BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037642
(74 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2SC73|Y5068_HAHCH UPF0345 protein HCH_05068 OS=Hahella chejuensis (strain KCTC
2396) GN=HCH_05068 PE=3 SV=2
Length = 93
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYY 64
PG ++ ET ++ G + V S W F AGD IP + T+++ VAVD Y
Sbjct: 31 PGDYEFSTSQHETMTVVSGALSVKLPESESWTRFNAGDRFEIPA--NATFNLKVAVDTAY 88
>sp|Q13FB9|Y9292_BURXL UPF0345 protein Bxeno_C1292 OS=Burkholderia xenovorans (strain
LB400) GN=Bxeno_C1292 PE=3 SV=1
Length = 106
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVD 61
PG DA E + G+ ++ +GS DW +GAG+ ++P DV +D
Sbjct: 44 PGALNFGTDAAELMEVQAGQCRIRLEGSEDWKTYGAGESFSVPGNSRFDIDVVETLD 100
>sp|Q1H0L2|Y1707_METFK UPF0345 protein Mfla_1707 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=Mfla_1707 PE=3 SV=1
Length = 103
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYY 64
PG + E + G KV G SDW +GAG+ T+P S +V+ +D
Sbjct: 41 PGALTFNTGSPELMEINSGACKVRLSGESDWKAYGAGEKFTVPGNSSFDIEVTETLDYVC 100
Query: 65 KFE 67
FE
Sbjct: 101 HFE 103
>sp|Q88F51|Y4248_PSEPK UPF0345 protein PP_4248 OS=Pseudomonas putida (strain KT2440)
GN=PP_4248 PE=3 SV=1
Length = 94
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+PG+++ E +++ G + V GS +W F AGD +P + + V VD
Sbjct: 29 MAPGEYEFGTAKREIMHVVSGALTVKLPGSDNWETFNAGDKFNVPA--DSKFQLQVKVDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|A5W0W6|Y1620_PSEP1 UPF0345 protein Pput_1620 OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=Pput_1620 PE=3 SV=1
Length = 94
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+PG+++ E +++ G + V GS +W F AGD +P + + V VD
Sbjct: 29 MAPGEYEFGTAKREIMHVVSGALTVKLPGSDNWETFNAGDKFNVPA--DSKFQLQVKVDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|Q1ICG2|Y1810_PSEE4 UPF0345 protein PSEEN1810 OS=Pseudomonas entomophila (strain L48)
GN=PSEEN1810 PE=1 SV=1
Length = 94
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+PG+++ E +++ G + V GS +W +F AG +P + + VAVD
Sbjct: 29 MAPGEYEFGTAKREIMHVVSGALTVKLPGSDNWEKFAAGSQFNVPA--DSKFQLKVAVDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|C4L823|Y192_TOLAT UPF0345 protein Tola_0192 OS=Tolumonas auensis (strain DSM 9187 /
TA4) GN=Tola_0192 PE=3 SV=1
Length = 93
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+PG+++ A E +++G + V G+++W F AG +P + + + VA D
Sbjct: 29 MAPGEYEFGTGAPELMVVIRGALTVQLPGATEWQTFSAGQEFNVPG--NSKFQLKVATDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|Q5P0Z5|Y2894_AROAE UPF0345 protein AZOSEA28940 OS=Aromatoleum aromaticum (strain EbN1)
GN=AZOSEA28940 PE=3 SV=1
Length = 107
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYY 64
P A E + G +V KG S+W +GAG+ +P + ++D+ VA + Y+
Sbjct: 44 PATLTFNTGAPEIMEGVAGSCRVRLKGESEWTVYGAGESFNVPA--NSSFDIEVAGEPYH 101
>sp|B6ERS6|Y3756_ALISL UPF0345 protein VSAL_II0656 OS=Aliivibrio salmonicida (strain
LFI1238) GN=VSAL_II0656 PE=3 SV=1
Length = 93
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYY 64
PG + +A E ++ G + + +DWV F +G+ ++ S ++DV+V ++ Y
Sbjct: 31 PGSYTFGTNAAEKMTVVTGSLTIKRSSDADWVTFSSGEFFSVEG--SSSFDVNVEIETAY 88
>sp|Q4K8Z0|Y4201_PSEF5 UPF0345 protein PFL_4201 OS=Pseudomonas fluorescens (strain Pf-5
/ ATCC BAA-477) GN=PFL_4201 PE=3 SV=1
Length = 94
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+PG+++ E +++ G + V S+DW F AG +P + + + VAVD
Sbjct: 29 MAPGEYEFGTAQREIMHVVSGALTVRLPDSADWETFPAGSQFNVPA--NSKFQLKVAVDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|A4XVA3|Y2513_PSEMY UPF0345 protein Pmen_2513 OS=Pseudomonas mendocina (strain ymp)
GN=Pmen_2513 PE=3 SV=1
Length = 93
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+PG+++ E +++ G + V GS W F AG T+P + + + VAVD
Sbjct: 29 MAPGEYEFGTSQLEVMHVVAGALTVKLPGSDSWSTFEAGSNFTVPA--NSKFQLKVAVDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|B3R6D5|Y2537_CUPTR UPF0345 protein RALTA_A2537 OS=Cupriavidus taiwanensis (strain R1 /
LMG 19424) GN=RALTA_A2537 PE=3 SV=1
Length = 105
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 25/63 (39%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYY 64
P A E + G +V GS DW +GAG ++P S +V +D
Sbjct: 43 PASLTFNTGAAEIMEINAGTCRVRLAGSEDWQAYGAGQQFSVPGNSSFDIEVQETLDYVC 102
Query: 65 KFE 67
FE
Sbjct: 103 HFE 105
>sp|B1JBX3|Y3567_PSEPW UPF0345 protein PputW619_3567 OS=Pseudomonas putida (strain W619)
GN=PputW619_3567 PE=3 SV=1
Length = 94
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+PG+++ E +++ G + V GS +W F AGD + + + VAVD
Sbjct: 29 MAPGEYEFGTAKREIMHVVSGALTVKLPGSDNWETFNAGDKFNV--AADSKFQLKVAVDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|Q5JE38|GPI_PYRKO Glucose-6-phosphate isomerase OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=pgiA PE=3 SV=1
Length = 189
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 6 GKFQLKFDAEETCYLLKGKVKVY---PKGSSDWVEFGAGDLVTIP 47
G F K D E Y +KGK + P+G ++W+ G G +V +P
Sbjct: 87 GHFHAKPDRAEIYYGIKGKGGMLLQTPEGEAEWIPMGPGTVVYVP 131
>sp|Q0VL74|Y2626_ALCBS UPF0345 protein ABO_2626 OS=Alcanivorax borkumensis (strain SK2 /
ATCC 700651 / DSM 11573) GN=ABO_2626 PE=3 SV=1
Length = 94
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+PG ++ ET + G + V GS+DW F AG+ I + V VA+D
Sbjct: 29 MAPGDYEFGTSEHETMTVTSGALTVKLPGSADWQTFVAGETFEIEADQK--FQVKVAIDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|Q15VL9|Y1547_PSEA6 UPF0345 protein Patl_1547 OS=Pseudoalteromonas atlantica (strain
T6c / ATCC BAA-1087) GN=Patl_1547 PE=3 SV=1
Length = 93
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV 58
+PG+++ ET ++ G + V G S+W AG + T+ + VSV
Sbjct: 29 MAPGEYEFATSQHETMSVVSGAMTVLLPGESEWKTLTAGQVFTVDANVKFKAQVSV 84
>sp|B1YX25|Y4431_BURA4 UPF0345 protein BamMC406_4431 OS=Burkholderia ambifaria (strain
MC40-6) GN=BamMC406_4431 PE=3 SV=1
Length = 106
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47
P DA E + GK +V GSS+W +GAG+ ++P
Sbjct: 44 PCALNFGTDAAELMEVQAGKCRVKLDGSSEWQTYGAGESFSVP 86
>sp|A4JP25|Y5077_BURVG UPF0345 protein Bcep1808_5077 OS=Burkholderia vietnamiensis
(strain G4 / LMG 22486) GN=Bcep1808_5077 PE=3 SV=1
Length = 106
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47
P DA E + GK +V GSS+W +GAG+ ++P
Sbjct: 44 PCALNFGTDAPELMEVQAGKCRVKLAGSSEWQTYGAGESFSVP 86
>sp|C3K0G3|Y4399_PSEFS UPF0345 protein PFLU_4399 OS=Pseudomonas fluorescens (strain
SBW25) GN=PFLU_4399 PE=3 SV=1
Length = 94
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+PG+++ E +++ G + V +S W F AG +P + + + VAVD
Sbjct: 29 MAPGEYEFGTAQREIMHVVSGALTVKLPDASTWETFAAGSQFNVPA--NSKFQLKVAVDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|Q0B8K0|Y3969_BURCM UPF0345 protein Bamb_3969 OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=Bamb_3969 PE=3 SV=1
Length = 106
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47
P DA E + GK +V GSS+W +GAG+ ++P
Sbjct: 44 PCALNFGTDAPELMEVQAGKCRVKLDGSSEWQTYGAGESFSVP 86
>sp|B1K3J6|Y5759_BURCC UPF0345 protein Bcenmc03_5759 OS=Burkholderia cenocepacia (strain
MC0-3) GN=Bcenmc03_5759 PE=3 SV=1
Length = 106
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47
P DA E + GK +V GSS+W +GAG+ ++P
Sbjct: 44 PCALNFGTDAPELMEVQAGKCRVKLDGSSEWQTYGAGESFSVP 86
>sp|B4ELA5|Y5176_BURCJ UPF0345 protein BceJ2315_51760 OS=Burkholderia cepacia (strain
J2315 / LMG 16656) GN=BceJ2315_51760 PE=3 SV=1
Length = 106
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47
P DA E + GK +V GSS+W +GAG+ ++P
Sbjct: 44 PCALNFGTDAPELMEVQAGKCRVKLDGSSEWQTYGAGESFSVP 86
>sp|A0B0V3|Y4545_BURCH UPF0345 protein Bcen2424_4545 OS=Burkholderia cenocepacia (strain
HI2424) GN=Bcen2424_4545 PE=3 SV=1
Length = 106
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47
P DA E + GK +V GSS+W +GAG+ ++P
Sbjct: 44 PCALNFGTDAPELMEVQAGKCRVKLDGSSEWQTYGAGESFSVP 86
>sp|Q1BNU0|Y3823_BURCA UPF0345 protein Bcen_3823 OS=Burkholderia cenocepacia (strain AU
1054) GN=Bcen_3823 PE=3 SV=1
Length = 106
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47
P DA E + GK +V GSS+W +GAG+ ++P
Sbjct: 44 PCALNFGTDAPELMEVQAGKCRVKLDGSSEWQTYGAGESFSVP 86
>sp|Q397E7|Y1300_BURS3 UPF0345 protein Bcep18194_B1300 OS=Burkholderia sp. (strain 383)
GN=Bcep18194_B1300 PE=3 SV=1
Length = 106
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47
P DA E + GK +V GSS+W +GAG+ ++P
Sbjct: 44 PCALNFGTDAPELMEVQAGKCRVKLDGSSEWQTYGAGESFSVP 86
>sp|Q31FE7|Y1534_THICR UPF0345 protein Tcr_1534 OS=Thiomicrospira crunogena (strain
XCL-2) GN=Tcr_1534 PE=3 SV=1
Length = 104
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVD 61
PG+++ +A E +L G V V G + W AG+ +P +V D
Sbjct: 41 PGEYEFGTEAAEIMEMLAGDVDVLLPGETKWQSLSAGESFNVPANSKFGINVKTVAD 97
>sp|Q6IE75|BACE2_RAT Beta-secretase 2 OS=Rattus norvegicus GN=Bace2 PE=2 SV=1
Length = 514
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 12 FDAEETC-YLLKG-KVKV-YPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59
FD+E + Y KG +V V Y +GS W F DLVTIPKG + ++ V++A
Sbjct: 126 FDSESSSTYHSKGFEVTVKYTQGS--WTGFVGEDLVTIPKGFNSSFLVNIA 174
>sp|A1U4L8|Y2862_MARAV UPF0345 protein Maqu_2862 OS=Marinobacter aquaeolei (strain ATCC
700491 / DSM 11845 / VT8) GN=Maqu_2862 PE=3 SV=1
Length = 93
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGD 42
S G+++ +ET ++ G++ V G DW FGAG+
Sbjct: 29 ISAGEYEFGTSEKETMTVVSGELTVLLPGQQDWQTFGAGE 68
>sp|B3E2L0|Y1951_GEOLS UPF0345 protein Glov_1951 OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=Glov_1951 PE=3 SV=1
Length = 104
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVD 61
PG++ A E +L G++ + G + W G G +P S T V D
Sbjct: 41 PGEYTFSTGAAELMEILSGELDLQLAGETGWRRIGGGQSFEVPANSSFTMKVQTVSD 97
>sp|B0KPU9|Y3814_PSEPG UPF0345 protein PputGB1_3814 OS=Pseudomonas putida (strain GB-1)
GN=PputGB1_3814 PE=3 SV=1
Length = 94
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+PG+++ E +++ G + V GS +W F AGD + + + V VD
Sbjct: 29 MAPGEYEFGTAKREIMHVVSGALTVKLPGSDNWETFNAGDKFNV--AADSKFQLKVKVDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|A9AR64|Y4104_BURM1 UPF0345 protein Bmul_4104/BMULJ_04400 OS=Burkholderia multivorans
(strain ATCC 17616 / 249) GN=Bmul_4104 PE=3 SV=1
Length = 106
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47
P DA E + GK +V GS W +GAG+ +++P
Sbjct: 44 PCALNFGTDAPELMEVQAGKCRVKLDGSDTWQTYGAGESISVP 86
>sp|Q9KKY0|Y3770_VIBCH UPF0345 protein VC_A0970 OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=VC_A0970 PE=3 SV=2
Length = 95
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59
+PG++ A E ++KG + + +DWV F AG+ + S V VA
Sbjct: 29 MAPGQYTFGTGAPERMTVVKGALTIKRVTDADWVTFTAGEAFEVAGNSSFDLQVEVA 85
>sp|Q9JL18|BACE2_MOUSE Beta-secretase 2 OS=Mus musculus GN=Bace2 PE=2 SV=1
Length = 514
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 12 FDAEETC-YLLKG-KVKV-YPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59
FD+E + Y KG V V Y +GS W F DLVTIPKG + ++ V++A
Sbjct: 126 FDSESSSTYHSKGFDVTVKYTQGS--WTGFVGEDLVTIPKGFNSSFLVNIA 174
>sp|Q0K784|Y3062_CUPNH UPF0345 protein H16_A3062 OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=H16_A3062 PE=3 SV=2
Length = 105
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 24/62 (38%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYY 64
P A E + G +V GS DW +GAG ++P S +V +D
Sbjct: 43 PAALTFNTGAPEIMEINAGTCRVRLAGSEDWQTYGAGQQFSVPGNSSFDIEVQETLDYVC 102
Query: 65 KF 66
F
Sbjct: 103 HF 104
>sp|B2T9B1|Y6718_BURPP UPF0345 protein Bphyt_6718 OS=Burkholderia phytofirmans (strain
DSM 17436 / PsJN) GN=Bphyt_6718 PE=3 SV=1
Length = 106
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47
PG DA E + G+ ++ +GS +W + AG+ ++P
Sbjct: 44 PGALNFGTDAPELMEVQAGQCRIRLEGSDEWKTYAAGESFSVP 86
>sp|C5A5R8|GPI_THEGJ Glucose-6-phosphate isomerase OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=pgiA PE=3 SV=1
Length = 189
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 6 GKFQLKFDAEETCYLLKGKVKVY---PKGSSDWVEFGAGDLVTIP 47
G + K D E Y LKGK + P+G ++W+ G +V +P
Sbjct: 87 GHYHAKADRAEIYYALKGKGGMLLQTPEGEAEWIPMEPGTVVYVP 131
>sp|A6V7S3|Y3754_PSEA7 UPF0345 protein PSPA7_3754 OS=Pseudomonas aeruginosa (strain PA7)
GN=PSPA7_3754 PE=3 SV=1
Length = 93
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+ G+++ E +++ G + V GS +W F +G T+P + + + VA D
Sbjct: 29 MAAGEYEFGTSQLEVMHVIAGALTVRLPGSDEWQNFASGSQFTVPA--NSKFQLKVAQDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|Q186L5|Y1660_CLOD6 UPF0345 protein CD630_16600 OS=Clostridium difficile (strain 630)
GN=CD630_16600 PE=3 SV=1
Length = 105
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVD 61
PG++ EE +L G + V GS+++V + G +P S V+ VD
Sbjct: 41 PGEYTFSTREEEIMEMLAGSMDVKLPGSNEFVTYKEGQKFNVPSDSSFDLKVNEVVD 97
>sp|A1SZG8|Y3196_PSYIN UPF0345 protein Ping_3196 OS=Psychromonas ingrahamii (strain 37)
GN=Ping_3196 PE=3 SV=1
Length = 94
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 6 GKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYY 64
G++ +A E ++ G + V G++DW F AG+ + +S +DV V V Y
Sbjct: 33 GEYTFDTNAYEFMTVVNGALTVKLPGATDWKTFNAGETFEVEANVS--FDVKVKVQTAY 89
>sp|Q3IDP9|Y672_PSEHT UPF0345 protein PSHAa0672 OS=Pseudoalteromonas haloplanktis
(strain TAC 125) GN=PSHAa0672 PE=3 SV=1
Length = 104
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVD 61
PG+F + +E LL G+ + G S+W F AG+ + +S VS D
Sbjct: 41 PGEFVFDTNQKECMELLAGQWDILLPGESEWKTFNAGESFNVDANVSFKVKVSDFAD 97
>sp|Q9Y5Z0|BACE2_HUMAN Beta-secretase 2 OS=Homo sapiens GN=BACE2 PE=1 SV=1
Length = 518
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Query: 12 FDAEETC-YLLKG-KVKV-YPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59
FD E + Y KG V V Y +GS W F DLVTIPKG + ++ V++A
Sbjct: 130 FDTERSSTYRSKGFDVTVKYTQGS--WTGFVGEDLVTIPKGFNTSFLVNIA 178
>sp|C1DM65|Y2986_AZOVD UPF0345 protein Avin_29860 OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=Avin_29860 PE=3 SV=1
Length = 93
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+ G+++ E +++ G + V GS W F AG T+P + + + VA D
Sbjct: 29 MASGEYEFGTSQLEIMHVIAGALTVKLPGSEQWETFEAGSQFTVPA--NSKFQLKVATDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|Q02K58|Y4414_PSEAB UPF0345 protein PA14_44140 OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=PA14_44140 PE=3 SV=1
Length = 93
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+ G+++ E +++ G + V GS +W E+ +G T+P + + + VA D
Sbjct: 29 MAAGEYEFGTSQLEIMHVVAGALTVKLPGSDEWQEYASGSQFTVPA--NSKFQLKVAQDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|B7UVE8|Y3754_PSEA8 UPF0345 protein PLES_37541 OS=Pseudomonas aeruginosa (strain
LESB58) GN=PLES_37541 PE=3 SV=1
Length = 93
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+ G+++ E +++ G + V GS +W E+ +G T+P + + + VA D
Sbjct: 29 MAAGEYEFGTSQLEIMHVVAGALTVKLPGSDEWQEYASGSQFTVPA--NSKFQLKVAQDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|Q9I3E3|Y1574_PSEAE UPF0345 protein PA1574 OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1574 PE=3
SV=1
Length = 93
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62
+ G+++ E +++ G + V GS +W E+ +G T+P + + + VA D
Sbjct: 29 MAAGEYEFGTSQLEIMHVVAGALTVKLPGSDEWQEYASGSQFTVPA--NSKFQLKVAQDT 86
Query: 63 YY 64
Y
Sbjct: 87 AY 88
>sp|Q8D4S0|Y5219_VIBVU UPF0345 protein VV2_1219 OS=Vibrio vulnificus (strain CMCP6)
GN=VV2_1219 PE=3 SV=1
Length = 93
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59
PG + DA E ++KG + + +G +W + AG+ + S V VA
Sbjct: 31 PGNYTFGTDAPERMTVVKGALVIKREGDEEWSTYQAGEAFEVAGKSSFDLQVEVA 85
>sp|Q7MGC2|Y4047_VIBVY UPF0345 protein VVA0047 OS=Vibrio vulnificus (strain YJ016)
GN=VVA0047 PE=3 SV=1
Length = 93
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 5 PGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59
PG + DA E ++KG + + +G +W + AG+ + S V VA
Sbjct: 31 PGNYTFGTDAPERMTVVKGALVIKREGDEEWSTYQAGEAFEVAGKSSFDLQVEVA 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,065,131
Number of Sequences: 539616
Number of extensions: 1012964
Number of successful extensions: 1270
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1235
Number of HSP's gapped (non-prelim): 56
length of query: 74
length of database: 191,569,459
effective HSP length: 45
effective length of query: 29
effective length of database: 167,286,739
effective search space: 4851315431
effective search space used: 4851315431
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)