-~~~~~~l~g~~sL~e 244 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKDHP------AGNEIEALL-PGELRNLAGETSLDE 244 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhhHH------HHHHHHHhC-CcccccCCCCCCHHH
Confidence 3567888877742 2 67889999999998777777655 4432211 112222221 12222 222 2334
Q ss_pred h-hhhcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 266 V-LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 266 ~-~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
. .+++++++ ||+.-. |-++=|.+.|+|+|++
T Consensus 245 l~ali~~a~l--~I~~DS-Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 245 AVDLIALAKA--VVTNDS-GLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHHhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 4 58888888 998744 6677788999999985
No 164
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=57.93 E-value=39 Score=28.59 Aligned_cols=100 Identities=13% Similarity=0.036 Sum_probs=54.6
Q ss_pred hhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEe
Q 037640 181 EHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIW 260 (398)
Q Consensus 181 ~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 260 (398)
..++-++|.+.+ ..+++.|... ....+.++..+.+-+++=.+....... .+ ...-.+..
T Consensus 20 A~~lg~~La~~g---~~lv~Gg~~G-----lM~a~a~ga~~~gg~viGVlp~~l~~~------~~-------~~~~~i~~ 78 (159)
T TIGR00725 20 AYRLGKELAKKG---HILINGGRTG-----VMEAVSKGAREAGGLVVGILPDEDFAG------NP-------YLTIKVKT 78 (159)
T ss_pred HHHHHHHHHHCC---CEEEcCCchh-----HHHHHHHHHHHCCCeEEEECChhhccC------CC-------CceEEEEC
Confidence 356667776543 4556644333 345566666556655554443221000 00 01112233
Q ss_pred ec-CchhhhhcCCCcceeeecCCchhHHH---HHHhCCCEeeccc
Q 037640 261 DW-APQVLILSHPSVGGFLTHCGWNSTLE---GVCAGLPLLTWPL 301 (398)
Q Consensus 261 ~~-~pq~~~L~~~~~~~~ithgG~~s~~e---al~~GvP~l~~P~ 301 (398)
++ .+...++...+-..++--||.||+.| ++.+++|+++++.
T Consensus 79 ~~~~~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 79 GMNFARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred CCcchHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 44 45666665555555666788887655 5889999999885
No 165
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=55.00 E-value=70 Score=33.27 Aligned_cols=28 Identities=14% Similarity=0.255 Sum_probs=23.0
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++.+|.+.++|+|++-
T Consensus 63 ~~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 63 KVGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 4455888887 458999999999999984
No 166
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=54.94 E-value=2.1e+02 Score=27.69 Aligned_cols=82 Identities=17% Similarity=0.084 Sum_probs=59.5
Q ss_pred CCeEE-eecCc---hhhhhcCCCcceeeec--CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 255 RGLVI-WDWAP---QVLILSHPSVGGFLTH--CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 255 ~~v~~-~~~~p---q~~~L~~~~~~~~ith--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
.++.+ .+++| ...+|+.++++.|.+. =|.|++.-.++.|+|++.- .+-+. -+-+. +.|+=+....+
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~-~~~l~-~~~ipVlf~~d--- 316 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPF-WQDLK-EQGIPVLFYGD--- 316 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChH-HHHHH-hCCCeEEeccc---
Confidence 56654 57888 5568999999887764 5899999999999999875 33333 33442 56766665544
Q ss_pred CccccccccccccHHHHHHHHHHHhc
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVERLMD 354 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~vl~ 354 (398)
+++...|+++=+.+..
T Consensus 317 ----------~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 317 ----------ELDEALVREAQRQLAN 332 (360)
T ss_pred ----------cCCHHHHHHHHHHHhh
Confidence 6899999999887653
No 167
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=53.91 E-value=2.2e+02 Score=27.62 Aligned_cols=146 Identities=10% Similarity=0.128 Sum_probs=84.7
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHhC---------CC-CEEEEEeCCCCchhhhhccCchhHHHHhcC---CCeE-
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEAS---------NR-PFIWVIREGETSKELKKWVVEDGFEERIKG---RGLV- 258 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~---------~~-~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~v~- 258 (398)
+++.++||- ....+.|.+..+++|+..- +. .++..+.++.+ +-+.+.+.+.. .++.
T Consensus 253 ~~pallvsS--TswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP--------lkE~Y~~~I~~~~~~~v~~ 322 (444)
T KOG2941|consen 253 ERPALLVSS--TSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP--------LKEKYSQEIHEKNLQHVQV 322 (444)
T ss_pred CCCeEEEec--CCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc--------hhHHHHHHHHHhcccceee
Confidence 455777764 3334567777788888711 12 33333333322 33444444433 2333
Q ss_pred EeecCc---hhhhhcCCCcceeeecCCch-----hHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCc
Q 037640 259 IWDWAP---QVLILSHPSVGGFLTHCGWN-----STLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTW 330 (398)
Q Consensus 259 ~~~~~p---q~~~L~~~~~~~~ithgG~~-----s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~ 330 (398)
...|+. ...+|+.+++++.+|-.-.| -+..-.-+|+|++.+-+-. -..+++.---|...
T Consensus 323 ~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkc-----l~ELVkh~eNGlvF-------- 389 (444)
T KOG2941|consen 323 CTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKC-----LDELVKHGENGLVF-------- 389 (444)
T ss_pred eecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchh-----HHHHHhcCCCceEe--------
Confidence 346765 44589999998888765544 4566677888888775432 22333333344444
Q ss_pred cccccccccccHHHHHHHHHHHhc----cCcchHHHHHHHHHHH
Q 037640 331 GEEQNIGVLVKRDDVKNAVERLMD----EGNDGEERRNRALNLA 370 (398)
Q Consensus 331 ~~~~~~~~~~~~~~l~~ai~~vl~----~~~~~~~~~~~a~~l~ 370 (398)
-+.++|.+-+.-++. |.++..++++|+++-+
T Consensus 390 ---------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~ 424 (444)
T KOG2941|consen 390 ---------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQ 424 (444)
T ss_pred ---------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHH
Confidence 367888888888877 5555666666666553
No 168
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=52.82 E-value=46 Score=31.80 Aligned_cols=94 Identities=10% Similarity=0.073 Sum_probs=58.4
Q ss_pred CceEEEeeC-Cccc---CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeE-Eee--cCchh
Q 037640 194 KSVVYACLG-SMCN---LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLV-IWD--WAPQV 266 (398)
Q Consensus 194 ~~vv~vs~G-s~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~-~~~--~~pq~ 266 (398)
++.|.++-| |... .+.+.+.++++.+.+.++++++..+. .+.. .-+.+.... .+.. +.+ -+.|.
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~-~e~e------~~~~i~~~~--~~~~~l~~k~sL~e~ 245 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP-DEEE------RAEEIAKGL--PNAVILAGKTSLEEL 245 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh-HHHH------HHHHHHHhc--CCccccCCCCCHHHH
Confidence 468888888 4423 77899999999999988666665444 2211 111222211 2211 333 23344
Q ss_pred -hhhcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 267 -LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 267 -~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
.+++++++ ||+-- .|-++=|.+.|+|+|++
T Consensus 246 ~~li~~a~l--~I~~D-Sg~~HlAaA~~~P~I~i 276 (334)
T COG0859 246 AALIAGADL--VIGND-SGPMHLAAALGTPTIAL 276 (334)
T ss_pred HHHHhcCCE--EEccC-ChHHHHHHHcCCCEEEE
Confidence 47778887 88763 46677788899999986
No 169
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=52.10 E-value=30 Score=29.28 Aligned_cols=35 Identities=23% Similarity=0.085 Sum_probs=27.7
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEE
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVI 230 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 230 (398)
.+|+|+||.......+++..+++|.+.+.--|+..
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 69999999999888888889999988765334443
No 170
>PRK08322 acetolactate synthase; Reviewed
Probab=51.01 E-value=83 Score=32.34 Aligned_cols=28 Identities=18% Similarity=0.310 Sum_probs=23.2
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++.||...++|+|++-
T Consensus 63 ~~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 63 KAGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 4555888887 458999999999999985
No 171
>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.77 E-value=2.2e+02 Score=26.75 Aligned_cols=54 Identities=22% Similarity=0.095 Sum_probs=35.3
Q ss_pred CeEEeecCchhh---hhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHH
Q 037640 256 GLVIWDWAPQVL---ILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLA 312 (398)
Q Consensus 256 ~v~~~~~~pq~~---~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v 312 (398)
.+++.+|+||.+ +|.-+++.++ =|--|...|..+|+|.+=-=+.-|....-+++
T Consensus 239 rvvklPFvpqddyd~LL~lcD~n~V---RGEDSFVRAq~agkPflWHIYpQdentHl~KL 295 (370)
T COG4394 239 RVVKLPFVPQDDYDELLWLCDFNLV---RGEDSFVRAQLAGKPFLWHIYPQDENTHLAKL 295 (370)
T ss_pred EEEEecCCcHhHHHHHHHhccccee---ecchHHHHHHHcCCCcEEEecCCccccHHHHH
Confidence 456678999885 6766666222 26789999999999987533333333333444
No 172
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=50.53 E-value=1.7e+02 Score=27.18 Aligned_cols=96 Identities=14% Similarity=0.188 Sum_probs=58.5
Q ss_pred eEEEeeCCccc--CCHHHHHH----HHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEE-----eecCc
Q 037640 196 VVYACLGSMCN--LIPSQMME----LGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVI-----WDWAP 264 (398)
Q Consensus 196 vv~vs~Gs~~~--~~~~~~~~----~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~-----~~~~p 264 (398)
|.++-.|+... ..+++... +.+.+++.+.+|+.++....... .-.-+...+.....++ .++=|
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~------~~s~l~~~l~s~~~i~w~~~d~g~NP 237 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDT------VKSILKNNLNSSPGIVWNNEDTGYNP 237 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHH------HHHHHHhccccCceeEeCCCCCCCCc
Confidence 65666666655 44444443 56666778999999987653211 1111111122222222 24568
Q ss_pred hhhhhcCCCcceeeecCC-chhHHHHHHhCCCEeec
Q 037640 265 QVLILSHPSVGGFLTHCG-WNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 265 q~~~L~~~~~~~~ithgG-~~s~~eal~~GvP~l~~ 299 (398)
.-+.|+.++. +|.-.. .|-..||++.|+|+-+.
T Consensus 238 Y~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 238 YIDMLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred hHHHHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 8899988876 666555 57789999999997663
No 173
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=49.57 E-value=84 Score=29.54 Aligned_cols=93 Identities=13% Similarity=0.040 Sum_probs=54.4
Q ss_pred hhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEee
Q 037640 182 HKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWD 261 (398)
Q Consensus 182 ~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~ 261 (398)
.+++......+=.++-+-........+...+..+.++.++.|.++++-+|....... +.. . ...+
T Consensus 116 ~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~-----~~~---------~-~~~p 180 (293)
T COG2159 116 EELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGAG-----LEK---------G-HSDP 180 (293)
T ss_pred HHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCcc-----ccc---------C-CCCc
Confidence 566666654332223333333343455666788999999999999998776431100 000 0 0111
Q ss_pred cCchhhhhcCCCcceeeecCC--chhHHHH
Q 037640 262 WAPQVLILSHPSVGGFLTHCG--WNSTLEG 289 (398)
Q Consensus 262 ~~pq~~~L~~~~~~~~ithgG--~~s~~ea 289 (398)
+.=..-...+|+++.++.|+| ..=..|+
T Consensus 181 ~~~~~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 181 LYLDDVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred hHHHHHHHHCCCCcEEEEecCCCCchhHHH
Confidence 122334567899999999999 5555555
No 174
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=49.38 E-value=32 Score=29.48 Aligned_cols=33 Identities=12% Similarity=0.247 Sum_probs=23.0
Q ss_pred cCCCcceeeecCCchhHHHHHHhCCCEeeccccc
Q 037640 270 SHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFA 303 (398)
Q Consensus 270 ~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~ 303 (398)
.+..+.++|++||...+..... ++|+|-+|..+
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 5566677999999998888877 99999999854
No 175
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=49.08 E-value=65 Score=33.33 Aligned_cols=80 Identities=11% Similarity=0.020 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchh--h-------hhcCCCcceeeecC
Q 037640 211 QMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQV--L-------ILSHPSVGGFLTHC 281 (398)
Q Consensus 211 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~--~-------~L~~~~~~~~ithg 281 (398)
..+.+++.|++.|.+.|..+.+..... +-+.+. ..+++.... ..+. . -..+...+++++|.
T Consensus 15 ~~~~l~~~L~~~GV~~vFgvpG~~~~~------l~dal~---~~~~i~~i~-~~hE~~A~~~Adgyar~tg~~gv~~~t~ 84 (564)
T PRK08155 15 GAELIVRLLERQGIRIVTGIPGGAILP------LYDALS---QSTQIRHIL-ARHEQGAGFIAQGMARTTGKPAVCMACS 84 (564)
T ss_pred HHHHHHHHHHHcCCCEEEeCCCcccHH------HHHHHh---ccCCceEEE-eccHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 356688888888888888776553211 112221 122333221 1111 1 11123444588887
Q ss_pred C------chhHHHHHHhCCCEeecc
Q 037640 282 G------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 282 G------~~s~~eal~~GvP~l~~P 300 (398)
| .+++.||...++|+|++-
T Consensus 85 GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 85 GPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 7 348999999999999985
No 176
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=47.93 E-value=3.2e+02 Score=27.82 Aligned_cols=109 Identities=12% Similarity=-0.022 Sum_probs=67.0
Q ss_pred eEEeecCchhh---hhcCCCcceeee---cCCchhH-HHHHHhCC----CEeecccccchhhhHHHHHHHhcceEEeccC
Q 037640 257 LVIWDWAPQVL---ILSHPSVGGFLT---HCGWNST-LEGVCAGL----PLLTWPLFADQFTNEKLAVHLLKIGVKIGVE 325 (398)
Q Consensus 257 v~~~~~~pq~~---~L~~~~~~~~it---hgG~~s~-~eal~~Gv----P~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 325 (398)
+.+.+.+|+.+ ++.-+++ ++. .-|+|-+ .|.++++. |+|.-=+. -|. +.+.-++.++.
T Consensus 364 ~~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefa-----Gaa---~~l~~AllVNP- 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFA-----GAA---VELKGALLTNP- 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEeccc-----cch---hhcCCCEEECC-
Confidence 34556778765 4445555 443 4588854 59999987 55544332 222 24555777765
Q ss_pred CCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 037640 326 NPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMKH 397 (398)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 397 (398)
.+.+++.++|.+.|+.+. ++-+++.+++.+.++ ..+...=.+.+++++..+
T Consensus 433 --------------~d~~~~A~ai~~AL~m~~--~Er~~R~~~l~~~v~-----~~d~~~W~~~fl~~l~~~ 483 (487)
T TIGR02398 433 --------------YDPVRMDETIYVALAMPK--AEQQARMREMFDAVN-----YYDVQRWADEFLAAVSPQ 483 (487)
T ss_pred --------------CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHh-----hCCHHHHHHHHHHHhhhc
Confidence 489999999999998642 233455555555544 334445566777777654
No 177
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=47.27 E-value=1.6e+02 Score=29.35 Aligned_cols=27 Identities=19% Similarity=0.385 Sum_probs=22.5
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeec
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~ 299 (398)
+.+++++|+| .++++||.+.++|+|++
T Consensus 63 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 63 RPVAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CCEEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 3455888888 45889999999999999
No 178
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=46.91 E-value=1.2e+02 Score=31.54 Aligned_cols=28 Identities=14% Similarity=0.186 Sum_probs=23.4
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++.+|...++|+|++-
T Consensus 68 ~~gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 68 RMGMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4556999988 458899999999999995
No 179
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=46.46 E-value=54 Score=27.05 Aligned_cols=39 Identities=23% Similarity=0.170 Sum_probs=31.0
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeC
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIRE 232 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 232 (398)
...+|++++||......+.++++++.+. .+.++++....
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~~ 88 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNPH 88 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEECC
Confidence 3459999999999988899999999884 46788876543
No 180
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=46.28 E-value=35 Score=27.57 Aligned_cols=37 Identities=8% Similarity=0.228 Sum_probs=28.4
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHHh--CCCCEEEEEe
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLEA--SNRPFIWVIR 231 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~~--~~~~~i~~~~ 231 (398)
.+++++|||......+.+..+.+.+++ .+..|-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 489999999998555677788888864 4567788764
No 181
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=45.89 E-value=23 Score=34.26 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=55.2
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCch-hHHHH-hcCCCeE--------------E
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVED-GFEER-IKGRGLV--------------I 259 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~-~~~~~-~~~~~v~--------------~ 259 (398)
+++.+.||.+..-+ ..++++.|++.++.++|..........+ +|+ ++.-. +...++. +
T Consensus 4 i~~~~GGTGGHi~P--ala~a~~l~~~g~~v~~vg~~~~~e~~l----~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 77 (352)
T PRK12446 4 IVFTGGGSAGHVTP--NLAIIPYLKEDNWDISYIGSHQGIEKTI----IEKENIPYYSISSGKLRRYFDLKNIKDPFLVM 77 (352)
T ss_pred EEEEcCCcHHHHHH--HHHHHHHHHhCCCEEEEEECCCcccccc----CcccCCcEEEEeccCcCCCchHHHHHHHHHHH
Confidence 77888888886443 2357777777899999987554321111 221 11000 0000100 0
Q ss_pred eecCchhhhhcCCCcceeeecCCchh---HHHHHHhCCCEeec
Q 037640 260 WDWAPQVLILSHPSVGGFLTHCGWNS---TLEGVCAGLPLLTW 299 (398)
Q Consensus 260 ~~~~pq~~~L~~~~~~~~ithgG~~s---~~eal~~GvP~l~~ 299 (398)
..+..-..++..-+-.++|+|||.-| .+.|...|+|++..
T Consensus 78 ~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 78 KGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEE
Confidence 00111112455444444999999986 89999999999874
No 182
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=45.68 E-value=37 Score=31.00 Aligned_cols=38 Identities=21% Similarity=0.402 Sum_probs=30.4
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccH-------HHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYT-------AQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~-------~~vA~~lgIP~v~~ 59 (398)
.+.+.++|++ .++|+|| |..-+++ ..+|+..|||++.|
T Consensus 55 ~e~l~~~l~e--~~i~llI-DATHPyAa~iS~Na~~aake~gipy~r~ 99 (257)
T COG2099 55 AEGLAAFLRE--EGIDLLI-DATHPYAARISQNAARAAKETGIPYLRL 99 (257)
T ss_pred HHHHHHHHHH--cCCCEEE-ECCChHHHHHHHHHHHHHHHhCCcEEEE
Confidence 4688999999 8999877 7666654 44578899999986
No 183
>PRK10637 cysG siroheme synthase; Provisional
Probab=44.66 E-value=1.1e+02 Score=30.77 Aligned_cols=35 Identities=14% Similarity=0.048 Sum_probs=22.8
Q ss_pred cHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHH
Q 037640 341 KRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAI 377 (398)
Q Consensus 341 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~ 377 (398)
-...|++.|.+++ ++....+-+.+.++++.++...
T Consensus 135 ~a~~lr~~ie~~~--~~~~~~~~~~~~~~R~~~k~~~ 169 (457)
T PRK10637 135 LARLLREKLESLL--PQHLGQVAKYAGQLRGRVKQQF 169 (457)
T ss_pred HHHHHHHHHHHhc--chhHHHHHHHHHHHHHHHHHhc
Confidence 4466888888877 3334566666777777776553
No 184
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=43.10 E-value=1.1e+02 Score=31.62 Aligned_cols=28 Identities=18% Similarity=0.356 Sum_probs=22.6
Q ss_pred CcceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.|- +++.||...++|+|++-
T Consensus 78 ~~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 78 KPGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 44458888884 47899999999999984
No 185
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=42.78 E-value=3e+02 Score=26.91 Aligned_cols=97 Identities=20% Similarity=0.194 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCc-----hhHHHHhcCCCeEEeecCchhh---hhcCCCcceeee
Q 037640 208 IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVE-----DGFEERIKGRGLVIWDWAPQVL---ILSHPSVGGFLT 279 (398)
Q Consensus 208 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~v~~~~~~pq~~---~L~~~~~~~~it 279 (398)
....+..+++++++.+.++...+..+.....+..+ +. .+-..+.+.-.+.+.+|+||.+ +|..+++ =+-
T Consensus 193 e~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~-~~~~~~~~g~~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--NfV 269 (374)
T PF10093_consen 193 ENAALASLLDAWAASPKPVHLLVPEGRALNSLAAW-LGDALLQAGDSWQRGNLTLHVLPFVPQDDYDRLLWACDF--NFV 269 (374)
T ss_pred CchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHH-hccccccCccccccCCeEEEECCCCCHHHHHHHHHhCcc--ceE
Confidence 44457889999998888887777655432222111 11 0000011122355678999884 7777776 233
Q ss_pred cCCchhHHHHHHhCCCEeecccccchhhhHH
Q 037640 280 HCGWNSTLEGVCAGLPLLTWPLFADQFTNEK 310 (398)
Q Consensus 280 hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 310 (398)
. |--|...|..+|+|+|=-.+. |..+|.
T Consensus 270 R-GEDSfVRAqwAgkPFvWhIYp--Q~d~aH 297 (374)
T PF10093_consen 270 R-GEDSFVRAQWAGKPFVWHIYP--QEDDAH 297 (374)
T ss_pred e-cchHHHHHHHhCCCceEecCc--CchhhH
Confidence 3 667999999999999865544 444443
No 186
>PF06825 HSBP1: Heat shock factor binding protein 1; InterPro: IPR009643 Heat shock factor binding protein 1 (HSBP1) appears to be a negative regulator of the heat shock response [].; PDB: 3CI9_A.
Probab=42.68 E-value=34 Score=23.24 Aligned_cols=49 Identities=14% Similarity=0.226 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 037640 343 DDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMKH 397 (398)
Q Consensus 343 ~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 397 (398)
.+|...+..+|. .+..+-..++..+-..+.+=|+.-.++++-|.+++.+
T Consensus 2 ~elt~~v~~lL~------qmq~kFq~mS~~I~~riDeM~~RIDdLE~si~dl~~q 50 (54)
T PF06825_consen 2 QELTAFVQNLLQ------QMQDKFQTMSDQILGRIDEMSSRIDDLEKSIADLMTQ 50 (54)
T ss_dssp HHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH------
T ss_pred hHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 578889999996 8888888888888877777788778888888877654
No 187
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=42.57 E-value=46 Score=30.49 Aligned_cols=38 Identities=18% Similarity=0.379 Sum_probs=30.4
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccHH-------HHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYTA-------QIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~~-------~vA~~lgIP~v~~ 59 (398)
.+.+.++|++ +++++|| |..-+++. .+++.+|||++-|
T Consensus 54 ~~~l~~~l~~--~~i~~VI-DATHPfA~~is~~a~~ac~~~~ipyiR~ 98 (248)
T PRK08057 54 AEGLAAYLRE--EGIDLVI-DATHPYAAQISANAAAACRALGIPYLRL 98 (248)
T ss_pred HHHHHHHHHH--CCCCEEE-ECCCccHHHHHHHHHHHHHHhCCcEEEE
Confidence 4788999999 8999976 77766654 4578899999987
No 188
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=42.11 E-value=18 Score=36.50 Aligned_cols=66 Identities=14% Similarity=0.114 Sum_probs=41.4
Q ss_pred hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHH
Q 037640 284 NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERR 363 (398)
Q Consensus 284 ~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~ 363 (398)
-++.||+++|+|+++.= +-.-+..+ ...-.|..++.. .-....+.+++.++..|++.+..+.
T Consensus 380 iv~IEAMa~glPvvAt~----~GGP~EiV-~~~~tG~l~dp~-------------~e~~~~~a~~~~kl~~~p~l~~~~~ 441 (495)
T KOG0853|consen 380 IVPIEAMACGLPVVATN----NGGPAEIV-VHGVTGLLIDPG-------------QEAVAELADALLKLRRDPELWARMG 441 (495)
T ss_pred ceeHHHHhcCCCEEEec----CCCceEEE-EcCCcceeeCCc-------------hHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 37899999999999872 22223333 233345555432 2234479999999999995555554
Q ss_pred HHHH
Q 037640 364 NRAL 367 (398)
Q Consensus 364 ~~a~ 367 (398)
++-.
T Consensus 442 ~~G~ 445 (495)
T KOG0853|consen 442 KNGL 445 (495)
T ss_pred HHHH
Confidence 4443
No 189
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=41.50 E-value=56 Score=27.76 Aligned_cols=29 Identities=14% Similarity=0.208 Sum_probs=22.0
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeeccc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWPL 301 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P~ 301 (398)
+..++++|.| .+++.+|...++|+|++.-
T Consensus 64 ~~~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 64 RPGVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp SEEEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred cceEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 3444888887 4588899999999999874
No 190
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=40.98 E-value=1.4e+02 Score=30.99 Aligned_cols=28 Identities=11% Similarity=0.152 Sum_probs=22.7
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
..+++++|.| .+++.+|...++|||++-
T Consensus 68 ~~gv~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 68 VPGVCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 3445888888 458899999999999985
No 191
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=40.90 E-value=1.1e+02 Score=26.20 Aligned_cols=43 Identities=21% Similarity=0.264 Sum_probs=32.4
Q ss_pred hchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHc-CCCeEEEe
Q 037640 17 KLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKF-NVPRIAFH 60 (398)
Q Consensus 17 ~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~l-gIP~v~~~ 60 (398)
.....+.++.++ +..||+||..+.+..+.-+-+.+ ++|.+.+.
T Consensus 52 av~~a~~~L~~~-Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 52 AVARAARQLRAQ-GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred HHHHHHHHHHHc-CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEE
Confidence 334444444444 68899999999888888888998 89999863
No 192
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=40.82 E-value=33 Score=31.65 Aligned_cols=39 Identities=3% Similarity=0.067 Sum_probs=26.1
Q ss_pred ceEEEeeCCcccCCHH-HHHHHHHHHHh--CCCCEEEEEeCC
Q 037640 195 SVVYACLGSMCNLIPS-QMMELGLGLEA--SNRPFIWVIREG 233 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~-~~~~~~~al~~--~~~~~i~~~~~~ 233 (398)
.++++||||...-..+ .+..+-+.+++ .++.|.|.+.+.
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 4899999999886544 67778888876 588999998654
No 193
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=40.78 E-value=58 Score=30.38 Aligned_cols=75 Identities=19% Similarity=0.271 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhH
Q 037640 207 LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNST 286 (398)
Q Consensus 207 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~ 286 (398)
.+.+..+++.+|+.......||..++.... ..+.++++...+-+||+. ||=+.-..++
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGG~ga--------------------~rlL~~ld~~~~~~~pK~--~iGySDiTaL 103 (282)
T cd07025 46 TDEERAADLNAAFADPEIKAIWCARGGYGA--------------------NRLLPYLDYDLIRANPKI--FVGYSDITAL 103 (282)
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCcCCH--------------------HHhhhhCCHHHHhhCCeE--EEEecHHHHH
Confidence 345667789999999999999999876421 123345555555567766 8777777777
Q ss_pred HHHHHh--CCCEeeccccc
Q 037640 287 LEGVCA--GLPLLTWPLFA 303 (398)
Q Consensus 287 ~eal~~--GvP~l~~P~~~ 303 (398)
+-+++. |++.+.-|...
T Consensus 104 ~~~l~~~~g~~t~hGp~~~ 122 (282)
T cd07025 104 HLALYAKTGLVTFHGPMLA 122 (282)
T ss_pred HHHHHHhcCceEEECcccc
Confidence 777653 77777777543
No 194
>PRK04940 hypothetical protein; Provisional
Probab=40.69 E-value=62 Score=28.03 Aligned_cols=31 Identities=10% Similarity=0.030 Sum_probs=26.6
Q ss_pred CCcEEEECCCc-ccHHHHHHHcCCCeEEEech
Q 037640 32 QPNCIISDVCL-PYTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 32 ~~D~VI~D~~~-~~~~~vA~~lgIP~v~~~~~ 62 (398)
++.++|-..+. +||.-+|+++|+|.|.++|.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPA 91 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPN 91 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCC
Confidence 56788888876 69999999999999998775
No 195
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=40.39 E-value=93 Score=32.15 Aligned_cols=82 Identities=10% Similarity=0.055 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCc--------hhhhhcCCCcceeeecC
Q 037640 210 SQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAP--------QVLILSHPSVGGFLTHC 281 (398)
Q Consensus 210 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~p--------q~~~L~~~~~~~~ithg 281 (398)
...+.+++.|++.|.+.++.+.+..... +-+.+ ...+++....-.- ..--......+++++|.
T Consensus 10 ~~a~~l~~~L~~~GV~~vFgvpG~~~~~------l~~~l---~~~~~i~~v~~~hE~~A~~aAdgyar~tg~~~v~~vt~ 80 (568)
T PRK07449 10 LWAAVILEELTRLGVRHVVIAPGSRSTP------LTLAA---AEHPRLRLHTHFDERSAGFLALGLAKASKRPVAVIVTS 80 (568)
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCccHH------HHHHH---HhCCCcEEEeecCcccHHHHHHHHHHhhCCCEEEEECC
Confidence 3445688888888888888776653211 11111 1123333322111 11011112344488888
Q ss_pred C------chhHHHHHHhCCCEeecc
Q 037640 282 G------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 282 G------~~s~~eal~~GvP~l~~P 300 (398)
| .++++||-..++|||++.
T Consensus 81 GpG~~N~l~~i~~A~~~~~Pvl~Is 105 (568)
T PRK07449 81 GTAVANLYPAVIEAGLTGVPLIVLT 105 (568)
T ss_pred ccHHHhhhHHHHHHhhcCCcEEEEE
Confidence 8 458999999999999994
No 196
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=40.12 E-value=58 Score=29.97 Aligned_cols=42 Identities=12% Similarity=0.114 Sum_probs=30.6
Q ss_pred hHHHHHHHhhcCCCCcEEEE-----CCCc-ccHHHHHHHcCCCeEEEech
Q 037640 19 LEPVENLFGQLKPQPNCIIS-----DVCL-PYTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~-----D~~~-~~~~~vA~~lgIP~v~~~~~ 62 (398)
...|.+.+++ ..||+||+ |... .-+..+|+.||+|++.+...
T Consensus 101 A~~La~ai~~--~~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 101 ASALAAAAQK--AGFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred HHHHHHHHHH--hCCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 3456667777 67999997 4332 35788999999999986543
No 197
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=39.89 E-value=49 Score=30.29 Aligned_cols=39 Identities=18% Similarity=0.412 Sum_probs=30.6
Q ss_pred chHHHHHHHhhcCCCCcEEEECCCcccHH-------HHHHHcCCCeEEE
Q 037640 18 LLEPVENLFGQLKPQPNCIISDVCLPYTA-------QIAGKFNVPRIAF 59 (398)
Q Consensus 18 ~~~~l~~~L~~~~~~~D~VI~D~~~~~~~-------~vA~~lgIP~v~~ 59 (398)
-...+.++|++ .++++|| |..-+++. .+|+.+|||++-|
T Consensus 54 ~~~~l~~~l~~--~~i~~vI-DATHPfA~~is~na~~a~~~~~ipylR~ 99 (249)
T PF02571_consen 54 DEEGLAEFLRE--NGIDAVI-DATHPFAAEISQNAIEACRELGIPYLRF 99 (249)
T ss_pred CHHHHHHHHHh--CCCcEEE-ECCCchHHHHHHHHHHHHhhcCcceEEE
Confidence 35788899999 8999887 77666654 4578889999987
No 198
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=39.38 E-value=62 Score=31.05 Aligned_cols=44 Identities=11% Similarity=0.333 Sum_probs=32.1
Q ss_pred HHHhchHHHHHHHhhcCCCCcEEEECCCcc-------cH---HHHHHHcCCCeEEE
Q 037640 14 AADKLLEPVENLFGQLKPQPNCIISDVCLP-------YT---AQIAGKFNVPRIAF 59 (398)
Q Consensus 14 a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~-------~~---~~vA~~lgIP~v~~ 59 (398)
..+.....+.+++++ .+||++|+=+.+- |+ ..+.++++||.|.-
T Consensus 64 n~eea~~~i~~mv~~--~~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vta 117 (349)
T PF07355_consen 64 NKEEALKKILEMVKK--LKPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTA 117 (349)
T ss_pred CHHHHHHHHHHHHHh--cCCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEE
Confidence 344556677778888 8999999998663 22 23567899999963
No 199
>KOG4117 consensus Heat shock factor binding protein [Transcription; Posttranslational modification, protein turnover, chaperones]
Probab=38.96 E-value=1.3e+02 Score=20.96 Aligned_cols=51 Identities=14% Similarity=0.238 Sum_probs=43.0
Q ss_pred cHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHcC
Q 037640 341 KRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMKH 397 (398)
Q Consensus 341 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 397 (398)
+..+|...|..+|. ....+-..+++.+-....+=++.-.++++-|++++.+
T Consensus 13 Nmq~LTs~vQ~lLQ------q~QDkFQtMSDQII~RiDDM~~riDDLEKnIaDLm~q 63 (73)
T KOG4117|consen 13 NMQDLTSVVQGLLQ------QTQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQ 63 (73)
T ss_pred cHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 67889999999996 6678888889888877777888888999999998754
No 200
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=37.90 E-value=37 Score=30.87 Aligned_cols=32 Identities=22% Similarity=0.342 Sum_probs=24.0
Q ss_pred CCCcEE-EECCCc-ccHHHHHHHcCCCeEEEech
Q 037640 31 PQPNCI-ISDVCL-PYTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 31 ~~~D~V-I~D~~~-~~~~~vA~~lgIP~v~~~~~ 62 (398)
.-||++ |.|+.. --|..=|.++|||+|.+.-+
T Consensus 155 ~~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDT 188 (252)
T COG0052 155 GLPDVLFVIDPRKEKIAVKEANKLGIPVVALVDT 188 (252)
T ss_pred CCCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecC
Confidence 459976 667754 46777799999999987444
No 201
>COG1422 Predicted membrane protein [Function unknown]
Probab=37.04 E-value=73 Score=27.96 Aligned_cols=71 Identities=15% Similarity=0.138 Sum_probs=46.5
Q ss_pred hHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHH
Q 037640 285 STLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRN 364 (398)
Q Consensus 285 s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~ 364 (398)
|..++++-+.=.+..|+..=++..--.++ +| +.-.-+...+++.+.|-++.+++++
T Consensus 24 ~~~~~i~~~ln~~f~P~i~~~~p~lvilV----~a--------------------vi~gl~~~i~~~~liD~ekm~~~qk 79 (201)
T COG1422 24 SIRDGIGGALNVVFGPLLSPLPPHLVILV----AA--------------------VITGLYITILQKLLIDQEKMKELQK 79 (201)
T ss_pred HHHHHHHHHHHHHHhhhccccccHHHHHH----HH--------------------HHHHHHHHHHHHHhccHHHHHHHHH
Confidence 66666666666666666544333222221 01 2333455677788888888889999
Q ss_pred HHHHHHHHHHHHHhc
Q 037640 365 RALNLAKMAKMAIQE 379 (398)
Q Consensus 365 ~a~~l~~~~~~~~~~ 379 (398)
.++++++.+++|-++
T Consensus 80 ~m~efq~e~~eA~~~ 94 (201)
T COG1422 80 MMKEFQKEFREAQES 94 (201)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998443
No 202
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=36.59 E-value=1e+02 Score=31.84 Aligned_cols=28 Identities=18% Similarity=0.258 Sum_probs=23.2
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++++|...++|||++-
T Consensus 66 ~~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 66 KVGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 4555899988 458999999999999984
No 203
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=36.30 E-value=2.5e+02 Score=28.98 Aligned_cols=28 Identities=11% Similarity=0.102 Sum_probs=23.0
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++++|...++|+|++-
T Consensus 71 ~~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 104 (557)
T PRK08199 71 RPGICFVTRGPGATNASIGVHTAFQDSTPMILFV 104 (557)
T ss_pred CCEEEEeCCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4555999988 458999999999999883
No 204
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=35.82 E-value=1.1e+02 Score=30.32 Aligned_cols=50 Identities=6% Similarity=0.083 Sum_probs=37.7
Q ss_pred HHhchHHHHHHHhhcCCCCcEEEECCCcc----cHHHHHH---HcCCCeEEEechhHHH
Q 037640 15 ADKLLEPVENLFGQLKPQPNCIISDVCLP----YTAQIAG---KFNVPRIAFHGTCCFS 66 (398)
Q Consensus 15 ~~~~~~~l~~~L~~~~~~~D~VI~D~~~~----~~~~vA~---~lgIP~v~~~~~~~~~ 66 (398)
.+.+.+.+.+.|++ .++|+||--+.|. |+..+++ +.|||.|.+.+....+
T Consensus 321 a~~~g~eIa~~Lk~--dgVDAvILtstCgtCtrcga~m~keiE~~GIPvV~i~~~~pI~ 377 (431)
T TIGR01917 321 SKQFAKEFSKELLA--AGVDAVILTSTUGTCTRCGATMVKEIERAGIPVVHICTVTPIA 377 (431)
T ss_pred HHHHHHHHHHHHHH--cCCCEEEEcCCCCcchhHHHHHHHHHHHcCCCEEEEeechhHH
Confidence 34577888888888 8999999987763 5555654 4699999987765554
No 205
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=35.48 E-value=4e+02 Score=25.59 Aligned_cols=112 Identities=16% Similarity=0.195 Sum_probs=56.9
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhh-hhcCCCcceeeecCCchhH------
Q 037640 214 ELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVL-ILSHPSVGGFLTHCGWNST------ 286 (398)
Q Consensus 214 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~-~L~~~~~~~~ithgG~~s~------ 286 (398)
.+++++.+.+.+++.+.+-... .++ |.--.+ +....+-.+.++|||..+.
T Consensus 191 ~LL~~va~~~kPViLk~G~~~t---i~E--------------------~l~A~e~i~~~GN~~viL~erG~~tf~~~~~~ 247 (335)
T PRK08673 191 DLLKEVGKTNKPVLLKRGMSAT---IEE--------------------WLMAAEYILAEGNPNVILCERGIRTFETATRN 247 (335)
T ss_pred HHHHHHHcCCCcEEEeCCCCCC---HHH--------------------HHHHHHHHHHcCCCeEEEEECCCCCCCCcChh
Confidence 4666667789999998875421 111 211111 2333333448888875222
Q ss_pred ------HHHH--HhCCCEeecccccch-----hhhHHHHHHHhcc-eEEeccC--CCCCccccccccccccHHHHHHHHH
Q 037640 287 ------LEGV--CAGLPLLTWPLFADQ-----FTNEKLAVHLLKI-GVKIGVE--NPMTWGEEQNIGVLVKRDDVKNAVE 350 (398)
Q Consensus 287 ------~eal--~~GvP~l~~P~~~DQ-----~~na~~v~~~~g~-g~~l~~~--~~~~~~~~~~~~~~~~~~~l~~ai~ 350 (398)
...+ ..+.|+++.|-+.-. +.-++..+ .+|+ |+.++.. ....| .|+.-.++++++.+.++
T Consensus 248 ~ldl~ai~~lk~~~~lPVi~d~sH~~G~~~~v~~~a~AAv-A~GAdGliIE~H~~pd~al---sD~~~sl~p~e~~~lv~ 323 (335)
T PRK08673 248 TLDLSAVPVIKKLTHLPVIVDPSHATGKRDLVEPLALAAV-AAGADGLIVEVHPDPEKAL---SDGPQSLTPEEFEELMK 323 (335)
T ss_pred hhhHHHHHHHHHhcCCCEEEeCCCCCccccchHHHHHHHH-HhCCCEEEEEecCCcccCC---CcchhcCCHHHHHHHHH
Confidence 1111 247999998865422 23344443 6776 4555432 11111 33334466666665554
Q ss_pred HH
Q 037640 351 RL 352 (398)
Q Consensus 351 ~v 352 (398)
++
T Consensus 324 ~i 325 (335)
T PRK08673 324 KL 325 (335)
T ss_pred HH
Confidence 43
No 206
>PRK11269 glyoxylate carboligase; Provisional
Probab=35.28 E-value=2.1e+02 Score=29.85 Aligned_cols=28 Identities=14% Similarity=0.331 Sum_probs=23.1
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++++|...++|+|++.
T Consensus 68 ~~gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 101 (591)
T PRK11269 68 NIGVCIGTSGPAGTDMITGLYSASADSIPILCIT 101 (591)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3555777777 679999999999999984
No 207
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=35.28 E-value=59 Score=32.35 Aligned_cols=36 Identities=14% Similarity=0.389 Sum_probs=29.2
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEe
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFH 60 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~ 60 (398)
..+.+.+++ .+||++|.+. ....+|+++|||.+.+.
T Consensus 360 ~e~~~~i~~--~~pdliig~~---~~~~~a~~~gip~~~~~ 395 (430)
T cd01981 360 TEVGDMIAR--TEPELIFGTQ---MERHIGKRLDIPCAVIS 395 (430)
T ss_pred HHHHHHHHh--hCCCEEEecc---hhhHHHHHcCCCEEEEe
Confidence 567778888 8999999886 45567999999999763
No 208
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=35.25 E-value=1e+02 Score=30.50 Aligned_cols=50 Identities=8% Similarity=0.078 Sum_probs=37.9
Q ss_pred HHhchHHHHHHHhhcCCCCcEEEECCCcc----cHHHHHH---HcCCCeEEEechhHHH
Q 037640 15 ADKLLEPVENLFGQLKPQPNCIISDVCLP----YTAQIAG---KFNVPRIAFHGTCCFS 66 (398)
Q Consensus 15 ~~~~~~~l~~~L~~~~~~~D~VI~D~~~~----~~~~vA~---~lgIP~v~~~~~~~~~ 66 (398)
.+.+-+.+.+.|++ .++|+||--+.|. |+..+++ +.|||.|.+.+....+
T Consensus 321 a~~~g~eIa~~Lk~--dgVDAVILTstCgtC~r~~a~m~keiE~~GiPvv~~~~~~pis 377 (431)
T TIGR01918 321 SKQFAKEFVVELKQ--GGVDAVILTSTUGTCTRCGATMVKEIERAGIPVVHMCTVIPIA 377 (431)
T ss_pred HHHHHHHHHHHHHH--cCCCEEEEcCCCCcchhHHHHHHHHHHHcCCCEEEEeecccHh
Confidence 35677888888888 8999999987763 5555554 4699999987765554
No 209
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=34.95 E-value=61 Score=28.76 Aligned_cols=41 Identities=20% Similarity=0.324 Sum_probs=26.7
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcc-------cHHHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLP-------YTAQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~-------~~~~vA~~lgIP~v~~ 59 (398)
.+.+.++++++..++|+|++|-... .|..++-.+++|+|..
T Consensus 76 ~P~~l~~l~~l~~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGV 123 (206)
T PF04493_consen 76 LPCILEALEKLKNKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGV 123 (206)
T ss_dssp HHHHHHHHHTSSS--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEE
T ss_pred HHHHHHHHHHhcccCCEEEEeCceeecCCCcChhheeeeccCCCEEEE
Confidence 4677778887778999999998643 2445556668999975
No 210
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=34.88 E-value=91 Score=26.53 Aligned_cols=30 Identities=17% Similarity=0.194 Sum_probs=22.5
Q ss_pred CceEEEeeCCcccCCHHHHHHHHHHHHhCC
Q 037640 194 KSVVYACLGSMCNLIPSQMMELGLGLEASN 223 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 223 (398)
+..+|+++||......+.+...++.|...+
T Consensus 7 ~~~v~i~LGSNlg~~~~~l~~A~~~L~~~~ 36 (163)
T PRK14092 7 SALAYVGLGANLGDAAATLRSVLAELAAAP 36 (163)
T ss_pred CCEEEEEecCchHhHHHHHHHHHHHHHhCC
Confidence 347999999998766667777777776643
No 211
>PRK05858 hypothetical protein; Provisional
Probab=34.43 E-value=2.4e+02 Score=28.97 Aligned_cols=27 Identities=15% Similarity=0.145 Sum_probs=22.0
Q ss_pred cceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 274 VGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 274 ~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
.+++++|.| .+++++|...++|+|++.
T Consensus 68 ~gv~~~t~GpG~~n~~~~i~~A~~~~~Pvl~i~ 100 (542)
T PRK05858 68 PGVAVLTAGPGVTNGMSAMAAAQFNQSPLVVLG 100 (542)
T ss_pred CeEEEEcCCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 344788877 458999999999999985
No 212
>PRK12342 hypothetical protein; Provisional
Probab=33.89 E-value=79 Score=29.05 Aligned_cols=42 Identities=5% Similarity=-0.009 Sum_probs=30.5
Q ss_pred hHHHHHHHhhcCCCCcEEEECCC-----c-ccHHHHHHHcCCCeEEEech
Q 037640 19 LEPVENLFGQLKPQPNCIISDVC-----L-PYTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~-----~-~~~~~vA~~lgIP~v~~~~~ 62 (398)
...|.+.++. .+||+|++=-. . .-+..+|+.||+|++.+...
T Consensus 98 a~~La~~i~~--~~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 98 AKALAAAIEK--IGFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred HHHHHHHHHH--hCCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 3456667777 57999997432 2 24788999999999986543
No 213
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=33.40 E-value=68 Score=32.84 Aligned_cols=37 Identities=14% Similarity=0.329 Sum_probs=29.9
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEe
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFH 60 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~ 60 (398)
...+.+.|++ .+||+||.+. +...+|+++|||++.++
T Consensus 363 ~~ei~~~I~~--~~pdliiGs~---~er~ia~~lgiP~~~is 399 (513)
T CHL00076 363 HTEVGDMIAR--VEPSAIFGTQ---MERHIGKRLDIPCGVIS 399 (513)
T ss_pred HHHHHHHHHh--cCCCEEEECc---hhhHHHHHhCCCEEEee
Confidence 4567778888 8999999886 56667999999998753
No 214
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=33.20 E-value=4.4e+02 Score=25.13 Aligned_cols=79 Identities=16% Similarity=0.125 Sum_probs=55.1
Q ss_pred CCeEE-eecCc---hhhhhcCCCcceeeec--CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 255 RGLVI-WDWAP---QVLILSHPSVGGFLTH--CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 255 ~~v~~-~~~~p---q~~~L~~~~~~~~ith--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
.++.+ .+++| ..++|+.++++.|+++ =|.|++.-.++.|||+++-- +-+.+.. +. +.|+-+-.+.+
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqd-l~-e~gv~Vlf~~d--- 277 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQD-LT-EQGLPVLFTGD--- 277 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHH-HH-hCCCeEEecCC---
Confidence 46554 46776 6679999999888886 48899999999999999862 3333333 32 56666655554
Q ss_pred CccccccccccccHHHHHHHHHH
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVER 351 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~ 351 (398)
.++...+.++=++
T Consensus 278 ----------~L~~~~v~e~~rq 290 (322)
T PRK02797 278 ----------DLDEDIVREAQRQ 290 (322)
T ss_pred ----------cccHHHHHHHHHH
Confidence 5787777776444
No 215
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=33.17 E-value=55 Score=27.99 Aligned_cols=40 Identities=13% Similarity=0.097 Sum_probs=27.2
Q ss_pred chHHHHHHHhhcCCCCcEEEECCCccc--HHHHHHHcCCCeEEEe
Q 037640 18 LLEPVENLFGQLKPQPNCIISDVCLPY--TAQIAGKFNVPRIAFH 60 (398)
Q Consensus 18 ~~~~l~~~L~~~~~~~D~VI~D~~~~~--~~~vA~~lgIP~v~~~ 60 (398)
..+.++.+++- +||+||......- ....-+..|||++.+.
T Consensus 58 ~~~n~E~ll~l---~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 58 GSLNVELIVAL---KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCCCHHHHhcc---CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 34667777765 9999998654322 3344567899998763
No 216
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=33.14 E-value=78 Score=27.54 Aligned_cols=44 Identities=20% Similarity=0.410 Sum_probs=30.7
Q ss_pred HHHHHHHhhcCCCCcEEEECCCc-ccHHHHHHHcCCCeEEEechh
Q 037640 20 EPVENLFGQLKPQPNCIISDVCL-PYTAQIAGKFNVPRIAFHGTC 63 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~-~~~~~vA~~lgIP~v~~~~~~ 63 (398)
..+.+++++...+..++|-..+. .+|..+|+++++|.|.+.|..
T Consensus 47 ~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav 91 (187)
T PF05728_consen 47 AQLEQLIEELKPENVVLIGSSLGGFYATYLAERYGLPAVLINPAV 91 (187)
T ss_pred HHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCC
Confidence 34556666622223588887776 588889999999999887763
No 217
>COG1578 Uncharacterized conserved protein [Function unknown]
Probab=33.02 E-value=1.9e+02 Score=26.81 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhc
Q 037640 342 RDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQE 379 (398)
Q Consensus 342 ~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~ 379 (398)
...+.+.+.+++.|++-.+.|++++.+++.+....+++
T Consensus 54 ~t~ihr~v~k~~g~eDPyke~K~r~NeiA~~vl~~vr~ 91 (285)
T COG1578 54 GTLIHREVYKILGNEDPYKEYKRRANEIALKVLPKVRE 91 (285)
T ss_pred HHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 35688888999999999999999999999888777666
No 218
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=32.95 E-value=50 Score=29.37 Aligned_cols=40 Identities=20% Similarity=0.353 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc---cHHHHHHH----cCCCeEEE
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP---YTAQIAGK----FNVPRIAF 59 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~---~~~~vA~~----lgIP~v~~ 59 (398)
+.+.+.++++...||+||+|-... -.+.+|-. +++|+|..
T Consensus 81 p~l~~~~~~l~~~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGV 127 (208)
T cd06559 81 PPLLEALEKLKTKPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGV 127 (208)
T ss_pred HHHHHHHHhCCCCCCEEEEeCCccccCCCcchhheeeeecCCCEEEE
Confidence 446677777656899999998653 23444544 46888865
No 219
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=32.68 E-value=97 Score=27.03 Aligned_cols=40 Identities=13% Similarity=0.062 Sum_probs=28.7
Q ss_pred chHHHHHHHhhcCCCCcEEEECCC--cccHHHHHHHcCCCeEEE
Q 037640 18 LLEPVENLFGQLKPQPNCIISDVC--LPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 18 ~~~~l~~~L~~~~~~~D~VI~D~~--~~~~~~vA~~lgIP~v~~ 59 (398)
....+.+.+++ .++|+|+.=.. .+.|..+|..+|+|++..
T Consensus 38 i~~~la~~~~~--~~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~v 79 (189)
T PRK09219 38 IGKEFARRFKD--EGITKILTIEASGIAPAVMAALALGVPVVFA 79 (189)
T ss_pred HHHHHHHHhcc--CCCCEEEEEccccHHHHHHHHHHHCCCEEEE
Confidence 34444455555 68999986443 368888999999999975
No 220
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=32.17 E-value=77 Score=31.56 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=29.9
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
...+.+++++ .++|++|.+.. +..+|+++|||++..
T Consensus 361 ~~e~~~~l~~--~~~dliiG~s~---~~~~a~~~~ip~~~~ 396 (429)
T cd03466 361 FFDIESYAKE--LKIDVLIGNSY---GRRIAEKLGIPLIRI 396 (429)
T ss_pred HHHHHHHHHh--cCCCEEEECch---hHHHHHHcCCCEEEe
Confidence 3677888888 89999998864 678999999999864
No 221
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.11 E-value=38 Score=28.57 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=29.7
Q ss_pred HHHHHHHhhc-----CCCCcEEEECCCc----------ccHHHHHHHcCCCeEEEech
Q 037640 20 EPVENLFGQL-----KPQPNCIISDVCL----------PYTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~-----~~~~D~VI~D~~~----------~~~~~vA~~lgIP~v~~~~~ 62 (398)
-.++++|..+ +++||+|++---. --+..+|+++|||++-.+..
T Consensus 107 LnvrnWlSQL~~hAYcE~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETSA~ 164 (219)
T KOG0081|consen 107 LNVRNWLSQLQTHAYCENPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETSAC 164 (219)
T ss_pred HHHHHHHHHHHHhhccCCCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeeccc
Confidence 3556666654 6899999874322 13677899999999965443
No 222
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=32.01 E-value=71 Score=32.64 Aligned_cols=35 Identities=11% Similarity=0.286 Sum_probs=29.1
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
..+.+.+++ .+||+||.+. ....+|+++|||++.+
T Consensus 354 ~ei~~~i~~--~~pdliiG~~---~er~~a~~lgip~~~i 388 (511)
T TIGR01278 354 QEVADAIAA--LEPELVLGTQ---MERHSAKRLDIPCGVI 388 (511)
T ss_pred HHHHHHHHh--cCCCEEEECh---HHHHHHHHcCCCEEEe
Confidence 477777777 8999999886 5677899999999875
No 223
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=31.88 E-value=4.4e+02 Score=24.73 Aligned_cols=103 Identities=13% Similarity=0.109 Sum_probs=63.3
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhC
Q 037640 214 ELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAG 293 (398)
Q Consensus 214 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~G 293 (398)
++++.++..+..++...+...- +++.|...... .-+-=||++ .=...|.+....|+..|
T Consensus 160 ~~~~~l~~~~~Dlivlagym~i--------l~~~~l~~~~~-----------~iiNiHpSl--LP~f~G~~~~~~ai~~G 218 (289)
T PRK13010 160 QILDLIETSGAELVVLARYMQV--------LSDDLSRKLSG-----------RAINIHHSF--LPGFKGARPYHQAHARG 218 (289)
T ss_pred HHHHHHHHhCCCEEEEehhhhh--------CCHHHHhhccC-----------CceeeCccc--CCCCCCCCHHHHHHHcC
Confidence 4666666666677776665432 55555433222 222336776 67778999999999999
Q ss_pred CCEeeccccc--chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhc
Q 037640 294 LPLLTWPLFA--DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMD 354 (398)
Q Consensus 294 vP~l~~P~~~--DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 354 (398)
+...++-.+. +..+....+. .--+.+..+ -+.++|.+.+.++-.
T Consensus 219 ~k~tG~TvH~v~~~lD~GpII~---Q~~v~V~~~--------------dt~e~L~~r~~~~E~ 264 (289)
T PRK13010 219 VKLIGATAHFVTDDLDEGPIIE---QDVERVDHS--------------YSPEDLVAKGRDVEC 264 (289)
T ss_pred CCeEEEEEEEEcCCCCCCCceE---EEEEEcCCC--------------CCHHHHHHHHHHHHH
Confidence 9999987653 4444444442 222333332 477888888877543
No 224
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=31.44 E-value=98 Score=30.58 Aligned_cols=43 Identities=7% Similarity=0.169 Sum_probs=31.6
Q ss_pred HHhchHHHHHHHhhcCCCCcEEEECCCccc-------H---HHHHHHcCCCeEEE
Q 037640 15 ADKLLEPVENLFGQLKPQPNCIISDVCLPY-------T---AQIAGKFNVPRIAF 59 (398)
Q Consensus 15 ~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~-------~---~~vA~~lgIP~v~~ 59 (398)
.+.....+.++++. .+||++|+=+.+-+ + ..+.++++||.+.-
T Consensus 61 ~eea~~~i~~mv~k--~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vta 113 (431)
T TIGR01917 61 LEEAKAKVLEMIKG--ANPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTA 113 (431)
T ss_pred HHHHHHHHHHHHHh--cCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 45556777888888 89999999986532 2 23457799999964
No 225
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=31.42 E-value=99 Score=30.55 Aligned_cols=43 Identities=16% Similarity=0.330 Sum_probs=31.6
Q ss_pred HHhchHHHHHHHhhcCCCCcEEEECCCccc-------H---HHHHHHcCCCeEEE
Q 037640 15 ADKLLEPVENLFGQLKPQPNCIISDVCLPY-------T---AQIAGKFNVPRIAF 59 (398)
Q Consensus 15 ~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~-------~---~~vA~~lgIP~v~~ 59 (398)
.+.....+.++++. .+||++|+=+.+-+ + ..+.++++||.+.-
T Consensus 61 ~eea~~~i~~mv~k--~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~ 113 (431)
T TIGR01918 61 LEEAVARVLEMLKD--KEPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTS 113 (431)
T ss_pred HHHHHHHHHHHHHh--cCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 44556777788888 89999999986632 2 23457799999964
No 226
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=31.26 E-value=3.8e+02 Score=24.77 Aligned_cols=99 Identities=12% Similarity=0.177 Sum_probs=49.9
Q ss_pred CceEEEeeCCcccCCHHHHHHH---HHHHHh-CCCCEEEEEeCC-CCchhhhhccCchhHHHHhcCCCeEEeecCchh--
Q 037640 194 KSVVYACLGSMCNLIPSQMMEL---GLGLEA-SNRPFIWVIREG-ETSKELKKWVVEDGFEERIKGRGLVIWDWAPQV-- 266 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~~~~~~~~~---~~al~~-~~~~~i~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~-- 266 (398)
++.|.|++-.....+.+....+ ++.+.+ .+.++++..-.. .+.. .-+.+.++......++...-|+.
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~------~~~~l~~~~~~~~~i~~~~~~~e~~ 245 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLP------LARALRDQLLGPAEVLSPLDPEELL 245 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHH------HHHHHHHhcCCCcEEEecCCHHHHH
Confidence 3467787755333344333333 344433 478887654321 1110 12223333322222332223333
Q ss_pred hhhcCCCcceeeecCCchhHHHHHHhCCCEeeccc
Q 037640 267 LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPL 301 (398)
Q Consensus 267 ~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~ 301 (398)
.+++++++ +|+.==+ ++.-|+.+|+|.+++.+
T Consensus 246 ~~i~~~~~--vI~~RlH-~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 246 GLFASARL--VIGMRLH-ALILAAAAGVPFVALSY 277 (298)
T ss_pred HHHhhCCE--EEEechH-HHHHHHHcCCCEEEeec
Confidence 46767776 8874333 35567889999999853
No 227
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=31.14 E-value=2.2e+02 Score=26.81 Aligned_cols=33 Identities=6% Similarity=0.162 Sum_probs=26.6
Q ss_pred hhhcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 267 LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 267 ~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
.++..-+-.++|++++..+..-|-..|+|.+.+
T Consensus 87 ~~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 87 NIIREYNPDLIISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred HHHHhcCCCEEEECCchHHHHHHHhcCCCEEEE
Confidence 344444445599999999999999999999966
No 228
>KOG1344 consensus Predicted histone deacetylase [Chromatin structure and dynamics]
Probab=30.80 E-value=1.5e+02 Score=26.73 Aligned_cols=46 Identities=9% Similarity=0.162 Sum_probs=32.1
Q ss_pred HHhchHHHHHHHhhcCCCCcEEEECCCcc----------------------cHHHHHHHcCCCeEEEech
Q 037640 15 ADKLLEPVENLFGQLKPQPNCIISDVCLP----------------------YTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 15 ~~~~~~~l~~~L~~~~~~~D~VI~D~~~~----------------------~~~~vA~~lgIP~v~~~~~ 62 (398)
+++..+.+.+.+++ .+||+||+..-.- -.+..++.+|||.+.+.+.
T Consensus 233 Lrkl~r~l~~sl~e--f~Pd~VvYNAGTDiLeGDpLG~L~ISp~Gi~~RDelVFr~~R~~~iPvvMltSG 300 (324)
T KOG1344|consen 233 LRKLKRCLMQSLAE--FRPDMVVYNAGTDILEGDPLGNLAISPEGIIERDELVFRTFRALGIPVVMLTSG 300 (324)
T ss_pred HHHHHHHHHHHHHh--hCCcEEEEeCCCccccCCCCCCeeecccccchhhHHHHHHHHHcCCcEEEEecC
Confidence 45667788888889 9999999865321 0234577788888876543
No 229
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=30.72 E-value=77 Score=20.43 Aligned_cols=26 Identities=19% Similarity=0.296 Sum_probs=17.5
Q ss_pred cHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 341 KRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 341 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
++++|..||..+.++. .++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~---~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK---MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS---S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC---CCHHHHHHHH
Confidence 4789999999888641 3777666654
No 230
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=30.62 E-value=80 Score=31.37 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=29.2
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
..++.+.+++ .+||+||.+.. ...+|+++|||++.+
T Consensus 360 ~~el~~~i~~--~~pdliig~~~---~~~~a~~~~ip~i~~ 395 (428)
T cd01965 360 LWDLESLAKE--EPVDLLIGNSH---GRYLARDLGIPLVRV 395 (428)
T ss_pred HHHHHHHhhc--cCCCEEEECch---hHHHHHhcCCCEEEe
Confidence 3567777777 79999999864 567899999999864
No 231
>PRK06270 homoserine dehydrogenase; Provisional
Probab=30.54 E-value=3.9e+02 Score=25.64 Aligned_cols=58 Identities=10% Similarity=0.075 Sum_probs=36.1
Q ss_pred chhhhhcCCCcceeee------cCC---chhHHHHHHhCCCEee---cccccchhhhHHHHHHHhcceEEe
Q 037640 264 PQVLILSHPSVGGFLT------HCG---WNSTLEGVCAGLPLLT---WPLFADQFTNEKLAVHLLKIGVKI 322 (398)
Q Consensus 264 pq~~~L~~~~~~~~it------hgG---~~s~~eal~~GvP~l~---~P~~~DQ~~na~~v~~~~g~g~~l 322 (398)
+-.++|.++...++|- |+| ..-+.+|+.+|+++|+ -|+...- .-...++++.|+....
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~-~eL~~~A~~~g~~~~~ 149 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAY-KELKELAKKNGVRFRY 149 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhH-HHHHHHHHHcCCEEEE
Confidence 4556777666665665 443 4456899999999999 4765422 2233333566666554
No 232
>TIGR02418 acolac_catab acetolactate synthase, catabolic. Acetolactate synthase (EC 2.2.1.6) combines two molecules of pyruvate to yield 2-acetolactate with the release of CO2. This reaction may be involved in either valine biosynthesis (biosynthetic) or conversion of pyruvate to acetoin and possibly to 2,3-butanediol (catabolic). The biosynthetic type, described by TIGR00118, is also capable of forming acetohydroxybutyrate from pyruvate and 2-oxobutyrate for isoleucine biosynthesis. The family described here, part of the same larger family of thiamine pyrophosphate-dependent enzymes (pfam00205, pfam02776) is the catabolic form, generally found associated with in species with acetolactate decarboxylase and usually found in the same operon. The model may not encompass all catabolic acetolactate synthases, but rather one particular clade in the larger TPP-dependent enzyme family.
Probab=30.38 E-value=1.3e+02 Score=30.82 Aligned_cols=28 Identities=18% Similarity=0.178 Sum_probs=23.0
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++.+|...++|||++-
T Consensus 61 ~~gv~~~t~GpG~~n~l~gl~~A~~~~~Pvl~I~ 94 (539)
T TIGR02418 61 KPGVALVTSGPGCSNLVTGLATANSEGDPVVAIG 94 (539)
T ss_pred CceEEEECCCCCHhHHHHHHHHHhhcCCCEEEEe
Confidence 3455888888 458999999999999994
No 233
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=30.37 E-value=82 Score=32.27 Aligned_cols=35 Identities=14% Similarity=0.321 Sum_probs=28.8
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
..+.+.+++ .+||+||.+. ....+|+++|||++.+
T Consensus 352 ~el~~~i~~--~~PdliiG~~---~er~~a~~lgiP~~~i 386 (519)
T PRK02910 352 LEVEDAIAE--AAPELVLGTQ---MERHSAKRLGIPCAVI 386 (519)
T ss_pred HHHHHHHHh--cCCCEEEEcc---hHHHHHHHcCCCEEEe
Confidence 467777777 8999999875 4667899999999875
No 234
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated
Probab=30.32 E-value=1.5e+02 Score=30.79 Aligned_cols=28 Identities=21% Similarity=0.310 Sum_probs=23.0
Q ss_pred CcceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.|- +++++|...++|||++-
T Consensus 67 ~~gv~~~t~GPG~~n~l~gi~~A~~~~~Pvl~i~ 100 (574)
T PRK07979 67 EVGVVLVTSGPGATNAITGIATAYMDSIPLVVLS 100 (574)
T ss_pred CceEEEECCCccHhhhHHHHHHHhhcCCCEEEEE
Confidence 45568888884 47899999999999984
No 235
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.15 E-value=1.6e+02 Score=26.96 Aligned_cols=43 Identities=9% Similarity=0.108 Sum_probs=34.2
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHcCCCeEEEechh
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKFNVPRIAFHGTC 63 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~lgIP~v~~~~~~ 63 (398)
...+.+.+++ .+..||+++.... .+..+|+..|+|.+.+.+..
T Consensus 206 l~~l~~~ik~--~~v~~if~e~~~~~~~~~~la~~~g~~v~~ld~~~ 250 (266)
T cd01018 206 LKRLIDLAKE--KGVRVVFVQPQFSTKSAEAIAREIGAKVVTIDPLA 250 (266)
T ss_pred HHHHHHHHHH--cCCCEEEEcCCCCcHHHHHHHHHcCCeEEEeCCcH
Confidence 4456667777 8999999998764 67788999999998876654
No 236
>PF13326 PSII_Pbs27: Photosystem II Pbs27; PDB: 2KND_A 2KMF_A 2Y6X_A.
Probab=30.14 E-value=1.7e+02 Score=24.33 Aligned_cols=57 Identities=14% Similarity=0.197 Sum_probs=40.4
Q ss_pred cHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHh--------cCCchHHHHHHHHHHHHcC
Q 037640 341 KRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQ--------EGGSSHLNITLLLQDIMKH 397 (398)
Q Consensus 341 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~ 397 (398)
+.-++.+.|++.++.+......++.+...++.+++.+. .|-.|..++..-||.|.+|
T Consensus 52 dt~~vv~~lr~~l~l~~d~~~~~~~~~~ar~~in~~vs~YRr~~~v~g~~Sf~~m~tAln~Lagh 116 (145)
T PF13326_consen 52 DTRAVVKTLREALELDKDDPNRAEAAAEARELINDYVSRYRRGPSVSGLPSFTTMYTALNALAGH 116 (145)
T ss_dssp HHHHHHHHHHHHHCS-TT-TTHHHHHHHHHHHHHHHHCCCCCCHHCCTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHhCCCCCcCCcchHHHHHHHHHHHHHH
Confidence 34467777777776566666888888888888887663 2337788888888888765
No 237
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=30.09 E-value=91 Score=21.28 Aligned_cols=53 Identities=8% Similarity=0.223 Sum_probs=30.9
Q ss_pred cccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 037640 335 NIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQ 392 (398)
Q Consensus 335 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 392 (398)
++++.++.++|..+++.+.... .-...-..+...++. ....++..-++++|++
T Consensus 12 d~~G~i~~~el~~~~~~~~~~~----~~~~~~~~~~~~~~~-~D~d~dG~i~~~Ef~~ 64 (66)
T PF13499_consen 12 DGDGYISKEELRRALKHLGRDM----SDEESDEMIDQIFRE-FDTDGDGRISFDEFLN 64 (66)
T ss_dssp TSSSEEEHHHHHHHHHHTTSHS----THHHHHHHHHHHHHH-HTTTSSSSEEHHHHHH
T ss_pred CccCCCCHHHHHHHHHHhcccc----cHHHHHHHHHHHHHH-hCCCCcCCCcHHHHhc
Confidence 4567899999999999887532 111222233333443 3455555556666665
No 238
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=29.85 E-value=87 Score=32.08 Aligned_cols=37 Identities=22% Similarity=0.180 Sum_probs=29.7
Q ss_pred chHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 18 LLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 18 ~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
-..+++++|.+ .++|++|... .+..+|+++|||.+.+
T Consensus 425 Dl~~l~~~l~~--~~~DlliG~s---~~k~~a~~~giPlir~ 461 (515)
T TIGR01286 425 DLWHLRSLVFT--EPVDFLIGNS---YGKYIQRDTLVPLIRI 461 (515)
T ss_pred CHHHHHHHHhh--cCCCEEEECc---hHHHHHHHcCCCEEEe
Confidence 34567777777 8999999775 4678999999999864
No 239
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=29.71 E-value=98 Score=29.26 Aligned_cols=75 Identities=16% Similarity=0.123 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhH
Q 037640 207 LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNST 286 (398)
Q Consensus 207 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~ 286 (398)
.+.+...++.+|+.+.....||.+.+.... ..+.++++...+-.||+. ||=..-..++
T Consensus 50 ~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~lD~~~i~~~PK~--fiGySDiTaL 107 (308)
T cd07062 50 SPEERAEELMAAFADPSIKAIIPTIGGDDS--------------------NELLPYLDYELIKKNPKI--FIGYSDITAL 107 (308)
T ss_pred CHHHHHHHHHHHhcCCCCCEEEECCcccCH--------------------hhhhhhcCHHHHhhCCCE--EEeccHHHHH
Confidence 345667789999999999999998776421 123345555555566665 7766666666
Q ss_pred HHHHH--hCCCEeeccccc
Q 037640 287 LEGVC--AGLPLLTWPLFA 303 (398)
Q Consensus 287 ~eal~--~GvP~l~~P~~~ 303 (398)
+-+++ +|.+.+.-|...
T Consensus 108 ~~al~~~~g~~t~hGp~~~ 126 (308)
T cd07062 108 HLAIYKKTGLVTYYGPNLL 126 (308)
T ss_pred HHHHHHhcCCeEEECcccc
Confidence 66663 366666666543
No 240
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=29.60 E-value=1.5e+02 Score=30.57 Aligned_cols=28 Identities=14% Similarity=0.334 Sum_probs=22.9
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .++++||...++|||++-
T Consensus 63 ~~gv~~~t~GpG~~n~~~~l~~A~~~~~Pvl~i~ 96 (548)
T PRK08978 63 KVGVCIATSGPGATNLITGLADALLDSVPVVAIT 96 (548)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3444888888 458999999999999984
No 241
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated
Probab=29.09 E-value=1.8e+02 Score=30.27 Aligned_cols=28 Identities=18% Similarity=0.307 Sum_probs=23.1
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++++|...++|||++-
T Consensus 74 ~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~i~ 107 (595)
T PRK09107 74 KPGVVLVTSGPGATNAVTPLQDALMDSIPLVCIT 107 (595)
T ss_pred CCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEE
Confidence 4555899988 458999999999999985
No 242
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=29.02 E-value=69 Score=31.81 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=29.8
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
..++.+.+++ .+||++|.... ...+|+++|||++.+
T Consensus 358 ~~e~~~~i~~--~~pDliig~~~---~~~~a~k~giP~~~~ 393 (421)
T cd01976 358 HYELEEFVKR--LKPDLIGSGIK---EKYVFQKMGIPFRQM 393 (421)
T ss_pred HHHHHHHHHH--hCCCEEEecCc---chhhhhhcCCCeEeC
Confidence 4577788888 89999998875 667899999999865
No 243
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=28.83 E-value=80 Score=31.50 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=29.0
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
..+.+.+++ .++|++|... .+..+|+++|||++-+
T Consensus 363 ~~l~~~i~~--~~~dliig~s---~~k~~A~~l~ip~ir~ 397 (432)
T TIGR01285 363 EDLEDLACA--AGADLLITNS---HGRALAQRLALPLVRA 397 (432)
T ss_pred HHHHHHHhh--cCCCEEEECc---chHHHHHHcCCCEEEe
Confidence 567788888 8999999775 4678999999999864
No 244
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated
Probab=28.77 E-value=1.6e+02 Score=30.54 Aligned_cols=28 Identities=18% Similarity=0.294 Sum_probs=23.0
Q ss_pred CcceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.|- +++++|...++|||++-
T Consensus 67 ~~gv~~~t~GpG~~n~l~gia~A~~~~~Pvl~i~ 100 (572)
T PRK08979 67 KVGVVLVTSGPGATNTITGIATAYMDSIPMVVLS 100 (572)
T ss_pred CCeEEEECCCchHhHHHHHHHHHhhcCCCEEEEe
Confidence 45558888884 48899999999999985
No 245
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated
Probab=28.68 E-value=1.5e+02 Score=30.79 Aligned_cols=28 Identities=18% Similarity=0.300 Sum_probs=22.7
Q ss_pred CcceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.|- +++++|...++|||++-
T Consensus 77 ~~gv~~~t~GpG~~N~~~gla~A~~~~~Pvl~I~ 110 (570)
T PRK06725 77 KVGVVFATSGPGATNLVTGLADAYMDSIPLVVIT 110 (570)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCcCEEEEe
Confidence 45558888884 47899999999999984
No 246
>PRK06457 pyruvate dehydrogenase; Provisional
Probab=28.46 E-value=1.6e+02 Score=30.25 Aligned_cols=28 Identities=11% Similarity=0.223 Sum_probs=23.1
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++.||...++|||++-
T Consensus 64 kpgv~~~t~GPG~~N~l~~l~~A~~~~~Pvl~i~ 97 (549)
T PRK06457 64 KPSACMGTSGPGSIHLLNGLYDAKMDHAPVIALT 97 (549)
T ss_pred CCeEEEeCCCCchhhhHHHHHHHHhcCCCEEEEe
Confidence 3455899988 458999999999999984
No 247
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=28.25 E-value=1.6e+02 Score=30.48 Aligned_cols=28 Identities=21% Similarity=0.310 Sum_probs=22.8
Q ss_pred CcceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.|- +++.+|...++|+|++.
T Consensus 67 ~~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 67 KVGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 45558888884 47899999999999984
No 248
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=28.08 E-value=1.3e+02 Score=23.98 Aligned_cols=37 Identities=14% Similarity=0.196 Sum_probs=27.1
Q ss_pred HHHHHHhhcCCCCcEEEECCCccc---HHHHHHHcC-CCeEEE
Q 037640 21 PVENLFGQLKPQPNCIISDVCLPY---TAQIAGKFN-VPRIAF 59 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~~---~~~vA~~lg-IP~v~~ 59 (398)
.+...+++ .+||+|.+....++ +..++...+ +|.|..
T Consensus 65 ~l~k~ik~--~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 65 RLRKIIKK--EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred HHHHHhcc--CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 67888888 89999987765542 334567778 888854
No 249
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=27.80 E-value=1.8e+02 Score=29.99 Aligned_cols=28 Identities=18% Similarity=0.370 Sum_probs=23.1
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .++++||...++|+|++-
T Consensus 64 ~~gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 64 KVGVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3455888888 458999999999999984
No 250
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=27.75 E-value=3.8e+02 Score=23.52 Aligned_cols=59 Identities=20% Similarity=0.120 Sum_probs=35.0
Q ss_pred cCcEEEEcChhhcc-HHHHHHHHhhcC-CceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCC
Q 037640 126 AIDGVIINSFEELE-PAYVKEYKKISR-DKAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGS 203 (398)
Q Consensus 126 ~~~~~li~s~~~le-~~~~~~~~~~~~-~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs 203 (398)
.++.+-+.-...+- +.|+..++.++| -++..+|++. .+.+.+|++.. .+.+..||
T Consensus 121 G~~~vK~FPA~~~GG~~~ik~l~~p~p~~~~~ptGGV~-------------------~~N~~~~l~ag----~~~vg~Gs 177 (196)
T PF01081_consen 121 GADIVKLFPAGALGGPSYIKALRGPFPDLPFMPTGGVN-------------------PDNLAEYLKAG----AVAVGGGS 177 (196)
T ss_dssp T-SEEEETTTTTTTHHHHHHHHHTTTTT-EEEEBSS---------------------TTTHHHHHTST----TBSEEEES
T ss_pred CCCEEEEecchhcCcHHHHHHHhccCCCCeEEEcCCCC-------------------HHHHHHHHhCC----CEEEEECc
Confidence 33444443333455 677777777775 3566677764 35688899764 46778888
Q ss_pred cccC
Q 037640 204 MCNL 207 (398)
Q Consensus 204 ~~~~ 207 (398)
....
T Consensus 178 ~L~~ 181 (196)
T PF01081_consen 178 WLFP 181 (196)
T ss_dssp GGGS
T ss_pred hhcC
Confidence 7663
No 251
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=27.73 E-value=5.1e+02 Score=24.21 Aligned_cols=102 Identities=12% Similarity=0.076 Sum_probs=61.1
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhC
Q 037640 214 ELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAG 293 (398)
Q Consensus 214 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~G 293 (398)
.+++.++..+..++...+...- +++.+.+.... .-+-=||++ .=.+.|.+.+..|+..|
T Consensus 156 ~~~~~l~~~~~Dlivlagy~~i--------l~~~~l~~~~~-----------~iiNiHpSL--LP~~rG~~~~~~ai~~G 214 (286)
T PRK13011 156 QVLDVVEESGAELVVLARYMQV--------LSPELCRKLAG-----------RAINIHHSF--LPGFKGAKPYHQAYERG 214 (286)
T ss_pred HHHHHHHHhCcCEEEEeChhhh--------CCHHHHhhccC-----------CeEEecccc--CCCCCCCcHHHHHHHCC
Confidence 3555566556666666655431 55555443222 222336777 77788999999999999
Q ss_pred CCEeeccccc--chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHh
Q 037640 294 LPLLTWPLFA--DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLM 353 (398)
Q Consensus 294 vP~l~~P~~~--DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl 353 (398)
+...++-.+. +..+-...+. ...+.+..+ -|.++|.+.+.++-
T Consensus 215 ~~~tG~TvH~v~~~~D~G~Ii~---Q~~v~I~~~--------------dt~~~L~~r~~~~E 259 (286)
T PRK13011 215 VKLIGATAHYVTDDLDEGPIIE---QDVERVDHA--------------YSPEDLVAKGRDVE 259 (286)
T ss_pred CCeEEEEEEEEcCCCcCCCcEE---EEEEEcCCC--------------CCHHHHHHHHHHHH
Confidence 9998887652 3333333331 222333332 48888998887743
No 252
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=27.32 E-value=2.6e+02 Score=20.79 Aligned_cols=37 Identities=11% Similarity=0.096 Sum_probs=25.1
Q ss_pred eEEEeeCCccc-CCHHHHHHHHHHHHh-C-CCCEEEEEeC
Q 037640 196 VVYACLGSMCN-LIPSQMMELGLGLEA-S-NRPFIWVIRE 232 (398)
Q Consensus 196 vv~vs~Gs~~~-~~~~~~~~~~~al~~-~-~~~~i~~~~~ 232 (398)
+|+++.||... .....+..+++.+++ . ...+.+.+..
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~~a~~~ 41 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYYVGFQS 41 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEEEEEEC
Confidence 78999999876 445566778888865 3 3555555443
No 253
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=27.23 E-value=1.5e+02 Score=25.60 Aligned_cols=37 Identities=16% Similarity=0.295 Sum_probs=28.7
Q ss_pred HHHHHHhhcCCCCcEEEECCC--cccHHHHHHHcCCCeEEE
Q 037640 21 PVENLFGQLKPQPNCIISDVC--LPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~--~~~~~~vA~~lgIP~v~~ 59 (398)
.+.+.+++ .++|.|++=.. .+.|..+|.++|+|+|..
T Consensus 44 ~~~~~~~~--~~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~v 82 (179)
T COG0503 44 ELAERYKD--DGIDKIVTIEARGIPLAAAVALELGVPFVPV 82 (179)
T ss_pred HHHHHhcc--cCCCEEEEEccccchhHHHHHHHhCCCEEEE
Confidence 56666666 78999987553 367888999999999964
No 254
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=27.03 E-value=1.8e+02 Score=30.16 Aligned_cols=28 Identities=11% Similarity=0.086 Sum_probs=23.0
Q ss_pred CcceeeecCCch------hHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGWN------STLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~~------s~~eal~~GvP~l~~P 300 (398)
+.+++++|.|-| ++++|...++|+|++.
T Consensus 64 ~~gv~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 64 RMSMVIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CCEEEEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 455588998843 8889999999999995
No 255
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=26.39 E-value=3.1e+02 Score=23.94 Aligned_cols=25 Identities=12% Similarity=0.029 Sum_probs=18.3
Q ss_pred ecccccchhhhHHHHHHHhcceEEe
Q 037640 298 TWPLFADQFTNEKLAVHLLKIGVKI 322 (398)
Q Consensus 298 ~~P~~~DQ~~na~~v~~~~g~g~~l 322 (398)
+.|...||..--..+-|...+|..-
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW 46 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSW 46 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccH
Confidence 4566788888877666788888765
No 256
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated
Probab=26.34 E-value=1.9e+02 Score=30.04 Aligned_cols=28 Identities=14% Similarity=0.292 Sum_probs=23.1
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++.+|...++|||++-
T Consensus 67 ~~gv~~vt~GPG~~N~l~gl~~A~~~~~Pvl~i~ 100 (574)
T PRK06466 67 KTGVVLVTSGPGATNAITGIATAYMDSIPMVVLS 100 (574)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 3455899888 458999999999999984
No 257
>PRK00039 ruvC Holliday junction resolvase; Reviewed
Probab=26.15 E-value=1.8e+02 Score=24.71 Aligned_cols=49 Identities=10% Similarity=0.151 Sum_probs=34.0
Q ss_pred HHHHHhchHHHHHHHhhcCCCCcEEEECCCccc---------------HHHHHHHcCCCeEEEech
Q 037640 12 FTAADKLLEPVENLFGQLKPQPNCIISDVCLPY---------------TAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 12 ~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~---------------~~~vA~~lgIP~v~~~~~ 62 (398)
.+.+..+...+.++|++ .+||.++.+..+.. ...++...|||..-+.|.
T Consensus 43 ~~Rl~~I~~~l~~~i~~--~~Pd~vaiE~~f~~~n~~sa~~l~~arGvi~la~~~~~ipv~ey~P~ 106 (164)
T PRK00039 43 PERLKQIYDGLSELIDE--YQPDEVAIEEVFFNKNPQSALKLGQARGVAILAAAQRGLPVAEYTPL 106 (164)
T ss_pred HHHHHHHHHHHHHHHHH--hCCCEEEEehhhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 34566677889999998 89999988875432 122456667887776554
No 258
>PRK07282 acetolactate synthase catalytic subunit; Reviewed
Probab=26.10 E-value=2e+02 Score=29.73 Aligned_cols=28 Identities=18% Similarity=0.374 Sum_probs=22.9
Q ss_pred CcceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.|- +++.+|.+.++|||++-
T Consensus 73 ~~gv~~~t~GPG~~n~~~gla~A~~~~~Pvl~i~ 106 (566)
T PRK07282 73 KLGVAVVTSGPGATNAITGIADAMSDSVPLLVFT 106 (566)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 35558889884 47899999999999995
No 259
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=25.82 E-value=1.2e+02 Score=30.25 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=28.9
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
...+.+.+++ .++|++|... ++..+|+++|||++.+
T Consensus 366 ~~e~~~~i~~--~~pDliiG~s---~~~~~a~~~gip~v~~ 401 (435)
T cd01974 366 LWHLRSLLFT--EPVDLLIGNT---YGKYIARDTDIPLVRF 401 (435)
T ss_pred HHHHHHHHhh--cCCCEEEECc---cHHHHHHHhCCCEEEe
Confidence 4566777777 7999999875 4678999999999865
No 260
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=25.81 E-value=1.4e+02 Score=24.85 Aligned_cols=42 Identities=12% Similarity=0.131 Sum_probs=28.7
Q ss_pred HHHHHHhhcCCCCcEEEECCCc---------ccHHHHHHHcCCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCL---------PYTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~---------~~~~~vA~~lgIP~v~~~~~ 62 (398)
.+.+.++++..++|+||.|... ....+++..++.|.+.....
T Consensus 88 ~i~~~~~~l~~~~D~viid~~g~~~~~~~~~~~~~dl~~~~~~~vilV~~~ 138 (166)
T TIGR00347 88 ELSKHLRTLEQKYDFVLVEGAGGLCVPITEEYTTADLIKLLQLPVILVVRV 138 (166)
T ss_pred HHHHHHHHHHhcCCEEEEEcCCccccCCCCCCcHHHHHHHhCCCEEEEECC
Confidence 3444444444689999988741 24566889999999877543
No 261
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=25.28 E-value=2e+02 Score=26.75 Aligned_cols=90 Identities=14% Similarity=0.101 Sum_probs=55.3
Q ss_pred hhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecC
Q 037640 184 CLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWA 263 (398)
Q Consensus 184 ~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 263 (398)
.-++|.+. +.++++.+|+... ....+...|.+.+.+++...+... .+
T Consensus 123 av~~L~~A--~rI~~~G~g~S~~----vA~~~~~~l~~ig~~~~~~~d~~~--------------------------~~- 169 (281)
T COG1737 123 AVELLAKA--RRIYFFGLGSSGL----VASDLAYKLMRIGLNVVALSDTHG--------------------------QL- 169 (281)
T ss_pred HHHHHHcC--CeEEEEEechhHH----HHHHHHHHHHHcCCceeEecchHH--------------------------HH-
Confidence 34445443 3377777776653 344566777777887766543210 12
Q ss_pred chhhhhcCCCcceeeecCCch-----hHHHHHHhCCCEeecccccchh
Q 037640 264 PQVLILSHPSVGGFLTHCGWN-----STLEGVCAGLPLLTWPLFADQF 306 (398)
Q Consensus 264 pq~~~L~~~~~~~~ithgG~~-----s~~eal~~GvP~l~~P~~~DQ~ 306 (398)
-+...+...++-++|+|.|.. .+..|-..|+|+|.+--..+-+
T Consensus 170 ~~~~~~~~~Dv~i~iS~sG~t~e~i~~a~~ak~~ga~vIaiT~~~~sp 217 (281)
T COG1737 170 MQLALLTPGDVVIAISFSGYTREIVEAAELAKERGAKVIAITDSADSP 217 (281)
T ss_pred HHHHhCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEcCCCCCc
Confidence 245556666777799999965 3445567899999995544433
No 262
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=24.77 E-value=94 Score=32.32 Aligned_cols=100 Identities=17% Similarity=0.176 Sum_probs=47.3
Q ss_pred chhhhhcCCCcceeeecCC-ch-hHHHHHHhCCCEeeccccc-chhhhHHHH-HHHhcceEEeccCCCCCcccccccccc
Q 037640 264 PQVLILSHPSVGGFLTHCG-WN-STLEGVCAGLPLLTWPLFA-DQFTNEKLA-VHLLKIGVKIGVENPMTWGEEQNIGVL 339 (398)
Q Consensus 264 pq~~~L~~~~~~~~ithgG-~~-s~~eal~~GvP~l~~P~~~-DQ~~na~~v-~~~~g~g~~l~~~~~~~~~~~~~~~~~ 339 (398)
+..+++.-+.+++|-|-== || |-+||+++|||.|.-=+.+ -++.+-..- .+..|+-+.-+.. .+-+
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~----------~n~~ 531 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRD----------KNYD 531 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSS----------S-HH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCC----------CCHH
Confidence 4556666667766666322 33 8899999999999876643 222221100 0234554433332 0111
Q ss_pred ccHHHHHHHHHHHhc-cCcchHHHHHHHHHHHHHH
Q 037640 340 VKRDDVKNAVERLMD-EGNDGEERRNRALNLAKMA 373 (398)
Q Consensus 340 ~~~~~l~~ai~~vl~-~~~~~~~~~~~a~~l~~~~ 373 (398)
-+.++|++.+.+... +..+....|++|++|++.+
T Consensus 532 e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 532 ESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 233445555544432 2334446666666666543
No 263
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=24.75 E-value=2.4e+02 Score=28.15 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=56.4
Q ss_pred hhcCCCcceeeecCCch--------------hHHHHHHhCCCEeec-----ccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 268 ILSHPSVGGFLTHCGWN--------------STLEGVCAGLPLLTW-----PLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 268 ~L~~~~~~~~ithgG~~--------------s~~eal~~GvP~l~~-----P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
|-.|+-++++||--|.- .+.|--.-|+|.|++ |...+-..-+..+.++.++-+..-.-
T Consensus 141 I~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpvnc--- 217 (492)
T PF09547_consen 141 ITDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPVNC--- 217 (492)
T ss_pred eccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEeeh---
Confidence 34699999999999843 567778899999886 55555555666776777877654321
Q ss_pred CccccccccccccHHHHHHHHHHHhcc
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVERLMDE 355 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~vl~~ 355 (398)
..++.++|.+.++++|.+
T Consensus 218 ---------~~l~~~DI~~Il~~vLyE 235 (492)
T PF09547_consen 218 ---------EQLREEDITRILEEVLYE 235 (492)
T ss_pred ---------HHcCHHHHHHHHHHHHhc
Confidence 258999999999998753
No 264
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=24.74 E-value=2.1e+02 Score=26.91 Aligned_cols=26 Identities=19% Similarity=0.079 Sum_probs=21.3
Q ss_pred ceeeecCCchhHHHHHHh----CCCEeecc
Q 037640 275 GGFLTHCGWNSTLEGVCA----GLPLLTWP 300 (398)
Q Consensus 275 ~~~ithgG~~s~~eal~~----GvP~l~~P 300 (398)
.++|+-||-||+++++.. ++|++++-
T Consensus 65 d~vi~~GGDGt~l~~~~~~~~~~~pilGIn 94 (291)
T PRK02155 65 DLAVVLGGDGTMLGIGRQLAPYGVPLIGIN 94 (291)
T ss_pred CEEEEECCcHHHHHHHHHhcCCCCCEEEEc
Confidence 349999999999999763 67888774
No 265
>PRK09259 putative oxalyl-CoA decarboxylase; Validated
Probab=24.65 E-value=1.8e+02 Score=30.14 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=22.7
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++++|...++|||++-
T Consensus 72 ~~gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 105 (569)
T PRK09259 72 KPGVCLTVSAPGFLNGLTALANATTNCFPMIMIS 105 (569)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHHhcCCCEEEEE
Confidence 4455888877 458999999999999984
No 266
>PRK07064 hypothetical protein; Provisional
Probab=24.30 E-value=2.4e+02 Score=28.93 Aligned_cols=28 Identities=36% Similarity=0.487 Sum_probs=22.9
Q ss_pred CcceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.|- +++++|...++|+|++-
T Consensus 66 ~~~v~~~t~GpG~~N~~~~i~~A~~~~~Pvl~i~ 99 (544)
T PRK07064 66 GLGVALTSTGTGAGNAAGALVEALTAGTPLLHIT 99 (544)
T ss_pred CCeEEEeCCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34558899884 48999999999999984
No 267
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name.
Probab=24.07 E-value=2e+02 Score=29.86 Aligned_cols=28 Identities=18% Similarity=0.309 Sum_probs=23.2
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++++|...++|+|++.
T Consensus 63 k~gv~~~t~GPG~~n~~~~i~~A~~~~~Pvl~I~ 96 (575)
T TIGR02720 63 KIGVCFGSAGPGATHLLNGLYDAKEDHVPVLALV 96 (575)
T ss_pred CceEEEeCCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 4455888888 458999999999999994
No 268
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=23.98 E-value=2.6e+02 Score=28.90 Aligned_cols=28 Identities=14% Similarity=0.285 Sum_probs=22.7
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++.+|.+.++|+|++-
T Consensus 70 ~~~v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 103 (561)
T PRK06048 70 KVGVCVATSGPGATNLVTGIATAYMDSVPIVALT 103 (561)
T ss_pred CCeEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3445888887 458999999999999984
No 269
>PLN02293 adenine phosphoribosyltransferase
Probab=23.94 E-value=1.9e+02 Score=25.10 Aligned_cols=42 Identities=5% Similarity=0.045 Sum_probs=28.7
Q ss_pred HhchHHHHHHHhhcCCCCcEEEECCC--cccHHHHHHHcCCCeEEE
Q 037640 16 DKLLEPVENLFGQLKPQPNCIISDVC--LPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 16 ~~~~~~l~~~L~~~~~~~D~VI~D~~--~~~~~~vA~~lgIP~v~~ 59 (398)
+.+.+.+.+.+++ .++|+|+.=.. .+.|..+|..+|+|++..
T Consensus 48 ~~~~~~l~~~~~~--~~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~ 91 (187)
T PLN02293 48 KDTIDLFVERYRD--MGISVVAGIEARGFIFGPPIALAIGAKFVPL 91 (187)
T ss_pred HHHHHHHHHHHhh--cCCCEEEEeCCCchHHHHHHHHHHCCCEEEE
Confidence 3445555556656 67898876432 347888999999998753
No 270
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=23.70 E-value=1.8e+02 Score=25.34 Aligned_cols=39 Identities=5% Similarity=0.028 Sum_probs=27.5
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCc--ccHHHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCL--PYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~--~~~~~vA~~lgIP~v~~ 59 (398)
...+.+.+++ .++|.|+.=..- +.|..+|..+|+|.+..
T Consensus 62 ~~~la~~~~~--~~~d~I~g~~~~GiplA~~vA~~l~~p~v~v 102 (187)
T PRK13810 62 ARQAALRIKE--MDVDTVAGVELGGVPLATAVSLETGLPLLIV 102 (187)
T ss_pred HHHHHHHhcc--CCCCEEEEEccchHHHHHHHHHHhCCCEEEE
Confidence 3344455555 689999875543 57788899999999864
No 271
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=23.69 E-value=1.6e+02 Score=27.25 Aligned_cols=29 Identities=17% Similarity=0.398 Sum_probs=22.6
Q ss_pred CCCcEEEECCC--cccHHHHHHHcCCCeEEE
Q 037640 31 PQPNCIISDVC--LPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 31 ~~~D~VI~D~~--~~~~~~vA~~lgIP~v~~ 59 (398)
.++|+|++=.. .+.|..+|..+|+|.+..
T Consensus 127 ~~iD~VvgvetkGIpLA~avA~~L~vp~viv 157 (268)
T TIGR01743 127 REIDAVMTVATKGIPLAYAVASVLNVPLVIV 157 (268)
T ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCEEEE
Confidence 67898886443 367888999999998875
No 272
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=23.34 E-value=1.3e+02 Score=29.81 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=25.2
Q ss_pred HHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 23 ENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 23 ~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
.+.+++ .++|++|.. ..+..+|+++|||.+.+
T Consensus 343 ~~~~~~--~~pDl~Ig~---s~~~~~a~~~giP~~r~ 374 (416)
T cd01980 343 IAAVEE--YRPDLAIGT---TPLVQYAKEKGIPALYY 374 (416)
T ss_pred HHHHhh--cCCCEEEeC---ChhhHHHHHhCCCEEEe
Confidence 344555 799999977 45777999999999875
No 273
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=23.24 E-value=55 Score=27.00 Aligned_cols=40 Identities=23% Similarity=0.341 Sum_probs=29.9
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHH-----hCCCCEEEEEeCCC
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLE-----ASNRPFIWVIREGE 234 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~-----~~~~~~i~~~~~~~ 234 (398)
.||+|+.|+........+..++.... .....|+|.++...
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~~ 47 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDAD 47 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-TT
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCchh
Confidence 38999999999877777777777776 23468999998764
No 274
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=23.18 E-value=1.8e+02 Score=25.41 Aligned_cols=40 Identities=15% Similarity=0.096 Sum_probs=27.6
Q ss_pred chHHHHHHHhhcCCCCcEEEECCC--cccHHHHHHHcCCCeEEE
Q 037640 18 LLEPVENLFGQLKPQPNCIISDVC--LPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 18 ~~~~l~~~L~~~~~~~D~VI~D~~--~~~~~~vA~~lgIP~v~~ 59 (398)
....+.+.+++ .++|+|++=.. .+.|..+|..+|+|++..
T Consensus 38 v~~~l~~~~~~--~~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~v 79 (191)
T TIGR01744 38 VGEEFARRFAD--DGITKIVTIEASGIAPAIMTGLKLGVPVVFA 79 (191)
T ss_pred HHHHHHHHhcc--CCCCEEEEEccccHHHHHHHHHHHCCCEEEE
Confidence 34444444555 68999985322 357888899999999975
No 275
>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase. In a number of bacteria, including Oxalobacter formigenes from the human gut, a two-gene operon of oxc (oxalyl-CoA decarboxylase) and frc (formyl-CoA transferase) encodes a system for degrading and therefore detoxifying oxalate. Members of this family are the thiamine pyrophosphate (TPP)-containing enzyme oxalyl-CoA decarboxylase.
Probab=22.95 E-value=2.2e+02 Score=29.30 Aligned_cols=28 Identities=14% Similarity=0.194 Sum_probs=22.6
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++++|...++|||++-
T Consensus 65 ~~gv~~~t~GPG~~N~~~gia~A~~~~~Pvl~I~ 98 (554)
T TIGR03254 65 KPGVCLTVSAPGFLNGLTALANATTNCFPMIMIS 98 (554)
T ss_pred CCEEEEEccCccHHhHHHHHHHHHhcCCCEEEEE
Confidence 3455888877 458899999999999985
No 276
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=22.84 E-value=96 Score=29.65 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=24.1
Q ss_pred CCCcEE-EECCCc-ccHHHHHHHcCCCeEEEech
Q 037640 31 PQPNCI-ISDVCL-PYTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 31 ~~~D~V-I~D~~~-~~~~~vA~~lgIP~v~~~~~ 62 (398)
..||+| |.|+.. ..+..=|.++|||+|.+.-+
T Consensus 151 ~~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivDT 184 (326)
T PRK12311 151 GLPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVDT 184 (326)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEeeC
Confidence 478877 456654 57788899999999987544
No 277
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=22.81 E-value=4.6e+02 Score=21.97 Aligned_cols=86 Identities=14% Similarity=0.189 Sum_probs=47.3
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcc
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVG 275 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~ 275 (398)
.|-|-+||.. +.+..+++...|++.+..+-..+-+... .|+.+.+ ++.. +.+...+
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~saHR--------~p~~l~~-----------~~~~---~~~~~~~ 57 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASAHR--------TPERLLE-----------FVKE---YEARGAD 57 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--TTT--------SHHHHHH-----------HHHH---TTTTTES
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC--------CHHHHHH-----------HHHH---hccCCCE
Confidence 3566677776 4567778888888888766555544332 3333221 1111 1222334
Q ss_pred eeeecCCch----hHHHHHHhCCCEeecccccchh
Q 037640 276 GFLTHCGWN----STLEGVCAGLPLLTWPLFADQF 306 (398)
Q Consensus 276 ~~ithgG~~----s~~eal~~GvP~l~~P~~~DQ~ 306 (398)
+||.=.|.. ++.-++ .-+|+|++|....+.
T Consensus 58 viIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~ 91 (150)
T PF00731_consen 58 VIIAVAGMSAALPGVVASL-TTLPVIGVPVSSGYL 91 (150)
T ss_dssp EEEEEEESS--HHHHHHHH-SSS-EEEEEE-STTT
T ss_pred EEEEECCCcccchhhheec-cCCCEEEeecCcccc
Confidence 488887765 333333 379999999887654
No 278
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=22.67 E-value=5.7e+02 Score=22.98 Aligned_cols=153 Identities=8% Similarity=-0.036 Sum_probs=73.0
Q ss_pred hhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecC
Q 037640 184 CLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWA 263 (398)
Q Consensus 184 ~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 263 (398)
++-|++.++ +.|++|..|.+.. .=+..|.+.+..+.+.... +.+.+..-.....+....--
T Consensus 17 ~pi~l~~~~-~~VLVVGGG~VA~-------RK~~~Ll~~gA~VtVVap~-----------i~~el~~l~~~~~i~~~~r~ 77 (223)
T PRK05562 17 MFISLLSNK-IKVLIIGGGKAAF-------IKGKTFLKKGCYVYILSKK-----------FSKEFLDLKKYGNLKLIKGN 77 (223)
T ss_pred eeeEEECCC-CEEEEECCCHHHH-------HHHHHHHhCCCEEEEEcCC-----------CCHHHHHHHhCCCEEEEeCC
Confidence 344555443 4477777666552 2234455567777766533 22223222223444433211
Q ss_pred chhhhhcCCCcceeeecCCchhHHHHHHh-----CCCEeecccccchhhhH-----HHHHHHhcceEEeccCCCCCcccc
Q 037640 264 PQVLILSHPSVGGFLTHCGWNSTLEGVCA-----GLPLLTWPLFADQFTNE-----KLAVHLLKIGVKIGVENPMTWGEE 333 (398)
Q Consensus 264 pq~~~L~~~~~~~~ithgG~~s~~eal~~-----GvP~l~~P~~~DQ~~na-----~~v~~~~g~g~~l~~~~~~~~~~~ 333 (398)
-+..-|..+.+ +|.-.+-..+.+.++. |+++.+. |++..+ ..+ ++-++-+.+...
T Consensus 78 ~~~~dl~g~~L--ViaATdD~~vN~~I~~~a~~~~~lvn~v----d~p~~~dFi~PAiv-~rg~l~IaIST~-------- 142 (223)
T PRK05562 78 YDKEFIKDKHL--IVIATDDEKLNNKIRKHCDRLYKLYIDC----SDYKKGLCIIPYQR-STKNFVFALNTK-------- 142 (223)
T ss_pred CChHHhCCCcE--EEECCCCHHHHHHHHHHHHHcCCeEEEc----CCcccCeEEeeeEE-ecCCEEEEEECC--------
Confidence 12223445554 7777776555554433 4554433 332222 112 121222222221
Q ss_pred ccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHH
Q 037640 334 QNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKM 375 (398)
Q Consensus 334 ~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 375 (398)
|..-.-...|++.|.+++. + ...+-+.+..+++.++.
T Consensus 143 --G~sP~lar~lR~~ie~~l~--~-~~~l~~~l~~~R~~vk~ 179 (223)
T PRK05562 143 --GGSPKTSVFIGEKVKNFLK--K-YDDFIEYVTKIRNKAKK 179 (223)
T ss_pred --CcCcHHHHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHh
Confidence 1112344668888888883 2 33666777777777654
No 279
>PRK09213 pur operon repressor; Provisional
Probab=22.61 E-value=1.8e+02 Score=27.11 Aligned_cols=29 Identities=17% Similarity=0.360 Sum_probs=21.4
Q ss_pred CCCcEEEECCC--cccHHHHHHHcCCCeEEE
Q 037640 31 PQPNCIISDVC--LPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 31 ~~~D~VI~D~~--~~~~~~vA~~lgIP~v~~ 59 (398)
.++|+|++=.. .+.|..+|..+|+|.+..
T Consensus 129 ~~iD~Vvtvet~GIplA~~vA~~L~vp~viv 159 (271)
T PRK09213 129 KKIDAVMTVETKGIPLAYAVANYLNVPFVIV 159 (271)
T ss_pred cCCCEEEEEccccHHHHHHHHHHHCCCEEEE
Confidence 57888876433 357888888899998865
No 280
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=22.15 E-value=2e+02 Score=27.96 Aligned_cols=98 Identities=17% Similarity=0.220 Sum_probs=58.0
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhH---HHHhcCC--CeEEeecCchhh---hhcCCCcceee
Q 037640 207 LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGF---EERIKGR--GLVIWDWAPQVL---ILSHPSVGGFL 278 (398)
Q Consensus 207 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~---~~~~~~~--~v~~~~~~pq~~---~L~~~~~~~~i 278 (398)
.....+..+++++++.+.++...+..+.....+..+ ++... ....... .+.+.++++|.+ +|-.+++ =+
T Consensus 190 Ye~~al~~ll~~~~~~~~pv~lLvp~Gr~~~~v~~~-l~~~~~~~g~~~~~g~L~~~~LPf~~Q~~yD~LLW~cD~--Nf 266 (371)
T TIGR03837 190 YENAALPALLDALAQSGSPVHLLVPEGRALAAVAAW-LGDALLAAGDVHRRGALTVAVLPFVPQDDYDRLLWACDL--NF 266 (371)
T ss_pred cCChhHHHHHHHHHhCCCCeEEEecCCccHHHHHHH-hCccccCCccccccCceEEEEcCCCChhhHHHHHHhChh--cE
Confidence 344567889999988888876666554322222222 21100 0111122 345668999874 7777776 22
Q ss_pred ecCCchhHHHHHHhCCCEeecccccchhhhHH
Q 037640 279 THCGWNSTLEGVCAGLPLLTWPLFADQFTNEK 310 (398)
Q Consensus 279 thgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 310 (398)
-. |--|...|..+|+|+|=-.+. |.++|.
T Consensus 267 VR-GEDSFVRAqWAgkPfvWhIYP--QeddaH 295 (371)
T TIGR03837 267 VR-GEDSFVRAQWAGKPFVWHIYP--QEEDAH 295 (371)
T ss_pred ee-chhHHHHHHHcCCCceeeccc--CchhhH
Confidence 23 667999999999999865544 444443
No 281
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated
Probab=22.11 E-value=2.7e+02 Score=28.95 Aligned_cols=28 Identities=18% Similarity=0.281 Sum_probs=23.0
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++.+|...++|||++.
T Consensus 84 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 117 (587)
T PRK06965 84 KVGVALVTSGPGVTNAVTGIATAYMDSIPMVVIS 117 (587)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3445888888 458899999999999996
No 282
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=22.10 E-value=1.2e+02 Score=25.91 Aligned_cols=29 Identities=14% Similarity=0.300 Sum_probs=21.3
Q ss_pred CCCcEEEECCCcccHHHHHHHcCCCeEEEech
Q 037640 31 PQPNCIISDVCLPYTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 31 ~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~ 62 (398)
.++|+||.+.. ...+|+++|+|++.+.++
T Consensus 124 ~G~~viVGg~~---~~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 124 EGVDVIVGGGV---VCRLARKLGLPGVLIESG 152 (176)
T ss_dssp TT--EEEESHH---HHHHHHHTTSEEEESS--
T ss_pred cCCcEEECCHH---HHHHHHHcCCcEEEEEec
Confidence 68999998853 578899999999987664
No 283
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=22.09 E-value=4.7e+02 Score=25.19 Aligned_cols=36 Identities=17% Similarity=0.223 Sum_probs=28.1
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCC
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREG 233 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 233 (398)
|+++++|+.+... -+..++++|.+.|+.|.+.....
T Consensus 3 Il~~~~p~~GHv~--P~l~la~~L~~rGh~V~~~t~~~ 38 (401)
T cd03784 3 VLITTIGSRGDVQ--PLVALAWALRAAGHEVRVATPPE 38 (401)
T ss_pred EEEEeCCCcchHH--HHHHHHHHHHHCCCeEEEeeCHh
Confidence 7888999877533 45678999999999999887653
No 284
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=22.06 E-value=7.6e+02 Score=24.23 Aligned_cols=164 Identities=18% Similarity=0.133 Sum_probs=81.1
Q ss_pred hhhhhhhhcCCCCCceEEEeeCC----cccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHh----
Q 037640 181 EHKCLKWLDSKDPKSVVYACLGS----MCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERI---- 252 (398)
Q Consensus 181 ~~~~~~~l~~~~~~~vv~vs~Gs----~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~---- 252 (398)
-+.+...|.+.++++||+.--=. ...++.++..++++.+++.+.=.+.=+.-.. +.+++++..
T Consensus 159 f~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQG---------F~~GleeDa~~lR 229 (396)
T COG1448 159 FDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQG---------FADGLEEDAYALR 229 (396)
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhh---------hccchHHHHHHHH
Confidence 45677777777777776653322 2226788888999999876653333221110 111111111
Q ss_pred ---c-CCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCC
Q 037640 253 ---K-GRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPM 328 (398)
Q Consensus 253 ---~-~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~ 328 (398)
. ..-+.+..-..-.-=|=..+++++.-.+=-..+..-+..-++.++--...--+...++++ +.
T Consensus 230 ~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vv-----a~-------- 296 (396)
T COG1448 230 LFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVV-----AT-------- 296 (396)
T ss_pred HHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHH-----HH--------
Confidence 1 122444433332222334566666666544444433333333333333333333333332 00
Q ss_pred CccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCc
Q 037640 329 TWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGS 382 (398)
Q Consensus 329 ~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~ 382 (398)
-++..+|++--.+-+ ..||+|..++++.+.+.+.+-|.
T Consensus 297 ----------IL~~p~Lra~W~~El------~~Mr~Ri~~mR~~lv~~L~~~~~ 334 (396)
T COG1448 297 ----------ILNNPELRAEWEQEL------EEMRQRILEMRQALVDALKALGA 334 (396)
T ss_pred ----------HhCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhhCC
Confidence 123334443333333 28899999999999888776443
No 285
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit. This model represents the alpha subunit, or the N-terminal region, of sulfopyruvate decarboxylase, an enzyme of coenzyme M biosynthesis. Coenzyme M is found almost exclusively in the methanogenic archaea. However, the enzyme also occurs in Roseovarius nubinhibens ISM in a degradative pathway, where the resulting sulfoacetaldehyde is desulfonated to acetyl phosphate, then converted to acetyl-CoA (see PubMed:19581363).
Probab=21.89 E-value=2.3e+02 Score=23.82 Aligned_cols=25 Identities=20% Similarity=0.230 Sum_probs=19.7
Q ss_pred eeeecCCc----hhHHHHH-HhCCCEeecc
Q 037640 276 GFLTHCGW----NSTLEGV-CAGLPLLTWP 300 (398)
Q Consensus 276 ~~ithgG~----~s~~eal-~~GvP~l~~P 300 (398)
++..+.|. |++++|. ..++|+|++=
T Consensus 62 v~~~~sG~gn~~~~l~~a~~~~~~Pvl~i~ 91 (157)
T TIGR03845 62 ILMQSSGLGNSINALASLNKTYGIPLPILA 91 (157)
T ss_pred EEEeCCcHHHHHHHHHHHHHcCCCCEEEEE
Confidence 47777774 5777888 9999999985
No 286
>PRK08266 hypothetical protein; Provisional
Probab=21.86 E-value=2.7e+02 Score=28.54 Aligned_cols=27 Identities=19% Similarity=0.089 Sum_probs=22.3
Q ss_pred cceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 274 VGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 274 ~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
.+++++|.|- +++.||...++|+|++-
T Consensus 69 ~~v~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 101 (542)
T PRK08266 69 PGVCSVVPGPGVLNAGAALLTAYGCNSPVLCLT 101 (542)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 4458888884 58999999999999984
No 287
>PRK07586 hypothetical protein; Validated
Probab=21.81 E-value=6.9e+02 Score=25.32 Aligned_cols=27 Identities=19% Similarity=0.129 Sum_probs=20.7
Q ss_pred cceeeecCCch------hHHHHHHhCCCEeecc
Q 037640 274 VGGFLTHCGWN------STLEGVCAGLPLLTWP 300 (398)
Q Consensus 274 ~~~~ithgG~~------s~~eal~~GvP~l~~P 300 (398)
.+++++|.|-| ++.+|.+.++|||++.
T Consensus 65 ~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~i~ 97 (514)
T PRK07586 65 PAATLLHLGPGLANGLANLHNARRARTPIVNIV 97 (514)
T ss_pred CEEEEecccHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 34477787744 6668999999999985
No 288
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=21.81 E-value=1.7e+02 Score=26.48 Aligned_cols=28 Identities=14% Similarity=0.328 Sum_probs=17.8
Q ss_pred CCCcEEEECCC--cccHHHHHHHcCCCeEE
Q 037640 31 PQPNCIISDVC--LPYTAQIAGKFNVPRIA 58 (398)
Q Consensus 31 ~~~D~VI~D~~--~~~~~~vA~~lgIP~v~ 58 (398)
.++|+|++=.. .+.|..+|..+|+|.+.
T Consensus 110 ~~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi 139 (238)
T PRK08558 110 LRVDVVLTAATDGIPLAVAIASYFGADLVY 139 (238)
T ss_pred CCCCEEEEECcccHHHHHHHHHHHCcCEEE
Confidence 46777765332 24667777777777775
No 289
>PRK14478 nitrogenase molybdenum-cofactor biosynthesis protein NifE; Provisional
Probab=21.72 E-value=1.1e+02 Score=30.85 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=28.1
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIA 58 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~ 58 (398)
...+.+.+++ .++|++|.. ..+..+|+++|||++.
T Consensus 382 ~~e~~~~i~~--~~pDliig~---s~~~~~a~k~giP~~~ 416 (475)
T PRK14478 382 PRELYKMLKE--AKADIMLSG---GRSQFIALKAGMPWLD 416 (475)
T ss_pred HHHHHHHHhh--cCCCEEEec---CchhhhhhhcCCCEEE
Confidence 3556667777 799999986 5677899999999983
No 290
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=21.57 E-value=1.6e+02 Score=22.17 Aligned_cols=54 Identities=9% Similarity=0.025 Sum_probs=34.8
Q ss_pred ccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHc
Q 037640 336 IGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMK 396 (398)
Q Consensus 336 ~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (398)
+++.++.++|+..+.+-+.+ .+. ....+.++++.. ..+|...-++++|+..+..
T Consensus 22 ~~g~i~~~ELk~ll~~elg~-----~ls-~~~~v~~mi~~~-D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 22 GKESLTASEFQELLTQQLPH-----LLK-DVEGLEEKMKNL-DVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred CCCeECHHHHHHHHHHHhhh-----hcc-CHHHHHHHHHHh-CCCCCCCCcHHHHHHHHHH
Confidence 45679999999999885532 122 115677777655 4456656677777766543
No 291
>PRK08617 acetolactate synthase; Reviewed
Probab=21.28 E-value=2.4e+02 Score=29.05 Aligned_cols=28 Identities=18% Similarity=0.261 Sum_probs=22.6
Q ss_pred CcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.| .+++.||...++|||++-
T Consensus 67 ~~gv~~vt~GpG~~N~l~gl~~A~~~~~Pvlvis 100 (552)
T PRK08617 67 KPGVVLVTSGPGVSNLATGLVTATAEGDPVVAIG 100 (552)
T ss_pred CCEEEEECCCCcHhHhHHHHHHHhhcCCCEEEEe
Confidence 3445888877 458999999999999984
No 292
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=21.20 E-value=2.7e+02 Score=24.47 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=53.6
Q ss_pred CHHHHH-HHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhH
Q 037640 208 IPSQMM-ELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNST 286 (398)
Q Consensus 208 ~~~~~~-~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~ 286 (398)
+.+.+. ++++.+...+..+|...|.-.- |...|.++..++= +-=||++ .=.++|..+.
T Consensus 63 ~r~~~d~~l~~~l~~~~~dlvvLAGyMrI--------L~~~fl~~~~grI-----------lNIHPSL--LP~f~G~h~~ 121 (200)
T COG0299 63 SREAFDRALVEALDEYGPDLVVLAGYMRI--------LGPEFLSRFEGRI-----------LNIHPSL--LPAFPGLHAH 121 (200)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcchHHH--------cCHHHHHHhhcce-----------EecCccc--ccCCCCchHH
Confidence 455555 6999999988888888776532 5555555443321 1238999 9999999999
Q ss_pred HHHHHhCCCEeecccc
Q 037640 287 LEGVCAGLPLLTWPLF 302 (398)
Q Consensus 287 ~eal~~GvP~l~~P~~ 302 (398)
.+|+.+|+..-++-.+
T Consensus 122 ~~A~~aG~k~sG~TVH 137 (200)
T COG0299 122 EQALEAGVKVSGCTVH 137 (200)
T ss_pred HHHHHcCCCccCcEEE
Confidence 9999999998776654
No 293
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=20.80 E-value=5.8e+02 Score=23.84 Aligned_cols=66 Identities=11% Similarity=0.065 Sum_probs=43.3
Q ss_pred cCCCcceeeecCCchhHHHHHHhCCCEeeccccc--chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHH
Q 037640 270 SHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFA--DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKN 347 (398)
Q Consensus 270 ~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 347 (398)
-||++ .=...|.+....|+.+|+...++-++. +..+....+. ...+.+.. .-|.++|.+
T Consensus 193 iHpSL--LP~yrG~~~~~~ai~~G~~~tG~TiH~v~~~~D~G~Ii~---Q~~v~i~~--------------~dt~~~L~~ 253 (286)
T PRK06027 193 IHHSF--LPAFKGAKPYHQAYERGVKLIGATAHYVTADLDEGPIIE---QDVIRVDH--------------RDTAEDLVR 253 (286)
T ss_pred cCccc--CCCCCCCCHHHHHHHCCCCeEEEEEEEEcCCCcCCCcEE---EEEEEcCC--------------CCCHHHHHH
Confidence 36666 666779999999999999998887653 3444444442 22333333 247888888
Q ss_pred HHHHHhc
Q 037640 348 AVERLMD 354 (398)
Q Consensus 348 ai~~vl~ 354 (398)
.+.++-.
T Consensus 254 ri~~~E~ 260 (286)
T PRK06027 254 AGRDVEK 260 (286)
T ss_pred HHHHHHH
Confidence 8876443
No 294
>PRK06546 pyruvate dehydrogenase; Provisional
Probab=20.78 E-value=3.3e+02 Score=28.27 Aligned_cols=28 Identities=21% Similarity=0.356 Sum_probs=22.2
Q ss_pred CcceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
+.+++++|.|- ++++||...++|+|++.
T Consensus 66 k~~v~~v~~GpG~~N~~~gl~~A~~~~~Pvl~I~ 99 (578)
T PRK06546 66 KLAVCAGSCGPGNLHLINGLYDAHRSGAPVLAIA 99 (578)
T ss_pred CceEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 34458888773 48899999999999985
No 295
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=20.50 E-value=1.3e+02 Score=29.82 Aligned_cols=31 Identities=19% Similarity=0.290 Sum_probs=24.6
Q ss_pred HHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 24 NLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 24 ~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
+.+++ .++|++|... -+..+|+++|||.+.+
T Consensus 349 ~~l~~--~~pDllig~s---~~~~~A~k~gIP~vr~ 379 (422)
T TIGR02015 349 EAVLE--FEPDLAIGTT---PLVQFAKEHGIPALYF 379 (422)
T ss_pred HHHhh--CCCCEEEcCC---cchHHHHHcCCCEEEe
Confidence 45556 7999999773 4666899999999975
No 296
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=20.17 E-value=2e+02 Score=25.34 Aligned_cols=29 Identities=24% Similarity=0.383 Sum_probs=25.8
Q ss_pred CCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 31 PQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 31 ~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
-++.+||+|--...+..-|++.|||+.++
T Consensus 28 a~i~~Visd~~~A~~lerA~~~gIpt~~~ 56 (200)
T COG0299 28 AEIVAVISDKADAYALERAAKAGIPTVVL 56 (200)
T ss_pred cEEEEEEeCCCCCHHHHHHHHcCCCEEEe
Confidence 36889999988889999999999999875
Done!