Query 037640
Match_columns 398
No_of_seqs 177 out of 1578
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 04:16:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037640.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037640hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.2E-58 7.4E-63 456.2 34.3 354 7-395 91-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3.5E-53 1.2E-57 424.4 39.4 366 8-396 83-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.6E-53 8.7E-58 426.3 35.2 367 9-397 89-480 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 9.3E-53 3.2E-57 418.8 34.6 355 7-396 86-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 9.8E-52 3.3E-56 412.4 34.6 357 11-395 92-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 5.2E-34 1.8E-38 281.4 29.0 307 11-375 90-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 2.8E-32 9.6E-37 266.4 20.2 159 182-376 225-385 (400)
8 1iir_A Glycosyltransferase GTF 100.0 6E-31 2E-35 258.9 21.7 207 129-396 193-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 3E-30 1E-34 253.9 19.4 191 129-374 193-384 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1E-28 3.5E-33 242.5 29.6 300 11-392 99-410 (415)
11 2p6p_A Glycosyl transferase; X 100.0 5.7E-29 2E-33 241.9 22.9 259 17-375 94-363 (384)
12 2iyf_A OLED, oleandomycin glyc 100.0 4.2E-28 1.4E-32 239.3 28.0 289 13-375 87-383 (430)
13 3ia7_A CALG4; glycosysltransfe 100.0 3.9E-28 1.3E-32 236.9 27.2 309 11-392 83-395 (402)
14 3h4t_A Glycosyltransferase GTF 100.0 2.3E-28 7.9E-33 239.7 24.2 190 130-374 177-366 (404)
15 2yjn_A ERYCIII, glycosyltransf 100.0 7.6E-28 2.6E-32 238.6 21.1 162 182-375 255-419 (441)
16 2o6l_A UDP-glucuronosyltransfe 99.9 1.7E-27 5.9E-32 205.2 15.4 162 180-374 7-169 (170)
17 4fzr_A SSFS6; structural genom 99.9 1.9E-25 6.3E-30 218.2 19.4 160 183-374 216-383 (398)
18 3oti_A CALG3; calicheamicin, T 99.9 4.3E-24 1.5E-28 208.6 22.2 156 183-374 221-380 (398)
19 3tsa_A SPNG, NDP-rhamnosyltran 99.9 9.2E-24 3.2E-28 205.5 23.1 158 184-374 208-371 (391)
20 3otg_A CALG1; calicheamicin, T 99.9 4.1E-22 1.4E-26 195.0 26.5 160 184-374 231-391 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.8 7E-19 2.4E-23 169.9 18.0 150 192-369 178-338 (365)
22 2jzc_A UDP-N-acetylglucosamine 99.6 7.2E-15 2.5E-19 130.7 10.2 120 192-322 26-184 (224)
23 1f0k_A MURG, UDP-N-acetylgluco 99.5 2.9E-12 9.9E-17 122.6 18.8 147 193-366 182-334 (364)
24 3hbm_A UDP-sugar hydrolase; PS 99.0 1.2E-09 4.1E-14 100.8 12.0 116 194-324 157-274 (282)
25 3dzc_A UDP-N-acetylglucosamine 98.8 6.3E-08 2.2E-12 94.0 15.3 131 193-356 229-368 (396)
26 3okp_A GDP-mannose-dependent a 98.8 3.8E-06 1.3E-10 80.4 26.9 262 19-370 75-359 (394)
27 4hwg_A UDP-N-acetylglucosamine 98.8 2.3E-07 7.7E-12 89.7 17.1 258 12-363 76-350 (385)
28 1v4v_A UDP-N-acetylglucosamine 98.8 2.4E-07 8.3E-12 88.7 17.1 129 194-356 198-335 (376)
29 1vgv_A UDP-N-acetylglucosamine 98.7 5.8E-08 2E-12 93.2 12.5 140 193-365 204-352 (384)
30 3ot5_A UDP-N-acetylglucosamine 98.7 4E-07 1.4E-11 88.5 16.5 159 193-392 223-390 (403)
31 2gek_A Phosphatidylinositol ma 98.6 1.1E-05 3.7E-10 77.6 22.6 144 196-370 209-364 (406)
32 2jjm_A Glycosyl transferase, g 98.5 5.2E-05 1.8E-09 72.7 24.6 143 196-370 212-365 (394)
33 3c48_A Predicted glycosyltrans 98.5 4.3E-05 1.5E-09 74.3 24.0 97 254-372 305-408 (438)
34 2f9f_A First mannosyl transfer 98.5 2.1E-06 7.1E-11 73.2 12.7 139 197-366 25-174 (177)
35 3fro_A GLGA glycogen synthase; 98.2 0.0017 5.9E-08 62.5 27.7 145 196-371 252-412 (439)
36 2iw1_A Lipopolysaccharide core 98.0 4.3E-05 1.5E-09 72.4 12.6 147 196-372 197-354 (374)
37 3beo_A UDP-N-acetylglucosamine 97.9 2.8E-05 9.6E-10 73.9 8.1 132 193-357 204-344 (375)
38 3qhp_A Type 1 capsular polysac 97.8 0.00013 4.4E-09 60.8 11.1 143 195-372 2-157 (166)
39 3q3e_A HMW1C-like glycosyltran 97.8 0.00029 1E-08 71.0 14.0 152 195-369 441-602 (631)
40 4gyw_A UDP-N-acetylglucosamine 97.8 0.0003 1E-08 73.3 14.3 151 193-364 521-677 (723)
41 2vsy_A XCC0866; transferase, g 97.7 0.0013 4.3E-08 66.3 17.6 96 255-369 434-536 (568)
42 2bfw_A GLGA glycogen synthase; 97.6 0.0011 3.9E-08 56.7 14.2 144 197-371 38-197 (200)
43 2x6q_A Trehalose-synthase TRET 97.6 0.0018 6E-08 62.4 16.0 93 254-370 292-394 (416)
44 2xci_A KDO-transferase, 3-deox 97.4 0.0013 4.5E-08 62.8 12.6 98 256-374 261-364 (374)
45 2r60_A Glycosyl transferase, g 97.3 0.00088 3E-08 66.3 10.4 96 254-371 334-440 (499)
46 2iuy_A Avigt4, glycosyltransfe 97.1 0.0034 1.2E-07 58.6 11.8 127 197-354 164-307 (342)
47 3oy2_A Glycosyltransferase B73 97.1 0.016 5.5E-07 55.4 16.5 91 257-369 256-369 (413)
48 2qzs_A Glycogen synthase; glyc 96.9 0.0075 2.6E-07 59.2 12.4 141 196-366 293-455 (485)
49 1rzu_A Glycogen synthase 1; gl 96.9 0.0046 1.6E-07 60.8 10.8 141 196-366 292-454 (485)
50 3rhz_A GTF3, nucleotide sugar 96.8 0.0036 1.2E-07 59.0 9.1 112 256-395 215-338 (339)
51 3s28_A Sucrose synthase 1; gly 96.2 0.032 1.1E-06 58.5 12.4 95 254-370 639-749 (816)
52 2x0d_A WSAF; GT4 family, trans 94.3 0.13 4.3E-06 49.6 8.7 80 255-357 295-381 (413)
53 2hy7_A Glucuronosyltransferase 93.1 0.13 4.5E-06 49.3 6.5 78 254-357 264-354 (406)
54 3vue_A GBSS-I, granule-bound s 92.0 1.5 5.2E-05 43.6 12.7 138 197-354 329-476 (536)
55 3tov_A Glycosyl transferase fa 89.5 0.96 3.3E-05 42.3 8.1 97 193-299 184-286 (349)
56 3t5t_A Putative glycosyltransf 86.4 11 0.00038 36.9 13.7 108 256-395 353-471 (496)
57 1psw_A ADP-heptose LPS heptosy 83.0 2.8 9.4E-05 38.6 7.4 97 193-299 179-286 (348)
58 2gt1_A Lipopolysaccharide hept 82.7 0.7 2.4E-05 42.5 3.1 136 193-355 177-322 (326)
59 3dfz_A SIRC, precorrin-2 dehyd 80.1 2.2 7.4E-05 37.2 5.1 159 184-376 23-186 (223)
60 3nb0_A Glycogen [starch] synth 76.7 3.5 0.00012 42.0 6.1 43 260-302 498-551 (725)
61 2iz6_A Molybdenum cofactor car 73.4 38 0.0013 28.0 11.3 101 182-302 35-140 (176)
62 1uqt_A Alpha, alpha-trehalose- 70.5 11 0.00038 36.7 8.0 107 257-395 333-452 (482)
63 2lpm_A Two-component response 64.1 5.5 0.00019 30.9 3.5 38 20-59 43-85 (123)
64 3to5_A CHEY homolog; alpha(5)b 58.5 12 0.00042 29.3 4.7 40 22-63 49-97 (134)
65 3gl9_A Response regulator; bet 54.0 22 0.00075 26.5 5.4 40 21-62 37-85 (122)
66 3t6k_A Response regulator rece 46.4 33 0.0011 26.1 5.4 41 20-62 38-87 (136)
67 1pjq_A CYSG, siroheme synthase 46.1 47 0.0016 32.0 7.5 154 187-376 7-168 (457)
68 3m6m_D Sensory/regulatory prot 45.6 25 0.00086 27.1 4.6 40 21-62 49-99 (143)
69 2w36_A Endonuclease V; hypoxan 43.2 35 0.0012 29.4 5.4 41 19-59 90-137 (225)
70 3f6p_A Transcriptional regulat 42.6 40 0.0014 24.8 5.3 41 20-62 36-82 (120)
71 3goc_A Endonuclease V; alpha-b 42.2 38 0.0013 29.5 5.4 41 19-59 94-141 (237)
72 3e9m_A Oxidoreductase, GFO/IDH 40.8 2E+02 0.0069 25.8 11.0 110 196-324 8-125 (330)
73 2hbv_A 2-amino-3-carboxymucona 38.7 53 0.0018 29.7 6.3 50 182-232 131-180 (334)
74 2pju_A Propionate catabolism o 37.9 53 0.0018 28.3 5.8 29 274-303 64-92 (225)
75 3gt7_A Sensor protein; structu 37.2 52 0.0018 25.5 5.4 41 20-62 41-90 (154)
76 3ip3_A Oxidoreductase, putativ 37.0 1.1E+02 0.0038 27.6 8.3 59 261-319 55-120 (337)
77 3l4e_A Uncharacterized peptida 36.9 53 0.0018 27.8 5.5 48 182-229 16-63 (206)
78 3c3m_A Response regulator rece 36.8 54 0.0019 24.7 5.3 41 20-62 37-86 (138)
79 1dbw_A Transcriptional regulat 36.8 61 0.0021 23.8 5.5 41 20-62 37-84 (126)
80 4e5s_A MCCFLIKE protein (BA_56 36.5 43 0.0015 30.8 5.2 73 208-302 63-137 (331)
81 2q5c_A NTRC family transcripti 33.4 45 0.0015 27.9 4.5 32 271-303 49-80 (196)
82 3nhm_A Response regulator; pro 33.3 78 0.0027 23.4 5.7 41 20-62 37-86 (133)
83 3pdi_B Nitrogenase MOFE cofact 32.2 37 0.0013 32.7 4.2 34 21-59 366-399 (458)
84 4e7p_A Response regulator; DNA 32.2 69 0.0024 24.5 5.3 41 20-62 56-103 (150)
85 3eod_A Protein HNR; response r 32.1 67 0.0023 23.7 5.0 41 20-62 41-88 (130)
86 3grc_A Sensor protein, kinase; 32.0 70 0.0024 24.0 5.2 41 20-62 40-89 (140)
87 3q2i_A Dehydrogenase; rossmann 32.0 2.7E+02 0.0092 25.1 10.1 110 195-324 15-133 (354)
88 3a10_A Response regulator; pho 31.6 91 0.0031 22.3 5.7 41 20-62 35-82 (116)
89 3ga2_A Endonuclease V; alpha-b 31.6 51 0.0017 28.8 4.5 40 20-59 97-143 (246)
90 2rjn_A Response regulator rece 31.6 69 0.0024 24.6 5.2 42 20-63 41-89 (154)
91 1rcu_A Conserved hypothetical 31.6 2.3E+02 0.0077 23.6 9.2 98 181-301 47-150 (195)
92 3cg0_A Response regulator rece 31.5 60 0.002 24.3 4.7 41 20-62 44-91 (140)
93 2q5c_A NTRC family transcripti 31.1 79 0.0027 26.4 5.6 30 31-63 141-170 (196)
94 2qr3_A Two-component system re 30.8 73 0.0025 23.8 5.1 42 20-63 37-90 (140)
95 2wqk_A 5'-nucleotidase SURE; S 30.7 37 0.0013 29.9 3.6 38 22-61 77-127 (251)
96 1tmy_A CHEY protein, TMY; chem 30.7 67 0.0023 23.2 4.8 41 21-63 38-85 (120)
97 3tl4_X Glutaminyl-tRNA synthet 30.2 54 0.0018 27.4 4.3 65 312-395 107-178 (187)
98 1zgz_A Torcad operon transcrip 29.8 77 0.0026 23.0 5.0 41 20-62 36-82 (122)
99 3s2u_A UDP-N-acetylglucosamine 29.7 23 0.00077 32.9 2.1 36 196-233 5-40 (365)
100 3irs_A Uncharacterized protein 29.7 67 0.0023 28.5 5.3 119 140-291 79-201 (291)
101 3hv2_A Response regulator/HD d 29.5 66 0.0023 24.7 4.7 41 20-62 48-95 (153)
102 4h1h_A LMO1638 protein; MCCF-l 29.5 62 0.0021 29.5 5.1 72 208-301 63-136 (327)
103 3kht_A Response regulator; PSI 29.4 97 0.0033 23.3 5.7 41 20-62 41-90 (144)
104 1u0t_A Inorganic polyphosphate 29.3 70 0.0024 28.8 5.4 30 270-301 74-107 (307)
105 1zl0_A Hypothetical protein PA 29.0 82 0.0028 28.6 5.7 74 207-302 64-139 (311)
106 3nur_A Amidohydrolase; TIM bar 29.0 52 0.0018 30.4 4.5 74 147-232 122-195 (357)
107 2a33_A Hypothetical protein; s 28.9 1.6E+02 0.0055 25.0 7.3 45 257-301 93-147 (215)
108 2a9o_A Response regulator; ess 28.7 84 0.0029 22.6 5.0 40 21-62 36-81 (120)
109 2qxy_A Response regulator; reg 28.7 73 0.0025 23.9 4.8 40 20-62 38-84 (142)
110 3b2n_A Uncharacterized protein 28.5 69 0.0024 23.9 4.6 40 21-62 40-86 (133)
111 3db2_A Putative NADPH-dependen 28.4 2.1E+02 0.0071 25.9 8.6 109 196-324 8-124 (354)
112 2pl1_A Transcriptional regulat 28.4 1.1E+02 0.0037 22.0 5.6 41 20-62 34-81 (121)
113 2lnd_A De novo designed protei 28.4 84 0.0029 22.1 4.3 48 292-354 50-100 (112)
114 2rdm_A Response regulator rece 28.3 97 0.0033 22.7 5.4 41 20-62 39-88 (132)
115 2kmf_A Photosystem II 11 kDa p 28.3 1.2E+02 0.004 23.1 5.5 54 344-397 22-83 (115)
116 1v5e_A Pyruvate oxidase; oxido 28.2 1.1E+02 0.0038 30.3 7.1 29 272-300 67-101 (590)
117 2wm1_A 2-amino-3-carboxymucona 28.1 51 0.0018 29.8 4.3 72 146-232 103-177 (336)
118 3i42_A Response regulator rece 28.1 80 0.0027 23.1 4.8 41 20-62 37-86 (127)
119 3ahc_A Phosphoketolase, xylulo 27.4 2.9E+02 0.01 28.8 10.1 43 339-382 771-813 (845)
120 3rqi_A Response regulator prot 27.4 59 0.002 26.2 4.2 40 21-62 42-88 (184)
121 3cu5_A Two component transcrip 27.2 79 0.0027 23.9 4.8 38 22-61 41-85 (141)
122 1xhf_A DYE resistance, aerobic 27.2 1E+02 0.0035 22.3 5.3 41 20-62 37-83 (123)
123 1qkk_A DCTD, C4-dicarboxylate 27.2 1.8E+02 0.006 22.1 7.0 48 291-354 73-120 (155)
124 2qzj_A Two-component response 26.9 83 0.0028 23.6 4.8 41 20-62 38-84 (136)
125 1t35_A Hypothetical protein YV 26.7 1.7E+02 0.0059 24.2 7.0 103 182-301 23-135 (191)
126 3crn_A Response regulator rece 26.6 1E+02 0.0034 22.9 5.2 41 20-62 37-84 (132)
127 3euw_A MYO-inositol dehydrogen 26.4 3.5E+02 0.012 24.2 12.1 109 196-324 7-123 (344)
128 3ip0_A 2-amino-4-hydroxy-6-hyd 26.4 67 0.0023 26.0 4.1 28 196-223 2-29 (158)
129 3sr3_A Microcin immunity prote 26.3 75 0.0026 29.1 5.0 73 208-302 64-138 (336)
130 1mb3_A Cell division response 26.3 77 0.0026 23.0 4.4 40 21-62 36-84 (124)
131 3lp6_A Phosphoribosylaminoimid 26.2 2.7E+02 0.0092 22.8 10.7 143 195-377 8-157 (174)
132 3sz8_A 2-dehydro-3-deoxyphosph 26.2 3.5E+02 0.012 24.1 11.6 32 198-233 113-144 (285)
133 1srr_A SPO0F, sporulation resp 26.0 74 0.0025 23.2 4.2 40 21-62 38-84 (124)
134 4dik_A Flavoprotein; TM0755, e 25.7 63 0.0022 30.6 4.5 47 182-228 253-299 (410)
135 3eul_A Possible nitrate/nitrit 25.7 72 0.0025 24.4 4.3 41 20-62 51-98 (152)
136 1p6q_A CHEY2; chemotaxis, sign 25.6 90 0.0031 22.9 4.7 40 21-62 42-90 (129)
137 3beo_A UDP-N-acetylglucosamine 25.4 86 0.003 28.3 5.4 39 19-59 84-125 (375)
138 1ydh_A AT5G11950; structural g 25.3 43 0.0015 28.7 2.9 45 257-301 89-143 (216)
139 3lte_A Response regulator; str 25.2 1.1E+02 0.0038 22.4 5.2 41 20-62 40-88 (132)
140 3ia7_A CALG4; glycosysltransfe 25.2 1.6E+02 0.0054 26.7 7.2 34 196-231 7-40 (402)
141 3ci9_A Heat shock factor-bindi 25.0 50 0.0017 20.9 2.4 42 341-388 3-44 (48)
142 3jte_A Response regulator rece 25.0 1E+02 0.0035 23.1 5.1 43 20-62 37-86 (143)
143 3cz5_A Two-component response 25.0 1.3E+02 0.0044 22.9 5.7 40 21-62 42-88 (153)
144 4hkt_A Inositol 2-dehydrogenas 24.9 3.7E+02 0.013 23.9 11.1 108 196-324 6-121 (331)
145 4grd_A N5-CAIR mutase, phospho 24.9 2.8E+02 0.0097 22.6 8.3 86 194-304 12-101 (173)
146 4ep4_A Crossover junction endo 24.7 1.3E+02 0.0043 24.6 5.5 50 11-62 44-108 (166)
147 1jbe_A Chemotaxis protein CHEY 24.6 1.3E+02 0.0043 21.9 5.4 40 21-62 40-88 (128)
148 1f9y_A HPPK, protein (6-hydrox 24.4 75 0.0026 25.7 4.1 28 196-223 2-29 (158)
149 2qx0_A 7,8-dihydro-6-hydroxyme 24.2 1E+02 0.0035 24.9 4.9 28 196-223 3-30 (159)
150 2y6x_A PSB27, photosystem II 1 24.1 1.7E+02 0.0059 22.1 5.7 54 344-397 18-79 (113)
151 3u7q_A Nitrogenase molybdenum- 23.7 57 0.002 31.7 3.8 35 19-58 406-440 (492)
152 3cfy_A Putative LUXO repressor 23.6 97 0.0033 23.2 4.6 41 20-62 38-85 (137)
153 3tsa_A SPNG, NDP-rhamnosyltran 23.5 97 0.0033 28.3 5.4 28 271-300 114-142 (391)
154 3pdi_A Nitrogenase MOFE cofact 23.4 63 0.0022 31.3 4.1 36 19-59 390-425 (483)
155 3c97_A Signal transduction his 23.4 1.4E+02 0.0048 22.2 5.5 29 21-51 45-75 (140)
156 3li6_A Calcium-binding protein 23.3 1.4E+02 0.0049 18.6 5.1 53 335-396 12-64 (66)
157 3i23_A Oxidoreductase, GFO/IDH 23.2 4.1E+02 0.014 23.8 9.9 111 196-324 5-123 (349)
158 3o1l_A Formyltetrahydrofolate 23.2 2.3E+02 0.008 25.4 7.6 72 210-302 168-239 (302)
159 3hzh_A Chemotaxis response reg 23.1 98 0.0033 23.9 4.6 40 21-62 72-120 (157)
160 3da8_A Probable 5'-phosphoribo 23.1 3.4E+02 0.012 22.9 8.8 69 213-302 79-147 (215)
161 3qxc_A Dethiobiotin synthetase 23.0 95 0.0032 26.9 4.8 44 19-62 118-170 (242)
162 2i2c_A Probable inorganic poly 23.0 40 0.0014 29.9 2.4 29 273-301 35-69 (272)
163 1mio_B Nitrogenase molybdenum 22.7 80 0.0027 30.3 4.7 36 19-59 374-409 (458)
164 2xvy_A Chelatase, putative; me 22.4 94 0.0032 27.1 4.8 39 194-232 10-50 (269)
165 3hww_A 2-succinyl-5-enolpyruvy 22.4 1.8E+02 0.0062 28.4 7.4 28 273-300 71-104 (556)
166 2q28_A Oxalyl-COA decarboxylas 22.2 1.6E+02 0.0055 28.8 6.9 26 275-300 72-103 (564)
167 3e18_A Oxidoreductase; dehydro 22.1 4.4E+02 0.015 23.8 11.3 108 196-324 8-123 (359)
168 1kgs_A DRRD, DNA binding respo 22.0 1.2E+02 0.0042 24.9 5.4 42 20-63 36-84 (225)
169 3fgn_A Dethiobiotin synthetase 21.8 1.2E+02 0.0042 26.3 5.4 44 19-62 113-166 (251)
170 3n53_A Response regulator rece 21.8 77 0.0026 23.8 3.7 41 20-62 36-85 (140)
171 2qv0_A Protein MRKE; structura 21.8 1.5E+02 0.005 22.1 5.4 30 21-52 46-77 (143)
172 3q9s_A DNA-binding response re 21.7 1.2E+02 0.0042 25.8 5.3 40 21-62 72-117 (249)
173 1ys7_A Transcriptional regulat 21.7 1.3E+02 0.0044 25.0 5.4 40 20-61 41-87 (233)
174 1ozh_A ALS, acetolactate synth 21.6 2.3E+02 0.0078 27.8 7.9 27 274-300 74-106 (566)
175 2pju_A Propionate catabolism o 21.4 1.2E+02 0.0041 26.0 5.0 28 31-61 153-180 (225)
176 3qbc_A 2-amino-4-hydroxy-6-hyd 21.4 94 0.0032 25.2 4.1 28 196-223 6-33 (161)
177 3rg8_A Phosphoribosylaminoimid 21.2 3.2E+02 0.011 21.9 10.6 83 196-302 4-90 (159)
178 3lq1_A 2-succinyl-5-enolpyruvy 21.1 3.4E+02 0.011 26.6 9.0 80 212-300 14-107 (578)
179 1q1v_A DEK protein; winged-hel 20.9 2.1E+02 0.007 19.5 5.2 53 339-394 11-65 (70)
180 1h6d_A Precursor form of gluco 20.8 3.8E+02 0.013 25.1 9.1 115 196-324 86-208 (433)
181 3nrb_A Formyltetrahydrofolate 20.7 1.9E+02 0.0066 25.7 6.4 69 213-302 155-223 (287)
182 2j48_A Two-component sensor ki 20.5 1.3E+02 0.0043 21.2 4.6 41 20-62 35-84 (119)
183 1cbk_A Protein (7,8-dihydro-6- 20.5 1E+02 0.0034 25.0 4.1 28 196-223 3-30 (160)
184 3mm4_A Histidine kinase homolo 20.4 86 0.0029 25.9 3.9 32 31-62 118-160 (206)
185 3bbn_B Ribosomal protein S2; s 20.1 61 0.0021 28.1 2.8 31 31-61 156-188 (231)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.2e-58 Score=456.18 Aligned_cols=354 Identities=29% Similarity=0.479 Sum_probs=289.3
Q ss_pred hHHHHHHHHH-hchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhccc-c--cc
Q 037640 7 LALDFFTAAD-KLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFL-E--SI 82 (398)
Q Consensus 7 ~~~~l~~a~~-~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~-~--~~ 82 (398)
.+..+++++. .+.+.+.+++++.+.++||||+|.+++|+..+|+++|||++.|++++++.+..+++.+..... . ..
T Consensus 91 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~ 170 (454)
T 3hbf_A 91 PIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEV 170 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCcc
Confidence 3455666653 455566666655446899999999999999999999999999999999998887765432111 0 00
Q ss_pred cCCCCccccCCCCccccccccccc-ccC-C--cchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecC
Q 037640 83 SSESEYFSVPGLPDKIELTKKQVD-STQ-G--QKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIG 158 (398)
Q Consensus 83 ~~~~~~~~~pg~~~~~~~~~~~l~-~~~-~--~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vG 158 (398)
..+.....+||+|. ++..++| ++. . ..+..++.+..+....++++++||+++||+++++.++..+ +++++||
T Consensus 171 ~~~~~~~~iPg~p~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~vG 246 (454)
T 3hbf_A 171 HDVKSIDVLPGFPE---LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KLLLNVG 246 (454)
T ss_dssp TTSSCBCCSTTSCC---BCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEECC
T ss_pred ccccccccCCCCCC---cChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEEEC
Confidence 11222235888875 7788888 543 2 2245556666677788999999999999999999887766 7999999
Q ss_pred cccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchh
Q 037640 159 PVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKE 238 (398)
Q Consensus 159 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 238 (398)
|++...+... ...++++.+||+.+++++||||||||+...+.+++.+++.+|++.+++|||+++....
T Consensus 247 Pl~~~~~~~~---------~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~--- 314 (454)
T 3hbf_A 247 PFNLTTPQRK---------VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPK--- 314 (454)
T ss_dssp CHHHHSCCSC---------CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHH---
T ss_pred Cccccccccc---------ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcch---
Confidence 9976432110 1125679999999888899999999999999999999999999999999999987532
Q ss_pred hhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHH-hc
Q 037640 239 LKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHL-LK 317 (398)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~-~g 317 (398)
+. +|++|.++.. .|+.+.+|+||.++|+|+++++|||||||||++||+++|||||++|+++||+.||++++ + +|
T Consensus 315 -~~--lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~-~~~g 389 (454)
T 3hbf_A 315 -EK--LPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTE-SVLE 389 (454)
T ss_dssp -HH--SCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH-TTSC
T ss_pred -hc--CCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHH-HhhC
Confidence 12 8888887764 56777799999999999999999999999999999999999999999999999999996 6 79
Q ss_pred ceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 318 IGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 318 ~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
+|+.+... .+++++|.++|+++|+| +++++||+||+++++.+++++.+||||.+++++||+++.
T Consensus 390 ~Gv~l~~~-------------~~~~~~l~~av~~ll~~-~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 390 IGVGVDNG-------------VLTKESIKKALELTMSS-EKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp SEEECGGG-------------SCCHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred eeEEecCC-------------CCCHHHHHHHHHHHHCC-ChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 99999764 58999999999999975 567899999999999999999999999999999999885
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.5e-53 Score=424.45 Aligned_cols=366 Identities=29% Similarity=0.494 Sum_probs=280.7
Q ss_pred HHHHHHHHHhchHHHHHHHhhc--CCCC-cEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhc--ccccc
Q 037640 8 ALDFFTAADKLLEPVENLFGQL--KPQP-NCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASK--FLESI 82 (398)
Q Consensus 8 ~~~l~~a~~~~~~~l~~~L~~~--~~~~-D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~--~~~~~ 82 (398)
...+..++..+.+.+.++++++ ..++ ||||+|.++.|+..+|+++|||++.+++++++....+.+.+... .....
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEF 162 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSCG
T ss_pred HHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCcc
Confidence 3445566677788888888763 3578 99999999999999999999999999999888776665444211 00000
Q ss_pred cCCCCccccCCCCccccccccccc-ccCCc--chHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhc--CCceeec
Q 037640 83 SSESEYFSVPGLPDKIELTKKQVD-STQGQ--KFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKIS--RDKAWCI 157 (398)
Q Consensus 83 ~~~~~~~~~pg~~~~~~~~~~~l~-~~~~~--~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~--~~~v~~v 157 (398)
.....+..+|++++ +...+++ .+... .....+.+.......++++++||++++|+.++..+.+.. .+++++|
T Consensus 163 ~~~~~~~~~Pg~~p---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~v 239 (480)
T 2vch_A 163 RELTEPLMLPGCVP---VAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYPV 239 (480)
T ss_dssp GGCSSCBCCTTCCC---BCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEEC
T ss_pred cccCCcccCCCCCC---CChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEEE
Confidence 00011234566653 4444555 33221 223333334445567788999999999998877775421 2689999
Q ss_pred CcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCc-
Q 037640 158 GPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETS- 236 (398)
Q Consensus 158 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~- 236 (398)
||++....... ....++++.+||+.++++++|||||||+...+.+++.+++++|++.+++|||+++.....
T Consensus 240 Gpl~~~~~~~~--------~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~ 311 (480)
T 2vch_A 240 GPLVNIGKQEA--------KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIA 311 (480)
T ss_dssp CCCCCCSCSCC-------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSST
T ss_pred ecccccccccc--------CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccc
Confidence 99986432100 011356899999998888999999999999899999999999999999999999864310
Q ss_pred ----------hhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchh
Q 037640 237 ----------KELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQF 306 (398)
Q Consensus 237 ----------~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~ 306 (398)
....+. +|+++.+++++.++++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+
T Consensus 312 ~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~ 390 (480)
T 2vch_A 312 NSSYFDSHSQTDPLTF-LPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQK 390 (480)
T ss_dssp TTTTTCC--CSCGGGG-SCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred cccccccccccchhhh-cCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccch
Confidence 111112 899999999888888878999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHH
Q 037640 307 TNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLN 386 (398)
Q Consensus 307 ~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 386 (398)
.||+++++++|+|+.+...+ ++.+++++|+++|+++|++ +++++||+||+++++.+++++.+||+|.++
T Consensus 391 ~na~~l~~~~G~g~~l~~~~----------~~~~~~~~l~~av~~vl~~-~~~~~~r~~a~~l~~~~~~a~~~gGss~~~ 459 (480)
T 2vch_A 391 MNAVLLSEDIRAALRPRAGD----------DGLVRREEVARVVKGLMEG-EEGKGVRNKMKELKEAACRVLKDDGTSTKA 459 (480)
T ss_dssp HHHHHHHHTTCCEECCCCCT----------TSCCCHHHHHHHHHHHHTS-THHHHHHHHHHHHHHHHHHHTSTTSHHHHH
T ss_pred HHHHHHHHHhCeEEEeeccc----------CCccCHHHHHHHHHHHhcC-cchHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 99999746999999986531 1258999999999999974 356799999999999999999999999999
Q ss_pred HHHHHHHHHc
Q 037640 387 ITLLLQDIMK 396 (398)
Q Consensus 387 ~~~~~~~~~~ 396 (398)
+++||+.+..
T Consensus 460 ~~~~v~~~~~ 469 (480)
T 2vch_A 460 LSLVALKWKA 469 (480)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.6e-53 Score=426.28 Aligned_cols=367 Identities=28% Similarity=0.548 Sum_probs=278.8
Q ss_pred HHHHHHH-HhchHHHHHHHhhc-----CCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccc
Q 037640 9 LDFFTAA-DKLLEPVENLFGQL-----KPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESI 82 (398)
Q Consensus 9 ~~l~~a~-~~~~~~l~~~L~~~-----~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (398)
..++.++ +.+.+.+.++++++ ..++||||+|.++.|+..+|+++|||++.+++++++....+.+.+........
T Consensus 89 ~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (482)
T 2pq6_A 89 PTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGII 168 (482)
T ss_dssp HHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTCS
T ss_pred HHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCCC
Confidence 3455555 56678888888754 25899999999999999999999999999999988776665444321111111
Q ss_pred cCC----------CCc-cccCCCCccccccccccc-ccCC----cchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHH
Q 037640 83 SSE----------SEY-FSVPGLPDKIELTKKQVD-STQG----QKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEY 146 (398)
Q Consensus 83 ~~~----------~~~-~~~pg~~~~~~~~~~~l~-~~~~----~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~ 146 (398)
+.. ... ..+|+++. ++..+++ ++.. ..+..++.+..+...+++++++||+++||+++++.+
T Consensus 169 p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~ 245 (482)
T 2pq6_A 169 PFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINAL 245 (482)
T ss_dssp SCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHH
T ss_pred CCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHH
Confidence 110 011 12455542 4445555 4332 123334445556667889999999999999999988
Q ss_pred HhhcCCceeecCcccCC-CcccchhhccC--CCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCC
Q 037640 147 KKISRDKAWCIGPVSLS-NKEYSDKAQRG--NTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASN 223 (398)
Q Consensus 147 ~~~~~~~v~~vGpl~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 223 (398)
++.+ +++++|||++.. +.......... ......+.++.+||+.++++++|||||||+...+.+++.+++.+|++.+
T Consensus 246 ~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 324 (482)
T 2pq6_A 246 SSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 324 (482)
T ss_dssp HTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 8877 899999999753 11100000000 0111124568999999888899999999999888889999999999999
Q ss_pred CCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeeccccc
Q 037640 224 RPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFA 303 (398)
Q Consensus 224 ~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~ 303 (398)
++|||+++.....+.... +|+++.++. ..|+.+.+|+||.++|+|+++++|||||||||++||+++|||||++|+++
T Consensus 325 ~~~l~~~~~~~~~~~~~~--l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~ 401 (482)
T 2pq6_A 325 KSFLWIIRPDLVIGGSVI--FSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 401 (482)
T ss_dssp CEEEEECCGGGSTTTGGG--SCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred CcEEEEEcCCcccccccc--CcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCccc
Confidence 999999986421111111 677777766 46888889999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCch
Q 037640 304 DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSS 383 (398)
Q Consensus 304 DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~ 383 (398)
||+.||+++++++|+|+.+. . ++++++|.++|+++|+|++ +++||+||+++++.+++++.+||||
T Consensus 402 dQ~~na~~~~~~~G~g~~l~-~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~gGss 466 (482)
T 2pq6_A 402 DQPTDCRFICNEWEIGMEID-T-------------NVKREELAKLINEVIAGDK-GKKMKQKAMELKKKAEENTRPGGCS 466 (482)
T ss_dssp THHHHHHHHHHTSCCEEECC-S-------------SCCHHHHHHHHHHHHTSHH-HHHHHHHHHHHHHHHHHHTSTTCHH
T ss_pred chHHHHHHHHHHhCEEEEEC-C-------------CCCHHHHHHHHHHHHcCCc-HHHHHHHHHHHHHHHHHHHhcCCcH
Confidence 99999999954799999997 4 4899999999999998654 6789999999999999999999999
Q ss_pred HHHHHHHHHHHHcC
Q 037640 384 HLNITLLLQDIMKH 397 (398)
Q Consensus 384 ~~~~~~~~~~~~~~ 397 (398)
.+++++||+++..+
T Consensus 467 ~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 467 YMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988654
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=9.3e-53 Score=418.79 Aligned_cols=355 Identities=26% Similarity=0.438 Sum_probs=272.5
Q ss_pred hHHHHHHHHH-hchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhh---ccccc-
Q 037640 7 LALDFFTAAD-KLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFAS---KFLES- 81 (398)
Q Consensus 7 ~~~~l~~a~~-~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~---~~~~~- 81 (398)
.+..+.+++. .+.+.+.+++++.+.++||||+|.++.|+..+|+++|||+|.+++++++.+..+.+.+.. .....
T Consensus 86 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (456)
T 2c1x_A 86 DIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGI 165 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSCC
T ss_pred HHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCccc
Confidence 3344554542 233444444433236999999999999999999999999999999988776554432211 01000
Q ss_pred -ccCCCCccccCCCCccccccccccc-ccCC----cchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhcCCcee
Q 037640 82 -ISSESEYFSVPGLPDKIELTKKQVD-STQG----QKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAW 155 (398)
Q Consensus 82 -~~~~~~~~~~pg~~~~~~~~~~~l~-~~~~----~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~ 155 (398)
...+....++|+++. ++..+++ ++.. ..+..++.++.+...+++++++||+++||+++++.+++.+ ++++
T Consensus 166 ~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~-~~~~ 241 (456)
T 2c1x_A 166 QGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL-KTYL 241 (456)
T ss_dssp TTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-SCEE
T ss_pred ccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-CCEE
Confidence 001112235677764 4556666 3221 1233445555555677889999999999999888887766 6999
Q ss_pred ecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCC
Q 037640 156 CIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGET 235 (398)
Q Consensus 156 ~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 235 (398)
+|||++...+... ...+.++.+|++.++++++|||||||+...+.+++.+++++|++.+++|||+++....
T Consensus 242 ~vGpl~~~~~~~~---------~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~ 312 (456)
T 2c1x_A 242 NIGPFNLITPPPV---------VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKAR 312 (456)
T ss_dssp ECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGG
T ss_pred EecCcccCccccc---------ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcch
Confidence 9999975432110 0113568899999888899999999999988889999999999999999999986531
Q ss_pred chhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHH
Q 037640 236 SKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHL 315 (398)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 315 (398)
. . +|+++.++. ..|+.+.+|+||.++|+|+++++|||||||||++||+++|||||++|+++||+.||++++ +
T Consensus 313 ~----~--l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~-~ 384 (456)
T 2c1x_A 313 V----H--LPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVE-D 384 (456)
T ss_dssp G----G--SCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH-H
T ss_pred h----h--CCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHH-H
Confidence 1 1 777877665 467888899999999999999999999999999999999999999999999999999996 6
Q ss_pred h-cceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 037640 316 L-KIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDI 394 (398)
Q Consensus 316 ~-g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 394 (398)
. |+|+.+... .+++++|.++|+++|+|++ +++||+||+++++.+++++.+||||.+++++||+++
T Consensus 385 ~~g~g~~l~~~-------------~~~~~~l~~~i~~ll~~~~-~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~ 450 (456)
T 2c1x_A 385 VLEIGVRIEGG-------------VFTKSGLMSCFDQILSQEK-GKKLRENLRALRETADRAVGPKGSSTENFITLVDLV 450 (456)
T ss_dssp TSCCEEECGGG-------------SCCHHHHHHHHHHHHHSHH-HHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred HhCeEEEecCC-------------CcCHHHHHHHHHHHHCCCc-HHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHH
Confidence 6 999999754 5899999999999998654 789999999999999999999999999999999988
Q ss_pred Hc
Q 037640 395 MK 396 (398)
Q Consensus 395 ~~ 396 (398)
..
T Consensus 451 ~~ 452 (456)
T 2c1x_A 451 SK 452 (456)
T ss_dssp TS
T ss_pred Hh
Confidence 54
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=9.8e-52 Score=412.36 Aligned_cols=357 Identities=25% Similarity=0.462 Sum_probs=274.7
Q ss_pred HHHHHHhchHHHHHHHhhc-CCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCC--
Q 037640 11 FFTAADKLLEPVENLFGQL-KPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESE-- 87 (398)
Q Consensus 11 l~~a~~~~~~~l~~~L~~~-~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 87 (398)
++.++..+.+.+.++|+++ ..++||||+|.++.|+..+|+++|||++.+++++++.+..+.+.+.............
T Consensus 92 ~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (463)
T 2acv_A 92 ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDH 171 (463)
T ss_dssp HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCCSSGGG
T ss_pred HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCCCCCccccC
Confidence 6666777888899988763 3589999999999999999999999999999998888776655543210000111111
Q ss_pred -ccccCCC-Cccccccccccc-cc-CCcchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhc--CCceeecCccc
Q 037640 88 -YFSVPGL-PDKIELTKKQVD-ST-QGQKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKIS--RDKAWCIGPVS 161 (398)
Q Consensus 88 -~~~~pg~-~~~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~--~~~v~~vGpl~ 161 (398)
+..+|++ ++ +...+++ ++ .+......+....+....++++++||++++|+.+.+.+.+.. ++++++|||++
T Consensus 172 ~~~~~pg~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~v~~vGpl~ 248 (463)
T 2acv_A 172 QLLNIPGISNQ---VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVGPLL 248 (463)
T ss_dssp CEECCTTCSSC---EEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECCCCC
T ss_pred ceeECCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCcEEEeCCCc
Confidence 3456776 43 4445555 22 211222333333445567888999999999998887776655 67999999998
Q ss_pred CCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcc-cCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhh
Q 037640 162 LSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMC-NLIPSQMMELGLGLEASNRPFIWVIREGETSKELK 240 (398)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 240 (398)
........ ... +..++++.+||+.++++++|||||||+. ..+.+++.+++++|++.+++|||+++.+..
T Consensus 249 ~~~~~~~~----~~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~----- 318 (463)
T 2acv_A 249 DLKGQPNP----KLD-QAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKK----- 318 (463)
T ss_dssp CSSCCCBT----TBC-HHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGG-----
T ss_pred cccccccc----ccc-cccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcc-----
Confidence 64310100 000 0125689999999888899999999999 788888999999999999999999986410
Q ss_pred hccCchhHHHHhc-CCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcce
Q 037640 241 KWVVEDGFEERIK-GRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIG 319 (398)
Q Consensus 241 ~~~l~~~~~~~~~-~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g 319 (398)
. +|+++.++.. ..|+.+.+|+||.++|+|+++++|||||||||++||+++|||||++|+++||+.||+++++++|+|
T Consensus 319 ~--l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g 396 (463)
T 2acv_A 319 V--FPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVG 396 (463)
T ss_dssp G--SCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCE
T ss_pred c--CChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeE
Confidence 1 7777776651 346777789999999999999999999999999999999999999999999999999953699999
Q ss_pred EEec-cCCCCCccccccccc--cccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 320 VKIG-VENPMTWGEEQNIGV--LVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 320 ~~l~-~~~~~~~~~~~~~~~--~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
+.+. ..+ .+ .+++++|.++|+++|++ +++||+||+++++.+++++.+||||.+++++||+++.
T Consensus 397 ~~l~~~~~----------~~~~~~~~~~l~~ai~~ll~~---~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 397 LGLRVDYR----------KGSDVVAAEEIEKGLKDLMDK---DSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp EESCSSCC----------TTCCCCCHHHHHHHHHHHTCT---TCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred EEEecccC----------CCCccccHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 9993 110 02 48999999999999963 1389999999999999999999999999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=5.2e-34 Score=281.38 Aligned_cols=307 Identities=18% Similarity=0.226 Sum_probs=209.3
Q ss_pred HHHHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCccc
Q 037640 11 FFTAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEYFS 90 (398)
Q Consensus 11 l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (398)
+.+.+..+.+.+.+++++ .+|||||+|.++.|+..+|+++|||++.+++.+.........+..... ....... ...
T Consensus 90 ~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~ 165 (424)
T 2iya_A 90 FLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQD-PTADRGE-EAA 165 (424)
T ss_dssp HHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSC-CCC--------
T ss_pred HHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccc-ccccccc-ccc
Confidence 344445667788888888 899999999988899999999999999988765311100000000000 0000000 000
Q ss_pred cC-CCCccccccccccc-ccC-CcchHHHHHH------HHhhhccCcEEEEcChhhccHHHHHHHHhhcCCceeecCccc
Q 037640 91 VP-GLPDKIELTKKQVD-STQ-GQKFKAFEYK------IGAATLAIDGVIINSFEELEPAYVKEYKKISRDKAWCIGPVS 161 (398)
Q Consensus 91 ~p-g~~~~~~~~~~~l~-~~~-~~~~~~~~~~------~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~ 161 (398)
.| +......+. ...+ +.. .........+ ........+.+++++.++++++ ...+++++++|||+.
T Consensus 166 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~~~~vGp~~ 239 (424)
T 2iya_A 166 APAGTGDAEEGA-EAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GDTVGDNYTFVGPTY 239 (424)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----GGGCCTTEEECCCCC
T ss_pred cccccccchhhh-ccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----ccCCCCCEEEeCCCC
Confidence 00 000000000 0000 000 0000011111 0011124567899999988853 245778999999986
Q ss_pred CCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhh
Q 037640 162 LSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKK 241 (398)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~ 241 (398)
... ....+|++..+++++|||+|||......+.+.++++++++.+++++|.++.......
T Consensus 240 ~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~--- 299 (424)
T 2iya_A 240 GDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPAD--- 299 (424)
T ss_dssp CCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCGGG---
T ss_pred CCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCChHH---
Confidence 421 113457776566789999999998666778889999999889999999876532111
Q ss_pred ccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEE
Q 037640 242 WVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVK 321 (398)
Q Consensus 242 ~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~ 321 (398)
+. ..+.|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|...||+.||+++ ++.|+|+.
T Consensus 300 --~~------~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~ 368 (424)
T 2iya_A 300 --LG------EVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERI-VELGLGRH 368 (424)
T ss_dssp --GC------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHTTSEEE
T ss_pred --hc------cCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHH-HHCCCEEE
Confidence 10 01468999999999999999988 999999999999999999999999999999999999 59999999
Q ss_pred eccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHH
Q 037640 322 IGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKM 375 (398)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 375 (398)
+..+ +++.++|.++|+++++|+ +++++++++++.++.
T Consensus 369 ~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 369 IPRD-------------QVTAEKLREAVLAVASDP----GVAERLAAVRQEIRE 405 (424)
T ss_dssp CCGG-------------GCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT
T ss_pred cCcC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 8754 589999999999999887 899999999998764
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.8e-32 Score=266.38 Aligned_cols=159 Identities=20% Similarity=0.286 Sum_probs=129.8
Q ss_pred hhhhhhhcCCCCCceEEEeeCCcccCC--HHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEE
Q 037640 182 HKCLKWLDSKDPKSVVYACLGSMCNLI--PSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVI 259 (398)
Q Consensus 182 ~~~~~~l~~~~~~~vv~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~ 259 (398)
..+.+|++..+++++|||||||+...+ .+.+.++++++++.+.++||..++..... ... + ++|+.+
T Consensus 225 ~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~-~~~--~---------~~~v~~ 292 (400)
T 4amg_A 225 AVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLAL-LGE--L---------PANVRV 292 (400)
T ss_dssp EECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCC-CCC--C---------CTTEEE
T ss_pred ccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccc-ccc--C---------CCCEEE
Confidence 445678888888899999999988744 35678899999999999999987653211 000 2 478999
Q ss_pred eecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCcccccccccc
Q 037640 260 WDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVL 339 (398)
Q Consensus 260 ~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~ 339 (398)
.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+++||+.||+++ ++.|+|+.++.. +
T Consensus 293 ~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v-~~~G~g~~l~~~-------------~ 356 (400)
T 4amg_A 293 VEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL-TGLGIGFDAEAG-------------S 356 (400)
T ss_dssp ECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH-HHHTSEEECCTT-------------T
T ss_pred EeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH-HHCCCEEEcCCC-------------C
Confidence 999999999999887 999999999999999999999999999999999999 599999999765 4
Q ss_pred ccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Q 037640 340 VKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMA 376 (398)
Q Consensus 340 ~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~ 376 (398)
+++ ++|+++|+|+ +||+||+++++.+++.
T Consensus 357 ~~~----~al~~lL~d~----~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 357 LGA----EQCRRLLDDA----GLREAALRVRQEMSEM 385 (400)
T ss_dssp CSH----HHHHHHHHCH----HHHHHHHHHHHHHHTS
T ss_pred chH----HHHHHHHcCH----HHHHHHHHHHHHHHcC
Confidence 555 4677888888 9999999999998754
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.97 E-value=6e-31 Score=258.91 Aligned_cols=207 Identities=18% Similarity=0.149 Sum_probs=158.8
Q ss_pred EEEEcChhhccH-HHHHHHHhhcCCceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccC
Q 037640 129 GVIINSFEELEP-AYVKEYKKISRDKAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNL 207 (398)
Q Consensus 129 ~~li~s~~~le~-~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~ 207 (398)
.+++|+.+++++ + +..+ ++++|||+...... ..+.++.+|++.. +++|||+|||+. .
T Consensus 193 ~~l~~~~~~l~~~~-----~~~~--~~~~vG~~~~~~~~------------~~~~~~~~~l~~~--~~~v~v~~Gs~~-~ 250 (415)
T 1iir_A 193 HPWVAADPVLAPLQ-----PTDL--DAVQTGAWILPDER------------PLSPELAAFLDAG--PPPVYLGFGSLG-A 250 (415)
T ss_dssp SCEECSCTTTSCCC-----CCSS--CCEECCCCCCCCCC------------CCCHHHHHHHHTS--SCCEEEECC----C
T ss_pred CEEEeeChhhcCCC-----cccC--CeEeeCCCccCccc------------CCCHHHHHHHhhC--CCeEEEeCCCCC-C
Confidence 578899888874 2 1122 89999999754221 1256789999865 358999999997 5
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHH
Q 037640 208 IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTL 287 (398)
Q Consensus 208 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~ 287 (398)
..+.+..+++++++.+.+++|+++..... ... + ++|+.+.+|+||.++|+++++ ||||||+||++
T Consensus 251 ~~~~~~~~~~al~~~~~~~v~~~g~~~~~--~~~--~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~ 315 (415)
T 1iir_A 251 PADAVRVAIDAIRAHGRRVILSRGWADLV--LPD--D---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTH 315 (415)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECTTCTTCC--CSS--C---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHH
T ss_pred cHHHHHHHHHHHHHCCCeEEEEeCCCccc--ccC--C---------CCCEEEeCcCChHHHHhhCCE--EEeCCChhHHH
Confidence 56777889999999999999998764311 000 2 358999999999999965555 99999999999
Q ss_pred HHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHH
Q 037640 288 EGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRAL 367 (398)
Q Consensus 288 eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~ 367 (398)
||+++|||+|++|+.+||..||+++ ++.|+|+.+... +++.++|.++|+++ +|+ +|+++++
T Consensus 316 Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~ 376 (415)
T 1iir_A 316 VAARAGAPQILLPQMADQPYYAGRV-AELGVGVAHDGP-------------IPTFDSLSAALATA-LTP----ETHARAT 376 (415)
T ss_dssp HHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHH-TSH----HHHHHHH
T ss_pred HHHHcCCCEEECCCCCccHHHHHHH-HHCCCcccCCcC-------------CCCHHHHHHHHHHH-cCH----HHHHHHH
Confidence 9999999999999999999999999 599999998754 58999999999999 876 8999999
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHc
Q 037640 368 NLAKMAKMAIQEGGSSHLNITLLLQDIMK 396 (398)
Q Consensus 368 ~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (398)
++++.++. ......+.+.|..+..
T Consensus 377 ~~~~~~~~-----~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 377 AVAGTIRT-----DGAAVAARLLLDAVSR 400 (415)
T ss_dssp HHHHHSCS-----CHHHHHHHHHHHHHHT
T ss_pred HHHHHHhh-----cChHHHHHHHHHHHHh
Confidence 98888642 2233445555555544
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.97 E-value=3e-30 Score=253.89 Aligned_cols=191 Identities=19% Similarity=0.077 Sum_probs=154.5
Q ss_pred EEEEcChhhccHHHHHHHHhhcCCceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCccc-C
Q 037640 129 GVIINSFEELEPAYVKEYKKISRDKAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCN-L 207 (398)
Q Consensus 129 ~~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~-~ 207 (398)
.+++++.++++++. ..+ ++++|||+...... ..+.++.+|++.. +++|||+|||+.. .
T Consensus 193 ~~l~~~~~~l~~~~-----~~~--~~~~vG~~~~~~~~------------~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~ 251 (416)
T 1rrv_A 193 RPLLAADPVLAPLQ-----PDV--DAVQTGAWLLSDER------------PLPPELEAFLAAG--SPPVHIGFGSSSGRG 251 (416)
T ss_dssp SCEECSCTTTSCCC-----SSC--CCEECCCCCCCCCC------------CCCHHHHHHHHSS--SCCEEECCTTCCSHH
T ss_pred CeEEccCccccCCC-----CCC--CeeeECCCccCccC------------CCCHHHHHHHhcC--CCeEEEecCCCCccC
Confidence 57889988887431 122 89999999764221 1256788999865 3589999999975 3
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHH
Q 037640 208 IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTL 287 (398)
Q Consensus 208 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~ 287 (398)
..+.+.++++++++.+.+|+|+++..... ... + ++|+.+.+|+||.++|+++++ ||||||+||++
T Consensus 252 ~~~~~~~~~~al~~~~~~~v~~~g~~~~~--~~~--~---------~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~ 316 (416)
T 1rrv_A 252 IADAAKVAVEAIRAQGRRVILSRGWTELV--LPD--D---------RDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEH 316 (416)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECTTTTCC--CSC--C---------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHH
T ss_pred hHHHHHHHHHHHHHCCCeEEEEeCCcccc--ccC--C---------CCCEEEeccCChHHHhccCCE--EEecCChhHHH
Confidence 45567789999999999999998765311 000 1 468999999999999966666 99999999999
Q ss_pred HHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHH
Q 037640 288 EGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRAL 367 (398)
Q Consensus 288 eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~ 367 (398)
||+++|||+|++|+..||+.||+++ ++.|+|+.+... +++.++|.++|+++ .|+ +|+++++
T Consensus 317 Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~-------------~~~~~~l~~~i~~l-~~~----~~~~~~~ 377 (416)
T 1rrv_A 317 VATRAGVPQLVIPRNTDQPYFAGRV-AALGIGVAHDGP-------------TPTFESLSAALTTV-LAP----ETRARAE 377 (416)
T ss_dssp HHHHHTCCEEECCCSBTHHHHHHHH-HHHTSEEECSSS-------------CCCHHHHHHHHHHH-TSH----HHHHHHH
T ss_pred HHHHcCCCEEEccCCCCcHHHHHHH-HHCCCccCCCCC-------------CCCHHHHHHHHHHh-hCH----HHHHHHH
Confidence 9999999999999999999999999 599999998754 58999999999999 877 8999999
Q ss_pred HHHHHHH
Q 037640 368 NLAKMAK 374 (398)
Q Consensus 368 ~l~~~~~ 374 (398)
++++.++
T Consensus 378 ~~~~~~~ 384 (416)
T 1rrv_A 378 AVAGMVL 384 (416)
T ss_dssp HHTTTCC
T ss_pred HHHHHHh
Confidence 9888765
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.97 E-value=1e-28 Score=242.50 Aligned_cols=300 Identities=14% Similarity=0.153 Sum_probs=207.0
Q ss_pred HHHHHHhchHHHHHHHhhcCCCCcEEEEC-CCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCcc
Q 037640 11 FFTAADKLLEPVENLFGQLKPQPNCIISD-VCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEYF 89 (398)
Q Consensus 11 l~~a~~~~~~~l~~~L~~~~~~~D~VI~D-~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
+......+...+.+.+++ .+||+||+| ....++..+|+++|||++.+.+...... .+...+. ..+.
T Consensus 99 ~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~-~~~~~~~----------~~~~ 165 (415)
T 3rsc_A 99 YLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE-HYSFSQD----------MVTL 165 (415)
T ss_dssp HHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS-SCCHHHH----------HHHH
T ss_pred HHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC-ccccccc----------cccc
Confidence 344445566788888888 899999999 7778999999999999998764321100 0000000 0000
Q ss_pred ccCCCCcccccccccccccCCcchHHHHHHHH----------hhhccC-cEEEEcChhhccHHHHHHHHhhcCCceeecC
Q 037640 90 SVPGLPDKIELTKKQVDSTQGQKFKAFEYKIG----------AATLAI-DGVIINSFEELEPAYVKEYKKISRDKAWCIG 158 (398)
Q Consensus 90 ~~pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~----------~~~~~~-~~~li~s~~~le~~~~~~~~~~~~~~v~~vG 158 (398)
..+..+.. .. .+...+.++. ...... +..++.....++. +...++.++.++|
T Consensus 166 ~~~~~p~~----------~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~vG 228 (415)
T 3rsc_A 166 AGTIDPLD----------LP--VFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQI-----AGDTFDDRFVFVG 228 (415)
T ss_dssp HTCCCGGG----------CH--HHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTST-----TGGGCCTTEEECC
T ss_pred cccCChhh----------HH--HHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCC-----CcccCCCceEEeC
Confidence 00000000 00 0000111110 111112 5566655555552 3455678899999
Q ss_pred cccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchh
Q 037640 159 PVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKE 238 (398)
Q Consensus 159 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 238 (398)
|+.... .+..+|....+++++|||++||......+.+..+++++++.+.+++|.++.......
T Consensus 229 p~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~ 291 (415)
T 3rsc_A 229 PCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDPAA 291 (415)
T ss_dssp CCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCGGG
T ss_pred CCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCChHH
Confidence 986432 223346554556779999999998777778889999999989999999886532211
Q ss_pred hhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcc
Q 037640 239 LKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKI 318 (398)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~ 318 (398)
+.. .+.|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||..||+++ ++.|+
T Consensus 292 l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l-~~~g~ 357 (415)
T 3rsc_A 292 LGD-----------LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRV-DQLGL 357 (415)
T ss_dssp GCC-----------CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHHTC
T ss_pred hcC-----------CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHH-HHcCC
Confidence 111 2468999999999999999888 999999999999999999999999999999999999 59999
Q ss_pred eEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 037640 319 GVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQ 392 (398)
Q Consensus 319 g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 392 (398)
|+.+..+ +++.++|.++|+++++|+ +++++++++++.+.. .++..+.++.+.+
T Consensus 358 g~~~~~~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 410 (415)
T 3rsc_A 358 GAVLPGE-------------KADGDTLLAAVGAVAADP----ALLARVEAMRGHVRR----AGGAARAADAVEA 410 (415)
T ss_dssp EEECCGG-------------GCCHHHHHHHHHHHHTCH----HHHHHHHHHHHHHHH----SCHHHHHHHHHHH
T ss_pred EEEcccC-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 9999765 589999999999999987 899999999888764 3343444444433
No 11
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.97 E-value=5.7e-29 Score=241.92 Aligned_cols=259 Identities=15% Similarity=0.125 Sum_probs=188.1
Q ss_pred hchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCccccCCCCc
Q 037640 17 KLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEYFSVPGLPD 96 (398)
Q Consensus 17 ~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ 96 (398)
.....+.+.+++ .+||+||+|.+..++..+|+.+|||++.+...+. .. .++..
T Consensus 94 ~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~----------------------~~---~~~~~ 146 (384)
T 2p6p_A 94 SSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAV----------------------DA---DGIHP 146 (384)
T ss_dssp HHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSC----------------------CC---TTTHH
T ss_pred HHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCc----------------------cc---chhhH
Confidence 345667777777 7999999999888999999999999998643210 00 00000
Q ss_pred ccccccccccccCCcchHHHHHHHHhhh-----ccCcEEEEcChhhccHHHHHHHHhhcC-CceeecCcccCCCcccchh
Q 037640 97 KIELTKKQVDSTQGQKFKAFEYKIGAAT-----LAIDGVIINSFEELEPAYVKEYKKISR-DKAWCIGPVSLSNKEYSDK 170 (398)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~li~s~~~le~~~~~~~~~~~~-~~v~~vGpl~~~~~~~~~~ 170 (398)
......+++.... ..++.+++++...++++ ..++ .++.++++ . .
T Consensus 147 ---------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~-~--~------ 196 (384)
T 2p6p_A 147 ---------------GADAELRPELSELGLERLPAPDLFIDICPPSLRPA------NAAPARMMRHVAT-S--R------ 196 (384)
T ss_dssp ---------------HHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------TSCCCEECCCCCC-C--C------
T ss_pred ---------------HHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------CCCCCCceEecCC-C--C------
Confidence 0001111111111 11467888888777632 1122 24444421 0 0
Q ss_pred hccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccC-----CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCc
Q 037640 171 AQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNL-----IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVE 245 (398)
Q Consensus 171 ~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~ 245 (398)
+.++.+|++..+++++|||++||.... ..+.+..+++++++.+.+++|+.++.. .
T Consensus 197 ----------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~----------~ 256 (384)
T 2p6p_A 197 ----------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTV----------A 256 (384)
T ss_dssp ----------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHH----------H
T ss_pred ----------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCC----------H
Confidence 133567887655667999999999875 446788899999999999999987421 1
Q ss_pred hhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccC
Q 037640 246 DGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVE 325 (398)
Q Consensus 246 ~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~ 325 (398)
+.+. . .++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||+++ ++.|+|+.+..+
T Consensus 257 ~~l~-~-~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~-~~~g~g~~~~~~ 330 (384)
T 2p6p_A 257 EALR-A-EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRV-ADYGAAIALLPG 330 (384)
T ss_dssp HHHH-H-HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTT
T ss_pred HhhC-C-CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHH-HHCCCeEecCcC
Confidence 1111 1 2578999 99999999987776 999999999999999999999999999999999999 599999998754
Q ss_pred CCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHH
Q 037640 326 NPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKM 375 (398)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 375 (398)
+++.++|.++|+++++|+ +++++++++++.++.
T Consensus 331 -------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 331 -------------EDSTEAIADSCQELQAKD----TYARRAQDLSREISG 363 (384)
T ss_dssp -------------CCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT
T ss_pred -------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 479999999999999987 899999999999874
No 12
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.96 E-value=4.2e-28 Score=239.31 Aligned_cols=289 Identities=17% Similarity=0.223 Sum_probs=195.6
Q ss_pred HHHHhchHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCccccC
Q 037640 13 TAADKLLEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEYFSVP 92 (398)
Q Consensus 13 ~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 92 (398)
..+..+...+.+++++ .+||+||+|.+..|+..+|+.+|||+|.+++...........+... .... ....+
T Consensus 87 ~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~ 157 (430)
T 2iyf_A 87 NDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEP-MWRE------PRQTE 157 (430)
T ss_dssp HHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHH-HHHH------HHHSH
T ss_pred HHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccc-hhhh------hccch
Confidence 3344556778888888 8999999998877899999999999999876532000000000000 0000 00000
Q ss_pred CCCcccccccccccccCCcchHHHHHH------HHhhhccCcEEEEcChhhccHHHHHHHHhhcCCc-eeecCcccCCCc
Q 037640 93 GLPDKIELTKKQVDSTQGQKFKAFEYK------IGAATLAIDGVIINSFEELEPAYVKEYKKISRDK-AWCIGPVSLSNK 165 (398)
Q Consensus 93 g~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~~~~li~s~~~le~~~~~~~~~~~~~~-v~~vGpl~~~~~ 165 (398)
++.. +. .....+..+ ..+.....+.+++++..++++. ...++++ +++|||++....
T Consensus 158 ~~~~----------~~--~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~v~~vG~~~~~~~ 220 (430)
T 2iyf_A 158 RGRA----------YY--ARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-----ADRVDEDVYTFVGACQGDRA 220 (430)
T ss_dssp HHHH----------HH--HHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----GGGSCTTTEEECCCCC----
T ss_pred HHHH----------HH--HHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----cccCCCccEEEeCCcCCCCC
Confidence 0000 00 000001100 0011124567889998887743 1346677 999998653211
Q ss_pred ccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccC
Q 037640 166 EYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVV 244 (398)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l 244 (398)
...+|.+..+++++||+++||......+.+.++++++++. +.+++|.++....... +
T Consensus 221 -----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~-----l 278 (430)
T 2iyf_A 221 -----------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAE-----L 278 (430)
T ss_dssp ------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CGGG-----G
T ss_pred -----------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHH-----h
Confidence 1124555445567999999999855567788899999885 8899998876532111 1
Q ss_pred chhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEecc
Q 037640 245 EDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~ 324 (398)
. . .+.|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|..+||..|++++ ++.|+|+.+..
T Consensus 279 ~-----~-~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~-~~~g~g~~~~~ 349 (430)
T 2iyf_A 279 G-----E-LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADML-QGLGVARKLAT 349 (430)
T ss_dssp C-----S-CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHTTSEEECCC
T ss_pred c-----c-CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHH-HHcCCEEEcCC
Confidence 0 0 1468999999999999999988 999999999999999999999999999999999999 59999999875
Q ss_pred CCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHH
Q 037640 325 ENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKM 375 (398)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 375 (398)
+ +++.++|.++|.++++|+ +++++++++++.++.
T Consensus 350 ~-------------~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 350 E-------------EATADLLRETALALVDDP----EVARRLRRIQAEMAQ 383 (430)
T ss_dssp C--------------CCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHH
T ss_pred C-------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHHh
Confidence 4 579999999999999887 788888888777664
No 13
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.96 E-value=3.9e-28 Score=236.90 Aligned_cols=309 Identities=15% Similarity=0.179 Sum_probs=203.9
Q ss_pred HHHHHHhchHHHHHHHhhcCCCCcEEEEC-CCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCcc
Q 037640 11 FFTAADKLLEPVENLFGQLKPQPNCIISD-VCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEYF 89 (398)
Q Consensus 11 l~~a~~~~~~~l~~~L~~~~~~~D~VI~D-~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
+........+.+.+.+++ .+||+||+| .+..++..+|+++|||+|.+.+....... +...+...... ..
T Consensus 83 ~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~~-------~~ 152 (402)
T 3ia7_A 83 YVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKELWKSN-------GQ 152 (402)
T ss_dssp HHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHHHHHH-------TC
T ss_pred HHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-ccccccccccc-------cc
Confidence 333344556778888888 899999999 77789999999999999987643211000 00000000000 00
Q ss_pred ccCCCCccccccccccc-ccCCcchHHHHHHHHhhhccC-cEEEEcChhhccHHHHHHHHhhcCCceeecCcccCCCccc
Q 037640 90 SVPGLPDKIELTKKQVD-STQGQKFKAFEYKIGAATLAI-DGVIINSFEELEPAYVKEYKKISRDKAWCIGPVSLSNKEY 167 (398)
Q Consensus 90 ~~pg~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~-~~~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~ 167 (398)
..|..... + ...+. +....+....... ..... +..++....+++. ....++.++.+|||+....
T Consensus 153 ~~~~~~~~--~-~~~~~~~~~~~g~~~~~~~---~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~vGp~~~~~--- 218 (402)
T 3ia7_A 153 RHPADVEA--V-HSVLVDLLGKYGVDTPVKE---YWDEIEGLTIVFLPKSFQP-----FAETFDERFAFVGPTLTGR--- 218 (402)
T ss_dssp CCGGGSHH--H-HHHHHHHHHTTTCCSCHHH---HHTCCCSCEEESSCGGGST-----TGGGCCTTEEECCCCCCC----
T ss_pred cChhhHHH--H-HHHHHHHHHHcCCCCChhh---hhcCCCCeEEEEcChHhCC-----ccccCCCCeEEeCCCCCCc---
Confidence 00000000 0 00000 0000000000001 11111 4455555454542 3445678899999986432
Q ss_pred chhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchh
Q 037640 168 SDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDG 247 (398)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~ 247 (398)
.+...|+...+++++||+++||......+.+..+++++++.+.+++|..+.......+..
T Consensus 219 --------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------ 278 (402)
T 3ia7_A 219 --------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGP------ 278 (402)
T ss_dssp -----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCS------
T ss_pred --------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCC------
Confidence 122345554556679999999998877778889999999889999999886532211111
Q ss_pred HHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeeccc-ccchhhhHHHHHHHhcceEEeccCC
Q 037640 248 FEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPL-FADQFTNEKLAVHLLKIGVKIGVEN 326 (398)
Q Consensus 248 ~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~v~~~~g~g~~l~~~~ 326 (398)
...|+.+.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|. ..||..||+++ ++.|+|..+..+
T Consensus 279 -----~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~-~~~g~g~~~~~~- 349 (402)
T 3ia7_A 279 -----LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERV-IELGLGSVLRPD- 349 (402)
T ss_dssp -----CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHH-HHTTSEEECCGG-
T ss_pred -----CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHH-HHcCCEEEccCC-
Confidence 2478999999999999999888 9999999999999999999999999 99999999999 599999999765
Q ss_pred CCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 037640 327 PMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQ 392 (398)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 392 (398)
+++.++|.++|+++++|+ +++++++++++.+.. +++..+.++.+.+
T Consensus 350 ------------~~~~~~l~~~~~~ll~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 395 (402)
T 3ia7_A 350 ------------QLEPASIREAVERLAADS----AVRERVRRMQRDILS----SGGPARAADEVEA 395 (402)
T ss_dssp ------------GCSHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT----SCHHHHHHHHHHH
T ss_pred ------------CCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHhh----CChHHHHHHHHHH
Confidence 589999999999999987 889999888888652 3444444444433
No 14
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.96 E-value=2.3e-28 Score=239.69 Aligned_cols=190 Identities=16% Similarity=0.095 Sum_probs=154.4
Q ss_pred EEEcChhhccHHHHHHHHhhcCCceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCH
Q 037640 130 VIINSFEELEPAYVKEYKKISRDKAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIP 209 (398)
Q Consensus 130 ~li~s~~~le~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~ 209 (398)
.+.+..+.+.+. +.++++++++|+++.+... ..++++.+|++.. +++|||+|||+.. ..
T Consensus 177 ~l~~~~~~l~p~------~~~~~~~~~~G~~~~~~~~------------~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~ 235 (404)
T 3h4t_A 177 PWLAADPVLSPL------RPTDLGTVQTGAWILPDQR------------PLSAELEGFLRAG--SPPVYVGFGSGPA-PA 235 (404)
T ss_dssp CEECSCTTTSCC------CTTCCSCCBCCCCCCCCCC------------CCCHHHHHHHHTS--SCCEEECCTTSCC-CT
T ss_pred eEEeeCcceeCC------CCCCCCeEEeCccccCCCC------------CCCHHHHHHHhcC--CCeEEEECCCCCC-cH
Confidence 345555555532 3466789999988654321 1357788899853 4589999999987 66
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHH
Q 037640 210 SQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEG 289 (398)
Q Consensus 210 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~ea 289 (398)
+.+..+++++++.++++||+.++.... ... ..+|+.+.+|+||.++|.++++ ||||||+||++||
T Consensus 236 ~~~~~~~~al~~~~~~vv~~~g~~~~~-------~~~------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Ea 300 (404)
T 3h4t_A 236 EAARVAIEAVRAQGRRVVLSSGWAGLG-------RID------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAV 300 (404)
T ss_dssp THHHHHHHHHHHTTCCEEEECTTTTCC-------CSS------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCcccc-------ccc------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHH
Confidence 678889999999999999998765321 110 1478999999999999987777 9999999999999
Q ss_pred HHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 290 VCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 290 l~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
+++|||+|++|+.+||+.||+++ ++.|+|+.+... +++.++|.++|+++++ + +|+++++++
T Consensus 301 l~~GvP~v~~p~~~dQ~~na~~~-~~~G~g~~l~~~-------------~~~~~~l~~ai~~ll~-~----~~~~~~~~~ 361 (404)
T 3h4t_A 301 TRAGAPQVVVPQKADQPYYAGRV-ADLGVGVAHDGP-------------TPTVESLSAALATALT-P----GIRARAAAV 361 (404)
T ss_dssp HHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECSSS-------------SCCHHHHHHHHHHHTS-H----HHHHHHHHH
T ss_pred HHcCCCEEEcCCcccHHHHHHHH-HHCCCEeccCcC-------------CCCHHHHHHHHHHHhC-H----HHHHHHHHH
Confidence 99999999999999999999999 599999999765 5899999999999997 6 899999999
Q ss_pred HHHHH
Q 037640 370 AKMAK 374 (398)
Q Consensus 370 ~~~~~ 374 (398)
++.++
T Consensus 362 ~~~~~ 366 (404)
T 3h4t_A 362 AGTIR 366 (404)
T ss_dssp HTTCC
T ss_pred HHHHh
Confidence 88764
No 15
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.96 E-value=7.6e-28 Score=238.59 Aligned_cols=162 Identities=16% Similarity=0.163 Sum_probs=130.2
Q ss_pred hhhhhhhcCCCCCceEEEeeCCcccC---CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeE
Q 037640 182 HKCLKWLDSKDPKSVVYACLGSMCNL---IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLV 258 (398)
Q Consensus 182 ~~~~~~l~~~~~~~vv~vs~Gs~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~ 258 (398)
.++.+|++..+++++|||++||+... ..+.+..+++++++.++++||+.++.... . +. ..+.|+.
T Consensus 255 ~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-~-----l~------~~~~~v~ 322 (441)
T 2yjn_A 255 SVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE-G-----VA------NIPDNVR 322 (441)
T ss_dssp CCCCGGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTS-S-----CS------SCCSSEE
T ss_pred cccchHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh-h-----hc------cCCCCEE
Confidence 34667988666677999999999864 23456678999998899999998754211 0 11 0146899
Q ss_pred EeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccc
Q 037640 259 IWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGV 338 (398)
Q Consensus 259 ~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~ 338 (398)
+.+|+||.++|+++++ ||||||+||++||+++|||+|++|+..||..||+++ ++.|+|+.+...
T Consensus 323 ~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~------------- 386 (441)
T 2yjn_A 323 TVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVP------------- 386 (441)
T ss_dssp ECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTT-------------
T ss_pred EecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccc-------------
Confidence 9999999999977776 999999999999999999999999999999999999 599999998764
Q ss_pred cccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHH
Q 037640 339 LVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKM 375 (398)
Q Consensus 339 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~ 375 (398)
+++.++|.++|+++++|+ +++++++++++.++.
T Consensus 387 ~~~~~~l~~~i~~ll~~~----~~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 387 ELTPDQLRESVKRVLDDP----AHRAGAARMRDDMLA 419 (441)
T ss_dssp TCCHHHHHHHHHHHHHCH----HHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHhcCH----HHHHHHHHHHHHHHc
Confidence 589999999999999987 899999999988763
No 16
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=205.17 Aligned_cols=162 Identities=23% Similarity=0.438 Sum_probs=138.6
Q ss_pred ChhhhhhhhcCCCCCceEEEeeCCccc-CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeE
Q 037640 180 DEHKCLKWLDSKDPKSVVYACLGSMCN-LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLV 258 (398)
Q Consensus 180 ~~~~~~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~ 258 (398)
.++++.+|++..+++++|||++||... ...+.+..+++++++.+.+++|+.++.... . + +.|+.
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~----~--~---------~~~v~ 71 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPD----T--L---------GLNTR 71 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCT----T--C---------CTTEE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcc----c--C---------CCcEE
Confidence 468899999877667799999999974 456778889999998899999998764210 0 2 36899
Q ss_pred EeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccc
Q 037640 259 IWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGV 338 (398)
Q Consensus 259 ~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~ 338 (398)
+.+|+||.+++.|+++++||||||+||++||+++|+|+|++|...||..||+++ ++.|+|+.+...
T Consensus 72 ~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~------------- 137 (170)
T 2o6l_A 72 LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFN------------- 137 (170)
T ss_dssp EESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTT-------------
T ss_pred EecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccc-------------
Confidence 999999999998888888999999999999999999999999999999999999 599999998764
Q ss_pred cccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Q 037640 339 LVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAK 374 (398)
Q Consensus 339 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 374 (398)
+++.++|.++|.++++|+ +|+++++++++.++
T Consensus 138 ~~~~~~l~~~i~~ll~~~----~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 138 TMSSTDLLNALKRVINDP----SYKENVMKLSRIQH 169 (170)
T ss_dssp TCCHHHHHHHHHHHHHCH----HHHHHHHHHC----
T ss_pred cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHhh
Confidence 589999999999999887 89999999998876
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.93 E-value=1.9e-25 Score=218.22 Aligned_cols=160 Identities=19% Similarity=0.255 Sum_probs=121.3
Q ss_pred hhhhhhcCCCCCceEEEeeCCcccC--------CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcC
Q 037640 183 KCLKWLDSKDPKSVVYACLGSMCNL--------IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKG 254 (398)
Q Consensus 183 ~~~~~l~~~~~~~vv~vs~Gs~~~~--------~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~ 254 (398)
++..|+...+++++||+++||.... ..+.+..+++++++.+.+++|+.++... .. +. ..+
T Consensus 216 ~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~-~~-----l~------~~~ 283 (398)
T 4fzr_A 216 QVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLA-QT-----LQ------PLP 283 (398)
T ss_dssp CCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC--------------------CC
T ss_pred CCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcch-hh-----hc------cCC
Confidence 3456766555667999999999753 2345778999999889999998876421 11 11 125
Q ss_pred CCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccc
Q 037640 255 RGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQ 334 (398)
Q Consensus 255 ~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~ 334 (398)
+|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|+.++ ++.|+|+.+...
T Consensus 284 ~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~--------- 351 (398)
T 4fzr_A 284 EGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL-HAAGAGVEVPWE--------- 351 (398)
T ss_dssp TTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHTTSEEECC-----------
T ss_pred CcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCcc---------
Confidence 79999999999999999888 999999999999999999999999999999999999 599999999765
Q ss_pred cccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Q 037640 335 NIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAK 374 (398)
Q Consensus 335 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 374 (398)
+++.++|.++|.++++|+ ++++++++.++.++
T Consensus 352 ----~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 383 (398)
T 4fzr_A 352 ----QAGVESVLAACARIRDDS----SYVGNARRLAAEMA 383 (398)
T ss_dssp ---------CHHHHHHHHHHCT----HHHHHHHHHHHHHT
T ss_pred ----cCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHH
Confidence 578999999999999998 89999988888865
No 18
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.92 E-value=4.3e-24 Score=208.62 Aligned_cols=156 Identities=17% Similarity=0.198 Sum_probs=129.5
Q ss_pred hhhhhhcCCCCCceEEEeeCCcccC--CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEe
Q 037640 183 KCLKWLDSKDPKSVVYACLGSMCNL--IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIW 260 (398)
Q Consensus 183 ~~~~~l~~~~~~~vv~vs~Gs~~~~--~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 260 (398)
...+|+...+++++||+++||.... ..+.+..+++++++.+.+++|+.++... ..+.. .++|+.+.
T Consensus 221 ~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~-~~l~~-----------~~~~v~~~ 288 (398)
T 3oti_A 221 VLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDI-SPLGT-----------LPRNVRAV 288 (398)
T ss_dssp ECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCC-GGGCS-----------CCTTEEEE
T ss_pred CCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcCh-hhhcc-----------CCCcEEEE
Confidence 3456776555677999999999653 4566788999999999999999876531 11111 14789999
Q ss_pred ecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhH--HHHHHHhcceEEeccCCCCCccccccccc
Q 037640 261 DWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNE--KLAVHLLKIGVKIGVENPMTWGEEQNIGV 338 (398)
Q Consensus 261 ~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na--~~v~~~~g~g~~l~~~~~~~~~~~~~~~~ 338 (398)
+|+|+.++|+++++ ||||||.||++||+++|+|+|++|+..||..|+ .++ ++.|+|+.+...
T Consensus 289 ~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~~~------------- 352 (398)
T 3oti_A 289 GWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV-SRRGIGLVSTSD------------- 352 (398)
T ss_dssp SSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH-HHHTSEEECCGG-------------
T ss_pred ccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH-HHCCCEEeeCCC-------------
Confidence 99999999999887 999999999999999999999999999999999 999 599999999765
Q ss_pred cccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Q 037640 339 LVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAK 374 (398)
Q Consensus 339 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 374 (398)
+.+.+.|. ++++|+ +++++++++++.+.
T Consensus 353 ~~~~~~l~----~ll~~~----~~~~~~~~~~~~~~ 380 (398)
T 3oti_A 353 KVDADLLR----RLIGDE----SLRTAAREVREEMV 380 (398)
T ss_dssp GCCHHHHH----HHHHCH----HHHHHHHHHHHHHH
T ss_pred CCCHHHHH----HHHcCH----HHHHHHHHHHHHHH
Confidence 46777777 788887 89999999988876
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.92 E-value=9.2e-24 Score=205.50 Aligned_cols=158 Identities=13% Similarity=0.180 Sum_probs=130.4
Q ss_pred hhhhhcCCCCCceEEEeeCCccc--CC-HHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEE
Q 037640 184 CLKWLDSKDPKSVVYACLGSMCN--LI-PSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVI 259 (398)
Q Consensus 184 ~~~~l~~~~~~~vv~vs~Gs~~~--~~-~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~ 259 (398)
...|+...+++++||+++||... .. .+.+..++++ ++. +.+++|..++... .. +. ....|+.+
T Consensus 208 ~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~-~~-----l~------~~~~~v~~ 274 (391)
T 3tsa_A 208 FPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHR-AL-----LT------DLPDNARI 274 (391)
T ss_dssp CCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGG-GG-----CT------TCCTTEEE
T ss_pred CCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcch-hh-----cc------cCCCCEEE
Confidence 44677665567799999999854 23 6667788888 877 7899998775421 11 21 02478999
Q ss_pred eecCchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEecc--CCCCCcccccccc
Q 037640 260 WDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGV--ENPMTWGEEQNIG 337 (398)
Q Consensus 260 ~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~--~~~~~~~~~~~~~ 337 (398)
.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|+.++ ++.|+|+.+.. .
T Consensus 275 ~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~------------ 339 (391)
T 3tsa_A 275 AESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNL-AAAGAGICLPDEQA------------ 339 (391)
T ss_dssp CCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH-HHTTSEEECCSHHH------------
T ss_pred eccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHH-HHcCCEEecCcccc------------
Confidence 999999999977777 999999999999999999999999999999999999 59999999976 4
Q ss_pred ccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Q 037640 338 VLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAK 374 (398)
Q Consensus 338 ~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 374 (398)
+.+.+.|.++|.++++|+ +++++++++++.+.
T Consensus 340 -~~~~~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 371 (391)
T 3tsa_A 340 -QSDHEQFTDSIATVLGDT----GFAAAAIKLSDEIT 371 (391)
T ss_dssp -HTCHHHHHHHHHHHHTCT----HHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHcCH----HHHHHHHHHHHHHH
Confidence 478999999999999998 88888888888765
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.90 E-value=4.1e-22 Score=194.96 Aligned_cols=160 Identities=21% Similarity=0.310 Sum_probs=132.3
Q ss_pred hhhh-hcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeec
Q 037640 184 CLKW-LDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDW 262 (398)
Q Consensus 184 ~~~~-l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 262 (398)
..+| ....+++++|++++||......+.+.++++++++.+.+++|..+....... +.. ..+|+.+.+|
T Consensus 231 ~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~-----l~~------~~~~v~~~~~ 299 (412)
T 3otg_A 231 LPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSG-----LGE------VPANVRLESW 299 (412)
T ss_dssp CCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTT-----CCC------CCTTEEEESC
T ss_pred CCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhh-----hcc------CCCcEEEeCC
Confidence 3445 232345669999999997656778889999999889999999876542111 110 1468999999
Q ss_pred CchhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccH
Q 037640 263 APQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKR 342 (398)
Q Consensus 263 ~pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~ 342 (398)
+|+.++|+++++ ||+|||+||++||+++|+|+|++|...||..|+..+ ++.|+|..+... +++.
T Consensus 300 ~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~~-------------~~~~ 363 (412)
T 3otg_A 300 VPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAV-AQAGAGDHLLPD-------------NISP 363 (412)
T ss_dssp CCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECCGG-------------GCCH
T ss_pred CCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCcc-------------cCCH
Confidence 999999999888 999999999999999999999999999999999999 599999999765 5799
Q ss_pred HHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Q 037640 343 DDVKNAVERLMDEGNDGEERRNRALNLAKMAK 374 (398)
Q Consensus 343 ~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 374 (398)
++|.++|.++++|+ ++++++.+.++.+.
T Consensus 364 ~~l~~ai~~ll~~~----~~~~~~~~~~~~~~ 391 (412)
T 3otg_A 364 DSVSGAAKRLLAEE----SYRAGARAVAAEIA 391 (412)
T ss_dssp HHHHHHHHHHHHCH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCH----HHHHHHHHHHHHHh
Confidence 99999999999988 77777777777765
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.81 E-value=7e-19 Score=169.86 Aligned_cols=150 Identities=13% Similarity=0.072 Sum_probs=113.5
Q ss_pred CCCceEEEeeCCcccCCHHHHHHHHHHHHhC----CCCEEEEEeCCCCchhhhhccCchhHHHHh--cCCCeEEeecCch
Q 037640 192 DPKSVVYACLGSMCNLIPSQMMELGLGLEAS----NRPFIWVIREGETSKELKKWVVEDGFEERI--KGRGLVIWDWAPQ 265 (398)
Q Consensus 192 ~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~v~~~~~~pq 265 (398)
+++++|+|..||.+..... ..+.+++... +..++|..|... .+...+.. .+.++.+.+|+++
T Consensus 178 ~~~~~ilv~gGs~g~~~~~--~~~~~al~~l~~~~~~~vi~~~G~~~----------~~~~~~~~~~~~~~~~v~~f~~d 245 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEPLN--KLLPEALAQVPLEIRPAIRHQAGRQH----------AEITAERYRTVAVEADVAPFISD 245 (365)
T ss_dssp TSCCEEEECCTTTTCSHHH--HHHHHHHHTSCTTTCCEEEEECCTTT----------HHHHHHHHHHTTCCCEEESCCSC
T ss_pred CCCcEEEEECCcCCccccc--hhhHHHHHhcccccceEEEEecCccc----------cccccceecccccccccccchhh
Confidence 3456899999998864332 2345555543 456777776542 11222222 2567888899998
Q ss_pred h-hhhcCCCcceeeecCCchhHHHHHHhCCCEeecccc----cchhhhHHHHHHHhcceEEeccCCCCCccccccccccc
Q 037640 266 V-LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLF----ADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLV 340 (398)
Q Consensus 266 ~-~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~ 340 (398)
. ++|+.+++ +|||+|.+|+.|++++|+|+|.+|+. .+|..||+.++ +.|+|+.+..+ ++
T Consensus 246 m~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~-~~G~a~~l~~~-------------~~ 309 (365)
T 3s2u_A 246 MAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLV-RSGAGRLLPQK-------------ST 309 (365)
T ss_dssp HHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHH-TTTSEEECCTT-------------TC
T ss_pred hhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHH-HCCCEEEeecC-------------CC
Confidence 6 69999988 99999999999999999999999974 58999999995 99999999765 58
Q ss_pred cHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 341 KRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 341 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
++++|.++|.++++|++..+.|+++++++
T Consensus 310 ~~~~L~~~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 310 GAAELAAQLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp CHHHHHHHHHHHHHCTHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCHHHHHHHHHHHHhc
Confidence 99999999999999996666666666654
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.57 E-value=7.2e-15 Score=130.67 Aligned_cols=120 Identities=13% Similarity=0.105 Sum_probs=87.9
Q ss_pred CCCceEEEeeCCcccCCHHHHHH-----HHHHHHhCC-CCEEEEEeCCCCchhhhhccCchhHHHHh-------------
Q 037640 192 DPKSVVYACLGSMCNLIPSQMME-----LGLGLEASN-RPFIWVIREGETSKELKKWVVEDGFEERI------------- 252 (398)
Q Consensus 192 ~~~~vv~vs~Gs~~~~~~~~~~~-----~~~al~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~~~------------- 252 (398)
+++++|||+.||.... .+.+.. ++++|.+.+ .++++++|..... ..+.+....
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~~ 97 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPIDQ 97 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSCT
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhcccccccccccc
Confidence 4567899999998432 223333 348888877 7999999876420 111111111
Q ss_pred --------------cCCCeEEeecCchh-hhhc-CCCcceeeecCCchhHHHHHHhCCCEeecccc----cchhhhHHHH
Q 037640 253 --------------KGRGLVIWDWAPQV-LILS-HPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLF----ADQFTNEKLA 312 (398)
Q Consensus 253 --------------~~~~v~~~~~~pq~-~~L~-~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v 312 (398)
..-++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 98 FGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp TCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 01245677888887 7898 8888 99999999999999999999999984 4799999999
Q ss_pred HHHhcceEEe
Q 037640 313 VHLLKIGVKI 322 (398)
Q Consensus 313 ~~~~g~g~~l 322 (398)
+ +.|+|+.+
T Consensus 176 ~-~~G~~~~~ 184 (224)
T 2jzc_A 176 V-ELGYVWSC 184 (224)
T ss_dssp H-HHSCCCEE
T ss_pred H-HCCCEEEc
Confidence 5 99998755
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.45 E-value=2.9e-12 Score=122.62 Aligned_cols=147 Identities=16% Similarity=0.046 Sum_probs=103.7
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHhC--CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCch-hhhh
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEAS--NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQ-VLIL 269 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq-~~~L 269 (398)
++++|++..|+... ......++++++.. +.++++..|.... .. +.+ ...+..-.++.+.+|+++ ..++
T Consensus 182 ~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~-~~-----l~~-~~~~~~~~~v~~~g~~~~~~~~~ 252 (364)
T 1f0k_A 182 GPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQ-QS-----VEQ-AYAEAGQPQHKVTEFIDDMAAAY 252 (364)
T ss_dssp SSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCH-HH-----HHH-HHHHTTCTTSEEESCCSCHHHHH
T ss_pred CCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchH-HH-----HHH-HHhhcCCCceEEecchhhHHHHH
Confidence 34577777888754 22334455665543 5666777766531 11 111 111122257999999954 5789
Q ss_pred cCCCcceeeecCCchhHHHHHHhCCCEeecccc---cchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHH
Q 037640 270 SHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLF---ADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVK 346 (398)
Q Consensus 270 ~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 346 (398)
+.+++ ||+++|.++++||+++|+|+|+.|.. .||..|++.+. +.|.|..+... +.+.++|.
T Consensus 253 ~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~-~~g~g~~~~~~-------------d~~~~~la 316 (364)
T 1f0k_A 253 AWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE-KAGAAKIIEQP-------------QLSVDAVA 316 (364)
T ss_dssp HHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH-HTTSEEECCGG-------------GCCHHHHH
T ss_pred HhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHH-hCCcEEEeccc-------------cCCHHHHH
Confidence 88888 99999999999999999999999987 79999999995 89999988754 46799999
Q ss_pred HHHHHHhccCcchHHHHHHH
Q 037640 347 NAVERLMDEGNDGEERRNRA 366 (398)
Q Consensus 347 ~ai~~vl~~~~~~~~~~~~a 366 (398)
++|.++ |++..+.+.+++
T Consensus 317 ~~i~~l--~~~~~~~~~~~~ 334 (364)
T 1f0k_A 317 NTLAGW--SRETLLTMAERA 334 (364)
T ss_dssp HHHHTC--CHHHHHHHHHHH
T ss_pred HHHHhc--CHHHHHHHHHHH
Confidence 999988 664444444444
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.04 E-value=1.2e-09 Score=100.81 Aligned_cols=116 Identities=6% Similarity=0.015 Sum_probs=89.3
Q ss_pred CceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHh-cCCCeEEeecCchh-hhhcC
Q 037640 194 KSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERI-KGRGLVIWDWAPQV-LILSH 271 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~pq~-~~L~~ 271 (398)
.+.|+|++|...... ....++++|.... ++.++.+.+.. ..+.+.+.. ..+|+.+..|++++ ++++.
T Consensus 157 ~~~ILv~~GG~d~~~--l~~~vl~~L~~~~-~i~vv~G~~~~--------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~ 225 (282)
T 3hbm_A 157 KYDFFICMGGTDIKN--LSLQIASELPKTK-IISIATSSSNP--------NLKKLQKFAKLHNNIRLFIDHENIAKLMNE 225 (282)
T ss_dssp CEEEEEECCSCCTTC--HHHHHHHHSCTTS-CEEEEECTTCT--------THHHHHHHHHTCSSEEEEESCSCHHHHHHT
T ss_pred CCeEEEEECCCchhh--HHHHHHHHhhcCC-CEEEEECCCch--------HHHHHHHHHhhCCCEEEEeCHHHHHHHHHH
Confidence 457999998765433 4456778876644 56667766532 223333332 23589999999988 58888
Q ss_pred CCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEecc
Q 037640 272 PSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 272 ~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~ 324 (398)
+++ +||+|| +|++|+++.|+|+|.+|+..+|..||+.+ ++.|+++.+..
T Consensus 226 aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~ 274 (282)
T 3hbm_A 226 SNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKY 274 (282)
T ss_dssp EEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGG
T ss_pred CCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcch
Confidence 888 999999 89999999999999999999999999999 49999998865
No 25
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.81 E-value=6.3e-08 Score=94.00 Aligned_cols=131 Identities=13% Similarity=0.159 Sum_probs=81.2
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEeCCCCchhhhhccCchhHHHHh-cCCCeEEeecCc--
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEA-----SNRPFIWVIREGETSKELKKWVVEDGFEERI-KGRGLVIWDWAP-- 264 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~p-- 264 (398)
++++|+++.+-...... .+..+++|++. .+.++|+..+.+.. +-+.+.+.. ...++.+.++++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~--------~~~~l~~~~~~~~~v~~~~~lg~~ 299 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNPN--------VREPVNKLLKGVSNIVLIEPQQYL 299 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCHH--------HHHHHHHHTTTCTTEEEECCCCHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCChH--------HHHHHHHHHcCCCCEEEeCCCCHH
Confidence 34577776532222222 24456666553 35667766553311 111222211 246888877775
Q ss_pred -hhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 265 -QVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 265 -q~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
...+++.+++ ||+-.| |.+.||.++|+|+|+..-..++. .++ +.|.++.+. .+.+
T Consensus 300 ~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v-~~G~~~lv~----------------~d~~ 355 (396)
T 3dzc_A 300 PFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAV-AAGTVKLVG----------------TNQQ 355 (396)
T ss_dssp HHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHH-HHTSEEECT----------------TCHH
T ss_pred HHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHH-HcCceEEcC----------------CCHH
Confidence 3467888888 999988 66679999999999975444432 233 567775442 2689
Q ss_pred HHHHHHHHHhccC
Q 037640 344 DVKNAVERLMDEG 356 (398)
Q Consensus 344 ~l~~ai~~vl~~~ 356 (398)
+|.+++.++++|+
T Consensus 356 ~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 356 QICDALSLLLTDP 368 (396)
T ss_dssp HHHHHHHHHHHCH
T ss_pred HHHHHHHHHHcCH
Confidence 9999999999877
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.79 E-value=3.8e-06 Score=80.37 Aligned_cols=262 Identities=10% Similarity=0.020 Sum_probs=141.9
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCccccCCCCc
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEYFSVPGLPD 96 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ 96 (398)
...+.+++++ .+||+|++....+ +...+++.+++|.+++...+.... .. ..
T Consensus 75 ~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-----------------------~~--~~ 127 (394)
T 3okp_A 75 AHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG-----------------------WS--ML 127 (394)
T ss_dssp HHHHHHHHHH--TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH-----------------------HT--TS
T ss_pred HHHHHHHHHh--cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh-----------------------hh--hc
Confidence 4567778888 8999999865443 455568889999554322211000 00 00
Q ss_pred ccccccccccccCCcchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHhhc--CCceeecCcccCCCcccchhhccC
Q 037640 97 KIELTKKQVDSTQGQKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKKIS--RDKAWCIGPVSLSNKEYSDKAQRG 174 (398)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~~~--~~~v~~vGpl~~~~~~~~~~~~~~ 174 (398)
....... ....+.++.+++.|-...+ .+.... ..++..|..-+....-...
T Consensus 128 --------------~~~~~~~---~~~~~~~d~ii~~s~~~~~-----~~~~~~~~~~~~~vi~ngv~~~~~~~~----- 180 (394)
T 3okp_A 128 --------------PGSRQSL---RKIGTEVDVLTYISQYTLR-----RFKSAFGSHPTFEHLPSGVDVKRFTPA----- 180 (394)
T ss_dssp --------------HHHHHHH---HHHHHHCSEEEESCHHHHH-----HHHHHHCSSSEEEECCCCBCTTTSCCC-----
T ss_pred --------------chhhHHH---HHHHHhCCEEEEcCHHHHH-----HHHHhcCCCCCeEEecCCcCHHHcCCC-----
Confidence 0011111 2234667888887755332 222222 2466666543321110000
Q ss_pred CCCCCChhhhhhhhcCCCCCceEEEeeCCccc-CCHHHHHHHHHHHHh--CCCCEEEEEeCCCCchhhhhccCchhHHHH
Q 037640 175 NTSSLDEHKCLKWLDSKDPKSVVYACLGSMCN-LIPSQMMELGLGLEA--SNRPFIWVIREGETSKELKKWVVEDGFEER 251 (398)
Q Consensus 175 ~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~ 251 (398)
.......+.+-+... ++..+++..|+... ...+.+.+.+..+.+ .+.++++ +|.... .+.+.+.
T Consensus 181 --~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~~---------~~~l~~~ 247 (394)
T 3okp_A 181 --TPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLI-VGSGRY---------ESTLRRL 247 (394)
T ss_dssp --CHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEE-ECCCTT---------HHHHHHH
T ss_pred --CchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEE-EcCchH---------HHHHHHH
Confidence 000012233333322 22256677788654 234444444444433 2455554 443321 1222222
Q ss_pred hc--CCCeEEeecCchhh---hhcCCCcceeee-----------cCCchhHHHHHHhCCCEeecccccchhhhHHHHHHH
Q 037640 252 IK--GRGLVIWDWAPQVL---ILSHPSVGGFLT-----------HCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHL 315 (398)
Q Consensus 252 ~~--~~~v~~~~~~pq~~---~L~~~~~~~~it-----------hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 315 (398)
.. ..++.+.+|+|+.+ ++..+++ +|. -|.-++++||+++|+|+|+.+..+ ....+ +.
T Consensus 248 ~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i-~~ 320 (394)
T 3okp_A 248 ATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETV-TP 320 (394)
T ss_dssp TGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGC-CT
T ss_pred HhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHH-hc
Confidence 11 36899999997654 6778887 654 444579999999999999977532 22233 22
Q ss_pred hcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 037640 316 LKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 316 ~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
|.|..+... +.+++.++|.++++|++..+.+.+++++..
T Consensus 321 -~~g~~~~~~---------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~ 359 (394)
T 3okp_A 321 -ATGLVVEGS---------------DVDKLSELLIELLDDPIRRAAMGAAGRAHV 359 (394)
T ss_dssp -TTEEECCTT---------------CHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred -CCceEeCCC---------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 367777543 789999999999998766666666665543
No 27
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.76 E-value=2.3e-07 Score=89.67 Aligned_cols=258 Identities=16% Similarity=0.114 Sum_probs=142.5
Q ss_pred HHHHHhchHHHHHHHhhcCCCCcEEEE--CCCcccHHHHHHHcCCCeEEEechhHHHHHHHHHhhhhcccccccCCCCcc
Q 037640 12 FTAADKLLEPVENLFGQLKPQPNCIIS--DVCLPYTAQIAGKFNVPRIAFHGTCCFSVVCFNNIFASKFLESISSESEYF 89 (398)
Q Consensus 12 ~~a~~~~~~~l~~~L~~~~~~~D~VI~--D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
.+.+..+...+.++|++ .+||+||+ |....++..+|.++|||.+.+... ..+
T Consensus 76 ~~~~~~~~~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag------------------------lrs 129 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG------------------------NRC 129 (385)
T ss_dssp HHHHHHHHHHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC------------------------CCC
T ss_pred HHHHHHHHHHHHHHHHh--cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC------------------------Ccc
Confidence 44555667788889988 89999877 334445577889999997754211 000
Q ss_pred ccCCCCcccccccccccccCCcchHHHHHHHHhhhccCcEEEEcChhhccHHHHHHHHh-hcC-CceeecC-cccCCCcc
Q 037640 90 SVPGLPDKIELTKKQVDSTQGQKFKAFEYKIGAATLAIDGVIINSFEELEPAYVKEYKK-ISR-DKAWCIG-PVSLSNKE 166 (398)
Q Consensus 90 ~~pg~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~li~s~~~le~~~~~~~~~-~~~-~~v~~vG-pl~~~~~~ 166 (398)
+--.+|. ...+.... +-++.+++.+-..-+ .+.+ -.+ .+++.+| |.......
T Consensus 130 ~~~~~pe------------------e~nR~~~~--~~a~~~~~~te~~~~-----~l~~~G~~~~~I~vtGnp~~D~~~~ 184 (385)
T 4hwg_A 130 FDQRVPE------------------EINRKIID--HISDVNITLTEHARR-----YLIAEGLPAELTFKSGSHMPEVLDR 184 (385)
T ss_dssp SCTTSTH------------------HHHHHHHH--HHCSEEEESSHHHHH-----HHHHTTCCGGGEEECCCSHHHHHHH
T ss_pred ccccCcH------------------HHHHHHHH--hhhceeecCCHHHHH-----HHHHcCCCcCcEEEECCchHHHHHH
Confidence 0000111 11222211 224556665543222 1211 122 3688898 33211100
Q ss_pred cchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCC-HHHHHHHHHHHHhC----CCCEEEEEeCCCCchhhhh
Q 037640 167 YSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLI-PSQMMELGLGLEAS----NRPFIWVIREGETSKELKK 241 (398)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~ 241 (398)
..... ..+++.+-+.-. ++++|+++.|...... .+.+..+++|+... +.++|+..++.
T Consensus 185 ~~~~~--------~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~-------- 247 (385)
T 4hwg_A 185 FMPKI--------LKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR-------- 247 (385)
T ss_dssp HHHHH--------HHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH--------
T ss_pred hhhhc--------chhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH--------
Confidence 00000 012222333322 2458889888765433 24556677776642 56778765422
Q ss_pred ccCchhHHHH---hc-CCCeEEeecCch---hhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHH
Q 037640 242 WVVEDGFEER---IK-GRGLVIWDWAPQ---VLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVH 314 (398)
Q Consensus 242 ~~l~~~~~~~---~~-~~~v~~~~~~pq---~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~ 314 (398)
+.+.+.+. .. .+++.+.+.+++ ..+++++++ +||-.|. .+.||.+.|+|+|.++-..+.+ ++ +
T Consensus 248 --~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~-e~--v-- 317 (385)
T 4hwg_A 248 --TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERP-EG--M-- 317 (385)
T ss_dssp --HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCT-HH--H--
T ss_pred --HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccch-hh--h--
Confidence 11111111 11 357887666654 468888888 9999886 4799999999999997644311 12 3
Q ss_pred HhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHH
Q 037640 315 LLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERR 363 (398)
Q Consensus 315 ~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~ 363 (398)
+.|.++.+. .+.++|.+++.++++|+...+.++
T Consensus 318 ~~G~~~lv~----------------~d~~~i~~ai~~ll~d~~~~~~m~ 350 (385)
T 4hwg_A 318 DAGTLIMSG----------------FKAERVLQAVKTITEEHDNNKRTQ 350 (385)
T ss_dssp HHTCCEECC----------------SSHHHHHHHHHHHHTTCBTTBCCS
T ss_pred hcCceEEcC----------------CCHHHHHHHHHHHHhChHHHHHhh
Confidence 568776552 378999999999998875544443
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.75 E-value=2.4e-07 Score=88.67 Aligned_cols=129 Identities=16% Similarity=0.224 Sum_probs=82.4
Q ss_pred CceEEEeeCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCch--
Q 037640 194 KSVVYACLGSMCNLIPSQMMELGLGLEA-----SNRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQ-- 265 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq-- 265 (398)
+++|+++.|...... .+..+++|++. .+..+++..+.+.. +-+.+.+... .+++.+.+++++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~--------~~~~l~~~~~~~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV--------VREAVFPVLKGVRNFVLLDPLEYGS 267 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH--------HHHHHHHHhccCCCEEEECCCCHHH
Confidence 347777777554322 34445555543 24555555453310 1122222222 358888866554
Q ss_pred -hhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHH
Q 037640 266 -VLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDD 344 (398)
Q Consensus 266 -~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
.++++.+++ ||+++| +.+.||+++|+|+|+.+..+++.. +. +.|.|..+. .+.++
T Consensus 268 ~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~-~~g~g~lv~----------------~d~~~ 323 (376)
T 1v4v_A 268 MAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GL-KAGILKLAG----------------TDPEG 323 (376)
T ss_dssp HHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HH-HHTSEEECC----------------SCHHH
T ss_pred HHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hh-cCCceEECC----------------CCHHH
Confidence 478888888 999884 346699999999999886666554 32 567777663 27899
Q ss_pred HHHHHHHHhccC
Q 037640 345 VKNAVERLMDEG 356 (398)
Q Consensus 345 l~~ai~~vl~~~ 356 (398)
|.++|.++++|+
T Consensus 324 la~~i~~ll~d~ 335 (376)
T 1v4v_A 324 VYRVVKGLLENP 335 (376)
T ss_dssp HHHHHHHHHTCH
T ss_pred HHHHHHHHHhCh
Confidence 999999999876
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.75 E-value=5.8e-08 Score=93.19 Aligned_cols=140 Identities=15% Similarity=0.185 Sum_probs=87.1
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHh----C-CCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCch-
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEA----S-NRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQ- 265 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq- 265 (398)
++++++++.|+...... .+..+++|+.. . +.++++..+.+. . +-+.+.+... .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~---~-----~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNP---N-----VREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCH---H-----HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCH---H-----HHHHHHHHhhcCCCEEEeCCCCHH
Confidence 34578888887654322 33445555443 2 455665434321 0 1122222222 368888766664
Q ss_pred --hhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 266 --VLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 266 --~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
.++++.+++ ||+.+|. .++||+++|+|+|+.+..++. ..+. +.|.|..+. .+.+
T Consensus 275 ~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~----~e~v-~~g~g~lv~----------------~d~~ 330 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTER----PEAV-TAGTVRLVG----------------TDKQ 330 (384)
T ss_dssp HHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSC----HHHH-HHTSEEEEC----------------SSHH
T ss_pred HHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCc----chhh-hCCceEEeC----------------CCHH
Confidence 457888888 9998864 488999999999999875443 2343 557887763 2789
Q ss_pred HHHHHHHHHhccCcchHHHHHH
Q 037640 344 DVKNAVERLMDEGNDGEERRNR 365 (398)
Q Consensus 344 ~l~~ai~~vl~~~~~~~~~~~~ 365 (398)
+|.++|.++++|++..+.+.++
T Consensus 331 ~la~~i~~ll~d~~~~~~~~~~ 352 (384)
T 1vgv_A 331 RIVEEVTRLLKDENEYQAMSRA 352 (384)
T ss_dssp HHHHHHHHHHHCHHHHHHHHSS
T ss_pred HHHHHHHHHHhChHHHhhhhhc
Confidence 9999999999887444444333
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.69 E-value=4e-07 Score=88.49 Aligned_cols=159 Identities=11% Similarity=0.109 Sum_probs=93.0
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEeCCCCchhhhhccCchhHHHHh-cCCCeEEeecCch-
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEA-----SNRPFIWVIREGETSKELKKWVVEDGFEERI-KGRGLVIWDWAPQ- 265 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~pq- 265 (398)
++++++++.|....... .+..+++|++. .+.++|+..+.+.. +-+.+.+.. ...++.+.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~--------~~~~l~~~~~~~~~v~l~~~l~~~ 293 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNPA--------VREKAMAILGGHERIHLIEPLDAI 293 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCHH--------HHHHHHHHhCCCCCEEEeCCCCHH
Confidence 44577777664322111 23445555443 35567776543310 111121212 2368999898874
Q ss_pred --hhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 266 --VLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 266 --~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
..+++++++ +|+-.|. .+.||.++|+|+|++|-.+++.. ++ +.|.|+.+. .+.+
T Consensus 294 ~~~~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v-~~g~~~lv~----------------~d~~ 349 (403)
T 3ot5_A 294 DFHNFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GI-EAGTLKLIG----------------TNKE 349 (403)
T ss_dssp HHHHHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HH-HHTSEEECC----------------SCHH
T ss_pred HHHHHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----he-eCCcEEEcC----------------CCHH
Confidence 357777887 9988753 33799999999999976555543 33 568776653 3789
Q ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 037640 344 DVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQ 392 (398)
Q Consensus 344 ~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 392 (398)
+|.+++.+++.|++..+.++ +..+ ...+++++.+-++.+.+
T Consensus 350 ~l~~ai~~ll~~~~~~~~m~-------~~~~-~~g~~~aa~rI~~~l~~ 390 (403)
T 3ot5_A 350 NLIKEALDLLDNKESHDKMA-------QAAN-PYGDGFAANRILAAIKS 390 (403)
T ss_dssp HHHHHHHHHHHCHHHHHHHH-------HSCC-TTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCHHHHHHHH-------hhcC-cccCCcHHHHHHHHHHH
Confidence 99999999998763222222 2211 12456665555555444
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.57 E-value=1.1e-05 Score=77.58 Aligned_cols=144 Identities=13% Similarity=0.069 Sum_probs=89.1
Q ss_pred eEEEeeCCc-cc-CCHHHHHHHHHHHHhC--CCCEEEEEeCCCCchhhhhccCchhHHHHhc--CCCeEEeecCchh---
Q 037640 196 VVYACLGSM-CN-LIPSQMMELGLGLEAS--NRPFIWVIREGETSKELKKWVVEDGFEERIK--GRGLVIWDWAPQV--- 266 (398)
Q Consensus 196 vv~vs~Gs~-~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~v~~~~~~pq~--- 266 (398)
.+++..|+. .. ...+.+.+.+..+.+. +.++++ +|... . +.+.+... ..++.+.+++++.
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~~~---------~-~~l~~~~~~~~~~v~~~g~~~~~~~~ 277 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILI-VGRGD---------E-DELREQAGDLAGHLRFLGQVDDATKA 277 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEE-ESCSC---------H-HHHHHHTGGGGGGEEECCSCCHHHHH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEE-EcCCc---------H-HHHHHHHHhccCcEEEEecCCHHHHH
Confidence 466777887 43 3334444444444332 344443 44432 1 22222222 4789999999975
Q ss_pred hhhcCCCcceeee--cCCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 267 LILSHPSVGGFLT--HCGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 267 ~~L~~~~~~~~it--hgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
.++..+++-++-+ +.|+ ++++||+++|+|+|+.+. ......+ +.-+.|..++.. +.+
T Consensus 278 ~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~~---------------d~~ 337 (406)
T 2gek_A 278 SAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLVPVD---------------DAD 337 (406)
T ss_dssp HHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEECCTT---------------CHH
T ss_pred HHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEeCCC---------------CHH
Confidence 6888888833332 3344 589999999999999865 3344455 455677777543 789
Q ss_pred HHHHHHHHHhccCcchHHHHHHHHHHH
Q 037640 344 DVKNAVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 344 ~l~~ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
++.++|.++++|++....+.+++++..
T Consensus 338 ~l~~~i~~l~~~~~~~~~~~~~~~~~~ 364 (406)
T 2gek_A 338 GMAAALIGILEDDQLRAGYVARASERV 364 (406)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 999999999988755555555554443
No 32
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.47 E-value=5.2e-05 Score=72.72 Aligned_cols=143 Identities=10% Similarity=0.085 Sum_probs=86.3
Q ss_pred eEEEeeCCccc-CCHHHHHHHHHHHHh-CCCCEEEEEeCCCCchhhhhccCchhHHHHhc----CCCeEEeecCch-hhh
Q 037640 196 VVYACLGSMCN-LIPSQMMELGLGLEA-SNRPFIWVIREGETSKELKKWVVEDGFEERIK----GRGLVIWDWAPQ-VLI 268 (398)
Q Consensus 196 vv~vs~Gs~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~v~~~~~~pq-~~~ 268 (398)
.+++..|+... ...+.+.+.+..+.+ .+.+++ .+|.... .+.+.+... ..+|.+.++..+ ..+
T Consensus 212 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~-i~G~g~~---------~~~l~~~~~~~~l~~~v~~~g~~~~~~~~ 281 (394)
T 2jjm_A 212 KILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLL-LVGDGPE---------FCTILQLVKNLHIEDRVLFLGKQDNVAEL 281 (394)
T ss_dssp CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEE-EECCCTT---------HHHHHHHHHTTTCGGGBCCCBSCSCTHHH
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHhhCCCEEE-EECCchH---------HHHHHHHHHHcCCCCeEEEeCchhhHHHH
Confidence 45666787764 233333333333333 244443 4443321 122222221 357777777554 368
Q ss_pred hcCCCcceee----ecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHH
Q 037640 269 LSHPSVGGFL----THCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDD 344 (398)
Q Consensus 269 L~~~~~~~~i----thgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
++.+++ +| .-|.-++++||+++|+|+|+.+..+ ....+ +.-+.|..++.. +.++
T Consensus 282 ~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v-~~~~~g~~~~~~---------------d~~~ 339 (394)
T 2jjm_A 282 LAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVI-QHGDTGYLCEVG---------------DTTG 339 (394)
T ss_dssp HHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTC-CBTTTEEEECTT---------------CHHH
T ss_pred HHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHh-hcCCceEEeCCC---------------CHHH
Confidence 888888 66 4455679999999999999987532 22233 244567777543 7899
Q ss_pred HHHHHHHHhccCcchHHHHHHHHHHH
Q 037640 345 VKNAVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 345 l~~ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
+.++|.++++|++....+.+++++..
T Consensus 340 la~~i~~l~~~~~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 340 VADQAIQLLKDEELHRNMGERARESV 365 (394)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 99999999988755556666665544
No 33
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.46 E-value=4.3e-05 Score=74.34 Aligned_cols=97 Identities=11% Similarity=0.084 Sum_probs=71.9
Q ss_pred CCCeEEeecCchh---hhhcCCCcceeeecC----CchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCC
Q 037640 254 GRGLVIWDWAPQV---LILSHPSVGGFLTHC----GWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVEN 326 (398)
Q Consensus 254 ~~~v~~~~~~pq~---~~L~~~~~~~~ithg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~ 326 (398)
..++.+.+|+|+. .+++.+++ ||.-. .-++++||+++|+|+|+.+. ......+ +.-+.|..++.
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECCC--
Confidence 4689999999864 57778887 66432 24689999999999999764 2344445 35557777754
Q ss_pred CCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHH
Q 037640 327 PMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKM 372 (398)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~ 372 (398)
-+.+++.++|.++++|++..+.+.+++++..+.
T Consensus 376 -------------~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 376 -------------HSPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp -------------CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred -------------CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 378999999999999887677777777766555
No 34
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.46 E-value=2.1e-06 Score=73.21 Aligned_cols=139 Identities=9% Similarity=0.067 Sum_probs=88.2
Q ss_pred EEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHH--HHhcCCCeEEeecCch---hhhhc
Q 037640 197 VYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFE--ERIKGRGLVIWDWAPQ---VLILS 270 (398)
Q Consensus 197 v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~v~~~~~~pq---~~~L~ 270 (398)
+++..|+... ...+..++++++.. +.++++. |....... +-+... +.-...|+.+.+|+++ ..+++
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~-G~~~~~~~-----l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIV-GWFSKGDH-----AERYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEE-BCCCTTST-----HHHHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEE-ecCccHHH-----HHHHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 4566777664 23455677777776 5666654 43322111 111111 1112468999999997 46888
Q ss_pred CCCcceeee---cCCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHH
Q 037640 271 HPSVGGFLT---HCGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVK 346 (398)
Q Consensus 271 ~~~~~~~it---hgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 346 (398)
.+++ +|. +.|+ ++++||+++|+|+|+... ..+...+ +.-+.|..+ . -+.+++.
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~---------------~d~~~l~ 153 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N---------------ADVNEII 153 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C---------------SCHHHHH
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C---------------CCHHHHH
Confidence 8888 554 3344 599999999999999754 3444444 355678777 4 3789999
Q ss_pred HHHHHHhccCcc-hHHHHHHH
Q 037640 347 NAVERLMDEGND-GEERRNRA 366 (398)
Q Consensus 347 ~ai~~vl~~~~~-~~~~~~~a 366 (398)
++|.++++|++. .+.++++|
T Consensus 154 ~~i~~l~~~~~~~~~~~~~~a 174 (177)
T 2f9f_A 154 DAMKKVSKNPDKFKKDCFRRA 174 (177)
T ss_dssp HHHHHHHHCTTTTHHHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHH
Confidence 999999988754 33333333
No 35
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.17 E-value=0.0017 Score=62.51 Aligned_cols=145 Identities=14% Similarity=0.136 Sum_probs=92.1
Q ss_pred eEEEeeCCcc-c-CCHHHHHHHHHHHHh----CCCCEEEEEeCCCCchhhhhccCchhHHHHh--cCCCeEEeecCchhh
Q 037640 196 VVYACLGSMC-N-LIPSQMMELGLGLEA----SNRPFIWVIREGETSKELKKWVVEDGFEERI--KGRGLVIWDWAPQVL 267 (398)
Q Consensus 196 vv~vs~Gs~~-~-~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~v~~~~~~pq~~ 267 (398)
.+++..|+.. . ...+.+.+.+..+.+ .+.++++ +|..... ..+.+.+.. .+.++.+.+|+++.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i-~G~g~~~-------~~~~l~~~~~~~~~~~~~~g~~~~~~ 323 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFII-IGKGDPE-------LEGWARSLEEKHGNVKVITEMLSREF 323 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEE-ECCCCHH-------HHHHHHHHHHHCTTEEEECSCCCHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEE-EcCCChh-------HHHHHHHHHhhcCCEEEEcCCCCHHH
Confidence 6777888887 4 345555555555554 2344443 3433211 111222211 135566778899864
Q ss_pred ---hhcCCCcceeeec----CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccc
Q 037640 268 ---ILSHPSVGGFLTH----CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLV 340 (398)
Q Consensus 268 ---~L~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~ 340 (398)
+++.+++ +|.- |--++++||+++|+|+|+... ......+ .-|.|..+...
T Consensus 324 ~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~--~~~~g~~~~~~--------------- 380 (439)
T 3fro_A 324 VRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII--TNETGILVKAG--------------- 380 (439)
T ss_dssp HHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC--CTTTCEEECTT---------------
T ss_pred HHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE--EcCceEEeCCC---------------
Confidence 6778887 5532 224799999999999999754 2333333 34688877653
Q ss_pred cHHHHHHHHHHHhc-cCcchHHHHHHHHHHHH
Q 037640 341 KRDDVKNAVERLMD-EGNDGEERRNRALNLAK 371 (398)
Q Consensus 341 ~~~~l~~ai~~vl~-~~~~~~~~~~~a~~l~~ 371 (398)
+.+++.++|.++++ |++..+.+.+++++..+
T Consensus 381 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~ 412 (439)
T 3fro_A 381 DPGELANAILKALELSRSDLSKFRENCKKRAM 412 (439)
T ss_dssp CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Confidence 78999999999998 88877888887776653
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.02 E-value=4.3e-05 Score=72.43 Aligned_cols=147 Identities=13% Similarity=0.167 Sum_probs=95.4
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCCC----CE-EEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCch-hhh
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASNR----PF-IWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQ-VLI 268 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~----~~-i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq-~~~ 268 (398)
.+++..|+.... .....+++++..... .+ ++.+|... ... +. .+..+.. ..++.+.++..+ ..+
T Consensus 197 ~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~~l~i~G~g~-~~~-----~~-~~~~~~~~~~~v~~~g~~~~~~~~ 267 (374)
T 2iw1_A 197 NLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLLFVVGQDK-PRK-----FE-ALAEKLGVRSNVHFFSGRNDVSEL 267 (374)
T ss_dssp EEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEEEEESSSC-CHH-----HH-HHHHHHTCGGGEEEESCCSCHHHH
T ss_pred eEEEEeccchhh--cCHHHHHHHHHHhHhccCCceEEEEEcCCC-HHH-----HH-HHHHHcCCCCcEEECCCcccHHHH
Confidence 566777876542 344556677766432 22 33444432 111 11 1112222 468888888654 358
Q ss_pred hcCCCcceeee----cCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHH
Q 037640 269 LSHPSVGGFLT----HCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDD 344 (398)
Q Consensus 269 L~~~~~~~~it----hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
++.+++ +|. -|.-++++||+++|+|+|+.... .+...+ +..+.|..+... -+.++
T Consensus 268 ~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~~~--------------~~~~~ 326 (374)
T 2iw1_A 268 MAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYI-ADANCGTVIAEP--------------FSQEQ 326 (374)
T ss_dssp HHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHH-HHHTCEEEECSS--------------CCHHH
T ss_pred HHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----Cchhhh-ccCCceEEeCCC--------------CCHHH
Confidence 888888 664 45568999999999999997653 445566 477889888622 48899
Q ss_pred HHHHHHHHhccCcchHHHHHHHHHHHHH
Q 037640 345 VKNAVERLMDEGNDGEERRNRALNLAKM 372 (398)
Q Consensus 345 l~~ai~~vl~~~~~~~~~~~~a~~l~~~ 372 (398)
+.++|.++++|++..+.+.+++++..+.
T Consensus 327 l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 327 LNEVLRKALTQSPLRMAWAENARHYADT 354 (374)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 9999999999886666777777666554
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=97.86 E-value=2.8e-05 Score=73.89 Aligned_cols=132 Identities=11% Similarity=0.104 Sum_probs=80.9
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHhC-----CCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEEeecCchh
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEAS-----NRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVIWDWAPQV 266 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~pq~ 266 (398)
++++++++.|...... ..+..+++|++.. +.++++ +..... . +-+.+.+... .+++.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~~-~-----~~~~~~~~~~~~~~v~~~g~~~~~ 274 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMNP-V-----VRETANDILGDYGRIHLIEPLDVI 274 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSCH-H-----HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCCH-H-----HHHHHHHHhhccCCEEEeCCCCHH
Confidence 3456777777755322 2345556665532 344444 322111 1 1122222222 2689887777654
Q ss_pred ---hhhcCCCcceeeecCCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHH
Q 037640 267 ---LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRD 343 (398)
Q Consensus 267 ---~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~ 343 (398)
.+++.+++ ||+..| +.++||+++|+|+|+....+.. ..+. ..|.|..+. .+.+
T Consensus 275 ~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v-~~g~g~~v~----------------~d~~ 330 (375)
T 3beo_A 275 DFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGI-EAGTLKLAG----------------TDEE 330 (375)
T ss_dssp HHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHH-HTTSEEECC----------------SCHH
T ss_pred HHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceee-cCCceEEcC----------------CCHH
Confidence 57888888 998874 4588999999999998543332 2333 567777663 2789
Q ss_pred HHHHHHHHHhccCc
Q 037640 344 DVKNAVERLMDEGN 357 (398)
Q Consensus 344 ~l~~ai~~vl~~~~ 357 (398)
+|.++|.++++|++
T Consensus 331 ~la~~i~~ll~~~~ 344 (375)
T 3beo_A 331 TIFSLADELLSDKE 344 (375)
T ss_dssp HHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHhChH
Confidence 99999999998763
No 38
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.85 E-value=0.00013 Score=60.80 Aligned_cols=143 Identities=13% Similarity=0.154 Sum_probs=84.4
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHHhCC--CCE-EEEEeCCCCchhhhhccCchhHHHHhc--CCCeEEeecCchh---
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLEASN--RPF-IWVIREGETSKELKKWVVEDGFEERIK--GRGLVIWDWAPQV--- 266 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~-i~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~v~~~~~~pq~--- 266 (398)
+++++..|+.... .....+++++.... ..+ ++.+|.... .+.+.+... +.++.+ +|+|+.
T Consensus 2 ~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~i~G~g~~---------~~~~~~~~~~~~~~v~~-g~~~~~~~~ 69 (166)
T 3qhp_A 2 PFKIAMVGRYSNE--KNQSVLIKAVALSKYKQDIVLLLKGKGPD---------EKKIKLLAQKLGVKAEF-GFVNSNELL 69 (166)
T ss_dssp CEEEEEESCCSTT--TTHHHHHHHHHTCTTGGGEEEEEECCSTT---------HHHHHHHHHHHTCEEEC-CCCCHHHHH
T ss_pred ceEEEEEeccchh--cCHHHHHHHHHHhccCCCeEEEEEeCCcc---------HHHHHHHHHHcCCeEEE-eecCHHHHH
Confidence 3677778887652 34555666666542 123 223343321 122222211 237888 999865
Q ss_pred hhhcCCCcceeee----cCCchhHHHHHHhCC-CEeecccccchhhhHHHHHHHhcceEEeccCCCCCcccccccccccc
Q 037640 267 LILSHPSVGGFLT----HCGWNSTLEGVCAGL-PLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVK 341 (398)
Q Consensus 267 ~~L~~~~~~~~it----hgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~ 341 (398)
.++..+++ +|. -|.-++++||+++|+ |+|+..-.+. ....+ +..+. .+.. -+
T Consensus 70 ~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~-~~~~~--~~~~---------------~~ 126 (166)
T 3qhp_A 70 EILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFA-LDERS--LFEP---------------NN 126 (166)
T ss_dssp HHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGC-SSGGG--EECT---------------TC
T ss_pred HHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhc-cCCce--EEcC---------------CC
Confidence 46778877 664 233469999999996 9999432111 11111 12122 3332 47
Q ss_pred HHHHHHHHHHHhccCcchHHHHHHHHHHHHH
Q 037640 342 RDDVKNAVERLMDEGNDGEERRNRALNLAKM 372 (398)
Q Consensus 342 ~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~ 372 (398)
.+++.++|.++++|++..+.+.+++++..+.
T Consensus 127 ~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~ 157 (166)
T 3qhp_A 127 AKDLSAKIDWWLENKLERERMQNEYAKSALN 157 (166)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 8999999999999887777777777776544
No 39
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.77 E-value=0.00029 Score=70.99 Aligned_cols=152 Identities=14% Similarity=0.068 Sum_probs=93.2
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEE--eCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhh---
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVI--REGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLIL--- 269 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L--- 269 (398)
.++|.||++.....++.+....+-+++.+..++|.. +..... ... +-..+.+.--++.+++.+.+|+.+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~--~~~--~~~~~~~~GI~~Rv~F~g~~p~~e~la~y 516 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI--THP--YVERFIKSYLGDSATAHPHSPYHQYLRIL 516 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG--GHH--HHHHHHHHHHGGGEEEECCCCHHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh--hHH--HHHHHHHcCCCccEEEcCCCCHHHHHHHH
Confidence 589999999888899998888888888888888753 322110 000 11111111112567788888876644
Q ss_pred cCCCcceeee---cCCchhHHHHHHhCCCEeecccccc-hhhhHHHHHHHhcceEE-eccCCCCCccccccccccccHHH
Q 037640 270 SHPSVGGFLT---HCGWNSTLEGVCAGLPLLTWPLFAD-QFTNEKLAVHLLKIGVK-IGVENPMTWGEEQNIGVLVKRDD 344 (398)
Q Consensus 270 ~~~~~~~~it---hgG~~s~~eal~~GvP~l~~P~~~D-Q~~na~~v~~~~g~g~~-l~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
..+++ |+. .+|.+|++||+++|||+|+.+-..= ...-+..+ ...|+... +. -+.++
T Consensus 517 ~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LIA----------------~d~ee 577 (631)
T 3q3e_A 517 HNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLIA----------------NTVDE 577 (631)
T ss_dssp HTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGEE----------------SSHHH
T ss_pred hcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCcceec----------------CCHHH
Confidence 66666 543 3778999999999999999874321 11112222 24454432 21 25667
Q ss_pred HHHHHHHHhccCcchHHHHHHHHHH
Q 037640 345 VKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 345 l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
..+..-++.+|++....+|+++++-
T Consensus 578 Yv~~Av~La~D~~~l~~LR~~Lr~~ 602 (631)
T 3q3e_A 578 YVERAVRLAENHQERLELRRYIIEN 602 (631)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 6666668888885555555554433
No 40
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.75 E-value=0.0003 Score=73.33 Aligned_cols=151 Identities=15% Similarity=0.165 Sum_probs=95.5
Q ss_pred CCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHH-hcCCCeEEeecCchhhhhc-
Q 037640 193 PKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEER-IKGRGLVIWDWAPQVLILS- 270 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~~pq~~~L~- 270 (398)
++.|||.||-+....+++.+..-++-|++.+.-++|.......... . +-..+... +....+++.+.+|..+.|+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~--~--l~~~~~~~gi~~~r~~f~~~~~~~~~l~~ 596 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEP--N--IQQYAQNMGLPQNRIIFSPVAPKEEHVRR 596 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHH--H--HHHHHHHTTCCGGGEEEEECCCHHHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHH--H--HHHHHHhcCCCcCeEEECCCCCHHHHHHH
Confidence 4559999999999999999999999999999999999876532110 0 11111111 2245688888888766543
Q ss_pred CCCcceeee---cCCchhHHHHHHhCCCEeeccccc-chhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHH
Q 037640 271 HPSVGGFLT---HCGWNSTLEGVCAGLPLLTWPLFA-DQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVK 346 (398)
Q Consensus 271 ~~~~~~~it---hgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 346 (398)
+..+.+|+. .+|.+|+.|||++|||+|.+|-.. =...-+..+ ..+|+...+... ..+-+.
T Consensus 597 ~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~ia~~---------------~~~Y~~ 660 (723)
T 4gyw_A 597 GQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELIAKN---------------RQEYED 660 (723)
T ss_dssp GGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGBCSS---------------HHHHHH
T ss_pred hCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCcccccCC---------------HHHHHH
Confidence 333334664 788999999999999999999322 112223334 456665544321 233355
Q ss_pred HHHHHHhccCcchHHHHH
Q 037640 347 NAVERLMDEGNDGEERRN 364 (398)
Q Consensus 347 ~ai~~vl~~~~~~~~~~~ 364 (398)
.|| ++-+|++....+|+
T Consensus 661 ~a~-~la~d~~~l~~lr~ 677 (723)
T 4gyw_A 661 IAV-KLGTDLEYLKKVRG 677 (723)
T ss_dssp HHH-HHHHCHHHHHHHHH
T ss_pred HHH-HHhcCHHHHHHHHH
Confidence 555 56666644444443
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.69 E-value=0.0013 Score=66.29 Aligned_cols=96 Identities=18% Similarity=0.116 Sum_probs=64.9
Q ss_pred CCeEEeecCchh---hhhcCCCcceee--e-cCCchhHHHHHHhCCCEeecccccchhhh-HHHHHHHhcceEEeccCCC
Q 037640 255 RGLVIWDWAPQV---LILSHPSVGGFL--T-HCGWNSTLEGVCAGLPLLTWPLFADQFTN-EKLAVHLLKIGVKIGVENP 327 (398)
Q Consensus 255 ~~v~~~~~~pq~---~~L~~~~~~~~i--t-hgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~~g~g~~l~~~~~ 327 (398)
.+|++.+++|+. .++..+++ || + +|+-++++||+++|+|+|++|-..-.... +..+ ...|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc----
Confidence 679999999854 46777777 65 2 25567999999999999998753211112 3344 3556554332
Q ss_pred CCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 328 MTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 328 ~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
-+.+++.+++.++++|++..+.+++++++.
T Consensus 507 ------------~~~~~la~~i~~l~~~~~~~~~~~~~~~~~ 536 (568)
T 2vsy_A 507 ------------ADDAAFVAKAVALASDPAALTALHARVDVL 536 (568)
T ss_dssp ------------SSHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ------------CCHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 178899999999999875555555555443
No 42
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.63 E-value=0.0011 Score=56.68 Aligned_cols=144 Identities=11% Similarity=0.109 Sum_probs=86.6
Q ss_pred EEEeeCCcc-c-CCHHHHHHHHHHHH---h-CCCCEEEEEeCCCCchhhhhccCchhHHHHhc-CCCeEE-eecCchh--
Q 037640 197 VYACLGSMC-N-LIPSQMMELGLGLE---A-SNRPFIWVIREGETSKELKKWVVEDGFEERIK-GRGLVI-WDWAPQV-- 266 (398)
Q Consensus 197 v~vs~Gs~~-~-~~~~~~~~~~~al~---~-~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~v~~-~~~~pq~-- 266 (398)
+++.+|+.. . ...+.+.+.+..+. + .+.++++. |.... . ..+.+.+... ..++.+ .+++++.
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~-G~~~~-~------~~~~l~~~~~~~~~v~~~~g~~~~~~~ 109 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGDP-E------LEGWARSLEEKHGNVKVITEMLSREFV 109 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEE-CCBCH-H------HHHHHHHHHHHCTTEEEECSCCCHHHH
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEE-CCCCh-H------HHHHHHHHHHhcCCEEEEeccCCHHHH
Confidence 566778877 4 33445555555553 2 23444443 33210 0 0112222111 128999 9999854
Q ss_pred -hhhcCCCcceeeecC---C-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCcccccccccccc
Q 037640 267 -LILSHPSVGGFLTHC---G-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVK 341 (398)
Q Consensus 267 -~~L~~~~~~~~ithg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~ 341 (398)
.++..+++ +|.-. | -++++||+++|+|+|+.... .....+ ..+.|..+.. -+
T Consensus 110 ~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~~---------------~~ 166 (200)
T 2bfw_A 110 RELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVKA---------------GD 166 (200)
T ss_dssp HHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEECT---------------TC
T ss_pred HHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEecC---------------CC
Confidence 57878887 55432 3 36899999999999997543 222222 3456776654 37
Q ss_pred HHHHHHHHHHHhc-cCcchHHHHHHHHHHHH
Q 037640 342 RDDVKNAVERLMD-EGNDGEERRNRALNLAK 371 (398)
Q Consensus 342 ~~~l~~ai~~vl~-~~~~~~~~~~~a~~l~~ 371 (398)
.+++.++|.++++ |++..+.+.+++++..+
T Consensus 167 ~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 167 PGELANAILKALELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 8999999999998 88666666666665543
No 43
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.57 E-value=0.0018 Score=62.39 Aligned_cols=93 Identities=11% Similarity=-0.000 Sum_probs=64.7
Q ss_pred CCCeEEeecCc---h---hhhhcCCCcceeeecC----CchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEec
Q 037640 254 GRGLVIWDWAP---Q---VLILSHPSVGGFLTHC----GWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIG 323 (398)
Q Consensus 254 ~~~v~~~~~~p---q---~~~L~~~~~~~~ithg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~ 323 (398)
..+|.+.+|++ + .++++.+++ ||.-. .-++++||+++|+|+|+.+.. .+...+ +.-+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~~----g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAVG----GIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESCH----HHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccCC----CChhhe-ecCCCeEEEC
Confidence 47899988776 2 246777777 66543 346899999999999997642 344444 3445666552
Q ss_pred cCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 037640 324 VENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLA 370 (398)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~ 370 (398)
+.+++.++|.++++|++....+.+++++..
T Consensus 365 -----------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 365 -----------------DANEAVEVVLYLLKHPEVSKEMGAKAKERV 394 (416)
T ss_dssp -----------------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 568999999999988755555555555543
No 44
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.41 E-value=0.0013 Score=62.78 Aligned_cols=98 Identities=10% Similarity=0.177 Sum_probs=69.5
Q ss_pred CeEEeecCchh-hhhcCCCcceeee---c--CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCC
Q 037640 256 GLVIWDWAPQV-LILSHPSVGGFLT---H--CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMT 329 (398)
Q Consensus 256 ~v~~~~~~pq~-~~L~~~~~~~~it---h--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~ 329 (398)
++.+.++..+. .+++.+++ |+. . +|.++++||+++|+|+|+-|..++.......+ ...|.++.. .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~--~---- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEV--K---- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEEC--C----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEe--C----
Confidence 45555544433 57777766 553 2 23478999999999999877666665555554 245665544 2
Q ss_pred ccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Q 037640 330 WGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAK 374 (398)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~ 374 (398)
+.++|.++|.++++| +..+.+.+++++..+.-.
T Consensus 332 -----------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 -----------NETELVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp -----------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 678999999999998 888899999988776543
No 45
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.31 E-value=0.00088 Score=66.34 Aligned_cols=96 Identities=14% Similarity=0.108 Sum_probs=67.6
Q ss_pred CCCeEEeecCchh---hhhcCC----Ccceeeec---CC-chhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEe
Q 037640 254 GRGLVIWDWAPQV---LILSHP----SVGGFLTH---CG-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKI 322 (398)
Q Consensus 254 ~~~v~~~~~~pq~---~~L~~~----~~~~~ith---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l 322 (398)
..+|.+.+++|+. .+++.+ ++ ||.- -| -++++||+++|+|+|+.... .....+ +.-..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRNG----GPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESSB----HHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecCC----CHHHHh-cCCceEEEe
Confidence 4679999999765 467677 66 5532 23 36899999999999998642 334444 344478877
Q ss_pred ccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHH
Q 037640 323 GVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAK 371 (398)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~ 371 (398)
+.. +.+++.++|.++++|++..+.+.+++++..+
T Consensus 407 ~~~---------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~ 440 (499)
T 2r60_A 407 DPE---------------DPEDIARGLLKAFESEETWSAYQEKGKQRVE 440 (499)
T ss_dssp CTT---------------CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCC---------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 643 7899999999999987656666666555433
No 46
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.13 E-value=0.0034 Score=58.57 Aligned_cols=127 Identities=10% Similarity=0.041 Sum_probs=79.0
Q ss_pred EEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchh---hhhcCCC
Q 037640 197 VYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQV---LILSHPS 273 (398)
Q Consensus 197 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~---~~L~~~~ 273 (398)
+++..|+... ......++++++..+.++++. |....... + ..+..+.. .++.+.+|+++. .+++.++
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i~-G~g~~~~~-----l-~~~~~~~~-~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVLA-GPAWEPEY-----F-DEITRRYG-STVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEEE-SCCCCHHH-----H-HHHHHHHT-TTEEECCCCCHHHHHHHHHHCS
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEEE-eCcccHHH-----H-HHHHHHhC-CCEEEeccCCHHHHHHHHHhCC
Confidence 3455677653 234556667776667776654 44322111 1 11222233 799999999976 6888888
Q ss_pred cceeeec-----------CC-chhHHHHHHhCCCEeecccccchhhhHHHHHHH--hcceEEeccCCCCCcccccccccc
Q 037640 274 VGGFLTH-----------CG-WNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHL--LKIGVKIGVENPMTWGEEQNIGVL 339 (398)
Q Consensus 274 ~~~~ith-----------gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~--~g~g~~l~~~~~~~~~~~~~~~~~ 339 (398)
+-++-++ -| -++++||+++|+|+|+.... .+...+ +. -+.|..+ . .
T Consensus 234 v~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~--~-------------~ 293 (342)
T 2iuy_A 234 AVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGT--D-------------F 293 (342)
T ss_dssp EEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSS--C-------------C
T ss_pred EEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEc--C-------------C
Confidence 8333333 33 36899999999999998753 344444 33 2345433 1 4
Q ss_pred ccHHHHHHHHHHHhc
Q 037640 340 VKRDDVKNAVERLMD 354 (398)
Q Consensus 340 ~~~~~l~~ai~~vl~ 354 (398)
+.+++.++|.++++
T Consensus 294 -d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 294 -APDEARRTLAGLPA 307 (342)
T ss_dssp -CHHHHHHHHHTSCC
T ss_pred -CHHHHHHHHHHHHH
Confidence 78999999999885
No 47
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.09 E-value=0.016 Score=55.39 Aligned_cols=91 Identities=14% Similarity=0.143 Sum_probs=57.4
Q ss_pred eEEeecCchh---hhhcCCCcceeeec--CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcc-------------
Q 037640 257 LVIWDWAPQV---LILSHPSVGGFLTH--CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKI------------- 318 (398)
Q Consensus 257 v~~~~~~pq~---~~L~~~~~~~~ith--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~------------- 318 (398)
+.+.+|+++. .+++.+++-++-++ |.-++++||+++|+|+|+.... .....+ .-|.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v--~~~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF--SGDCVYKIKPSAWISVD 329 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS--CTTTSEEECCCEEEECT
T ss_pred eeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH--ccCcccccccccccccc
Confidence 6777899855 36777887333232 2245899999999999996532 223233 2222
Q ss_pred ---eE--EeccCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 037640 319 ---GV--KIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNL 369 (398)
Q Consensus 319 ---g~--~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l 369 (398)
|. .+.. -+.+++.++| ++++|++..+.+.+++++.
T Consensus 330 ~~~G~~gl~~~---------------~d~~~la~~i-~l~~~~~~~~~~~~~a~~~ 369 (413)
T 3oy2_A 330 DRDGIGGIEGI---------------IDVDDLVEAF-TFFKDEKNRKEYGKRVQDF 369 (413)
T ss_dssp TTCSSCCEEEE---------------CCHHHHHHHH-HHTTSHHHHHHHHHHHHHH
T ss_pred cccCcceeeCC---------------CCHHHHHHHH-HHhcCHHHHHHHHHHHHHH
Confidence 33 4432 3889999999 9999874444444444443
No 48
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.90 E-value=0.0075 Score=59.22 Aligned_cols=141 Identities=13% Similarity=0.044 Sum_probs=79.6
Q ss_pred eEEEeeCCccc-CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHh--cCCCeE-EeecCchh--hhh
Q 037640 196 VVYACLGSMCN-LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERI--KGRGLV-IWDWAPQV--LIL 269 (398)
Q Consensus 196 vv~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~v~-~~~~~pq~--~~L 269 (398)
.+++..|.... ...+.+.+.+..+.+.+.++++. |..... .-+.+.+.. .+.++. +.++.... .++
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~~~-------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 364 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALL-GAGDPV-------LQEGFLAAAAEYPGQVGVQIGYHEAFSHRIM 364 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEE-EEECHH-------HHHHHHHHHHHSTTTEEEEESCCHHHHHHHH
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEE-eCCchH-------HHHHHHHHHHhCCCcEEEeCCCCHHHHHHHH
Confidence 45566677654 22333333333343345665554 332100 111222211 136775 67774332 578
Q ss_pred cCCCcceeeec----CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHh---------cceEEeccCCCCCccccccc
Q 037640 270 SHPSVGGFLTH----CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLL---------KIGVKIGVENPMTWGEEQNI 336 (398)
Q Consensus 270 ~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------g~g~~l~~~~~~~~~~~~~~ 336 (398)
+.+++ ||.- |.-++++||+++|+|+|+.... .....+ +.- +.|..+...
T Consensus 365 ~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v-~~~~~~~~~~~~~~G~l~~~~----------- 426 (485)
T 2qzs_A 365 GGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTV-SDCSLENLADGVASGFVFEDS----------- 426 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHC-CBCCHHHHHTTCCCBEEECSS-----------
T ss_pred HhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----Ccccee-ccCccccccccccceEEECCC-----------
Confidence 88888 5532 3346899999999999997542 333333 232 577777543
Q ss_pred cccccHHHHHHHHHHHh---ccCcchHHHHHHH
Q 037640 337 GVLVKRDDVKNAVERLM---DEGNDGEERRNRA 366 (398)
Q Consensus 337 ~~~~~~~~l~~ai~~vl---~~~~~~~~~~~~a 366 (398)
+.+++.++|.+++ .|++....+.+++
T Consensus 427 ----d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 455 (485)
T 2qzs_A 427 ----NAWSLLRAIRRAFVLWSRPSLWRFVQRQA 455 (485)
T ss_dssp ----SHHHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 7899999999998 6664444444443
No 49
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.89 E-value=0.0046 Score=60.79 Aligned_cols=141 Identities=10% Similarity=0.028 Sum_probs=81.1
Q ss_pred eEEEeeCCcccCC-HHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHh--cCCCeE-EeecCchh--hhh
Q 037640 196 VVYACLGSMCNLI-PSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERI--KGRGLV-IWDWAPQV--LIL 269 (398)
Q Consensus 196 vv~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~v~-~~~~~pq~--~~L 269 (398)
.+++..|+..... .+.+.+.+..+.+.+.++++. |..... +-+.+.+.. .+.++. ..++.... .++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~~~-------~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 363 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGDVA-------LEGALLAAASRHHGRVGVAIGYNEPLSHLMQ 363 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBCHH-------HHHHHHHHHHHTTTTEEEEESCCHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCchH-------HHHHHHHHHHhCCCcEEEecCCCHHHHHHHH
Confidence 4667788876532 344443344443345665554 433210 111222211 136786 66773332 578
Q ss_pred cCCCcceeeec----CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHh---------cceEEeccCCCCCccccccc
Q 037640 270 SHPSVGGFLTH----CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLL---------KIGVKIGVENPMTWGEEQNI 336 (398)
Q Consensus 270 ~~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------g~g~~l~~~~~~~~~~~~~~ 336 (398)
+.+++ ||.- |--++++||+++|+|+|+.... .....+ +.- +.|..+..
T Consensus 364 ~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v-~~~~~~~~~~~~~~G~l~~~------------ 424 (485)
T 1rzu_A 364 AGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTV-IDANHAALASKAATGVQFSP------------ 424 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHC-CBCCHHHHHTTCCCBEEESS------------
T ss_pred hcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhhee-cccccccccccCCcceEeCC------------
Confidence 88887 6532 3346899999999999997542 333333 232 57777754
Q ss_pred cccccHHHHHHHHHHHh---ccCcchHHHHHHH
Q 037640 337 GVLVKRDDVKNAVERLM---DEGNDGEERRNRA 366 (398)
Q Consensus 337 ~~~~~~~~l~~ai~~vl---~~~~~~~~~~~~a 366 (398)
-+.+++.++|.+++ .|++..+.+.+++
T Consensus 425 ---~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 454 (485)
T 1rzu_A 425 ---VTLDGLKQAIRRTVRYYHDPKLWTQMQKLG 454 (485)
T ss_dssp ---CSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 37899999999998 6664444444443
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.84 E-value=0.0036 Score=58.97 Aligned_cols=112 Identities=12% Similarity=0.100 Sum_probs=79.3
Q ss_pred CeEEeecCchhhh---hcCCCcceeeecCCc---------hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEec
Q 037640 256 GLVIWDWAPQVLI---LSHPSVGGFLTHCGW---------NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIG 323 (398)
Q Consensus 256 ~v~~~~~~pq~~~---L~~~~~~~~ithgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~ 323 (398)
||...+|+|+.++ |+.++.+++.+-+.+ +-+.|++++|+|+|+.+ ...++..+ ++.++|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 9999999998765 445555555422222 35789999999999865 44677777 6899999873
Q ss_pred cCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 324 VENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
+.+++.+++.++. +++.+.+++|+++.++.++ .|--..+.+.+.+.++.
T Consensus 290 -----------------~~~e~~~~i~~l~--~~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~~~ 338 (339)
T 3rhz_A 290 -----------------DVEEAIMKVKNVN--EDEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQAI 338 (339)
T ss_dssp -----------------SHHHHHHHHHHCC--HHHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHHHH
T ss_pred -----------------CHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHhc
Confidence 3578888888754 4567889999999988876 34445556655555443
No 51
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=96.24 E-value=0.032 Score=58.55 Aligned_cols=95 Identities=12% Similarity=0.083 Sum_probs=62.1
Q ss_pred CCCeEEeec----Cchhhhhc----CCCcceeeec----CCchhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEE
Q 037640 254 GRGLVIWDW----APQVLILS----HPSVGGFLTH----CGWNSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVK 321 (398)
Q Consensus 254 ~~~v~~~~~----~pq~~~L~----~~~~~~~ith----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~ 321 (398)
..+|.+.++ +++.++.. .+++ ||.- +--.+++||+++|+|+|+.. -......+ +.-..|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV-~dg~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEII-VHGKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHC-CBTTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHH-ccCCcEEE
Confidence 367888774 44454443 3445 6632 22469999999999999963 33344444 35557887
Q ss_pred eccCCCCCccccccccccccHHHHHHHHHHHh----ccCcchHHHHHHHHHHH
Q 037640 322 IGVENPMTWGEEQNIGVLVKRDDVKNAVERLM----DEGNDGEERRNRALNLA 370 (398)
Q Consensus 322 l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl----~~~~~~~~~~~~a~~l~ 370 (398)
++.. +.+++.++|.+++ .|++..+.+.+++++..
T Consensus 712 v~p~---------------D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 712 IDPY---------------HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp ECTT---------------SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred eCCC---------------CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 7653 7888888887666 78866666666665543
No 52
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.34 E-value=0.13 Score=49.65 Aligned_cols=80 Identities=16% Similarity=0.069 Sum_probs=56.2
Q ss_pred CCeEEeecCchhh---hhcCCCcceeee--c-CCc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCC
Q 037640 255 RGLVIWDWAPQVL---ILSHPSVGGFLT--H-CGW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENP 327 (398)
Q Consensus 255 ~~v~~~~~~pq~~---~L~~~~~~~~it--h-gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~ 327 (398)
.++...+++|+.+ +++.+++ ||. + =|. +.++||+++|+|+|+- ..+ ....+ +.-..|..+..
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v-~~~~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLS-NWHSNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGG-GTBTTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhh-hcCCCEEEeCC---
Confidence 5788889998664 6777777 653 2 133 5789999999999982 222 11233 34346777754
Q ss_pred CCccccccccccccHHHHHHHHHHHhccCc
Q 037640 328 MTWGEEQNIGVLVKRDDVKNAVERLMDEGN 357 (398)
Q Consensus 328 ~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 357 (398)
-+.++|.++|.++++|++
T Consensus 364 ------------~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 364 ------------LNPENIAETLVELCMSFN 381 (413)
T ss_dssp ------------CSHHHHHHHHHHHHHHTC
T ss_pred ------------CCHHHHHHHHHHHHcCHH
Confidence 378999999999998873
No 53
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=93.14 E-value=0.13 Score=49.26 Aligned_cols=78 Identities=12% Similarity=0.022 Sum_probs=57.7
Q ss_pred CCCeEEeecCchh---hhhcCCCcceeeec-CCc-hhHHHHH-------HhCCCEeecccccchhhhHHHHHHHhcceEE
Q 037640 254 GRGLVIWDWAPQV---LILSHPSVGGFLTH-CGW-NSTLEGV-------CAGLPLLTWPLFADQFTNEKLAVHLLKIGVK 321 (398)
Q Consensus 254 ~~~v~~~~~~pq~---~~L~~~~~~~~ith-gG~-~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~ 321 (398)
.++|.+.+++|+. ++++.+++-++-++ -|+ ++++||+ ++|+|+|+... + ..-..|..
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G~l 332 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKSRF 332 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSSEE
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcceEE
Confidence 4689999999865 46888888333232 343 6789999 99999999855 4 34455776
Q ss_pred -eccCCCCCccccccccccccHHHHHHHHHHHhccCc
Q 037640 322 -IGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGN 357 (398)
Q Consensus 322 -l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~ 357 (398)
+... +.+++.++|.++++|++
T Consensus 333 ~v~~~---------------d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 333 GYTPG---------------NADSVIAAITQALEAPR 354 (406)
T ss_dssp EECTT---------------CHHHHHHHHHHHHHCCC
T ss_pred EeCCC---------------CHHHHHHHHHHHHhCcc
Confidence 6543 78999999999998774
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.04 E-value=1.5 Score=43.55 Aligned_cols=138 Identities=13% Similarity=0.007 Sum_probs=70.9
Q ss_pred EEEeeCCcccC-CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHH--HhcCCCeEEeecCchh---hhhc
Q 037640 197 VYACLGSMCNL-IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEE--RIKGRGLVIWDWAPQV---LILS 270 (398)
Q Consensus 197 v~vs~Gs~~~~-~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~v~~~~~~pq~---~~L~ 270 (398)
+++..|..... ..+.+.+.+..+.+.+.++++.-.+... ....+.. ...+.++.+..+.++. .+++
T Consensus 329 ~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 400 (536)
T 3vue_A 329 LIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKK--------FEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMA 400 (536)
T ss_dssp EEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHH--------HHHHHHHHHHHSTTTEEEECSCCHHHHHHHHH
T ss_pred EEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCch--------HHHHHHHHHhhcCCceEEEEeccHHHHHHHHH
Confidence 44556666542 2333333333343456666655333211 1111111 1225677777777754 3677
Q ss_pred CCCcceeeecC---Cc-hhHHHHHHhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHH
Q 037640 271 HPSVGGFLTHC---GW-NSTLEGVCAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVK 346 (398)
Q Consensus 271 ~~~~~~~ithg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~ 346 (398)
.+++ ||.-. |. .+++||+++|+|+|+.... .....| +.-..|........ -|..- ...+.++|.
T Consensus 401 ~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~--~g~l~---~~~d~~~la 468 (536)
T 3vue_A 401 GADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSV--DCKVV---EPSDVKKVA 468 (536)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCS--CTTCC---CHHHHHHHH
T ss_pred hhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCC--ceeEE---CCCCHHHHH
Confidence 7777 65421 32 5899999999999997543 233333 23334443322100 00000 123678899
Q ss_pred HHHHHHhc
Q 037640 347 NAVERLMD 354 (398)
Q Consensus 347 ~ai~~vl~ 354 (398)
++|++++.
T Consensus 469 ~ai~ral~ 476 (536)
T 3vue_A 469 ATLKRAIK 476 (536)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988775
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=89.54 E-value=0.96 Score=42.29 Aligned_cols=97 Identities=8% Similarity=0.082 Sum_probs=59.3
Q ss_pred CCceEEEeeCCccc---CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecC--c-hh
Q 037640 193 PKSVVYACLGSMCN---LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWA--P-QV 266 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--p-q~ 266 (398)
++++|.+.-||... .+.+.+.++++.|.+.+.++++ ++...+.. +-+.+.+......+.+.+-. . -.
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~e~~------~~~~i~~~~~~~~~~l~g~~sl~e~~ 256 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPMDLE------MVQPVVEQMETKPIVATGKFQLGPLA 256 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTTTHH------HHHHHHHTCSSCCEECTTCCCHHHHH
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcchHH------HHHHHHHhcccccEEeeCCCCHHHHH
Confidence 45688888887533 6788899999999877888877 44432211 11222222222223332222 2 33
Q ss_pred hhhcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 267 LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 267 ~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
++++++++ +|+.-... ++=|.+.|+|+|++
T Consensus 257 ali~~a~~--~i~~DsG~-~HlAaa~g~P~v~l 286 (349)
T 3tov_A 257 AAMNRCNL--LITNDSGP-MHVGISQGVPIVAL 286 (349)
T ss_dssp HHHHTCSE--EEEESSHH-HHHHHTTTCCEEEE
T ss_pred HHHHhCCE--EEECCCCH-HHHHHhcCCCEEEE
Confidence 68888888 99984333 33388899999996
No 56
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=86.45 E-value=11 Score=36.91 Aligned_cols=108 Identities=12% Similarity=0.066 Sum_probs=67.3
Q ss_pred CeEEeecCchh---hhhcCCCcceeee---cCCch-hHHHHHHhC---CCEeecccccchhhhHHHHHHHhc-ceEEecc
Q 037640 256 GLVIWDWAPQV---LILSHPSVGGFLT---HCGWN-STLEGVCAG---LPLLTWPLFADQFTNEKLAVHLLK-IGVKIGV 324 (398)
Q Consensus 256 ~v~~~~~~pq~---~~L~~~~~~~~it---hgG~~-s~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~~g-~g~~l~~ 324 (398)
.|+....+|+. .++..+++ |+. +=|+| ..+|++++| .|+|+--+.+ .+. .+| -|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~----~l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAE----VLGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THH----HHGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHH----HhCCCEEEECC
Confidence 57777788865 45666776 543 45887 568999996 5655543332 222 333 4777765
Q ss_pred CCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 325 ENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
-+.++++++|.++|+++. ++-+++.+++.+.++ ..+...-.+.+++.|.
T Consensus 423 ---------------~D~~~lA~AI~~aL~m~~--~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 ---------------FDLVEQAEAISAALAAGP--RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLA 471 (496)
T ss_dssp ---------------TBHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHH
T ss_pred ---------------CCHHHHHHHHHHHHcCCH--HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHh
Confidence 388999999999998652 133344444444432 4555566667777664
No 57
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=83.00 E-value=2.8 Score=38.63 Aligned_cols=97 Identities=9% Similarity=0.079 Sum_probs=58.6
Q ss_pred CCceEEEeeCC-c-c--cCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhc---CCCeE-EeecCc
Q 037640 193 PKSVVYACLGS-M-C--NLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIK---GRGLV-IWDWAP 264 (398)
Q Consensus 193 ~~~vv~vs~Gs-~-~--~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~v~-~~~~~p 264 (398)
++++|.+.-|| . . ..+.+.+.++++.|.+.+.++++. +...+.. +-+.+.+... ..+++ +.+..+
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~e~~------~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAKDHE------AGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGGGHH------HHHHHHTTSCHHHHTTEEECTTTSC
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChhhHH------HHHHHHHhhhhccccceEeccCcCC
Confidence 44588888888 3 2 267888999999998778888774 3332111 1111111100 01332 223222
Q ss_pred ---hhhhhcCCCcceeeecCCchhHHHHHHhCCCEeec
Q 037640 265 ---QVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW 299 (398)
Q Consensus 265 ---q~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~ 299 (398)
-.++++++++ +|+.- .|.++-|.+.|+|+|++
T Consensus 252 l~e~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 252 LDQAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2468989888 99974 34466688999999986
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=82.73 E-value=0.7 Score=42.50 Aligned_cols=136 Identities=12% Similarity=-0.029 Sum_probs=76.3
Q ss_pred CCceEEEeeCCccc---CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeec--Cch-h
Q 037640 193 PKSVVYACLGSMCN---LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDW--APQ-V 266 (398)
Q Consensus 193 ~~~vv~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~--~pq-~ 266 (398)
++++|.+.-|+... .+.+.+.++++.|.+.+.++++..+...+.. +-+.+.+. -+++.+.+- +.+ .
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~------~~~~i~~~--~~~~~l~g~~sl~el~ 248 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEE------RAKRLAEG--FAYVEVLPKMSLEGVA 248 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHH------HHHHHHTT--CTTEEECCCCCHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHH------HHHHHHhh--CCcccccCCCCHHHHH
Confidence 34577787777543 6788899999988777788776544321110 11111111 124433332 223 3
Q ss_pred hhhcCCCcceeeecCCchhHHHHHHhCCCEeec--ccccchhhhHHHHHHHhcce-EEec-cCCCCCccccccccccccH
Q 037640 267 LILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTW--PLFADQFTNEKLAVHLLKIG-VKIG-VENPMTWGEEQNIGVLVKR 342 (398)
Q Consensus 267 ~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~~g~g-~~l~-~~~~~~~~~~~~~~~~~~~ 342 (398)
++++++++ +|+.-....-+ |.+.|+|+|++ |. +..+. .=+|-. ..+. ...+| ..++.
T Consensus 249 ali~~a~l--~I~~DSG~~Hl-Aaa~g~P~v~lfg~t------~p~~~-~P~~~~~~~~~~~~~cm---------~~I~~ 309 (326)
T 2gt1_A 249 RVLAGAKF--VVSVDTGLSHL-TAALDRPNITVYGPT------DPGLI-GGYGKNQMVCRAPGNEL---------SQLTA 309 (326)
T ss_dssp HHHHTCSE--EEEESSHHHHH-HHHTTCCEEEEESSS------CHHHH-CCCSSSEEEEECGGGCG---------GGCCH
T ss_pred HHHHhCCE--EEecCCcHHHH-HHHcCCCEEEEECCC------Chhhc-CCCCCCceEecCCcccc---------cCCCH
Confidence 68889888 99994333333 66699999998 32 11111 011111 1111 11111 25899
Q ss_pred HHHHHHHHHHhcc
Q 037640 343 DDVKNAVERLMDE 355 (398)
Q Consensus 343 ~~l~~ai~~vl~~ 355 (398)
+++.+++.+++.+
T Consensus 310 ~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 310 NAVKQFIEENAEK 322 (326)
T ss_dssp HHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
No 59
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=80.15 E-value=2.2 Score=37.19 Aligned_cols=159 Identities=11% Similarity=0.001 Sum_probs=77.8
Q ss_pred hhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecC
Q 037640 184 CLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWA 263 (398)
Q Consensus 184 ~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 263 (398)
++-|++-.+ +.+++|..|.++ ...++.|.+.+..+.+.... +.+.+.......++......
T Consensus 23 ~Pifl~L~g-k~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----------~~~~l~~l~~~~~i~~i~~~ 83 (223)
T 3dfz_A 23 YTVMLDLKG-RSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----------VSAEINEWEAKGQLRVKRKK 83 (223)
T ss_dssp CEEEECCTT-CCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----------CCHHHHHHHHTTSCEEECSC
T ss_pred cccEEEcCC-CEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----------CCHHHHHHHHcCCcEEEECC
Confidence 444566543 448888776444 45566677778887766432 22222222223344433222
Q ss_pred chhhhhcCCCcceeeecCCchhHHHHHHhCCCEeecccc-cchhhhHHHHH----HHhcceEEeccCCCCCccccccccc
Q 037640 264 PQVLILSHPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLF-ADQFTNEKLAV----HLLKIGVKIGVENPMTWGEEQNIGV 338 (398)
Q Consensus 264 pq~~~L~~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~-~DQ~~na~~v~----~~~g~g~~l~~~~~~~~~~~~~~~~ 338 (398)
-+...|..+.+ +|.--|--.+.+.++.-.- ..+|+. .|.+..+.-+. ++-++-+.+... |..
T Consensus 84 ~~~~dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~----------G~s 150 (223)
T 3dfz_A 84 VGEEDLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTD----------GAS 150 (223)
T ss_dssp CCGGGSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECT----------TSC
T ss_pred CCHhHhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECC----------CCC
Confidence 22334555555 7777776655555544222 333332 24443321110 111122222221 112
Q ss_pred cccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Q 037640 339 LVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMA 376 (398)
Q Consensus 339 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~ 376 (398)
-.-...|++.|.+.+ ++....+-+.+.++++.++..
T Consensus 151 P~la~~iR~~ie~~l--p~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 151 PLLTKRIKEDLSSNY--DESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHHHHS--CTHHHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHH
Confidence 244567778887777 444556777888888887754
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=76.72 E-value=3.5 Score=42.03 Aligned_cols=43 Identities=16% Similarity=0.190 Sum_probs=29.7
Q ss_pred eecCchh---------hhhcCCCcceeee-cCCc-hhHHHHHHhCCCEeecccc
Q 037640 260 WDWAPQV---------LILSHPSVGGFLT-HCGW-NSTLEGVCAGLPLLTWPLF 302 (398)
Q Consensus 260 ~~~~pq~---------~~L~~~~~~~~it-hgG~-~s~~eal~~GvP~l~~P~~ 302 (398)
-.|++.. ++++.+.+-++-+ +=|+ .+.+||+++|+|+|+.-..
T Consensus 498 P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 498 PEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred ccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 3577664 4687888833333 2333 5899999999999996554
No 61
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=73.43 E-value=38 Score=28.00 Aligned_cols=101 Identities=13% Similarity=-0.040 Sum_probs=55.1
Q ss_pred hhhhhhhcCCCCCceEEEeeCC-cccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEe
Q 037640 182 HKCLKWLDSKDPKSVVYACLGS-MCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIW 260 (398)
Q Consensus 182 ~~~~~~l~~~~~~~vv~vs~Gs-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 260 (398)
.++-++|.+. ++.+||.|. .. ...+..++..+.+-++|=++... ... .+... -...++.
T Consensus 35 ~~lg~~La~~---g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-~~~------~~~~~-----~~~~i~~ 94 (176)
T 2iz6_A 35 NELGKQIATH---GWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-DTS------EISDA-----VDIPIVT 94 (176)
T ss_dssp HHHHHHHHHT---TCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------------CCTT-----CSEEEEC
T ss_pred HHHHHHHHHC---CCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-hhh------hhccC-----CceeEEc
Confidence 4566666554 256677766 44 33445555555555665555321 100 11100 0123445
Q ss_pred ecCchh-hhhcCCCcceeeecCCchhHHHH---HHhCCCEeecccc
Q 037640 261 DWAPQV-LILSHPSVGGFLTHCGWNSTLEG---VCAGLPLLTWPLF 302 (398)
Q Consensus 261 ~~~pq~-~~L~~~~~~~~ithgG~~s~~ea---l~~GvP~l~~P~~ 302 (398)
+.+++. .++..-+-..++--||.||+.|+ +.+++|++.+|.+
T Consensus 95 ~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 95 GLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 555544 34444444456677888876655 6799999999984
No 62
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=70.51 E-value=11 Score=36.68 Aligned_cols=107 Identities=20% Similarity=0.170 Sum_probs=62.5
Q ss_pred eE-EeecCchhh---hhcCCCcceeee---cCCch-hHHHHHHhCC-----CEeecccccchhhhHHHHHHHhcceEEec
Q 037640 257 LV-IWDWAPQVL---ILSHPSVGGFLT---HCGWN-STLEGVCAGL-----PLLTWPLFADQFTNEKLAVHLLKIGVKIG 323 (398)
Q Consensus 257 v~-~~~~~pq~~---~L~~~~~~~~it---hgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~~g~g~~l~ 323 (398)
++ +.+++++.+ +++.+++ ||. +=|+| ++.||+++|+ |+|+--+.+ .+. ...-|..++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~----~l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN----ELTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG----TCTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHH----HhCCeEEEC
Confidence 44 457788765 5666777 654 33664 8999999998 666654332 111 112466665
Q ss_pred cCCCCCccccccccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 037640 324 VENPMTWGEEQNIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIM 395 (398)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 395 (398)
. -+.+++.++|.+++++++. ..+++.++.++.++ + -+...-.+++++.+.
T Consensus 403 p---------------~d~~~lA~ai~~lL~~~~~--~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~ 452 (482)
T 1uqt_A 403 P---------------YDRDEVAAALDRALTMSLA--ERISRHAEMLDVIV----K-NDINHWQECFISDLK 452 (482)
T ss_dssp T---------------TCHHHHHHHHHHHHTCCHH--HHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHH
T ss_pred C---------------CCHHHHHHHHHHHHcCCHH--HHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHH
Confidence 4 3789999999999985421 12223333333332 2 344455566666554
No 63
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=64.09 E-value=5.5 Score=30.94 Aligned_cols=38 Identities=26% Similarity=0.209 Sum_probs=27.8
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc---CCCeEEE
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF---NVPRIAF 59 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l---gIP~v~~ 59 (398)
....+.+++ .+||+||.|..++ -|..+++.+ ++|.|.+
T Consensus 43 ~eAl~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 43 QEALDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 344456666 7999999999886 566776654 7897765
No 64
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=58.54 E-value=12 Score=29.33 Aligned_cols=40 Identities=8% Similarity=0.242 Sum_probs=29.3
Q ss_pred HHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-------CCCeEEEechh
Q 037640 22 VENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-------NVPRIAFHGTC 63 (398)
Q Consensus 22 l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-------gIP~v~~~~~~ 63 (398)
..+.+++ .+||+||.|..++ -|..+++.+ ++|.|.++...
T Consensus 49 al~~~~~--~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 49 ALPMLKK--GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred HHHHHHh--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 3445555 6999999999886 677777665 48988876543
No 65
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=53.95 E-value=22 Score=26.50 Aligned_cols=40 Identities=15% Similarity=0.296 Sum_probs=27.9
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-------CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-------NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 62 (398)
...+.+++ .+||+||.|..++ -|..+.+.+ ++|.+.++..
T Consensus 37 ~al~~l~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 37 IALEKLSE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHHHTT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHHHh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 44445556 7899999998775 466666554 5888887654
No 66
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=46.39 E-value=33 Score=26.06 Aligned_cols=41 Identities=20% Similarity=0.340 Sum_probs=28.0
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-------CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-------NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|..++ -|..+.+.+ ++|.+.++..
T Consensus 38 ~~al~~~~~--~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 38 EEALQQIYK--NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECT
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecC
Confidence 344455666 7999999998775 455555443 5888887654
No 67
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=46.13 E-value=47 Score=31.95 Aligned_cols=154 Identities=10% Similarity=-0.027 Sum_probs=75.6
Q ss_pred hhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchh
Q 037640 187 WLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQV 266 (398)
Q Consensus 187 ~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~ 266 (398)
|++-. .+.+++|..|..+ ...++.|.+.+..+.+.-.. +.+.+.+.....++.+..---+.
T Consensus 7 ~~~l~-~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~-----------~~~~~~~l~~~~~i~~~~~~~~~ 67 (457)
T 1pjq_A 7 FCQLR-DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT-----------FIPQFTVWANEGMLTLVEGPFDE 67 (457)
T ss_dssp EECCB-TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS-----------CCHHHHHHHTTTSCEEEESSCCG
T ss_pred EEECC-CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC-----------CCHHHHHHHhcCCEEEEECCCCc
Confidence 44433 3447777776644 34456666778877665432 22222222222344332211122
Q ss_pred hhhcCCCcceeeecCCchh-----HHHHHHhCCCE--eecccccchhhhHHHHH-HHhcceEEeccCCCCCccccccccc
Q 037640 267 LILSHPSVGGFLTHCGWNS-----TLEGVCAGLPL--LTWPLFADQFTNEKLAV-HLLKIGVKIGVENPMTWGEEQNIGV 338 (398)
Q Consensus 267 ~~L~~~~~~~~ithgG~~s-----~~eal~~GvP~--l~~P~~~DQ~~na~~v~-~~~g~g~~l~~~~~~~~~~~~~~~~ 338 (398)
..|....+ +|.--|.-. ..+|-..|+|+ +--|-..+...-+ .+. ...-+|+. ... ..
T Consensus 68 ~~l~~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIs-T~G-----------ks 132 (457)
T 1pjq_A 68 TLLDSCWL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVS-SGG-----------TS 132 (457)
T ss_dssp GGGTTCSE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEE-CTT-----------SC
T ss_pred cccCCccE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEE-CCC-----------CC
Confidence 33445554 777777543 33455668886 3333333322100 000 02233444 111 01
Q ss_pred cccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Q 037640 339 LVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMA 376 (398)
Q Consensus 339 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~ 376 (398)
..-...|++.|.+.+. +....+-+.+.++++.++..
T Consensus 133 p~la~~ir~~ie~~l~--~~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 133 PVLARLLREKLESLLP--QHLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHHHHHHHSC--TTHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcc--hhHHHHHHHHHHHHHHHHhh
Confidence 2336778888888884 33446677777777777654
No 68
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=45.62 E-value=25 Score=27.07 Aligned_cols=40 Identities=13% Similarity=0.314 Sum_probs=27.4
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc---------CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF---------NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l---------gIP~v~~~~~ 62 (398)
...+.+++ .+||+||.|..++ -|..+.+.+ .+|.+.++..
T Consensus 49 ~al~~~~~--~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 49 QVLDAMAE--EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 44455566 7999999998765 466666554 2788877553
No 69
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=43.19 E-value=35 Score=29.41 Aligned_cols=41 Identities=12% Similarity=0.167 Sum_probs=29.2
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCccc---H----HHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPY---T----AQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~---~----~~vA~~lgIP~v~~ 59 (398)
.+.+.++++++..+||+|++|..... . ..+.-.+++|+|..
T Consensus 90 ~P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 90 GPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred hHHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 35666777776678999999987544 3 33445558999975
No 70
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=42.62 E-value=40 Score=24.77 Aligned_cols=41 Identities=20% Similarity=0.461 Sum_probs=27.6
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHH----cCCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGK----FNVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~----lgIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -|..+.+. .++|.+.++..
T Consensus 36 ~~al~~~~~--~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 36 NEAVEMVEE--LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp HHHHHHHHT--TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred HHHHHHHhh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 344455566 7999999998775 35555543 36888877654
No 71
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=42.16 E-value=38 Score=29.45 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=29.4
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcc-------cHHHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLP-------YTAQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~-------~~~~vA~~lgIP~v~~ 59 (398)
.+.+.++++++..+||++++|-... -|..+.-.+|+|+|..
T Consensus 94 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 94 IPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 3566777777667899999998653 2445556678999975
No 72
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=40.80 E-value=2e+02 Score=25.76 Aligned_cols=110 Identities=6% Similarity=-0.020 Sum_probs=60.3
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCc
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSV 274 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~ 274 (398)
+.+|..|.++. ..+.++.+. +..++.+...+.. -.+.+.++. ++ ..-+-...++|..+.+
T Consensus 8 igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~--------~~~~~~~~~---~~-~~~~~~~~~ll~~~~~ 68 (330)
T 3e9m_A 8 YGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRRLE--------NAQKMAKEL---AI-PVAYGSYEELCKDETI 68 (330)
T ss_dssp EEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSSSH--------HHHHHHHHT---TC-CCCBSSHHHHHHCTTC
T ss_pred EEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCCHH--------HHHHHHHHc---CC-CceeCCHHHHhcCCCC
Confidence 67788887762 456667664 4555555443321 011122221 21 0124556778887666
Q ss_pred ceeeecCCc----hhHHHHHHhCCCEee-ccccc--chhhhHHHHHHHhcceEEecc
Q 037640 275 GGFLTHCGW----NSTLEGVCAGLPLLT-WPLFA--DQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 275 ~~~ithgG~----~s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~g~g~~l~~ 324 (398)
.+++--.-. .-+.+|+.+|+++++ -|+.. ++......++++.|+-+.+..
T Consensus 69 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~ 125 (330)
T 3e9m_A 69 DIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQ 125 (330)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 656543333 346788999999887 56553 444444444456666555544
No 73
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=38.73 E-value=53 Score=29.75 Aligned_cols=50 Identities=4% Similarity=-0.070 Sum_probs=30.2
Q ss_pred hhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeC
Q 037640 182 HKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIRE 232 (398)
Q Consensus 182 ~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 232 (398)
+++..+++. +-++|-+-..+....++.+.+..+.+.+++.+.++++-.+.
T Consensus 131 ~el~~~~~~-g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 131 KEASRAVAA-GHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHH-TCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHc-CCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 566666632 22333222222122355677888999999999998877654
No 74
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.93 E-value=53 Score=28.27 Aligned_cols=29 Identities=7% Similarity=0.084 Sum_probs=24.2
Q ss_pred cceeeecCCchhHHHHHHhCCCEeeccccc
Q 037640 274 VGGFLTHCGWNSTLEGVCAGLPLLTWPLFA 303 (398)
Q Consensus 274 ~~~~ithgG~~s~~eal~~GvP~l~~P~~~ 303 (398)
+.++|+.||-....... .++|+|-++..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 45599999998888875 589999999864
No 75
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=37.24 E-value=52 Score=25.48 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-------CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-------NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+.+ ++|.|+++..
T Consensus 41 ~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (154)
T 3gt7_A 41 REAVRFLSL--TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTIL 90 (154)
T ss_dssp HHHHHHHTT--CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECC
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECC
Confidence 344555666 7899999998764 455555433 5788877643
No 76
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=37.01 E-value=1.1e+02 Score=27.60 Aligned_cols=59 Identities=7% Similarity=0.067 Sum_probs=38.4
Q ss_pred ecCchhhhhcCCCcceeeecCCch----hHHHHHHhCCCEee-cccccc--hhhhHHHHHHHhcce
Q 037640 261 DWAPQVLILSHPSVGGFLTHCGWN----STLEGVCAGLPLLT-WPLFAD--QFTNEKLAVHLLKIG 319 (398)
Q Consensus 261 ~~~pq~~~L~~~~~~~~ithgG~~----s~~eal~~GvP~l~-~P~~~D--Q~~na~~v~~~~g~g 319 (398)
-|-...++|..+.+.+++--.-.. -+.+|+.+|++++| =|+..+ +..-...++++.|.-
T Consensus 55 ~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 55 KYNNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp ECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred ccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence 366778888876666655433333 37789999999888 587653 444444444566655
No 77
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=36.91 E-value=53 Score=27.78 Aligned_cols=48 Identities=10% Similarity=-0.052 Sum_probs=34.1
Q ss_pred hhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEE
Q 037640 182 HKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWV 229 (398)
Q Consensus 182 ~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 229 (398)
+-+.+|+.....+.++||-.+|......+.+..+.++|++.|..+.+.
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 445567644444569999988775444567888999999999876654
No 78
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=36.78 E-value=54 Score=24.71 Aligned_cols=41 Identities=10% Similarity=0.278 Sum_probs=27.0
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-------CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-------NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -|..+.+.+ .+|.+.++..
T Consensus 37 ~~al~~l~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 37 EECLEALNA--TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHHHHHhc--cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 344455666 7899999998765 455555443 4788876543
No 79
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=36.77 E-value=61 Score=23.82 Aligned_cols=41 Identities=17% Similarity=0.398 Sum_probs=27.5
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 37 ~~~~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (126)
T 1dbw_A 37 EAFLAFAPD--VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGH 84 (126)
T ss_dssp HHHHHHGGG--CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred HHHHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECC
Confidence 344455556 7899999998764 455555443 5888887654
No 80
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=36.51 E-value=43 Score=30.75 Aligned_cols=73 Identities=21% Similarity=0.223 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHH
Q 037640 208 IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTL 287 (398)
Q Consensus 208 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~ 287 (398)
+.+....+.+++.....+.||..++.... ..+.++++...+-++|+. ||=+.-...++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL~ 120 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYNS--------------------NGLLKYLDYDLIRENPKF--FCGYSDITALN 120 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG--------------------GGGGGGCCHHHHHTSCCE--EEECGGGHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH--------------------HHHHhhcChhHHHhCCeE--EEEecchHHHH
Confidence 35567789999999999999998776421 123345555555567766 88887777777
Q ss_pred HHHH--hCCCEeecccc
Q 037640 288 EGVC--AGLPLLTWPLF 302 (398)
Q Consensus 288 eal~--~GvP~l~~P~~ 302 (398)
-+++ .|+..+.-|..
T Consensus 121 ~al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 121 NAIYTKTGLVTYSGPHF 137 (331)
T ss_dssp HHHHHHHCBCEEECCCG
T ss_pred HHHHHhhCCcEEEccch
Confidence 7776 48887777763
No 81
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.41 E-value=45 Score=27.95 Aligned_cols=32 Identities=6% Similarity=0.176 Sum_probs=26.1
Q ss_pred CCCcceeeecCCchhHHHHHHhCCCEeeccccc
Q 037640 271 HPSVGGFLTHCGWNSTLEGVCAGLPLLTWPLFA 303 (398)
Q Consensus 271 ~~~~~~~ithgG~~s~~eal~~GvP~l~~P~~~ 303 (398)
...+.++|+.||-....... .++|+|-+|..+
T Consensus 49 ~~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 49 QDEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred cCCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 34555699999998888875 689999999875
No 82
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=33.33 E-value=78 Score=23.38 Aligned_cols=41 Identities=24% Similarity=0.325 Sum_probs=26.4
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-------CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-------NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 37 ~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 37 ASGLQQALA--HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHHHHHH--SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 344455666 7899999998764 455444322 5788876543
No 83
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=32.25 E-value=37 Score=32.71 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=28.2
Q ss_pred HHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 21 PVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
++++++++ .++|++|.... +..+|+++|||++.+
T Consensus 366 ~le~~i~~--~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARA--GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 56778888 79999998744 678999999999964
No 84
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=32.15 E-value=69 Score=24.51 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ .+..+.+.+ ++|.|+++..
T Consensus 56 ~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 103 (150)
T 4e7p_A 56 QEAIQLLEK--ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTF 103 (150)
T ss_dssp HHHHHHHTT--SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHhhc--cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCC
Confidence 344455556 7899999998764 455555543 5888877654
No 85
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=32.06 E-value=67 Score=23.71 Aligned_cols=41 Identities=20% Similarity=0.409 Sum_probs=25.1
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ .+..+.+.+ ++|.+.++..
T Consensus 41 ~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~ 88 (130)
T 3eod_A 41 VDALELLGG--FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISAT 88 (130)
T ss_dssp HHHHHHHTT--CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECC
T ss_pred HHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 344455556 7899999998654 344444432 5888887654
No 86
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=32.01 E-value=70 Score=23.97 Aligned_cols=41 Identities=7% Similarity=0.138 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-------CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-------NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ .+..+.+.+ ++|.++++..
T Consensus 40 ~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 89 (140)
T 3grc_A 40 AQALEQVAR--RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSAN 89 (140)
T ss_dssp HHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTT
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecC
Confidence 344556666 7899999998764 455554432 5788876554
No 87
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=31.98 E-value=2.7e+02 Score=25.13 Aligned_cols=110 Identities=16% Similarity=0.065 Sum_probs=61.3
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHHhC--CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCC
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLEAS--NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHP 272 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~ 272 (398)
.+.+|..|.++. ..+.++.+. +..++.....+.. -.+.+.++. ++ ..+-...++|..+
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~~--------~~~~~~~~~---~~--~~~~~~~~ll~~~ 74 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDPA--------ALKAAVERT---GA--RGHASLTDMLAQT 74 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSHH--------HHHHHHHHH---CC--EEESCHHHHHHHC
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCHH--------HHHHHHHHc---CC--ceeCCHHHHhcCC
Confidence 378888888773 355666665 4566655543311 011122221 33 2355667788766
Q ss_pred CcceeeecCC----chhHHHHHHhCCCEee-ccccc--chhhhHHHHHHHhcceEEecc
Q 037640 273 SVGGFLTHCG----WNSTLEGVCAGLPLLT-WPLFA--DQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 273 ~~~~~ithgG----~~s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~g~g~~l~~ 324 (398)
.+.+++--.- ..-+.+++.+|+++++ -|+.. ++-.....++++.|+-+.+..
T Consensus 75 ~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~ 133 (354)
T 3q2i_A 75 DADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVK 133 (354)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEE
Confidence 5555553222 2346778999999988 57654 344344444456676665544
No 88
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=31.64 E-value=91 Score=22.26 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=26.7
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 35 ~~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 35 EEALKKFFS--GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 344455556 7899999998764 455555443 4788776543
No 89
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=31.63 E-value=51 Score=28.80 Aligned_cols=40 Identities=15% Similarity=0.113 Sum_probs=28.1
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc-------cHHHHHHHcCCCeEEE
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP-------YTAQIAGKFNVPRIAF 59 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~-------~~~~vA~~lgIP~v~~ 59 (398)
+.+.++++.+..+||++++|-... -|..+.-.+++|+|..
T Consensus 97 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 97 PLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 556666666667899999997643 2444555667999975
No 90
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=31.59 E-value=69 Score=24.59 Aligned_cols=42 Identities=14% Similarity=0.221 Sum_probs=28.1
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEechh
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGTC 63 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~~ 63 (398)
....+.+++ .+||+||.|...+ -+..+.+.+ ++|.|+++...
T Consensus 41 ~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 41 LDALEALKG--TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHTT--SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 345555666 7899999998764 455555443 58888876654
No 91
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=31.59 E-value=2.3e+02 Score=23.64 Aligned_cols=98 Identities=9% Similarity=-0.040 Sum_probs=55.6
Q ss_pred hhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEe
Q 037640 181 EHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIW 260 (398)
Q Consensus 181 ~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 260 (398)
..++-++|.+.+ +.+||.|... ...+..++..+.+-++|=++... .. ... ...+.+.
T Consensus 47 A~~lg~~LA~~G---~~vVsGg~~G-----iM~aa~~gAl~~GG~~iGVlP~e-~~-------~~~-------~~~~~~~ 103 (195)
T 1rcu_A 47 CLELGRTLAKKG---YLVFNGGRDG-----VMELVSQGVREAGGTVVGILPDE-EA-------GNP-------YLSVAVK 103 (195)
T ss_dssp HHHHHHHHHHTT---CEEEECCSSH-----HHHHHHHHHHHTTCCEEEEESTT-CC-------CCT-------TCSEEEE
T ss_pred HHHHHHHHHHCC---CEEEeCCHHH-----HHHHHHHHHHHcCCcEEEEeCCc-cc-------CCC-------Ccceeee
Confidence 355666776542 5666644433 34455555555565666665432 11 110 1233333
Q ss_pred --ecCc-hhhhhcCCCcceeeecCCchhHHHH---HHhCCCEeeccc
Q 037640 261 --DWAP-QVLILSHPSVGGFLTHCGWNSTLEG---VCAGLPLLTWPL 301 (398)
Q Consensus 261 --~~~p-q~~~L~~~~~~~~ithgG~~s~~ea---l~~GvP~l~~P~ 301 (398)
..++ .+.++..-+-..++--||.||+.|+ +.+|+|+++++.
T Consensus 104 ~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 104 TGLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp CCCCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred cCCCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 2344 4455555555567778998877664 779999999973
No 92
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=31.47 E-value=60 Score=24.29 Aligned_cols=41 Identities=20% Similarity=0.254 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc---cHHHHHHH----cCCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP---YTAQIAGK----FNVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~---~~~~vA~~----lgIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ .+..+.+. -++|.|+++..
T Consensus 44 ~~a~~~~~~--~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~ 91 (140)
T 3cg0_A 44 EEAVRCAPD--LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSS 91 (140)
T ss_dssp HHHHHHHHH--HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECC
T ss_pred HHHHHHHHh--CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecC
Confidence 344455555 6899999997653 35555444 37898887654
No 93
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=31.07 E-value=79 Score=26.39 Aligned_cols=30 Identities=10% Similarity=-0.064 Sum_probs=25.1
Q ss_pred CCCcEEEECCCcccHHHHHHHcCCCeEEEechh
Q 037640 31 PQPNCIISDVCLPYTAQIAGKFNVPRIAFHGTC 63 (398)
Q Consensus 31 ~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~~~ 63 (398)
.++|+||.|. ....+|+++|+|.+.+.++.
T Consensus 141 ~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 141 ENIKIVVSGK---TVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp TTCCEEEECH---HHHHHHHHTTCEEEECCCCH
T ss_pred CCCeEEECCH---HHHHHHHHcCCcEEEEecCH
Confidence 6999999884 46789999999999987643
No 94
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=30.80 E-value=73 Score=23.77 Aligned_cols=42 Identities=10% Similarity=0.256 Sum_probs=27.9
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc-------cHHHHHHHc-----CCCeEEEechh
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP-------YTAQIAGKF-----NVPRIAFHGTC 63 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~-------~~~~vA~~l-----gIP~v~~~~~~ 63 (398)
....+.+++ .+||+||.|...+ .+..+.+.+ ++|.|+++...
T Consensus 37 ~~a~~~l~~--~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 37 VSLSTVLRE--ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp HHHHHHHHH--SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred HHHHHHHHc--CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 445556666 7899999997654 344444433 68988876653
No 95
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=30.72 E-value=37 Score=29.87 Aligned_cols=38 Identities=21% Similarity=0.399 Sum_probs=25.4
Q ss_pred HHHHHhhcCCCCcEEEE----------CCCccc---HHHHHHHcCCCeEEEec
Q 037640 22 VENLFGQLKPQPNCIIS----------DVCLPY---TAQIAGKFNVPRIAFHG 61 (398)
Q Consensus 22 l~~~L~~~~~~~D~VI~----------D~~~~~---~~~vA~~lgIP~v~~~~ 61 (398)
+..++.+ .+||+||+ |.+... |..-|..+|||.|.++.
T Consensus 77 l~~~l~~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 77 YRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hhhhcCC--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 3344555 68999998 544443 33345668999999864
No 96
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=30.70 E-value=67 Score=23.24 Aligned_cols=41 Identities=12% Similarity=0.229 Sum_probs=27.1
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEechh
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGTC 63 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~~ 63 (398)
...+.+++ .+||+||.|...+ .+..+.+.+ ++|.+.++...
T Consensus 38 ~a~~~~~~--~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 38 EAVEKYKE--LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp HHHHHHHH--HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred HHHHHHHh--cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 34445555 6899999998765 455555543 58888776543
No 97
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=30.22 E-value=54 Score=27.38 Aligned_cols=65 Identities=15% Similarity=0.146 Sum_probs=36.4
Q ss_pred HHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhcc-Ccc--hHHHHHHHHHHHHHHHH----HHhcCCchH
Q 037640 312 AVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMDE-GND--GEERRNRALNLAKMAKM----AIQEGGSSH 384 (398)
Q Consensus 312 v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~~-~~~--~~~~~~~a~~l~~~~~~----~~~~~g~~~ 384 (398)
..+..|+|+. +|+|+|.++|.+++.. .+. .+.|+ |.-.+-..+|. .|.++..--
T Consensus 107 Fe~~cGVGV~------------------VT~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK 167 (187)
T 3tl4_X 107 MNENSGVGIE------------------ITEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFK 167 (187)
T ss_dssp HHHTTTTTCC------------------CCHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHH
T ss_pred HHHHCCCCeE------------------eCHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHH
Confidence 3367888873 5889999999998852 111 12344 55555555543 233444444
Q ss_pred HHHHHHHHHHH
Q 037640 385 LNITLLLQDIM 395 (398)
Q Consensus 385 ~~~~~~~~~~~ 395 (398)
..+++-+-++.
T Consensus 168 ~~vD~~~l~lL 178 (187)
T 3tl4_X 168 PIIDQEVLKLL 178 (187)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 45554444443
No 98
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=29.81 E-value=77 Score=22.95 Aligned_cols=41 Identities=17% Similarity=0.286 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+.+ .+|.+.++..
T Consensus 36 ~~~~~~~~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 36 AGLREIMQN--QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHHHhc--CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 344555666 7899999998764 455555554 4777776554
No 99
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=29.68 E-value=23 Score=32.86 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=25.3
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCC
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREG 233 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 233 (398)
|++.+.||.+...+ ..+++++|++.++.|+|.....
T Consensus 5 i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~~ 40 (365)
T 3s2u_A 5 VLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTPR 40 (365)
T ss_dssp EEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECCc
Confidence 67776777653221 3468899999999999986544
No 100
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=29.66 E-value=67 Score=28.51 Aligned_cols=119 Identities=13% Similarity=0.085 Sum_probs=63.1
Q ss_pred HHHHHHHHhhcCCceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCC---cccCCHHHHHHHH
Q 037640 140 PAYVKEYKKISRDKAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGS---MCNLIPSQMMELG 216 (398)
Q Consensus 140 ~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs---~~~~~~~~~~~~~ 216 (398)
-.++....+..|.+++.++.+.+..... ..+++.. +...+=.++-+. .+. ....+.+.+..+.
T Consensus 79 N~~~~~~~~~~p~r~~~~~~v~p~~~~~------------a~~eL~~-~~~~g~~Gi~~~-~~~~~~~~~~~d~~~~~~~ 144 (291)
T 3irs_A 79 NADVAAVAKAYPDKFHPVGSIEAATRKE------------AMAQMQE-ILDLGIRIVNLE-PGVWATPMHVDDRRLYPLY 144 (291)
T ss_dssp HHHHHHHHHHSTTTEEEEEECCCSSHHH------------HHHHHHH-HHHTTCCCEEEC-GGGSSSCCCTTCGGGHHHH
T ss_pred HHHHHHHHHHCCCcEEEEEecCccCHHH------------HHHHHHH-HHhCCCeEEEEe-CCCCCCCCCCCCHHHHHHH
Confidence 3444445555655677666654432111 0245555 443332333322 222 1224556778899
Q ss_pred HHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhh-hcCCCcceeeecCCchhHHHHHH
Q 037640 217 LGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLI-LSHPSVGGFLTHCGWNSTLEGVC 291 (398)
Q Consensus 217 ~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~-L~~~~~~~~ithgG~~s~~eal~ 291 (398)
+.+++.+.+|+.-.+...... .. + .+ -..-..+ -.+|.+++++.|||+....+++.
T Consensus 145 ~~a~e~glpv~iH~~~~~~~~------~~--~------~~-----p~~~~~v~~~~P~l~ivl~H~G~~~~~~~~~ 201 (291)
T 3irs_A 145 AFCEDNGIPVIMMTGGNAGPD------IT--Y------TN-----PEHIDRVLGDFPDLTVVSSHGNWPWVQEIIH 201 (291)
T ss_dssp HHHHHTTCCEEEECSSSCSSS------GG--G------GC-----HHHHHHHHHHCTTCCEEEEGGGTTCHHHHHH
T ss_pred HHHHHcCCeEEEeCCCCCCCC------Cc--c------CC-----HHHHHHHHHHCCCCEEEeecCCcccHHHHHH
Confidence 999999999887765431000 00 0 00 0001222 35789999999999877666655
No 101
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=29.53 E-value=66 Score=24.72 Aligned_cols=41 Identities=20% Similarity=0.347 Sum_probs=27.6
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ .+..+.+.+ ++|.|+++..
T Consensus 48 ~~a~~~l~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 95 (153)
T 3hv2_A 48 TQALQLLAS--REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGD 95 (153)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHc--CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECC
Confidence 344556666 7899999998764 455555443 5888876554
No 102
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=29.49 E-value=62 Score=29.55 Aligned_cols=72 Identities=14% Similarity=0.128 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHH
Q 037640 208 IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTL 287 (398)
Q Consensus 208 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~ 287 (398)
+.+....+.+++.....+.||...+.... ..+.++++...+-+||+. |+=+.-...++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~LD~~~i~~~PK~--~~GySDiT~L~ 120 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFNS--------------------NQLLPYLDYDLISENPKI--LCGFSDITALA 120 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG--------------------GGGGGGCCHHHHHHSCCE--EEECTTHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchhH--------------------HHHhhhcchhhhccCCeE--EEecccccHHH
Confidence 34567789999999999999998766421 123355555566666666 77666666666
Q ss_pred HHHH--hCCCEeeccc
Q 037640 288 EGVC--AGLPLLTWPL 301 (398)
Q Consensus 288 eal~--~GvP~l~~P~ 301 (398)
-+++ .|...+.-|.
T Consensus 121 ~al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 121 TAIYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHHHCBCEEECCC
T ss_pred HHHHHhcCeEEEeCcc
Confidence 6654 3555555554
No 103
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=29.36 E-value=97 Score=23.29 Aligned_cols=41 Identities=17% Similarity=0.212 Sum_probs=26.6
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHH-------cCCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGK-------FNVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~-------lgIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ .+..+.+. -++|.|+++..
T Consensus 41 ~~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (144)
T 3kht_A 41 AKALYQVQQ--AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDN 90 (144)
T ss_dssp HHHHHHHTT--CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETT
T ss_pred HHHHHHhhc--CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCC
Confidence 344455556 7899999998765 34444433 24788877654
No 104
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=29.25 E-value=70 Score=28.79 Aligned_cols=30 Identities=20% Similarity=0.181 Sum_probs=23.6
Q ss_pred cCCCcceeeecCCchhHHHHHHh----CCCEeeccc
Q 037640 270 SHPSVGGFLTHCGWNSTLEGVCA----GLPLLTWPL 301 (398)
Q Consensus 270 ~~~~~~~~ithgG~~s~~eal~~----GvP~l~~P~ 301 (398)
..+++ +|+-||-||+++++.. ++|+++++.
T Consensus 74 ~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 74 DGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp --CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 34455 9999999999999754 899999974
No 105
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=28.96 E-value=82 Score=28.57 Aligned_cols=74 Identities=14% Similarity=0.229 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhc-CCCcceeeecCCchh
Q 037640 207 LIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILS-HPSVGGFLTHCGWNS 285 (398)
Q Consensus 207 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~-~~~~~~~ithgG~~s 285 (398)
.+.+....+.+++.....+.||..++.... ..+.++++...+-. +|+. ||=+.-...
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyga--------------------~rlLp~LD~~~i~~a~PK~--~iGySDiTa 121 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYGC--------------------GQLLPGLDWGRLQAASPRP--LIGFSDISV 121 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSCG--------------------GGGTTTCCHHHHHHSCCCC--EEECGGGHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcCH--------------------HHHhhccchhhhhccCCCE--EEEEchhHH
Confidence 345667789999999999999998876421 12334565555555 7877 888888888
Q ss_pred HHHHHH-hCCCEeecccc
Q 037640 286 TLEGVC-AGLPLLTWPLF 302 (398)
Q Consensus 286 ~~eal~-~GvP~l~~P~~ 302 (398)
++-+++ .|.+.+.-|..
T Consensus 122 L~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 122 LLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHHTTCCEEECCCG
T ss_pred HHHHHHHcCCcEEECHhh
Confidence 888886 48888887765
No 106
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=28.95 E-value=52 Score=30.42 Aligned_cols=74 Identities=7% Similarity=-0.069 Sum_probs=42.6
Q ss_pred HhhcCCceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCE
Q 037640 147 KKISRDKAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPF 226 (398)
Q Consensus 147 ~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 226 (398)
.+..|.++..++-+-+..+.. ..+++...++..+-+++.+.+.-.....+...+..+.+++++.+.+|
T Consensus 122 ~~~~P~Rf~g~a~v~~~~~~~------------a~~El~r~~~~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV 189 (357)
T 3nur_A 122 IAQYPNRFVGFATLPINEPEA------------AAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPI 189 (357)
T ss_dssp HHHSTTTEEECBCCCTTSHHH------------HHHHHHHHHHTTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCE
T ss_pred HHhCCCEEEEEEeCCCCCHHH------------HHHHHHHHHhhcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeE
Confidence 344566777766553322111 13667777754444445443211122345567888999999999998
Q ss_pred EEEEeC
Q 037640 227 IWVIRE 232 (398)
Q Consensus 227 i~~~~~ 232 (398)
..-.+.
T Consensus 190 ~iH~g~ 195 (357)
T 3nur_A 190 YLHPAP 195 (357)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 776654
No 107
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=28.86 E-value=1.6e+02 Score=24.99 Aligned_cols=45 Identities=11% Similarity=-0.094 Sum_probs=29.8
Q ss_pred eEEeecCchh-hhhcCCCcceeeecCCchhHHHHHH---------hCCCEeeccc
Q 037640 257 LVIWDWAPQV-LILSHPSVGGFLTHCGWNSTLEGVC---------AGLPLLTWPL 301 (398)
Q Consensus 257 v~~~~~~pq~-~~L~~~~~~~~ithgG~~s~~eal~---------~GvP~l~~P~ 301 (398)
..+...+++. .++..-+-..++--||.||+-|... +++|++.+-.
T Consensus 93 ~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 93 VRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 3444555644 4454444456778899999888762 4899998764
No 108
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=28.70 E-value=84 Score=22.56 Aligned_cols=40 Identities=28% Similarity=0.436 Sum_probs=26.5
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc----CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF----NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l----gIP~v~~~~~ 62 (398)
...+.+++ .+||+||.|...+ .+..+.+.+ .+|.+.++..
T Consensus 36 ~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 81 (120)
T 2a9o_A 36 EALEQFEA--EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAK 81 (120)
T ss_dssp HHHHHHHH--HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESC
T ss_pred HHHHHHHh--CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecC
Confidence 34445555 6899999998764 455555443 6888887654
No 109
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=28.66 E-value=73 Score=23.92 Aligned_cols=40 Identities=5% Similarity=0.140 Sum_probs=26.1
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|. .+ .+..+.+.+ ++|.|.++..
T Consensus 38 ~~a~~~l~~--~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 38 QEAFTFLRR--EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp HHHHHHHTT--SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHhc--cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECC
Confidence 445556666 7899999998 64 344444433 5888887654
No 110
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=28.51 E-value=69 Score=23.87 Aligned_cols=40 Identities=20% Similarity=0.330 Sum_probs=26.5
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
...+.+++ .+||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 40 ~al~~~~~--~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (133)
T 3b2n_A 40 DAMKLIEE--YNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTF 86 (133)
T ss_dssp HHHHHHHH--HCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHhh--cCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecC
Confidence 34445555 6899999998765 455555443 4788877554
No 111
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=28.44 E-value=2.1e+02 Score=25.92 Aligned_cols=109 Identities=13% Similarity=0.081 Sum_probs=61.4
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCc
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSV 274 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~ 274 (398)
+.+|..|.++ ...+.++.+. +..++.+...+.. -.+.+.++. ++. .+-...+++..+.+
T Consensus 8 vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~~~--------~~~~~~~~~---g~~--~~~~~~~~l~~~~~ 67 (354)
T 3db2_A 8 VAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRTED--------KREKFGKRY---NCA--GDATMEALLAREDV 67 (354)
T ss_dssp EEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSSHH--------HHHHHHHHH---TCC--CCSSHHHHHHCSSC
T ss_pred EEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCCHH--------HHHHHHHHc---CCC--CcCCHHHHhcCCCC
Confidence 7778887765 3466677765 5666655543311 011121221 221 25566778877666
Q ss_pred ceeeecCC----chhHHHHHHhCCCEee-ccccc--chhhhHHHHHHHhcceEEecc
Q 037640 275 GGFLTHCG----WNSTLEGVCAGLPLLT-WPLFA--DQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 275 ~~~ithgG----~~s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~g~g~~l~~ 324 (398)
.+++--.- ..-+.+|+.+|+++++ -|+.. ++..-...++++.|+-+.+..
T Consensus 68 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~ 124 (354)
T 3db2_A 68 EMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGH 124 (354)
T ss_dssp CEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEEC
T ss_pred CEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEee
Confidence 55553222 3456788999999888 47653 444444444456776666654
No 112
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=28.38 E-value=1.1e+02 Score=22.01 Aligned_cols=41 Identities=15% Similarity=0.370 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ .+||++|.|...+ -+..+.+.+ .+|.+.++..
T Consensus 34 ~~a~~~~~~--~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (121)
T 2pl1_A 34 KEADYYLNE--HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTAR 81 (121)
T ss_dssp HHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESC
T ss_pred HHHHHHHhc--cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecC
Confidence 344455566 7899999998764 455554443 5888877654
No 113
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=28.36 E-value=84 Score=22.06 Aligned_cols=48 Identities=15% Similarity=0.171 Sum_probs=29.7
Q ss_pred hCCCEeecccccchhhhHH---HHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhc
Q 037640 292 AGLPLLTWPLFADQFTNEK---LAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMD 354 (398)
Q Consensus 292 ~GvP~l~~P~~~DQ~~na~---~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 354 (398)
.|+|++++--...|...-. .. .+-|+...+-+. .++++|...+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqnea-kkegvsydvlks--------------tdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEA-KKEGVSYDVLKS--------------TDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHH-HHHTCEEEEEEC--------------CCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHH-HhcCcchhhhcc--------------CCHHHHHHHHHHHHH
Confidence 4778777655555543221 12 344555555443 689999999998874
No 114
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=28.33 E-value=97 Score=22.72 Aligned_cols=41 Identities=15% Similarity=0.196 Sum_probs=26.2
Q ss_pred HHHHHHHhhcCC-CCcEEEECCCcc---cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKP-QPNCIISDVCLP---YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~-~~D~VI~D~~~~---~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ . +||+||.|...+ .+..+.+.+ ++|.|+++..
T Consensus 39 ~~a~~~l~~--~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 39 AKAIEMLKS--GAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHHHHHT--TCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHHHHHc--CCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 344455555 5 899999998654 345554443 5888877554
No 115
>2kmf_A Photosystem II 11 kDa protein; PSB27, structure, helical bundle, cyanobacteria, photosynthesis; NMR {Synechocystis SP} PDB: 2knd_A
Probab=28.31 E-value=1.2e+02 Score=23.10 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=31.3
Q ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHh--------cCCchHHHHHHHHHHHHcC
Q 037640 344 DVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQ--------EGGSSHLNITLLLQDIMKH 397 (398)
Q Consensus 344 ~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~ 397 (398)
++.+.|++.+..++.....++.+..+++.+.+.+. .|-.|..++...||.|.+|
T Consensus 22 ~Vv~~lr~~l~l~~d~~~~~~a~~~ar~~ind~vsrYRr~~~v~g~~Sf~tm~tAlNaLAGH 83 (115)
T 2kmf_A 22 TVIATLREAIDLPQDAPNRQEVQDTARGQINDYISRYRRKGDAGGLKSFTTMQTALNSLAGY 83 (115)
T ss_dssp HHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHTHHHHCSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHH
Confidence 34444555444333334555555555555543322 3567788888888888765
No 116
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=28.18 E-value=1.1e+02 Score=30.28 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=24.2
Q ss_pred CCcceeeecCC------chhHHHHHHhCCCEeecc
Q 037640 272 PSVGGFLTHCG------WNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 272 ~~~~~~ithgG------~~s~~eal~~GvP~l~~P 300 (398)
.+.+++++|.| .+.+.||.+.++|+|++-
T Consensus 67 gk~~v~~~tsGpG~~N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 67 GNLGVTVGSGGPGASHLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp CCCCEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCCEEEEeCcChHHHHHHHHHHHHHhcCCCEEEEc
Confidence 34556999998 679999999999999974
No 117
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=28.13 E-value=51 Score=29.80 Aligned_cols=72 Identities=8% Similarity=0.048 Sum_probs=40.6
Q ss_pred HHhhcCCceeecCcccCCCcccchhhccCCCCCCChhhhhhhhcCCCCCceEEEeeCCcc---cCCHHHHHHHHHHHHhC
Q 037640 146 YKKISRDKAWCIGPVSLSNKEYSDKAQRGNTSSLDEHKCLKWLDSKDPKSVVYACLGSMC---NLIPSQMMELGLGLEAS 222 (398)
Q Consensus 146 ~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vv~vs~Gs~~---~~~~~~~~~~~~al~~~ 222 (398)
.....|.++..+|-+.+..+.. ..+++..+++..+-++| -+|+.. .+..+.+..+.+.+++.
T Consensus 103 ~~~~~p~r~~~~~~l~~~~~~~------------a~~el~~~~~~~g~~Gv---~l~~~~~~~~l~d~~~~~~~~~~~e~ 167 (336)
T 2wm1_A 103 TVVSYPRRFVGLGTLPMQAPEL------------AVKEMERCVKELGFPGV---QIGTHVNEWDLNAQELFPVYAAAERL 167 (336)
T ss_dssp HHHHSTTTEEEEECCCTTSHHH------------HHHHHHHHHHTSCCSEE---EEESEETTEETTCGGGHHHHHHHHHH
T ss_pred HHHhccCceeEEEeCCCcCHHH------------HHHHHHHHHHccCCeEE---EECCcCCCCCCCCccHHHHHHHHHHc
Confidence 3344555677766554332111 13567777754332333 334332 24556778888888888
Q ss_pred CCCEEEEEeC
Q 037640 223 NRPFIWVIRE 232 (398)
Q Consensus 223 ~~~~i~~~~~ 232 (398)
+.+|++-.+.
T Consensus 168 ~lpv~iH~~~ 177 (336)
T 2wm1_A 168 KCSLFVHPWD 177 (336)
T ss_dssp TCEEEEECCS
T ss_pred CCEEEECCCC
Confidence 9988876653
No 118
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=28.06 E-value=80 Score=23.12 Aligned_cols=41 Identities=12% Similarity=0.131 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHH-------cCCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGK-------FNVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~-------lgIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+. -++|.+.++..
T Consensus 37 ~~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 37 TDALHAMST--RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp HHHHHHHHH--SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred HHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 445556666 7899999998764 45555543 24777766543
No 119
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=27.44 E-value=2.9e+02 Score=28.75 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=29.5
Q ss_pred cccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCc
Q 037640 339 LVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGS 382 (398)
Q Consensus 339 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~ 382 (398)
.++++.|..++.+++. ......+++..+......+....+.|-
T Consensus 771 gld~~~Iv~~a~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 771 DMDRYALQAAALKLID-ADKYADKIDELNAFRKKAFQFAVDNGY 813 (845)
T ss_dssp TCSHHHHHHHHHHHHH-TTTTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CcCHHHHHHHHHHHcc-hhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4899999999998886 555556666666666665555554443
No 120
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=27.36 E-value=59 Score=26.21 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=27.0
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
...+.+++ .+||+||.|..++ -|..+++.+ ++|.|+++..
T Consensus 42 ~al~~~~~--~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (184)
T 3rqi_A 42 EALKLAGA--EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGY 88 (184)
T ss_dssp HHHHHHTT--SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESS
T ss_pred HHHHHHhh--CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCC
Confidence 44455556 7899999998765 455555443 5888877654
No 121
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=27.23 E-value=79 Score=23.90 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=24.8
Q ss_pred HHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEec
Q 037640 22 VENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHG 61 (398)
Q Consensus 22 l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~ 61 (398)
..+.+++ .+||+||.|...+ .|..+.+.+ ++|.|.++.
T Consensus 41 al~~~~~--~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 41 AIQIALK--HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp HHHHHTT--SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 3444555 6899999998764 455555543 477776644
No 122
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=27.20 E-value=1e+02 Score=22.26 Aligned_cols=41 Identities=22% Similarity=0.372 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 37 ~~a~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 37 AEMHQILSE--YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp HHHHHHHHH--SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHHHHHhc--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 344455566 7899999998764 455555443 5787776554
No 123
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=27.18 E-value=1.8e+02 Score=22.12 Aligned_cols=48 Identities=15% Similarity=-0.005 Sum_probs=31.8
Q ss_pred HhCCCEeecccccchhhhHHHHHHHhcceEEeccCCCCCccccccccccccHHHHHHHHHHHhc
Q 037640 291 CAGLPLLTWPLFADQFTNEKLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKNAVERLMD 354 (398)
Q Consensus 291 ~~GvP~l~~P~~~DQ~~na~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ai~~vl~ 354 (398)
...+|+|++--..+. ...... -+.|+--.+.+. ++.++|..+|++++.
T Consensus 73 ~~~~pii~ls~~~~~-~~~~~~-~~~g~~~~l~kP--------------~~~~~L~~~i~~~~~ 120 (155)
T 1qkk_A 73 DPDLPMILVTGHGDI-PMAVQA-IQDGAYDFIAKP--------------FAADRLVQSARRAEE 120 (155)
T ss_dssp CTTSCEEEEECGGGH-HHHHHH-HHTTCCEEEESS--------------CCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCh-HHHHHH-HhcCCCeEEeCC--------------CCHHHHHHHHHHHHH
Confidence 347888887544332 333444 256765556543 799999999999885
No 124
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=26.91 E-value=83 Score=23.61 Aligned_cols=41 Identities=12% Similarity=0.061 Sum_probs=27.4
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l----gIP~v~~~~~ 62 (398)
....+.+.+ .+||+||.|...+ -+..+.+.+ .+|.+.++..
T Consensus 38 ~~al~~~~~--~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~ 84 (136)
T 2qzj_A 38 EEAIGKIFS--NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYI 84 (136)
T ss_dssp HHHHHHHHH--CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcC
Confidence 344455556 7899999998764 455555544 5888877554
No 125
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=26.68 E-value=1.7e+02 Score=24.20 Aligned_cols=103 Identities=15% Similarity=0.048 Sum_probs=56.6
Q ss_pred hhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEee
Q 037640 182 HKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWD 261 (398)
Q Consensus 182 ~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~ 261 (398)
.++-++|.+.+ +.+|+.|.... .+.+..++..+.+-++|=++........ .+. ..-.+.++..
T Consensus 23 ~~lg~~La~~g---~~lV~GGg~~G----iM~aa~~gA~~~gG~~iGv~p~~l~~~e-----~~~-----~~~~~~~~~~ 85 (191)
T 1t35_A 23 AELGVYMAEQG---IGLVYGGSRVG----LMGTIADAIMENGGTAIGVMPSGLFSGE-----VVH-----QNLTELIEVN 85 (191)
T ss_dssp HHHHHHHHHTT---CEEEECCCCSH----HHHHHHHHHHTTTCCEEEEEETTCCHHH-----HTT-----CCCSEEEEES
T ss_pred HHHHHHHHHCC---CEEEECCCccc----HHHHHHHHHHHcCCeEEEEeCchhcccc-----ccc-----CCCCccccCC
Confidence 45666665543 56677665421 4455666666666666655544311100 000 0012334445
Q ss_pred cCchh-hhhcCCCcceeeecCCchhHHHH---H------HhCCCEeeccc
Q 037640 262 WAPQV-LILSHPSVGGFLTHCGWNSTLEG---V------CAGLPLLTWPL 301 (398)
Q Consensus 262 ~~pq~-~~L~~~~~~~~ithgG~~s~~ea---l------~~GvP~l~~P~ 301 (398)
.++.. .++..-+-..++--||.||+-|. + .+++|++.+-.
T Consensus 86 ~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 86 GMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred CHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 55543 45544444567888999987765 4 37899999854
No 126
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=26.62 E-value=1e+02 Score=22.86 Aligned_cols=41 Identities=15% Similarity=0.085 Sum_probs=26.8
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 37 ~~al~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (132)
T 3crn_A 37 GEGLAKIEN--EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGY 84 (132)
T ss_dssp HHHHHHHHH--SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESC
T ss_pred HHHHHHHhc--CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEecc
Confidence 344455556 7899999998764 455555443 5788776554
No 127
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=26.44 E-value=3.5e+02 Score=24.18 Aligned_cols=109 Identities=13% Similarity=0.106 Sum_probs=60.5
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCc
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSV 274 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~ 274 (398)
+.+|..|.++. ..+.++.+. +..++.....+.. --+.+.+ .-++. -+-...+++..+.+
T Consensus 7 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~--------~~~~~a~---~~g~~--~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 7 IALFGAGRIGH-------VHAANIAANPDLELVVIADPFIE--------GAQRLAE---ANGAE--AVASPDEVFARDDI 66 (344)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSHH--------HHHHHHH---TTTCE--EESSHHHHTTCSCC
T ss_pred EEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCCHH--------HHHHHHH---HcCCc--eeCCHHHHhcCCCC
Confidence 67788877652 455666664 5566655543311 0011111 12322 24566778886666
Q ss_pred ceeeecCCch----hHHHHHHhCCCEee-ccccc--chhhhHHHHHHHhcceEEecc
Q 037640 275 GGFLTHCGWN----STLEGVCAGLPLLT-WPLFA--DQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 275 ~~~ithgG~~----s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~g~g~~l~~ 324 (398)
.+++--.-.. -+.+|+.+|+++++ -|+.. ++..-...++++.|+-+.+..
T Consensus 67 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~ 123 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGF 123 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECC
T ss_pred CEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecc
Confidence 6666444333 46788999999988 57654 344334444456666555544
No 128
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=26.39 E-value=67 Score=25.97 Aligned_cols=28 Identities=21% Similarity=0.084 Sum_probs=22.4
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCC
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASN 223 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 223 (398)
+.|+|+||....+.+.+...+++|.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6799999998766777888888887753
No 129
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=26.35 E-value=75 Score=29.14 Aligned_cols=73 Identities=18% Similarity=0.238 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHH
Q 037640 208 IPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTL 287 (398)
Q Consensus 208 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~ 287 (398)
+.+....+.+++.....+.||..++.... ..+.++++...+-++|+. ||=+.-...++
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL~ 121 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMNS--------------------NSLLPYIDYDAFQNNPKI--MIGYSDATALL 121 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG--------------------GGGGGGSCHHHHHHSCCE--EEECGGGHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH--------------------HHHhhhcChhHHhhCCeE--EEEechHHHHH
Confidence 35567789999999999999998776421 123355655556667777 88888888888
Q ss_pred HHHH--hCCCEeecccc
Q 037640 288 EGVC--AGLPLLTWPLF 302 (398)
Q Consensus 288 eal~--~GvP~l~~P~~ 302 (398)
-+++ .|+..+.-|..
T Consensus 122 ~al~~~~G~~t~hGp~~ 138 (336)
T 3sr3_A 122 LGIYAKTGIPTFYGPAL 138 (336)
T ss_dssp HHHHHHHCCCEEECCCH
T ss_pred HHHHHhcCceEEECChh
Confidence 8877 58888888864
No 130
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=26.31 E-value=77 Score=23.01 Aligned_cols=40 Identities=18% Similarity=0.361 Sum_probs=24.7
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-------CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-------NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 62 (398)
.....+++ .+||+||.|...+ -+..+.+.+ .+|.+.++..
T Consensus 36 ~a~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 36 SALSIARE--NKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HHHHHHHH--HCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred HHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 33445555 6899999998765 455555443 4777776443
No 131
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=26.25 E-value=2.7e+02 Score=22.79 Aligned_cols=143 Identities=13% Similarity=0.093 Sum_probs=72.4
Q ss_pred ceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCc
Q 037640 195 SVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSV 274 (398)
Q Consensus 195 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~ 274 (398)
+.|-|-+||.. +.+..++....|+..+.++=..+-+... .|+.+.+ |+.... -...+
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR--------~p~~~~~-----------~~~~a~-~~g~~- 64 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAHR--------TPEAMFS-----------YARGAA-ARGLE- 64 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--------CHHHHHH-----------HHHHHH-HHTCC-
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCCC--------CHHHHHH-----------HHHHHH-hCCCC-
Confidence 34667788877 4556777888888888887655544432 4443322 211111 11223
Q ss_pred ceeeecCCch----hHHHHHHhCCCEeecccccchh--hhH-HHHHHHhcceEEeccCCCCCccccccccccccHHHHHH
Q 037640 275 GGFLTHCGWN----STLEGVCAGLPLLTWPLFADQF--TNE-KLAVHLLKIGVKIGVENPMTWGEEQNIGVLVKRDDVKN 347 (398)
Q Consensus 275 ~~~ithgG~~----s~~eal~~GvP~l~~P~~~DQ~--~na-~~v~~~~g~g~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 347 (398)
+||.=.|.. ++.-+ ..-+|+|++|...... ..+ .-+. +.--|+-+..- .+++-.+..-+..
T Consensus 65 -ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~v-qmp~GvpVatV---------~I~~~~nAa~lAa 132 (174)
T 3lp6_A 65 -VIIAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIV-QMPAGVPVATV---------SIGGAGNAGLLAV 132 (174)
T ss_dssp -EEEEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHH-CCCTTCCCEEC---------CTTCHHHHHHHHH
T ss_pred -EEEEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHh-hCCCCCeeEEE---------EcCcchHHHHHHH
Confidence 377776654 33333 3568999999863211 111 1111 22223211100 0011245555555
Q ss_pred HHHHHhccCcchHHHHHHHHHHHHHHHHHH
Q 037640 348 AVERLMDEGNDGEERRNRALNLAKMAKMAI 377 (398)
Q Consensus 348 ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~ 377 (398)
.|-. +.|+ .++++.+..++..++.+
T Consensus 133 ~Il~-~~d~----~l~~kl~~~r~~~~~~v 157 (174)
T 3lp6_A 133 RMLG-AANP----QLRARIVAFQDRLADVV 157 (174)
T ss_dssp HHHH-TTCH----HHHHHHHHHHHHHHHHH
T ss_pred HHHh-CCCH----HHHHHHHHHHHHHHHHH
Confidence 5544 3455 67777777776665543
No 132
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=26.16 E-value=3.5e+02 Score=24.05 Aligned_cols=32 Identities=6% Similarity=-0.033 Sum_probs=21.6
Q ss_pred EEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCC
Q 037640 198 YACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREG 233 (398)
Q Consensus 198 ~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 233 (398)
++..||....+.+ +++++.+.+.+|+.+.+-.
T Consensus 113 ~lqIgA~~~~n~~----LLr~va~~gkPVilK~G~~ 144 (285)
T 3sz8_A 113 VLQVPAFLARQTD----LVVAIAKAGKPVNVKKPQF 144 (285)
T ss_dssp EEEECGGGTTCHH----HHHHHHHTSSCEEEECCTT
T ss_pred EEEECccccCCHH----HHHHHHccCCcEEEeCCCC
Confidence 4555665555544 5555667899999998753
No 133
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=25.96 E-value=74 Score=23.21 Aligned_cols=40 Identities=15% Similarity=0.332 Sum_probs=26.3
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
...+.+++ .+||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 38 ~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (124)
T 1srr_A 38 QALDIVTK--ERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAY 84 (124)
T ss_dssp HHHHHHHH--HCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESS
T ss_pred HHHHHHhc--cCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEcc
Confidence 34445555 6899999998764 455555443 5788877654
No 134
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=25.68 E-value=63 Score=30.56 Aligned_cols=47 Identities=13% Similarity=0.049 Sum_probs=34.8
Q ss_pred hhhhhhhcCCCCCceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEE
Q 037640 182 HKCLKWLDSKDPKSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIW 228 (398)
Q Consensus 182 ~~~~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 228 (398)
+...+|-.......-|.|-++|+...+....+++++++.+.|..++.
T Consensus 253 ~~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 253 NHYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp HHHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 34456665443334577889999998888888999999999987664
No 135
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=25.67 E-value=72 Score=24.40 Aligned_cols=41 Identities=17% Similarity=0.219 Sum_probs=26.7
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ .+..+.+.+ ++|.|+++..
T Consensus 51 ~~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 98 (152)
T 3eul_A 51 AAALELIKA--HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAH 98 (152)
T ss_dssp HHHHHHHHH--HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEcc
Confidence 344455556 6899999998764 455555443 4777776554
No 136
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=25.61 E-value=90 Score=22.85 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=25.5
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-------CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-------NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 62 (398)
...+.+++ .+||+||.|...+ -+..+.+.+ ++|.+.++..
T Consensus 42 ~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 42 QGMKIMAQ--NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHHHT--SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHHHc--CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 34455555 6899999998765 456665544 3566665443
No 137
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=25.44 E-value=86 Score=28.28 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=27.3
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcc---cHHHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLP---YTAQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~---~~~~vA~~lgIP~v~~ 59 (398)
...+.+++++ .+||+|++..... .+..+|...|+|++.+
T Consensus 84 ~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~ 125 (375)
T 3beo_A 84 LEGLDKVMKE--AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHV 125 (375)
T ss_dssp HHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEE
Confidence 3456777888 8999999854322 2345678899999854
No 138
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=25.29 E-value=43 Score=28.69 Aligned_cols=45 Identities=4% Similarity=-0.096 Sum_probs=29.1
Q ss_pred eEEeecCchh-hhhcCCCcceeeecCCchhHHHHH---------HhCCCEeeccc
Q 037640 257 LVIWDWAPQV-LILSHPSVGGFLTHCGWNSTLEGV---------CAGLPLLTWPL 301 (398)
Q Consensus 257 v~~~~~~pq~-~~L~~~~~~~~ithgG~~s~~eal---------~~GvP~l~~P~ 301 (398)
+.+...++.. .++...+-.+++--||.||+-|.. .+++|++.+-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4455555533 343333334577789999988876 47999998863
No 139
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=25.21 E-value=1.1e+02 Score=22.39 Aligned_cols=41 Identities=15% Similarity=0.206 Sum_probs=25.3
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc------CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF------NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l------gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+.+ ..|.|.+.+.
T Consensus 40 ~~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 40 FDAGIKLST--FEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp HHHHHHHHH--TCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred HHHHHHHHh--cCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC
Confidence 344555666 7999999998764 455555443 3455555443
No 140
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=25.15 E-value=1.6e+02 Score=26.75 Aligned_cols=34 Identities=12% Similarity=0.145 Sum_probs=25.6
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEe
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIR 231 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 231 (398)
++++++|+.+. ..-+..++++|++.|+.|.+...
T Consensus 7 il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 7 ILFANVQGHGH--VYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcC
Confidence 77888876553 23456789999999999988774
No 141
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=25.03 E-value=50 Score=20.88 Aligned_cols=42 Identities=12% Similarity=0.191 Sum_probs=30.8
Q ss_pred cHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Q 037640 341 KRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNIT 388 (398)
Q Consensus 341 ~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 388 (398)
+..+|...+..+|. .+..+-..++..+-..+.+=|+.-.+|+
T Consensus 3 ~~~dLt~~vq~LL~------qmq~kFq~mS~~I~~riDdM~~RIDdLE 44 (48)
T 3ci9_A 3 TVQDLTSVVQTLLQ------QMQDKFQTISDQIIGRIDDMSSRIDDLE 44 (48)
T ss_dssp CHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 67899999999996 7788888888887766655454444444
No 142
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=25.00 E-value=1e+02 Score=23.05 Aligned_cols=43 Identities=16% Similarity=0.258 Sum_probs=27.0
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+.+...+||+||.|...+ .+..+.+.+ ++|.|+++..
T Consensus 37 ~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (143)
T 3jte_A 37 TEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGH 86 (143)
T ss_dssp HHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECT
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECC
Confidence 344445552116899999998764 455555443 5888877654
No 143
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=24.98 E-value=1.3e+02 Score=22.91 Aligned_cols=40 Identities=15% Similarity=0.300 Sum_probs=26.6
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
...+.+++ .+||+||.|...+ -+..+.+.+ ++|.++++..
T Consensus 42 ~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 88 (153)
T 3cz5_A 42 EAYRLYRE--TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMH 88 (153)
T ss_dssp HHHHHHHT--TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECC
Confidence 44455556 7899999998664 455554443 5888887654
No 144
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=24.89 E-value=3.7e+02 Score=23.88 Aligned_cols=108 Identities=9% Similarity=0.009 Sum_probs=60.2
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCc
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSV 274 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~ 274 (398)
+.+|..|.++. ..+.++.+. +..++.....+.. -.+.+.++ -++. +-...+++..+.+
T Consensus 6 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~~--------~~~~~~~~---~~~~---~~~~~~~l~~~~~ 64 (331)
T 4hkt_A 6 FGLLGAGRIGK-------VHAKAVSGNADARLVAVADAFPA--------AAEAIAGA---YGCE---VRTIDAIEAAADI 64 (331)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSSHH--------HHHHHHHH---TTCE---ECCHHHHHHCTTC
T ss_pred EEEECCCHHHH-------HHHHHHhhCCCcEEEEEECCCHH--------HHHHHHHH---hCCC---cCCHHHHhcCCCC
Confidence 66777776652 455666664 5565555543211 01112121 2333 5566778887666
Q ss_pred ceeeecCC----chhHHHHHHhCCCEee-ccccc--chhhhHHHHHHHhcceEEecc
Q 037640 275 GGFLTHCG----WNSTLEGVCAGLPLLT-WPLFA--DQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 275 ~~~ithgG----~~s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~g~g~~l~~ 324 (398)
.+++--.- ..-+.+++.+|+++++ -|+.. ++......++++.|+-..+..
T Consensus 65 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~ 121 (331)
T 4hkt_A 65 DAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGF 121 (331)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcc
Confidence 66653322 3456788999999888 47543 444444444456776666654
No 145
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=24.87 E-value=2.8e+02 Score=22.61 Aligned_cols=86 Identities=15% Similarity=0.189 Sum_probs=50.2
Q ss_pred CceEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCC
Q 037640 194 KSVVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPS 273 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~ 273 (398)
.|.|-|-+||... .+..++....|+..+.++=..+-+... .|+.+.+ |+... ....
T Consensus 12 ~P~V~IimGS~SD--~~v~~~a~~~l~~~gi~~ev~V~saHR--------~p~~l~~-----------~~~~a---~~~g 67 (173)
T 4grd_A 12 APLVGVLMGSSSD--WDVMKHAVAILQEFGVPYEAKVVSAHR--------MPDEMFD-----------YAEKA---RERG 67 (173)
T ss_dssp SCSEEEEESSGGG--HHHHHHHHHHHHHTTCCEEEEECCTTT--------SHHHHHH-----------HHHHH---TTTT
T ss_pred CCeEEEEeCcHhH--HHHHHHHHHHHHHcCCCEEEEEEcccc--------CHHHHHH-----------HHHHH---HhcC
Confidence 3467788888874 456777888888888886555544432 4443322 11111 1122
Q ss_pred cceeeecCCch----hHHHHHHhCCCEeecccccc
Q 037640 274 VGGFLTHCGWN----STLEGVCAGLPLLTWPLFAD 304 (398)
Q Consensus 274 ~~~~ithgG~~----s~~eal~~GvP~l~~P~~~D 304 (398)
+++||.=.|.- ++.-+ ..-+|+|++|....
T Consensus 68 ~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~ 101 (173)
T 4grd_A 68 LRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASK 101 (173)
T ss_dssp CSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCT
T ss_pred CeEEEEeccccccchhhhee-cCCCCEEEEEcCCC
Confidence 33366665543 44433 55799999997643
No 146
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=24.66 E-value=1.3e+02 Score=24.56 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=35.9
Q ss_pred HHHHHHhchHHHHHHHhhcCCCCcEEEECCCccc---------------HHHHHHHcCCCeEEEech
Q 037640 11 FFTAADKLLEPVENLFGQLKPQPNCIISDVCLPY---------------TAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 11 l~~a~~~~~~~l~~~L~~~~~~~D~VI~D~~~~~---------------~~~vA~~lgIP~v~~~~~ 62 (398)
+-+.+......+.++|++ .+||.+..+..+.. +..++...|||+.-+.+.
T Consensus 44 ~~~RL~~I~~~l~~~i~~--~~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~ 108 (166)
T 4ep4_A 44 AKERVGRIHARVLEVLHR--FRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPM 108 (166)
T ss_dssp HHHHHHHHHHHHHHHHHH--HCCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHH
T ss_pred HHHHHHHHHHHHHHHHHH--hCCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 344566778899999999 89999988875531 223456678998887654
No 147
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=24.62 E-value=1.3e+02 Score=21.93 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=25.8
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-------CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-------NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 62 (398)
...+.+++ .+||+||.|...+ -+..+.+.+ .+|.+.++..
T Consensus 40 ~a~~~~~~--~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~ 88 (128)
T 1jbe_A 40 DALNKLQA--GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAE 88 (128)
T ss_dssp HHHHHHTT--CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESS
T ss_pred HHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecC
Confidence 33344555 6899999998765 455555543 4677776554
No 148
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=24.41 E-value=75 Score=25.69 Aligned_cols=28 Identities=21% Similarity=0.084 Sum_probs=23.1
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCC
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASN 223 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 223 (398)
.+|+++||....+...+...+++|.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999998777778888888888753
No 149
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=24.20 E-value=1e+02 Score=24.88 Aligned_cols=28 Identities=25% Similarity=0.173 Sum_probs=24.1
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCC
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASN 223 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 223 (398)
.+|+++||....+...+...+++|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999999888888888889998754
No 150
>2y6x_A PSB27, photosystem II 11 KD protein; photosynthesis; 1.60A {Thermosynechococcus elongatus}
Probab=24.09 E-value=1.7e+02 Score=22.08 Aligned_cols=54 Identities=9% Similarity=0.122 Sum_probs=30.3
Q ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHh--------cCCchHHHHHHHHHHHHcC
Q 037640 344 DVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQ--------EGGSSHLNITLLLQDIMKH 397 (398)
Q Consensus 344 ~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~ 397 (398)
.+.+.|++.+.-++......+.+..+++.+.+.+. .|-.|..++...||.|.+|
T Consensus 18 ~Vv~~lr~~l~l~~d~~~~~~a~~~ar~~ind~vsrYRr~~~v~g~~Sfttm~tAlNaLAGH 79 (113)
T 2y6x_A 18 ALISSLREAIALPENDPNKKAAQAEARKKLNDFFALYRRDDSLRSLSSFMTMQTALNSLAGH 79 (113)
T ss_dssp HHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHTTCHHHHTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHHHHHH
Confidence 34444555443333333455555555555543322 2556788888888888765
No 151
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=23.66 E-value=57 Score=31.73 Aligned_cols=35 Identities=20% Similarity=0.114 Sum_probs=29.4
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIA 58 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~ 58 (398)
...+.+.+++ .+||++|.. ..+..+|+++|||++.
T Consensus 406 ~~el~~~i~~--~~pDL~ig~---~~~~~ia~k~gIP~~~ 440 (492)
T 3u7q_A 406 GYEFEEFVKR--IKPDLIGSG---IKEKFIFQKMGIPFRE 440 (492)
T ss_dssp HHHHHHHHHH--HCCSEEEEC---HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHh--cCCcEEEeC---cchhHHHHHcCCCEEe
Confidence 5677888888 799999986 4567899999999995
No 152
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.65 E-value=97 Score=23.23 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+.+ .+|.+.++..
T Consensus 38 ~~a~~~l~~--~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 38 RDAIQFIER--SKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp HHHHHHHHH--HCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHHHHh--cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 344455555 6899999998764 455555543 4777776544
No 153
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=23.47 E-value=97 Score=28.28 Aligned_cols=28 Identities=29% Similarity=0.487 Sum_probs=20.9
Q ss_pred CCCcceeeec-CCchhHHHHHHhCCCEeecc
Q 037640 271 HPSVGGFLTH-CGWNSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 271 ~~~~~~~ith-gG~~s~~eal~~GvP~l~~P 300 (398)
.+++ +|+| .++.+..-|-..|+|.+.+=
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~ 142 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHR 142 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEEC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEe
Confidence 5665 6666 66667777888999998874
No 154
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=23.43 E-value=63 Score=31.31 Aligned_cols=36 Identities=17% Similarity=0.081 Sum_probs=29.4
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
...+.+.+++ .+||++|.. ..+..+|+++|||++.+
T Consensus 390 ~~el~~~i~~--~~pDL~ig~---~~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 390 ARVLLKTVDE--YQADILIAG---GRNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHHH--TTCSEEECC---GGGHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHh--cCCCEEEEC---CchhHHHHHcCCCEEEe
Confidence 5678888888 899999975 45677899999999843
No 155
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=23.37 E-value=1.4e+02 Score=22.24 Aligned_cols=29 Identities=17% Similarity=0.249 Sum_probs=19.2
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHH
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGK 51 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~ 51 (398)
...+.+++ .+||+||.|...+ .|..+.+.
T Consensus 45 ~al~~l~~--~~~dlvllD~~lp~~~g~~~~~~ 75 (140)
T 3c97_A 45 QALQAYQN--RQFDVIIMDIQMPVMDGLEAVSE 75 (140)
T ss_dssp HHHHHHHH--SCCSEEEECTTCCSSCHHHHHHH
T ss_pred HHHHHHhc--CCCCEEEEeCCCCCCcHHHHHHH
Confidence 44445556 6899999998764 45555544
No 156
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=23.31 E-value=1.4e+02 Score=18.63 Aligned_cols=53 Identities=15% Similarity=0.057 Sum_probs=31.7
Q ss_pred cccccccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHc
Q 037640 335 NIGVLVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAIQEGGSSHLNITLLLQDIMK 396 (398)
Q Consensus 335 ~~~~~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 396 (398)
++++.++.+++..+++.+-. . -....+...++.. ...++..-++++|+..+..
T Consensus 12 d~~G~i~~~e~~~~l~~~~~------~--~~~~~~~~~~~~~-D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 12 NGDGAVSYEEVKAFVSKKRA------I--KNEQLLQLIFKSI-DADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp TCSSSCCHHHHHHHHHHHHH------H--HHHHHHHHHHHHH-CTTCSSSCCHHHHHHHHTC
T ss_pred CCCCcccHHHHHHHHHHccC------C--CcHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHh
Confidence 34578999999999987532 2 2233455555544 3344444566666665543
No 157
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=23.23 E-value=4.1e+02 Score=23.84 Aligned_cols=111 Identities=10% Similarity=-0.011 Sum_probs=60.6
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCc
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSV 274 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~ 274 (398)
+.+|.+|.+.. ...+.++... +..++.+...+ . .+.+.++....++.+ +-...++|..+.+
T Consensus 5 vgiiG~G~~g~------~~~~~~l~~~~~~~l~av~d~~-~---------~~~~a~~~~~~~~~~--~~~~~~ll~~~~~ 66 (349)
T 3i23_A 5 MGFIGFGKSAN------RYHLPYVMIRETLEVKTIFDLH-V---------NEKAAAPFKEKGVNF--TADLNELLTDPEI 66 (349)
T ss_dssp EEEECCSHHHH------HTTHHHHTTCTTEEEEEEECTT-C---------CHHHHHHHHTTTCEE--ESCTHHHHSCTTC
T ss_pred EEEEccCHHHH------HHHHHHHhhCCCeEEEEEECCC-H---------HHHHHHhhCCCCCeE--ECCHHHHhcCCCC
Confidence 66777777653 1233444443 55666555433 1 122222222234333 4456778888776
Q ss_pred ceeeecCCc----hhHHHHHHhCCCEee-ccccc--chhhhHHHHHHHhcceEEecc
Q 037640 275 GGFLTHCGW----NSTLEGVCAGLPLLT-WPLFA--DQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 275 ~~~ithgG~----~s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~g~g~~l~~ 324 (398)
.+++--... .-+.+|+.+|+++++ =|+.. ++..-...++++.|+-+.+..
T Consensus 67 D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~ 123 (349)
T 3i23_A 67 ELITICTPAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQ 123 (349)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CEEEEeCCcHHHHHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 665543332 346788999999998 57653 444333344456666555543
No 158
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=23.15 E-value=2.3e+02 Score=25.38 Aligned_cols=72 Identities=11% Similarity=0.080 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHH
Q 037640 210 SQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEG 289 (398)
Q Consensus 210 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~ea 289 (398)
+.-.++++.++..+..+|...+...- +|+.+.+.....-+-+ |+++ .=...|.+....|
T Consensus 168 ~~~~~~~~~l~~~~~DliVlagym~I--------L~~~~l~~~~~~~INi-----------HpSl--LP~frG~~p~~~A 226 (302)
T 3o1l_A 168 PAFAEVSRLVGHHQADVVVLARYMQI--------LPPQLCREYAHQVINI-----------HHSF--LPSFVGAKPYHQA 226 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSCCSC--------CCTTHHHHTTTCEEEE-----------ESSC--TTSSCSSCHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEHhHhhhh--------cCHHHHhhhhCCeEEe-----------Cccc--ccCCCCccHHHHH
Confidence 33346778888777788877776532 6766666543332222 4554 5556799999999
Q ss_pred HHhCCCEeecccc
Q 037640 290 VCAGLPLLTWPLF 302 (398)
Q Consensus 290 l~~GvP~l~~P~~ 302 (398)
+..|+...++-.+
T Consensus 227 i~~G~k~tG~TvH 239 (302)
T 3o1l_A 227 SLRGVKLIGATCH 239 (302)
T ss_dssp HHHTCSEEEEEEE
T ss_pred HHcCCCeEEEEEE
Confidence 9999999888754
No 159
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=23.13 E-value=98 Score=23.90 Aligned_cols=40 Identities=8% Similarity=0.077 Sum_probs=26.4
Q ss_pred HHHHHHhhcCC--CCcEEEECCCcc--cHHHHHHHc-----CCCeEEEech
Q 037640 21 PVENLFGQLKP--QPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~--~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 62 (398)
...+.+++ . +||+||.|...+ -+..+.+.+ ++|.|+++..
T Consensus 72 ~al~~l~~--~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 72 EAVIKYKN--HYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHHHH--HGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHh--cCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEecc
Confidence 44445555 5 799999998764 455555443 5888877654
No 160
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=23.08 E-value=3.4e+02 Score=22.89 Aligned_cols=69 Identities=14% Similarity=0.192 Sum_probs=46.3
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHh
Q 037640 213 MELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCA 292 (398)
Q Consensus 213 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~ 292 (398)
.++++.++..+..++...+...- +|+.+.+.....-+-+ |+++ .=.+-|.+.+..|+.+
T Consensus 79 ~~~~~~l~~~~~Dlivlagy~~i--------L~~~~l~~~~~~~iNi-----------HpSL--LP~yrG~~pi~~Ai~~ 137 (215)
T 3da8_A 79 VAITAATAAHEPDLVVSAGFMRI--------LGPQFLSRFYGRTLNT-----------HPAL--LPAFPGTHGVADALAY 137 (215)
T ss_dssp HHHHHHHHTTCCSEEEEEECCSC--------CCHHHHHHHTTTEEEE-----------ESSC--TTSSCSTTHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEcCchhh--------CCHHHHhhccCCeEEe-----------Cccc--ccCCCCchHHHHHHHc
Confidence 35777777777777777776532 6766665544332222 4444 4445689999999999
Q ss_pred CCCEeecccc
Q 037640 293 GLPLLTWPLF 302 (398)
Q Consensus 293 GvP~l~~P~~ 302 (398)
|....++-.+
T Consensus 138 G~~~tGvTvh 147 (215)
T 3da8_A 138 GVKVTGATVH 147 (215)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9998887654
No 161
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=23.05 E-value=95 Score=26.91 Aligned_cols=44 Identities=7% Similarity=0.030 Sum_probs=31.9
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCc---------ccHHHHHHHcCCCeEEEech
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCL---------PYTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~---------~~~~~vA~~lgIP~v~~~~~ 62 (398)
.+.+.+.++++..++|+||+|... ....++|+.++.|++.+...
T Consensus 118 ~~~I~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~ 170 (242)
T 3qxc_A 118 TDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHD 170 (242)
T ss_dssp HHHHHHHHHHGGGTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcC
Confidence 345666666555689999998732 24478899999999987554
No 162
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=22.98 E-value=40 Score=29.87 Aligned_cols=29 Identities=7% Similarity=-0.003 Sum_probs=24.3
Q ss_pred CcceeeecCCchhHHHHHHh------CCCEeeccc
Q 037640 273 SVGGFLTHCGWNSTLEGVCA------GLPLLTWPL 301 (398)
Q Consensus 273 ~~~~~ithgG~~s~~eal~~------GvP~l~~P~ 301 (398)
...++|+=||-||+++++.. ++|++++|.
T Consensus 35 ~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 35 EPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 34559999999999999765 899999985
No 163
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=22.74 E-value=80 Score=30.27 Aligned_cols=36 Identities=25% Similarity=0.349 Sum_probs=29.2
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCcccHHHHHHHcCCCeEEE
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCLPYTAQIAGKFNVPRIAF 59 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~~~~~~vA~~lgIP~v~~ 59 (398)
...+.+++++ .++|++|.+. .+..+|+++|||++.+
T Consensus 374 ~~~l~~~i~~--~~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 374 FFDVHQWIKN--EGVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHHH--SCCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHh--cCCCEEEeCc---chHHHHHHcCCCEEEe
Confidence 4557778888 8999999885 3677899999999964
No 164
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=22.42 E-value=94 Score=27.14 Aligned_cols=39 Identities=13% Similarity=0.345 Sum_probs=30.8
Q ss_pred CceEEEeeCCcccCCHHHHHHHHHHHHh--CCCCEEEEEeC
Q 037640 194 KSVVYACLGSMCNLIPSQMMELGLGLEA--SNRPFIWVIRE 232 (398)
Q Consensus 194 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~--~~~~~i~~~~~ 232 (398)
+.+|++++||......+.+..+.+.+++ .+..|-|.+-.
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 3599999999887666678888888876 36789888754
No 165
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=22.40 E-value=1.8e+02 Score=28.43 Aligned_cols=28 Identities=14% Similarity=0.141 Sum_probs=23.2
Q ss_pred CcceeeecCCch------hHHHHHHhCCCEeecc
Q 037640 273 SVGGFLTHCGWN------STLEGVCAGLPLLTWP 300 (398)
Q Consensus 273 ~~~~~ithgG~~------s~~eal~~GvP~l~~P 300 (398)
+.+++++|.|-| .++||-+.++|+|++-
T Consensus 71 ~pgv~~~TsGpG~~N~~~gia~A~~d~vPll~it 104 (556)
T 3hww_A 71 QPVAVIVTSGTAVANLYPALIEAGLTGEKLILLT 104 (556)
T ss_dssp SCEEEEECSSHHHHTTHHHHHHHHHHCCCEEEEE
T ss_pred CCEEEEECCCcHHHhhhHHHHHHHHhCCCeEEEe
Confidence 345599999954 8999999999999984
No 166
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=22.16 E-value=1.6e+02 Score=28.82 Aligned_cols=26 Identities=19% Similarity=0.276 Sum_probs=22.1
Q ss_pred ceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 275 GGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 275 ~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
+++++|.|- +.++||-+.++|+|++-
T Consensus 72 gv~~~TsGpG~~N~~~gi~~A~~~~vPll~it 103 (564)
T 2q28_A 72 GICLTVSAPGFLNGLTALANATVNGFPMIMIS 103 (564)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEccCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 349999985 57889999999999985
No 167
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=22.13 E-value=4.4e+02 Score=23.80 Aligned_cols=108 Identities=14% Similarity=0.045 Sum_probs=61.0
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCc
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSV 274 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~ 274 (398)
+.+|.+|.++. ..+.++.+. +..++.+...+. +.. +.....++ ..+-...++|..+.+
T Consensus 8 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~-----------~~~-~~a~~~g~--~~~~~~~~ll~~~~~ 66 (359)
T 3e18_A 8 LVIVGYGGMGS-------YHVTLASAADNLEVHGVFDILA-----------EKR-EAAAQKGL--KIYESYEAVLADEKV 66 (359)
T ss_dssp EEEECCSHHHH-------HHHHHHHTSTTEEEEEEECSSH-----------HHH-HHHHTTTC--CBCSCHHHHHHCTTC
T ss_pred EEEECcCHHHH-------HHHHHHHhCCCcEEEEEEcCCH-----------HHH-HHHHhcCC--ceeCCHHHHhcCCCC
Confidence 77888887662 344556655 455555543321 111 11122343 235567788887777
Q ss_pred ceeeecCCc----hhHHHHHHhCCCEee-ccccc--chhhhHHHHHHHhcceEEecc
Q 037640 275 GGFLTHCGW----NSTLEGVCAGLPLLT-WPLFA--DQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 275 ~~~ithgG~----~s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~g~g~~l~~ 324 (398)
.+++--.-. .-+.+|+.+|++++| =|+.. ++......++++.|+-..+..
T Consensus 67 D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~ 123 (359)
T 3e18_A 67 DAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ 123 (359)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe
Confidence 666644332 346788999999998 56654 444444444456666555543
No 168
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=22.03 E-value=1.2e+02 Score=24.88 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=28.1
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEechh
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHGTC 63 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~~~ 63 (398)
....+.+.+ .+||+||.|...+ -+..+.+.+ ++|.+.++...
T Consensus 36 ~~a~~~~~~--~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 84 (225)
T 1kgs_A 36 EEGMYMALN--EPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 84 (225)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred HHHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 344455556 7899999998765 455555443 68888876553
No 169
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=21.81 E-value=1.2e+02 Score=26.31 Aligned_cols=44 Identities=7% Similarity=0.030 Sum_probs=33.1
Q ss_pred hHHHHHHHhhcCCCCcEEEECCCc----------ccHHHHHHHcCCCeEEEech
Q 037640 19 LEPVENLFGQLKPQPNCIISDVCL----------PYTAQIAGKFNVPRIAFHGT 62 (398)
Q Consensus 19 ~~~l~~~L~~~~~~~D~VI~D~~~----------~~~~~vA~~lgIP~v~~~~~ 62 (398)
.+.+.+.++++..++|+||+|... ....++|+.++.|++.+...
T Consensus 113 ~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~ 166 (251)
T 3fgn_A 113 RDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTA 166 (251)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcC
Confidence 356777777666799999999742 23467899999999987654
No 170
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=21.81 E-value=77 Score=23.76 Aligned_cols=41 Identities=20% Similarity=0.289 Sum_probs=23.8
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHH-------cCCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGK-------FNVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~-------lgIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|...+ -+..+.+. -++|.|+++..
T Consensus 36 ~~a~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 36 KEALEQIDH--HHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HHHHHHHHH--HCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred HHHHHHHhc--CCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 344455556 6899999998664 23333322 35788876554
No 171
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=21.79 E-value=1.5e+02 Score=22.15 Aligned_cols=30 Identities=17% Similarity=0.294 Sum_probs=20.9
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF 52 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l 52 (398)
...+.+++ .+||+||.|...+ .+..+++.+
T Consensus 46 ~al~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 46 DVLKFLQH--NKVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp HHHHHHHH--CCCSEEEECSSCSSSCHHHHHHHH
T ss_pred HHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHH
Confidence 34455566 7899999998764 566666665
No 172
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=21.75 E-value=1.2e+02 Score=25.83 Aligned_cols=40 Identities=18% Similarity=0.279 Sum_probs=26.5
Q ss_pred HHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc----CCCeEEEech
Q 037640 21 PVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF----NVPRIAFHGT 62 (398)
Q Consensus 21 ~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l----gIP~v~~~~~ 62 (398)
...+.+.+ .+||+||.|..++ -+..+.+.+ ++|.|+++..
T Consensus 72 ~al~~~~~--~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~ 117 (249)
T 3q9s_A 72 NGLIKARE--DHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTAR 117 (249)
T ss_dssp HHHHHHHH--SCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHHHHHhc--CCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECC
Confidence 33444555 7899999998876 345555443 5888877654
No 173
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=21.66 E-value=1.3e+02 Score=24.97 Aligned_cols=40 Identities=15% Similarity=0.320 Sum_probs=26.6
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHHc-----CCCeEEEec
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGKF-----NVPRIAFHG 61 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~l-----gIP~v~~~~ 61 (398)
....+.+++ .+||+||.|...+ .+..+.+.+ ++|.++++.
T Consensus 41 ~~a~~~~~~--~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~ 87 (233)
T 1ys7_A 41 AEALRSATE--NRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSA 87 (233)
T ss_dssp HHHHHHHHH--SCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEEC
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEc
Confidence 344455556 7899999998765 455555443 588887654
No 174
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=21.56 E-value=2.3e+02 Score=27.78 Aligned_cols=27 Identities=19% Similarity=0.199 Sum_probs=22.9
Q ss_pred cceeeecCCc------hhHHHHHHhCCCEeecc
Q 037640 274 VGGFLTHCGW------NSTLEGVCAGLPLLTWP 300 (398)
Q Consensus 274 ~~~~ithgG~------~s~~eal~~GvP~l~~P 300 (398)
.+++++|.|- +.+.||-+.++|+|++-
T Consensus 74 p~v~~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 74 AGVALVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp CEEEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 4448999985 69999999999999984
No 175
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=21.45 E-value=1.2e+02 Score=26.01 Aligned_cols=28 Identities=7% Similarity=0.107 Sum_probs=24.0
Q ss_pred CCCcEEEECCCcccHHHHHHHcCCCeEEEec
Q 037640 31 PQPNCIISDVCLPYTAQIAGKFNVPRIAFHG 61 (398)
Q Consensus 31 ~~~D~VI~D~~~~~~~~vA~~lgIP~v~~~~ 61 (398)
.++|+||.|. ....+|+++|+|.+.+.+
T Consensus 153 ~G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 153 NGTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp TTCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred CCCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 6999999884 467899999999998774
No 176
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=21.39 E-value=94 Score=25.20 Aligned_cols=28 Identities=25% Similarity=0.089 Sum_probs=23.0
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCC
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASN 223 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 223 (398)
.+|+++||....+...+...+++|.+.+
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6999999998777778888888888743
No 177
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=21.23 E-value=3.2e+02 Score=21.94 Aligned_cols=83 Identities=11% Similarity=0.076 Sum_probs=46.9
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcc
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVG 275 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~ 275 (398)
.|-|-+||.. +.+..++....|+..+.++=..+-+... .|+.+.+ |+.+.. .....+
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR--------~p~~~~~-----------~~~~a~--~~~~~~ 60 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHK--------TAEHVVS-----------MLKEYE--ALDRPK 60 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--------CHHHHHH-----------HHHHHH--TSCSCE
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC--------CHHHHHH-----------HHHHhh--hcCCCc
Confidence 4666778777 4456677778888888876555544432 4443322 221111 111234
Q ss_pred eeeecCCch----hHHHHHHhCCCEeecccc
Q 037640 276 GFLTHCGWN----STLEGVCAGLPLLTWPLF 302 (398)
Q Consensus 276 ~~ithgG~~----s~~eal~~GvP~l~~P~~ 302 (398)
+||.=.|.. ++.-+ ..-+|+|++|..
T Consensus 61 ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~ 90 (159)
T 3rg8_A 61 LYITIAGRSNALSGFVDG-FVKGATIACPPP 90 (159)
T ss_dssp EEEEECCSSCCHHHHHHH-HSSSCEEECCCC
T ss_pred EEEEECCchhhhHHHHHh-ccCCCEEEeeCC
Confidence 477777754 33333 356899999965
No 178
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=21.07 E-value=3.4e+02 Score=26.63 Aligned_cols=80 Identities=11% Similarity=-0.010 Sum_probs=44.7
Q ss_pred HHHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCc-hhhh-------hcCCCcceeeecCCc
Q 037640 212 MMELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAP-QVLI-------LSHPSVGGFLTHCGW 283 (398)
Q Consensus 212 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~p-q~~~-------L~~~~~~~~ithgG~ 283 (398)
.+.+++.|++.|.+.|+.+.+..... +-+.+.. .+++....-.. |... ....+.+++++|.|-
T Consensus 14 a~~lv~~L~~~GV~~vFg~PG~~~~~------l~dal~~---~~~i~~i~~~hE~~Aa~aAdGyAr~tG~pgv~~~TsGp 84 (578)
T 3lq1_A 14 LAAFIEELVQAGVKEAIISPGSRSTP------LALMMAE---HPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGT 84 (578)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTHH------HHHHHHH---CSSCEEEECSSHHHHHHHHHHHHHHHCCCEEEEECSSH
T ss_pred HHHHHHHHHHcCCCEEEECCCCccHH------HHHHHHh---CCCceEEEecCcHHHHHHHHHHHHhhCCCEEEEECCch
Confidence 34577777778888777765543110 2222211 22333221111 1111 111234559999995
Q ss_pred h------hHHHHHHhCCCEeecc
Q 037640 284 N------STLEGVCAGLPLLTWP 300 (398)
Q Consensus 284 ~------s~~eal~~GvP~l~~P 300 (398)
| .++||-+.++|||++-
T Consensus 85 G~~N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 85 AAANYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp HHHTTHHHHHHHHHTTCCEEEEE
T ss_pred hhhhhhHHHHHHHhcCCCeEEEe
Confidence 4 8999999999999985
No 179
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=20.94 E-value=2.1e+02 Score=19.53 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=32.0
Q ss_pred cccHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHH-hcCCchHH-HHHHHHHHH
Q 037640 339 LVKRDDVKNAVERLMDEGNDGEERRNRALNLAKMAKMAI-QEGGSSHL-NITLLLQDI 394 (398)
Q Consensus 339 ~~~~~~l~~ai~~vl~~~~~~~~~~~~a~~l~~~~~~~~-~~~g~~~~-~~~~~~~~~ 394 (398)
..+.++|.++|+++|.+.+ ...+. .+.+++.+...+ .-.-++.+ .+.+.|...
T Consensus 11 ~Psd~ei~~~I~~IL~~aD-L~tvT--~K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~ 65 (70)
T 1q1v_A 11 PPTDEELKETIKKLLASAN-LEEVT--MKQICKKVYENYPTYDLTERKDFIKTTVKEL 65 (70)
T ss_dssp CCCHHHHHHHHHHHHTTSC-GGGCC--HHHHHHHHHHHCSSSCCSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHhCC-HHHHh--HHHHHHHHHHHccCCCChHHHHHHHHHHHHH
Confidence 5789999999999997543 33333 245666666554 33434333 445555543
No 180
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=20.76 E-value=3.8e+02 Score=25.09 Aligned_cols=115 Identities=11% Similarity=0.066 Sum_probs=59.7
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhC-CCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCc
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEAS-NRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSV 274 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~ 274 (398)
+.+|..|.+.. ..++.++.+. +..++.+...+.. -.+.+.++.......+..+-...++|..+.+
T Consensus 86 igiIG~G~~g~------~~~~~~l~~~~~~~lvav~d~~~~--------~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~v 151 (433)
T 1h6d_A 86 YAIVGLGKYAL------NQILPGFAGCQHSRIEALVSGNAE--------KAKIVAAEYGVDPRKIYDYSNFDKIAKDPKI 151 (433)
T ss_dssp EEEECCSHHHH------HTHHHHTTTCSSEEEEEEECSCHH--------HHHHHHHHTTCCGGGEECSSSGGGGGGCTTC
T ss_pred EEEECCcHHHH------HHHHHHHhhCCCcEEEEEEcCCHH--------HHHHHHHHhCCCcccccccCCHHHHhcCCCC
Confidence 77888877652 1355666654 4455555543311 0111222221111001124556778887666
Q ss_pred ceeeecCC----chhHHHHHHhCCCEee-ccccc--chhhhHHHHHHHhcceEEecc
Q 037640 275 GGFLTHCG----WNSTLEGVCAGLPLLT-WPLFA--DQFTNEKLAVHLLKIGVKIGV 324 (398)
Q Consensus 275 ~~~ithgG----~~s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~g~g~~l~~ 324 (398)
.+++--.- .--+.+|+.+|++++| -|+.. ++..-...++++.|+-+.+..
T Consensus 152 D~V~iatp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~ 208 (433)
T 1h6d_A 152 DAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGY 208 (433)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred CEEEEcCCchhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEe
Confidence 66654333 2356678999999988 47754 333333333356666555543
No 181
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=20.66 E-value=1.9e+02 Score=25.72 Aligned_cols=69 Identities=17% Similarity=0.173 Sum_probs=49.7
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCchhhhhccCchhHHHHhcCCCeEEeecCchhhhhcCCCcceeeecCCchhHHHHHHh
Q 037640 213 MELGLGLEASNRPFIWVIREGETSKELKKWVVEDGFEERIKGRGLVIWDWAPQVLILSHPSVGGFLTHCGWNSTLEGVCA 292 (398)
Q Consensus 213 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~pq~~~L~~~~~~~~ithgG~~s~~eal~~ 292 (398)
.++++.++..+..+|...+...- +|+.+.+.....-+-+ |+++ .=...|.+....|+..
T Consensus 155 ~~~~~~l~~~~~Dlivlagym~i--------l~~~~l~~~~~~~iNi-----------HpSl--LP~~rG~~p~~~Ai~~ 213 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYMQI--------LSDDLSAFLSGRCINI-----------HHSF--LPGFKGAKPYHQAHTR 213 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCCSC--------CCHHHHHHHTTSEEEE-----------ESSC--TTTTCSSCHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEhhhhhhh--------cCHHHHhhccCCeEEE-----------Cccc--ccCCCCchHHHHHHHc
Confidence 45788888878888888776542 7877776654433333 4554 5556799999999999
Q ss_pred CCCEeecccc
Q 037640 293 GLPLLTWPLF 302 (398)
Q Consensus 293 GvP~l~~P~~ 302 (398)
|+...++-.+
T Consensus 214 G~k~tG~Tvh 223 (287)
T 3nrb_A 214 GVKLIGATAH 223 (287)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9999888755
No 182
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=20.52 E-value=1.3e+02 Score=21.19 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=25.8
Q ss_pred HHHHHHHhhcCCCCcEEEECCCcc--cHHHHHHH-------cCCCeEEEech
Q 037640 20 EPVENLFGQLKPQPNCIISDVCLP--YTAQIAGK-------FNVPRIAFHGT 62 (398)
Q Consensus 20 ~~l~~~L~~~~~~~D~VI~D~~~~--~~~~vA~~-------lgIP~v~~~~~ 62 (398)
....+.+++ .+||+||.|.... .+..+.+. -++|.+.++..
T Consensus 35 ~~~~~~l~~--~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 35 STALDQLDL--LQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HHHHHHHHH--HCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred HHHHHHHHh--cCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 344555566 6899999997654 34444433 35888876553
No 183
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=20.50 E-value=1e+02 Score=25.00 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=23.0
Q ss_pred eEEEeeCCcccCCHHHHHHHHHHHHhCC
Q 037640 196 VVYACLGSMCNLIPSQMMELGLGLEASN 223 (398)
Q Consensus 196 vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 223 (398)
.+|+++||....+...+...+++|++.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 4899999998777778888888888753
No 184
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=20.36 E-value=86 Score=25.87 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=22.7
Q ss_pred CCCcEEEECCCcc--cHHHHHHH---------cCCCeEEEech
Q 037640 31 PQPNCIISDVCLP--YTAQIAGK---------FNVPRIAFHGT 62 (398)
Q Consensus 31 ~~~D~VI~D~~~~--~~~~vA~~---------lgIP~v~~~~~ 62 (398)
.+||+||.|..++ -|..+++. ..+|.|+++..
T Consensus 118 ~~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~ 160 (206)
T 3mm4_A 118 LPFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGH 160 (206)
T ss_dssp CSCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESS
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECC
Confidence 3899999998775 45555543 35888887664
No 185
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=20.06 E-value=61 Score=28.05 Aligned_cols=31 Identities=16% Similarity=0.176 Sum_probs=22.7
Q ss_pred CCCcEEE-ECCCc-ccHHHHHHHcCCCeEEEec
Q 037640 31 PQPNCII-SDVCL-PYTAQIAGKFNVPRIAFHG 61 (398)
Q Consensus 31 ~~~D~VI-~D~~~-~~~~~vA~~lgIP~v~~~~ 61 (398)
..||+|| .|+.. .-+..-|.++|||+|.+.-
T Consensus 156 ~~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivD 188 (231)
T 3bbn_B 156 GLPDIVIIVDQQEEYTALRECITLGIPTICLID 188 (231)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHTTTCCEEECCC
T ss_pred cCCCEEEEeCCccccHHHHHHHHhCCCEEEEec
Confidence 3688775 67654 4677779999999998643
Done!