Query 037642
Match_columns 74
No_of_seqs 100 out of 1005
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 04:19:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037642.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037642hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3es4_A Uncharacterized protein 99.9 2E-24 6.7E-29 132.8 9.1 66 1-67 47-113 (116)
2 3myx_A Uncharacterized protein 99.8 7.5E-21 2.6E-25 128.5 8.9 66 1-67 172-238 (238)
3 3bcw_A Uncharacterized protein 99.8 1E-20 3.4E-25 116.6 8.0 67 1-68 54-121 (123)
4 1o5u_A Novel thermotoga mariti 99.8 1.4E-17 4.8E-22 99.3 10.1 66 1-67 36-101 (101)
5 2pyt_A Ethanolamine utilizatio 99.7 7.7E-17 2.6E-21 100.0 10.3 68 1-70 62-129 (133)
6 4axo_A EUTQ, ethanolamine util 99.6 4.1E-15 1.4E-19 94.6 10.3 67 2-70 72-138 (151)
7 3lwc_A Uncharacterized protein 99.6 4.6E-14 1.6E-18 85.8 11.0 65 2-68 46-112 (119)
8 3myx_A Uncharacterized protein 99.5 5E-14 1.7E-18 95.1 9.5 62 5-68 55-117 (238)
9 2oyz_A UPF0345 protein VPA0057 99.2 1.7E-10 5.8E-15 68.4 9.0 62 3-66 30-91 (94)
10 3fjs_A Uncharacterized protein 99.2 3.1E-10 1E-14 67.7 10.2 67 4-72 44-112 (114)
11 1v70_A Probable antibiotics sy 99.1 1.5E-09 5.1E-14 61.7 9.6 60 4-65 36-100 (105)
12 2i45_A Hypothetical protein; n 99.1 3.7E-10 1.3E-14 65.9 7.0 57 5-62 37-95 (107)
13 1yhf_A Hypothetical protein SP 99.1 2.4E-09 8.2E-14 62.7 10.6 64 4-69 48-113 (115)
14 2pfw_A Cupin 2, conserved barr 99.1 3.2E-09 1.1E-13 62.2 10.7 61 4-66 42-104 (116)
15 2ozj_A Cupin 2, conserved barr 99.1 2.1E-09 7.2E-14 63.2 9.8 54 12-67 56-109 (114)
16 3eo6_A Protein of unknown func 99.1 1.9E-09 6.5E-14 65.0 9.4 62 4-67 44-105 (106)
17 3d82_A Cupin 2, conserved barr 99.1 1E-09 3.5E-14 62.7 7.7 48 14-63 50-97 (102)
18 2o8q_A Hypothetical protein; c 99.0 2E-09 6.9E-14 64.8 8.8 60 9-69 59-118 (134)
19 3l2h_A Putative sugar phosphat 99.0 2.2E-09 7.4E-14 66.9 9.1 54 9-64 63-119 (162)
20 2opk_A Hypothetical protein; p 99.0 1.2E-09 4.3E-14 65.0 7.3 48 10-59 49-98 (112)
21 3h8u_A Uncharacterized conserv 99.0 1.4E-09 4.9E-14 64.7 7.5 55 4-59 47-104 (125)
22 4e2g_A Cupin 2 conserved barre 99.0 8.5E-09 2.9E-13 61.3 10.0 61 4-66 49-112 (126)
23 2q30_A Uncharacterized protein 99.0 6E-09 2E-13 60.2 8.6 60 4-64 41-104 (110)
24 2gu9_A Tetracenomycin polyketi 99.0 6.7E-09 2.3E-13 60.0 8.7 50 14-65 44-95 (113)
25 3i7d_A Sugar phosphate isomera 99.0 5.6E-09 1.9E-13 65.8 9.0 56 9-66 60-119 (163)
26 2fqp_A Hypothetical protein BP 99.0 1.7E-09 6E-14 62.4 5.9 50 9-58 34-83 (97)
27 3ibm_A Cupin 2, conserved barr 99.0 9.7E-09 3.3E-13 65.1 9.9 54 13-68 75-131 (167)
28 1juh_A Quercetin 2,3-dioxygena 99.0 2.7E-09 9.1E-14 74.4 7.9 58 11-69 269-326 (350)
29 4h7l_A Uncharacterized protein 98.9 3.2E-09 1.1E-13 67.8 7.5 57 8-69 60-118 (157)
30 1o4t_A Putative oxalate decarb 98.9 6.3E-09 2.2E-13 63.2 8.4 51 13-65 77-129 (133)
31 4b29_A Dimethylsulfoniopropion 98.9 1.1E-08 3.9E-13 68.2 9.9 67 4-71 140-209 (217)
32 3cew_A Uncharacterized cupin p 98.9 2.6E-08 8.9E-13 59.4 10.3 55 9-65 43-99 (125)
33 2vpv_A Protein MIF2, MIF2P; nu 98.9 1.1E-08 3.7E-13 65.8 8.6 54 10-65 106-161 (166)
34 4i4a_A Similar to unknown prot 98.9 9.1E-09 3.1E-13 61.3 7.7 43 13-57 53-95 (128)
35 3rns_A Cupin 2 conserved barre 98.9 1.5E-08 5.3E-13 66.5 9.2 62 4-67 161-225 (227)
36 2b8m_A Hypothetical protein MJ 98.9 8.6E-09 2.9E-13 60.7 7.1 45 13-59 46-91 (117)
37 1rc6_A Hypothetical protein YL 98.9 1.2E-08 4.1E-13 68.1 8.6 50 8-59 194-243 (261)
38 1lr5_A Auxin binding protein 1 98.9 4.1E-08 1.4E-12 61.1 10.2 59 9-68 57-125 (163)
39 3hqx_A UPF0345 protein aciad03 98.9 2.5E-08 8.7E-13 60.5 8.8 61 4-66 45-107 (111)
40 1y9q_A Transcriptional regulat 98.9 2.7E-08 9.1E-13 63.2 9.3 46 12-59 124-169 (192)
41 1dgw_A Canavalin; duplicated s 98.8 2E-08 6.9E-13 64.1 8.6 55 4-58 49-107 (178)
42 3rns_A Cupin 2 conserved barre 98.8 2.6E-08 8.8E-13 65.5 9.3 60 4-65 45-106 (227)
43 2oa2_A BH2720 protein; 1017534 98.8 2E-08 6.7E-13 61.9 8.1 55 9-65 59-121 (148)
44 2bnm_A Epoxidase; oxidoreducta 98.8 2E-08 6.7E-13 64.0 8.4 53 12-64 138-195 (198)
45 3ht1_A REMF protein; cupin fol 98.8 1.3E-08 4.4E-13 61.5 6.5 52 13-66 58-113 (145)
46 1vj2_A Novel manganese-contain 98.8 3.3E-08 1.1E-12 59.3 8.3 51 13-65 67-119 (126)
47 3kgz_A Cupin 2 conserved barre 98.8 4.9E-08 1.7E-12 61.4 9.1 55 13-69 63-119 (156)
48 1y3t_A Hypothetical protein YX 98.8 4.8E-08 1.7E-12 66.2 9.5 49 9-59 62-110 (337)
49 1y3t_A Hypothetical protein YX 98.8 4.5E-08 1.5E-12 66.4 9.1 56 9-66 234-290 (337)
50 2vqa_A SLL1358 protein, MNCA; 98.8 7.1E-08 2.4E-12 66.4 10.2 65 4-68 60-132 (361)
51 1sfn_A Conserved hypothetical 98.8 2.8E-08 9.5E-13 66.1 7.8 56 11-68 183-238 (246)
52 1fi2_A Oxalate oxidase, germin 98.8 7E-08 2.4E-12 62.4 9.2 60 9-68 88-155 (201)
53 3h7j_A Bacilysin biosynthesis 98.8 9.7E-08 3.3E-12 63.2 10.0 53 13-67 165-219 (243)
54 3jzv_A Uncharacterized protein 98.8 3.4E-08 1.1E-12 62.8 7.2 54 13-68 72-127 (166)
55 3d0j_A Uncharacterized protein 98.8 3.9E-08 1.3E-12 61.8 7.4 58 8-65 44-107 (140)
56 1x82_A Glucose-6-phosphate iso 98.7 7.2E-08 2.5E-12 62.1 8.8 55 13-67 95-154 (190)
57 1sfn_A Conserved hypothetical 98.7 6.5E-08 2.2E-12 64.4 8.8 51 14-66 68-118 (246)
58 1sq4_A GLXB, glyoxylate-induce 98.7 5.8E-08 2E-12 65.9 8.2 53 12-66 88-142 (278)
59 1rc6_A Hypothetical protein YL 98.7 7.3E-08 2.5E-12 64.3 8.4 52 13-66 80-133 (261)
60 2arc_A ARAC, arabinose operon 98.7 2.1E-07 7.3E-12 56.6 9.8 53 12-66 36-91 (164)
61 1sef_A Conserved hypothetical 98.7 6.6E-08 2.3E-12 65.0 8.1 45 13-59 202-246 (274)
62 1yfu_A 3-hydroxyanthranilate-3 98.7 1.1E-07 3.6E-12 61.7 8.2 63 8-70 48-113 (174)
63 3es1_A Cupin 2, conserved barr 98.7 4.9E-08 1.7E-12 62.9 6.5 53 13-67 98-152 (172)
64 2cav_A Protein (canavalin); vi 98.7 2.9E-07 9.8E-12 66.5 11.2 65 4-68 94-165 (445)
65 2ea7_A 7S globulin-1; beta bar 98.7 2.3E-07 7.8E-12 66.7 10.5 64 4-67 69-139 (434)
66 2f4p_A Hypothetical protein TM 98.7 1.1E-07 3.8E-12 58.7 7.5 45 13-59 67-112 (147)
67 1sef_A Conserved hypothetical 98.7 1.1E-07 3.7E-12 64.0 8.0 52 13-66 83-136 (274)
68 4e2q_A Ureidoglycine aminohydr 98.7 8.8E-08 3E-12 65.4 7.3 53 12-65 88-140 (266)
69 1juh_A Quercetin 2,3-dioxygena 98.7 9E-08 3.1E-12 66.7 7.6 62 8-69 65-129 (350)
70 1uij_A Beta subunit of beta co 98.6 3.1E-07 1.1E-11 65.7 10.4 63 4-67 57-127 (416)
71 1vr3_A Acireductone dioxygenas 98.6 1.8E-07 6.3E-12 61.2 8.3 50 9-59 100-152 (191)
72 2xlg_A SLL1785 protein, CUCA; 98.6 4.2E-08 1.4E-12 65.8 5.2 50 8-59 58-127 (239)
73 1zvf_A 3-hydroxyanthranilate 3 98.6 5.3E-08 1.8E-12 63.2 5.4 64 4-68 42-113 (176)
74 4e2q_A Ureidoglycine aminohydr 98.6 1.6E-07 5.4E-12 64.1 8.0 55 12-68 205-259 (266)
75 3h7j_A Bacilysin biosynthesis 98.6 3.7E-07 1.3E-11 60.4 8.8 54 4-59 42-98 (243)
76 1j58_A YVRK protein; cupin, de 98.6 8.6E-07 2.9E-11 61.6 10.7 54 4-59 87-147 (385)
77 3fz3_A Prunin; TREE NUT allerg 98.6 7.2E-07 2.5E-11 65.8 10.6 65 4-68 402-473 (531)
78 2d5f_A Glycinin A3B4 subunit; 98.6 9.1E-07 3.1E-11 64.6 10.9 61 8-68 382-446 (493)
79 3c3v_A Arachin ARAH3 isoform; 98.6 7.2E-07 2.5E-11 65.5 10.3 66 4-69 380-452 (510)
80 2vqa_A SLL1358 protein, MNCA; 98.6 4.7E-07 1.6E-11 62.3 8.9 50 9-58 250-302 (361)
81 1fxz_A Glycinin G1; proglycini 98.5 6.6E-07 2.3E-11 65.1 9.9 64 4-67 346-416 (476)
82 2ozi_A Hypothetical protein RP 98.5 4.8E-08 1.7E-12 57.4 3.1 64 2-65 23-90 (98)
83 1j58_A YVRK protein; cupin, de 98.5 5.6E-07 1.9E-11 62.6 8.1 50 9-58 273-325 (385)
84 2e9q_A 11S globulin subunit be 98.5 1.9E-06 6.5E-11 62.5 10.9 54 4-57 330-390 (459)
85 1sq4_A GLXB, glyoxylate-induce 98.5 3.3E-07 1.1E-11 62.1 6.3 52 12-65 210-261 (278)
86 2d40_A Z3393, putative gentisa 98.5 1.1E-06 3.8E-11 61.4 8.8 49 9-60 284-332 (354)
87 2d40_A Z3393, putative gentisa 98.4 5.1E-07 1.8E-11 63.1 6.7 52 4-58 108-163 (354)
88 2phl_A Phaseolin; plant SEED s 98.4 2.5E-06 8.4E-11 60.9 10.0 57 4-60 247-316 (397)
89 1zrr_A E-2/E-2' protein; nicke 98.4 1.9E-07 6.4E-12 60.5 3.3 49 9-59 96-147 (179)
90 3lag_A Uncharacterized protein 98.4 1.1E-07 3.8E-12 55.6 1.9 57 3-59 24-84 (98)
91 3ksc_A LEGA class, prolegumin; 98.4 4.4E-06 1.5E-10 61.2 10.3 55 4-58 366-427 (496)
92 3kgl_A Cruciferin; 11S SEED gl 98.4 6E-06 2E-10 60.1 10.8 55 4-58 331-392 (466)
93 3bu7_A Gentisate 1,2-dioxygena 98.4 3.1E-06 1E-10 60.5 9.1 43 14-58 314-356 (394)
94 2e9q_A 11S globulin subunit be 98.3 5.5E-06 1.9E-10 60.1 10.5 66 4-70 71-165 (459)
95 1uij_A Beta subunit of beta co 98.3 3.9E-06 1.3E-10 60.0 9.6 59 4-62 257-335 (416)
96 1fxz_A Glycinin G1; proglycini 98.3 6.3E-06 2.2E-10 59.9 10.2 67 4-70 56-151 (476)
97 3qac_A 11S globulin SEED stora 98.3 1.1E-05 3.9E-10 58.7 11.4 54 4-57 331-391 (465)
98 2ea7_A 7S globulin-1; beta bar 98.3 7.3E-06 2.5E-10 58.9 9.7 60 4-63 274-352 (434)
99 2o1q_A Putative acetyl/propion 98.3 2.9E-06 9.9E-11 52.6 6.7 54 14-69 64-120 (145)
100 3bu7_A Gentisate 1,2-dioxygena 98.2 3.8E-06 1.3E-10 60.0 7.7 55 9-65 139-194 (394)
101 2phl_A Phaseolin; plant SEED s 98.2 9.9E-06 3.4E-10 57.8 9.6 65 4-68 60-137 (397)
102 2qnk_A 3-hydroxyanthranilate 3 98.2 2.1E-06 7.3E-11 59.2 5.9 52 8-59 44-98 (286)
103 3s7i_A Allergen ARA H 1, clone 98.2 7.3E-06 2.5E-10 58.8 8.6 55 4-58 52-110 (418)
104 3nw4_A Gentisate 1,2-dioxygena 98.2 7.8E-06 2.7E-10 58.0 8.2 46 14-61 299-344 (368)
105 3nw4_A Gentisate 1,2-dioxygena 98.2 5.1E-06 1.8E-10 58.9 7.3 54 4-60 111-168 (368)
106 2d5f_A Glycinin A3B4 subunit; 98.2 2.2E-05 7.4E-10 57.4 10.3 67 4-70 53-151 (493)
107 2qnk_A 3-hydroxyanthranilate 3 98.1 1.3E-05 4.4E-10 55.3 7.9 53 13-67 225-277 (286)
108 3qac_A 11S globulin SEED stora 98.1 1.8E-05 6.3E-10 57.6 8.7 66 4-70 58-168 (465)
109 3ksc_A LEGA class, prolegumin; 98.1 4.2E-05 1.4E-09 56.0 10.1 65 4-69 54-147 (496)
110 3gbg_A TCP pilus virulence reg 98.1 1.3E-05 4.3E-10 52.9 6.7 53 12-65 27-84 (276)
111 3c3v_A Arachin ARAH3 isoform; 98.0 5.2E-05 1.8E-09 55.7 9.9 67 4-70 56-164 (510)
112 2cav_A Protein (canavalin); vi 98.0 5.7E-05 1.9E-09 54.5 9.8 57 4-60 289-362 (445)
113 3s7i_A Allergen ARA H 1, clone 98.0 4.9E-05 1.7E-09 54.5 8.9 57 4-60 271-358 (418)
114 1eyb_A Homogentisate 1,2-dioxy 98.0 4.8E-05 1.6E-09 55.5 8.6 61 7-70 171-231 (471)
115 2y0o_A Probable D-lyxose ketol 97.9 0.00036 1.2E-08 45.0 11.2 44 14-57 80-142 (175)
116 3cjx_A Protein of unknown func 97.9 4.1E-05 1.4E-09 48.7 6.3 53 13-68 62-118 (165)
117 3st7_A Capsular polysaccharide 97.7 0.00011 3.8E-09 50.0 7.2 58 8-66 287-353 (369)
118 3ebr_A Uncharacterized RMLC-li 97.7 7.7E-05 2.6E-09 47.1 5.4 53 13-69 61-117 (159)
119 3kgl_A Cruciferin; 11S SEED gl 97.7 0.00055 1.9E-08 49.9 10.2 35 36-70 147-183 (466)
120 2q1z_B Anti-sigma factor CHRR, 97.5 0.00012 4.1E-09 47.3 4.4 45 13-63 144-190 (195)
121 2wfp_A Mannose-6-phosphate iso 97.3 0.0018 6E-08 46.1 8.8 48 6-55 334-382 (394)
122 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.2 0.0042 1.4E-07 38.6 8.7 53 8-60 50-105 (141)
123 3bal_A Acetylacetone-cleaving 97.1 0.0018 6E-08 40.9 6.1 65 4-68 54-121 (153)
124 3o14_A Anti-ecfsigma factor, C 97.1 0.003 1E-07 41.7 7.5 55 4-65 51-107 (223)
125 3ejk_A DTDP sugar isomerase; Y 97.0 0.0083 2.8E-07 38.4 9.2 61 8-68 68-142 (174)
126 1zx5_A Mannosephosphate isomer 96.9 0.013 4.5E-07 40.1 9.5 40 13-55 246-287 (300)
127 1qwr_A Mannose-6-phosphate iso 96.8 0.01 3.5E-07 40.9 8.9 45 13-60 268-312 (319)
128 2qjv_A Uncharacterized IOLB-li 96.8 0.015 5E-07 39.7 9.4 61 8-71 42-113 (270)
129 3fz3_A Prunin; TREE NUT allerg 96.8 0.017 5.7E-07 42.8 10.1 36 35-70 173-210 (531)
130 1pmi_A PMI, phosphomannose iso 96.5 0.016 5.5E-07 41.7 8.2 46 12-57 377-423 (440)
131 1ywk_A 4-deoxy-L-threo-5-hexos 96.4 0.011 3.6E-07 40.9 6.3 56 13-71 77-137 (289)
132 4gjz_A Lysine-specific demethy 95.8 0.016 5.5E-07 36.7 5.0 56 4-59 132-226 (235)
133 1xru_A 4-deoxy-L-threo-5-hexos 95.5 0.038 1.3E-06 38.0 6.1 57 13-71 77-137 (282)
134 3o14_A Anti-ecfsigma factor, C 95.5 0.16 5.6E-06 33.3 8.9 46 13-65 165-210 (223)
135 2vec_A YHAK, pirin-like protei 95.4 0.1 3.4E-06 35.1 7.9 50 16-67 204-253 (256)
136 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 94.7 0.48 1.6E-05 30.3 9.7 60 8-67 63-136 (185)
137 3bpz_A Potassium/sodium hyperp 94.7 0.081 2.8E-06 32.8 5.4 62 4-67 101-169 (202)
138 2vec_A YHAK, pirin-like protei 94.6 0.096 3.3E-06 35.2 5.9 45 7-52 76-122 (256)
139 3eqe_A Putative cystein deoxyg 94.5 0.32 1.1E-05 30.7 8.0 55 4-58 77-141 (171)
140 2ixk_A DTDP-4-dehydrorhamnose 94.4 0.57 1.9E-05 30.0 9.7 60 8-67 64-137 (184)
141 3d8c_A Hypoxia-inducible facto 94.4 0.17 5.8E-06 35.0 6.9 36 34-69 261-300 (349)
142 1dgw_Y Canavalin; duplicated s 94.3 0.086 2.9E-06 30.6 4.6 32 36-69 8-39 (93)
143 1yll_A PA5104, conserved hypot 94.2 0.21 7.3E-06 32.5 6.8 51 14-66 140-193 (200)
144 1tq5_A Protein YHHW; bicupin, 94.2 0.24 8.2E-06 32.9 7.1 48 7-55 53-102 (242)
145 3esg_A HUTD, putative uncharac 94.1 0.37 1.3E-05 31.3 7.8 64 6-70 58-123 (193)
146 2yu1_A JMJC domain-containing 94.1 0.22 7.6E-06 36.0 7.3 58 3-61 203-293 (451)
147 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 94.0 0.51 1.7E-05 30.6 8.3 59 8-67 75-143 (197)
148 1yud_A Hypothetical protein SO 93.9 0.73 2.5E-05 29.3 8.9 45 12-57 67-122 (170)
149 2d93_A RAP guanine nucleotide 93.8 0.11 3.7E-06 29.9 4.4 39 5-44 47-87 (134)
150 3bb6_A Uncharacterized protein 93.7 0.37 1.3E-05 29.4 6.8 48 13-60 38-92 (127)
151 2xdv_A MYC-induced nuclear ant 93.7 0.19 6.5E-06 36.1 6.3 50 9-58 154-223 (442)
152 1wlt_A 176AA long hypothetical 93.7 0.88 3E-05 29.5 9.7 60 8-67 80-154 (196)
153 3al5_A HTYW5, JMJC domain-cont 93.6 0.13 4.4E-06 35.4 5.1 27 34-60 240-266 (338)
154 3ryk_A DTDP-4-dehydrorhamnose 93.6 0.96 3.3E-05 29.5 10.1 61 8-68 85-160 (205)
155 2gm6_A Cysteine dioxygenase ty 93.5 0.61 2.1E-05 30.2 8.0 52 4-56 87-152 (208)
156 2ptm_A Hyperpolarization-activ 93.5 0.27 9.2E-06 30.2 6.0 63 4-67 100-169 (198)
157 1tq5_A Protein YHHW; bicupin, 93.4 0.56 1.9E-05 31.1 7.8 48 14-68 181-228 (242)
158 3pna_A CAMP-dependent protein 93.0 0.35 1.2E-05 28.4 5.9 62 4-67 67-135 (154)
159 3ocp_A PRKG1 protein; serine/t 93.0 0.37 1.3E-05 27.6 5.9 62 4-67 52-120 (139)
160 1vrb_A Putative asparaginyl hy 92.8 0.12 4E-06 35.8 3.9 23 35-57 219-241 (342)
161 2qdr_A Uncharacterized protein 92.7 0.86 2.9E-05 31.4 8.0 47 14-67 112-161 (303)
162 4f8a_A Potassium voltage-gated 92.3 0.54 1.8E-05 27.3 6.0 62 4-67 56-126 (160)
163 2p17_A Pirin-like protein; GK1 92.1 1.7 5.7E-05 29.3 8.9 46 12-61 186-236 (277)
164 3k2o_A Bifunctional arginine d 92.1 0.27 9.3E-06 34.1 5.1 27 35-61 257-283 (336)
165 3ukn_A Novel protein similar t 92.0 0.5 1.7E-05 29.2 5.9 63 4-68 104-175 (212)
166 3kmh_A D-lyxose isomerase; cup 92.0 0.49 1.7E-05 31.9 6.0 40 18-59 158-197 (246)
167 1dzr_A DTDP-4-dehydrorhamnose 91.9 1.6 5.4E-05 27.9 10.0 60 8-67 62-136 (183)
168 2c0z_A NOVW; isomerase, epimer 91.6 1.9 6.6E-05 28.3 9.7 60 8-67 70-144 (216)
169 1oi6_A PCZA361.16; epimerase, 91.2 2 7E-05 27.9 10.3 60 8-67 62-136 (205)
170 1dgw_X Canavalin; duplicated s 91.2 0.29 9.9E-06 27.3 3.7 23 9-31 52-74 (79)
171 3k3o_A PHF8, PHD finger protei 91.0 0.41 1.4E-05 33.9 5.1 59 3-62 154-245 (371)
172 3kv5_D JMJC domain-containing 90.9 0.4 1.4E-05 34.9 5.1 60 3-63 273-365 (488)
173 3of1_A CAMP-dependent protein 90.8 0.37 1.3E-05 30.0 4.4 53 13-67 47-104 (246)
174 3dl3_A Tellurite resistance pr 90.4 1.8 6.3E-05 26.0 8.6 49 14-62 38-92 (119)
175 4diq_A Lysine-specific demethy 90.3 0.28 9.4E-06 36.0 3.8 55 4-58 172-252 (489)
176 2ypd_A Probable JMJC domain-co 90.1 0.48 1.6E-05 33.9 4.8 29 35-63 294-322 (392)
177 3pua_A GRC5, PHD finger protei 89.9 0.57 2E-05 33.4 5.1 59 3-62 181-272 (392)
178 2qcs_B CAMP-dependent protein 89.7 1 3.5E-05 28.9 5.9 61 5-67 69-136 (291)
179 1yll_A PA5104, conserved hypot 89.7 1.7 5.9E-05 28.1 6.9 64 5-70 52-118 (200)
180 3kv4_A PHD finger protein 8; e 89.7 0.5 1.7E-05 34.2 4.7 60 3-63 238-330 (447)
181 1zx5_A Mannosephosphate isomer 89.6 0.26 8.8E-06 33.6 3.0 21 35-55 159-179 (300)
182 3mdp_A Cyclic nucleotide-bindi 89.4 1.3 4.3E-05 25.1 5.6 63 4-67 35-111 (142)
183 3kv9_A JMJC domain-containing 89.4 0.66 2.2E-05 33.1 5.1 59 4-63 183-274 (397)
184 2p17_A Pirin-like protein; GK1 89.3 1.9 6.4E-05 29.0 7.1 45 11-56 57-101 (277)
185 1qwr_A Mannose-6-phosphate iso 89.2 0.28 9.7E-06 33.6 3.0 20 35-54 159-178 (319)
186 1upi_A DTDP-4-dehydrorhamnose 89.2 3.4 0.00012 27.3 10.7 60 8-67 81-155 (225)
187 3eln_A Cysteine dioxygenase ty 88.1 2.3 7.9E-05 27.3 6.6 53 4-56 78-144 (200)
188 3of1_A CAMP-dependent protein 88.0 1.2 4E-05 27.7 5.1 53 14-67 166-223 (246)
189 3shr_A CGMP-dependent protein 87.9 1.2 4.1E-05 28.8 5.3 52 14-67 80-136 (299)
190 1vp6_A CNBD, cyclic-nucleotide 87.5 1.2 3.9E-05 25.2 4.5 60 4-67 40-106 (138)
191 3pur_A Lysine-specific demethy 87.4 1 3.5E-05 33.4 5.1 59 4-62 304-394 (528)
192 2wfp_A Mannose-6-phosphate iso 87.3 0.53 1.8E-05 33.3 3.5 21 35-55 241-261 (394)
193 1ft9_A Carbon monoxide oxidati 87.1 3.7 0.00013 25.2 7.5 51 14-67 41-94 (222)
194 3dn7_A Cyclic nucleotide bindi 85.9 3.4 0.00012 24.7 6.3 62 5-67 37-110 (194)
195 4f7z_A RAP guanine nucleotide 85.7 1.3 4.4E-05 34.0 5.1 43 14-56 379-424 (999)
196 1o7f_A CAMP-dependent RAP1 gua 85.7 2.6 8.9E-05 29.0 6.3 41 4-44 367-409 (469)
197 4hn1_A Putative 3-epimerase in 85.1 5.9 0.0002 25.7 10.0 60 9-68 60-134 (201)
198 3dv8_A Transcriptional regulat 84.3 5.1 0.00017 24.3 6.8 63 4-67 32-107 (220)
199 2fmy_A COOA, carbon monoxide o 83.7 5.6 0.00019 24.3 8.1 60 5-67 34-98 (220)
200 1pmi_A PMI, phosphomannose iso 83.7 1.1 3.8E-05 32.2 3.7 21 35-55 267-287 (440)
201 1wgp_A Probable cyclic nucleot 83.0 0.89 3E-05 25.8 2.5 63 4-67 35-118 (137)
202 2oz6_A Virulence factor regula 82.4 5.4 0.00018 23.9 6.1 63 4-67 19-96 (207)
203 1j1l_A Pirin; beta sandwich, c 82.4 3.9 0.00013 27.7 5.9 49 7-56 52-103 (290)
204 2z69_A DNR protein; beta barre 81.9 3.5 0.00012 23.4 4.9 63 4-67 41-115 (154)
205 2qjv_A Uncharacterized IOLB-li 81.8 5.9 0.0002 26.9 6.6 37 16-53 186-230 (270)
206 1pcq_O Groes protein; chaperon 81.0 0.82 2.8E-05 26.6 1.8 18 36-53 57-74 (97)
207 2pqq_A Putative transcriptiona 81.0 5.4 0.00018 22.4 5.5 63 5-68 35-108 (149)
208 3idb_B CAMP-dependent protein 80.7 4.8 0.00017 23.4 5.3 62 5-67 68-139 (161)
209 3d0s_A Transcriptional regulat 80.6 7 0.00024 23.9 6.2 62 5-67 36-108 (227)
210 3b02_A Transcriptional regulat 80.4 4.8 0.00016 24.2 5.4 64 4-68 5-78 (195)
211 3fx3_A Cyclic nucleotide-bindi 80.3 7.2 0.00025 24.0 6.3 62 5-67 41-113 (237)
212 3ryp_A Catabolite gene activat 80.1 6.2 0.00021 23.7 5.8 62 5-67 26-99 (210)
213 1s4c_A Protein HI0227; double- 79.8 8 0.00027 23.5 9.2 60 6-65 60-148 (155)
214 4ev0_A Transcription regulator 79.2 8.2 0.00028 23.3 6.2 63 4-67 28-101 (216)
215 1zyb_A Transcription regulator 79.1 4.6 0.00016 25.1 5.1 53 14-67 61-123 (232)
216 3iwz_A CAP-like, catabolite ac 78.9 7.9 0.00027 23.6 6.1 63 4-67 40-114 (230)
217 3uss_A Putative uncharacterize 78.7 5.9 0.0002 25.7 5.6 42 14-55 93-145 (211)
218 3kmh_A D-lyxose isomerase; cup 78.5 13 0.00043 25.0 7.9 46 8-55 121-185 (246)
219 3kcc_A Catabolite gene activat 77.8 8.3 0.00028 24.4 6.1 63 4-67 75-149 (260)
220 2gau_A Transcriptional regulat 77.2 8.7 0.0003 23.5 5.9 63 4-67 39-112 (232)
221 1j1l_A Pirin; beta sandwich, c 77.0 14 0.00049 24.9 7.8 41 13-55 189-229 (290)
222 3gyd_A CNMP-BD protein, cyclic 76.3 6.1 0.00021 23.8 5.0 63 4-67 68-141 (187)
223 2qcs_B CAMP-dependent protein 75.3 8 0.00027 24.6 5.5 54 14-68 198-261 (291)
224 1o5l_A Transcriptional regulat 74.2 9 0.00031 23.3 5.4 62 5-67 29-102 (213)
225 3la7_A Global nitrogen regulat 73.0 13 0.00045 23.1 6.0 62 5-67 50-124 (243)
226 4din_B CAMP-dependent protein 73.0 1.7 5.9E-05 29.7 1.9 52 14-67 171-227 (381)
227 3shr_A CGMP-dependent protein 72.9 7.2 0.00025 25.0 4.9 53 14-67 198-260 (299)
228 2qdr_A Uncharacterized protein 71.9 21 0.00073 24.5 7.2 49 9-70 233-289 (303)
229 2zcw_A TTHA1359, transcription 71.0 6.2 0.00021 23.8 4.0 51 15-66 26-84 (202)
230 3g7d_A PHPD; non heme Fe(II) d 71.0 16 0.00056 26.1 6.5 46 18-63 358-405 (443)
231 4ava_A Lysine acetyltransferas 70.6 9.7 0.00033 24.8 5.2 63 4-67 42-114 (333)
232 3cf6_E RAP guanine nucleotide 69.8 14 0.00046 27.7 6.3 63 4-67 62-132 (694)
233 2bgc_A PRFA; bacterial infecti 69.4 10 0.00035 23.5 4.9 54 14-68 36-100 (238)
234 1ug1_A KIAA1010 protein; struc 68.0 2.7 9.4E-05 24.3 1.7 32 35-66 33-69 (92)
235 3e6c_C CPRK, cyclic nucleotide 67.7 9.8 0.00033 23.7 4.5 53 14-67 50-108 (250)
236 3tnp_B CAMP-dependent protein 67.2 12 0.00042 25.8 5.3 54 14-68 308-376 (416)
237 3e97_A Transcriptional regulat 66.8 6.2 0.00021 24.2 3.4 53 14-67 47-108 (231)
238 1we3_O CPN10(groes); chaperoni 65.9 5.2 0.00018 23.3 2.7 22 37-58 63-84 (100)
239 1uhe_A Aspartate 1-decarboxyla 65.8 0.44 1.5E-05 27.9 -2.0 31 15-46 29-61 (97)
240 2k1g_A Lipoprotein SPR; soluti 65.7 2.6 9E-05 25.5 1.4 15 37-51 67-81 (135)
241 3nx6_A 10KDA chaperonin; bacte 65.4 4.8 0.00017 23.2 2.5 23 36-58 57-79 (95)
242 4din_B CAMP-dependent protein 63.3 14 0.00047 25.1 4.9 53 14-67 289-351 (381)
243 3v2d_V 50S ribosomal protein L 63.2 13 0.00046 21.5 4.1 22 25-48 3-24 (101)
244 3anw_A GINS51, putative unchar 63.1 4.2 0.00014 25.8 2.1 33 15-48 136-169 (188)
245 3dkw_A DNR protein; CRP-FNR, H 61.8 11 0.00039 22.8 3.9 64 4-68 38-113 (227)
246 1o7f_A CAMP-dependent RAP1 gua 61.7 28 0.00095 23.8 6.2 62 5-67 72-145 (469)
247 4f7z_A RAP guanine nucleotide 61.2 23 0.0008 27.1 6.2 41 4-44 71-119 (999)
248 1v1c_A Obscurin; muscle, sarco 61.0 2.2 7.7E-05 23.5 0.4 26 34-59 22-48 (71)
249 1p3h_A 10 kDa chaperonin; beta 58.1 8.1 0.00028 22.4 2.6 23 36-58 60-82 (99)
250 3r8s_R 50S ribosomal protein L 57.7 12 0.0004 21.8 3.2 21 26-48 4-24 (103)
251 3tnp_B CAMP-dependent protein 56.2 15 0.0005 25.4 4.1 53 14-67 186-246 (416)
252 2jmz_A Hypothetical protein MJ 54.0 11 0.00036 23.5 2.8 20 37-56 120-139 (186)
253 3dkq_A PKHD-type hydroxylase S 52.1 15 0.00052 24.1 3.5 33 23-55 147-179 (243)
254 2hc8_A PACS, cation-transporti 51.6 7.5 0.00026 22.5 1.7 16 37-52 29-44 (113)
255 2kij_A Copper-transporting ATP 50.4 6.4 0.00022 23.2 1.3 16 37-52 41-56 (124)
256 1qd7_I S17 ribosomal protein; 48.7 34 0.0012 19.3 4.1 36 26-63 40-79 (89)
257 2jyx_A Lipoprotein SPR; soluti 48.3 7.1 0.00024 23.2 1.3 14 37-50 67-80 (136)
258 2l3b_A Conserved protein found 48.1 11 0.00037 23.0 2.0 26 19-47 52-77 (130)
259 1vc3_B L-aspartate-alpha-decar 47.1 0.96 3.3E-05 26.4 -2.7 27 19-46 34-63 (96)
260 3oug_A Aspartate 1-decarboxyla 46.6 1.4 4.8E-05 26.5 -2.1 28 18-46 60-90 (114)
261 1pqh_A Aspartate 1-decarboxyla 46.3 1.8 6.3E-05 26.9 -1.6 27 19-46 75-104 (143)
262 2z0t_A Putative uncharacterize 45.6 9.2 0.00031 22.5 1.4 21 25-46 22-42 (109)
263 2l7q_A Conserved protein found 43.8 16 0.00056 22.0 2.3 26 19-47 51-76 (124)
264 3plx_B Aspartate 1-decarboxyla 42.8 1.5 5.2E-05 25.8 -2.3 28 19-47 34-63 (102)
265 4dpz_X HRAS-like suppressor 2; 42.4 16 0.00055 22.2 2.2 18 37-54 7-24 (137)
266 3jxo_A TRKA-N domain protein; 41.7 19 0.00065 19.0 2.3 28 16-46 42-69 (86)
267 4dot_A Group XVI phospholipase 39.4 20 0.00067 21.9 2.3 20 36-55 6-25 (140)
268 2e9x_D GINS complex subunit 4; 39.0 53 0.0018 21.1 4.4 33 15-47 170-207 (223)
269 3gt2_A Putative uncharacterize 38.7 10 0.00035 22.7 0.9 12 37-48 89-100 (142)
270 3kw0_A Cysteine peptidase; str 38.2 36 0.0012 21.7 3.5 34 37-70 39-86 (214)
271 4e2u_A PHO RADA intein; HINT-f 37.9 51 0.0017 20.0 4.1 17 37-53 113-129 (168)
272 2r32_A GCN4-PII/tumor necrosis 35.9 24 0.00082 22.2 2.3 13 35-47 128-140 (166)
273 2c45_A Aspartate 1-decarboxyla 35.9 2.1 7.1E-05 26.5 -2.6 29 19-48 58-89 (139)
274 3erx_A Pseudoazurin; copper pr 34.2 32 0.0011 20.1 2.6 12 35-46 22-33 (123)
275 2if6_A Hypothetical protein YI 34.1 20 0.00067 22.1 1.7 14 36-49 3-16 (186)
276 1g31_A GP31; chaperone, CO-cha 33.9 13 0.00046 21.9 0.8 28 22-50 48-75 (111)
277 4dov_A ORC1, origin recognitio 33.8 60 0.0021 20.4 3.9 31 19-50 21-51 (163)
278 2ftc_O L27MT, MRP-L27, mitocho 33.3 61 0.0021 17.6 4.3 39 18-60 29-67 (69)
279 3beh_A MLL3241 protein; transm 33.0 9.1 0.00031 25.6 0.0 28 14-44 269-296 (355)
280 3tbm_A Putative uncharacterize 32.0 41 0.0014 18.1 2.6 14 19-32 18-31 (69)
281 2j58_A WZA, outer membrane lip 31.0 11 0.00037 26.1 0.1 26 35-60 218-243 (359)
282 4db5_A Tumor necrosis factor l 30.3 36 0.0012 20.6 2.3 13 35-47 87-99 (125)
283 2d8h_A SH3YL1 protein; SH3 dom 30.2 54 0.0018 17.0 2.9 30 35-64 33-65 (80)
284 1at0_A 17-hedgehog; developmen 29.9 65 0.0022 19.1 3.5 14 37-50 91-104 (145)
285 3m86_A Amoebiasin-2; cysteine 29.6 37 0.0013 19.4 2.3 26 34-59 16-45 (111)
286 3pbi_A Invasion protein; pepti 28.8 18 0.00062 23.4 0.9 13 37-49 158-170 (214)
287 2in0_A Endonuclease PI-MTUI; h 28.6 81 0.0028 18.1 3.8 14 38-51 87-100 (139)
288 4he6_A Peptidase family U32; u 28.3 75 0.0026 17.1 3.8 29 23-56 20-50 (89)
289 2rg4_A Uncharacterized protein 28.2 33 0.0011 21.8 2.1 21 36-56 171-191 (216)
290 2cio_B Inhibitor of cysteine p 28.1 68 0.0023 18.6 3.3 26 34-59 13-42 (121)
291 1e5r_A Proline oxidase; oxidor 28.1 67 0.0023 21.8 3.7 34 24-59 132-165 (290)
292 3ne0_A Resuscitation promoting 27.7 19 0.00066 23.3 0.9 13 37-49 158-170 (214)
293 2hbw_A NLP/P60 protein; NLP/P6 27.7 35 0.0012 22.2 2.1 13 37-49 160-172 (235)
294 2xxz_A Lysine-specific demethy 27.5 82 0.0028 21.8 4.1 24 36-59 281-304 (332)
295 1mi8_A DNAB intein; all beta-s 27.1 82 0.0028 18.5 3.7 12 38-49 89-100 (158)
296 2pqh_A Spectrin alpha chain, b 27.0 41 0.0014 17.6 2.0 25 35-59 18-43 (80)
297 1te7_A Hypothetical UPF0267 pr 27.0 22 0.00076 20.1 1.0 26 20-46 16-41 (103)
298 1kcq_A Gelsolin, brevin, ADF, 26.9 64 0.0022 17.9 3.0 26 36-72 24-49 (104)
299 4i1k_A B3 domain-containing tr 26.3 55 0.0019 19.7 2.8 29 37-70 116-144 (146)
300 3npf_A Putative dipeptidyl-pep 25.9 23 0.00079 23.5 1.0 12 37-48 220-231 (306)
301 1ddg_A Sulfite reductase (NADP 25.8 31 0.0011 23.7 1.7 23 26-50 35-58 (374)
302 3eoj_A Bacteriochlorophyll A p 25.8 1.6E+02 0.0054 20.4 5.1 48 17-66 77-124 (366)
303 3ef4_A Pseudoazurin, blue copp 25.7 1.1E+02 0.0036 17.9 4.6 12 35-46 23-34 (124)
304 2bz8_A SH3-domain kinase bindi 25.3 64 0.0022 15.5 2.5 24 35-58 17-41 (58)
305 1xne_A Hypothetical protein PF 24.9 24 0.00081 20.8 0.8 23 25-48 23-45 (113)
306 2iim_A Proto-oncogene tyrosine 24.8 46 0.0016 16.3 1.9 23 35-57 22-44 (62)
307 4dql_A Bifunctional P-450/NADP 24.4 37 0.0013 23.5 1.9 16 36-51 37-53 (393)
308 1tuc_A Alpha-spectrin; capping 24.2 75 0.0026 15.7 2.8 22 36-57 6-28 (63)
309 1paz_A Pseudoazurin precursor; 24.1 73 0.0025 18.4 2.9 12 35-46 22-33 (123)
310 1e0g_A Membrane-bound lytic mu 24.0 32 0.0011 15.9 1.1 12 37-48 36-47 (48)
311 2v1q_A SLA1, cytoskeleton asse 23.9 35 0.0012 16.5 1.3 24 35-58 18-43 (60)
312 3qfs_A CPR, P450R, NADPH--cyto 23.9 35 0.0012 24.4 1.7 25 25-51 84-109 (458)
313 2drm_A Acanthamoeba myosin IB; 23.9 70 0.0024 15.3 2.7 25 35-59 19-44 (58)
314 2kxd_A 11-MER peptide, SH3 dom 23.9 80 0.0027 16.0 2.8 23 35-57 15-38 (73)
315 3pfn_A NAD kinase; structural 23.8 75 0.0026 22.2 3.3 26 23-49 310-335 (365)
316 1y0m_A 1-phosphatidylinositol- 23.7 74 0.0025 15.4 2.8 25 35-59 19-44 (61)
317 1svq_A Severin; actin-binding; 23.6 37 0.0013 19.4 1.5 26 36-72 34-59 (114)
318 3d0f_A Penicillin-binding 1 tr 23.5 24 0.00083 19.8 0.7 11 38-48 84-94 (106)
319 2wgn_B Inhibitor of cysteine p 23.5 96 0.0033 18.4 3.4 26 34-59 35-64 (132)
320 2ak5_A RHO guanine nucleotide 23.4 77 0.0026 15.5 2.7 25 35-59 22-47 (64)
321 1pmy_A Pseudoazurin; electron 23.1 78 0.0027 18.2 2.9 12 35-46 22-33 (123)
322 2dnu_A RUH-061, SH3 multiple d 22.9 63 0.0022 16.2 2.3 25 35-59 24-49 (71)
323 2brf_A Bifunctional polynucleo 22.8 85 0.0029 18.2 3.0 23 34-56 83-106 (110)
324 2hbp_A Cytoskeleton assembly c 22.7 1E+02 0.0034 16.6 3.7 33 1-37 8-40 (68)
325 3p42_A Predicted protein; beta 22.7 41 0.0014 21.9 1.7 15 36-50 190-204 (236)
326 2lkt_A Retinoic acid receptor 22.5 56 0.0019 18.7 2.2 21 36-56 6-26 (125)
327 2qtl_A MSR;, methionine syntha 22.4 49 0.0017 24.1 2.3 24 26-51 138-162 (539)
328 2ux6_A Pseudoazurin; type-1 co 22.3 82 0.0028 18.1 2.9 11 36-46 23-33 (122)
329 1f20_A Nitric-oxide synthase; 22.3 27 0.00093 24.5 0.9 24 27-51 55-79 (435)
330 2k75_A Uncharacterized protein 22.2 57 0.0019 18.4 2.1 17 38-54 60-76 (106)
331 3kt9_A Aprataxin; FHA domain, 22.1 1.1E+02 0.0038 17.4 3.4 15 34-48 77-91 (102)
332 1sem_A SEM-5; SRC-homology 3 ( 22.1 78 0.0027 15.1 2.8 25 35-59 18-43 (58)
333 3j08_A COPA, copper-exporting 22.0 1.1E+02 0.0037 22.6 4.1 16 37-52 150-165 (645)
334 3rux_A BIRA bifunctional prote 21.8 66 0.0023 21.1 2.7 22 23-46 248-269 (270)
335 1uti_A GRB2-related adaptor pr 21.8 80 0.0027 15.1 2.8 25 35-59 17-42 (58)
336 2jv2_A Putative uncharacterize 21.6 96 0.0033 17.0 2.9 24 36-59 40-64 (83)
337 2g6f_X RHO guanine nucleotide 21.5 68 0.0023 15.5 2.2 24 35-58 20-44 (59)
338 2bzy_A CRK-like protein, CRKL 21.5 73 0.0025 15.9 2.3 23 35-57 19-42 (67)
339 1wxb_A Epidermal growth factor 21.5 30 0.001 17.5 0.7 23 35-57 23-45 (68)
340 2jt4_A Cytoskeleton assembly c 21.5 64 0.0022 16.2 2.1 24 35-58 22-47 (71)
341 3tu6_A Pseudoazurin (blue copp 21.3 75 0.0026 18.5 2.6 12 35-46 24-35 (127)
342 2oaw_A Spectrin alpha chain, b 21.3 85 0.0029 15.3 3.7 24 35-58 17-41 (65)
343 2zjr_O 50S ribosomal protein L 21.1 11 0.00037 21.8 -1.2 15 34-48 10-24 (100)
344 2ege_A Uncharacterized protein 21.1 97 0.0033 15.9 2.8 25 35-59 30-56 (75)
345 1vct_A Hypothetical protein PH 20.9 62 0.0021 20.2 2.3 29 16-46 151-179 (205)
346 3j09_A COPA, copper-exporting 20.8 1.2E+02 0.004 22.7 4.1 16 37-52 228-243 (723)
347 1plc_A Plastocyanin; electron 20.7 72 0.0025 17.0 2.3 12 35-46 18-29 (99)
348 3nnf_A CURA; non-HAEM Fe(II)/a 20.5 47 0.0016 23.3 1.7 25 31-55 231-255 (344)
349 2jte_A CD2-associated protein; 20.5 65 0.0022 15.8 2.0 24 35-58 22-48 (64)
350 3bbn_Q Ribosomal protein S17; 20.3 37 0.0013 20.9 1.1 27 36-62 106-136 (142)
351 2dil_A Proline-serine-threonin 20.3 95 0.0033 15.4 2.8 25 35-59 24-49 (69)
352 3e0e_A Replication protein A; 20.3 22 0.00077 19.7 0.1 14 37-51 63-76 (97)
353 2rqx_A PMRD, polymyxin B resis 20.2 22 0.00077 20.2 0.1 35 13-48 13-49 (89)
354 2ydl_A SH3 domain-containing k 20.2 42 0.0015 17.2 1.2 25 35-59 18-45 (69)
355 2ekh_A SH3 and PX domain-conta 20.2 71 0.0024 16.6 2.2 25 35-59 24-49 (80)
356 1bxv_A Plastocyanin; copper pr 20.2 76 0.0026 16.4 2.3 13 35-47 20-32 (91)
357 1zuy_A Myosin-5 isoform; SH3 d 20.1 69 0.0024 15.3 2.0 24 35-58 17-41 (58)
No 1
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=2e-24 Score=132.81 Aligned_cols=66 Identities=23% Similarity=0.392 Sum_probs=62.8
Q ss_pred CCcCCceEEEecCce-EEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEe
Q 037642 1 WGCSPGKFQLKFDAE-ETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 1 W~~~pg~~~~~~~~~-E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
|+|+||+|+++++.+ |+||||+|+++|+.++| +.++++|||+++||+|++++|++.+++||+|++.
T Consensus 47 We~tPG~~~~~~~~~~E~~~iLeG~~~lt~ddG-~~~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~~ 113 (116)
T 3es4_A 47 WMAEPGIYNYAGRDLEETFVVVEGEALYSQADA-DPVKIGPGSIVSIAKGVPSRLEILSSFRKLATVI 113 (116)
T ss_dssp EEECSEEEEECCCSEEEEEEEEECCEEEEETTC-CCEEECTTEEEEECTTCCEEEEECSCEEEEEEEE
T ss_pred EecCCceeECeeCCCcEEEEEEEeEEEEEeCCC-eEEEECCCCEEEECCCCeEEEEEeEEEeEEEEEe
Confidence 899999999998876 99999999999999998 5899999999999999999999999999999974
No 2
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.84 E-value=7.5e-21 Score=128.51 Aligned_cols=66 Identities=23% Similarity=0.481 Sum_probs=61.6
Q ss_pred CCcCCceE-EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEe
Q 037642 1 WGCSPGKF-QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 1 W~~~pg~~-~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
|+|+||++ .+.++.+|+||||||+++|+.++| +.++++|||+++||+|++++|++.+++||+|+|.
T Consensus 172 W~~tpG~~~~~~~~~~E~~~ILeG~v~lt~~~G-~~~~~~aGD~~~~P~G~~~tWev~e~vrK~Yvit 238 (238)
T 3myx_A 172 WDSTPYERISRPHKIHELMNLIEGRVVLSLENG-SSLTVNTGDTVFVAQGAPCKWTSTGYVRKFYAVT 238 (238)
T ss_dssp EEECCEEBCCEECSSCEEEEEEECCEEEEETTS-CEEEECTTCEEEECTTCEEEEEESSCEEEEEEEC
T ss_pred EEeCCCEEECCcCCCCEEEEEEEeEEEEEeCCC-CEEEECCCCEEEECCCCEEEEEECccEEEEEEeC
Confidence 89999986 466789999999999999999998 5899999999999999999999999999999984
No 3
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=99.84 E-value=1e-20 Score=116.56 Aligned_cols=67 Identities=25% Similarity=0.532 Sum_probs=62.8
Q ss_pred CCcCCceEEEecCc-eEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEec
Q 037642 1 WGCSPGKFQLKFDA-EETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 1 W~~~pg~~~~~~~~-~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~ 68 (74)
|+|+||.|.+|+.. +|++|||+|++++++++| +.+.++|||.++||+|.+|+|++.+++||+|++..
T Consensus 54 w~~~pG~~~~~~~~~~E~~~Vl~G~~~l~~~~g-~~~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv~~~ 121 (123)
T 3bcw_A 54 WESTSGSFQSNTTGYIEYCHIIEGEARLVDPDG-TVHAVKAGDAFIMPEGYTGRWEVDRHVKKIYFVTH 121 (123)
T ss_dssp EEEEEEEEECCCTTEEEEEEEEEEEEEEECTTC-CEEEEETTCEEEECTTCCCEEEEEEEEEEEEEEEE
T ss_pred EEECCCceeeEcCCCcEEEEEEEEEEEEEECCC-eEEEECCCCEEEECCCCeEEEEECCceeEEEEEEe
Confidence 89999999988887 999999999999999776 58999999999999999999999999999999864
No 4
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=99.75 E-value=1.4e-17 Score=99.26 Aligned_cols=66 Identities=41% Similarity=0.767 Sum_probs=61.5
Q ss_pred CCcCCceEEEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEe
Q 037642 1 WGCSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 1 W~~~pg~~~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
|.++||.+.++.+.+|++|||+|++++.++++ +.+.++|||+++||+|..++|...++++|+|++.
T Consensus 36 ~~~~pg~~~~hH~~~E~~~Vl~G~~~~~i~~g-~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~yv~~ 101 (101)
T 1o5u_A 36 WEKEVSEFDWYYDTNETCYILEGKVEVTTEDG-KKYVIEKGDLVTFPKGLRCRWKVLEPVRKHYNLF 101 (101)
T ss_dssp EEECSEEEEEECSSCEEEEEEEEEEEEEETTC-CEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEC
T ss_pred EEeCCCcccccCCceEEEEEEeCEEEEEECCC-CEEEECCCCEEEECCCCcEEEEeCCCeeEEEEEC
Confidence 78999999888889999999999999999844 5799999999999999999999999999999973
No 5
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.72 E-value=7.7e-17 Score=99.99 Aligned_cols=68 Identities=24% Similarity=0.325 Sum_probs=62.2
Q ss_pred CCcCCceEEEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecCC
Q 037642 1 WGCSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESTS 70 (74)
Q Consensus 1 W~~~pg~~~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~~ 70 (74)
|+++||.+++|++.+|++|||+|++++++++ +.+.++|||+++||+|..++|+..++++++|++..++
T Consensus 62 ~~~~pG~~~~h~~~~E~~~VLeG~~~l~~~g--~~~~l~~GD~i~~p~g~~h~~~~~~~~~~l~v~~p~~ 129 (133)
T 2pyt_A 62 MQWDNAFFPWTLNYDEIDMVLEGELHVRHEG--ETMIAKAGDVMFIPKGSSIEFGTPTSVRFLYVAWPAN 129 (133)
T ss_dssp EEEEEEEEEEECSSEEEEEEEEEEEEEEETT--EEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEESTT
T ss_pred EEECCCCccccCCCCEEEEEEECEEEEEECC--EEEEECCCcEEEECCCCEEEEEeCCCEEEEEEEcCCc
Confidence 5678998888989999999999999999996 5799999999999999999999999999999986553
No 6
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.63 E-value=4.1e-15 Score=94.60 Aligned_cols=67 Identities=21% Similarity=0.351 Sum_probs=59.8
Q ss_pred CcCCceEEEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecCC
Q 037642 2 GCSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESTS 70 (74)
Q Consensus 2 ~~~pg~~~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~~ 70 (74)
+++.+.++++.+.+|++|||+|++++++++ +++.++|||+++||+|.+++|...++++++|++.-+.
T Consensus 72 ~~e~~~~~~~~~~eE~~yVLeG~~~l~i~g--~~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V~~P~~ 138 (151)
T 4axo_A 72 EMKETTFDWTLNYDEIDYVIDGTLDIIIDG--RKVSASSGELIFIPKGSKIQFSVPDYARFIYVTYPAD 138 (151)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEEEEEEETT--EEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECSC
T ss_pred EEcCccccEeCCCcEEEEEEEeEEEEEECC--EEEEEcCCCEEEECCCCEEEEEeCCCEEEEEEECCCC
Confidence 445567888999999999999999999966 5899999999999999999999999999999987554
No 7
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.57 E-value=4.6e-14 Score=85.83 Aligned_cols=65 Identities=23% Similarity=0.408 Sum_probs=56.2
Q ss_pred CcCCce-EEEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEe-eeEEEEEEEec
Q 037642 2 GCSPGK-FQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVS-VAVDKYYKFES 68 (74)
Q Consensus 2 ~~~pg~-~~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~-~~~~k~y~~~~ 68 (74)
..+||. ..+|.+.+|++|||+|++++.+++ +.+.+++||.++||+|..|+|+.. ++.+++|++.-
T Consensus 46 ~~~pG~~~~~H~~~~E~~~Vl~G~~~~~~~g--~~~~l~~GD~v~ip~g~~H~~~~~~~~~~~l~v~~P 112 (119)
T 3lwc_A 46 RYAPGQSLTETMAVDDVMIVLEGRLSVSTDG--ETVTAGPGEIVYMPKGETVTIRSHEEGALTAYVTYP 112 (119)
T ss_dssp EECTTCEEEEECSSEEEEEEEEEEEEEEETT--EEEEECTTCEEEECTTCEEEEEEEEEEEEEEEEEEC
T ss_pred EECCCCCcCccCCCCEEEEEEeCEEEEEECC--EEEEECCCCEEEECCCCEEEEEcCCCCeEEEEEECC
Confidence 356774 467888999999999999999976 579999999999999999999988 77888888753
No 8
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=99.53 E-value=5e-14 Score=95.11 Aligned_cols=62 Identities=16% Similarity=0.233 Sum_probs=55.0
Q ss_pred CceEEE-ecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEec
Q 037642 5 PGKFQL-KFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 5 pg~~~~-~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~ 68 (74)
.|.+.. .++.+|++|||||+++|++ +| +++.++|||.++||+|..++|++.+++||+|+.+.
T Consensus 55 ~g~~~v~~~p~dE~~~VleG~~~lt~-~g-~~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y~~~~ 117 (238)
T 3myx_A 55 GTALSVEAYPYTEMLVMHRGSVTLTS-GT-DSVTLSTGESAVIGRGTQVRIDAQPESLWAFCAST 117 (238)
T ss_dssp CSEEEESSCSSEEEEEEEESEEEEEE-TT-EEEEEETTCEEEECTTCCEEEEECTTEEEEEEEEC
T ss_pred ccccccccCCCcEEEEEEEeEEEEEC-CC-eEEEEcCCCEEEECCCCEEEEEecCCeEEEEEecc
Confidence 344444 4778999999999999999 55 68999999999999999999999999999999876
No 9
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=99.20 E-value=1.7e-10 Score=68.35 Aligned_cols=62 Identities=24% Similarity=0.426 Sum_probs=57.0
Q ss_pred cCCceEEEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEE
Q 037642 3 CSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKF 66 (74)
Q Consensus 3 ~~pg~~~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~ 66 (74)
..||.|.+.+...|++.|++|.+++.+++..+..++++||.|.+|++.++.+++.+.. .|++
T Consensus 30 m~pGeytF~T~~~E~M~vvsG~~~V~lpg~~ew~~~~aGesF~Vpans~F~l~v~~~~--~YlC 91 (94)
T 2oyz_A 30 MLPGEYTFGTQAPERMTVVKGALVVKRVGEADWTTYSSGESFDVEGNSSFELQVKDAT--AYLC 91 (94)
T ss_dssp ECSEEEEEEESSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECSSEEEEEEESSCE--EEEE
T ss_pred EeceEEEEcCCCeEEEEEEEeEEEEEcCCCCcCEEECCCCEEEECCCCEEEEEEcccE--eEEE
Confidence 4699999999999999999999999999986789999999999999999999999885 5654
No 10
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.20 E-value=3.1e-10 Score=67.71 Aligned_cols=67 Identities=16% Similarity=0.173 Sum_probs=53.2
Q ss_pred CCceE-EEe-cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecCCCC
Q 037642 4 SPGKF-QLK-FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESTSSS 72 (74)
Q Consensus 4 ~pg~~-~~~-~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~~~~ 72 (74)
+||.. ..| .+.+|++|||+|++++.+++ +.+.+++||+++||+|..|.+...++.+.+.++-.+++-
T Consensus 44 ~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~p~~~ 112 (114)
T 3fjs_A 44 PAGKQVGSHSVAGPSTIQCLEGEVEIGVDG--AQRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLVDRG 112 (114)
T ss_dssp CTTCEEEEECCSSCEEEEEEESCEEEEETT--EEEEECTTEEEEECTTCCEEEEESSSEEEEEEEECC---
T ss_pred CCCCccCceeCCCcEEEEEEECEEEEEECC--EEEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEeCCcC
Confidence 34543 333 34689999999999999998 479999999999999999999999988777777666653
No 11
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.10 E-value=1.5e-09 Score=61.71 Aligned_cols=60 Identities=17% Similarity=0.185 Sum_probs=46.6
Q ss_pred CCce-EEEec--CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEE
Q 037642 4 SPGK-FQLKF--DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYK 65 (74)
Q Consensus 4 ~pg~-~~~~~--~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~ 65 (74)
.||. ...|. ..+|++||++|++++.+++ +.+.+++||+++||+|..|.+...+ +++.+++
T Consensus 36 ~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v 100 (105)
T 1v70_A 36 LPGQAQKVHVHEGSDKVYYALEGEVVVRVGE--EEALLAPGMAAFAPAGAPHGVRNESASPALLLVV 100 (105)
T ss_dssp CTTCEEEEECCSSCEEEEEEEESCEEEEETT--EEEEECTTCEEEECTTSCEEEECCSSSCEEEEEE
T ss_pred CCCCcCCccCCCCCcEEEEEEeCEEEEEECC--EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4554 23443 3579999999999999998 4799999999999999999998764 4433333
No 12
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.10 E-value=3.7e-10 Score=65.92 Aligned_cols=57 Identities=12% Similarity=0.218 Sum_probs=45.6
Q ss_pred CceEEEec-Cc-eEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEE
Q 037642 5 PGKFQLKF-DA-EETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62 (74)
Q Consensus 5 pg~~~~~~-~~-~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k 62 (74)
||.+.+|. +. +|++|||+|++++.++++ +.+.+++||+++||+|..|.+...++++-
T Consensus 37 ~g~~~~H~H~~~~E~~~Vl~G~~~~~~~~~-~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 95 (107)
T 2i45_A 37 LGDYGWHTHGYSDKVLFAVEGDMAVDFADG-GSMTIREGEMAVVPKSVSHRPRSENGCSL 95 (107)
T ss_dssp EEECCCBCC--CCEEEEESSSCEEEEETTS-CEEEECTTEEEEECTTCCEEEEEEEEEEE
T ss_pred CCCCcceeCCCCCEEEEEEeCEEEEEECCC-cEEEECCCCEEEECCCCcEeeEeCCCeEE
Confidence 44443332 34 899999999999999994 36999999999999999999998777543
No 13
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.09 E-value=2.4e-09 Score=62.69 Aligned_cols=64 Identities=11% Similarity=0.179 Sum_probs=51.2
Q ss_pred CCce-EEEe-cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecC
Q 037642 4 SPGK-FQLK-FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFEST 69 (74)
Q Consensus 4 ~pg~-~~~~-~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~ 69 (74)
.||. ...| .+..|++||++|++++.+++ +.+.+++||+++||+|..|.+...++.+.+.++..+
T Consensus 48 ~~g~~~~~H~H~~~e~~~vl~G~~~~~~~~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~v~~~~ 113 (115)
T 1yhf_A 48 DKGQEIGRHSSPGDAMVTILSGLAEITIDQ--ETYRVAEGQTIVMPAGIPHALYAVEAFQMLLVVVKP 113 (115)
T ss_dssp CTTCEEEEECCSSEEEEEEEESEEEEEETT--EEEEEETTCEEEECTTSCEEEEESSCEEEEEEEECS
T ss_pred CCCCccCCEECCCcEEEEEEeCEEEEEECC--EEEEECCCCEEEECCCCCEEEEECCCceEEEEEEcc
Confidence 4554 3334 35789999999999999988 479999999999999999999998887555554443
No 14
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.08 E-value=3.2e-09 Score=62.22 Aligned_cols=61 Identities=16% Similarity=0.175 Sum_probs=49.6
Q ss_pred CCceE-EEe-cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEE
Q 037642 4 SPGKF-QLK-FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKF 66 (74)
Q Consensus 4 ~pg~~-~~~-~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~ 66 (74)
.||.. ..| .+..|++|||+|.+++.+++ +.+.+++||+++||+|..|.+...++.+.+.++
T Consensus 42 ~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~v~ 104 (116)
T 2pfw_A 42 DKGAEGYVHAHRHSQVSYVVEGEFHVNVDG--VIKVLTAGDSFFVPPHVDHGAVCPTGGILIDTF 104 (116)
T ss_dssp CTTEEEEEECCSSEEEEEEEEECEEEEETT--EEEEECTTCEEEECTTCCEEEEESSCEEEEEEE
T ss_pred CCCCcCCcEECCcceEEEEEeeEEEEEECC--EEEEeCCCCEEEECcCCceeeEeCCCcEEEEEE
Confidence 45543 333 35799999999999999987 479999999999999999999998887554444
No 15
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.07 E-value=2.1e-09 Score=63.15 Aligned_cols=54 Identities=7% Similarity=0.058 Sum_probs=46.8
Q ss_pred cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEe
Q 037642 12 FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+..|++|||+|++++.+++ +.+.+++||+++||+|..|.+...++.+.+.++.
T Consensus 56 h~~~e~~~vl~G~~~~~i~~--~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~i~~ 109 (114)
T 2ozj_A 56 YFGDTLYLILQGEAVITFDD--QKIDLVPEDVLMVPAHKIHAIAGKGRFKMLQITL 109 (114)
T ss_dssp CSSCEEEEEEEEEEEEEETT--EEEEECTTCEEEECTTCCBEEEEEEEEEEEEEEE
T ss_pred CCCCeEEEEEeCEEEEEECC--EEEEecCCCEEEECCCCcEEEEeCCCcEEEEEEE
Confidence 35789999999999999998 5799999999999999999999888775555543
No 16
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=99.07 E-value=1.9e-09 Score=64.99 Aligned_cols=62 Identities=29% Similarity=0.428 Sum_probs=56.8
Q ss_pred CCceEEEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.||.|.+.....|++.|++|.+++.+.+..++.++++||.|.+|++.++..++.+.. .|++.
T Consensus 44 ~PGeY~F~T~~~E~MevvsG~l~V~LpG~~eW~~~~aGesF~VpanssF~lkv~~~t--~Y~Cs 105 (106)
T 3eo6_A 44 HPGVYTLSSEVAETIRVLSGMAYYHAEGANDVQELHAGDSMVIPANQSYRLEVMEPL--DYLLS 105 (106)
T ss_dssp CSEEEEECCSSCEEEEEEEEEEEEECTTCSSCEEEETTCEEEECSSSCEEEEEEEEE--EEEEE
T ss_pred eeeEEEecCCCcEEEEEEEeEEEEECCCCccCEEECCCCEEEECCCCcEEEEECceE--EEEEc
Confidence 489999999999999999999999999976789999999999999999999999864 67765
No 17
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.06 E-value=1e-09 Score=62.72 Aligned_cols=48 Identities=17% Similarity=0.320 Sum_probs=42.5
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEE
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKY 63 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~ 63 (74)
..|++||++|++++.+++. .+.+++||+++||+|..|.+...+..+-+
T Consensus 50 ~~e~~~v~~G~~~~~~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l 97 (102)
T 3d82_A 50 TDEVFIVMEGTLQIAFRDQ--NITLQAGEMYVIPKGVEHKPMAKEECKIM 97 (102)
T ss_dssp CCEEEEEEESEEEEECSSC--EEEEETTEEEEECTTCCBEEEEEEEEEEE
T ss_pred CcEEEEEEeCEEEEEECCE--EEEEcCCCEEEECCCCeEeeEcCCCCEEE
Confidence 4899999999999999984 69999999999999999999988765433
No 18
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.04 E-value=2e-09 Score=64.84 Aligned_cols=60 Identities=17% Similarity=0.054 Sum_probs=47.3
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecC
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFEST 69 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~ 69 (74)
++|...+|++|||+|.+++.++++ +.+.+++||+++||+|..|.+.....-.++..+..+
T Consensus 59 H~H~~~~E~~~vl~G~~~~~~~~~-~~~~l~~Gd~~~ip~g~~H~~~~~~~~~~~l~~~~p 118 (134)
T 2o8q_A 59 HTHTVGFQLFYVLRGWVEFEYEDI-GAVMLEAGGSAFQPPGVRHRELRHSDDLEVLEIVSP 118 (134)
T ss_dssp EEECCSCEEEEEEESEEEEEETTT-EEEEEETTCEEECCTTCCEEEEEECTTCEEEEEESS
T ss_pred EECCCCcEEEEEEeCEEEEEECCc-EEEEecCCCEEEECCCCcEEeEeCCCCeEEEEEECC
Confidence 455555999999999999999995 479999999999999999999884432244434444
No 19
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.04 E-value=2.2e-09 Score=66.86 Aligned_cols=54 Identities=22% Similarity=0.268 Sum_probs=45.5
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCC-CeEEEEEe--eeEEEEE
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKG-LSCTWDVS--VAVDKYY 64 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g-~~~~~~~~--~~~~k~y 64 (74)
++|...+|++|||+|++++.+++ +.+.+++||+++||+| ..|.+... ++++-+.
T Consensus 63 H~H~~~~E~~~Vl~G~~~~~~~~--~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~ 119 (162)
T 3l2h_A 63 HLHHYEEEAVYVLSGKGTLTMEN--DQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLV 119 (162)
T ss_dssp BEESSCCEEEEEEESCEEEEETT--EEEEECTTCEEEECTTSCCEEEECCSSSCEEEEE
T ss_pred ccCCCCCEEEEEEEEEEEEEECC--EEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEE
Confidence 56667899999999999999998 4799999999999998 99999874 4454333
No 20
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.02 E-value=1.2e-09 Score=65.00 Aligned_cols=48 Identities=13% Similarity=0.136 Sum_probs=43.3
Q ss_pred EecCceEEEEEEecEEEEEeCCCceE--EEECCCcEEEEcCCCeEEEEEeee
Q 037642 10 LKFDAEETCYLLKGKVKVYPKGSSDW--VEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 10 ~~~~~~E~~~vleG~~~~~~~~g~e~--~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
++.+.+|+++||+|++++.+++. . +.+++||.++||+|..|.+...+.
T Consensus 49 ~~~~~~E~~~Vl~G~~~l~~~~~--~~~~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 49 YDSPQDEWVMVVSGSAGIECEGD--TAPRVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp BCCSSEEEEEEEESCEEEEETTC--SSCEEECTTEEEEECTTCCEEEEEECS
T ss_pred ccCCccEEEEEEeCeEEEEECCE--EEEEEECCCCEEEECCCCcEEEEeCCC
Confidence 45678999999999999999995 5 899999999999999999987764
No 21
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.02 E-value=1.4e-09 Score=64.70 Aligned_cols=55 Identities=16% Similarity=0.167 Sum_probs=44.1
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeee
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
.||.. ++|....|++|||+|++++.++++ +.+.+++||+++||+|..|.+...+.
T Consensus 47 ~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~~-~~~~l~~Gd~~~i~~~~~H~~~n~~~ 104 (125)
T 3h8u_A 47 HPGQEIASHVHPHGQDTWTVISGEAEYHQGNG-IVTHLKAGDIAIAKPGQVHGAMNSGP 104 (125)
T ss_dssp CTTCEECCC-CTTCEEEEEEEECEEEEECSTT-CEEEEETTEEEEECTTCCCEEEECSS
T ss_pred CCCCcCCcccCCCCeEEEEEEEeEEEEEECCC-eEEEeCCCCEEEECCCCEEEeEeCCC
Confidence 45543 344446899999999999999444 57999999999999999999997643
No 22
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=98.99 E-value=8.5e-09 Score=61.27 Aligned_cols=61 Identities=16% Similarity=0.158 Sum_probs=48.3
Q ss_pred CCce-EEEe-cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeee-EEEEEEE
Q 037642 4 SPGK-FQLK-FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA-VDKYYKF 66 (74)
Q Consensus 4 ~pg~-~~~~-~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~-~~k~y~~ 66 (74)
.||. ...| .+..|++|||+|++++.+++ +.+.+++||+++||+|..|.+...+. .+-+.++
T Consensus 49 ~pg~~~~~H~H~~~e~~~vl~G~~~~~~~~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~l~v~ 112 (126)
T 4e2g_A 49 EPNTEMPAHEHPHEQAGVMLEGTLELTIGE--ETRVLRPGMAYTIPGGVRHRARTFEDGCLVLDIF 112 (126)
T ss_dssp CTTCEEEEECCSSEEEEEEEEECEEEEETT--EEEEECTTEEEEECTTCCEEEECCTTCEEEEEEE
T ss_pred CCCCcCCCccCCCceEEEEEEeEEEEEECC--EEEEeCCCCEEEECCCCcEEeEECCCCEEEEEEE
Confidence 3444 2333 34699999999999999988 47999999999999999999998777 5444444
No 23
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.97 E-value=6e-09 Score=60.20 Aligned_cols=60 Identities=12% Similarity=0.143 Sum_probs=46.6
Q ss_pred CCceE-EEec-C-ceEE-EEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEE
Q 037642 4 SPGKF-QLKF-D-AEET-CYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYY 64 (74)
Q Consensus 4 ~pg~~-~~~~-~-~~E~-~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y 64 (74)
.||.. ..|. + ..|+ +|||+|++++.++++ +.+.+++||+++||+|..|.+...+..+.+.
T Consensus 41 ~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~-~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l~ 104 (110)
T 2q30_A 41 KAGQELPVHSHNIEGELNIVVLEGEGEFVGDGD-AVIPAPRGAVLVAPISTPHGVRAVTDMKVLV 104 (110)
T ss_dssp CTTCEEEEECCSSSCEEEEEEEESCEEEECGGG-CEEEECTTEEEEEETTSCEEEEESSSEEEEE
T ss_pred CCCCcCCcccCCCCccEEEEEEeCEEEEEeCCC-EEEEECCCCEEEeCCCCcEEEEEcCCcEEEE
Confidence 45542 3443 2 3687 899999999999843 4799999999999999999999988865333
No 24
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=98.96 E-value=6.7e-09 Score=60.02 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=42.8
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEE
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYK 65 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~ 65 (74)
..|++||++|++++.+++ +.+.+++||+++||+|..|.+...+ +++.+++
T Consensus 44 ~~e~~~vl~G~~~~~~~~--~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v 95 (113)
T 2gu9_A 44 ADQWLFVVDGAGEAIVDG--HTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNF 95 (113)
T ss_dssp CEEEEEEEECCEEEEETT--EEEEECTTEEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEeCEEEEEECC--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 789999999999999988 4799999999999999999998754 4444433
No 25
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.96 E-value=5.6e-09 Score=65.79 Aligned_cols=56 Identities=11% Similarity=0.109 Sum_probs=45.9
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCC--CeEEEEEee--eEEEEEEE
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKG--LSCTWDVSV--AVDKYYKF 66 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g--~~~~~~~~~--~~~k~y~~ 66 (74)
++|...+|++|||+|++++.+++ +.+.+++||+++||+| ..|.+.... +++-++++
T Consensus 60 H~H~~~eE~~~Vl~G~~~~~~~~--~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~ 119 (163)
T 3i7d_A 60 HYHMEQDEFVMVTEGALVLVDDQ--GEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVG 119 (163)
T ss_dssp EEESSCCEEEEEEESCEEEEETT--EEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEE
T ss_pred ccCCCCcEEEEEEECEEEEEECC--EEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEE
Confidence 55665689999999999999998 4799999999999999 999998743 45444443
No 26
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.95 E-value=1.7e-09 Score=62.39 Aligned_cols=50 Identities=12% Similarity=-0.023 Sum_probs=42.1
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
+.|....|+.|||+|.+++.++++.+.+.+++||+++||+|..|.+....
T Consensus 34 H~H~~~~e~~~Vl~G~~~~~~~~g~~~~~l~~Gd~~~~p~~~~H~~~N~g 83 (97)
T 2fqp_A 34 HRHSMDYVVVPMTTGPLLLETPEGSVTSQLTRGVSYTRPEGVEHNVINPS 83 (97)
T ss_dssp EECCSCEEEEESSCEEEEEEETTEEEEEEECTTCCEEECTTCEEEEECCS
T ss_pred EECCCCcEEEEEeecEEEEEeCCCCEEEEEcCCCEEEeCCCCcccCEeCC
Confidence 44544467999999999999998523689999999999999999998765
No 27
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=98.95 E-value=9.7e-09 Score=65.07 Aligned_cols=54 Identities=11% Similarity=0.054 Sum_probs=45.8
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee---eEEEEEEEec
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV---AVDKYYKFES 68 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~---~~~k~y~~~~ 68 (74)
+..|++|||+|++.+.+++ +.+.+++||+++||+|..|.+...+ +++-+.++..
T Consensus 75 ~~~E~~~Vl~G~~~~~i~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~ 131 (167)
T 3ibm_A 75 EHTHVVMVVRGHAEVVLDD--RVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDS 131 (167)
T ss_dssp SSCEEEEEEESEEEEEETT--EEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEES
T ss_pred CCcEEEEEEeCEEEEEECC--EEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeC
Confidence 5899999999999999999 4799999999999999999998765 5554544443
No 28
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.95 E-value=2.7e-09 Score=74.45 Aligned_cols=58 Identities=22% Similarity=0.281 Sum_probs=51.3
Q ss_pred ecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecC
Q 037642 11 KFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFEST 69 (74)
Q Consensus 11 ~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~ 69 (74)
..+.+++++||+|++.+++++. +.+.+++||+++||+|.++++...+..++++++.+.
T Consensus 269 ~~~~~~~~~vleG~~~i~i~g~-~~~~l~~Gd~~~iPag~~h~~~~~~~~~~~l~~~~g 326 (350)
T 1juh_A 269 SFPGACAFQVQEGRVVVQIGDY-AATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSG 326 (350)
T ss_dssp CCSSCEEEEEEESCEEEEETTS-CCEEECTTCEEEECTTCCEEEEESSSSEEEEEEEES
T ss_pred cCCCcEEEEEEeeEEEEEECCe-EEEEeCCCCEEEECCCCCEEEEecCCeEEEEEEecC
Confidence 3678999999999999999995 369999999999999999999998887777777654
No 29
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.95 E-value=3.2e-09 Score=67.84 Aligned_cols=57 Identities=11% Similarity=0.036 Sum_probs=46.3
Q ss_pred EEEecCceEEEEEEe--cEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecC
Q 037642 8 FQLKFDAEETCYLLK--GKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFEST 69 (74)
Q Consensus 8 ~~~~~~~~E~~~vle--G~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~ 69 (74)
+++|....|++|||+ |++++.+++ +.+.+++||+++||+|..|++. +++ ++..+..|
T Consensus 60 ~H~H~~~~E~~yVLe~~G~g~v~idg--e~~~l~~GD~v~IPpg~~H~i~--g~l-~~L~I~~P 118 (157)
T 4h7l_A 60 THYHREHQEIYVVLDHAAHATIELNG--QSYPLTKLLAISIPPLVRHRIV--GEA-TIINIVSP 118 (157)
T ss_dssp CBBCSSCEEEEEEEEECTTCEEEETT--EEEECCTTEEEEECTTCCEEEE--SCE-EEEEEEES
T ss_pred ceECCCCcEEEEEEecCcEEEEEECC--EEEEeCCCCEEEECCCCeEeeE--CCE-EEEEEECC
Confidence 455656789999999 999999988 5799999999999999999996 454 44444443
No 30
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.94 E-value=6.3e-09 Score=63.22 Aligned_cols=51 Identities=22% Similarity=0.191 Sum_probs=43.3
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEE
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYK 65 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~ 65 (74)
+..|++|||+|++++.+++ +.+.+++||+++||+|..+.+...+ +++-+++
T Consensus 77 ~~~E~~~Vl~G~~~~~i~~--~~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 77 GEFEIYYILLGEGVFHDNG--KDVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp SEEEEEEEEESEEEEEETT--EEEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CccEEEEEEeCEEEEEECC--EEEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 3689999999999999998 5799999999999999999999764 4444443
No 31
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.93 E-value=1.1e-08 Score=68.21 Aligned_cols=67 Identities=10% Similarity=0.126 Sum_probs=55.3
Q ss_pred CCce-EEEe-cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee-eEEEEEEEecCCC
Q 037642 4 SPGK-FQLK-FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV-AVDKYYKFESTSS 71 (74)
Q Consensus 4 ~pg~-~~~~-~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~-~~~k~y~~~~~~~ 71 (74)
.||. |..| .+.+|++|||+|.++++++++ +...++|||++++|+|..|.+++.+ |+..+|+...+.+
T Consensus 140 ~PG~~yP~HsHp~EEiy~VLsG~~e~~v~~g-~~~~l~pGd~v~ipsgv~Ha~rt~dePllalwvW~G~~~ 209 (217)
T 4b29_A 140 GPGLDYGWHEHLPEELYSVVSGRALFHLRNA-PDLMLEPGQTRFHPANAPHAMTTLTDPILTLVLWRGAGL 209 (217)
T ss_dssp CSSCEEEEEECSSEEEEEEEEECEEEEETTS-CCEEECTTCEEEECTTCCEEEECCSSCEEEEEEEESTTT
T ss_pred CCCCcCCCCCCCCceEEEEEeCCEEEEECCC-CEEecCCCCEEEcCCCCceeEEECCccEEEEEEEeCCCC
Confidence 4554 4555 457999999999999999976 5899999999999999999999755 6888888766543
No 32
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.92 E-value=2.6e-08 Score=59.35 Aligned_cols=55 Identities=20% Similarity=0.185 Sum_probs=42.5
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEE
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYK 65 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~ 65 (74)
++|....+++||++|++++.+++ +.+.+++||+++||+|..+.+.... +++.+.+
T Consensus 43 H~H~~~e~~~~vl~G~~~~~i~~--~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i 99 (125)
T 3cew_A 43 HSHKQNEEIYGILSGKGFITIDG--EKIELQAGDWLRIAPDGKRQISAASDSPIGFLCI 99 (125)
T ss_dssp EEESSEEEEEEEEEEEEEEEETT--EEEEEETTEEEEECTTCCEEEEEBTTBCEEEEEE
T ss_pred ccCCCceEEEEEEeCEEEEEECC--EEEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEE
Confidence 44433345556999999999998 4799999999999999999998763 4443333
No 33
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.90 E-value=1.1e-08 Score=65.77 Aligned_cols=54 Identities=15% Similarity=0.051 Sum_probs=46.9
Q ss_pred EecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeee--EEEEEE
Q 037642 10 LKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA--VDKYYK 65 (74)
Q Consensus 10 ~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~--~~k~y~ 65 (74)
.+....|++|||+|.+++++++ +.+.|++||.++||+|..++|+-... +|-+++
T Consensus 106 ~~h~gEE~~yVLeG~v~vtl~g--~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 106 NSFRTYITFHVIQGIVEVTVCK--NKFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp ECCSEEEEEEEEESEEEEEETT--EEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cCCCceEEEEEEEeEEEEEECC--EEEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 4567899999999999999998 57999999999999999999997664 555555
No 34
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=98.89 E-value=9.1e-09 Score=61.28 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=40.3
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEe
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVS 57 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~ 57 (74)
+..|++||++|++++.+++ +.+.+++||+++||+|..+.+...
T Consensus 53 ~~~Ei~~v~~G~~~~~i~~--~~~~l~~Gd~~~i~~~~~H~~~~~ 95 (128)
T 4i4a_A 53 NEYELFIVIQGNAIIRIND--EDFPVTKGDLIIIPLDSEHHVINN 95 (128)
T ss_dssp SSEEEEEEEESEEEEEETT--EEEEEETTCEEEECTTCCEEEEEC
T ss_pred CCeEEEEEEeCEEEEEECC--EEEEECCCcEEEECCCCcEEeEeC
Confidence 6899999999999999998 479999999999999999999875
No 35
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.88 E-value=1.5e-08 Score=66.55 Aligned_cols=62 Identities=13% Similarity=0.172 Sum_probs=51.8
Q ss_pred CCceE-EEe-cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEE-eeeEEEEEEEe
Q 037642 4 SPGKF-QLK-FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDV-SVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~-~~~-~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~-~~~~~k~y~~~ 67 (74)
+||.. ..| .+.+|+.|||+|++++.+++ +.+.+++||.++||+|..|.+.. .++++.+.++-
T Consensus 161 ~~G~~~~~H~H~~~e~~~Vl~G~~~~~i~g--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ll~~v 225 (227)
T 3rns_A 161 WKGESLDPHKAPGDALVTVLDGEGKYYVDG--KPFIVKKGESAVLPANIPHAVEAETENFKMLLILV 225 (227)
T ss_dssp CTTCEEEEECCSSEEEEEEEEEEEEEEETT--EEEEEETTEEEEECTTSCEEEECCSSCEEEEEEEE
T ss_pred CCCCccCCEECCCcEEEEEEeEEEEEEECC--EEEEECCCCEEEECCCCcEEEEeCCCCEEEEEEEE
Confidence 45553 334 34689999999999999998 47999999999999999999999 88887777654
No 36
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=98.88 E-value=8.6e-09 Score=60.75 Aligned_cols=45 Identities=11% Similarity=0.202 Sum_probs=41.0
Q ss_pred CceEEEEEEecEEEEEeCCCceEE-EECCCcEEEEcCCCeEEEEEeee
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWV-EFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~-~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
+..|++||++|++++.+++. .+ .+++||+++||+|..|.+...+.
T Consensus 46 ~~~e~~~Vl~G~~~~~i~~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~ 91 (117)
T 2b8m_A 46 NSYVHLIIIKGEMTLTLEDQ--EPHNYKEGNIVYVPFNVKMLIQNINS 91 (117)
T ss_dssp SSCEEEEEEESEEEEEETTS--CCEEEETTCEEEECTTCEEEEECCSS
T ss_pred CCcEEEEEEeCEEEEEECCE--EEEEeCCCCEEEECCCCcEEeEcCCC
Confidence 67899999999999999985 57 99999999999999999997654
No 37
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.87 E-value=1.2e-08 Score=68.11 Aligned_cols=50 Identities=14% Similarity=0.135 Sum_probs=43.1
Q ss_pred EEEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeee
Q 037642 8 FQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 8 ~~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
+++|...+|+.|||+|++++.+++ +.+.+++||+++||+|..|.+...+.
T Consensus 194 ~h~H~~~~E~~~Vl~G~~~~~i~~--~~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 194 YIETHVQEHGAYILSGQGVYNLDN--NWIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EEEEESSCEEEEEEESEEEEESSS--CEEEEETTCEEEECSSEEEEEEEC--
T ss_pred cccCCCceEEEEEEEeEEEEEECC--EEEEeCCCCEEEECCCCcEEeEeCCC
Confidence 355656789999999999999998 47999999999999999999988654
No 38
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.86 E-value=4.1e-08 Score=61.10 Aligned_cols=59 Identities=20% Similarity=0.107 Sum_probs=47.3
Q ss_pred EEecCceEEEEEEecEEEEEeCCCc-------eEEEECCCcEEEEcCCCeEEEEEee---eEEEEEEEec
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSS-------DWVEFGAGDLVTIPKGLSCTWDVSV---AVDKYYKFES 68 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~-------e~~~~~~GD~v~~p~g~~~~~~~~~---~~~k~y~~~~ 68 (74)
++| +..|++||++|++++.++++. +.+.+++||+++||+|..|.+...+ +++.+.++..
T Consensus 57 H~H-~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~ 125 (163)
T 1lr5_A 57 HRH-SCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISR 125 (163)
T ss_dssp EEE-SSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEES
T ss_pred eEC-CCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECC
Confidence 455 578999999999999998821 3689999999999999999998765 5655555443
No 39
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=98.86 E-value=2.5e-08 Score=60.46 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=55.5
Q ss_pred CCce--EEEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEE
Q 037642 4 SPGK--FQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKF 66 (74)
Q Consensus 4 ~pg~--~~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~ 66 (74)
.||. |.+.+...|++-|++|.+++.+.+..+..++++|+.|.+|++.+...++.+.. .|++
T Consensus 45 ~PGe~~YtF~T~~~E~MevvsG~l~V~Lpg~~eW~~~~aGesF~VpanssF~lkv~~~~--~Y~C 107 (111)
T 3hqx_A 45 LPTEQPLTFETHVPERMEIISGECRVKIADSTESELFRAGQSFYVPGNSLFKIETDEVL--DYVC 107 (111)
T ss_dssp CCCSSCEEEECSSCEEEEEEESEEEEEETTCSSCEEEETTCEEEECTTCEEEEECSSCE--EEEE
T ss_pred eccccceEEcCCCcEEEEEEEeEEEEEcCCcccCEEeCCCCEEEECCCCcEEEEECcce--eEEE
Confidence 4888 99999999999999999999999987789999999999999999999999864 4554
No 40
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.85 E-value=2.7e-08 Score=63.25 Aligned_cols=46 Identities=17% Similarity=0.314 Sum_probs=41.4
Q ss_pred cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeee
Q 037642 12 FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
.+..|++|||+|++++.+++ +.+.+++||+++||+|..|.+...+.
T Consensus 124 h~~~E~~~Vl~G~~~~~~~~--~~~~l~~GD~i~i~~~~~H~~~n~~~ 169 (192)
T 1y9q_A 124 LGVIEYIHVLEGIMKVFFDE--QWHELQQGEHIRFFSDQPHGYAAVTE 169 (192)
T ss_dssp TTCEEEEEEEESCEEEEETT--EEEEECTTCEEEEECSSSEEEEESSS
T ss_pred CCCEEEEEEEEeEEEEEECC--EEEEeCCCCEEEEcCCCCeEeECCCC
Confidence 34689999999999999987 57999999999999999999998643
No 41
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.85 E-value=2e-08 Score=64.15 Aligned_cols=55 Identities=16% Similarity=0.209 Sum_probs=44.6
Q ss_pred CCceE--EEecCceEEEEEEecEEEEEeC--CCceEEEECCCcEEEEcCCCeEEEEEee
Q 037642 4 SPGKF--QLKFDAEETCYLLKGKVKVYPK--GSSDWVEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 4 ~pg~~--~~~~~~~E~~~vleG~~~~~~~--~g~e~~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
+||.. ..|.+.+|+.|||+|++++.+. ++.+.+.+++||+++||+|..|.+.-.+
T Consensus 49 ~pg~~~~pHh~~a~E~~yVl~G~~~v~v~~~~~~~~~~l~~GDv~~~P~g~~H~~~N~g 107 (178)
T 1dgw_A 49 KPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPD 107 (178)
T ss_dssp CTTEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECC
T ss_pred cCCcEecCcCCCCCEEEEEEeEEEEEEEEeCCCcEEEEECCCCEEEECCCCeEEEEeCC
Confidence 56653 2256789999999999999875 2225799999999999999999998864
No 42
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.84 E-value=2.6e-08 Score=65.47 Aligned_cols=60 Identities=8% Similarity=0.146 Sum_probs=49.9
Q ss_pred CCceE-EEe-cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEE
Q 037642 4 SPGKF-QLK-FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYK 65 (74)
Q Consensus 4 ~pg~~-~~~-~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~ 65 (74)
+||.- ..| .+.+++.|||+|++++++++ ++..++|||.+++|+|.+|.+...++++-+.+
T Consensus 45 ~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~~--~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 45 AKDEEITAEAMLGNRYYYCFNGNGEIFIEN--NKKTISNGDFLEITANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp CTTCEEEECSCSSCEEEEEEESEEEEEESS--CEEEEETTEEEEECSSCCEEEEESSSEEEEEE
T ss_pred CCCCccCccccCCCEEEEEEeCEEEEEECC--EEEEECCCCEEEECCCCCEEEEECCCcEEEEE
Confidence 35543 333 47899999999999999998 47999999999999999999999988765544
No 43
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.84 E-value=2e-08 Score=61.91 Aligned_cols=55 Identities=13% Similarity=0.011 Sum_probs=44.5
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceE------EEECCCcEEEEcCCCeEEEEEee--eEEEEEE
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDW------VEFGAGDLVTIPKGLSCTWDVSV--AVDKYYK 65 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~------~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~ 65 (74)
++|...+|++|||+|.+++.+++. . +.+++||+++||+|..|.+...+ +++.+.+
T Consensus 59 H~H~~~~E~~~Vl~G~~~~~i~~~--~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i 121 (148)
T 2oa2_A 59 EIHPHLDQFLRVEEGRGLVQMGHR--QDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSI 121 (148)
T ss_dssp BCCTTCEEEEEEEESEEEEEEESB--TTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred eECCCCcEEEEEEeCEEEEEECCc--cccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 344446799999999999999985 4 89999999999999999998754 4443333
No 44
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.84 E-value=2e-08 Score=63.95 Aligned_cols=53 Identities=8% Similarity=0.120 Sum_probs=43.6
Q ss_pred cCceEEEEEEecEEEEEeCCC--ceEEEECCCcEEEEcCCCeEEEEEe---eeEEEEE
Q 037642 12 FDAEETCYLLKGKVKVYPKGS--SDWVEFGAGDLVTIPKGLSCTWDVS---VAVDKYY 64 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g--~e~~~~~~GD~v~~p~g~~~~~~~~---~~~~k~y 64 (74)
.+..|++|||+|++++.++++ .+.+.+++||.++||+|..|.|... ++++.+.
T Consensus 138 h~~~E~~~Vl~G~~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~ 195 (198)
T 2bnm_A 138 HAGNEFLFVLEGEIHMKWGDKENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIA 195 (198)
T ss_dssp CSSCEEEEEEESCEEEEESCTTSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEEEE
T ss_pred CCCeEEEEEEeeeEEEEECCcCCcccEEECCCCEEEeCCCCceEEEecCCCCCeEEEE
Confidence 456899999999999999882 0269999999999999999999987 4554433
No 45
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=98.81 E-value=1.3e-08 Score=61.46 Aligned_cols=52 Identities=21% Similarity=0.342 Sum_probs=42.6
Q ss_pred CceEEEEEEecEEEEE--eCCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEEE
Q 037642 13 DAEETCYLLKGKVKVY--PKGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYKF 66 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~--~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~~ 66 (74)
+..|++|||+|++++. +++ +.+.+++||+++||+|..|.+...+ +++-++++
T Consensus 58 ~~~e~~~vl~G~~~~~~~~~~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~ 113 (145)
T 3ht1_A 58 EWEHEIYVLEGSMGLVLPDQG--RTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVA 113 (145)
T ss_dssp SSCEEEEEEEECEEEEEGGGT--EEEEECTTCEEEECTTCCBEEECCTTCCEEEEEEE
T ss_pred CCceEEEEEEeEEEEEEeECC--EEEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEE
Confidence 4567789999999999 887 5799999999999999999998854 44444444
No 46
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=98.81 E-value=3.3e-08 Score=59.34 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=43.2
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEE
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYK 65 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~ 65 (74)
+..|++||++|++++.+++. .+.+++||+++||+|..+.+...+ +++.+.+
T Consensus 67 ~~~e~~~Vl~G~~~~~i~~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v 119 (126)
T 1vj2_A 67 PWEHEIFVLKGKLTVLKEQG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCL 119 (126)
T ss_dssp SSCEEEEEEESEEEEECSSC--EEEEETTEEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CCcEEEEEEEeEEEEEECCE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 47899999999999999984 699999999999999999998765 4443333
No 47
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.80 E-value=4.9e-08 Score=61.45 Aligned_cols=55 Identities=13% Similarity=0.144 Sum_probs=45.9
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEEEecC
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYKFEST 69 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~~~~~ 69 (74)
+..|++|||+|++++.+++ +.+.+++||+++||+|..|.+...+ +++-++++...
T Consensus 63 ~~~E~~~Vl~G~~~v~v~g--~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~ 119 (156)
T 3kgz_A 63 AHVHAVMIHRGHGQCLVGE--TISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAA 119 (156)
T ss_dssp SSCEEEEEEEEEEEEEETT--EEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESS
T ss_pred CCcEEEEEEeCEEEEEECC--EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCC
Confidence 4689999999999999998 5799999999999999999998744 46555555543
No 48
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.79 E-value=4.8e-08 Score=66.21 Aligned_cols=49 Identities=22% Similarity=0.408 Sum_probs=43.4
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeee
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
++|...+|++|||+|++++.+++ +.+.+++||+++||+|..|.+...+.
T Consensus 62 h~H~~~~e~~~Vl~G~~~~~~~~--~~~~l~~Gd~~~~p~~~~H~~~n~~~ 110 (337)
T 1y3t_A 62 HVHKDTHEGILVLDGKLELTLDG--ERYLLISGDYANIPAGTPHSYRMQSH 110 (337)
T ss_dssp EECTTCCEEEEEEESCEEEEETT--EEEEECTTCEEEECTTCCEEEEECST
T ss_pred eeCCCceEEEEEEECEEEEEECC--EEEEECCCCEEEECCCCcEEEEECCC
Confidence 45544899999999999999987 57999999999999999999998765
No 49
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.78 E-value=4.5e-08 Score=66.39 Aligned_cols=56 Identities=16% Similarity=0.357 Sum_probs=46.3
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeee-EEEEEEE
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA-VDKYYKF 66 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~-~~k~y~~ 66 (74)
++|...+|++|||+|++++.+++ +.+.+++||+++||+|..|.+..... .+.+.++
T Consensus 234 h~H~~~~e~~~vl~G~~~~~i~~--~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~l~v~ 290 (337)
T 1y3t_A 234 HYHEYHTETFYCLEGQMTMWTDG--QEIQLNPGDFLHVPANTVHSYRLDSHYTKMVGVL 290 (337)
T ss_dssp EECSSCEEEEEEEESCEEEEETT--EEEEECTTCEEEECTTCCEEEEECSSSEEEEEEE
T ss_pred cCCCCCcEEEEEEeCEEEEEECC--EEEEECCCCEEEECCCCeEEEEECCCCeEEEEEE
Confidence 45544799999999999999988 57999999999999999999998764 4333333
No 50
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.78 E-value=7.1e-08 Score=66.42 Aligned_cols=65 Identities=18% Similarity=0.386 Sum_probs=49.6
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEe---CCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEEEec
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYP---KGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYKFES 68 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~---~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~~~~ 68 (74)
.||.. ++|.+.+|++|||+|++++++ ++..+.+.+++||+++||+|..|.+...+ +++-+.++..
T Consensus 60 ~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~ 132 (361)
T 2vqa_A 60 EPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFND 132 (361)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESS
T ss_pred cCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECC
Confidence 35543 566658999999999999999 44224689999999999999999999875 5544444443
No 51
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.78 E-value=2.8e-08 Score=66.15 Aligned_cols=56 Identities=13% Similarity=0.046 Sum_probs=48.5
Q ss_pred ecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEec
Q 037642 11 KFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 11 ~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~ 68 (74)
+....|..|||+|++.+.+++ +.+.++|||.++++++.++.|...+.-...|++.+
T Consensus 183 ~h~~ee~~~vLeG~~~~~~~~--~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~k 238 (246)
T 1sfn_A 183 VHYMEHGLLMLEGEGLYKLEE--NYYPVTAGDIIWMGAHCPQWYGALGRNWSKYLLYK 238 (246)
T ss_dssp CCSSCEEEEEEECEEEEEETT--EEEEEETTCEEEECTTCCEEEEEESSSCEEEEEEE
T ss_pred CCCceEEEEEEECEEEEEECC--EEEEcCCCCEEEECCCCCEEEEcCCCCCEEEEEEE
Confidence 345789999999999999998 57999999999999999999998877556777654
No 52
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.76 E-value=7e-08 Score=62.43 Aligned_cols=60 Identities=25% Similarity=0.204 Sum_probs=45.9
Q ss_pred EEecCceEEEEEEecEEEEEeCCC----ce--EEEECCCcEEEEcCCCeEEEEEee--eEEEEEEEec
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGS----SD--WVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYKFES 68 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g----~e--~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~~~~ 68 (74)
++|....|+.|||+|++++.+.++ ++ ...+++||+++||+|..|.+...+ +++.+.++..
T Consensus 88 H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~ 155 (201)
T 1fi2_A 88 HIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNS 155 (201)
T ss_dssp EECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESS
T ss_pred eECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECC
Confidence 445556899999999999988532 24 689999999999999999998653 4555544443
No 53
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.76 E-value=9.7e-08 Score=63.19 Aligned_cols=53 Identities=13% Similarity=-0.048 Sum_probs=46.0
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEe--eeEEEEEEEe
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVS--VAVDKYYKFE 67 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~--~~~~k~y~~~ 67 (74)
+..|++|||+|++++.+++ +.+.+++||+++||+|..|.+... ++++-++++.
T Consensus 165 ~~~e~~~Vl~G~~~~~i~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~ 219 (243)
T 3h7j_A 165 RNEQIGICIGGGYDMTVEG--CTVEMKFGTAYFCEPREDHGAINRSEKESKSINIFF 219 (243)
T ss_dssp SSEEEEEECSSCEEEEETT--EEEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred CCcEEEEEEECEEEEEECC--EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEc
Confidence 4689999999999999999 479999999999999999999987 4566666654
No 54
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.75 E-value=3.4e-08 Score=62.82 Aligned_cols=54 Identities=19% Similarity=0.152 Sum_probs=44.9
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEEEec
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYKFES 68 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~~~~ 68 (74)
+..|++||++|++++.+++ +.+.+++||+++||+|..|.+...+ +++-++++..
T Consensus 72 ~~~E~~~Vl~G~~~~~v~g--~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~ 127 (166)
T 3jzv_A 72 QHAHGVMILKGRGHAMVGR--AVSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNA 127 (166)
T ss_dssp SSCEEEEEEEECEEEEETT--EEEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEES
T ss_pred CCcEEEEEEeCEEEEEECC--EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 4689999999999999998 4799999999999999999998643 4555555543
No 55
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.75 E-value=3.9e-08 Score=61.81 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=48.8
Q ss_pred EEEecCceEEEEEEecEEEEEeCCC------ceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEE
Q 037642 8 FQLKFDAEETCYLLKGKVKVYPKGS------SDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYK 65 (74)
Q Consensus 8 ~~~~~~~~E~~~vleG~~~~~~~~g------~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~ 65 (74)
++.|.+.||+++||+|++++...++ ...+.++||+++++|+|..|.-...+.++-..+
T Consensus 44 ~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~~vLLi 107 (140)
T 3d0j_A 44 LEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKMMYV 107 (140)
T ss_dssp EEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCEEEEE
T ss_pred hccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCceEEEEE
Confidence 4677889999999999999998842 136899999999999999999999888755444
No 56
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=98.75 E-value=7.2e-08 Score=62.11 Aligned_cols=55 Identities=20% Similarity=0.219 Sum_probs=42.9
Q ss_pred CceEEEEEEecEEEEEeCCCc-e--EEEECCCcEEEEcCCCeEEEEEee--eEEEEEEEe
Q 037642 13 DAEETCYLLKGKVKVYPKGSS-D--WVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYKFE 67 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~-e--~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~~~ 67 (74)
+..|++|||+|++.+.+++.. + .+.+++||+++||+|..|.+...+ +++-+.++.
T Consensus 95 ~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~ 154 (190)
T 1x82_A 95 DRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYP 154 (190)
T ss_dssp TCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEE
T ss_pred CCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEEC
Confidence 347999999999999998841 0 289999999999999999998754 454333333
No 57
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.75 E-value=6.5e-08 Score=64.36 Aligned_cols=51 Identities=18% Similarity=0.167 Sum_probs=44.5
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEE
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKF 66 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~ 66 (74)
.+|++|||+|++++.+++ +.+.|++||.++||+|..|.+...++.+-+++.
T Consensus 68 ~ee~~~Vl~G~~~~~~~~--~~~~l~~Gd~~~~p~~~~H~~~n~~~~~~l~v~ 118 (246)
T 1sfn_A 68 YQRFAFVLSGEVDVAVGG--ETRTLREYDYVYLPAGEKHMLTAKTDARVSVFE 118 (246)
T ss_dssp SEEEEEEEEEEEEEECSS--CEEEECTTEEEEECTTCCCEEEEEEEEEEEEEE
T ss_pred eeEEEEEEECEEEEEECC--EEEEECCCCEEEECCCCCEEEEeCCCEEEEEEE
Confidence 789999999999999998 479999999999999999999988766544443
No 58
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.73 E-value=5.8e-08 Score=65.87 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=45.1
Q ss_pred cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEe--eeEEEEEEE
Q 037642 12 FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVS--VAVDKYYKF 66 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~--~~~~k~y~~ 66 (74)
...+|++|||+|++++.+++ +.+.+++||.++||+|..|.+... ++++.+.+.
T Consensus 88 H~~eE~~~Vl~G~l~v~v~g--~~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~ 142 (278)
T 1sq4_A 88 PNAEAVLFVVEGELSLTLQG--QVHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIR 142 (278)
T ss_dssp TTEEEEEEEEESCEEEEESS--CEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEE
T ss_pred CCceEEEEEEeCEEEEEECC--EEEEECCCCEEEECCCCcEEEEECCCCCEEEEEEE
Confidence 45799999999999999998 479999999999999999999976 455544444
No 59
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.72 E-value=7.3e-08 Score=64.29 Aligned_cols=52 Identities=15% Similarity=0.253 Sum_probs=44.1
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEe--eeEEEEEEE
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVS--VAVDKYYKF 66 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~--~~~~k~y~~ 66 (74)
..+|+.|||+|++++.+++ +.+.|++||.++||+|..|.+... ++++-+.+.
T Consensus 80 ~~ee~~~Vl~G~l~~~~~~--~~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~ 133 (261)
T 1rc6_A 80 GIETFLYVISGNITAKAEG--KTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYK 133 (261)
T ss_dssp TEEEEEEEEESEEEEEETT--EEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CceEEEEEEEeEEEEEECC--EEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 3579999999999999988 579999999999999999999987 455444444
No 60
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.71 E-value=2.1e-07 Score=56.57 Aligned_cols=53 Identities=13% Similarity=0.167 Sum_probs=44.5
Q ss_pred cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee---eEEEEEEE
Q 037642 12 FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV---AVDKYYKF 66 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~---~~~k~y~~ 66 (74)
.+..|++||++|++++.+++ +.+.+++||+++||+|..|.+.... +.+..++.
T Consensus 36 h~~~~i~~v~~G~~~~~i~~--~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~ 91 (164)
T 2arc_A 36 MKGYILNLTIRGQGVVKNQG--REFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVY 91 (164)
T ss_dssp CSSEEEEEEEEECEEEEETT--EEEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEE
T ss_pred CCceEEEEEEEeEEEEEECC--EEEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEE
Confidence 46789999999999999998 4799999999999999999998753 35444443
No 61
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.71 E-value=6.6e-08 Score=65.05 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=41.4
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeee
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
..+|+.|||+|++++.+++ +.+.+++||+++||+|..|.+...+.
T Consensus 202 ~~~E~~yVl~G~~~~~i~~--~~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 202 VQEHGAYLISGQGMYNLDN--EWYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp SCCEEEEEEECEEEEEETT--EEEEEETTCEEEECTTCCEEEEEECS
T ss_pred cCeEEEEEEeCEEEEEECC--EEEEECCCCEEEECCCCCEEEEeCCC
Confidence 5689999999999999998 57999999999999999999998755
No 62
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.69 E-value=1.1e-07 Score=61.70 Aligned_cols=63 Identities=16% Similarity=0.153 Sum_probs=47.9
Q ss_pred EEEe-cCceEEEEEEecEEEEEeCCC--ceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecCC
Q 037642 8 FQLK-FDAEETCYLLKGKVKVYPKGS--SDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESTS 70 (74)
Q Consensus 8 ~~~~-~~~~E~~~vleG~~~~~~~~g--~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~~ 70 (74)
+.|| .+.+|++|+|+|++.|.+.++ ...+.+++||++++|+|..|.-.-.++=-..|++....
T Consensus 48 ~d~H~h~~dE~FyvlkG~m~i~v~d~g~~~~v~l~eGE~f~lP~gvpH~P~r~~~e~~~lviE~~r 113 (174)
T 1yfu_A 48 TDYHDDPLEEFFYQLRGNAYLNLWVDGRRERADLKEGDIFLLPPHVRHSPQRPEAGSACLVIERQR 113 (174)
T ss_dssp CCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEEBCCTTCEEEEEEECC
T ss_pred ccCcCCCCceEEEEEeeEEEEEEEcCCceeeEEECCCCEEEeCCCCCcCccccCCCCEEEEEEeCC
Confidence 3444 368999999999999998763 13699999999999999999886555223566665543
No 63
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.68 E-value=4.9e-08 Score=62.88 Aligned_cols=53 Identities=9% Similarity=0.263 Sum_probs=43.9
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEEEe
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYKFE 67 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~~~ 67 (74)
...|+.|||+|++++.++++ +.+.|++||.+ ||+|..|.|.... +++.++++.
T Consensus 98 ~~eE~~~VLeGel~l~ld~g-e~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~ 152 (172)
T 3es1_A 98 NSIDYGIVLEGEIELELDDG-AKRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILI 152 (172)
T ss_dssp SEEEEEEEEESCEEEECGGG-CEEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEE
T ss_pred CceEEEEEEeCEEEEEECCC-eEEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEc
Confidence 45789999999999999855 57999999999 9999999998764 565555544
No 64
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.68 E-value=2.9e-07 Score=66.46 Aligned_cols=65 Identities=14% Similarity=0.132 Sum_probs=50.3
Q ss_pred CCceE--EEecCceEEEEEEecEEEEEe--CCCceEEEECCCcEEEEcCCCeEEEEEee---eEEEEEEEec
Q 037642 4 SPGKF--QLKFDAEETCYLLKGKVKVYP--KGSSDWVEFGAGDLVTIPKGLSCTWDVSV---AVDKYYKFES 68 (74)
Q Consensus 4 ~pg~~--~~~~~~~E~~~vleG~~~~~~--~~g~e~~~~~~GD~v~~p~g~~~~~~~~~---~~~k~y~~~~ 68 (74)
+||.. ..|.+.+|+.|||+|++++.+ .++.+...+++||+++||+|..|.+.-.+ +++-+.++..
T Consensus 94 ~Pgg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~ 165 (445)
T 2cav_A 94 KPNTLLLPHHSDSDLLVLVLEGQAILVLVNPDGRDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAIT 165 (445)
T ss_dssp CSSEEEEEEEESSEEEEEEEESEEEEEEEETTEEEEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEEC
T ss_pred CCCcCccCcCCCCceEEEEEeCEEEEEEEeCCCCEEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEecc
Confidence 56764 236778999999999999986 33336899999999999999999999864 5555544553
No 65
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.68 E-value=2.3e-07 Score=66.74 Aligned_cols=64 Identities=17% Similarity=0.096 Sum_probs=49.5
Q ss_pred CCceE--EEecCceEEEEEEecEEEEEe--CCCceEEEECCCcEEEEcCCCeEEEEEee---eEEEEEEEe
Q 037642 4 SPGKF--QLKFDAEETCYLLKGKVKVYP--KGSSDWVEFGAGDLVTIPKGLSCTWDVSV---AVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~--~~~~~~~E~~~vleG~~~~~~--~~g~e~~~~~~GD~v~~p~g~~~~~~~~~---~~~k~y~~~ 67 (74)
+||.. ..|.+.+|++|||+|++++.+ +++.+...+++||+++||+|..|.+.-.+ +++.+.++.
T Consensus 69 ~PGg~~~pHh~~a~Ei~yVl~G~g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~ 139 (434)
T 2ea7_A 69 KPNTLLLPHHADADFLLVVLNGTAVLTLVNPDSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAI 139 (434)
T ss_dssp CTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEE
T ss_pred cCCcCccCccCCCceEEEEEecEEEEEEEeCCCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEec
Confidence 46765 236778999999999999987 33236799999999999999999998764 454444444
No 66
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.66 E-value=1.1e-07 Score=58.72 Aligned_cols=45 Identities=18% Similarity=0.175 Sum_probs=40.6
Q ss_pred CceEEEEEEecEEEEEeCCCceE-EEECCCcEEEEcCCCeEEEEEeee
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDW-VEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~-~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
+..|++||++|++++.+++. . +.+++||+++||+|..+.+.....
T Consensus 67 ~~~E~~~Vl~G~~~~~~~~~--~~~~l~~Gd~i~ip~~~~H~~~n~~~ 112 (147)
T 2f4p_A 67 PGGQILIVTRGKGFYQERGK--PARILKKGDVVEIPPNVVHWHGAAPD 112 (147)
T ss_dssp TTCEEEEEEEEEEEEEETTS--CCEEEETTCEEEECTTCCEEEEEBTT
T ss_pred CCceEEEEEeCEEEEEECCE--EEEEECCCCEEEECCCCcEEeEeCCC
Confidence 45899999999999999984 5 899999999999999999998654
No 67
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.66 E-value=1.1e-07 Score=63.99 Aligned_cols=52 Identities=12% Similarity=0.200 Sum_probs=43.8
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee--eEEEEEEE
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYKF 66 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~~ 66 (74)
..+|+.|||+|++++.+++ +.+.|++||.++||++..+.+.... +++-+.++
T Consensus 83 ~~ee~~~Vl~G~l~~~~~~--~~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v~ 136 (274)
T 1sef_A 83 GIQTLVYVIDGRLRVSDGQ--ETHELEAGGYAYFTPEMKMYLANAQEADTEVFLYK 136 (274)
T ss_dssp TEEEEEEEEESEEEEECSS--CEEEEETTEEEEECTTSCCEEEESSSSCEEEEEEE
T ss_pred CceEEEEEEEeEEEEEECC--EEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEE
Confidence 3579999999999999988 4799999999999999999999874 45444443
No 68
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.65 E-value=8.8e-08 Score=65.38 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=44.4
Q ss_pred cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEE
Q 037642 12 FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYK 65 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~ 65 (74)
...+|++|||+|++++.++++ +++.+++||.++||+|..|+|+-.++.+-+++
T Consensus 88 h~~EEfiyVleG~l~l~l~~g-~~~~L~~Gds~y~p~~~~H~~~N~~~Ar~l~V 140 (266)
T 4e2q_A 88 QDIERLIFVVEGAVTLTNTSS-SSKKLTVDSYAYLPPNFHHSLDCVESATLVVF 140 (266)
T ss_dssp TTEEEEEEEEEECEEEEC--C-CCEEECTTEEEEECTTCCCEEEESSCEEEEEE
T ss_pred CCCeEEEEEEEEEEEEEECCC-cEEEEcCCCEEEECCCCCEEEEeCCCEEEEEE
Confidence 456999999999999999933 47999999999999999999998877655554
No 69
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.65 E-value=9e-08 Score=66.69 Aligned_cols=62 Identities=13% Similarity=0.236 Sum_probs=48.5
Q ss_pred EEEecCceEEEEEEecEEEEEeCCC---ceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecC
Q 037642 8 FQLKFDAEETCYLLKGKVKVYPKGS---SDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFEST 69 (74)
Q Consensus 8 ~~~~~~~~E~~~vleG~~~~~~~~g---~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~ 69 (74)
.++|...+|++|||+|++++.++++ .+.+.+++||+++||+|..|.+.....-.++.++..+
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~~~l~v~~p 129 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVP 129 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTEEEEEEEES
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCCEEEEEEcC
Confidence 4566668999999999999999871 1369999999999999999999986542244444433
No 70
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.65 E-value=3.1e-07 Score=65.65 Aligned_cols=63 Identities=17% Similarity=0.218 Sum_probs=49.5
Q ss_pred CCceE--EEecCceEEEEEEecEEEEEe---CCCceEEEECCCcEEEEcCCCeEEEEEe---eeEEEEEEEe
Q 037642 4 SPGKF--QLKFDAEETCYLLKGKVKVYP---KGSSDWVEFGAGDLVTIPKGLSCTWDVS---VAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~--~~~~~~~E~~~vleG~~~~~~---~~g~e~~~~~~GD~v~~p~g~~~~~~~~---~~~~k~y~~~ 67 (74)
+||.. ..|.+.+|++|||+|++++.+ +++ ++..+++||+++||+|..|.+.-. ++++.+.++.
T Consensus 57 ~PGg~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~ 127 (416)
T 1uij_A 57 KPNTILLPHHADADFLLFVLSGRAILTLVNNDDR-DSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAI 127 (416)
T ss_dssp CTTEEEEEEEESEEEEEEEEESCEEEEEECSSCE-EEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEE
T ss_pred ccCcCcccccCCCceEEEEEeeEEEEEEEECCCC-eEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEec
Confidence 57664 236788999999999999987 233 689999999999999999999876 3555444554
No 71
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.63 E-value=1.8e-07 Score=61.20 Aligned_cols=50 Identities=22% Similarity=0.426 Sum_probs=41.5
Q ss_pred EEecCceEEEEEEecEEEEEeCCC-ce--EEEECCCcEEEEcCCCeEEEEEeee
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGS-SD--WVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g-~e--~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
+.| +.+|+.||++|++.+.++++ .+ .+.+++||+++||+|..|.+...+.
T Consensus 100 H~H-~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~ 152 (191)
T 1vr3_A 100 HLH-LDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEK 152 (191)
T ss_dssp EEC-SSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTT
T ss_pred eEC-CcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCC
Confidence 444 46899999999999999873 13 3589999999999999999987655
No 72
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.63 E-value=4.2e-08 Score=65.80 Aligned_cols=50 Identities=8% Similarity=0.115 Sum_probs=43.7
Q ss_pred EEEecCceEEEEEEecEEEEEe--------CCCce------------EEEECCCcEEEEcCCCeEEEEEeee
Q 037642 8 FQLKFDAEETCYLLKGKVKVYP--------KGSSD------------WVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 8 ~~~~~~~~E~~~vleG~~~~~~--------~~g~e------------~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
.++|...+|++|||+|++++.+ ++ + .+.++|||+++||+|..|.|.....
T Consensus 58 ~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~ 127 (239)
T 2xlg_A 58 PHIHYFINEWFWTPEGGIELFHSTKQYPNMDE--LPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTD 127 (239)
T ss_dssp SEEESSEEEEEEETTCCCEEEEEEEECCCTTS--CCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSS
T ss_pred CeECCCccEEEEEEEeEEEEEEEecccccCCC--cccccccccCceeEEEECCCCEEEECCCCCEEEEeCCC
Confidence 3667778999999999999999 55 4 7899999999999999999997654
No 73
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.63 E-value=5.3e-08 Score=63.19 Aligned_cols=64 Identities=14% Similarity=0.079 Sum_probs=48.5
Q ss_pred CCce-EEEec-CceEEEEEEecEEEEEeCCCc------eEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEec
Q 037642 4 SPGK-FQLKF-DAEETCYLLKGKVKVYPKGSS------DWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 4 ~pg~-~~~~~-~~~E~~~vleG~~~~~~~~g~------e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~ 68 (74)
.|+. +.||. +.+|++|+|+|++.|.+.+.+ ..+.+++||++++|+|..|.=.-.+.. ..|++..
T Consensus 42 GPn~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e~-v~lviEr 113 (176)
T 1zvf_A 42 GPNERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFADT-VGIVVEQ 113 (176)
T ss_dssp SSBCCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECTTC-EEEEEEE
T ss_pred CCCcCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccCCc-EEEEEEe
Confidence 4656 56664 579999999999999987722 369999999999999999987444433 4555543
No 74
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.62 E-value=1.6e-07 Score=64.11 Aligned_cols=55 Identities=15% Similarity=0.157 Sum_probs=49.1
Q ss_pred cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEec
Q 037642 12 FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~ 68 (74)
....|..|||+|++.+.+++ +.+.+++||.++++++..+.....++-...|++++
T Consensus 205 H~~eh~~~vL~G~g~y~l~~--~~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~yk 259 (266)
T 4e2q_A 205 HYNQHGLLLLEGQGIYRLGD--NWYPVQAGDVIWMAPFVPQWYAALGKTRSRYLLYK 259 (266)
T ss_dssp CSCCEEEEEEECEEEEEETT--EEEEEETTCEEEECTTCCEEEEEESSSCEEEEEEE
T ss_pred cccceEEEEEeceEEEEECC--EEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEc
Confidence 45679999999999999999 58999999999999999999999877677787765
No 75
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.59 E-value=3.7e-07 Score=60.37 Aligned_cols=54 Identities=7% Similarity=-0.006 Sum_probs=45.0
Q ss_pred CCceE-EEe-cCceEEEEEEecEEEEEeCCCceEEEECCCcEEE-EcCCCeEEEEEeee
Q 037642 4 SPGKF-QLK-FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVT-IPKGLSCTWDVSVA 59 (74)
Q Consensus 4 ~pg~~-~~~-~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~-~p~g~~~~~~~~~~ 59 (74)
.||.. ..| .+..|+.|||+|++++.+++ +...+.|||.++ ||+|..|.+...+.
T Consensus 42 ~pg~~~~~H~H~~~e~~~Vl~G~~~~~~~~--~~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 42 PPHTNVEPHQHKEVQIGMVVSGELMMTVGD--VTRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp CTTEEEEEECCSSEEEEEEEESEEEEEETT--EEEEEETTTCEEEECTTCCEEEEECSS
T ss_pred CCCCccCCEECCCcEEEEEEEeEEEEEECC--EEEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 46653 333 35799999999999999987 479999999995 99999999998765
No 76
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.57 E-value=8.6e-07 Score=61.62 Aligned_cols=54 Identities=24% Similarity=0.377 Sum_probs=43.3
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeC--CCce--EEEECCCcEEEEcCCCeEEEEEeee
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPK--GSSD--WVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~--~g~e--~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
.||.. ++|. ..|++|||+|++++.+. +| + .+.+++||+++||+|..|.+...+.
T Consensus 87 ~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g-~~~~~~l~~GD~~~ip~g~~H~~~n~~~ 147 (385)
T 1j58_A 87 KPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKG-RSFIDDVGEGDLWYFPSGLPHSIQALEE 147 (385)
T ss_dssp CTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTS-CEEEEEEETTEEEEECTTCCEEEEEEEE
T ss_pred CCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCC-cEEEEEeCCCCEEEECCCCeEEEEECCC
Confidence 45543 4555 88999999999999983 22 4 4599999999999999999987654
No 77
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.57 E-value=7.2e-07 Score=65.84 Aligned_cols=65 Identities=15% Similarity=0.298 Sum_probs=47.5
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCC--Cce--EEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEec
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKG--SSD--WVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~--g~e--~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~ 68 (74)
+||.. +||..+.|+.|||+|++.+.+-+ |+. ...|++||+++||+|..|.-...+.-..+..|..
T Consensus 402 ~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag~e~l~flaF~s 473 (531)
T 3fz3_A 402 YRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAGNQGFEYFAFKT 473 (531)
T ss_dssp CTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEES
T ss_pred ecCccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecCCCCEEEEEEec
Confidence 45654 67888999999999999988744 222 3679999999999999996554434334434544
No 78
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.55 E-value=9.1e-07 Score=64.64 Aligned_cols=61 Identities=18% Similarity=0.277 Sum_probs=45.6
Q ss_pred EEEecCceEEEEEEecEEEEEeCCC--ceE--EEECCCcEEEEcCCCeEEEEEeeeEEEEEEEec
Q 037642 8 FQLKFDAEETCYLLKGKVKVYPKGS--SDW--VEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 8 ~~~~~~~~E~~~vleG~~~~~~~~g--~e~--~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~ 68 (74)
.++|...+|++|||+|++++.+.+. ... ..|++||+++||+|..|.....+.-.++..+..
T Consensus 382 pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~e~~~~l~~~t 446 (493)
T 2d5f_A 382 PHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFKT 446 (493)
T ss_dssp EEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEES
T ss_pred eeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCCCCEEEEEEEC
Confidence 3677778999999999999987652 233 349999999999999999776554334444443
No 79
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.55 E-value=7.2e-07 Score=65.52 Aligned_cols=66 Identities=14% Similarity=0.289 Sum_probs=48.4
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCC--CceEEE--ECCCcEEEEcCCCeEEEEEeeeEEEEEEEecC
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKG--SSDWVE--FGAGDLVTIPKGLSCTWDVSVAVDKYYKFEST 69 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~--g~e~~~--~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~ 69 (74)
.||.. ++|....|++|||+|++++.+.+ |+..+. |++||+++||+|..|.....+.-..+..+..+
T Consensus 380 ~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~Ng~e~l~~l~f~~s 452 (510)
T 3c3v_A 380 YRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKSQSDNFEYVAFKTD 452 (510)
T ss_dssp ETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEEEEEEESS
T ss_pred cCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEeCCCCEEEEEEECC
Confidence 35553 67777899999999999998754 223444 99999999999999998875443344445433
No 80
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.55 E-value=4.7e-07 Score=62.29 Aligned_cols=50 Identities=24% Similarity=0.378 Sum_probs=41.4
Q ss_pred EEecCceEEEEEEecEEEEEe---CCCceEEEECCCcEEEEcCCCeEEEEEee
Q 037642 9 QLKFDAEETCYLLKGKVKVYP---KGSSDWVEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~---~~g~e~~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
++|....|++|||+|++++.+ ++....+.+++||+++||+|..|.+...+
T Consensus 250 H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~ 302 (361)
T 2vqa_A 250 HWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSS 302 (361)
T ss_dssp EECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCS
T ss_pred ccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECC
Confidence 555556999999999999998 44112799999999999999999998754
No 81
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.55 E-value=6.6e-07 Score=65.11 Aligned_cols=64 Identities=13% Similarity=0.284 Sum_probs=47.4
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCC--CceEEE--ECCCcEEEEcCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKG--SSDWVE--FGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~--g~e~~~--~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
+||.. ++|....|+.|||+|++++.+.+ |...+. +++||+++||+|..|.....+.-..+..+.
T Consensus 346 ~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng~~~l~~l~f~ 416 (476)
T 1fxz_A 346 RKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFK 416 (476)
T ss_dssp CTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSTTEEEEEEE
T ss_pred cCCceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeCCCCEEEEEEE
Confidence 45553 67777899999999999998754 223444 999999999999999988744333333344
No 82
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.54 E-value=4.8e-08 Score=57.36 Aligned_cols=64 Identities=8% Similarity=0.093 Sum_probs=46.2
Q ss_pred CcCCceE---EEecCceEEEEEEecEEEEEeCCCc-eEEEECCCcEEEEcCCCeEEEEEeeeEEEEEE
Q 037642 2 GCSPGKF---QLKFDAEETCYLLKGKVKVYPKGSS-DWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYK 65 (74)
Q Consensus 2 ~~~pg~~---~~~~~~~E~~~vleG~~~~~~~~g~-e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~ 65 (74)
.-+||.. +.|....+++++++|.+++..++|. ....++|||++++|+|..|...-.+.-...|+
T Consensus 23 ~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi 90 (98)
T 2ozi_A 23 RLPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFL 90 (98)
T ss_dssp EECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEE
T ss_pred EECCCCccCcEeCCCCEEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEE
Confidence 3467774 4444455666778999999998873 24789999999999999999987665434443
No 83
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.50 E-value=5.6e-07 Score=62.57 Aligned_cols=50 Identities=16% Similarity=0.202 Sum_probs=41.5
Q ss_pred EEecCceEEEEEEecEEEEEeC--CC-ceEEEECCCcEEEEcCCCeEEEEEee
Q 037642 9 QLKFDAEETCYLLKGKVKVYPK--GS-SDWVEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~--~g-~e~~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
++|...+|++|||+|+++++++ +| .+.+.+++||+++||+|..|.+...+
T Consensus 273 h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~ 325 (385)
T 1j58_A 273 HWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIG 325 (385)
T ss_dssp EECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECS
T ss_pred eeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECC
Confidence 4555558999999999999986 22 15799999999999999999998754
No 84
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.48 E-value=1.9e-06 Score=62.48 Aligned_cols=54 Identities=13% Similarity=0.275 Sum_probs=43.9
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCC--CceEEE--ECCCcEEEEcCCCeEEEEEe
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKG--SSDWVE--FGAGDLVTIPKGLSCTWDVS 57 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~--g~e~~~--~~~GD~v~~p~g~~~~~~~~ 57 (74)
.||.. +||....|+.||++|++.+.+.+ |...+. |++||+++||+|..|.-.-.
T Consensus 330 ~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~~ng 390 (459)
T 2e9q_A 330 YSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRAS 390 (459)
T ss_dssp CTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE
T ss_pred eCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEEEEEeC
Confidence 45654 67888999999999999999865 334554 99999999999999987664
No 85
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.47 E-value=3.3e-07 Score=62.12 Aligned_cols=52 Identities=25% Similarity=0.241 Sum_probs=43.6
Q ss_pred cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEE
Q 037642 12 FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYK 65 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~ 65 (74)
....|.+|||+|++.+.+++ +.+.++|||++++++|..+.+...+.-...|+
T Consensus 210 h~~e~~~~il~G~~~~~~~~--~~~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl 261 (278)
T 1sq4_A 210 HVMEHGLYVLEGKAVYRLNQ--DWVEVEAGDFMWLRAFCPQACYSGGPGRFRYL 261 (278)
T ss_dssp CSEEEEEEEEECEEEEEETT--EEEEEETTCEEEEEESCCEEEECCSSSCEEEE
T ss_pred CCccEEEEEEeCEEEEEECC--EEEEeCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 34679999999999999998 57999999999999999999998654333443
No 86
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.45 E-value=1.1e-06 Score=61.43 Aligned_cols=49 Identities=14% Similarity=0.225 Sum_probs=41.9
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeE
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAV 60 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~ 60 (74)
++|... |++||++|++++++++ +++.+++||++++|++..+.....+++
T Consensus 284 H~h~~~-ev~~v~~G~g~~~v~~--~~~~~~~GD~~~vP~~~~H~~~n~e~~ 332 (354)
T 2d40_A 284 ARTTDS-TIYHVVEGSGQVIIGN--ETFSFSAKDIFVVPTWHGVSFQTTQDS 332 (354)
T ss_dssp BEESSC-EEEEEEEEEEEEEETT--EEEEEETTCEEEECTTCCEEEEEEEEE
T ss_pred eecCCc-EEEEEEeCeEEEEECC--EEEEEcCCCEEEECCCCeEEEEeCCCE
Confidence 344444 9999999999999976 689999999999999999999876664
No 87
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.44 E-value=5.1e-07 Score=63.12 Aligned_cols=52 Identities=15% Similarity=0.272 Sum_probs=43.1
Q ss_pred CCceE---EEecCceEEEEEEecEEEE-EeCCCceEEEECCCcEEEEcCCCeEEEEEee
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKV-YPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~-~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
.||.. +.| +..|++|||+|++.+ .+++ +.+.+++||+++||+|..|.+...+
T Consensus 108 ~PG~~~~~H~H-~~~e~~yVl~G~g~~t~v~g--~~~~l~~GD~~~iP~g~~H~~~n~~ 163 (354)
T 2d40_A 108 MPGEVAPSHRH-NQSALRFIVEGKGAFTAVDG--ERTPMNEGDFILTPQWRWHDHGNPG 163 (354)
T ss_dssp CTTCEEEEEEE-SSCEEEEEEECSSCEEEETT--EEEECCTTCEEEECTTSCEEEECCS
T ss_pred CCCCCcCCeec-CcceEEEEEEEEEEEEEECC--EEEEEcCCCEEEECCCCcEEeEeCC
Confidence 45553 344 567999999999998 6776 5799999999999999999998764
No 88
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.42 E-value=2.5e-06 Score=60.92 Aligned_cols=57 Identities=18% Similarity=0.193 Sum_probs=46.9
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCCC--------c--eEEEECCCcEEEEcCCCeEEEEEeeeE
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKGS--------S--DWVEFGAGDLVTIPKGLSCTWDVSVAV 60 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~g--------~--e~~~~~~GD~v~~p~g~~~~~~~~~~~ 60 (74)
+||.. +||....|+.||++|++.+.+-+. . -...+++||+++||+|..+...-.+.+
T Consensus 247 ~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~~l 316 (397)
T 2phl_A 247 EEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATSNV 316 (397)
T ss_dssp CTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESSSE
T ss_pred cCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCCCe
Confidence 46665 678889999999999999998642 1 146799999999999999999888764
No 89
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.39 E-value=1.9e-07 Score=60.46 Aligned_cols=49 Identities=16% Similarity=0.311 Sum_probs=39.5
Q ss_pred EEecCceEEEEEEecEEEEEeC-CCceE--EEECCCcEEEEcCCCeEEEEEeee
Q 037642 9 QLKFDAEETCYLLKGKVKVYPK-GSSDW--VEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~-~g~e~--~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
+.| +.+|+.||++|++.+.+. ++ +. +.+++||+++||+|..|.+...+.
T Consensus 96 H~H-~~~Ei~~Vl~G~g~~~i~~~d-~~~~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 96 HTH-GEDEVRFFVEGAGLFCLHIGD-EVFQVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp BEE-SSCEEEEEEESCCCCCEECSS-CEEEEECCCSCEEEECTTCCBCCCCSSC
T ss_pred eEC-ChheEEEEEcceEEEEEEeCC-EEEEEEECCCCEEEECCCCeEeeecCCC
Confidence 444 458999999999999873 33 34 559999999999999999887554
No 90
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.38 E-value=1.1e-07 Score=55.55 Aligned_cols=57 Identities=9% Similarity=0.103 Sum_probs=44.6
Q ss_pred cCCce---EEEecCceEEEEEEecEEEEEeCCCce-EEEECCCcEEEEcCCCeEEEEEeee
Q 037642 3 CSPGK---FQLKFDAEETCYLLKGKVKVYPKGSSD-WVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 3 ~~pg~---~~~~~~~~E~~~vleG~~~~~~~~g~e-~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
-+||. ++.|....|+++|++|.++++.+++.. ...+++||.+++|+|..|...-.+.
T Consensus 24 i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 24 LPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp ECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEBCCSS
T ss_pred ECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcEECEECCC
Confidence 35776 456666789999999999999988632 3568999999999999999876554
No 91
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.36 E-value=4.4e-06 Score=61.23 Aligned_cols=55 Identities=18% Similarity=0.330 Sum_probs=42.8
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCC--CceEE--EECCCcEEEEcCCCeEEEEEee
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKG--SSDWV--EFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~--g~e~~--~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
.||.. +||..+.|+.||++|++.+.+-+ |+..+ .|++||+++||+|..|.-....
T Consensus 366 ~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~a~~ 427 (496)
T 3ksc_A 366 HKNAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSLS 427 (496)
T ss_dssp ETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECS
T ss_pred eCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEEEEeCC
Confidence 35554 68888999999999999998744 33344 4999999999999999654443
No 92
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.35 E-value=6e-06 Score=60.12 Aligned_cols=55 Identities=20% Similarity=0.348 Sum_probs=43.2
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCC--CceEE--EECCCcEEEEcCCCeEEEEEee
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKG--SSDWV--EFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~--g~e~~--~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
+||.. +||..+.|+.||++|++.+.+-+ |+..+ .|++||+++||+|..|.-....
T Consensus 331 ~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~ag~ 392 (466)
T 3kgl_A 331 RQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRATS 392 (466)
T ss_dssp ETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECS
T ss_pred ecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEEEEcCC
Confidence 45664 68888999999999999998744 32333 4999999999999999775543
No 93
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.35 E-value=3.1e-06 Score=60.45 Aligned_cols=43 Identities=12% Similarity=0.088 Sum_probs=38.8
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
..+++|||+|++.+.+++ +.+.+++||+|++|+|..|...-.+
T Consensus 314 ~~~v~~VleG~G~~~V~g--e~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 314 GNVIYNVAKGQGYSIVGG--KRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp SCEEEEEEECCEEEEETT--EEEEECTTCEEEECTTCCEEEEECC
T ss_pred CcEEEEEEeCeEEEEECC--EEEEEeCCCEEEECCCCeEEeEeCC
Confidence 568999999999999987 5799999999999999999998653
No 94
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.35 E-value=5.5e-06 Score=60.05 Aligned_cols=66 Identities=17% Similarity=0.164 Sum_probs=49.9
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeC--CCc----------------------eEEEECCCcEEEEcCCCeEEEEE
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPK--GSS----------------------DWVEFGAGDLVTIPKGLSCTWDV 56 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~--~g~----------------------e~~~~~~GD~v~~p~g~~~~~~~ 56 (74)
+||.. ++ .+.+|++||++|++.+.+. ++. +...|++||+++||+|..|.+.-
T Consensus 71 ~pggl~~Ph~-h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N 149 (459)
T 2e9q_A 71 RPKGLLLPGF-SNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRPFREGDLLVVPAGVSHWMYN 149 (459)
T ss_dssp CTTEEEEEEE-ESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEEEETTEEEEECTTCCEEEEE
T ss_pred cCCCEeccee-cCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEEecCCCEEEECCCCCEEEEe
Confidence 56765 34 3689999999999999875 211 14589999999999999999987
Q ss_pred ee--eEEEEEEEecCC
Q 037642 57 SV--AVDKYYKFESTS 70 (74)
Q Consensus 57 ~~--~~~k~y~~~~~~ 70 (74)
.+ +++.+.+++..+
T Consensus 150 ~g~~~l~~l~~~d~~n 165 (459)
T 2e9q_A 150 RGQSDLVLIVFADTRN 165 (459)
T ss_dssp CSSSCEEEEEEEESSS
T ss_pred CCCCCEEEEEEecCCC
Confidence 65 565555666543
No 95
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.35 E-value=3.9e-06 Score=59.97 Aligned_cols=59 Identities=14% Similarity=0.217 Sum_probs=47.2
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCCCc---------------eEE--EECCCcEEEEcCCCeEEEEEeeeEEE
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKGSS---------------DWV--EFGAGDLVTIPKGLSCTWDVSVAVDK 62 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~g~---------------e~~--~~~~GD~v~~p~g~~~~~~~~~~~~k 62 (74)
.||.. +||....|+.||++|++.+.+-+.. ..+ .+++||+++||+|..+...-.+++.-
T Consensus 257 ~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~~~~~~ 335 (416)
T 1uij_A 257 NEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNF 335 (416)
T ss_dssp CTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEESSSEEE
T ss_pred cCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcCCCeEE
Confidence 46664 6788899999999999999864321 145 89999999999999999988876543
No 96
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.32 E-value=6.3e-06 Score=59.95 Aligned_cols=67 Identities=16% Similarity=0.192 Sum_probs=50.5
Q ss_pred CCceEE--EecCceEEEEEEecEEEEEeCC--Cc-----------------------eEEEECCCcEEEEcCCCeEEEEE
Q 037642 4 SPGKFQ--LKFDAEETCYLLKGKVKVYPKG--SS-----------------------DWVEFGAGDLVTIPKGLSCTWDV 56 (74)
Q Consensus 4 ~pg~~~--~~~~~~E~~~vleG~~~~~~~~--g~-----------------------e~~~~~~GD~v~~p~g~~~~~~~ 56 (74)
+||... .+.+.+|++||++|++.+.+.. +. +...|++||+++||+|..|.+.-
T Consensus 56 ~Pggl~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N 135 (476)
T 1fxz_A 56 NRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYN 135 (476)
T ss_dssp CTTEEEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEEEECTTEEEEECTTCEEEEEE
T ss_pred cCCCEecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEEEEeCCCEEEECCCCcEEEEe
Confidence 566652 3356899999999999888753 10 25789999999999999999987
Q ss_pred ee--eEEEEEEEecCC
Q 037642 57 SV--AVDKYYKFESTS 70 (74)
Q Consensus 57 ~~--~~~k~y~~~~~~ 70 (74)
.+ +++.+.+++...
T Consensus 136 ~G~~~l~~i~~~d~~n 151 (476)
T 1fxz_A 136 NEDTPVVAVSIIDTNS 151 (476)
T ss_dssp CSSSCEEEEEEECTTC
T ss_pred CCCCCEEEEEEecCCC
Confidence 76 566666666444
No 97
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.31 E-value=1.1e-05 Score=58.65 Aligned_cols=54 Identities=13% Similarity=0.319 Sum_probs=42.1
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCC--CceEEE--ECCCcEEEEcCCCeEEEEEe
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKG--SSDWVE--FGAGDLVTIPKGLSCTWDVS 57 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~--g~e~~~--~~~GD~v~~p~g~~~~~~~~ 57 (74)
.||.. +||..+.|+.||++|++.+.+-+ |+..+. |++||+++||+|..+.-...
T Consensus 331 ~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~h~~~ag 391 (465)
T 3qac_A 331 YRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFAIVKQAF 391 (465)
T ss_dssp CTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE
T ss_pred cCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcEEEEEcC
Confidence 45554 68888999999999999988744 223444 99999999999999865543
No 98
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.28 E-value=7.3e-06 Score=58.93 Aligned_cols=60 Identities=17% Similarity=0.274 Sum_probs=47.3
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCCCc------------e--EE--EECCCcEEEEcCCCeEEEEEeeeEEEE
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKGSS------------D--WV--EFGAGDLVTIPKGLSCTWDVSVAVDKY 63 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~g~------------e--~~--~~~~GD~v~~p~g~~~~~~~~~~~~k~ 63 (74)
.||.. +||....|+.||++|++.+.+.+.. . .+ .+++||+++||+|..+.-.-.+++.-+
T Consensus 274 ~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~~~~~~v 352 (434)
T 2ea7_A 274 KEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINATSNLNFF 352 (434)
T ss_dssp CTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEESSSEEEE
T ss_pred cCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcCCCeEEE
Confidence 46664 6788899999999999999875431 1 45 799999999999999998877765333
No 99
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.27 E-value=2.9e-06 Score=52.56 Aligned_cols=54 Identities=19% Similarity=0.080 Sum_probs=41.1
Q ss_pred ceEEEEEEecEEEEEeCCCceE--EEECCCcEEEEcCCCeEE-EEEeeeEEEEEEEecC
Q 037642 14 AEETCYLLKGKVKVYPKGSSDW--VEFGAGDLVTIPKGLSCT-WDVSVAVDKYYKFEST 69 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~--~~~~~GD~v~~p~g~~~~-~~~~~~~~k~y~~~~~ 69 (74)
..|..|||+|++....++ .. ..+++||.+++|+|..|. ....+....+.++..+
T Consensus 64 ~~ee~~VL~G~~~~~~g~--~~~~~~~~~Gd~~~~p~g~~H~p~~~~e~~~~l~~~~gp 120 (145)
T 2o1q_A 64 GPGEYFLTKGKMDVRGGK--AAGGDTAIAPGYGYESANARHDKTEFPVASEFYMSFLGP 120 (145)
T ss_dssp SCEEEEEEEEEEEETTCG--GGTSEEEESSEEEEECTTCEESCCEEEEEEEEEEEEESC
T ss_pred CCEEEEEEEeEEEEcCCC--EecceEeCCCEEEEECcCCccCCeECCCCeEEEEEECCc
Confidence 566699999999865433 34 799999999999999999 6667776555555443
No 100
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.25 E-value=3.8e-06 Score=59.97 Aligned_cols=55 Identities=18% Similarity=0.268 Sum_probs=42.0
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEE-eeeEEEEEE
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDV-SVAVDKYYK 65 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~-~~~~~k~y~ 65 (74)
+.|. ..|++|||+|++.++..+| +.+.+++||++++|+|..|.... .+.-...|+
T Consensus 139 HrH~-~~ev~~IleG~G~~t~v~G-~~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 139 HRHA-ASALRFIMEGSGAYTIVDG-HKVELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp EEES-SCEEEEEEECSCEEEEETT-EEEEECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred ccCC-cceEEEEEEeeEEEEEECC-EEEEEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 3444 4599999999997744444 58999999999999999999988 554333444
No 101
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.24 E-value=9.9e-06 Score=57.81 Aligned_cols=65 Identities=15% Similarity=0.011 Sum_probs=49.0
Q ss_pred CCceE--EEecCceEEEEEEecEEEEEe--CCCceEEEECCCcE------EEEcCCCeEEEEEee---eEEEEEEEec
Q 037642 4 SPGKF--QLKFDAEETCYLLKGKVKVYP--KGSSDWVEFGAGDL------VTIPKGLSCTWDVSV---AVDKYYKFES 68 (74)
Q Consensus 4 ~pg~~--~~~~~~~E~~~vleG~~~~~~--~~g~e~~~~~~GD~------v~~p~g~~~~~~~~~---~~~k~y~~~~ 68 (74)
.||.. +.+.+.+|+.||++|++.+.+ .++.++..+++||+ ++||+|..|.+.-.+ +++-+-++..
T Consensus 60 ~pgg~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~ 137 (397)
T 2phl_A 60 KPETLLLPQQADAELLLVVRSGSAILVLVKPDDRREYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMP 137 (397)
T ss_dssp CSSEEEEEEEESEEEEEEEEESEEEEEEEETTTEEEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEE
T ss_pred CCCcCccCEecCCCeEEEEEeeeEEEEEEeCCCcEEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecC
Confidence 56665 333588999999999999987 23336789999999 999999999997644 4544444443
No 102
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.24 E-value=2.1e-06 Score=59.17 Aligned_cols=52 Identities=15% Similarity=0.174 Sum_probs=41.8
Q ss_pred EEEe-cCceEEEEEEecEEEEEeCC-C-ceEEEECCCcEEEEcCCCeEEEEEeee
Q 037642 8 FQLK-FDAEETCYLLKGKVKVYPKG-S-SDWVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 8 ~~~~-~~~~E~~~vleG~~~~~~~~-g-~e~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
+.|| -+.+|++|+|+|.+.+.+.+ | -..+.+++||++++|+|..|.=.-.+.
T Consensus 44 ~d~H~~~~dE~FyqlkG~m~l~~~d~g~~~~V~i~eGemfllP~gv~HsP~r~~e 98 (286)
T 2qnk_A 44 KDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQRFAN 98 (286)
T ss_dssp CCEEECSSCEEEEEEESCEEEEEEETTEEEEEEECTTEEEEECTTCCEEEEECTT
T ss_pred ccCcCCCCCeEEEEEeCeEEEEEEeCCceeeEEECCCeEEEeCCCCCcCCcccCC
Confidence 4455 45799999999999999877 3 125899999999999999998755444
No 103
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.22 E-value=7.3e-06 Score=58.82 Aligned_cols=55 Identities=16% Similarity=0.236 Sum_probs=44.8
Q ss_pred CCceE--EEecCceEEEEEEecEEEEEe--CCCceEEEECCCcEEEEcCCCeEEEEEee
Q 037642 4 SPGKF--QLKFDAEETCYLLKGKVKVYP--KGSSDWVEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 4 ~pg~~--~~~~~~~E~~~vleG~~~~~~--~~g~e~~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
+|+.. +.|.+.+|++||++|++.+.+ .++.....|++||+++||+|..+.+.-.+
T Consensus 52 ~p~gl~~Phh~~A~ei~yV~~G~g~~g~V~~~~~~~~~l~~GDv~~~P~G~~h~~~N~g 110 (418)
T 3s7i_A 52 KPNTLVLPKHADADNILVIQQGQATVTVANGNNRKSFNLDEGHALRIPSGFISYILNRH 110 (418)
T ss_dssp CTTEEEEEEEESEEEEEEEEESEEEEEEECSSCEEEEEEETTEEEEECTTCEEEEEECC
T ss_pred cCCceeeeeeCCCCeEEEEEEeeEEEEEEecCCEEEEEecCCCEEEECCCCeEEEEecC
Confidence 46665 346789999999999998886 23335789999999999999999988754
No 104
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.19 E-value=7.8e-06 Score=57.99 Aligned_cols=46 Identities=15% Similarity=0.312 Sum_probs=41.9
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEE
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVD 61 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~ 61 (74)
..++++|++|++.+++++ +.+.+++||+|++|++..+++...++..
T Consensus 299 ~s~Vy~V~eG~G~~~I~~--~~~~w~~gD~fvvP~w~~h~~~n~~~a~ 344 (368)
T 3nw4_A 299 GSTVFQVFEGAGAVVMNG--ETTKLEKGDMFVVPSWVPWSLQAETQFD 344 (368)
T ss_dssp SCEEEEEEESCEEEEETT--EEEEECTTCEEEECTTCCEEEEESSSEE
T ss_pred ccEEEEEEeCcEEEEECC--EEEEecCCCEEEECCCCcEEEEeCCCEE
Confidence 569999999999999998 5799999999999999999999887653
No 105
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.19 E-value=5.1e-06 Score=58.91 Aligned_cols=54 Identities=17% Similarity=0.156 Sum_probs=43.3
Q ss_pred CCceE---EEecCceEEEEEEecEEE-EEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeE
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVK-VYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAV 60 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~-~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~ 60 (74)
.||.- +.|. ..|++|||+|++. +.++| +.+.+++||++++|+|..|...-.+.-
T Consensus 111 ~PG~~~~~HrH~-~~ev~~VleG~G~~~~vdG--~~~~~~~GD~v~iP~g~~H~~~N~gde 168 (368)
T 3nw4_A 111 GPRETAPEHRHS-QNAFRFVVEGEGVWTVVNG--DPVRMSRGDLLLTPGWCFHGHMNDTDQ 168 (368)
T ss_dssp CTTCEEEEEEES-SCEEEECSSCEEEEEEETT--EEEEEETTCEEEECTTCCEEEEECSSS
T ss_pred CCCCccCceecc-cceEEEEEecceEEEEECC--EEEEEeCCCEEEECCCCcEEeEeCCCC
Confidence 45553 3444 5799999999995 66666 579999999999999999999986543
No 106
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.17 E-value=2.2e-05 Score=57.38 Aligned_cols=67 Identities=13% Similarity=0.112 Sum_probs=49.9
Q ss_pred CCceEE--EecCceEEEEEEecEEEEEeCCC----------------------------ceEEEECCCcEEEEcCCCeEE
Q 037642 4 SPGKFQ--LKFDAEETCYLLKGKVKVYPKGS----------------------------SDWVEFGAGDLVTIPKGLSCT 53 (74)
Q Consensus 4 ~pg~~~--~~~~~~E~~~vleG~~~~~~~~g----------------------------~e~~~~~~GD~v~~p~g~~~~ 53 (74)
+||... ...+..+++||++|++.+.+... .+...|++||+++||+|..+.
T Consensus 53 ~pggl~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~ 132 (493)
T 2d5f_A 53 NRNGLHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPPGVPYW 132 (493)
T ss_dssp CTTEEEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEESCEEEEETTEEEEECTTCCEE
T ss_pred CCCcEeCceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccceEEEecCCCEEEECCCCcEE
Confidence 567752 23467899999999999987620 025789999999999999999
Q ss_pred EEEee--eEEEEEEEecCC
Q 037642 54 WDVSV--AVDKYYKFESTS 70 (74)
Q Consensus 54 ~~~~~--~~~k~y~~~~~~ 70 (74)
+.-.+ +++.+.+++...
T Consensus 133 ~~N~g~~~l~~v~~~d~~n 151 (493)
T 2d5f_A 133 TYNTGDEPVVAISLLDTSN 151 (493)
T ss_dssp EEECSSSCEEEEEEECTTC
T ss_pred EEeCCCCCEEEEEEecCcC
Confidence 98775 455555565443
No 107
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.13 E-value=1.3e-05 Score=55.32 Aligned_cols=53 Identities=15% Similarity=0.226 Sum_probs=48.0
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEe
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
..+-++++|||+..|++++. ++.|++||.++||+|..++|+..+..+.+++.-
T Consensus 225 ~~d~wiWqLEGss~Vt~~~q--~~~L~~~DsLLIpa~~~y~~~r~~gsv~L~I~~ 277 (286)
T 2qnk_A 225 NVDVWLWQLEGSSVVTMGGR--RLSLAPDDSLLVLAGTSYAWERTQGSVALSVTQ 277 (286)
T ss_dssp SSCEEEEEEESCEEEEETTE--EEEECTTEEEEECTTCCEEEEECTTCEEEEEEE
T ss_pred cCcEEEEEEcCceEEEECCe--EEeccCCCEEEecCCCeEEEEecCCeEEEEEEE
Confidence 45899999999999999994 799999999999999999999999888888743
No 108
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.10 E-value=1.8e-05 Score=57.55 Aligned_cols=66 Identities=17% Similarity=0.233 Sum_probs=49.3
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEe--CCCce--------------------------------------EEEECC
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYP--KGSSD--------------------------------------WVEFGA 40 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~--~~g~e--------------------------------------~~~~~~ 40 (74)
+|+.. ++| +.+|+.||++|++.+.+ .+..+ ...+++
T Consensus 58 ~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~ 136 (465)
T 3qac_A 58 EPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKFGMRGDRFQDQHQKIRHLRE 136 (465)
T ss_dssp CTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC------------------------------CCCCCCEEEEET
T ss_pred cCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhccccccccccccccccccccccccccccccceeeecC
Confidence 46664 566 89999999999998874 32112 248999
Q ss_pred CcEEEEcCCCeEEEEEee--eEEEEEEEecCC
Q 037642 41 GDLVTIPKGLSCTWDVSV--AVDKYYKFESTS 70 (74)
Q Consensus 41 GD~v~~p~g~~~~~~~~~--~~~k~y~~~~~~ 70 (74)
||+++||+|..|.+.-.+ ++..+.+++...
T Consensus 137 GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n 168 (465)
T 3qac_A 137 GDIFAMPAGVSHWAYNNGDQPLVAVILIDTAN 168 (465)
T ss_dssp TEEEEECTTCEEEEECCSSSCEEEEEEECTTS
T ss_pred CCEEEECCCCeEEEEcCCCCCEEEEEEEcCCC
Confidence 999999999999998764 566666666543
No 109
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.06 E-value=4.2e-05 Score=56.05 Aligned_cols=65 Identities=14% Similarity=0.182 Sum_probs=47.6
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeC--CCceE----------------------EEECCCcEEEEcCCCeEEEEE
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPK--GSSDW----------------------VEFGAGDLVTIPKGLSCTWDV 56 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~--~g~e~----------------------~~~~~GD~v~~p~g~~~~~~~ 56 (74)
+||.. ++| +..|++||++|++.+.+- +..++ ..|++||+|+||+|..+.+--
T Consensus 54 ~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~~l~~GDV~viPaG~~h~~~N 132 (496)
T 3ksc_A 54 QRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVNRFREGDIIAVPTGIVFWMYN 132 (496)
T ss_dssp CTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEEEECTTEEEEECTTCEEEEEE
T ss_pred cCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheeeccCCCCEEEECCCCcEEEEc
Confidence 46664 455 899999999999988872 21122 389999999999999998887
Q ss_pred ee--eEEEEEEEecC
Q 037642 57 SV--AVDKYYKFEST 69 (74)
Q Consensus 57 ~~--~~~k~y~~~~~ 69 (74)
.+ ++..+.+++..
T Consensus 133 ~G~~~lv~v~~~d~~ 147 (496)
T 3ksc_A 133 DQDTPVIAVSLTDIR 147 (496)
T ss_dssp CSSSCEEEEEEECTT
T ss_pred CCCCCEEEEEEeccC
Confidence 65 45555555443
No 110
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=98.06 E-value=1.3e-05 Score=52.87 Aligned_cols=53 Identities=8% Similarity=0.095 Sum_probs=43.6
Q ss_pred cCceEEEEEEecEEEEEeCCCce-EEEECCCcEEEEcCCCeEEEEEe----eeEEEEEE
Q 037642 12 FDAEETCYLLKGKVKVYPKGSSD-WVEFGAGDLVTIPKGLSCTWDVS----VAVDKYYK 65 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g~e-~~~~~~GD~v~~p~g~~~~~~~~----~~~~k~y~ 65 (74)
.+..|+++|++|++. .+++... .+.+.+||++++|+|..+.+... ++.....+
T Consensus 27 ~~~~~i~~v~~G~~~-~i~~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~~~~i 84 (276)
T 3gbg_A 27 INDYKMFWIDSGIAK-LIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVI 84 (276)
T ss_dssp CSSCEEEEESSSCEE-EEETTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEEEEEE
T ss_pred hcceEEEEEecCceE-EECCccceeEEEcCCCEEEEcCCCceeeccccCCCcceEEEEE
Confidence 478999999999999 8887300 69999999999999999999988 66644433
No 111
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.02 E-value=5.2e-05 Score=55.72 Aligned_cols=67 Identities=13% Similarity=0.156 Sum_probs=49.8
Q ss_pred CCceE--EEecCceEEEEEEecEEEEEeCCCc--------------------------------------eEEEECCCcE
Q 037642 4 SPGKF--QLKFDAEETCYLLKGKVKVYPKGSS--------------------------------------DWVEFGAGDL 43 (74)
Q Consensus 4 ~pg~~--~~~~~~~E~~~vleG~~~~~~~~g~--------------------------------------e~~~~~~GD~ 43 (74)
+||.. ....+..+++||++|++.+.+...+ ....|++||+
T Consensus 56 ~p~gl~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~qkv~~v~~GDv 135 (510)
T 3c3v_A 56 RRNALRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEEDQSQQQQDSHQKVHRFNEGDL 135 (510)
T ss_dssp CTTEEEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC--------------------CEEEEESCCEEECTTEE
T ss_pred CCCCCccceecCCCeEEEEEeCEEEEEEEeCCCccccccccccccccccccccccccccccccccccccceEEEecCCCE
Confidence 46665 2234689999999999998875410 1368999999
Q ss_pred EEEcCCCeEEEEEee--eEEEEEEEecCC
Q 037642 44 VTIPKGLSCTWDVSV--AVDKYYKFESTS 70 (74)
Q Consensus 44 v~~p~g~~~~~~~~~--~~~k~y~~~~~~ 70 (74)
++||+|..+.+.-.+ +++.+.+++...
T Consensus 136 i~iPaG~~hw~~N~g~~~l~~v~~~d~~n 164 (510)
T 3c3v_A 136 IAVPTGVAFWLYNDHDTDVVAVSLTDTNN 164 (510)
T ss_dssp EEECTTCEEEEEECSSSCEEEEEEECTTB
T ss_pred EEECCCCCEEEEeCCCCCEEEEEEeCCCC
Confidence 999999999998765 566666666554
No 112
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.01 E-value=5.7e-05 Score=54.49 Aligned_cols=57 Identities=16% Similarity=0.278 Sum_probs=45.0
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCCCc----------e----EEEECCCcEEEEcCCCeEEEEEeeeE
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKGSS----------D----WVEFGAGDLVTIPKGLSCTWDVSVAV 60 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~g~----------e----~~~~~~GD~v~~p~g~~~~~~~~~~~ 60 (74)
.||.. +||....|+.||++|++.+.+-+.. . ...+++||+++||+|..+.-.-.+++
T Consensus 289 ~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~~~~ 362 (445)
T 2cav_A 289 NEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAASDL 362 (445)
T ss_dssp CTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEESSSE
T ss_pred eCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcCCCe
Confidence 46664 6888899999999999998874321 1 35599999999999999987777653
No 113
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.97 E-value=4.9e-05 Score=54.53 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=44.0
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEeCC--C-------------------------ce-EEEECCCcEEEEcCCCeE
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYPKG--S-------------------------SD-WVEFGAGDLVTIPKGLSC 52 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~~~--g-------------------------~e-~~~~~~GD~v~~p~g~~~ 52 (74)
.||.. +||....|+.||++|++.+.+-+ + .. ...+++||+++||+|..+
T Consensus 271 ~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~ 350 (418)
T 3s7i_A 271 KEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPV 350 (418)
T ss_dssp CTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCE
T ss_pred cCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEE
Confidence 45554 57777899999999999887642 1 01 356899999999999999
Q ss_pred EEEEeeeE
Q 037642 53 TWDVSVAV 60 (74)
Q Consensus 53 ~~~~~~~~ 60 (74)
.+.-.+++
T Consensus 351 ~~~~~~~l 358 (418)
T 3s7i_A 351 AINASSEL 358 (418)
T ss_dssp EEEESSCE
T ss_pred EEECCCCE
Confidence 98877663
No 114
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=97.96 E-value=4.8e-05 Score=55.48 Aligned_cols=61 Identities=16% Similarity=0.208 Sum_probs=52.9
Q ss_pred eEEEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecCC
Q 037642 7 KFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESTS 70 (74)
Q Consensus 7 ~~~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~~ 70 (74)
.+-++.+.++++++.+|.+.|..+=| .+.++|||+++||.|.+.++++.++ ...|++...+
T Consensus 171 ~~f~NaDGD~Livpq~G~l~i~TEfG--~L~v~pgei~VIPRGi~frv~l~~p-~Rgyi~E~~g 231 (471)
T 1eyb_A 171 RCFYNSDGDFLIVPQKGNLLIYTEFG--KMLVQPNEICVIQRGMRFSIDVFEE-TRGYILEVYG 231 (471)
T ss_dssp EEEEESSEEEEEEEEESCEEEEETTE--EEEECTTEEEEECTTCCEEEECSSS-EEEEEEEEES
T ss_pred ceeecCCCCEEEEEEeCCEEEEEecc--cEEeccCCEEEECCccEEEEeeCCC-ceEEEEEccC
Confidence 34567889999999999999999998 5999999999999999999999885 4778876544
No 115
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.90 E-value=0.00036 Score=45.03 Aligned_cols=44 Identities=27% Similarity=0.359 Sum_probs=38.0
Q ss_pred ceEEEEEEecEEEEEeCCCc-------------------eEEEECCCcEEEEcCCCeEEEEEe
Q 037642 14 AEETCYLLKGKVKVYPKGSS-------------------DWVEFGAGDLVTIPKGLSCTWDVS 57 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~-------------------e~~~~~~GD~v~~p~g~~~~~~~~ 57 (74)
-.|-++|+.|.+++..++.. ..+.++|||.+.||+|..|.+...
T Consensus 80 K~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~ag 142 (175)
T 2y0o_A 80 KQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAG 142 (175)
T ss_dssp CCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEEE
T ss_pred CceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEeC
Confidence 67999999999999997641 126999999999999999999983
No 116
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.87 E-value=4.1e-05 Score=48.74 Aligned_cols=53 Identities=11% Similarity=0.090 Sum_probs=43.2
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEee----eEEEEEEEec
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSV----AVDKYYKFES 68 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~----~~~k~y~~~~ 68 (74)
+..|..|||+|.+... +++ ...+++||.+.+|+|..|+..+.+ .+..+++..+
T Consensus 62 ~g~ee~~VL~G~f~~~-~~~--~~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~G 118 (165)
T 3cjx_A 62 TGTVHMYTISGCWYYT-EYP--GQKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLSG 118 (165)
T ss_dssp SSCEEEEEEESEEEET-TCT--TSCEETTEEEEECTTCEECEECCTTCSSCEEEEEEEES
T ss_pred CCCEEEEEEEEEEEEC-CCc--eEEECCCeEEEeCCCCceeeEeCCCCCCCcEEEEEEec
Confidence 4689999999999873 221 367899999999999999999987 7777886654
No 117
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.74 E-value=0.00011 Score=49.96 Aligned_cols=58 Identities=16% Similarity=0.213 Sum_probs=46.0
Q ss_pred EEEecCceEEEEEEecEEEEEe---CCCceEEEECC-C---cEEEEcCCCeEEEEEee--eEEEEEEE
Q 037642 8 FQLKFDAEETCYLLKGKVKVYP---KGSSDWVEFGA-G---DLVTIPKGLSCTWDVSV--AVDKYYKF 66 (74)
Q Consensus 8 ~~~~~~~~E~~~vleG~~~~~~---~~g~e~~~~~~-G---D~v~~p~g~~~~~~~~~--~~~k~y~~ 66 (74)
|++|....|.++|++|++.+.+ ..+ +.+.+.. | |.++||+|..|.....+ ++.-.|..
T Consensus 287 ~h~h~~~~e~~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~~ 353 (369)
T 3st7_A 287 NHWHHTKNEKFLVVSGKGVIRFRHVNDD-EIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWV 353 (369)
T ss_dssp EEECSSCCEEEEEEESEEEEEEEETTCC-CCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEEE
T ss_pred cccccCcceEEEEEeeeEEEEEEcCCCC-cEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEec
Confidence 5788889999999999999942 333 5688888 8 99999999999999876 45444443
No 118
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.70 E-value=7.7e-05 Score=47.08 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=41.3
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEe----eeEEEEEEEecC
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVS----VAVDKYYKFEST 69 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~----~~~~k~y~~~~~ 69 (74)
...|..|||+|+..+. +.+ ..+.+||.++.|+|..|+..+. +.+..+++...+
T Consensus 61 ~g~ee~~VL~G~~~~~-e~~---~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~~~~G~ 117 (159)
T 3ebr_A 61 TGTVIVYTVQGSWRYK-EHD---WVAHAGSVVYETASTRHTPQSAYAEGPDIITFNIVAGE 117 (159)
T ss_dssp SSCEEEEEEESCEEET-TSS---CCBCTTCEEEECSSEEECEEESSSSSSCEEEEEEEESC
T ss_pred CCCEEEEEEEeEEEEe-CCC---eEECCCeEEEECCCCcceeEeCCCCCCCEEEEEEecCc
Confidence 3578889999998764 332 4899999999999999999998 667656555443
No 119
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=97.67 E-value=0.00055 Score=49.86 Aligned_cols=35 Identities=11% Similarity=0.076 Sum_probs=26.6
Q ss_pred EEECCCcEEEEcCCCeEEEEEee--eEEEEEEEecCC
Q 037642 36 VEFGAGDLVTIPKGLSCTWDVSV--AVDKYYKFESTS 70 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~~~~~~ 70 (74)
..|++||++.||+|..+.+.-.+ +++-+.+++...
T Consensus 147 ~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~n 183 (466)
T 3kgl_A 147 EHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLAS 183 (466)
T ss_dssp EEEETTEEEEECTTCEEEEECCSSSCEEEEEEEESSS
T ss_pred ccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCCC
Confidence 38999999999999999998765 455555554433
No 120
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.50 E-value=0.00012 Score=47.30 Aligned_cols=45 Identities=22% Similarity=0.222 Sum_probs=36.6
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEE--eeeEEEE
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDV--SVAVDKY 63 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~--~~~~~k~ 63 (74)
+..|+.|||+|.+. .+ ...+.+||.+.+|+|..|+..+ .+.+..+
T Consensus 144 ~g~E~~~VL~G~f~--de----~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l 190 (195)
T 2q1z_B 144 RGLELTLVLQGAFR--DE----TDRFGAGDIEIADQELEHTPVAERGLDCICL 190 (195)
T ss_dssp SSCEEEEEEESEEE--CS----SSEEETTCEEEECSSCCCCCEECSSSCEEEE
T ss_pred CCeEEEEEEEEEEE--CC----cEEECCCeEEEeCcCCccCCEeCCCCCEEEE
Confidence 57899999999965 22 2589999999999999999998 6666443
No 121
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=97.30 E-value=0.0018 Score=46.06 Aligned_cols=48 Identities=6% Similarity=0.080 Sum_probs=36.9
Q ss_pred ceEEEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCC-eEEEE
Q 037642 6 GKFQLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGL-SCTWD 55 (74)
Q Consensus 6 g~~~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~-~~~~~ 55 (74)
+......+...++.|++|++++..++ ++..+++||.++||++. ..+.+
T Consensus 334 ~~~~~~~~~~~il~v~~G~~~l~~~~--~~~~l~~G~~~fvpa~~~~~~i~ 382 (394)
T 2wfp_A 334 QETSIGQHSAAILFCVEGEAVLRKDE--QRLVLKPGESAFIGADESPVNAS 382 (394)
T ss_dssp SCEEECCSSCEEEEEEEEEEEEEETT--EEEEECTTCEEEECGGGCCEEEE
T ss_pred CeEEecCCCcEEEEEEeceEEEEECC--eEEEEccCcEEEEeCCCceEEEE
Confidence 33333445678999999999999876 46899999999999984 44444
No 122
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.20 E-value=0.0042 Score=38.55 Aligned_cols=53 Identities=9% Similarity=0.047 Sum_probs=42.6
Q ss_pred EEEecCceEEEEEEecEEEEEeCCCc--eEEEECCCc-EEEEcCCCeEEEEEeeeE
Q 037642 8 FQLKFDAEETCYLLKGKVKVYPKGSS--DWVEFGAGD-LVTIPKGLSCTWDVSVAV 60 (74)
Q Consensus 8 ~~~~~~~~E~~~vleG~~~~~~~~g~--e~~~~~~GD-~v~~p~g~~~~~~~~~~~ 60 (74)
|+.|....+++++++|++.+.+++|. +.+.|.+.. .+.||+|..++....++-
T Consensus 50 ~H~Hk~~~q~li~l~Gs~~v~ldDg~~~~~~~L~~~~~gL~IppgvWh~~~~~s~~ 105 (141)
T 2pa7_A 50 FHAHKKLEQVLVCLNGSCRVILDDGNIIQEITLDSPAVGLYVGPAVWHEMHDFSSD 105 (141)
T ss_dssp EEEESSCCEEEEEEESCEEEEEECSSCEEEEEECCTTEEEEECTTCEEEEECCCTT
T ss_pred cCcCCCceEEEEEEccEEEEEEECCcEEEEEEECCCCcEEEeCCCEEEEEEEcCCC
Confidence 56778889999999999999998884 235565544 589999999999887653
No 123
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=97.07 E-value=0.0018 Score=40.93 Aligned_cols=65 Identities=18% Similarity=0.110 Sum_probs=42.2
Q ss_pred CCce-EEEe-cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEE-EEEeeeEEEEEEEec
Q 037642 4 SPGK-FQLK-FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCT-WDVSVAVDKYYKFES 68 (74)
Q Consensus 4 ~pg~-~~~~-~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~-~~~~~~~~k~y~~~~ 68 (74)
+||. +..| .+..|.++||+|...+...+-.....+.+|+.++.|+|..|+ +...+....++++..
T Consensus 54 ~pG~~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~~~~~aGsYv~ePpGs~H~p~~~~~~~~~~~~~~G 121 (153)
T 3bal_A 54 PAGSSFASHIHAGPGEYFLTKGKMEVRGGEQEGGSTAYAPSYGFESSGALHGKTFFPVESQFYMTFLG 121 (153)
T ss_dssp CTTEEECCEEESSCEEEEEEESEEEETTCGGGTSEEEESSEEEEECTTCEESCCEESSCEEEEEEEES
T ss_pred CCCCCccCccCCCCEEEEEEEEEEEecCccccCccccCCCeEEEcCCCCcccceeCCCCeEEEEEEEC
Confidence 4555 3222 356788999999997644221012678999999999999998 444544434444443
No 124
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.07 E-value=0.003 Score=41.72 Aligned_cols=55 Identities=20% Similarity=0.270 Sum_probs=40.9
Q ss_pred CCceE-EEe-cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEE
Q 037642 4 SPGKF-QLK-FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYK 65 (74)
Q Consensus 4 ~pg~~-~~~-~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~ 65 (74)
+||.. ..| .+..|..|||+|.+. +++ ..+.+||.+..|+|..|...+.+.+. +|+
T Consensus 51 ~pG~~~p~H~H~g~Ee~~VL~G~f~--d~~----~~~~~Gd~~~~P~g~~H~p~a~~gc~-~~v 107 (223)
T 3o14_A 51 APGSRFSAHTHDGGEEFIVLDGVFQ--DEH----GDYPAGTYVRNPPTTSHVPGSAEGCT-IFV 107 (223)
T ss_dssp CTTEECCCEECTTCEEEEEEEEEEE--ETT----EEEETTEEEEECTTCEECCEESSCEE-EEE
T ss_pred CCCCCcccccCCCCEEEEEEEeEEE--ECC----eEECCCeEEEeCCCCccccEeCCCCE-EEE
Confidence 45553 223 347899999999975 333 48999999999999999988877764 444
No 125
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.05 E-value=0.0083 Score=38.44 Aligned_cols=61 Identities=11% Similarity=0.011 Sum_probs=48.0
Q ss_pred EEEecCceEEEEEEecEEEEEeCCCc---------eEEEEC---CCcEEEEcCCCeEEEEEeee--EEEEEEEec
Q 037642 8 FQLKFDAEETCYLLKGKVKVYPKGSS---------DWVEFG---AGDLVTIPKGLSCTWDVSVA--VDKYYKFES 68 (74)
Q Consensus 8 ~~~~~~~~E~~~vleG~~~~~~~~g~---------e~~~~~---~GD~v~~p~g~~~~~~~~~~--~~k~y~~~~ 68 (74)
+++|....+++.|++|++.+.+.+.. ..+.|. +.-.++||+|..|.+.+.++ ..-.|.++.
T Consensus 68 ~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~~s~ 142 (174)
T 3ejk_A 68 WKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANCTDI 142 (174)
T ss_dssp EEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEEESS
T ss_pred cEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEECCC
Confidence 46777789999999999999985542 246677 56799999999999998765 666677654
No 126
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=96.86 E-value=0.013 Score=40.11 Aligned_cols=40 Identities=15% Similarity=0.186 Sum_probs=32.4
Q ss_pred Cce-EEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCC-eEEEE
Q 037642 13 DAE-ETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGL-SCTWD 55 (74)
Q Consensus 13 ~~~-E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~-~~~~~ 55 (74)
+.. .++.|++| +++..++ +...+++||.++||++. ..+.+
T Consensus 246 ~~~~~il~v~~G-~~i~~~~--~~~~l~~G~~~~ipa~~~~~~i~ 287 (300)
T 1zx5_A 246 GGVMNILYAAEG-YFILRGK--ETADLHRGYSCLVPASTDSFTVE 287 (300)
T ss_dssp CSBCEEEEEEES-CEEEESS--SEEEECTTCEEEECTTCCEEEEE
T ss_pred CCceEEEEEccc-EEEEeCC--eEEEEccceEEEEeCCCceEEEE
Confidence 456 89999999 9998855 36899999999999987 44443
No 127
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=96.83 E-value=0.01 Score=40.89 Aligned_cols=45 Identities=11% Similarity=0.248 Sum_probs=34.9
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeE
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAV 60 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~ 60 (74)
+...++.|++|++++..++ +...+++||.++||++.. .+++.+.+
T Consensus 268 ~~~~il~v~~G~~~l~~~~--~~~~l~~G~~~~vpa~~~-~~~i~g~~ 312 (319)
T 1qwr_A 268 ESFLICSVIEGSGLLKYED--KTCPLKKGDHFILPAQMP-DFTIKGTC 312 (319)
T ss_dssp SSCEEEEEEEEEEEEEETT--EEEEEETTCEEEECTTCC-CEEEEEEE
T ss_pred CccEEEEEEcCeEEEEECC--EEEEEcCCcEEEEeCCCc-eEEEEece
Confidence 4578999999999998854 478999999999999872 23444443
No 128
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=96.81 E-value=0.015 Score=39.74 Aligned_cols=61 Identities=18% Similarity=0.182 Sum_probs=47.0
Q ss_pred EEEecCceEEEE-EEecEEEEEeCCCceEEEE-CC---------CcEEEEcCCCeEEEEEeeeEEEEEEEecCCC
Q 037642 8 FQLKFDAEETCY-LLKGKVKVYPKGSSDWVEF-GA---------GDLVTIPKGLSCTWDVSVAVDKYYKFESTSS 71 (74)
Q Consensus 8 ~~~~~~~~E~~~-vleG~~~~~~~~g~e~~~~-~~---------GD~v~~p~g~~~~~~~~~~~~k~y~~~~~~~ 71 (74)
+....+..|+++ .|.|.++|+.++. ++.+ .. .|++++|+|...+.+...+ .++|++.++..
T Consensus 42 ~~~~~~~~E~~iv~l~G~~~V~~~g~--~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~~-~~~~v~sAp~~ 113 (270)
T 2qjv_A 42 ITLPSDERERCLVLVAGLASVXAADS--FFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAETD-LELAVCSAPGF 113 (270)
T ss_dssp EEECCSSEEEEEEEEESCEEEEETTE--EEEEECCCSSGGGCSCCCEEEECSSCCEEEEESSS-EEEEEEEEECC
T ss_pred EEecCCCcEEEEEEecceEEEEECCE--EEeccccccccccCCCCcEEEECCCCEEEEEecCC-ceEEEEeeecC
Confidence 345555566665 5799999999983 5655 32 5999999999999998888 69999988753
No 129
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=96.79 E-value=0.017 Score=42.78 Aligned_cols=36 Identities=22% Similarity=0.202 Sum_probs=28.8
Q ss_pred EEEECCCcEEEEcCCCeEEEEEee--eEEEEEEEecCC
Q 037642 35 WVEFGAGDLVTIPKGLSCTWDVSV--AVDKYYKFESTS 70 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~~~~~--~~~k~y~~~~~~ 70 (74)
...+++||++.||+|..+.|--.+ ++.-+++++.++
T Consensus 173 v~~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~Dt~n 210 (531)
T 3fz3_A 173 TRRIREGDVVAIPAGVAYWSYNDGDQELVAVNLFHVSS 210 (531)
T ss_dssp CEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEETTC
T ss_pred eecccCCcEEEECCCCeEEEEeCCCceEEEEEEEcccc
Confidence 357899999999999999998765 466677776654
No 130
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=96.49 E-value=0.016 Score=41.74 Aligned_cols=46 Identities=13% Similarity=0.180 Sum_probs=36.2
Q ss_pred cCceEEEEEEecEEEEEeCCCceE-EEECCCcEEEEcCCCeEEEEEe
Q 037642 12 FDAEETCYLLKGKVKVYPKGSSDW-VEFGAGDLVTIPKGLSCTWDVS 57 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g~e~-~~~~~GD~v~~p~g~~~~~~~~ 57 (74)
.+...+++|++|++++..+++... ..+++||.++||++...+.+..
T Consensus 377 ~~~~~illv~~G~g~i~~~~~~~~~~~l~~G~~~fvpa~~~~~i~g~ 423 (440)
T 1pmi_A 377 LNGPSIVIATNGKGTIQITGDDSTKQKIDTGYVFFVAPGSSIELTAD 423 (440)
T ss_dssp CSSCEEEEEEESEEEEEETTCGGGCEEEETTCEEEECTTCCEEEEEC
T ss_pred CCCcEEEEEEeCeEEEEeCCcccceEEeccCCEEEEeCCCcEEEEEe
Confidence 456789999999999998764112 7899999999999966555543
No 131
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=96.35 E-value=0.011 Score=40.88 Aligned_cols=56 Identities=14% Similarity=0.086 Sum_probs=43.7
Q ss_pred CceEEEEE-EecEEEEEeCCCceEEEECCCcEEEEcCCCe-EEEEE---eeeEEEEEEEecCCC
Q 037642 13 DAEETCYL-LKGKVKVYPKGSSDWVEFGAGDLVTIPKGLS-CTWDV---SVAVDKYYKFESTSS 71 (74)
Q Consensus 13 ~~~E~~~v-leG~~~~~~~~g~e~~~~~~GD~v~~p~g~~-~~~~~---~~~~~k~y~~~~~~~ 71 (74)
+..|+++| |.|.++|+.++ +.+.+.+-|.+++|+|.+ .++.. ..+ .++|++.++..
T Consensus 77 ~~rE~~iV~lgG~~~V~vdg--~~f~lg~~dalYVp~G~~~v~~as~d~~~~-a~fav~sAPa~ 137 (289)
T 1ywk_A 77 ERRELGVINIGGPGFIEIDG--AKETMKKQDGYYIGKETKHVRFSSENPDNP-AKFYISCVPAH 137 (289)
T ss_dssp TTEEEEEEECSSCEEEEETT--EEEEECTTCEEEECTTCCCEEEEESCTTSC-CCEEEEEEECS
T ss_pred CCcEEEEEEccCeEEEEECC--EEEecCCCCEEEeCCCCeEEEEEecCCCCC-eEEEEEccccC
Confidence 45676655 68999999998 468999999999999987 66654 233 58999988753
No 132
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=95.85 E-value=0.016 Score=36.70 Aligned_cols=56 Identities=13% Similarity=0.055 Sum_probs=39.4
Q ss_pred CCceE-EEecC-ceEEEEEEecEEEEEeCCC-------------------------------------ceEEEECCCcEE
Q 037642 4 SPGKF-QLKFD-AEETCYLLKGKVKVYPKGS-------------------------------------SDWVEFGAGDLV 44 (74)
Q Consensus 4 ~pg~~-~~~~~-~~E~~~vleG~~~~~~~~g-------------------------------------~e~~~~~~GD~v 44 (74)
.+|+. ..|++ .+-+...+.|+=++.+-.- .-...++|||++
T Consensus 132 ~~gs~t~~H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~L 211 (235)
T 4gjz_A 132 PQGTISPLHQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEIL 211 (235)
T ss_dssp CTTCEEEEECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEE
T ss_pred CCCCCceeeeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEE
Confidence 44554 35666 4667778899888775100 014689999999
Q ss_pred EEcCCCeEEEEEeee
Q 037642 45 TIPKGLSCTWDVSVA 59 (74)
Q Consensus 45 ~~p~g~~~~~~~~~~ 59 (74)
+||+|+.|.-...+.
T Consensus 212 yiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 212 FIPVKYWHYVRALDL 226 (235)
T ss_dssp EECTTCEEEEEESSS
T ss_pred EeCCCCcEEEEECCC
Confidence 999999998776654
No 133
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=95.51 E-value=0.038 Score=37.96 Aligned_cols=57 Identities=18% Similarity=0.257 Sum_probs=43.9
Q ss_pred CceEEEEE-EecEEEEEeCCCceEEEECCCcEEEEcCCCe-EEEEEeee--EEEEEEEecCCC
Q 037642 13 DAEETCYL-LKGKVKVYPKGSSDWVEFGAGDLVTIPKGLS-CTWDVSVA--VDKYYKFESTSS 71 (74)
Q Consensus 13 ~~~E~~~v-leG~~~~~~~~g~e~~~~~~GD~v~~p~g~~-~~~~~~~~--~~k~y~~~~~~~ 71 (74)
+..|+++| |.|.+.|+.++ +.+.+..-|.+++|+|.+ .++..... -.++|++.++..
T Consensus 77 ~~rE~~iV~l~G~~~V~vdG--~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav~sAPa~ 137 (282)
T 1xru_A 77 ERRELGVINIGGAGTITVDG--QCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYYNCAPAH 137 (282)
T ss_dssp TTEEEEEEECSSCEEEEETT--EEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEEEEEECS
T ss_pred CCcEEEEEEccCeEEEEECC--EEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEEEccccC
Confidence 45666655 68999999998 468999999999999997 66664431 258999988753
No 134
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=95.48 E-value=0.16 Score=33.26 Aligned_cols=46 Identities=17% Similarity=0.271 Sum_probs=35.5
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEE
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYK 65 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~ 65 (74)
...|+ +||+|++. .++ ..+.+|+.+.+|+|..++......-..+|+
T Consensus 165 gG~Ei-lVL~G~~~--d~~----~~~~~GsWlR~P~gs~h~~~ag~~g~~i~~ 210 (223)
T 3o14_A 165 GGIEV-LVLDGDVT--VND----EVLGRNAWLRLPEGEALSATAGARGAKIWM 210 (223)
T ss_dssp SCEEE-EEEEEEEE--ETT----EEECTTEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred CcEEE-EEEEeEEE--ECC----ceECCCeEEEeCCCCccCcEECCCCeEEEE
Confidence 45675 99999964 333 489999999999999999998444345665
No 135
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=95.45 E-value=0.1 Score=35.09 Aligned_cols=50 Identities=12% Similarity=0.108 Sum_probs=38.6
Q ss_pred EEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEe
Q 037642 16 ETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 16 E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
-+.||++|++.+...++ +...+.+||.+.|..+...+.+..++. .+.+++
T Consensus 204 ~~l~v~~G~v~v~g~~~-~~~~l~~gd~~~l~~~~~l~l~a~~~a-~~LL~d 253 (256)
T 2vec_A 204 AYLQSIHGKFHALTHHE-EKAALTCGDGAFIRDEANITLVADSPL-RALLID 253 (256)
T ss_dssp EEEEEEESCEEEEETTE-EEEEECTTCEEEEESCSEEEEEESSSE-EEEEEE
T ss_pred EEEEEEECEEEECCccc-cceEECCCCEEEECCCCeEEEEeCCCC-EEEEEE
Confidence 78899999999875444 357899999999998888888776665 344444
No 136
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=94.69 E-value=0.48 Score=30.34 Aligned_cols=60 Identities=13% Similarity=0.143 Sum_probs=42.6
Q ss_pred EEEe--cCceEEEEEEecEEE-EEeCCCc--------eEEEECC--CcEEEEcCCCeEEEEEeee-EEEEEEEe
Q 037642 8 FQLK--FDAEETCYLLKGKVK-VYPKGSS--------DWVEFGA--GDLVTIPKGLSCTWDVSVA-VDKYYKFE 67 (74)
Q Consensus 8 ~~~~--~~~~E~~~vleG~~~-~~~~~g~--------e~~~~~~--GD~v~~p~g~~~~~~~~~~-~~k~y~~~ 67 (74)
+++| ....+++.|++|++. +.++... ..+.|.+ +..++||+|..|.+.+.+. ..-.|.++
T Consensus 63 lH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s 136 (185)
T 1ep0_A 63 LHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYKCT 136 (185)
T ss_dssp EEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEES
T ss_pred ceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEecC
Confidence 4677 678999999999964 3333221 3355655 6899999999999998876 44455543
No 137
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=94.67 E-value=0.081 Score=32.76 Aligned_cols=62 Identities=15% Similarity=0.313 Sum_probs=41.2
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeCCCceEEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.||..-+.. ..+.+++|++|.+.+..++|. ...+.+||++-. ..-...+..+.+++ .+|.+.
T Consensus 101 ~~ge~I~~~g~~~~~ly~I~~G~v~v~~~~g~-~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~-~l~~i~ 169 (202)
T 3bpz_A 101 QPGDYIIREGTIGKKMYFIQHGVVSVLTKGNK-EMKLSDGSYFGEICLLTRGRRTASVRADTYC-RLYSLS 169 (202)
T ss_dssp CTTCEEECTTSBCCEEEEEEECEEEEECTTSC-CEEEETTCEECHHHHHHCSBCSSEEEESSCE-EEEEEE
T ss_pred CCCCEEEECCCcCCeEEEEeccEEEEEECCCe-EEEEcCCCEeccHHHhcCCCcccEEEEeeEE-EEEEEE
Confidence 456554443 257899999999999988874 578999998732 11224455555555 555554
No 138
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=94.60 E-value=0.096 Score=35.20 Aligned_cols=45 Identities=16% Similarity=0.220 Sum_probs=36.2
Q ss_pred eEEEe--cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeE
Q 037642 7 KFQLK--FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSC 52 (74)
Q Consensus 7 ~~~~~--~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~ 52 (74)
.|..| .+.+.+-|||+|.++-.+.-|+ ...++|||+-.+.+|.-.
T Consensus 76 gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn-~~~i~~GdvQ~MtAG~GI 122 (256)
T 2vec_A 76 AFQPRTYPKVDILNVILDGEAEYRDSEGN-HVQASAGEALLLSTQPGV 122 (256)
T ss_dssp EEEEECCSSEEEEEEEEESEEEEEETTSC-EEEEETTEEEEECCCTTC
T ss_pred ccCCcCCCCcEEEEEEEeeEEEEEeCCCC-EEEECCCeEEEEECCCCe
Confidence 36554 4456688999999999999884 699999999999887643
No 139
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=94.50 E-value=0.32 Score=30.73 Aligned_cols=55 Identities=18% Similarity=0.144 Sum_probs=39.5
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEe---CCCc----eEEEECCCcEEEEcCCCeEEEEEee
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYP---KGSS----DWVEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~---~~g~----e~~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
.||.. +-|.....++.||+|+.+.+. +++. ....+.+||.+++|++.-|+.....
T Consensus 77 ~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~ 141 (171)
T 3eqe_A 77 PPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPT 141 (171)
T ss_dssp CTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCS
T ss_pred CCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCC
Confidence 46654 223345788889999999764 3321 2478999999999999999987644
No 140
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=94.42 E-value=0.57 Score=29.98 Aligned_cols=60 Identities=17% Similarity=0.094 Sum_probs=42.5
Q ss_pred EEEe--cCceEEEEEEecEEE-EEeCCCc--------eEEEECC--CcEEEEcCCCeEEEEEeee-EEEEEEEe
Q 037642 8 FQLK--FDAEETCYLLKGKVK-VYPKGSS--------DWVEFGA--GDLVTIPKGLSCTWDVSVA-VDKYYKFE 67 (74)
Q Consensus 8 ~~~~--~~~~E~~~vleG~~~-~~~~~g~--------e~~~~~~--GD~v~~p~g~~~~~~~~~~-~~k~y~~~ 67 (74)
+++| .....++.|++|++. +.+|... ..+.|.+ +..++||+|..|.+.+.+. ..-.|.++
T Consensus 64 ~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s 137 (184)
T 2ixk_A 64 LHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEYAEFLYKTT 137 (184)
T ss_dssp EEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEES
T ss_pred EEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCCEEEEEeCC
Confidence 4666 668999999999963 4443321 3355555 6899999999999998876 44455544
No 141
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=94.36 E-value=0.17 Score=35.00 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=27.9
Q ss_pred eEEEECCCcEEEEcCCCeEEEEEee----eEEEEEEEecC
Q 037642 34 DWVEFGAGDLVTIPKGLSCTWDVSV----AVDKYYKFEST 69 (74)
Q Consensus 34 e~~~~~~GD~v~~p~g~~~~~~~~~----~~~k~y~~~~~ 69 (74)
-...++|||+++||+|+.|.-...+ .+--.|.+...
T Consensus 261 ~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~~~~ 300 (349)
T 3d8c_A 261 YETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA 300 (349)
T ss_dssp EEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEEECC
T ss_pred EEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEcCCC
Confidence 3578999999999999999998875 35555555443
No 142
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=94.35 E-value=0.086 Score=30.58 Aligned_cols=32 Identities=13% Similarity=0.226 Sum_probs=25.5
Q ss_pred EEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecC
Q 037642 36 VEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFEST 69 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~ 69 (74)
-+|++||+++||+|+...-..... -.|+...+
T Consensus 8 ~~l~~G~v~vVPq~~~v~~~A~~~--le~v~F~t 39 (93)
T 1dgw_Y 8 ATLSEGDIIVIPSSFPVALKAASD--LNMVGIGV 39 (93)
T ss_dssp EEECTTCEEEECTTCCEEEEESSS--EEEEEEEE
T ss_pred ceecCCcEEEECCCCceeEEecCC--eEEEEEEe
Confidence 579999999999999999998875 45554433
No 143
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=94.22 E-value=0.21 Score=32.47 Aligned_cols=51 Identities=8% Similarity=-0.029 Sum_probs=36.7
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeE---EEEEeeeEEEEEEE
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSC---TWDVSVAVDKYYKF 66 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~---~~~~~~~~~k~y~~ 66 (74)
..-++|+++|...+..+++ +...+.+||++.+-..... ........ ..+++
T Consensus 140 ~~~~v~~l~G~~~v~~~~~-~~~~L~~~d~l~~~~~~~~~~~~~~~~g~~-~~~~i 193 (200)
T 1yll_A 140 STLLLFAQQDGVAISLQGQ-PRGQLAAHDCLCAEGLQGLQHWRLTAHEPA-WVCAV 193 (200)
T ss_dssp SEEEEEESSSCEEEEETTE-EEEEECTTCEEEEESCCSCEEEEEEEEEEE-EEEEE
T ss_pred CEEEEEEccCcEEEEcCCC-ceeecCCCCEEEEeCCCccceeEeccCCce-EEEEE
Confidence 4578899999999988765 5799999999999665533 44444443 34443
No 144
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=94.17 E-value=0.24 Score=32.89 Aligned_cols=48 Identities=21% Similarity=0.256 Sum_probs=39.6
Q ss_pred eEEE--ecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEE
Q 037642 7 KFQL--KFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWD 55 (74)
Q Consensus 7 ~~~~--~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~ 55 (74)
.|.. |.+.+.+-|||+|.+.-.+.-|+ ...++|||+-.+-+|.-....
T Consensus 53 gf~~HPHrg~EtvTyvl~G~~~H~DS~Gn-~~~i~~GdvQ~MtAG~GI~Hs 102 (242)
T 1tq5_A 53 GFGTHPHKDMEILTYVLEGTVEHQDSMGN-KEQVPAGEFQIMSAGTGIRHS 102 (242)
T ss_dssp EEEEEEECSCEEEEEEEESEEEEEESSSC-EEEEETTCEEEEECTTCEEEE
T ss_pred cCCCcCCCCcEEEEEEEEeEEEEEeCCCC-cEEECCCcEEEEECCCCcEEE
Confidence 3544 45677899999999999999874 699999999999888776665
No 145
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=94.15 E-value=0.37 Score=31.31 Aligned_cols=64 Identities=8% Similarity=0.053 Sum_probs=50.0
Q ss_pred ceEEEecCceEEEEEEecE-EEEEeCCCceEEEECCCcEEEEcCCCeEEEEEe-eeEEEEEEEecCC
Q 037642 6 GKFQLKFDAEETCYLLKGK-VKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVS-VAVDKYYKFESTS 70 (74)
Q Consensus 6 g~~~~~~~~~E~~~vleG~-~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~-~~~~k~y~~~~~~ 70 (74)
|.|..-...+-+..+|+|. +.+..++. ....+.|++.+.|+.+....-+.. ++++.+=++.+.+
T Consensus 58 g~FS~FpG~dR~l~lL~G~gl~L~~~g~-~~~~L~~~~p~~F~G~~~v~a~L~~G~v~DfNlM~rr~ 123 (193)
T 3esg_A 58 GGFSSFAGYQRVITVIQGAGMVLTVDGE-EQRGLLPLQPFAFRGDSQVSCRLITGPIRDFNLIYSPE 123 (193)
T ss_dssp EECCCCTTCEEEEEEEESSCEEEEETTS-CCEEECBTCCEEEETTSCEEEEESSSCEEEEEEEECTT
T ss_pred CCCCCCCCceEEEEEEcCCcEEEEeCCC-ccEecCCCCCEEeCCCCeEEEEECCCCEEEEEEEEcCC
Confidence 4444334578999999997 99999875 468899999999999999988865 5777776666553
No 146
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=94.11 E-value=0.22 Score=36.05 Aligned_cols=58 Identities=14% Similarity=0.157 Sum_probs=42.1
Q ss_pred cCCceE-EEecCc---eEEEEEEecEEEEEe-----------------------------CCCceEEEECCCcEEEEcCC
Q 037642 3 CSPGKF-QLKFDA---EETCYLLKGKVKVYP-----------------------------KGSSDWVEFGAGDLVTIPKG 49 (74)
Q Consensus 3 ~~pg~~-~~~~~~---~E~~~vleG~~~~~~-----------------------------~~g~e~~~~~~GD~v~~p~g 49 (74)
..+|++ .+|+|. .-+..++.|+=...+ +.. -...++|||+++||.|
T Consensus 203 Gp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~-~~v~l~pGE~LfIPsG 281 (451)
T 2yu1_A 203 SVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDC-QRIELKQGYTFVIPSG 281 (451)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCC-EEEEECTTCEEEECTT
T ss_pred ccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccc-eEEEECCCcEEEeCCC
Confidence 345665 567765 357888999876552 123 4688999999999999
Q ss_pred CeEEEEEeeeEE
Q 037642 50 LSCTWDVSVAVD 61 (74)
Q Consensus 50 ~~~~~~~~~~~~ 61 (74)
+-|.-...+...
T Consensus 282 WwH~V~nledsI 293 (451)
T 2yu1_A 282 WIHAVYTPTDTL 293 (451)
T ss_dssp CEEEEECSSCEE
T ss_pred ceEEEecCCCeE
Confidence 999988776543
No 147
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=94.04 E-value=0.51 Score=30.63 Aligned_cols=59 Identities=15% Similarity=0.210 Sum_probs=44.1
Q ss_pred EEEecCceEEEEEEe-cEE-EEEeCCC-------ceEEEECCCcEEEEcCCCeEEEEEeee-EEEEEEEe
Q 037642 8 FQLKFDAEETCYLLK-GKV-KVYPKGS-------SDWVEFGAGDLVTIPKGLSCTWDVSVA-VDKYYKFE 67 (74)
Q Consensus 8 ~~~~~~~~E~~~vle-G~~-~~~~~~g-------~e~~~~~~GD~v~~p~g~~~~~~~~~~-~~k~y~~~ 67 (74)
+++| ....++.|++ |++ .+.+|.. -..+.|.++-.++||+|..|.+.+.+. ..-.|+++
T Consensus 75 lH~h-~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y~~s 143 (197)
T 1nxm_A 75 LHAE-PWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDFVAYSYLVN 143 (197)
T ss_dssp EEEC-SSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSEEEEEEEES
T ss_pred eeec-ccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCCeEEEEECC
Confidence 3454 6889999999 994 5555542 245788899999999999999998876 44555544
No 148
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=93.90 E-value=0.73 Score=29.33 Aligned_cols=45 Identities=22% Similarity=0.432 Sum_probs=34.0
Q ss_pred cCceEEEEEEecEE-EEEe--CCCceEEE------ECCCcE--EEEcCCCeEEEEEe
Q 037642 12 FDAEETCYLLKGKV-KVYP--KGSSDWVE------FGAGDL--VTIPKGLSCTWDVS 57 (74)
Q Consensus 12 ~~~~E~~~vleG~~-~~~~--~~g~e~~~------~~~GD~--v~~p~g~~~~~~~~ 57 (74)
.+.+|+.+..+|.. ++.+ ++| .... +.+|+. +++|+|.....+..
T Consensus 67 v~sdEiW~~~~G~pL~l~l~~~dg-~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~ 122 (170)
T 1yud_A 67 LTADEMWYFHAGQSLTIYMISPEG-ELTTAQLGLDLAAGERPQFLVPKGCIFGSAMN 122 (170)
T ss_dssp CSSCEEEEEEEESCEEEEEECTTS-CEEEEEESSCTTTTEESCEEECTTCEEEEEES
T ss_pred cCCCEEEEEEcCCCEEEEEEcCCC-CEEEEEeCCCcccCceeEEEECCCCEEEEEEC
Confidence 35899999999985 5554 344 2344 677999 99999999888765
No 149
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=93.77 E-value=0.11 Score=29.87 Aligned_cols=39 Identities=15% Similarity=0.184 Sum_probs=29.7
Q ss_pred CceEEEecC--ceEEEEEEecEEEEEeCCCceEEEECCCcEE
Q 037642 5 PGKFQLKFD--AEETCYLLKGKVKVYPKGSSDWVEFGAGDLV 44 (74)
Q Consensus 5 pg~~~~~~~--~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v 44 (74)
+|..-+..+ .+.+++|++|.+.+...+|. ...+.+||++
T Consensus 47 ~g~~i~~~g~~~~~~y~i~~G~v~~~~~~g~-~~~l~~G~~f 87 (134)
T 2d93_A 47 AGAIILEDGQELDSWYVILNGTVEISHPDGK-VENLFMGNSF 87 (134)
T ss_dssp SSCEEECTTCEECEEEECCBSCEEEECSSSC-EEEECTTCEE
T ss_pred CCCEEEeCCCCCCeEEEEEeCEEEEEcCCCc-EEEecCCCcc
Confidence 454444432 47899999999999987774 4889999987
No 150
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=93.73 E-value=0.37 Score=29.44 Aligned_cols=48 Identities=13% Similarity=0.140 Sum_probs=37.6
Q ss_pred CceEEEEEEecEEEEEe--CCC----ceEEEECCCcEEEEcCCCeEEEEE-eeeE
Q 037642 13 DAEETCYLLKGKVKVYP--KGS----SDWVEFGAGDLVTIPKGLSCTWDV-SVAV 60 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~--~~g----~e~~~~~~GD~v~~p~g~~~~~~~-~~~~ 60 (74)
...+...||+|++.+.. ++| .+.....+|+..+||++..++-+. ++++
T Consensus 38 Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~ 92 (127)
T 3bb6_A 38 GVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDT 92 (127)
T ss_dssp TEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTC
T ss_pred CEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCE
Confidence 35789999999998873 322 245678899999999999999997 4444
No 151
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=93.69 E-value=0.19 Score=36.13 Aligned_cols=50 Identities=20% Similarity=0.213 Sum_probs=37.1
Q ss_pred EEecC-ceEEEEEEecEEEEEeCCC-------------------ceEEEECCCcEEEEcCCCeEEEEEee
Q 037642 9 QLKFD-AEETCYLLKGKVKVYPKGS-------------------SDWVEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 9 ~~~~~-~~E~~~vleG~~~~~~~~g-------------------~e~~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
..|+| .+-+..-++|+=+.++-.. .....++|||+++||+|+.|.-+..+
T Consensus 154 ~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 154 PPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp CSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred cceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 35665 4667778889877774110 12578999999999999999988764
No 152
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=93.67 E-value=0.88 Score=29.48 Aligned_cols=60 Identities=13% Similarity=0.221 Sum_probs=42.2
Q ss_pred EEEecC---ceEEEEEEecEE-EEEeCCCc--------eEEEECC--CcEEEEcCCCeEEEEEeee-EEEEEEEe
Q 037642 8 FQLKFD---AEETCYLLKGKV-KVYPKGSS--------DWVEFGA--GDLVTIPKGLSCTWDVSVA-VDKYYKFE 67 (74)
Q Consensus 8 ~~~~~~---~~E~~~vleG~~-~~~~~~g~--------e~~~~~~--GD~v~~p~g~~~~~~~~~~-~~k~y~~~ 67 (74)
++++.. ...++.|++|++ .+.+|... ..+.|.+ +..++||+|..+.+.+.+. ..-.|.++
T Consensus 80 lH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ly~~s 154 (196)
T 1wlt_A 80 LHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSIVIYFITH 154 (196)
T ss_dssp EEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSEEEEEEEES
T ss_pred EEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEEeC
Confidence 455654 789999999999 44443321 3356664 7899999999999998876 33445543
No 153
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=93.58 E-value=0.13 Score=35.40 Aligned_cols=27 Identities=19% Similarity=-0.032 Sum_probs=23.1
Q ss_pred eEEEECCCcEEEEcCCCeEEEEEeeeE
Q 037642 34 DWVEFGAGDLVTIPKGLSCTWDVSVAV 60 (74)
Q Consensus 34 e~~~~~~GD~v~~p~g~~~~~~~~~~~ 60 (74)
....++|||+++||+|+.|.-...+..
T Consensus 240 ~~~~L~pGD~LyiP~gWwH~v~~l~~s 266 (338)
T 3al5_A 240 YECSLEAGDVLFIPALWFHNVISEEFG 266 (338)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSCE
T ss_pred EEEEECCCCEEEECCCCeEEEeeCCCE
Confidence 357899999999999999998877653
No 154
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=93.55 E-value=0.96 Score=29.53 Aligned_cols=61 Identities=16% Similarity=0.238 Sum_probs=42.5
Q ss_pred EEEec---CceEEEEEEecEEE-EE--eCCCc------eEEEECC--CcEEEEcCCCeEEEEEeee-EEEEEEEec
Q 037642 8 FQLKF---DAEETCYLLKGKVK-VY--PKGSS------DWVEFGA--GDLVTIPKGLSCTWDVSVA-VDKYYKFES 68 (74)
Q Consensus 8 ~~~~~---~~~E~~~vleG~~~-~~--~~~g~------e~~~~~~--GD~v~~p~g~~~~~~~~~~-~~k~y~~~~ 68 (74)
++++. ...+++.|++|++. +. +..++ ..+.|.+ +-.++||+|..|-+.+.++ ..-.|.++.
T Consensus 85 lH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y~~s~ 160 (205)
T 3ryk_A 85 LHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMYKVDE 160 (205)
T ss_dssp EEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEEEESS
T ss_pred eEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEEEcCC
Confidence 35554 47999999999963 33 32232 3456765 7999999999999998775 445566543
No 155
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=93.54 E-value=0.61 Score=30.20 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=37.6
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEe----CCCc-----eEEEECCCcEEEEcC--CCeEEEEE
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYP----KGSS-----DWVEFGAGDLVTIPK--GLSCTWDV 56 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~----~~g~-----e~~~~~~GD~v~~p~--g~~~~~~~ 56 (74)
.||.. +-|. ...++.||+|..+.+. ++|. +...+.+||.+.|++ |.-|+-..
T Consensus 87 ~PGq~spiHdH~-~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N 152 (208)
T 2gm6_A 87 GPGQRTPIHDHT-VWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHN 152 (208)
T ss_dssp CTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEE
T ss_pred CCCcccCcccCC-cceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEecc
Confidence 46665 2233 4899999999997764 3221 257899999999999 87787763
No 156
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=93.46 E-value=0.27 Score=30.16 Aligned_cols=63 Identities=6% Similarity=0.140 Sum_probs=41.3
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeCCCceEEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.||..-+.. ..+.+++|++|.+.+...+|.....+.+||.+-- ..-...+..+.+++ .+|.+.
T Consensus 100 ~~ge~I~~~G~~~~~ly~I~~G~v~~~~~~g~~~~~l~~G~~fGe~~~~~~~~~~~~~~a~~~~-~l~~i~ 169 (198)
T 2ptm_A 100 QPADYVIQEGTFGDRMFFIQQGIVDIIMSDGVIATSLSDGSYFGEICLLTRERRVASVKCETYC-TLFSLS 169 (198)
T ss_dssp CTTCEEECTTSCCSEEEEEEECCEEEECTTSCEEEEECTTCEESCHHHHHSSCCSSEEEESSCE-EEEEEE
T ss_pred CCCCEEEECCCcCcEEEEEEeCEEEEEecCCeEEEEecCCCEechHHHcCCCccceEEEEeeEE-EEEEEe
Confidence 456554443 3578999999999999766644568999998731 22234555566665 455554
No 157
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=93.39 E-value=0.56 Score=31.08 Aligned_cols=48 Identities=17% Similarity=0.202 Sum_probs=36.5
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEEec
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~ 68 (74)
..-+.||++|++.+ ++ ..+.+||++.|..+...+.+..++.+ +-++..
T Consensus 181 ~~~~~~v~~G~v~v--~g----~~l~~gd~~~~~~~~~l~l~a~~~a~-~Ll~~~ 228 (242)
T 1tq5_A 181 RRVWIQVVKGNVTI--NG----VKASTSDGLAIWDEQAISIHADSDSE-VLLFDL 228 (242)
T ss_dssp CEEEEEEEESEEEE--TT----EEEETTCEEEEESCSCEEEEESSSEE-EEEEEE
T ss_pred cEEEEEEccCcEEE--CC----EEeCCCCEEEECCCCeEEEEeCCCCE-EEEEEC
Confidence 46789999999877 33 37999999999998888888766653 444443
No 158
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=93.05 E-value=0.35 Score=28.37 Aligned_cols=62 Identities=15% Similarity=0.202 Sum_probs=41.0
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeCCCceEEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+..++. ....+.+||++-. ..-...+..+.+++ .++.+.
T Consensus 67 ~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~-~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~-~~~~i~ 135 (154)
T 3pna_A 67 IAGETVIQQGDEGDNFYVIDQGEMDVYVNNE-WATSVGEGGSFGELALIYGTPRAATVKAKTNV-KLWGID 135 (154)
T ss_dssp CTTCEEECTTSCCCEEEEEEESCEEEEETTE-EEEEECTTCEECCHHHHHCCCCSSEEEESSCE-EEEEEE
T ss_pred CCCCEEEeCCCCCCeEEEEEecEEEEEECCE-EEEEecCCCEeeehHhhcCCCcceEEEECcce-EEEEEe
Confidence 345444433 35889999999999999774 5677999998742 22234455666664 455554
No 159
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=93.04 E-value=0.37 Score=27.63 Aligned_cols=62 Identities=19% Similarity=0.213 Sum_probs=40.7
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeCCCceEEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+..++. ....+.+||++-- ..-...+..+.+++ .++.+.
T Consensus 52 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~g~-~~~~~~~G~~fGe~~~l~~~~~~~~~~a~~~~-~v~~i~ 120 (139)
T 3ocp_A 52 GKDSCIIKEGDVGSLVYVMEDGKVEVTKEGV-KLCTMGPGKVFGELAILYNCTRTATVKTLVNV-KLWAID 120 (139)
T ss_dssp CSSCEEECTTSCCCEEEEEEECCEEEEETTE-EEEEECTTCEESCHHHHHCCCCSSEEEESSCE-EEEEEE
T ss_pred CCCCEEEeCCCcCCEEEEEEeCEEEEEECCE-EEEEeCCCCEeccHHHHCCCCcceEEEECcce-EEEEEc
Confidence 344444433 35889999999999988774 5678999998742 23344456666665 455544
No 160
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=92.76 E-value=0.12 Score=35.80 Aligned_cols=23 Identities=22% Similarity=0.437 Sum_probs=21.1
Q ss_pred EEEECCCcEEEEcCCCeEEEEEe
Q 037642 35 WVEFGAGDLVTIPKGLSCTWDVS 57 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~~~~ 57 (74)
...++|||+++||+|+.|.-...
T Consensus 219 ~~~L~pGD~LyiP~gwwH~v~s~ 241 (342)
T 1vrb_A 219 IVNLTPGTMLYLPRGLWHSTKSD 241 (342)
T ss_dssp EEEECTTCEEEECTTCEEEEECS
T ss_pred EEEECCCcEEEeCCCccEEEEEC
Confidence 57899999999999999998877
No 161
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=92.73 E-value=0.86 Score=31.41 Aligned_cols=47 Identities=17% Similarity=0.386 Sum_probs=37.1
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCC-eEEEEE--eeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGL-SCTWDV--SVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~-~~~~~~--~~~~~k~y~~~ 67 (74)
..| +|||.|.+.+ ++ ..+.+|.-.++|+|. ...|++ .+++.-+++-+
T Consensus 112 d~E-~fVL~G~i~~--G~----~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL~fe~ 161 (303)
T 2qdr_A 112 DLE-IFVIKGAIQL--GE----WQLNKHSYSFIPAGVRIGSWKVLGGEEAEILWMEN 161 (303)
T ss_dssp CEE-EEEEESEEEE--TT----EEECTTEEEEECTTCCBCCEEEETTSCEEEEEEEC
T ss_pred ceE-EEEEEeEEEe--CC----EEecCCceEEecCCCccCceeecCCCCcEEEEEec
Confidence 456 8999998765 33 689999999999998 578898 77777777633
No 162
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=92.27 E-value=0.54 Score=27.32 Aligned_cols=62 Identities=13% Similarity=0.247 Sum_probs=41.5
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEc-------CCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIP-------KGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p-------~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+...+. ....+.+||.+--. .-...+..+.+++ .++.+.
T Consensus 56 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~-~~~~~~~G~~fG~~~~~~~~~~~~~~~~~a~~~~-~v~~i~ 126 (160)
T 4f8a_A 56 APGDLIYHAGESVDSLCFVVSGSLEVIQDDE-VVAILGKGDVFGDVFWKEATLAQSCANVRALTYC-DLHVIK 126 (160)
T ss_dssp CTTCEEECTTSBCCEEEEEEESEEEEEETTE-EEEEEETTCEEECCTTTCSSCCBCSSEEEESSCE-EEEEEE
T ss_pred CCCCEEEeCCCCccEEEEEEeeEEEEEECCE-EEEEecCCCEeCcHHHhcCcccceEEEEEECCce-EEEEEc
Confidence 345444443 35899999999999998774 46789999998641 2344556666665 455544
No 163
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=92.09 E-value=1.7 Score=29.29 Aligned_cols=46 Identities=13% Similarity=0.081 Sum_probs=33.7
Q ss_pred cCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcC-C----CeEEEEEeeeEE
Q 037642 12 FDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPK-G----LSCTWDVSVAVD 61 (74)
Q Consensus 12 ~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~-g----~~~~~~~~~~~~ 61 (74)
....-+.||++|++.+ ++. ...+.+||++.|.. + ...+.+..++.+
T Consensus 186 ~~~~~~lyv~~G~v~v--~g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~~~a~ 236 (277)
T 2p17_A 186 GHYNGFLYILEGSGVF--GAD--NIEGKAGQALFFSRHNRGEETELNVTAREKLR 236 (277)
T ss_dssp TTCEEEEEEEESEEEE--TTT--TEEEETTEEEEECCCCTTCEEEEEEEESSSEE
T ss_pred CCCEEEEEEEeCeEEE--CCC--ceEeCCCcEEEEcCCCCCccceEEEEeCCCcE
Confidence 3457899999999766 442 24799999999986 7 666666656643
No 164
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=92.09 E-value=0.27 Score=34.08 Aligned_cols=27 Identities=15% Similarity=-0.050 Sum_probs=23.6
Q ss_pred EEEECCCcEEEEcCCCeEEEEEeeeEE
Q 037642 35 WVEFGAGDLVTIPKGLSCTWDVSVAVD 61 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~~~~~~~~ 61 (74)
...++|||+++||+|+.|.-...+...
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~si 283 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDTTI 283 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSCEE
T ss_pred EEEECCCCEEEeCCCCcEEEecCCCeE
Confidence 478999999999999999998887643
No 165
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=92.01 E-value=0.5 Score=29.21 Aligned_cols=63 Identities=14% Similarity=0.275 Sum_probs=42.1
Q ss_pred CCceEEEecC--ceEEEEEEecEEEEEeCCCceEEEECCCcEEEE----cC---CCeEEEEEeeeEEEEEEEec
Q 037642 4 SPGKFQLKFD--AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI----PK---GLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 4 ~pg~~~~~~~--~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~----p~---g~~~~~~~~~~~~k~y~~~~ 68 (74)
.||..-+..+ .+.+++|++|.+.+..++. ....+.+||.+-- .. -...+....+++ .+|.+..
T Consensus 104 ~~ge~I~~~G~~~~~ly~I~~G~v~v~~~~~-~~~~l~~G~~fGe~~~~~~~~~~~~~~v~a~~~~-~l~~i~~ 175 (212)
T 3ukn_A 104 APGEFLIRQGDALQAIYFVCSGSMEVLKDNT-VLAILGKGDLIGSDSLTKEQVIKTNANVKALTYC-DLQYISL 175 (212)
T ss_dssp CTTCEEECTTSBCCEEEEEEECCEEEESSSC-EEEEECTTCEEECSCCSSSSCCBBCSEEEESSCE-EEEEEEH
T ss_pred CCCCEEEECCCcccEEEEEEecEEEEEECCe-EEEEecCCCCcCcHHhccCCCCCcceEEEEcccE-EEEEEeH
Confidence 4666544432 5899999999999998774 5678999999852 22 233455556665 5555543
No 166
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=91.96 E-value=0.49 Score=31.93 Aligned_cols=40 Identities=15% Similarity=0.332 Sum_probs=28.3
Q ss_pred EEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeee
Q 037642 18 CYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 18 ~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
...+.|.-.....+ ..+.|+||+.+.||+|..|.|...+.
T Consensus 158 ~V~~DG~~~~~~aG--~~i~L~PGESiTl~Pg~~H~F~ae~g 197 (246)
T 3kmh_A 158 TVVIDGCRQKHTAG--SQLRLSPGESICLPPGLYHSFWAEAG 197 (246)
T ss_dssp EEEETTEEEEECTT--CEEEECTTCEEEECTTEEEEEEECTT
T ss_pred EEecCCeEEEeCCC--CEEEECCCCeEecCCCCEEEEEecCC
Confidence 33334444333333 35789999999999999999998876
No 167
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=91.90 E-value=1.6 Score=27.85 Aligned_cols=60 Identities=17% Similarity=0.108 Sum_probs=42.0
Q ss_pred EEEec---CceEEEEEEecEEE-EEeCCC--------ceEEEECC--CcEEEEcCCCeEEEEEeee-EEEEEEEe
Q 037642 8 FQLKF---DAEETCYLLKGKVK-VYPKGS--------SDWVEFGA--GDLVTIPKGLSCTWDVSVA-VDKYYKFE 67 (74)
Q Consensus 8 ~~~~~---~~~E~~~vleG~~~-~~~~~g--------~e~~~~~~--GD~v~~p~g~~~~~~~~~~-~~k~y~~~ 67 (74)
+++|. ....++.|++|++. +.+|.. -..+.|.+ +..++||+|..|.+.+.+. ..-.|.++
T Consensus 62 lH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s 136 (183)
T 1dzr_A 62 LHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKAT 136 (183)
T ss_dssp EEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEES
T ss_pred eEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCeEEEEEcC
Confidence 45665 67999999999964 333332 13355655 6899999999999998876 44445543
No 168
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=91.61 E-value=1.9 Score=28.28 Aligned_cols=60 Identities=10% Similarity=0.027 Sum_probs=41.5
Q ss_pred EEEecC---ceEEEEEEecEEE-EEeCCC--------ceEEEECC--CcEEEEcCCCeEEEEEeee-EEEEEEEe
Q 037642 8 FQLKFD---AEETCYLLKGKVK-VYPKGS--------SDWVEFGA--GDLVTIPKGLSCTWDVSVA-VDKYYKFE 67 (74)
Q Consensus 8 ~~~~~~---~~E~~~vleG~~~-~~~~~g--------~e~~~~~~--GD~v~~p~g~~~~~~~~~~-~~k~y~~~ 67 (74)
+++|.. ...++.|++|++. +.+|.. -..+.|.+ +..++||+|..|.+.+.+. ..-.|.++
T Consensus 70 lH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~~ly~~s 144 (216)
T 2c0z_A 70 IHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEATLCYLSS 144 (216)
T ss_dssp EEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEEEEEEEES
T ss_pred CEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCeEEEEecC
Confidence 456654 7899999999964 443332 13356665 5799999999999998876 33445443
No 169
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=91.25 E-value=2 Score=27.87 Aligned_cols=60 Identities=15% Similarity=0.181 Sum_probs=42.8
Q ss_pred EEEecC---ceEEEEEEecEE-EEEeCCCc--------eEEEECC--CcEEEEcCCCeEEEEEeee-EEEEEEEe
Q 037642 8 FQLKFD---AEETCYLLKGKV-KVYPKGSS--------DWVEFGA--GDLVTIPKGLSCTWDVSVA-VDKYYKFE 67 (74)
Q Consensus 8 ~~~~~~---~~E~~~vleG~~-~~~~~~g~--------e~~~~~~--GD~v~~p~g~~~~~~~~~~-~~k~y~~~ 67 (74)
+++|.. ...++.|++|++ .+.+|... ..+.|.+ +..++||+|..|.+.+.+. ..-.|.++
T Consensus 62 lH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a~~~y~~s 136 (205)
T 1oi6_A 62 IHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDTVMSYMLS 136 (205)
T ss_dssp EEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTEEEEEEES
T ss_pred eeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCeEEEEecC
Confidence 456654 789999999996 44454431 3466666 5889999999999998775 44555544
No 170
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=91.23 E-value=0.29 Score=27.27 Aligned_cols=23 Identities=17% Similarity=0.104 Sum_probs=19.5
Q ss_pred EEecCceEEEEEEecEEEEEeCC
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKG 31 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~ 31 (74)
+||..+.|+.||++|++.+.+-+
T Consensus 52 H~hprA~ei~~V~~G~~~v~~V~ 74 (79)
T 1dgw_X 52 HYNSRATVILVANEGRAEVELVG 74 (79)
T ss_dssp EEESSCEEEEEEEESCEEEEEEE
T ss_pred ccCCCCcEEEEEEeceEEEEEec
Confidence 67778999999999999887643
No 171
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=90.95 E-value=0.41 Score=33.89 Aligned_cols=59 Identities=17% Similarity=0.138 Sum_probs=42.4
Q ss_pred cCCceE-EEecCc---eEEEEEEecEEEEEeC-----------------------------CCceEEEECCCcEEEEcCC
Q 037642 3 CSPGKF-QLKFDA---EETCYLLKGKVKVYPK-----------------------------GSSDWVEFGAGDLVTIPKG 49 (74)
Q Consensus 3 ~~pg~~-~~~~~~---~E~~~vleG~~~~~~~-----------------------------~g~e~~~~~~GD~v~~p~g 49 (74)
..+|++ .+|.|. .-+..++.|+=...+- .. -...++|||+++||.|
T Consensus 154 Gp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~-~ev~l~pGEtLfIPsG 232 (371)
T 3k3o_A 154 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC-YKCSVKQGQTLFIPTG 232 (371)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCC-EEEEEETTCEEEECTT
T ss_pred cCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCce-EEEEECCCcEEEeCCC
Confidence 456666 567764 3467889998666531 12 3578999999999999
Q ss_pred CeEEEEEeeeEEE
Q 037642 50 LSCTWDVSVAVDK 62 (74)
Q Consensus 50 ~~~~~~~~~~~~k 62 (74)
+-|.-...+....
T Consensus 233 WwH~V~nledSIa 245 (371)
T 3k3o_A 233 WIHAVLTPVDCLA 245 (371)
T ss_dssp CEEEEEEEEEEEE
T ss_pred CeEEEecCCCeEE
Confidence 9998887776543
No 172
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=90.89 E-value=0.4 Score=34.94 Aligned_cols=60 Identities=13% Similarity=0.088 Sum_probs=42.6
Q ss_pred cCCceE-EEecCc---eEEEEEEecEEEEEeC-----------------------------CCceEEEECCCcEEEEcCC
Q 037642 3 CSPGKF-QLKFDA---EETCYLLKGKVKVYPK-----------------------------GSSDWVEFGAGDLVTIPKG 49 (74)
Q Consensus 3 ~~pg~~-~~~~~~---~E~~~vleG~~~~~~~-----------------------------~g~e~~~~~~GD~v~~p~g 49 (74)
..+|++ .+|+|. .-++.++.|+=.+.+- .. -...++|||+++||.|
T Consensus 273 G~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~-~~~~l~pGe~lfIPsG 351 (488)
T 3kv5_D 273 GVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKC-YKCVVKQGHTLFVPTG 351 (488)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCC-EEEEEETTCEEEECTT
T ss_pred cCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccce-EEEeeCCCCEEEeCCC
Confidence 345666 567764 3477888998666531 11 2578999999999999
Q ss_pred CeEEEEEeeeEEEE
Q 037642 50 LSCTWDVSVAVDKY 63 (74)
Q Consensus 50 ~~~~~~~~~~~~k~ 63 (74)
+.|.-...+....+
T Consensus 352 WwH~V~nledsIai 365 (488)
T 3kv5_D 352 WIHAVLTSQDCMAF 365 (488)
T ss_dssp CEEEEEEEEEEEEE
T ss_pred ceEEeeCCCCeEEE
Confidence 99988877765443
No 173
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=90.85 E-value=0.37 Score=29.98 Aligned_cols=53 Identities=13% Similarity=0.162 Sum_probs=36.4
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEE----E-cCCCeEEEEEeeeEEEEEEEe
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVT----I-PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~----~-p~g~~~~~~~~~~~~k~y~~~ 67 (74)
..+.+++|++|.+.+..++. ....+.+||.+- + ..-...+....+++ .++.+.
T Consensus 47 ~~~~~y~i~~G~v~v~~~~~-~~~~~~~g~~fGe~~l~~~~~~~~tv~a~~~~-~~~~i~ 104 (246)
T 3of1_A 47 QGDYFYVVEKGTVDFYVNDN-KVNSSGPGSSFGELALMYNSPRAATVVATSDC-LLWALD 104 (246)
T ss_dssp CCCEEEEEEECCEEEESTTS-CCEEECTTCEECHHHHHHTCCCSSEEEESSCE-EEEEEE
T ss_pred CCCEEEEEEeeEEEEEECCE-EEEecCCCCeeehhHHhcCCCCCcEEEECCCe-EEEEEE
Confidence 35899999999999998775 568899999884 1 22223455555554 444443
No 174
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=90.44 E-value=1.8 Score=26.02 Aligned_cols=49 Identities=18% Similarity=0.163 Sum_probs=39.4
Q ss_pred ceEEEEEEecEEEEEe--CCC----ceEEEECCCcEEEEcCCCeEEEEEeeeEEE
Q 037642 14 AEETCYLLKGKVKVYP--KGS----SDWVEFGAGDLVTIPKGLSCTWDVSVAVDK 62 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~--~~g----~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k 62 (74)
.....-||+|++.+.. +++ .+...+.+|+..+||+...+.-+.+++++.
T Consensus 38 tWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f 92 (119)
T 3dl3_A 38 VFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQF 92 (119)
T ss_dssp EEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEE
T ss_pred EEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEE
Confidence 4677889999999994 222 145788999999999999999998887643
No 175
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=90.33 E-value=0.28 Score=35.99 Aligned_cols=55 Identities=20% Similarity=0.274 Sum_probs=39.2
Q ss_pred CCce--EEEecCc-eEEEEEEecEEEEEeCCC-----------------------ceEEEECCCcEEEEcCCCeEEEEEe
Q 037642 4 SPGK--FQLKFDA-EETCYLLKGKVKVYPKGS-----------------------SDWVEFGAGDLVTIPKGLSCTWDVS 57 (74)
Q Consensus 4 ~pg~--~~~~~~~-~E~~~vleG~~~~~~~~g-----------------------~e~~~~~~GD~v~~p~g~~~~~~~~ 57 (74)
.+|. +..|+|. +-++.=++|+=..++-.. .....++|||+++||+|+.|.-...
T Consensus 172 p~Gs~g~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~ 251 (489)
T 4diq_A 172 PPNSQGFAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQ 251 (489)
T ss_dssp CSSBCCSCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBC
T ss_pred CCCcccccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEec
Confidence 4453 3467764 666666788777665211 0247899999999999999999987
Q ss_pred e
Q 037642 58 V 58 (74)
Q Consensus 58 ~ 58 (74)
+
T Consensus 252 ~ 252 (489)
T 4diq_A 252 D 252 (489)
T ss_dssp S
T ss_pred C
Confidence 5
No 176
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=90.10 E-value=0.48 Score=33.91 Aligned_cols=29 Identities=14% Similarity=0.012 Sum_probs=23.2
Q ss_pred EEEECCCcEEEEcCCCeEEEEEeeeEEEE
Q 037642 35 WVEFGAGDLVTIPKGLSCTWDVSVAVDKY 63 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~~~~~~~~k~ 63 (74)
++.-.+||+|+||+|+.|+-.-.....|+
T Consensus 294 ~~~Q~~GeavfiPaG~~HQV~Nl~~~i~v 322 (392)
T 2ypd_A 294 TLIQFLGDAIVLPAGALHQVQNFHSCIQV 322 (392)
T ss_dssp EEEEETTCEEEECTTCEEEEEESSEEEEE
T ss_pred EEEEcCCCEEEecCCCHHHHhcccchhhH
Confidence 46678999999999999997766655554
No 177
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=89.89 E-value=0.57 Score=33.41 Aligned_cols=59 Identities=19% Similarity=0.244 Sum_probs=42.6
Q ss_pred cCCceE-EEecCc---eEEEEEEecEEEEEe-----------------------------CCCceEEEECCCcEEEEcCC
Q 037642 3 CSPGKF-QLKFDA---EETCYLLKGKVKVYP-----------------------------KGSSDWVEFGAGDLVTIPKG 49 (74)
Q Consensus 3 ~~pg~~-~~~~~~---~E~~~vleG~~~~~~-----------------------------~~g~e~~~~~~GD~v~~p~g 49 (74)
...|++ .+|.|. .-+..++.|+=...+ +.+ -...++|||+++||.|
T Consensus 181 Gp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~-~ev~l~pGEtlfIPsG 259 (392)
T 3pua_A 181 CVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKC-YKCIVKQGQTLFIPSG 259 (392)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCC-EEEEEETTCEEEECTT
T ss_pred eCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccce-EEEEECCCcEEeeCCC
Confidence 345666 467664 567888999866654 122 3588999999999999
Q ss_pred CeEEEEEeeeEEE
Q 037642 50 LSCTWDVSVAVDK 62 (74)
Q Consensus 50 ~~~~~~~~~~~~k 62 (74)
+-|.--..+....
T Consensus 260 WwH~V~nledSIa 272 (392)
T 3pua_A 260 WIYATLTPVDCLA 272 (392)
T ss_dssp CEEEEEEEEEEEE
T ss_pred ceEEEecCCCEEE
Confidence 9998887776543
No 178
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=89.74 E-value=1 Score=28.88 Aligned_cols=61 Identities=15% Similarity=0.207 Sum_probs=38.8
Q ss_pred CceEEEec--CceEEEEEEecEEEEEeCCCceEEEECCCcEEEE----c-CCCeEEEEEeeeEEEEEEEe
Q 037642 5 PGKFQLKF--DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI----P-KGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 5 pg~~~~~~--~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~----p-~g~~~~~~~~~~~~k~y~~~ 67 (74)
+|..-+.. ..+.+++|++|.+.+..++. ....+.+||.+-- . .-...+....+++ .++.+.
T Consensus 69 ~g~~i~~~G~~~~~~y~i~~G~v~~~~~g~-~~~~l~~G~~fGe~~l~~~~~~~~tv~a~~~~-~~~~i~ 136 (291)
T 2qcs_B 69 AGETVIQQGDEGDNFYVIDQGEMDVYVNNE-WATSVGEGGSFGELALIYGTPRAATVKAKTNV-KLWGID 136 (291)
T ss_dssp TTCEEECTTSBCCEEEEEEECCEEEEETTE-EEEEECTTCEECGGGGTCCCBCSSEEEESSCE-EEEEEE
T ss_pred CCCEEEeCCCCCceEEEEeeeEEEEEECCe-EEEEcCCCCccchHHHhcCCCCceEEEECCCE-EEEEEE
Confidence 44443332 25889999999999999764 5678999998731 1 1123455555554 444443
No 179
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=89.70 E-value=1.7 Score=28.12 Aligned_cols=64 Identities=11% Similarity=0.103 Sum_probs=48.2
Q ss_pred CceEEEecCceEEEEEEecE-EEEEeCCCceEEEE-CCCcEEEEcCCCeEEEEEe-eeEEEEEEEecCC
Q 037642 5 PGKFQLKFDAEETCYLLKGK-VKVYPKGSSDWVEF-GAGDLVTIPKGLSCTWDVS-VAVDKYYKFESTS 70 (74)
Q Consensus 5 pg~~~~~~~~~E~~~vleG~-~~~~~~~g~e~~~~-~~GD~v~~p~g~~~~~~~~-~~~~k~y~~~~~~ 70 (74)
.|.|..-...+-+..+|+|. +.+..++. ... + ++++.+.|+.+.....+.. ++++.+=++.+.+
T Consensus 52 ~g~FS~FpGidR~i~lL~G~g~~L~~~~~-~~~-L~~~~~p~~F~G~~~v~a~L~~G~~~DfNlM~rr~ 118 (200)
T 1yll_A 52 SGGFSGFAGYQRIISVLEGGGMRLRVDGA-ESA-PLRARQAFAFSGDSEVHCTLLDGAIRDFNLIYAPR 118 (200)
T ss_dssp CEEECCCTTCEEEEEEEESSCEEEEETTE-ECC-CBCBTCCEEEETTSCEEEEESSSCEEEEEEEECTT
T ss_pred CCCCCCCCCccEEEEEEeCCcEEEecCCC-ccc-cCCCCCcEEeCCCCcEEEEECCCCEEEEEEEEcCC
Confidence 34444434578999999998 99998885 344 7 9999999999999988865 5676666665543
No 180
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=89.69 E-value=0.5 Score=34.16 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=43.3
Q ss_pred cCCceE-EEecCc---eEEEEEEecEEEEEeC-----------------------------CCceEEEECCCcEEEEcCC
Q 037642 3 CSPGKF-QLKFDA---EETCYLLKGKVKVYPK-----------------------------GSSDWVEFGAGDLVTIPKG 49 (74)
Q Consensus 3 ~~pg~~-~~~~~~---~E~~~vleG~~~~~~~-----------------------------~g~e~~~~~~GD~v~~p~g 49 (74)
..+|++ .+|.|. .-+..++.|+=...+- .. -...++|||+++||.|
T Consensus 238 G~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~-~~v~l~pGetlfIPsG 316 (447)
T 3kv4_A 238 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKC-YKCSVKQGQTLFIPTG 316 (447)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCC-EEEEEETTCEEEECTT
T ss_pred eCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccce-EEEEECCCcEEecCCC
Confidence 345666 477764 4578899998776541 11 3578999999999999
Q ss_pred CeEEEEEeeeEEEE
Q 037642 50 LSCTWDVSVAVDKY 63 (74)
Q Consensus 50 ~~~~~~~~~~~~k~ 63 (74)
+.|.-...+....+
T Consensus 317 WwH~V~nledsIai 330 (447)
T 3kv4_A 317 WIHAVLTPVDCLAF 330 (447)
T ss_dssp CEEEEEESSCEEEE
T ss_pred CeEEEecCCCEEEE
Confidence 99988877765433
No 181
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=89.64 E-value=0.26 Score=33.65 Aligned_cols=21 Identities=19% Similarity=0.113 Sum_probs=18.5
Q ss_pred EEEECCCcEEEEcCCCeEEEE
Q 037642 35 WVEFGAGDLVTIPKGLSCTWD 55 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~~ 55 (74)
.+.++|||++++|+|..|..-
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 159 TFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp EEECCTTCEEEECTTCCEEEE
T ss_pred eeECCCCCEEEcCCCCceEcC
Confidence 578999999999999998753
No 182
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=89.45 E-value=1.3 Score=25.07 Aligned_cols=63 Identities=17% Similarity=0.294 Sum_probs=36.7
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEe--CCCce-----EEEECCCcEEEEc---CCC--eEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYP--KGSSD-----WVEFGAGDLVTIP---KGL--SCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e-----~~~~~~GD~v~~p---~g~--~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+.. .+|.+ ...+.+||++-.. .+. ..+..+.+++ .++.+.
T Consensus 35 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~a~~~~-~~~~i~ 111 (142)
T 3mdp_A 35 PTGSVIFKENSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKPV-RVVDIN 111 (142)
T ss_dssp CTTCEEECTTSBCCEEEEEEESCEEEECC---------CEEEEECTTCEECGGGSSTTCBCSSEEEESSCE-EEEEEE
T ss_pred CCCCEEEeCCCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEechHHHcCCCCceEEEEECCcE-EEEEEe
Confidence 345444433 35889999999999975 33322 3458999988432 222 3366666665 455554
No 183
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=89.41 E-value=0.66 Score=33.14 Aligned_cols=59 Identities=14% Similarity=0.101 Sum_probs=41.5
Q ss_pred CCceE-EEecCc---eEEEEEEecEEEEEeC-----------------------------CCceEEEECCCcEEEEcCCC
Q 037642 4 SPGKF-QLKFDA---EETCYLLKGKVKVYPK-----------------------------GSSDWVEFGAGDLVTIPKGL 50 (74)
Q Consensus 4 ~pg~~-~~~~~~---~E~~~vleG~~~~~~~-----------------------------~g~e~~~~~~GD~v~~p~g~ 50 (74)
..|++ .+|.|. .-+..++.|+=...+- .. -...++|||+++||.|+
T Consensus 183 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~-~~v~l~pGe~lfIPsGW 261 (397)
T 3kv9_A 183 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKC-YKCVVKQGHTLFVPTGW 261 (397)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCC-EEEEEETTCEEEECTTC
T ss_pred CCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCce-EEEEECCCCEEEeCCCC
Confidence 45666 467663 4577888887665531 12 34789999999999999
Q ss_pred eEEEEEeeeEEEE
Q 037642 51 SCTWDVSVAVDKY 63 (74)
Q Consensus 51 ~~~~~~~~~~~k~ 63 (74)
.|.-...+....+
T Consensus 262 ~H~V~nledSIai 274 (397)
T 3kv9_A 262 IHAVLTSQDCMAF 274 (397)
T ss_dssp EEEEEEEEEEEEE
T ss_pred eEEccCCcCeEEE
Confidence 9988877765443
No 184
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=89.33 E-value=1.9 Score=29.03 Aligned_cols=45 Identities=16% Similarity=0.341 Sum_probs=38.5
Q ss_pred ecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEE
Q 037642 11 KFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDV 56 (74)
Q Consensus 11 ~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~ 56 (74)
|.+.+-+-|+++|.+.=.+.-|+ ...++|||+-.+-+|.-....-
T Consensus 57 Hrg~EtVTyvl~G~~~H~DS~Gn-~~~i~~GdvQwMtAG~GI~HsE 101 (277)
T 2p17_A 57 HRGIETVTYVISGELEHFDSKAG-HSTLGPGDVQWMTAGRGVVHKE 101 (277)
T ss_dssp ECSEEEEEEEEESCEEEEETTTE-EEEECTTCEEEEECTTCEEEEE
T ss_pred CCCcEEEEEEEEeEEEEeeCCCC-ceEECCCeEEEEeCCCCEEEEe
Confidence 45667799999999999999884 7999999999999998776653
No 185
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=89.24 E-value=0.28 Score=33.63 Aligned_cols=20 Identities=20% Similarity=0.431 Sum_probs=18.3
Q ss_pred EEEECCCcEEEEcCCCeEEE
Q 037642 35 WVEFGAGDLVTIPKGLSCTW 54 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~ 54 (74)
.+.++|||+++||+|..|..
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~ 178 (319)
T 1qwr_A 159 RIKIKPGDFYYVPSGTLHAL 178 (319)
T ss_dssp EEECCTTCEEEECTTCCEEE
T ss_pred EEEcCCCCEEEcCCCCceEe
Confidence 68999999999999999874
No 186
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=89.24 E-value=3.4 Score=27.28 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=42.2
Q ss_pred EEEecC---ceEEEEEEecEE-EEEeCCCc--------eEEEECC--CcEEEEcCCCeEEEEEeee-EEEEEEEe
Q 037642 8 FQLKFD---AEETCYLLKGKV-KVYPKGSS--------DWVEFGA--GDLVTIPKGLSCTWDVSVA-VDKYYKFE 67 (74)
Q Consensus 8 ~~~~~~---~~E~~~vleG~~-~~~~~~g~--------e~~~~~~--GD~v~~p~g~~~~~~~~~~-~~k~y~~~ 67 (74)
++++.. ...++.|++|++ .+.+|... ..+.|.+ +..++||+|..|.+.+.+. ..-.|.++
T Consensus 81 lH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a~vly~~s 155 (225)
T 1upi_A 81 LHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCS 155 (225)
T ss_dssp EEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSEEEEEEES
T ss_pred eeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCEEEEEecC
Confidence 455643 789999999996 45554431 2355665 5899999999999998876 44455543
No 187
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=88.08 E-value=2.3 Score=27.32 Aligned_cols=53 Identities=13% Similarity=-0.046 Sum_probs=36.1
Q ss_pred CCceE---EEecCceEEEEEEecEEEEEe----CCC------ceEEEECCCcEEEE-cCCCeEEEEE
Q 037642 4 SPGKF---QLKFDAEETCYLLKGKVKVYP----KGS------SDWVEFGAGDLVTI-PKGLSCTWDV 56 (74)
Q Consensus 4 ~pg~~---~~~~~~~E~~~vleG~~~~~~----~~g------~e~~~~~~GD~v~~-p~g~~~~~~~ 56 (74)
.||.. +-|.+...++.||+|..+-+. +++ .....+.+||...| |++.-|.-..
T Consensus 78 ~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N 144 (200)
T 3eln_A 78 GEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVEN 144 (200)
T ss_dssp CTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEEC
T ss_pred CCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEEC
Confidence 45654 223346899999999998774 221 12578999999999 7666555443
No 188
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=88.04 E-value=1.2 Score=27.65 Aligned_cols=53 Identities=17% Similarity=0.103 Sum_probs=35.7
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEE----E-cCCCeEEEEEeeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVT----I-PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~----~-p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+.+++|++|.+.+...+.+....+.+||.|- + ..-...+..+.+++ .++.+.
T Consensus 166 ~~~~y~I~~G~v~v~~~~~~~~~~l~~g~~fGe~~~~~~~~~~~~v~a~~~~-~~~~i~ 223 (246)
T 3of1_A 166 GENFYLIEYGAVDVSKKGQGVINKLKDHDYFGEVALLNDLPRQATVTATKRT-KVATLG 223 (246)
T ss_dssp CCEEEEEEECEEEEEETTTEEEEEEETTCEECHHHHHHTCBCSSEEEESSCE-EEEEEE
T ss_pred CCEEEEEEecEEEEEEcCCceEEEcCCCCcccHHHHhCCCCcccEEEECCCE-EEEEEe
Confidence 58899999999999988753357799999873 1 22223445555554 555554
No 189
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=87.94 E-value=1.2 Score=28.78 Aligned_cols=52 Identities=21% Similarity=0.275 Sum_probs=35.3
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+.+++|++|.+.+..++. ....+.+||.+-- ..-...+....+++ .++.+.
T Consensus 80 ~~~~yiI~~G~v~v~~~g~-~~~~~~~G~~fGe~~ll~~~~~~~tv~a~~~~-~l~~i~ 136 (299)
T 3shr_A 80 GSLVYVMEDGKVEVTKEGV-KLCTMGPGKVFGELAILYNCTRTATVKTLVNV-KLWAID 136 (299)
T ss_dssp CCCEEEEEESCEEEEETTE-EEEEECTTCEESCSGGGTTTBCCSEEEESSCE-EEEEEC
T ss_pred CceEEEEEEEEEEEEECCE-EEEEeCCCCeeeHhHHhcCCCCCcEEEEcCCe-EEEEEc
Confidence 5789999999999988875 5688999998741 11123355555554 444443
No 190
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=87.53 E-value=1.2 Score=25.23 Aligned_cols=60 Identities=18% Similarity=0.315 Sum_probs=39.0
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeCCCceEEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+...+ + ..+.+||++-. ..-...+..+.+++ .+|.+.
T Consensus 40 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~--~-~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~-~~~~i~ 106 (138)
T 1vp6_A 40 PAGAVICRIGEPGDRMFFVVEGSVSVATPN--P-VELGPGAFFGEMALISGEPRSATVSAATTV-SLLSLH 106 (138)
T ss_dssp CTTCEEECTTSCCCEEEEEEESCEEECSSS--C-EEECTTCEECHHHHHHCCCCSSCEEESSSE-EEEEEE
T ss_pred CCCCEEEeCCCCcceEEEEEeeEEEEEeCC--c-ceECCCCEeeehHhccCCCceeEEEECCCE-EEEEEC
Confidence 345444433 3578999999999998776 2 68999998732 12234556666665 555554
No 191
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=87.40 E-value=1 Score=33.38 Aligned_cols=59 Identities=22% Similarity=0.279 Sum_probs=40.3
Q ss_pred CCceE-EEecCc---eEEEEEEecEEEEEe----------------------------CCCceEEEECCCcEEEEcCCCe
Q 037642 4 SPGKF-QLKFDA---EETCYLLKGKVKVYP----------------------------KGSSDWVEFGAGDLVTIPKGLS 51 (74)
Q Consensus 4 ~pg~~-~~~~~~---~E~~~vleG~~~~~~----------------------------~~g~e~~~~~~GD~v~~p~g~~ 51 (74)
..|+| .+|.|. .-++.++.|+=.+.+ ++.-....++|||+++||.|+-
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 34555 467663 457888888765542 1111247899999999999999
Q ss_pred EEEEEeeeEEE
Q 037642 52 CTWDVSVAVDK 62 (74)
Q Consensus 52 ~~~~~~~~~~k 62 (74)
|.--..+....
T Consensus 384 HaV~tleDSIa 394 (528)
T 3pur_A 384 HAVLTPVDSLV 394 (528)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEecCCCeEE
Confidence 88777766533
No 192
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=87.28 E-value=0.53 Score=33.30 Aligned_cols=21 Identities=10% Similarity=0.137 Sum_probs=18.7
Q ss_pred EEEECCCcEEEEcCCCeEEEE
Q 037642 35 WVEFGAGDLVTIPKGLSCTWD 55 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~~ 55 (74)
.+.++|||++++|+|..|..-
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEE
T ss_pred EEECCCCCEEEcCCCCceEcC
Confidence 578999999999999999854
No 193
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=87.13 E-value=3.7 Score=25.23 Aligned_cols=51 Identities=12% Similarity=0.246 Sum_probs=34.6
Q ss_pred ceEEEEEEecEEEEEe-CCCceE--EEECCCcEEEEcCCCeEEEEEeeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYP-KGSSDW--VEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~-~~g~e~--~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+.+++|++|.+.+.. .+|.+. ..+.|||++- .-...+..+.+++ .++.+.
T Consensus 41 ~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~~~~-~v~~i~ 94 (222)
T 1ft9_A 41 ENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFC--MHSGCLVEATERT-EVRFAD 94 (222)
T ss_dssp CCCEEEEEESEEEEEEEETTEEEEEEEEETTCEEE--SCSSCEEEESSCE-EEEEEC
T ss_pred CCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEec--CCCCEEEEEccce-EEEEEe
Confidence 5789999999999852 344222 3578999988 4456666667775 445544
No 194
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=85.90 E-value=3.4 Score=24.68 Aligned_cols=62 Identities=6% Similarity=-0.024 Sum_probs=38.1
Q ss_pred CceEEEec--CceEEEEEEecEEEEEe--CCCceE--EEECCCcEEE-E----c-CCCeEEEEEeeeEEEEEEEe
Q 037642 5 PGKFQLKF--DAEETCYLLKGKVKVYP--KGSSDW--VEFGAGDLVT-I----P-KGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 5 pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e~--~~~~~GD~v~-~----p-~g~~~~~~~~~~~~k~y~~~ 67 (74)
+|..-+.. ..+.+++|++|.+.+.. ++|.+. ..+.|||++- + . .-...+....+++ .++.+.
T Consensus 37 ~g~~l~~~G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~-~v~~i~ 110 (194)
T 3dn7_A 37 KKETLLKTGEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENC-ELLSIT 110 (194)
T ss_dssp TTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCE-EEEEEE
T ss_pred CCCEEECCCCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCE-EEEEEe
Confidence 44444433 25889999999999874 455332 2378999985 3 1 2234566666665 445544
No 195
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=85.74 E-value=1.3 Score=34.00 Aligned_cols=43 Identities=19% Similarity=0.175 Sum_probs=31.1
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEE---EcCCCeEEEEE
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVT---IPKGLSCTWDV 56 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~---~p~g~~~~~~~ 56 (74)
.+.+++|++|++.|..++......+++||.|= +-.+.+..+.+
T Consensus 379 gds~YIIlsG~V~V~~~~~~~v~~L~~Gd~FGElALL~~~PR~aTV 424 (999)
T 4f7z_A 379 GTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASI 424 (999)
T ss_dssp CCEEEEEEESEEEEEETTTEEEEEEETTCEECGGGGTCSCBCSSEE
T ss_pred CCeEEEEEeeEEEEEEcCCcceEEecCCCcccchhhccCCCeeEEE
Confidence 48899999999999887653567899999983 33444444443
No 196
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=85.69 E-value=2.6 Score=29.01 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=30.0
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeCCCceEEEECCCcEE
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLV 44 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v 44 (74)
.+|..-+.. ..+.+++|++|.+.+...+......+.+||.|
T Consensus 367 ~~g~~i~~~G~~~~~~yiI~~G~v~v~~~~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 367 KGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDF 409 (469)
T ss_dssp STTCEEECTTSCCCEEEEEEESEEEEEETTTEEEEEEETTCEE
T ss_pred cCCCEEEeCCCcCCeEEEEEEeEEEEEEcCCeeEEEecCCCEE
Confidence 345444433 35899999999999988764345789999987
No 197
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=85.14 E-value=5.9 Score=25.72 Aligned_cols=60 Identities=13% Similarity=0.064 Sum_probs=42.4
Q ss_pred EEec---CceEEEEEEecEEEEE-eCC--Cc------eEEEECC--CcEEEEcCCCeEEEEEeee-EEEEEEEec
Q 037642 9 QLKF---DAEETCYLLKGKVKVY-PKG--SS------DWVEFGA--GDLVTIPKGLSCTWDVSVA-VDKYYKFES 68 (74)
Q Consensus 9 ~~~~---~~~E~~~vleG~~~~~-~~~--g~------e~~~~~~--GD~v~~p~g~~~~~~~~~~-~~k~y~~~~ 68 (74)
+++. .+..++.|+.|++.-. +|- ++ ..+.|.+ +-.++||+|.-|-+.+.++ ..-.|.+..
T Consensus 60 H~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~~t~ 134 (201)
T 4hn1_A 60 NYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFLCSS 134 (201)
T ss_dssp EEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEEESS
T ss_pred EecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEeCCC
Confidence 4554 5799999999996443 332 11 2355665 8899999999999999876 555677643
No 198
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=84.32 E-value=5.1 Score=24.30 Aligned_cols=63 Identities=10% Similarity=0.131 Sum_probs=38.9
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEe--CCCceE--EEECCCcEEEE-------cCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYP--KGSSDW--VEFGAGDLVTI-------PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e~--~~~~~GD~v~~-------p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+.. ++|.+. ..+.|||++.| ..-...+....+++ .++.+.
T Consensus 32 ~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~~~~-~~~~i~ 107 (220)
T 3dv8_A 32 KKGTIIHNGNMDCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDT-DLWIIP 107 (220)
T ss_dssp CTTCEEEEGGGCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEESSCE-EEEEEE
T ss_pred CCCCEEECCCCCcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEeeee-EEEEEE
Confidence 344443432 35889999999999874 444322 45789999632 22345566666676 455554
No 199
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=83.70 E-value=5.6 Score=24.28 Aligned_cols=60 Identities=12% Similarity=0.137 Sum_probs=37.4
Q ss_pred CceEEEec--CceEEEEEEecEEEEEe-CCCceE--EEECCCcEEEEcCCCeEEEEEeeeEEEEEEEe
Q 037642 5 PGKFQLKF--DAEETCYLLKGKVKVYP-KGSSDW--VEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 5 pg~~~~~~--~~~E~~~vleG~~~~~~-~~g~e~--~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
+|..-+.. ..+.+++|++|.+.+.. .+|.+. ..+.|||++-.| ...+....+++ .++.+.
T Consensus 34 ~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~G~~~~~~~~~~G~~~G~~--~~~~~~A~~~~-~v~~i~ 98 (220)
T 2fmy_A 34 KKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCTH--TRAFIQAMEDT-TILYTD 98 (220)
T ss_dssp TTCEEECTTCSSCEEEEEEESEEEEEEECSSCEEEEEEEETTCEEESC--SSSEEEESSSE-EEEEEE
T ss_pred CCCEEECCCCCCCeEEEEEecEEEEEECCCCCEEEEEEcCCCCEeCCc--cceEEEEcCcE-EEEEEe
Confidence 44443432 35789999999999843 444322 357899998763 44455566665 445544
No 200
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=83.65 E-value=1.1 Score=32.18 Aligned_cols=21 Identities=10% Similarity=0.136 Sum_probs=18.8
Q ss_pred EEEECCCcEEEEcCCCeEEEE
Q 037642 35 WVEFGAGDLVTIPKGLSCTWD 55 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~~ 55 (74)
.+.++|||++++|+|..|..-
T Consensus 267 ~v~L~pGea~flpAg~~HAYl 287 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYI 287 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEE
T ss_pred eEecCCCCEEecCCCCccccC
Confidence 478999999999999999765
No 201
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=82.98 E-value=0.89 Score=25.76 Aligned_cols=63 Identities=11% Similarity=0.232 Sum_probs=39.1
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeC-CCceE--E--EECCCcEEE-------EcCC-------CeEEEEEeeeEEE
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPK-GSSDW--V--EFGAGDLVT-------IPKG-------LSCTWDVSVAVDK 62 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~-~g~e~--~--~~~~GD~v~-------~p~g-------~~~~~~~~~~~~k 62 (74)
++|..-+.. ..+.+++|++|.+.+... +|.+. . .+.+||++- +... ...+....+++ .
T Consensus 35 ~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~l~~G~~fGe~~l~~~~~~~~~~~~~~~~~~~~A~~~~-~ 113 (137)
T 1wgp_A 35 TEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEV-E 113 (137)
T ss_dssp CTTEEEECTTSBCSEEEEEEECCCEEECCSSCSSSSSCEEECCTTCBSSTHHHHHHHCSSCCSSSCBCSSEEEESSCB-E
T ss_pred CCCCEEEeCCCCCCeEEEEEeeEEEEEEcCCCcceeeeeeeecCCCEecHHHHHHHhccccccccccceeEEEEeEEE-E
Confidence 455554443 257899999999997743 33221 2 788999873 4333 23566777775 4
Q ss_pred EEEEe
Q 037642 63 YYKFE 67 (74)
Q Consensus 63 ~y~~~ 67 (74)
++.+.
T Consensus 114 ~~~i~ 118 (137)
T 1wgp_A 114 AFALI 118 (137)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 55554
No 202
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=82.44 E-value=5.4 Score=23.93 Aligned_cols=63 Identities=14% Similarity=0.151 Sum_probs=37.7
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEEc----CC-----CeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTIP----KG-----LSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~p----~g-----~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+.. .+|.+ ...+.|||++-.. .. ...+....+++ .++.+.
T Consensus 19 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~A~~~~-~v~~i~ 96 (207)
T 2oz6_A 19 TAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVEC-EVAEIS 96 (207)
T ss_dssp CTTCEEECTTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEESCTTTCC-----CBCCSEEEESSCE-EEEEEE
T ss_pred CCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcccHHHhcCCCCCCCcceEEEECCcE-EEEEEC
Confidence 345544443 25789999999999874 34432 2357899988322 22 44556666665 445544
No 203
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=82.38 E-value=3.9 Score=27.70 Aligned_cols=49 Identities=20% Similarity=0.146 Sum_probs=40.0
Q ss_pred eEEEe--cCceEEEEEE-ecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEE
Q 037642 7 KFQLK--FDAEETCYLL-KGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDV 56 (74)
Q Consensus 7 ~~~~~--~~~~E~~~vl-eG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~ 56 (74)
.|..| .+.+-+-|++ +|.+.-.+.-|+ ...++|||+-.+-+|.-....-
T Consensus 52 Gf~~HPHrg~EtVTyvl~~G~~~H~DS~Gn-~~~i~~GdvQwMtAG~GI~HsE 103 (290)
T 1j1l_A 52 GFPDHPHRGFETVSYLLEGGSMAHEDFCGH-TGKMNPGDLQWMTAGRGILHAE 103 (290)
T ss_dssp BEEEEEEBSEEEEEEECSSSCEEEEETTSC-EEEECTTCEEEEECTTCEEEEE
T ss_pred CCCCCCCCCeEEEEEECcceEEEEeeCCCC-ceEECCCcEEEEeCCCCEEEEe
Confidence 36544 5556688999 999999999885 6999999999999998776653
No 204
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=81.95 E-value=3.5 Score=23.42 Aligned_cols=63 Identities=17% Similarity=0.298 Sum_probs=38.1
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeC--CCce--EEEECCCcEEE----EcC-C-CeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPK--GSSD--WVEFGAGDLVT----IPK-G-LSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~--~g~e--~~~~~~GD~v~----~p~-g-~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+... +|.+ ...+.+||++- +.. . ...+..+.+++ .++.+.
T Consensus 41 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~a~~~~-~~~~i~ 115 (154)
T 2z69_A 41 DKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPS-QLFRFS 115 (154)
T ss_dssp CTTCEEECTTSBCCEEEEEEESCEEEECCCC-----CCEEECTTEEESGGGGGSSCSBCSSEEEESSSE-EEEEEE
T ss_pred cCCCEEecCCCccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCeeccHhhccCCCCCceEEEEccce-EEEEEC
Confidence 345444433 357899999999999853 3321 24789999873 222 2 45666777775 555554
No 205
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=81.83 E-value=5.9 Score=26.86 Aligned_cols=37 Identities=22% Similarity=0.287 Sum_probs=25.6
Q ss_pred EEEEE-Ee---cEEEEEe----CCCceEEEECCCcEEEEcCCCeEE
Q 037642 16 ETCYL-LK---GKVKVYP----KGSSDWVEFGAGDLVTIPKGLSCT 53 (74)
Q Consensus 16 E~~~v-le---G~~~~~~----~~g~e~~~~~~GD~v~~p~g~~~~ 53 (74)
|++|. +. |.+.-.+ ....+.+.++-||+|++|+|. |.
T Consensus 186 E~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy-Hp 230 (270)
T 2qjv_A 186 ETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY-HP 230 (270)
T ss_dssp EEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-CC
T ss_pred eEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-CC
Confidence 77754 43 4444333 222367999999999999999 76
No 206
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=81.03 E-value=0.82 Score=26.61 Aligned_cols=18 Identities=22% Similarity=0.523 Sum_probs=13.9
Q ss_pred EEECCCcEEEEcCCCeEE
Q 037642 36 VEFGAGDLVTIPKGLSCT 53 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~ 53 (74)
..+++||.|+|++|..++
T Consensus 57 ~~VkvGD~Vlf~k~y~Gt 74 (97)
T 1pcq_O 57 LDVKVGDIVIFNDGYGVK 74 (97)
T ss_dssp CSCCTTCEEEECCCSSCE
T ss_pred cccCCCCEEEECCccCCe
Confidence 458999999999944443
No 207
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=80.95 E-value=5.4 Score=22.40 Aligned_cols=63 Identities=16% Similarity=0.163 Sum_probs=37.2
Q ss_pred CceEEEecC--ceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEEc-----CCCeEEEEEeeeEEEEEEEec
Q 037642 5 PGKFQLKFD--AEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTIP-----KGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 5 pg~~~~~~~--~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~p-----~g~~~~~~~~~~~~k~y~~~~ 68 (74)
+|..-+..+ .+.+++|++|.+.+.. .+|.+ ...+.+||++-.. .-...+..+.+++ .+|.+..
T Consensus 35 ~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~-~~~~i~~ 108 (149)
T 2pqq_A 35 RGDTLFHEGDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEV-KLLALGH 108 (149)
T ss_dssp TTCEEECTTSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCE-EEEEEEG
T ss_pred CCCEEECCCCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccce-EEEEEeH
Confidence 444434332 4789999999999875 23322 2468899987321 1233455566665 5555554
No 208
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=80.74 E-value=4.8 Score=23.36 Aligned_cols=62 Identities=10% Similarity=0.152 Sum_probs=36.4
Q ss_pred CceEEEec--CceEEEEEEecEEEEEeC-CCce--EEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 5 PGKFQLKF--DAEETCYLLKGKVKVYPK-GSSD--WVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 5 pg~~~~~~--~~~E~~~vleG~~~~~~~-~g~e--~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
+|..-+.. ..+.+++|++|.+.+... +|.+ ...+.+||++-- ..-...+....+++ .++.+.
T Consensus 68 ~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~-~~~~i~ 139 (161)
T 3idb_B 68 EGEHVIDQGDDGDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPG-ALWGLD 139 (161)
T ss_dssp TTCEEECTTSCCCEEEEEEESEEEEEEEETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSSE-EEEEEE
T ss_pred CCCEEEeCCCCCcEEEEEEeCEEEEEEcCCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCCe-EEEEEe
Confidence 44444433 358899999999998752 3312 234889997631 22234455566665 455544
No 209
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=80.56 E-value=7 Score=23.89 Aligned_cols=62 Identities=15% Similarity=0.203 Sum_probs=38.3
Q ss_pred CceEEEec--CceEEEEEEecEEEEEe--CCCceE--EEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 5 PGKFQLKF--DAEETCYLLKGKVKVYP--KGSSDW--VEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 5 pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e~--~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
+|..-+.. ..+.+++|++|.+.+.. .+|.+. ..+.|||++-. ..-...+....+++ .++.+.
T Consensus 36 ~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~-~v~~i~ 108 (227)
T 3d0s_A 36 RGHTVFAEGEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEV-RAVSMD 108 (227)
T ss_dssp TTCEEECTTCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCE-EEEEEE
T ss_pred CCCEEEcCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccE-EEEEEe
Confidence 44443432 35789999999999875 344322 36889998832 23345566666775 555554
No 210
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=80.39 E-value=4.8 Score=24.20 Aligned_cols=64 Identities=16% Similarity=0.043 Sum_probs=38.6
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEE---c-CCCeEEEEEeeeEEEEEEEec
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTI---P-KGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~---p-~g~~~~~~~~~~~~k~y~~~~ 68 (74)
++|..-+.. ..+.+++|++|.+.+.. ++|.+ ...+.|||++-. . .-...+....+++ .++.+..
T Consensus 5 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~-~v~~i~~ 78 (195)
T 3b02_A 5 ARKETIYLRGEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEA-VVQGLEP 78 (195)
T ss_dssp CTTCEEECTTSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSE-EEEEECG
T ss_pred CCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcE-EEEEEcH
Confidence 455554443 35789999999999864 34432 236889998832 1 1234556666665 4555543
No 211
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=80.27 E-value=7.2 Score=23.98 Aligned_cols=62 Identities=13% Similarity=0.156 Sum_probs=37.9
Q ss_pred CceEEEec--CceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 5 PGKFQLKF--DAEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 5 pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
+|..-+.. ..+.+++|++|.+.+.. .+|.+ ...+.|||++-. ..-...+..+.+++ .++.+.
T Consensus 41 ~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~a~~~~-~v~~i~ 113 (237)
T 3fx3_A 41 RGETLFLQEEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESFGEAVALRNTPYPVSAEAVTPC-EVMHIP 113 (237)
T ss_dssp TTCEEECTTSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEECHHHHHHTCCCSSEEEESSSE-EEEEEE
T ss_pred CCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEechHHHhcCCCCCceEEECCce-EEEEEc
Confidence 44443433 35789999999999885 44432 235789998833 22344556666665 445544
No 212
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=80.11 E-value=6.2 Score=23.71 Aligned_cols=62 Identities=19% Similarity=0.246 Sum_probs=38.4
Q ss_pred CceEEEec--CceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEE----cCC--CeEEEEEeeeEEEEEEEe
Q 037642 5 PGKFQLKF--DAEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTI----PKG--LSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 5 pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~----p~g--~~~~~~~~~~~~k~y~~~ 67 (74)
+|..-+.. ..+.+++|++|.+.+.. .+|.+ ...+.|||++-. -.+ ...+..+.+++ .++.+.
T Consensus 26 ~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~-~v~~i~ 99 (210)
T 3ryp_A 26 SKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTAC-EVAEIS 99 (210)
T ss_dssp TTCEEECTTSBCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEESSCE-EEEEEE
T ss_pred CCCEEECCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEECCcE-EEEEEc
Confidence 44443433 25889999999999974 44432 234799999842 222 45566667776 555554
No 213
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=79.83 E-value=8 Score=23.49 Aligned_cols=60 Identities=10% Similarity=-0.064 Sum_probs=42.6
Q ss_pred ceEEEecCceEEEEEEecEEEEEeC-----------------------C-CceEEEECCCcEEEEcCCCeEEEEEe----
Q 037642 6 GKFQLKFDAEETCYLLKGKVKVYPK-----------------------G-SSDWVEFGAGDLVTIPKGLSCTWDVS---- 57 (74)
Q Consensus 6 g~~~~~~~~~E~~~vleG~~~~~~~-----------------------~-g~e~~~~~~GD~v~~p~g~~~~~~~~---- 57 (74)
..|..|..+--+.++|+|+=.+... + ....+.++||++++|-++..|.-.+.
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~~~~~~ 139 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCCVVNGK 139 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEEC----
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCcccccccccCCC
Confidence 3567788888899999995544321 1 11347889999999999998887664
Q ss_pred -eeEEEEEE
Q 037642 58 -VAVDKYYK 65 (74)
Q Consensus 58 -~~~~k~y~ 65 (74)
+++||.=+
T Consensus 140 ~~~irKvVv 148 (155)
T 1s4c_A 140 TEKIKKLVV 148 (155)
T ss_dssp -CBCEEEEE
T ss_pred CCcEEEEEE
Confidence 36777644
No 214
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=79.23 E-value=8.2 Score=23.26 Aligned_cols=63 Identities=16% Similarity=0.173 Sum_probs=38.6
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
++|..-+.. ..+.+++|++|.+.+.. .+|.+ ...+.|||++-. ..-...+..+.+++ .++.+.
T Consensus 28 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~-~v~~i~ 101 (216)
T 4ev0_A 28 PQGKPIFYQGDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDT-ELLALF 101 (216)
T ss_dssp CTTCEEECTTCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSE-EEEEEE
T ss_pred CCCCEEEeCCCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCE-EEEEEc
Confidence 344443433 25889999999999875 34422 245899998842 22234566666665 455554
No 215
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=79.09 E-value=4.6 Score=25.07 Aligned_cols=53 Identities=17% Similarity=0.275 Sum_probs=34.6
Q ss_pred ceEEEEEEecEEEEEe--CCCceE--EEECCCcEEE----EcCC--CeEEEEEeeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYP--KGSSDW--VEFGAGDLVT----IPKG--LSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~--~~g~e~--~~~~~GD~v~----~p~g--~~~~~~~~~~~~k~y~~~ 67 (74)
.+.+++|++|.+.+.. ++|.+. ..+.|||++- +... ...+..+.+++ .++.+.
T Consensus 61 ~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~~~~-~v~~i~ 123 (232)
T 1zyb_A 61 CTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAHTEV-HTVCIS 123 (232)
T ss_dssp CCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEESSCE-EEEEEE
T ss_pred ccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEEccce-EEEEEE
Confidence 5789999999999864 333222 3578999873 2222 45667777776 555554
No 216
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=78.85 E-value=7.9 Score=23.58 Aligned_cols=63 Identities=13% Similarity=0.202 Sum_probs=38.3
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEE----cCC--CeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTI----PKG--LSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~----p~g--~~~~~~~~~~~~k~y~~~ 67 (74)
++|..-+.. ..+.+++|++|.+.+.. .+|.+ ...+.|||++-. -.+ ...+....+++ .++.+.
T Consensus 40 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~-~v~~i~ 114 (230)
T 3iwz_A 40 PTRTDVFRPGDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVGEMGLFIESDTREVILRTRTQC-ELAEIS 114 (230)
T ss_dssp CTTCEEECTTSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCGGGTSCCSBCCSEEEESSCE-EEEEEE
T ss_pred CCCCEEECCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEEehhhhcCCCCceeEEEEcCcE-EEEEEe
Confidence 344443433 25889999999999874 34432 234899999842 222 34556666665 455544
No 217
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=78.67 E-value=5.9 Score=25.71 Aligned_cols=42 Identities=12% Similarity=0.102 Sum_probs=31.9
Q ss_pred ceEEEEEEecEEEEEe----CCCc-----eEEEECCCcEEEEcCC--CeEEEE
Q 037642 14 AEETCYLLKGKVKVYP----KGSS-----DWVEFGAGDLVTIPKG--LSCTWD 55 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~----~~g~-----e~~~~~~GD~v~~p~g--~~~~~~ 55 (74)
...++.||+|..+-+. +++. +...+.+||...|+++ .-|+-.
T Consensus 93 swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~ 145 (211)
T 3uss_A 93 VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVS 145 (211)
T ss_dssp SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEE
T ss_pred eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEc
Confidence 6889999999998754 3431 2478999999999987 566655
No 218
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=78.50 E-value=13 Score=25.04 Aligned_cols=46 Identities=17% Similarity=0.220 Sum_probs=33.0
Q ss_pred EEEecCceEEEEEEec-------------------EEEEEeCCCceEEEECCCcEEEEcCCCeEEEE
Q 037642 8 FQLKFDAEETCYLLKG-------------------KVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWD 55 (74)
Q Consensus 8 ~~~~~~~~E~~~vleG-------------------~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~ 55 (74)
.++|..-.|-+...-| .+.+..+| ...++.||..+.+.+|.+.+..
T Consensus 121 ~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG--~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 121 MHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDG--CRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETT--EEEEECTTCEEEECTTCEEEEC
T ss_pred cccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCC--eEEEeCCCCEEEECCCCeEecC
Confidence 3566666677766666 44455555 4689999999999999998765
No 219
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=77.80 E-value=8.3 Score=24.44 Aligned_cols=63 Identities=17% Similarity=0.205 Sum_probs=38.6
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEE----cC--CCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTI----PK--GLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~----p~--g~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+.. .+|.+ ...+.|||++-. -. -...+..+.+++ .++.+.
T Consensus 75 ~~ge~i~~~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~-~l~~i~ 149 (260)
T 3kcc_A 75 PSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTAC-EVAEIS 149 (260)
T ss_dssp CTTCEEECTTCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCE-EEEEEE
T ss_pred CCCCEEECCCCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCe-EEEEEc
Confidence 344443433 25789999999999884 44432 245789999832 22 244566667775 455554
No 220
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=77.20 E-value=8.7 Score=23.51 Aligned_cols=63 Identities=14% Similarity=0.060 Sum_probs=37.7
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeC--CCce--EEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPK--GSSD--WVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~--~g~e--~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+... +|.+ ...+.|||++-. ..-...+....+++ .++.+.
T Consensus 39 ~~g~~i~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~-~v~~i~ 112 (232)
T 2gau_A 39 KKASTVFSEGDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENS-KVLAIP 112 (232)
T ss_dssp CTTCEEECTTCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESHHHHHHTSCCSSEEEESSCE-EEEEEE
T ss_pred CCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeeeehhhCCCCcceEEEEecce-EEEEEE
Confidence 345444433 357899999999998842 2322 246899998732 22345566666665 455554
No 221
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=77.00 E-value=14 Score=24.88 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=28.8
Q ss_pred CceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEE
Q 037642 13 DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWD 55 (74)
Q Consensus 13 ~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~ 55 (74)
...-+.||++|.+.+..... ...+.++.++++.+|...+..
T Consensus 189 ~~~~~lyv~~G~v~v~g~~~--~~~~~~~~~~~l~~gd~~~i~ 229 (290)
T 1j1l_A 189 GWTSFIYTISGDVYIGPDDA--QQKIEPHHTAVLGEGDSVQVE 229 (290)
T ss_dssp TCEEEEEEEESCEEESCTTS--CEEECTTEEEEECSCSEEEEE
T ss_pred CCEEEEEEEeCeEEECCccc--ceeccCceEEEecCCCEEEEE
Confidence 35789999999998733221 246777888888777766655
No 222
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=76.31 E-value=6.1 Score=23.83 Aligned_cols=63 Identities=16% Similarity=0.140 Sum_probs=38.1
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+.. .+|.+ ...+.|||++-- ..-...+..+.+++ .++.+.
T Consensus 68 ~~ge~i~~~G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~fGe~~~l~~~~~~~~v~A~~~~-~v~~i~ 141 (187)
T 3gyd_A 68 PRDCQLLTEGDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAIIGEMSMIDGMPRSASCVASLPT-DFAVLS 141 (187)
T ss_dssp CTTCEEECTTSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEESHHHHHHCCCCSSEEEEEEEE-EEEEEE
T ss_pred CCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCeeeeHHHhCCCCeeEEEEECCCe-EEEEEc
Confidence 344443433 35889999999998875 34422 246899998731 33344556666665 455554
No 223
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=75.29 E-value=8 Score=24.57 Aligned_cols=54 Identities=17% Similarity=0.207 Sum_probs=34.7
Q ss_pred ceEEEEEEecEEEEEe--CCC-c--eEEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEec
Q 037642 14 AEETCYLLKGKVKVYP--KGS-S--DWVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~--~~g-~--e~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~~ 68 (74)
.+.+++|++|.+.+.. .++ . ....+.+||+|=- ..-...+..+.+++ .+|.+.+
T Consensus 198 ~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~-~~~~i~~ 261 (291)
T 2qcs_B 198 GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYFGEIALLMNRPKAATVVARGPL-KCVKLDR 261 (291)
T ss_dssp CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEECSGGGTCCCCCSSEEEEEEEE-EEEEEEH
T ss_pred CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEecHHHHcCCCCcceEEEECCcE-EEEEEcH
Confidence 5789999999999974 222 1 2457999999832 12234555666665 5666553
No 224
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=74.21 E-value=9 Score=23.34 Aligned_cols=62 Identities=13% Similarity=0.147 Sum_probs=37.9
Q ss_pred CceEEEec--CceEEEEEEecEEEEEe--CCCceE--EEECCCcEEE----EcC--CCeEEEEEeeeEEEEEEEe
Q 037642 5 PGKFQLKF--DAEETCYLLKGKVKVYP--KGSSDW--VEFGAGDLVT----IPK--GLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 5 pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e~--~~~~~GD~v~----~p~--g~~~~~~~~~~~~k~y~~~ 67 (74)
+|..-+.. ..+.+++|++|.+.+.. .+|.+. ..+.|||++- +-. -...+....+++ .++.+.
T Consensus 29 ~g~~i~~~G~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~~A~~~~-~v~~i~ 102 (213)
T 1o5l_A 29 KGEIVKHQDDPIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQIIASGFIFSSEPRFPVNVVAGENS-KILSIP 102 (213)
T ss_dssp TTCEEECTTCBCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEESSGGGTTSSSCBCSSEEEESSSE-EEEEEE
T ss_pred CCCEEEcCCCccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEeeeHHHhcCCCCceEEEEEccce-EEEEEe
Confidence 44443433 24789999999998874 444332 3588999873 222 345666677776 445544
No 225
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=73.05 E-value=13 Score=23.12 Aligned_cols=62 Identities=16% Similarity=0.104 Sum_probs=37.4
Q ss_pred CceEEEec--CceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEE----cCC---CeEEEEEeeeEEEEEEEe
Q 037642 5 PGKFQLKF--DAEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTI----PKG---LSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 5 pg~~~~~~--~~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~----p~g---~~~~~~~~~~~~k~y~~~ 67 (74)
+|..-+.. ..+.+++|++|.+.+.. .+|.+ ...+.|||++-. ... ...+....+++ .++.+.
T Consensus 50 ~ge~i~~~G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~~~~-~v~~i~ 124 (243)
T 3la7_A 50 RNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPV-ELLSAP 124 (243)
T ss_dssp TTCEEECTTSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEESCHHHHSSCCSBCCEEEEESSSE-EEEEEE
T ss_pred CCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEcchHHhCCCCCcceEEEEEccce-EEEEEc
Confidence 44443433 25789999999999874 44432 234899998733 111 22566666676 455554
No 226
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=72.99 E-value=1.7 Score=29.68 Aligned_cols=52 Identities=17% Similarity=0.250 Sum_probs=35.0
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEEE----E-cCCCeEEEEEeeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLVT----I-PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~----~-p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+.+++|++|.+.+..++. ....+.+||.|- + ..-...+....+++ .++.+.
T Consensus 171 ~~~~yiI~~G~v~v~~~~~-~v~~l~~G~~fGe~all~~~~r~atv~A~~~~-~l~~i~ 227 (381)
T 4din_B 171 GDNFYVVDQGEVDVYVNGE-WVTNISEGGSFGELALIYGTPRAATVKAKTDL-KLWGID 227 (381)
T ss_dssp CCEEEECSSSEEEEEETTE-EEEEEESSCCBCGGGGTSCCBCSSEEEESSSC-EEEEEE
T ss_pred CCeEEEEEeeEEEEEECCe-EeeeCCCCCEEEchHHhcCCCcceEEEECCCE-EEEEEc
Confidence 5789999999999998775 567799999873 1 11123455555554 445444
No 227
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=72.90 E-value=7.2 Score=25.01 Aligned_cols=53 Identities=19% Similarity=0.157 Sum_probs=32.5
Q ss_pred ceEEEEEEecEEEEEeCC---Cc--eEEEECCCcEEE----Ec-CCCeEEEEEeeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYPKG---SS--DWVEFGAGDLVT----IP-KGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~---g~--e~~~~~~GD~v~----~p-~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+.+++|++|.+.+...+ |. ....+.+||.|- +. .-...+..+.+++ .+|.+.
T Consensus 198 ~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~-~l~~i~ 260 (299)
T 3shr_A 198 GDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAV-TCLVID 260 (299)
T ss_dssp ECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSE-EEEEEE
T ss_pred CCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCE-EEEEEe
Confidence 478999999999998654 32 124689999883 21 1123344455554 445544
No 228
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=71.94 E-value=21 Score=24.53 Aligned_cols=49 Identities=14% Similarity=0.081 Sum_probs=34.7
Q ss_pred EEecCceEEEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEE--------EEEeeeEEEEEEEecCC
Q 037642 9 QLKFDAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCT--------WDVSVAVDKYYKFESTS 70 (74)
Q Consensus 9 ~~~~~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~--------~~~~~~~~k~y~~~~~~ 70 (74)
.+.++..|=.|+|+|.+ .+|+-++-|+|..|- |.+.+.+..+-.+++..
T Consensus 233 v~iHdy~EEvY~LeG~~-------------d~G~Y~~RPpg~~HGps~~~~ppf~Se~G~l~fvR~DgdL 289 (303)
T 2qdr_A 233 QMIQPYNEEGYCLTGYC-------------DVGDYRIVKDHYWYCPSFSTLPRHITDDGGLFFVRVDRDL 289 (303)
T ss_dssp EEEECSCEEEEEEEEEE-------------EETTEEEETTEEEEECTTEEECCEEESSCEEEEEEESSCT
T ss_pred ceeeccceeEEEEeeec-------------cCceeeEcCCCCccCccccCCCCcCcCCceEEEEEeCccc
Confidence 35577889999999988 237778888888876 77766665554454433
No 229
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=71.03 E-value=6.2 Score=23.79 Aligned_cols=51 Identities=10% Similarity=0.106 Sum_probs=32.9
Q ss_pred eEEEEEEecEEEEEe--CCCceE--EEECCCcEEEE----cCCCeEEEEEeeeEEEEEEE
Q 037642 15 EETCYLLKGKVKVYP--KGSSDW--VEFGAGDLVTI----PKGLSCTWDVSVAVDKYYKF 66 (74)
Q Consensus 15 ~E~~~vleG~~~~~~--~~g~e~--~~~~~GD~v~~----p~g~~~~~~~~~~~~k~y~~ 66 (74)
+.+++|++|.+.+.. ++|.+. ..+.|||++-. ......+....+++ .++.+
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~-~v~~i 84 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDV-RLEPL 84 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCE-EEEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccE-EEEEE
Confidence 678999999999864 344332 34889998742 23345566666666 34444
No 230
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=70.96 E-value=16 Score=26.09 Aligned_cols=46 Identities=13% Similarity=0.120 Sum_probs=36.7
Q ss_pred EEEEecEEEEEeC--CCceEEEECCCcEEEEcCCCeEEEEEeeeEEEE
Q 037642 18 CYLLKGKVKVYPK--GSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKY 63 (74)
Q Consensus 18 ~~vleG~~~~~~~--~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~ 63 (74)
+.|++|..++.=+ +|.....++|+|...+.+=..|.|.=.+.+.|+
T Consensus 358 Y~v~~G~lTL~W~~~dGt~~a~L~PDgSAwv~PFV~H~w~G~GtVlkL 405 (443)
T 3g7d_A 358 YVVTEGRLTLEWDGPDGPASVELEPDGSAWTGPFVRHRWHGTGTVLKF 405 (443)
T ss_dssp EEEEESCEEEEEEETTEEEEEEECTTCEEEECTTCCEEEESSEEEEEE
T ss_pred EEEecCceEEEecCCCCccceEECCCCceeecccccccccCCceEEEe
Confidence 4488998888753 433567899999999999999999977777664
No 231
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=70.65 E-value=9.7 Score=24.82 Aligned_cols=63 Identities=14% Similarity=0.052 Sum_probs=37.1
Q ss_pred CCceEEEecC--ceEEEEEEecEEEEEe--CCCc-eEEEECCCcEEE----E-cCCCeEEEEEeeeEEEEEEEe
Q 037642 4 SPGKFQLKFD--AEETCYLLKGKVKVYP--KGSS-DWVEFGAGDLVT----I-PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~~--~~E~~~vleG~~~~~~--~~g~-e~~~~~~GD~v~----~-p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+|..-+... .+.+++|++|.+.+.. .+|. ....+.+||++- + ..-...+....+++ .++.+.
T Consensus 42 ~~g~~i~~~G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~~~-~~~~i~ 114 (333)
T 4ava_A 42 AAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPL-TGWTGG 114 (333)
T ss_dssp CTTCEEECTTSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHHHHHTCBCSSEEEESSCE-EEEEEC
T ss_pred CCCCEEEeCCCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHHhcCCCCceEEEEEecCE-EEEEEc
Confidence 3444444432 4789999999999875 3332 235689999872 2 12233455556665 455543
No 232
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=69.77 E-value=14 Score=27.74 Aligned_cols=63 Identities=14% Similarity=0.168 Sum_probs=38.7
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeCCCceEEEECCCcEEEE-----cCCCeEEEEEee-eEEEEEEEe
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI-----PKGLSCTWDVSV-AVDKYYKFE 67 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~-----p~g~~~~~~~~~-~~~k~y~~~ 67 (74)
.+|..-+.. ..+.+++|++|.+.+...+......+.+||+|-- ..-...+..+.+ ++ .++.+.
T Consensus 62 ~kGe~I~~eGd~~~~lyiIlsG~V~v~~~g~~il~~l~~Gd~fGe~al~~~~~~~~tv~A~edd~-~ll~I~ 132 (694)
T 3cf6_E 62 KGGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNC-HFLRVD 132 (694)
T ss_dssp STTCEEECTTSBCCEEEEEEESEEEEEETTTEEEEEEETTCEECHHHHHHTCBCSSEEEECSSSE-EEEEEE
T ss_pred CCCCEEECCCCcCCeEEEEEEEEEEEEEeCCEEEEEeCCCCEeehHHHhCCCCceEEEEEeeCce-EEEEEe
Confidence 455544443 2588999999999998876423467899997732 122344555555 34 444443
No 233
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=69.43 E-value=10 Score=23.53 Aligned_cols=54 Identities=15% Similarity=0.222 Sum_probs=32.9
Q ss_pred ceEEEEEEecEEEEEe--CCCceE-EEECCCcEEEEc----CCC---eEEEEEe-eeEEEEEEEec
Q 037642 14 AEETCYLLKGKVKVYP--KGSSDW-VEFGAGDLVTIP----KGL---SCTWDVS-VAVDKYYKFES 68 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~--~~g~e~-~~~~~GD~v~~p----~g~---~~~~~~~-~~~~k~y~~~~ 68 (74)
.+.+++|++|.+.+.. .+|.+. ..+-|||++-.. ... ..+..+. +++ .++.+..
T Consensus 36 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~~~~~~~~~~~~~~~~a~~~~~-~v~~i~~ 100 (238)
T 2bgc_A 36 QEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQA-TAYVIKI 100 (238)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEESBCTTTCCBSCCCEEEECSSEE-EEEEEEH
T ss_pred CceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecchhhhcCCCcCcceeEEEEEcce-EEEEEeH
Confidence 5789999999998874 344322 223399988542 222 4555665 464 5666553
No 234
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=67.97 E-value=2.7 Score=24.27 Aligned_cols=32 Identities=31% Similarity=0.509 Sum_probs=26.8
Q ss_pred EEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEE
Q 037642 35 WVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKF 66 (74)
Q Consensus 35 ~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~ 66 (74)
.+.+++||+|.+ |.|.+..|=+....++-|+-
T Consensus 33 dl~l~~GdlVAVl~k~Dp~Gn~srW~Vdtgg~~GyvP 69 (92)
T 1ug1_A 33 DVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVY 69 (92)
T ss_dssp CCCCCTTCEEEEEESCCTTSCSSEEEEECSSSEEEEE
T ss_pred eeeecCCCEEEEEecCCCCCCCcceEEECCCcEEeeE
Confidence 488999999987 88888899888887777763
No 235
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=67.68 E-value=9.8 Score=23.73 Aligned_cols=53 Identities=19% Similarity=0.248 Sum_probs=34.5
Q ss_pred ceEEEEEEecEEEEEe--CCCceE--EEECCCcEEE--EcCCCeEEEEEeeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYP--KGSSDW--VEFGAGDLVT--IPKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~--~~g~e~--~~~~~GD~v~--~p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+.+++|++|.+.+.. .+|.+. ..+.|||++- |......+..+.+++ .++.+.
T Consensus 50 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A~~~~-~v~~i~ 108 (250)
T 3e6c_C 50 ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATAMEPT-RTCWFS 108 (250)
T ss_dssp CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEESSSE-EEEEEC
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEEcccE-EEEEEc
Confidence 4789999999998874 444332 3478999884 222256666677665 444443
No 236
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=67.21 E-value=12 Score=25.79 Aligned_cols=54 Identities=17% Similarity=0.150 Sum_probs=33.0
Q ss_pred ceEEEEEEecEEEEEeCCC--------c--eEEEECCCcEEE----E-cCCCeEEEEEeeeEEEEEEEec
Q 037642 14 AEETCYLLKGKVKVYPKGS--------S--DWVEFGAGDLVT----I-PKGLSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g--------~--e~~~~~~GD~v~----~-p~g~~~~~~~~~~~~k~y~~~~ 68 (74)
.+.+++|++|.+.+...+. . ....+.+||.|- | ..-...+..+.+++ +++++..
T Consensus 308 ~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~fGE~all~~~~r~~tv~A~~~~-~ll~I~~ 376 (416)
T 3tnp_B 308 ADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYFGELALVTNKPRAASAHAIGTV-KCLAMDV 376 (416)
T ss_dssp CCEEEEEEEEEEEEECC------------CEEEEECTTCEESGGGGTCCSCCSSEEEEEEEE-EEEEEEH
T ss_pred CCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEecHHHHhCCCCceeEEEEcCCe-EEEEEEH
Confidence 5899999999999986532 1 235689999872 2 22233444555554 5555543
No 237
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=66.77 E-value=6.2 Score=24.19 Aligned_cols=53 Identities=17% Similarity=0.136 Sum_probs=33.8
Q ss_pred ceEEEEEEecEEEEEe--CCCce--EEEECCCcEEEE-----cCCCeEEEEEeeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYP--KGSSD--WVEFGAGDLVTI-----PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~--~~g~e--~~~~~~GD~v~~-----p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+.+++|++|.+.+.. .+|.+ ...+.|||++-. ..-...+..+.+++ .++.+.
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~-~v~~i~ 108 (231)
T 3e97_A 47 GEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVGETAVLAHQERSASVRALTPV-RTLMLH 108 (231)
T ss_dssp TTCEEEECSSEEEEEEECC--CEEEEEEEESSEEESTTTTTCCCCCCEEEEESSCE-EEEEEC
T ss_pred CCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEeeHHHhCCCCceEEEEECCcE-EEEEEe
Confidence 5789999999999875 34422 245899998742 23345666666665 455543
No 238
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=65.93 E-value=5.2 Score=23.27 Aligned_cols=22 Identities=23% Similarity=0.262 Sum_probs=17.3
Q ss_pred EECCCcEEEEcCCCeEEEEEee
Q 037642 37 EFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
.+++||.|+|++-.....++.+
T Consensus 63 ~VkvGD~Vlf~ky~Gtevk~dg 84 (100)
T 1we3_O 63 EVKEGDIVVFAKYGGTEIEIDG 84 (100)
T ss_dssp SCCTTCEEEECTTCSEEEECSS
T ss_pred ecCCCCEEEECCCCCeEEEECC
Confidence 5899999999997766666544
No 239
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=65.79 E-value=0.44 Score=27.92 Aligned_cols=31 Identities=23% Similarity=0.424 Sum_probs=23.1
Q ss_pred eEEEEEEec--EEEEEeCCCceEEEECCCcEEEE
Q 037642 15 EETCYLLKG--KVKVYPKGSSDWVEFGAGDLVTI 46 (74)
Q Consensus 15 ~E~~~vleG--~~~~~~~~g~e~~~~~~GD~v~~ 46 (74)
.---|++.| +..+.++|. .-..+++||.++|
T Consensus 29 RfeTYvI~GerSG~I~lNGA-AArl~~~GD~vII 61 (97)
T 1uhe_A 29 RFSTYVILGKKRGEICVNGA-AARKVAIGDVVII 61 (97)
T ss_dssp EEEEECEEECSTTCEEEEGG-GGGGCCTTCEEEE
T ss_pred eEEEEEEeeccCCeEEEchH-HHccCCCCCEEEE
Confidence 334477777 466778887 4578999999987
No 240
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=65.67 E-value=2.6 Score=25.53 Aligned_cols=15 Identities=33% Similarity=0.570 Sum_probs=12.1
Q ss_pred EECCCcEEEEcCCCe
Q 037642 37 EFGAGDLVTIPKGLS 51 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~ 51 (74)
.++|||+++|..+..
T Consensus 67 ~l~pGDLvFf~~~~~ 81 (135)
T 2k1g_A 67 NLRTGDLVLFRAGST 81 (135)
T ss_dssp GCCTTEEEEEEETTT
T ss_pred HccCCcEEEECCCCC
Confidence 479999999976654
No 241
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=65.36 E-value=4.8 Score=23.17 Aligned_cols=23 Identities=13% Similarity=0.059 Sum_probs=17.4
Q ss_pred EEECCCcEEEEcCCCeEEEEEee
Q 037642 36 VEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
..+++||.|+|++-.....++.+
T Consensus 57 ~~VkvGD~Vl~~ky~Gtevk~dg 79 (95)
T 3nx6_A 57 PVVKVGDKVIYGQYAGSSYKSEG 79 (95)
T ss_dssp CSCCTTCEEEECTTCSEEEEETT
T ss_pred cccCCCCEEEECCcCCeEEEECC
Confidence 35899999999997666555543
No 242
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=63.27 E-value=14 Score=25.08 Aligned_cols=53 Identities=13% Similarity=0.228 Sum_probs=33.3
Q ss_pred ceEEEEEEecEEEEEeCC--Cc---eEEEECCCcEEE----E-cCCCeEEEEEeeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYPKG--SS---DWVEFGAGDLVT----I-PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~--g~---e~~~~~~GD~v~----~-p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+.+++|++|.+.+.... ++ ....+.+||.|- + ..-...+....+++ +++.+.
T Consensus 289 ~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~fGe~all~~~~r~~tv~A~~~~-~ll~i~ 351 (381)
T 4din_B 289 GDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYFGEIALLLNRPRAATVVARGPL-KCVKLD 351 (381)
T ss_dssp CCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEECTTGGGSCCBCSSEEEESSCB-EEEEEE
T ss_pred CCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEechHHHhCCCCceeEEEEcCCE-EEEEEe
Confidence 588999999999998642 21 245799999872 2 11223445555554 555554
No 243
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=63.20 E-value=13 Score=21.49 Aligned_cols=22 Identities=18% Similarity=0.146 Sum_probs=16.1
Q ss_pred EEEEeCCCceEEEECCCcEEEEcC
Q 037642 25 VKVYPKGSSDWVEFGAGDLVTIPK 48 (74)
Q Consensus 25 ~~~~~~~g~e~~~~~~GD~v~~p~ 48 (74)
+.+...| ..+.+.+||.+.+++
T Consensus 3 AIi~~gG--kQykV~~Gd~i~vek 24 (101)
T 3v2d_V 3 AIVKTGG--KQYRVEPGLKLRVEK 24 (101)
T ss_dssp EEEEETT--EEEEECTTCEEEESC
T ss_pred EEEEeCC--EEEEEeCCCEEEECC
Confidence 3455555 579999999998863
No 244
>3anw_A GINS51, putative uncharacterized protein; SLD5 superfamily, DNA replication, replication; 2.65A {Thermococcus kodakarensis}
Probab=63.11 E-value=4.2 Score=25.83 Aligned_cols=33 Identities=24% Similarity=0.249 Sum_probs=25.0
Q ss_pred eEEEEEEecEEEEEeCCCceEEE-ECCCcEEEEcC
Q 037642 15 EETCYLLKGKVKVYPKGSSDWVE-FGAGDLVTIPK 48 (74)
Q Consensus 15 ~E~~~vleG~~~~~~~~g~e~~~-~~~GD~v~~p~ 48 (74)
.+.+.|+.-.-.+...++ ..+. +++||+|.+|+
T Consensus 136 ~e~~~v~~d~p~i~~~d~-r~Y~Pl~~~Dvv~LP~ 169 (188)
T 3anw_A 136 KEAYIIQIDLPAVLGPDM-KEYGPFMAGDMAIIPT 169 (188)
T ss_dssp EEEEEECSCBCCEECTTS-CEECCBCTTCEEEEEH
T ss_pred CcceEEEeCCCceecCCc-CcccCCCcccEEeecH
Confidence 344556777767777776 4688 99999999995
No 245
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=61.84 E-value=11 Score=22.76 Aligned_cols=64 Identities=17% Similarity=0.293 Sum_probs=38.2
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeC--CCce--EEEECCCcEEEEc----C-C-CeEEEEEeeeEEEEEEEec
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPK--GSSD--WVEFGAGDLVTIP----K-G-LSCTWDVSVAVDKYYKFES 68 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~--~g~e--~~~~~~GD~v~~p----~-g-~~~~~~~~~~~~k~y~~~~ 68 (74)
.+|..-+.. ..+.+++|++|.+.+... +|.+ ...+.|||++-.. . . ...+....+++ .++.+..
T Consensus 38 ~~g~~i~~~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~~~~-~v~~i~~ 113 (227)
T 3dkw_A 38 DKGAYVFRQGEPAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAEAMMFMDTPNYVATAQAVVPS-QLFRFSN 113 (227)
T ss_dssp CTTEEEECTTSBCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESCTTTTTTCSBCSSCEEESSCC-EEEEEES
T ss_pred CCCCEEEcCCCccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEcCcE-EEEEEeH
Confidence 455554443 257899999999998753 2321 2457899988431 1 1 34555666665 4455543
No 246
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=61.69 E-value=28 Score=23.77 Aligned_cols=62 Identities=15% Similarity=0.099 Sum_probs=36.7
Q ss_pred CceEEEec--CceEEEEEEecEEEEEeC--CC----ceEEEECCCcEEEEc----CCCeEEEEEeeeEEEEEEEe
Q 037642 5 PGKFQLKF--DAEETCYLLKGKVKVYPK--GS----SDWVEFGAGDLVTIP----KGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 5 pg~~~~~~--~~~E~~~vleG~~~~~~~--~g----~e~~~~~~GD~v~~p----~g~~~~~~~~~~~~k~y~~~ 67 (74)
+|..-+.. ..+.+++|++|.+.+... +| .....+.+||+|--. .-...+..+.+++ .++.+.
T Consensus 72 ~g~~i~~~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~~l~~~~~~~tv~A~~~~-~l~~i~ 145 (469)
T 1o7f_A 72 KGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESS-ELLRIE 145 (469)
T ss_dssp TTCEEECTTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGGGGGTCBCSSEEEESSSE-EEEEEE
T ss_pred CCCEEEeCCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchhhhCCCCccceEEEccce-eEEEEc
Confidence 44444433 258899999999999753 22 123578999988432 1223455555555 444443
No 247
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=61.23 E-value=23 Score=27.11 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=27.8
Q ss_pred CCceEEEec--CceEEEEEEecEEEEEeCC------CceEEEECCCcEE
Q 037642 4 SPGKFQLKF--DAEETCYLLKGKVKVYPKG------SSDWVEFGAGDLV 44 (74)
Q Consensus 4 ~pg~~~~~~--~~~E~~~vleG~~~~~~~~------g~e~~~~~~GD~v 44 (74)
++|.+-+.. ..+.++.|++|++.|.+.+ +.....+.+||.|
T Consensus 71 ~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 71 EKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp CTTCEEECTTSCCCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred CCCCEEEcCCCcCCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 345544443 3689999999999998742 1123578999987
No 248
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=60.95 E-value=2.2 Score=23.51 Aligned_cols=26 Identities=19% Similarity=0.360 Sum_probs=21.5
Q ss_pred eEEEECCCcEE-EEcCCCeEEEEEeee
Q 037642 34 DWVEFGAGDLV-TIPKGLSCTWDVSVA 59 (74)
Q Consensus 34 e~~~~~~GD~v-~~p~g~~~~~~~~~~ 59 (74)
+.+.++.||+| ++-++..+.|-+...
T Consensus 22 ~ei~lk~Gd~VeVl~k~~~gwW~vr~~ 48 (71)
T 1v1c_A 22 DAITLREGQYVEVLDAAHPLRWLVRTK 48 (71)
T ss_dssp TBCCBCTTCEEEEEEEEETTEEEEEEC
T ss_pred ceeeecCCCEEEEEEcCCCCEEEEEec
Confidence 36899999999 678888889988765
No 249
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=58.06 E-value=8.1 Score=22.36 Aligned_cols=23 Identities=17% Similarity=0.110 Sum_probs=17.6
Q ss_pred EEECCCcEEEEcCCCeEEEEEee
Q 037642 36 VEFGAGDLVTIPKGLSCTWDVSV 58 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~~~~~~ 58 (74)
..+++||.|+|++-.....++.+
T Consensus 60 ~~VkvGD~Vlf~ky~Gtevk~dg 82 (99)
T 1p3h_A 60 LDVAEGDTVIYSKYGGTEIKYNG 82 (99)
T ss_dssp CSCCTTCEEEEECTTCEEEEETT
T ss_pred cccCCCCEEEECCcCCeEEEECC
Confidence 35999999999997666666543
No 250
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=57.72 E-value=12 Score=21.80 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=14.1
Q ss_pred EEEeCCCceEEEECCCcEEEEcC
Q 037642 26 KVYPKGSSDWVEFGAGDLVTIPK 48 (74)
Q Consensus 26 ~~~~~~g~e~~~~~~GD~v~~p~ 48 (74)
.+...| ..+.+.+||.+.++.
T Consensus 4 Ii~~gG--kQykV~~Gd~i~vek 24 (103)
T 3r8s_R 4 VFQSGG--KQHRVSEGQTVRLEK 24 (103)
T ss_dssp EEECSS--SEEEEETTCEEEESC
T ss_pred EEEECC--EEEEEeCCCEEEECC
Confidence 344444 468888888888863
No 251
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=56.19 E-value=15 Score=25.42 Aligned_cols=53 Identities=6% Similarity=0.104 Sum_probs=32.5
Q ss_pred ceEEEEEEecEEEEEe-CCCce--EEEECCCcEEE----E-cCCCeEEEEEeeeEEEEEEEe
Q 037642 14 AEETCYLLKGKVKVYP-KGSSD--WVEFGAGDLVT----I-PKGLSCTWDVSVAVDKYYKFE 67 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~-~~g~e--~~~~~~GD~v~----~-p~g~~~~~~~~~~~~k~y~~~ 67 (74)
.+.+++|++|.+.+.. .+|.+ ...+.+||+|- + ..-...+..+.+++ .++.+.
T Consensus 186 ~d~~YiI~sG~v~v~~~~~G~~~~v~~l~~G~~fGe~all~~~pr~atv~A~~d~-~l~~i~ 246 (416)
T 3tnp_B 186 GDNFYVIDRGTFDIYVKCDGVGRCVGNYDNRGSFGELALMYNTPKAATITATSPG-ALWGLD 246 (416)
T ss_dssp CCEEEEEEECEEEEEEECSSCEEEEEEEESCCEECGGGGTSCCCCSSEEEESSSE-EEEEEE
T ss_pred CceEEEEEeeEEEEEEecCCCEEEEEEecCCCEEeeHHHhcCCCcccEEEEccCe-EEEEEe
Confidence 5889999999999875 33322 24588999763 1 12223455556665 455554
No 252
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=54.04 E-value=11 Score=23.48 Aligned_cols=20 Identities=30% Similarity=0.415 Sum_probs=17.2
Q ss_pred EECCCcEEEEcCCCeEEEEE
Q 037642 37 EFGAGDLVTIPKGLSCTWDV 56 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~~~~~~ 56 (74)
.|++||.+.+|.+....|.-
T Consensus 120 eLk~GD~v~~~~~~~~~~~~ 139 (186)
T 2jmz_A 120 MVKVGDYIYIPKNNTINLDE 139 (186)
T ss_dssp GCCTTSEEEEECSSSEEEEE
T ss_pred cCCCCCEEEecccCCccceE
Confidence 48999999999998888853
No 253
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=52.09 E-value=15 Score=24.14 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=21.7
Q ss_pred cEEEEEeCCCceEEEECCCcEEEEcCCCeEEEE
Q 037642 23 GKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWD 55 (74)
Q Consensus 23 G~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~ 55 (74)
|+..+....+...+..++|++++||.+..|.-.
T Consensus 147 Getvf~~~~~~~~V~P~~G~~v~F~s~~lH~v~ 179 (243)
T 3dkq_A 147 GELVIQDTYGQQSIKLSAGSLVLYPSSSLHQVT 179 (243)
T ss_dssp CCEEEEETTEEEEECCCTTCEEEEETTSEEEEC
T ss_pred ceEEEeeCCCcEEEecCCCEEEEECCCCeEcCc
Confidence 555555544323455667999999998766544
No 254
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=51.57 E-value=7.5 Score=22.50 Aligned_cols=16 Identities=31% Similarity=0.534 Sum_probs=13.4
Q ss_pred EECCCcEEEEcCCCeE
Q 037642 37 EFGAGDLVTIPKGLSC 52 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~~ 52 (74)
.+.+||++.+.+|...
T Consensus 29 ~l~~GDiv~v~~G~~i 44 (113)
T 2hc8_A 29 EVAVGDIVIVRPGEKI 44 (113)
T ss_dssp GCCTTCEEEECTTCBC
T ss_pred HCCCCCEEEECCCCEE
Confidence 4889999999999754
No 255
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=50.41 E-value=6.4 Score=23.16 Aligned_cols=16 Identities=19% Similarity=0.318 Sum_probs=13.2
Q ss_pred EECCCcEEEEcCCCeE
Q 037642 37 EFGAGDLVTIPKGLSC 52 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~~ 52 (74)
.+.+||++.+.+|...
T Consensus 41 ~l~~GDiv~v~~G~~i 56 (124)
T 2kij_A 41 LVQRGDIIKVVPGGKF 56 (124)
T ss_dssp TCCTTCEEECCTTCBC
T ss_pred HCCCCCEEEECCCCEE
Confidence 4789999999998753
No 256
>1qd7_I S17 ribosomal protein; 30S ribosomal subunit, low resolution model, ribosome; 5.50A {Thermus thermophilus} SCOP: i.1.1.3 PDB: 1eg0_G 1rip_A
Probab=48.66 E-value=34 Score=19.35 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=25.2
Q ss_pred EEEeCCCceEEEECCCcEEEE----cCCCeEEEEEeeeEEEE
Q 037642 26 KVYPKGSSDWVEFGAGDLVTI----PKGLSCTWDVSVAVDKY 63 (74)
Q Consensus 26 ~~~~~~g~e~~~~~~GD~v~~----p~g~~~~~~~~~~~~k~ 63 (74)
.+...+. ...++.||.|.| |=.-+-+|.+.+-+.+-
T Consensus 40 k~~aHDe--~n~~k~GD~V~I~E~RPlSKtK~~~vv~iv~~a 79 (89)
T 1qd7_I 40 KYKAHDE--HNEAKVGDIVKIMETRPLSATKRFRLVEIVEKA 79 (89)
T ss_pred EEEEeCC--ccCCCCCCEEEEEEcccCCCCEEEEEEEEEeec
Confidence 3444452 357999999999 66667789888766543
No 257
>2jyx_A Lipoprotein SPR; solution structure, construct optimized, membrane, palmitate, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} PDB: 2k1g_A
Probab=48.30 E-value=7.1 Score=23.25 Aligned_cols=14 Identities=36% Similarity=0.574 Sum_probs=11.5
Q ss_pred EECCCcEEEEcCCC
Q 037642 37 EFGAGDLVTIPKGL 50 (74)
Q Consensus 37 ~~~~GD~v~~p~g~ 50 (74)
.++|||+++|..+.
T Consensus 67 ~l~pGDLvff~~~~ 80 (136)
T 2jyx_A 67 NLRTGDLVLFRAGS 80 (136)
T ss_dssp TCCTTEEEEEECSS
T ss_pred hCCCCCEEEECCCC
Confidence 47899999997754
No 258
>2l3b_A Conserved protein found in conjugate transposon; beta, structural genomics, PSI-biology; NMR {Bacteroides thetaiotaomicron}
Probab=48.15 E-value=11 Score=23.02 Aligned_cols=26 Identities=15% Similarity=0.221 Sum_probs=21.9
Q ss_pred EEEecEEEEEeCCCceEEEECCCcEEEEc
Q 037642 19 YLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47 (74)
Q Consensus 19 ~vleG~~~~~~~~g~e~~~~~~GD~v~~p 47 (74)
+=.+|.+.+..++| ..+.|.|..-++
T Consensus 52 FQ~dGkG~L~~~dg---~~l~PND~YpL~ 77 (130)
T 2l3b_A 52 FQPDGAGTLKMSDG---TVLLPNDLYPLP 77 (130)
T ss_dssp ECSSCCCEEEETTS---CEECTTSCEECS
T ss_pred EeecCCeeEEeCCC---CEecCCcccccC
Confidence 34589999999997 489999999998
No 259
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=47.13 E-value=0.96 Score=26.41 Aligned_cols=27 Identities=30% Similarity=0.350 Sum_probs=20.8
Q ss_pred EEEe---cEEEEEeCCCceEEEECCCcEEEE
Q 037642 19 YLLK---GKVKVYPKGSSDWVEFGAGDLVTI 46 (74)
Q Consensus 19 ~vle---G~~~~~~~~g~e~~~~~~GD~v~~ 46 (74)
|++. |+..+.++|. .-..+++||.++|
T Consensus 34 YvI~GerGSG~I~lNGA-AArl~~~GD~vII 63 (96)
T 1vc3_B 34 YALPGERGSGVIGINGA-AAHLVKPGDLVIL 63 (96)
T ss_dssp ECEEECTTTTCEEEEGG-GGGTCCTTCEEEE
T ss_pred EEEEccCCCCeEEEchH-HHccCCCCCEEEE
Confidence 4554 4677888887 4578999999987
No 260
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=46.60 E-value=1.4 Score=26.47 Aligned_cols=28 Identities=25% Similarity=0.382 Sum_probs=21.4
Q ss_pred EEEEec---EEEEEeCCCceEEEECCCcEEEE
Q 037642 18 CYLLKG---KVKVYPKGSSDWVEFGAGDLVTI 46 (74)
Q Consensus 18 ~~vleG---~~~~~~~~g~e~~~~~~GD~v~~ 46 (74)
-|++.| +..+.++|. .-..+++||.++|
T Consensus 60 TYvI~GerGSg~I~lNGA-AAr~~~~GD~vII 90 (114)
T 3oug_A 60 TYVIKGEPNSKTIALNGP-AARRCEIGDQLFI 90 (114)
T ss_dssp EEEEEECTTSCCEEEEGG-GGGGCCTTCEEEE
T ss_pred EEEEEccCCCCEEEeCCH-HHhccCCCCEEEE
Confidence 355554 678888887 4578999999988
No 261
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=46.26 E-value=1.8 Score=26.90 Aligned_cols=27 Identities=26% Similarity=0.368 Sum_probs=21.6
Q ss_pred EEEe---cEEEEEeCCCceEEEECCCcEEEE
Q 037642 19 YLLK---GKVKVYPKGSSDWVEFGAGDLVTI 46 (74)
Q Consensus 19 ~vle---G~~~~~~~~g~e~~~~~~GD~v~~ 46 (74)
|++. |+..+.++|. .-..+++||.++|
T Consensus 75 YvI~GerGSG~I~lNGA-AArl~~~GD~VII 104 (143)
T 1pqh_A 75 YAIAAERGSRIISVNGA-AAHCASVGDIVII 104 (143)
T ss_dssp EEEEECTTCCCEECCGG-GGGTCCTTCEEEE
T ss_pred EEEEccCCCceEEechH-HHccCCCCCEEEE
Confidence 4554 5788999997 4688999999998
No 262
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=45.60 E-value=9.2 Score=22.47 Aligned_cols=21 Identities=10% Similarity=0.185 Sum_probs=16.0
Q ss_pred EEEEeCCCceEEEECCCcEEEE
Q 037642 25 VKVYPKGSSDWVEFGAGDLVTI 46 (74)
Q Consensus 25 ~~~~~~~g~e~~~~~~GD~v~~ 46 (74)
.+++.++. .-..+++||.+.|
T Consensus 22 iEiRlnd~-k~~~ikvGD~I~f 42 (109)
T 2z0t_A 22 IEGRLYDE-KRRQIKPGDIIIF 42 (109)
T ss_dssp EEEEECCT-TGGGCCTTCEEEE
T ss_pred EEEEecch-hhhcCCCCCEEEE
Confidence 45666775 3457999999999
No 263
>2l7q_A Conserved protein found in conjugate transposon; NESG, structural genomics, PSI-biology; NMR {Bacteroides vulgatus}
Probab=43.76 E-value=16 Score=22.05 Aligned_cols=26 Identities=12% Similarity=0.118 Sum_probs=21.9
Q ss_pred EEEecEEEEEeCCCceEEEECCCcEEEEc
Q 037642 19 YLLKGKVKVYPKGSSDWVEFGAGDLVTIP 47 (74)
Q Consensus 19 ~vleG~~~~~~~~g~e~~~~~~GD~v~~p 47 (74)
+=.+|.+.+..++| ..+.|.|..-++
T Consensus 51 FQ~dGkG~L~~~~G---tvl~PND~YpL~ 76 (124)
T 2l7q_A 51 FQPDGKGSLKMEDG---TVLKPNDRYLLN 76 (124)
T ss_dssp ECCSSCEEEEETTS---CBCCTTCEECCS
T ss_pred EeecCCeeEEecCC---cEeccccccccc
Confidence 34589999999997 479999999888
No 264
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=42.84 E-value=1.5 Score=25.84 Aligned_cols=28 Identities=25% Similarity=0.180 Sum_probs=21.4
Q ss_pred EEEec--EEEEEeCCCceEEEECCCcEEEEc
Q 037642 19 YLLKG--KVKVYPKGSSDWVEFGAGDLVTIP 47 (74)
Q Consensus 19 ~vleG--~~~~~~~~g~e~~~~~~GD~v~~p 47 (74)
|++.| +..+.++|. .-..+++||.++|=
T Consensus 34 YvI~GeGSG~I~lNGA-AArl~~~GD~vII~ 63 (102)
T 3plx_B 34 YTIATQEEGVVCLNGA-AARLAEVGDKVIIM 63 (102)
T ss_dssp ECEEESSTTCEEEEGG-GGGGCCTTCEEEEE
T ss_pred EEEEcCCCCEEEeCcH-HHhccCCCCEEEEE
Confidence 45554 677888887 45789999999883
No 265
>4dpz_X HRAS-like suppressor 2; alpha/beta fold, enzyme phospholipid acyltransferase, hydrol transferase; 1.25A {Homo sapiens} PDB: 4fa0_A 2kyt_A
Probab=42.35 E-value=16 Score=22.16 Aligned_cols=18 Identities=28% Similarity=0.421 Sum_probs=12.6
Q ss_pred EECCCcEEEEcCCCeEEE
Q 037642 37 EFGAGDLVTIPKGLSCTW 54 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~~~~ 54 (74)
.++|||+++|+.+.-.-|
T Consensus 7 ~~~pGDlv~~~~~~~~H~ 24 (137)
T 4dpz_X 7 RPRLGDLIEISRFGYAHW 24 (137)
T ss_dssp CCCTTCEEEEECSSSEEE
T ss_pred cCCCCCEEEEeCCCCCEE
Confidence 578999998876543333
No 266
>3jxo_A TRKA-N domain protein; TRKA K+ channel component, structural genomics, PSI-2-2, Pro structure initiative, joint center for structural genomics; 1.55A {Thermotoga SP}
Probab=41.65 E-value=19 Score=18.98 Aligned_cols=28 Identities=21% Similarity=0.222 Sum_probs=17.7
Q ss_pred EEEEEEecEEEEEeCCCceEEEECCCcEEEE
Q 037642 16 ETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI 46 (74)
Q Consensus 16 E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~ 46 (74)
-+.-|.+|.-.+. ..+ ...+++||.+++
T Consensus 42 ~i~~I~R~~~~~~-p~~--~~~l~~GD~l~v 69 (86)
T 3jxo_A 42 IIAAIVRGGVLVV-PRG--DTEILSGDKLYV 69 (86)
T ss_dssp EEEEEEETTEEEC-CCT--TCBCCTTCEEEE
T ss_pred EEEEEEECCEEEC-CCC--CCEECCCCEEEE
Confidence 4555556554443 443 268999999876
No 267
>4dot_A Group XVI phospholipase A2; alpha/beta fold, phospholipase/acyltransferase, phosphatidyl phosphatidylethanolamine, membrane, hydrolase; 1.96A {Homo sapiens}
Probab=39.43 E-value=20 Score=21.89 Aligned_cols=20 Identities=30% Similarity=0.473 Sum_probs=13.7
Q ss_pred EEECCCcEEEEcCCCeEEEE
Q 037642 36 VEFGAGDLVTIPKGLSCTWD 55 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~~~ 55 (74)
..++|||+++|+.+.-.-|-
T Consensus 6 ~~~~pGDlv~~~~~~~~H~g 25 (140)
T 4dot_A 6 PEPKPGDLIEIFRPFYRHWA 25 (140)
T ss_dssp CCCCTTCEEEEEETTEEEEE
T ss_pred cCCCCCCEEEEeCCCCCEEE
Confidence 46899999998755433333
No 268
>2e9x_D GINS complex subunit 4; eukaryotic DNA replication; HET: DNA; 2.30A {Homo sapiens} SCOP: a.278.1.4 d.344.1.3 PDB: 2q9q_B* 2eho_A*
Probab=38.95 E-value=53 Score=21.11 Aligned_cols=33 Identities=6% Similarity=-0.016 Sum_probs=21.9
Q ss_pred eEEEEEEecEEEEEeCC--Cc---eEEEECCCcEEEEc
Q 037642 15 EETCYLLKGKVKVYPKG--SS---DWVEFGAGDLVTIP 47 (74)
Q Consensus 15 ~E~~~vleG~~~~~~~~--g~---e~~~~~~GD~v~~p 47 (74)
.-++-|++-...+.+++ |. +.+.+.+|+.+++|
T Consensus 170 ~VfvRvl~d~g~v~~~~~~g~~~~~~i~L~kgs~~~vr 207 (223)
T 2e9x_D 170 YVFLRVRERQENILVEPDTDEQRDYVIDLEKGSQHLIR 207 (223)
T ss_dssp EEEEEESSCEEEEEECCSSCGGGCEEEEECTTCEEEEE
T ss_pred eEEEEEeeccCeEEeCCCCCCccceeEEEccCCEEEEE
Confidence 44555666555565544 20 26899999999987
No 269
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=38.74 E-value=10 Score=22.70 Aligned_cols=12 Identities=25% Similarity=0.315 Sum_probs=10.1
Q ss_pred EECCCcEEEEcC
Q 037642 37 EFGAGDLVTIPK 48 (74)
Q Consensus 37 ~~~~GD~v~~p~ 48 (74)
.++|||+++|..
T Consensus 89 ~~~pGDlvff~~ 100 (142)
T 3gt2_A 89 QARKGDLIFYGP 100 (142)
T ss_dssp GCCTTCEEEESG
T ss_pred hCCCCCEEEeCC
Confidence 479999999964
No 270
>3kw0_A Cysteine peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: LYS; 2.50A {Bacillus cereus}
Probab=38.16 E-value=36 Score=21.74 Aligned_cols=34 Identities=18% Similarity=0.092 Sum_probs=22.0
Q ss_pred EECCCcEEEEcCC--------------CeEEEEEeeeEEEEEEEecCC
Q 037642 37 EFGAGDLVTIPKG--------------LSCTWDVSVAVDKYYKFESTS 70 (74)
Q Consensus 37 ~~~~GD~v~~p~g--------------~~~~~~~~~~~~k~y~~~~~~ 70 (74)
.+++||++++... .+|.--+...-.+.|++.++.
T Consensus 39 ~l~~GDlif~~~~~~~s~~I~~~T~s~~sHvgI~~~~~~~~~vieA~~ 86 (214)
T 3kw0_A 39 VLKTGDIFLCSGNYLVSKLIKKVSESMFSHTGIIVKWGEHTLIMESVE 86 (214)
T ss_dssp TCCTTCEEEEEECSHHHHHHHHHTTSSCCEEEEEEEETTEEEEEEEET
T ss_pred hCCCCCEEEEeCCCcHHHHHHHhcCCCCcEEEEEEecCCceEEEEecC
Confidence 5889999999532 445555554445667777753
No 271
>4e2u_A PHO RADA intein; HINT-fold, unknown function; 1.58A {Pyrococcus horikoshii} PDB: 2lqm_A 4e2t_A*
Probab=37.91 E-value=51 Score=19.99 Aligned_cols=17 Identities=24% Similarity=0.206 Sum_probs=13.3
Q ss_pred EECCCcEEEEcCCCeEE
Q 037642 37 EFGAGDLVTIPKGLSCT 53 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~~~ 53 (74)
.|++||.+.+|.|....
T Consensus 113 ~L~~Gd~l~~~~gs~~~ 129 (168)
T 4e2u_A 113 EVKPGDVVVGVRNGELE 129 (168)
T ss_dssp GCCTTCEEEEEETTEEE
T ss_pred HCCCCCEEEeccCCCcc
Confidence 47899999999984433
No 272
>2r32_A GCN4-PII/tumor necrosis factor ligand superfamily member 18 fusion protein; gitrl, glucocorticoid-induced TNF receptor ligand, cytokine; 1.95A {Saccharomyces cerevisiae} SCOP: b.22.1.1 PDB: 1ce0_A 3f86_A* 3f87_A*
Probab=35.88 E-value=24 Score=22.20 Aligned_cols=13 Identities=23% Similarity=0.335 Sum_probs=11.0
Q ss_pred EEEECCCcEEEEc
Q 037642 35 WVEFGAGDLVTIP 47 (74)
Q Consensus 35 ~~~~~~GD~v~~p 47 (74)
.+++++||.+++.
T Consensus 128 vfELh~GDsIfln 140 (166)
T 2r32_A 128 TYELHVGDTIDLI 140 (166)
T ss_dssp EEEECTTCEEEEE
T ss_pred EEEecCCCEEEEE
Confidence 6899999999874
No 273
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=35.87 E-value=2.1 Score=26.52 Aligned_cols=29 Identities=24% Similarity=0.282 Sum_probs=21.6
Q ss_pred EEEe---cEEEEEeCCCceEEEECCCcEEEEcC
Q 037642 19 YLLK---GKVKVYPKGSSDWVEFGAGDLVTIPK 48 (74)
Q Consensus 19 ~vle---G~~~~~~~~g~e~~~~~~GD~v~~p~ 48 (74)
|++. |+..+.++|. .-..+++||.++|=.
T Consensus 58 YvI~GerGSG~I~lNGA-AArl~~~GD~vII~a 89 (139)
T 2c45_A 58 YAITGERGSGVIGINGA-AAHLVHPGDLVILIA 89 (139)
T ss_dssp CEEEECTTTTCEEEESS-TTTTSCTTCEEEEEE
T ss_pred EEEEccCCCCEEEEchH-HHccCCCCCEEEEEE
Confidence 4554 4677888887 457899999998843
No 274
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=34.17 E-value=32 Score=20.10 Aligned_cols=12 Identities=25% Similarity=0.620 Sum_probs=8.0
Q ss_pred EEEECCCcEEEE
Q 037642 35 WVEFGAGDLVTI 46 (74)
Q Consensus 35 ~~~~~~GD~v~~ 46 (74)
.+++++||.|.+
T Consensus 22 ~i~V~~GdtV~f 33 (123)
T 3erx_A 22 FVRAEPGDVINF 33 (123)
T ss_dssp EEEECTTEEEEE
T ss_pred EEEECCCCEEEE
Confidence 367777777744
No 275
>2if6_A Hypothetical protein YIIX; structural genomics, metalloprotein, PSI-2, PR structure initiative, NEW YORK SGX research center for STRU genomics; 1.80A {Escherichia coli} SCOP: d.3.1.21
Probab=34.11 E-value=20 Score=22.13 Aligned_cols=14 Identities=14% Similarity=0.109 Sum_probs=11.5
Q ss_pred EEECCCcEEEEcCC
Q 037642 36 VEFGAGDLVTIPKG 49 (74)
Q Consensus 36 ~~~~~GD~v~~p~g 49 (74)
..+++||++++..+
T Consensus 3 ~~l~~GDlvf~~~~ 16 (186)
T 2if6_A 3 WQPQTGDIIFQISR 16 (186)
T ss_dssp CCCCTTCEEEECCC
T ss_pred ccCCCCCEEEEEcC
Confidence 36899999999764
No 276
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=33.89 E-value=13 Score=21.93 Aligned_cols=28 Identities=21% Similarity=0.068 Sum_probs=17.7
Q ss_pred ecEEEEEeCCCceEEEECCCcEEEEcCCC
Q 037642 22 KGKVKVYPKGSSDWVEFGAGDLVTIPKGL 50 (74)
Q Consensus 22 eG~~~~~~~~g~e~~~~~~GD~v~~p~g~ 50 (74)
.|.+ +.+..|.....++.||.|+||+|.
T Consensus 48 ~g~V-vAVG~g~~~~~vKvGD~Vl~~kg~ 75 (111)
T 1g31_A 48 LCVV-HSVGPDVPEGFCEVGDLTSLPVGQ 75 (111)
T ss_dssp EEEE-EEECTTSCTTSCCTTCEEEEEGGG
T ss_pred eEEE-EEECCCCccccccCCCEEEECCCc
Confidence 4444 334433222458899999999976
No 277
>4dov_A ORC1, origin recognition complex subunit 1; DNA replication, replication; 1.70A {Mus musculus} PDB: 4dow_A*
Probab=33.78 E-value=60 Score=20.36 Aligned_cols=31 Identities=13% Similarity=0.078 Sum_probs=23.3
Q ss_pred EEEecEEEEEeCCCceEEEECCCcEEEEcCCC
Q 037642 19 YLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGL 50 (74)
Q Consensus 19 ~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~ 50 (74)
+-.=.++.+.+++.. .+.++.||.|+|....
T Consensus 21 ~~~Y~~~~v~~~~~~-~~~i~vGd~VLI~~~D 51 (163)
T 4dov_A 21 QQMYREICMKINDGS-EIHIKVGQFVLIQGED 51 (163)
T ss_dssp EEEESEEEEECTTSC-EEEEETTCEEEECCSS
T ss_pred ceeeeEEEEecCCCC-CeEEeeCCEEEEeCCc
Confidence 334466778888864 7999999999995554
No 278
>2ftc_O L27MT, MRP-L27, mitochondrial 39S ribosomal protein L27; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_O
Probab=33.30 E-value=61 Score=17.57 Aligned_cols=39 Identities=15% Similarity=0.114 Sum_probs=29.9
Q ss_pred EEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeE
Q 037642 18 CYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAV 60 (74)
Q Consensus 18 ~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~ 60 (74)
-+|..|...++..+ ..+.||.-|-+-++.+.-..+.+.|
T Consensus 29 q~V~aG~IivrQRg----tk~hPG~nVg~GkD~TLfAl~~G~V 67 (69)
T 2ftc_O 29 HYVHAGNIIATQRH----FRWHPGAHVGVGKNKCLYALEEGIV 67 (69)
T ss_pred eEecCCeEEEecCC----CeEcCCCCeeecCCCcEEEccceEE
Confidence 46778999888887 3789999999988877666555544
No 279
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=32.97 E-value=9.1 Score=25.61 Aligned_cols=28 Identities=25% Similarity=0.509 Sum_probs=0.0
Q ss_pred ceEEEEEEecEEEEEeCCCceEEEECCCcEE
Q 037642 14 AEETCYLLKGKVKVYPKGSSDWVEFGAGDLV 44 (74)
Q Consensus 14 ~~E~~~vleG~~~~~~~~g~e~~~~~~GD~v 44 (74)
.+++++|++|.+.+...+ ...+++||.+
T Consensus 269 ~~~ly~I~~G~v~v~~~~---~~~l~~G~~f 296 (355)
T 3beh_A 269 GDRMFFVVEGSVSVATPN---PVELGPGAFF 296 (355)
T ss_dssp -------------------------------
T ss_pred CceEEEEEeeEEEEEECC---eeEECCCCEE
Confidence 578999999999998776 2589999976
No 280
>3tbm_A Putative uncharacterized protein; iron-sulfur, CDGSH, metal binding protein; HET: 2PE TLA; 1.80A {Ralstonia solanacearum}
Probab=32.02 E-value=41 Score=18.13 Aligned_cols=14 Identities=29% Similarity=0.762 Sum_probs=8.5
Q ss_pred EEEecEEEEEeCCC
Q 037642 19 YLLKGKVKVYPKGS 32 (74)
Q Consensus 19 ~vleG~~~~~~~~g 32 (74)
|+++|.+.|...+|
T Consensus 18 l~V~G~v~i~~~dG 31 (69)
T 3tbm_A 18 YHIKGSFRIVTQGG 31 (69)
T ss_dssp EEEESSCEEEESSC
T ss_pred EEEECCCeEECCCC
Confidence 45566666666665
No 281
>2j58_A WZA, outer membrane lipoprotein WZA; membrane protein; 2.26A {Escherichia coli} PDB: 2w8i_A 2w8h_A*
Probab=31.03 E-value=11 Score=26.09 Aligned_cols=26 Identities=23% Similarity=0.063 Sum_probs=18.9
Q ss_pred EEEECCCcEEEEcCCCeEEEEEeeeE
Q 037642 35 WVEFGAGDLVTIPKGLSCTWDVSVAV 60 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~~~~~~~ 60 (74)
-+.|++||.+++|+.......+.+.+
T Consensus 218 ~~~L~~GD~I~Vp~~~~~~v~V~GeV 243 (359)
T 2j58_A 218 NHLLYHGDILFIPSNDDLKVFVMGEV 243 (359)
T ss_dssp CCBCCTTCEEEECBGGGCEEEEEESB
T ss_pred ceeccCCCeEEEeeceeeeEEeeccc
Confidence 37899999999998765544454444
No 282
>4db5_A Tumor necrosis factor ligand superfamily member 1; gitrl, glucocorticoid-induced TNF receptor ligand, immune SY tnfrsf18; HET: B3P; 1.52A {Oryctolagus cuniculus} PDB: 4e4s_A 2r30_A 3b93_A 3b94_A 2q1m_A
Probab=30.35 E-value=36 Score=20.58 Aligned_cols=13 Identities=38% Similarity=0.749 Sum_probs=10.9
Q ss_pred EEEECCCcEEEEc
Q 037642 35 WVEFGAGDLVTIP 47 (74)
Q Consensus 35 ~~~~~~GD~v~~p 47 (74)
.+++++||.+++-
T Consensus 87 vfeL~~GD~Ifv~ 99 (125)
T 4db5_A 87 IYEFDAGDIIELR 99 (125)
T ss_dssp EEEECTTCEEEEE
T ss_pred EEEecCCCEEEEE
Confidence 6889999998874
No 283
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.23 E-value=54 Score=17.03 Aligned_cols=30 Identities=20% Similarity=0.187 Sum_probs=19.1
Q ss_pred EEEECCCcEEEEcCC---CeEEEEEeeeEEEEE
Q 037642 35 WVEFGAGDLVTIPKG---LSCTWDVSVAVDKYY 64 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g---~~~~~~~~~~~~k~y 64 (74)
...+++||++.+-.- ..+.|.....-++-|
T Consensus 33 eLsf~~Gd~i~v~~~~~~~~~Ww~g~~~g~~G~ 65 (80)
T 2d8h_A 33 DLNFQAGDRITVISKTDSHFDWWEGKLRGQTGI 65 (80)
T ss_dssp BCEECTTCEEEEEECCSCSSSEEEEEETTEEEE
T ss_pred eeeEcCCCEEEEeECcCCCCCeEEEEECCEEEE
Confidence 589999999977332 256676655433333
No 284
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=29.88 E-value=65 Score=19.10 Aligned_cols=14 Identities=7% Similarity=-0.026 Sum_probs=11.1
Q ss_pred EECCCcEEEEcCCC
Q 037642 37 EFGAGDLVTIPKGL 50 (74)
Q Consensus 37 ~~~~GD~v~~p~g~ 50 (74)
.+++||.++++.|.
T Consensus 91 ~l~~GD~v~~~~~~ 104 (145)
T 1at0_A 91 RIEEKNQVLVRDVE 104 (145)
T ss_dssp GCCTTCEEEEECTT
T ss_pred HCcCCCEEEEecCC
Confidence 47889999888873
No 285
>3m86_A Amoebiasin-2; cysteine protease inhibitor, protease, protein binding; HET: 1PE; 1.65A {Entamoeba histolytica} PDB: 3m88_A
Probab=29.65 E-value=37 Score=19.44 Aligned_cols=26 Identities=15% Similarity=0.396 Sum_probs=20.0
Q ss_pred eEEEECCCcEEEE--c--CCCeEEEEEeee
Q 037642 34 DWVEFGAGDLVTI--P--KGLSCTWDVSVA 59 (74)
Q Consensus 34 e~~~~~~GD~v~~--p--~g~~~~~~~~~~ 59 (74)
.++.++.||.+.| | +.+-.+|.+...
T Consensus 16 ~~I~v~~Ge~~~I~L~~NptTGY~W~~~~~ 45 (111)
T 3m86_A 16 ATLHISFNDLIKIQLRTNPSTGYAWNIEYP 45 (111)
T ss_dssp CEEEECTTCEEEEEEEECGGGTCEEEEECC
T ss_pred cEEEEcCCCEEEEEECCCCCCCeEEEEecC
Confidence 5899999999977 3 566778887654
No 286
>3pbi_A Invasion protein; peptidoglycan hydrolase, extracellular, invasion related Pro cell WALL, NLPC-like module, hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 3i86_A
Probab=28.79 E-value=18 Score=23.44 Aligned_cols=13 Identities=38% Similarity=0.501 Sum_probs=10.5
Q ss_pred EECCCcEEEEcCC
Q 037642 37 EFGAGDLVTIPKG 49 (74)
Q Consensus 37 ~~~~GD~v~~p~g 49 (74)
.++|||+++|..+
T Consensus 158 ~lqpGDLVff~~g 170 (214)
T 3pbi_A 158 EAKRGDLIFYGPG 170 (214)
T ss_dssp GCCTTCEEEESGG
T ss_pred hCCCCCEEEecCC
Confidence 5799999999544
No 287
>2in0_A Endonuclease PI-MTUI; hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 2l8l_A 2in9_A 2in8_A 3ifj_A 3igd_A
Probab=28.61 E-value=81 Score=18.13 Aligned_cols=14 Identities=21% Similarity=0.283 Sum_probs=11.7
Q ss_pred ECCCcEEEEcCCCe
Q 037642 38 FGAGDLVTIPKGLS 51 (74)
Q Consensus 38 ~~~GD~v~~p~g~~ 51 (74)
|++||.+.+|.|..
T Consensus 87 L~~Gd~v~~~~~~~ 100 (139)
T 2in0_A 87 LRKGDRVAVRDVET 100 (139)
T ss_dssp CCTTCEEEEECTTT
T ss_pred CCCCCEEEeCCCcc
Confidence 56899999998764
No 288
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=28.34 E-value=75 Score=17.10 Aligned_cols=29 Identities=28% Similarity=0.351 Sum_probs=18.0
Q ss_pred cEEEEEeCCCceEEEECCCcEEEE--cCCCeEEEEE
Q 037642 23 GKVKVYPKGSSDWVEFGAGDLVTI--PKGLSCTWDV 56 (74)
Q Consensus 23 G~~~~~~~~g~e~~~~~~GD~v~~--p~g~~~~~~~ 56 (74)
|.+++...+ .+..||.+-| |.|....+.+
T Consensus 20 g~~~ie~rN-----~f~~GD~iEi~~P~g~~~~~~v 50 (89)
T 4he6_A 20 GIATVQQRN-----HFRPGDEVEFFGPEIENFTQVI 50 (89)
T ss_dssp TEEEEEESS-----CBCTTCEEEEESTTSCCEEEEC
T ss_pred CEEEEEEcC-----CcCCCCEEEEEcCCCCcEEEEe
Confidence 555555544 4778888843 7776666654
No 289
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=28.24 E-value=33 Score=21.80 Aligned_cols=21 Identities=19% Similarity=0.109 Sum_probs=16.0
Q ss_pred EEECCCcEEEEcCCCeEEEEE
Q 037642 36 VEFGAGDLVTIPKGLSCTWDV 56 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~~~~ 56 (74)
+.-++||+|+||....|.-.-
T Consensus 171 i~P~~G~lvlFpS~l~H~V~p 191 (216)
T 2rg4_A 171 VAPKVGDVLLWESWLRHEVPM 191 (216)
T ss_dssp ECCCTTEEEEEETTSCEEECC
T ss_pred ecCCCCeEEEECCCCEEeccC
Confidence 445779999999987776543
No 290
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=28.14 E-value=68 Score=18.63 Aligned_cols=26 Identities=23% Similarity=0.225 Sum_probs=20.8
Q ss_pred eEEEECCCcEEEE--c--CCCeEEEEEeee
Q 037642 34 DWVEFGAGDLVTI--P--KGLSCTWDVSVA 59 (74)
Q Consensus 34 e~~~~~~GD~v~~--p--~g~~~~~~~~~~ 59 (74)
.++.++.||.+.| | +.+-.+|.+..+
T Consensus 13 ~ti~l~~Ge~~~I~L~~NPtTGY~W~~~~~ 42 (121)
T 2cio_B 13 KTIRMVIGETFTIELESNPTTGYTWLRSGL 42 (121)
T ss_pred cEEEEcCCCEEEEEeCCCCCCCeEEEEecC
Confidence 5799999999876 4 577788998873
No 291
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=28.05 E-value=67 Score=21.80 Aligned_cols=34 Identities=3% Similarity=-0.116 Sum_probs=26.5
Q ss_pred EEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeee
Q 037642 24 KVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 24 ~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
.|.+.+++ +.+.+++|++++|-....|...-.+.
T Consensus 132 ~~~f~vdg--~~~~m~~GE~w~~d~~~~H~v~N~g~ 165 (290)
T 1e5r_A 132 LAFHSNED--TVIHMRPGEIWFLDAATVHSAVNFSE 165 (290)
T ss_dssp TEEEEETT--EEECCCTTEEEECCTTSCEEEEESSS
T ss_pred CcEEEECC--EEEecCCCCEEEEcCCCeeEEEcCCC
Confidence 34555666 57999999999999998888776554
No 292
>3ne0_A Resuscitation promoting factor interacting protei; cell WALL, peptidoglycan, hydrolase; 1.00A {Mycobacterium tuberculosis} PDB: 3pbc_A 3s0q_A 2xiv_A*
Probab=27.75 E-value=19 Score=23.34 Aligned_cols=13 Identities=15% Similarity=0.340 Sum_probs=10.5
Q ss_pred EECCCcEEEEcCC
Q 037642 37 EFGAGDLVTIPKG 49 (74)
Q Consensus 37 ~~~~GD~v~~p~g 49 (74)
.++|||+++|..|
T Consensus 158 ~lqpGDLvFf~~g 170 (214)
T 3ne0_A 158 QMRRGDVIFYGPN 170 (214)
T ss_dssp GCCTTCEEEESGG
T ss_pred hCCCCCEEEecCC
Confidence 4799999999643
No 293
>2hbw_A NLP/P60 protein; NLP/P60 family protein, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; HET: UNL; 1.05A {Anabaena variabilis} PDB: 2evr_A 2fg0_A
Probab=27.74 E-value=35 Score=22.24 Aligned_cols=13 Identities=38% Similarity=0.534 Sum_probs=10.8
Q ss_pred EECCCcEEEEcCC
Q 037642 37 EFGAGDLVTIPKG 49 (74)
Q Consensus 37 ~~~~GD~v~~p~g 49 (74)
.++|||+++|..+
T Consensus 160 ~l~pGDLvff~~~ 172 (235)
T 2hbw_A 160 ELAPGDLVFFGTP 172 (235)
T ss_dssp GCCTTCEEEEECS
T ss_pred hCCCCCEEEECCC
Confidence 3789999999754
No 294
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=27.55 E-value=82 Score=21.84 Aligned_cols=24 Identities=25% Similarity=0.076 Sum_probs=18.2
Q ss_pred EEECCCcEEEEcCCCeEEEEEeee
Q 037642 36 VEFGAGDLVTIPKGLSCTWDVSVA 59 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~~~~~~~ 59 (74)
..=+|||+|++++|.-|.-...+-
T Consensus 281 ~~QkpGd~Vi~~PgayH~v~n~G~ 304 (332)
T 2xxz_A 281 FVQRPGDLVWINAGTVHWVQATGW 304 (332)
T ss_dssp EEECTTCEEEECTTCEEEEEESSS
T ss_pred EEECCCCEEEECCCceEEEEecce
Confidence 445799999999998887554443
No 295
>1mi8_A DNAB intein; all beta-strands, hydrolase; 2.00A {Synechocystis SP} SCOP: b.86.1.2
Probab=27.06 E-value=82 Score=18.52 Aligned_cols=12 Identities=8% Similarity=0.462 Sum_probs=9.9
Q ss_pred ECCCcEEEEcCC
Q 037642 38 FGAGDLVTIPKG 49 (74)
Q Consensus 38 ~~~GD~v~~p~g 49 (74)
|++||.+.+|..
T Consensus 89 L~~GD~v~~~~~ 100 (158)
T 1mi8_A 89 LSLKEHIALPRK 100 (158)
T ss_dssp CCTTCEEEEECC
T ss_pred CCCCCEEEeccc
Confidence 688999999854
No 296
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=27.04 E-value=41 Score=17.61 Aligned_cols=25 Identities=28% Similarity=0.404 Sum_probs=16.0
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEeee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~~ 59 (74)
...+++||++.+ .+...+.|.....
T Consensus 18 eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 43 (80)
T 2pqh_A 18 EVTMKKGDILTLLNSTNKDWWKVEVN 43 (80)
T ss_dssp BCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred ccCCCCCCEEEEEEecCCCEEEEEEC
Confidence 478889998865 3434556665443
No 297
>1te7_A Hypothetical UPF0267 protein YQFB; alpha + beta, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli} SCOP: b.122.1.7
Probab=26.99 E-value=22 Score=20.13 Aligned_cols=26 Identities=23% Similarity=0.569 Sum_probs=18.0
Q ss_pred EEecEEEEEeCCCceEEEECCCcEEEE
Q 037642 20 LLKGKVKVYPKGSSDWVEFGAGDLVTI 46 (74)
Q Consensus 20 vleG~~~~~~~~g~e~~~~~~GD~v~~ 46 (74)
||+|.=+.+.....+ -..++||.+.+
T Consensus 16 Il~G~KT~T~R~~~e-~~~~~Gd~~~v 41 (103)
T 1te7_A 16 ILAGRKTITIRDESE-SHFKTGDVLRV 41 (103)
T ss_dssp HHTCCCEEEEECGGG-CCCCTTSEEEE
T ss_pred HHCCCCEEEEeCCCC-CCCCCCCEEEE
Confidence 567766666655423 46899999988
No 298
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=26.92 E-value=64 Score=17.90 Aligned_cols=26 Identities=19% Similarity=0.378 Sum_probs=20.1
Q ss_pred EEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecCCCC
Q 037642 36 VEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESTSSS 72 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~~~~ 72 (74)
..|..||+|++-.| .++|+.....|+
T Consensus 24 ~sLns~d~FILd~g-----------~~iyvW~G~~s~ 49 (104)
T 1kcq_A 24 ESFNNGDCFILDLG-----------NNIHQWCGSNSN 49 (104)
T ss_dssp GGCCTTSEEEEECS-----------SEEEEEECTTCC
T ss_pred HHcCCCCeEEEeCC-----------CEEEEEeCCCCC
Confidence 46889999999766 268888877765
No 299
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=26.33 E-value=55 Score=19.66 Aligned_cols=29 Identities=21% Similarity=0.195 Sum_probs=16.5
Q ss_pred EECCCcEEEEcCCCeEEEEEeeeEEEEEEEecCC
Q 037642 37 EFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESTS 70 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~~ 70 (74)
.|++||+++|.--.. .+.+.+++++.+.+
T Consensus 116 ~L~~GD~cvFeli~~-----~~~~f~V~IfR~~e 144 (146)
T 4i1k_A 116 NLGEGDVCVFELLRT-----RDFVLKVTAFRVNE 144 (146)
T ss_dssp TCCTTCEEEEEECSS-----SSCEEEEEEECCC-
T ss_pred CCCCCCEEEEEEecC-----CceEEEEEEEeccC
Confidence 477888887743322 12356777776653
No 300
>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A
Probab=25.87 E-value=23 Score=23.48 Aligned_cols=12 Identities=33% Similarity=0.498 Sum_probs=10.5
Q ss_pred EECCCcEEEEcC
Q 037642 37 EFGAGDLVTIPK 48 (74)
Q Consensus 37 ~~~~GD~v~~p~ 48 (74)
.++|||+++|+.
T Consensus 220 ~~~pGDLvff~~ 231 (306)
T 3npf_A 220 NVKRGDLVFFGR 231 (306)
T ss_dssp TCCTTCEEEEEE
T ss_pred cCCCccEEEECC
Confidence 579999999986
No 301
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=25.83 E-value=31 Score=23.70 Aligned_cols=23 Identities=13% Similarity=0.117 Sum_probs=15.7
Q ss_pred EEEeCCCceEEEECCCcEE-EEcCCC
Q 037642 26 KVYPKGSSDWVEFGAGDLV-TIPKGL 50 (74)
Q Consensus 26 ~~~~~~g~e~~~~~~GD~v-~~p~g~ 50 (74)
++.+.+. ...++|||.+ ++|.|.
T Consensus 35 ~~~~~~~--~~~y~~GD~l~v~p~N~ 58 (374)
T 1ddg_A 35 EIDLGDS--GLRYQPGDALGVWYQND 58 (374)
T ss_dssp EEECTTS--CCCCCTTCEEEECCCCC
T ss_pred EEEcCCC--CcccCCCCEEEEEcCCC
Confidence 3444443 3789999999 558874
No 302
>3eoj_A Bacteriochlorophyll A protein; excitation energy transfer, beta sheet, gamma-turns, chromophore, electron transport, magnesium; HET: BCL; 1.30A {Prosthecochloris aestuarii 2K} SCOP: b.75.1.1 PDB: 4bcl_A* 3oeg_A* 3vdi_A* 1m50_A* 3eni_A* 1ksa_A* 3bsd_A*
Probab=25.77 E-value=1.6e+02 Score=20.38 Aligned_cols=48 Identities=13% Similarity=0.090 Sum_probs=36.5
Q ss_pred EEEEEecEEEEEeCCCceEEEECCCcEEEEcCCCeEEEEEeeeEEEEEEE
Q 037642 17 TCYLLKGKVKVYPKGSSDWVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKF 66 (74)
Q Consensus 17 ~~~vleG~~~~~~~~g~e~~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~ 66 (74)
+.-=|++++.|..+.. ..++..||-.+-=...+|++...+.+...|-+
T Consensus 77 tknkl~vE~DIANEtk--drRiavGeG~vsVGdFSH~FsfEGsVvnm~Yy 124 (366)
T 3eoj_A 77 VKNTLNVEVDIANETK--DRRIAVGEGSLSVGDFSHSFSFEGSVVNMYYY 124 (366)
T ss_dssp EEEEEEEEEEEEESSS--SEEEEEEEEEEEETTEEEEEEEEEEEEEEESS
T ss_pred ccceeEEEEeeccCCC--cceeEeccceEEeccceeeEEeeeeEEEEEEe
Confidence 3344677777777774 57888888888888999999999998776643
No 303
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=25.70 E-value=1.1e+02 Score=17.90 Aligned_cols=12 Identities=42% Similarity=0.678 Sum_probs=8.2
Q ss_pred EEEECCCcEEEE
Q 037642 35 WVEFGAGDLVTI 46 (74)
Q Consensus 35 ~~~~~~GD~v~~ 46 (74)
.+++++||.|.+
T Consensus 23 ~i~V~~GDTV~f 34 (124)
T 3ef4_A 23 FVKVEAGDTVKF 34 (124)
T ss_dssp EEEECTTCEEEE
T ss_pred EEEECCCCEEEE
Confidence 367777777744
No 304
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=25.27 E-value=64 Score=15.51 Aligned_cols=24 Identities=17% Similarity=0.323 Sum_probs=15.9
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSV 58 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~ 58 (74)
...+++||++.+ .+...+.|....
T Consensus 17 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (58)
T 2bz8_A 17 ELTISVGEIITNIRKEDGGWWEGQI 41 (58)
T ss_dssp BCCBCTTCEEEEEECCTTTEEEEEE
T ss_pred EeeECCCCEEEEEEeCCCCEEEEEE
Confidence 478999999865 444455666543
No 305
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=24.92 E-value=24 Score=20.76 Aligned_cols=23 Identities=13% Similarity=0.189 Sum_probs=16.1
Q ss_pred EEEEeCCCceEEEECCCcEEEEcC
Q 037642 25 VKVYPKGSSDWVEFGAGDLVTIPK 48 (74)
Q Consensus 25 ~~~~~~~g~e~~~~~~GD~v~~p~ 48 (74)
++++.++. +-..+++||.+.|-.
T Consensus 23 iEiR~nd~-~~~~i~vGD~I~f~~ 45 (113)
T 1xne_A 23 IEVRVAYP-QLKDIKRGDKIIFND 45 (113)
T ss_dssp EEECCCTT-TTTTCCTTCEEEETT
T ss_pred EEEEecch-hhhccCCCCEEEEcc
Confidence 34555665 335689999999965
No 306
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=24.82 E-value=46 Score=16.32 Aligned_cols=23 Identities=17% Similarity=0.286 Sum_probs=16.2
Q ss_pred EEEECCCcEEEEcCCCeEEEEEe
Q 037642 35 WVEFGAGDLVTIPKGLSCTWDVS 57 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~~~~ 57 (74)
...+++||++.+-....+.|...
T Consensus 22 eLs~~~Gd~i~v~~~~~~Ww~g~ 44 (62)
T 2iim_A 22 DLGFEKGEQLRILEQSGEWWKAQ 44 (62)
T ss_dssp BCCBCTTCEEEEEECCSSEEEEE
T ss_pred CcCCCCCCEEEEEEcCCCEEEEE
Confidence 47889999987754445666655
No 307
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=24.38 E-value=37 Score=23.53 Aligned_cols=16 Identities=19% Similarity=0.594 Sum_probs=12.3
Q ss_pred EEECCCcEEEE-cCCCe
Q 037642 36 VEFGAGDLVTI-PKGLS 51 (74)
Q Consensus 36 ~~~~~GD~v~~-p~g~~ 51 (74)
..++|||.+.| |.|..
T Consensus 37 ~~Y~~GD~l~v~p~N~~ 53 (393)
T 4dql_A 37 ASYQEGDHLGVIPRNYE 53 (393)
T ss_dssp CCCCTTCEEEECCCCCH
T ss_pred CccCCCCEEEEEccCCH
Confidence 68999999954 77653
No 308
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=24.24 E-value=75 Score=15.70 Aligned_cols=22 Identities=27% Similarity=0.477 Sum_probs=12.9
Q ss_pred EEECCCcEEEE-cCCCeEEEEEe
Q 037642 36 VEFGAGDLVTI-PKGLSCTWDVS 57 (74)
Q Consensus 36 ~~~~~GD~v~~-p~g~~~~~~~~ 57 (74)
..+++||++.+ .+...+.|...
T Consensus 6 Ls~~~Gd~i~v~~~~~~~Ww~g~ 28 (63)
T 1tuc_A 6 VTMKKGDILTLLNSTNKDWWKVE 28 (63)
T ss_dssp CCBCTTCEEEEEECCSSSEEEEE
T ss_pred cCCCCCCEEEEEEecCCCEEEEE
Confidence 66778888755 33344455543
No 309
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=24.06 E-value=73 Score=18.38 Aligned_cols=12 Identities=33% Similarity=0.659 Sum_probs=8.2
Q ss_pred EEEECCCcEEEE
Q 037642 35 WVEFGAGDLVTI 46 (74)
Q Consensus 35 ~~~~~~GD~v~~ 46 (74)
.+++++||.|.|
T Consensus 22 ~i~V~~GdtV~f 33 (123)
T 1paz_A 22 YIKANPGDTVTF 33 (123)
T ss_dssp EEEECTTCEEEE
T ss_pred EEEECCCCEEEE
Confidence 367777777755
No 310
>1e0g_A Membrane-bound lytic murein transglycosylase D; cell WALL, hydrolase, glycosidase, lipoprotein, outer membrane, multigene family; NMR {Escherichia coli} SCOP: d.7.1.1
Probab=24.01 E-value=32 Score=15.87 Aligned_cols=12 Identities=25% Similarity=0.362 Sum_probs=8.4
Q ss_pred EECCCcEEEEcC
Q 037642 37 EFGAGDLVTIPK 48 (74)
Q Consensus 37 ~~~~GD~v~~p~ 48 (74)
.+.+|+.+.||.
T Consensus 36 ~l~~G~~l~ip~ 47 (48)
T 1e0g_A 36 NLQPGDKLTLFV 47 (48)
T ss_dssp GCCTTEEEECCC
T ss_pred cCCcCCEEEEec
Confidence 467777777774
No 311
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=23.95 E-value=35 Score=16.55 Aligned_cols=24 Identities=21% Similarity=0.206 Sum_probs=16.7
Q ss_pred EEEECCCcEEEEc-C-CCeEEEEEee
Q 037642 35 WVEFGAGDLVTIP-K-GLSCTWDVSV 58 (74)
Q Consensus 35 ~~~~~~GD~v~~p-~-g~~~~~~~~~ 58 (74)
...+++||++.+- + ...+.|....
T Consensus 18 eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 43 (60)
T 2v1q_A 18 ELTIKSGDKVYILDDKKSKDWWMCQL 43 (60)
T ss_dssp BCCBCTTCEEEEEESSSCSSEEEEEE
T ss_pred CccCCCCCEEEEEeCCCCCCCEEEEE
Confidence 4889999999763 3 3566676654
No 312
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=23.89 E-value=35 Score=24.37 Aligned_cols=25 Identities=24% Similarity=0.395 Sum_probs=16.9
Q ss_pred EEEEeCCCceEEEECCCcEEEE-cCCCe
Q 037642 25 VKVYPKGSSDWVEFGAGDLVTI-PKGLS 51 (74)
Q Consensus 25 ~~~~~~~g~e~~~~~~GD~v~~-p~g~~ 51 (74)
+++.+.+. .+.++|||.+.| |.|..
T Consensus 84 ie~dl~~s--~l~Y~~GD~l~V~p~N~~ 109 (458)
T 3qfs_A 84 LELDISDS--KIRYESGDHVAVYPANDS 109 (458)
T ss_dssp EEEECTTS--CCCCCTTCEEEECCCCCH
T ss_pred EEEEeCCC--CcccCCCCEEEEEeeCCH
Confidence 34555553 388999999955 77653
No 313
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=23.89 E-value=70 Score=15.26 Aligned_cols=25 Identities=20% Similarity=0.409 Sum_probs=16.3
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEeee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~~ 59 (74)
...+++||++.+ .+...+.|.....
T Consensus 19 eLs~~~Gd~i~v~~~~~~~W~~g~~~ 44 (58)
T 2drm_A 19 ELTFKEGDTIIVHQKDPAGWWEGELN 44 (58)
T ss_dssp BCCBCTTCEEEEEECCTTSEEEEEET
T ss_pred CcCCCCCCEEEEEEecCCCEEEEEEC
Confidence 478999999866 3344556665443
No 314
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=23.86 E-value=80 Score=16.03 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=13.9
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEe
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVS 57 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~ 57 (74)
...+++||++.+ .+...+.|...
T Consensus 15 eLs~~~Gd~i~v~~~~~~~Ww~g~ 38 (73)
T 2kxd_A 15 EVTMKKGDILTLLNSTNKDWWKVE 38 (73)
T ss_dssp CCCBCTTCEEEEEECCSSSEEEEE
T ss_pred EeeEcCCCEEEEEEecCCCEEEEE
Confidence 467788888855 33345555544
No 315
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=23.77 E-value=75 Score=22.17 Aligned_cols=26 Identities=23% Similarity=0.262 Sum_probs=21.2
Q ss_pred cEEEEEeCCCceEEEECCCcEEEEcCC
Q 037642 23 GKVKVYPKGSSDWVEFGAGDLVTIPKG 49 (74)
Q Consensus 23 G~~~~~~~~g~e~~~~~~GD~v~~p~g 49 (74)
..+.+..||. ....+.+||.+.|.+.
T Consensus 310 ~~~~vs~DG~-~~~~l~~gd~V~I~~s 335 (365)
T 3pfn_A 310 NTAWVSFDGR-KRQEIRHGDSISITTS 335 (365)
T ss_dssp SCEEEEETTE-EEEEECTTCEEEEEEC
T ss_pred CcEEEEEcCC-eeeecCCCCEEEEEEC
Confidence 3578889996 5689999999998665
No 316
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=23.70 E-value=74 Score=15.44 Aligned_cols=25 Identities=12% Similarity=0.125 Sum_probs=16.5
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEeee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~~ 59 (74)
...+++||++.+ .+...+.|.....
T Consensus 19 eLs~~~Gd~i~v~~~~~~~W~~g~~~ 44 (61)
T 1y0m_A 19 ELTFTKSAIIQNVEKQDGGWWRGDYG 44 (61)
T ss_dssp BCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred CcCCcCCCEEEEEEecCCCEEEEEEC
Confidence 478999999865 4445566665443
No 317
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=23.63 E-value=37 Score=19.40 Aligned_cols=26 Identities=27% Similarity=0.496 Sum_probs=19.6
Q ss_pred EEECCCcEEEEcCCCeEEEEEeeeEEEEEEEecCCCC
Q 037642 36 VEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESTSSS 72 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~~~~~~~~~k~y~~~~~~~~ 72 (74)
..|..||+|++-.| .++|+.....|+
T Consensus 34 ssLns~D~FILd~g-----------~~iyvW~G~~ss 59 (114)
T 1svq_A 34 SSLNSGDCFLLDAG-----------LTIYQFNGSKSS 59 (114)
T ss_dssp SSCCTTSEEEEEET-----------TEEEECCCTTCC
T ss_pred HHcCCCCeEEEecC-----------CEEEEEeCCCCC
Confidence 46888999999665 367887777665
No 318
>3d0f_A Penicillin-binding 1 transmembrane protein MRCA; BIG_1156.2, STR genomics, PSI-2, protein structure initiative; 1.64A {Nitrosomonas europaea atcc 19718}
Probab=23.51 E-value=24 Score=19.81 Aligned_cols=11 Identities=27% Similarity=0.582 Sum_probs=9.0
Q ss_pred ECCCcEEEEcC
Q 037642 38 FGAGDLVTIPK 48 (74)
Q Consensus 38 ~~~GD~v~~p~ 48 (74)
+++||++.+.+
T Consensus 84 l~~GdvI~V~~ 94 (106)
T 3d0f_A 84 IRPGALIRVKK 94 (106)
T ss_dssp CCTTEEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 78899998863
No 319
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=23.46 E-value=96 Score=18.37 Aligned_cols=26 Identities=12% Similarity=0.374 Sum_probs=19.8
Q ss_pred eEEEECCCcEEEE--c--CCCeEEEEEeee
Q 037642 34 DWVEFGAGDLVTI--P--KGLSCTWDVSVA 59 (74)
Q Consensus 34 e~~~~~~GD~v~~--p--~g~~~~~~~~~~ 59 (74)
.++.++.||.+.| | +.+-.+|.+...
T Consensus 35 ~tI~v~~Ge~~~I~L~~NPTTGY~W~~~~~ 64 (132)
T 2wgn_B 35 SPLKLTQGQELVLTLPSNPTTGFRWELRNP 64 (132)
T ss_dssp SCEEECTTCEEEEEECCCTTTSCEEEEEEC
T ss_pred cEEEEcCCCEEEEEeCCCCCCCeEEEEecC
Confidence 4699999999866 5 455788888764
No 320
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=23.37 E-value=77 Score=15.51 Aligned_cols=25 Identities=16% Similarity=0.338 Sum_probs=16.3
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEeee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~~ 59 (74)
...+++||++.+ .....+.|.....
T Consensus 22 eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 47 (64)
T 2ak5_A 22 ELSFSKGDVIHVTRVEEGGWWEGTHN 47 (64)
T ss_dssp BCCBCTTCEEEEEECCTTSEEEEEET
T ss_pred cccCCCCCEEEEeEecCCCEEEEEEC
Confidence 478899999866 3344556665443
No 321
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=23.06 E-value=78 Score=18.23 Aligned_cols=12 Identities=25% Similarity=0.493 Sum_probs=8.3
Q ss_pred EEEECCCcEEEE
Q 037642 35 WVEFGAGDLVTI 46 (74)
Q Consensus 35 ~~~~~~GD~v~~ 46 (74)
.+++++||.|.|
T Consensus 22 ~i~V~~GdtV~f 33 (123)
T 1pmy_A 22 LVRLKPGDSIKF 33 (123)
T ss_dssp EEEECTTCEEEE
T ss_pred EEEECCCCEEEE
Confidence 367777777755
No 322
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.91 E-value=63 Score=16.22 Aligned_cols=25 Identities=20% Similarity=0.319 Sum_probs=17.6
Q ss_pred EEEECCCcEEEEcC-CCeEEEEEeee
Q 037642 35 WVEFGAGDLVTIPK-GLSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~p~-g~~~~~~~~~~ 59 (74)
...+++||++.+-. ...+.|.....
T Consensus 24 eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 49 (71)
T 2dnu_A 24 EIGFEKGVTVEVIRKNLEGWWYIRYL 49 (71)
T ss_dssp BCCBCTTCEEEECCCCSSSEEEEEET
T ss_pred CCcCCCCCEEEEeECCCCCeEEEEEC
Confidence 48899999997743 35666766544
No 323
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=22.84 E-value=85 Score=18.24 Aligned_cols=23 Identities=17% Similarity=-0.004 Sum_probs=15.4
Q ss_pred eEEEECCCcEEEE-cCCCeEEEEE
Q 037642 34 DWVEFGAGDLVTI-PKGLSCTWDV 56 (74)
Q Consensus 34 e~~~~~~GD~v~~-p~g~~~~~~~ 56 (74)
+...+++||.+.| |.-...+...
T Consensus 83 ~~~~L~~GD~leLl~g~y~~~v~f 106 (110)
T 2brf_A 83 LEGSLGVGDTLYLVNGLHPLTLRW 106 (110)
T ss_dssp CEEEEETTCEEEEETTEEEEEEEE
T ss_pred CEEEecCCCEEEEccCCeEEEEEe
Confidence 4688999999976 5444444443
No 324
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=22.69 E-value=1e+02 Score=16.62 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=22.7
Q ss_pred CCcCCceEEEecCceEEEEEEecEEEEEeCCCceEEE
Q 037642 1 WGCSPGKFQLKFDAEETCYLLKGKVKVYPKGSSDWVE 37 (74)
Q Consensus 1 W~~~pg~~~~~~~~~E~~~vleG~~~~~~~~g~e~~~ 37 (74)
|...-|+|.. +.++.=+..|.+.+.-.+| ..+.
T Consensus 8 WtDrtG~F~V---eA~flg~~dgki~LhK~nG-v~I~ 40 (68)
T 2hbp_A 8 WVDRSGTFKV---DAEFIGCAKGKIHLHKANG-VKIA 40 (68)
T ss_dssp EEBSSSCCEE---EEEEEEEETTEEEEECTTS-CEEE
T ss_pred EEcCCCCeEE---EEEEEEEeCCEEEEEecCC-cEEE
Confidence 5555666655 4588888888888888777 3444
No 325
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=22.69 E-value=41 Score=21.92 Aligned_cols=15 Identities=20% Similarity=0.065 Sum_probs=12.9
Q ss_pred EEECCCcEEEEcCCC
Q 037642 36 VEFGAGDLVTIPKGL 50 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~ 50 (74)
..+.|||.+++|-..
T Consensus 190 ~~l~PG~~I~Vp~~~ 204 (236)
T 3p42_A 190 VEPPPGSQLWLGFSA 204 (236)
T ss_dssp EECCTTCEEEECBCT
T ss_pred CCCCCCCEEEEeCCc
Confidence 579999999999764
No 326
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=22.48 E-value=56 Score=18.72 Aligned_cols=21 Identities=29% Similarity=0.325 Sum_probs=14.3
Q ss_pred EEECCCcEEEEcCCCeEEEEE
Q 037642 36 VEFGAGDLVTIPKGLSCTWDV 56 (74)
Q Consensus 36 ~~~~~GD~v~~p~g~~~~~~~ 56 (74)
...+|||++.++.+.=--|-+
T Consensus 6 ~ep~pGDlI~~~r~~Y~H~gI 26 (125)
T 2lkt_A 6 QEPKPGDLIEIFRLGYEHWAL 26 (125)
T ss_dssp CCCCTTCEEEEECSSSCEEEE
T ss_pred CCCCCCCEEEEeCCCccEEEE
Confidence 357899999887765434443
No 327
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=22.42 E-value=49 Score=24.06 Aligned_cols=24 Identities=13% Similarity=0.119 Sum_probs=16.6
Q ss_pred EEEeCCCceEEEECCCcEE-EEcCCCe
Q 037642 26 KVYPKGSSDWVEFGAGDLV-TIPKGLS 51 (74)
Q Consensus 26 ~~~~~~g~e~~~~~~GD~v-~~p~g~~ 51 (74)
++.+.++ .+.++|||.+ ++|.|..
T Consensus 138 eld~~~~--~l~Y~~GD~l~V~P~N~~ 162 (539)
T 2qtl_A 138 ELDISNT--DFSYQPGDAFSVICPNSD 162 (539)
T ss_dssp EEECTTS--CCCCCTTCEEEEECCCCH
T ss_pred EEecCCC--CcCcCCCCEEEEEeCCCH
Confidence 3444553 3789999999 6688764
No 328
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=22.31 E-value=82 Score=18.09 Aligned_cols=11 Identities=36% Similarity=0.631 Sum_probs=6.8
Q ss_pred EEECCCcEEEE
Q 037642 36 VEFGAGDLVTI 46 (74)
Q Consensus 36 ~~~~~GD~v~~ 46 (74)
+++++||.|.|
T Consensus 23 i~V~~GdtV~f 33 (122)
T 2ux6_A 23 LKVAPGDTVTF 33 (122)
T ss_dssp EEECTTEEEEE
T ss_pred EEECCCCEEEE
Confidence 56666666644
No 329
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=22.29 E-value=27 Score=24.49 Aligned_cols=24 Identities=17% Similarity=0.417 Sum_probs=15.5
Q ss_pred EEeCCCceEEEECCCcEE-EEcCCCe
Q 037642 27 VYPKGSSDWVEFGAGDLV-TIPKGLS 51 (74)
Q Consensus 27 ~~~~~g~e~~~~~~GD~v-~~p~g~~ 51 (74)
+.+.+. ....++|||.+ ++|.|..
T Consensus 55 l~~~~~-~~~~Y~~GD~l~V~p~N~~ 79 (435)
T 1f20_A 55 LHTNGN-QELQYQPGDHLGVFPGNHE 79 (435)
T ss_dssp EECTTC-GGGCCCTTCEEEECCCCCH
T ss_pred EECCCC-CCCcCCCCCEEEEEecCCH
Confidence 444442 13789999999 4577654
No 330
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=22.17 E-value=57 Score=18.37 Aligned_cols=17 Identities=18% Similarity=0.321 Sum_probs=12.8
Q ss_pred ECCCcEEEEcCCCeEEE
Q 037642 38 FGAGDLVTIPKGLSCTW 54 (74)
Q Consensus 38 ~~~GD~v~~p~g~~~~~ 54 (74)
+++||++.|..|....|
T Consensus 60 l~~Gdvv~i~ng~v~~~ 76 (106)
T 2k75_A 60 LQDSDVVRIDNARVAQF 76 (106)
T ss_dssp CCTTEEEEEEEEEEEEE
T ss_pred cCCCCEEEEEeeEEeEE
Confidence 89999999886655444
No 331
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=22.09 E-value=1.1e+02 Score=17.38 Aligned_cols=15 Identities=13% Similarity=0.330 Sum_probs=10.7
Q ss_pred eEEEECCCcEEEEcC
Q 037642 34 DWVEFGAGDLVTIPK 48 (74)
Q Consensus 34 e~~~~~~GD~v~~p~ 48 (74)
+.+.+++||.+.+=+
T Consensus 77 ~~~~L~~GD~l~Ll~ 91 (102)
T 3kt9_A 77 QEVKLQPGQVLHMVN 91 (102)
T ss_dssp CEEEECTTCCEEEET
T ss_pred CeEEeCCCCEEEEcc
Confidence 468888888885533
No 332
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=22.07 E-value=78 Score=15.09 Aligned_cols=25 Identities=24% Similarity=0.443 Sum_probs=16.2
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEeee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~~ 59 (74)
...+++||++.+ .+...+.|.....
T Consensus 18 eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 43 (58)
T 1sem_A 18 ELAFKRGDVITLINKDDPNWWEGQLN 43 (58)
T ss_dssp BCCBCTTCEEEEEECSSSSEEEEEET
T ss_pred CcCCCCCCEEEEEEecCCCEEEEEEC
Confidence 478899999866 3344456665443
No 333
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=22.01 E-value=1.1e+02 Score=22.58 Aligned_cols=16 Identities=31% Similarity=0.534 Sum_probs=13.7
Q ss_pred EECCCcEEEEcCCCeE
Q 037642 37 EFGAGDLVTIPKGLSC 52 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~~ 52 (74)
++.+||++.+++|...
T Consensus 150 ~l~~GDiv~v~~Ge~I 165 (645)
T 3j08_A 150 EVAVGDIVIVRPGEKI 165 (645)
T ss_dssp GCCTTCEEEECTTCBC
T ss_pred HCCCCCEEEECCCCEE
Confidence 5899999999999754
No 334
>3rux_A BIRA bifunctional protein; biotin-protein ligase, ligase-ligase inhibitor complex; HET: BS5; 1.70A {Mycobacterium tuberculosis} PDB: 3l1a_A 3l2z_A 2cgh_A
Probab=21.77 E-value=66 Score=21.14 Aligned_cols=22 Identities=32% Similarity=0.466 Sum_probs=15.4
Q ss_pred cEEEEEeCCCceEEEECCCcEEEE
Q 037642 23 GKVKVYPKGSSDWVEFGAGDLVTI 46 (74)
Q Consensus 23 G~~~~~~~~g~e~~~~~~GD~v~~ 46 (74)
|...+..+++ ...+..||++.+
T Consensus 248 G~L~v~~~~g--~~~i~sGeV~~l 269 (270)
T 3rux_A 248 GRLCLDVGGR--TVVVSAGDVVHL 269 (270)
T ss_dssp SCEEEEETTE--EEEESSCEEEEC
T ss_pred CeEEEEECCC--EEEEEEEEEEEc
Confidence 5666776664 467888888764
No 335
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=21.75 E-value=80 Score=15.09 Aligned_cols=25 Identities=16% Similarity=0.359 Sum_probs=16.2
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEeee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~~ 59 (74)
...+++||.+.+ .+...+.|.....
T Consensus 17 eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 42 (58)
T 1uti_A 17 ELGFRSGEVVEVLDSSNPSWWTGRLH 42 (58)
T ss_dssp BCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred CCCCCCCCEEEEEEECCCCEEEEEEC
Confidence 478899999866 3444556665443
No 336
>2jv2_A Putative uncharacterized protein PH1500; AAA ATPase NC-domain-like, unknown function; NMR {Pyrococcus horikoshii}
Probab=21.62 E-value=96 Score=17.00 Aligned_cols=24 Identities=25% Similarity=0.383 Sum_probs=17.9
Q ss_pred EEECCCcEEEEc-CCCeEEEEEeee
Q 037642 36 VEFGAGDLVTIP-KGLSCTWDVSVA 59 (74)
Q Consensus 36 ~~~~~GD~v~~p-~g~~~~~~~~~~ 59 (74)
..+..||.+.++ -|....+.+.+.
T Consensus 40 rPV~~GD~I~i~~~G~~i~F~Vv~t 64 (83)
T 2jv2_A 40 KTVRTGDVIGISILGKEVKFKVVQA 64 (83)
T ss_dssp SEECTTCEEEEEETTEEEEEEEEEE
T ss_pred CCccCCCEEEEeeCCCEEEEEEEEe
Confidence 468999999998 776666666554
No 337
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=21.52 E-value=68 Score=15.46 Aligned_cols=24 Identities=17% Similarity=0.370 Sum_probs=15.6
Q ss_pred EEEECCCcEEEEc-CCCeEEEEEee
Q 037642 35 WVEFGAGDLVTIP-KGLSCTWDVSV 58 (74)
Q Consensus 35 ~~~~~~GD~v~~p-~g~~~~~~~~~ 58 (74)
...+++||++.+- +...+.|....
T Consensus 20 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 44 (59)
T 2g6f_X 20 ELSFSKGDVIHVTRVEEGGWWEGTH 44 (59)
T ss_dssp BCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred CcCCCCCCEEEEEEecCCCEEEEEE
Confidence 4788999998663 33455565543
No 338
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=21.47 E-value=73 Score=15.89 Aligned_cols=23 Identities=17% Similarity=0.491 Sum_probs=15.6
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEe
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVS 57 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~ 57 (74)
...+++||++.+ .+...+.|...
T Consensus 19 eLsf~~Gd~i~v~~~~~~~Ww~g~ 42 (67)
T 2bzy_A 19 ALALEVGDIVKVTRMNINGQWEGE 42 (67)
T ss_dssp BCCBCTTCEEEEEEECSSSEEEEE
T ss_pred ccccCCCCEEEEEEecCCCeEEEE
Confidence 478999999866 44455566543
No 339
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.47 E-value=30 Score=17.53 Aligned_cols=23 Identities=4% Similarity=0.107 Sum_probs=16.3
Q ss_pred EEEECCCcEEEEcCCCeEEEEEe
Q 037642 35 WVEFGAGDLVTIPKGLSCTWDVS 57 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g~~~~~~~~ 57 (74)
...+++||++.+-.-....|...
T Consensus 23 eLs~~~Gd~i~v~~~~~~Ww~~~ 45 (68)
T 1wxb_A 23 ELSVLKDEVLEVLEDGRQWWKLR 45 (68)
T ss_dssp BCCBCTTCEEEEEECSSSEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCEEEEE
Confidence 47888999887744446677765
No 340
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=21.45 E-value=64 Score=16.16 Aligned_cols=24 Identities=21% Similarity=0.206 Sum_probs=16.6
Q ss_pred EEEECCCcEEEEc-CC-CeEEEEEee
Q 037642 35 WVEFGAGDLVTIP-KG-LSCTWDVSV 58 (74)
Q Consensus 35 ~~~~~~GD~v~~p-~g-~~~~~~~~~ 58 (74)
...+++||++.+- +. ..+.|....
T Consensus 22 eLs~~~Gd~i~v~~~~~~~~Ww~g~~ 47 (71)
T 2jt4_A 22 ELTIKSGDKVYILDDKKSKDWWMCQL 47 (71)
T ss_dssp BCCBCTTCEEEEEESSSCSSEEEEEE
T ss_pred cccCCCCCEEEEEECCCCCCCEEEEE
Confidence 4889999999763 32 566676654
No 341
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=21.34 E-value=75 Score=18.54 Aligned_cols=12 Identities=33% Similarity=0.412 Sum_probs=8.5
Q ss_pred EEEECCCcEEEE
Q 037642 35 WVEFGAGDLVTI 46 (74)
Q Consensus 35 ~~~~~~GD~v~~ 46 (74)
.+++++||.|.|
T Consensus 24 ~i~V~~GDtVtf 35 (127)
T 3tu6_A 24 VIRAQPGDTVTF 35 (127)
T ss_dssp EEEECTTCEEEE
T ss_pred EEEECCCCEEEE
Confidence 367888887755
No 342
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=21.31 E-value=85 Score=15.25 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=16.3
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSV 58 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~ 58 (74)
...+++||++.+ .+...+.|....
T Consensus 17 eLs~~~Gd~i~v~~~~~~~Ww~g~~ 41 (65)
T 2oaw_A 17 EVTMKKGDILTLLNSTNKDWWKVEV 41 (65)
T ss_dssp BCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred CCCCCCCCEEEEEEcCCCCEEEEEE
Confidence 488999999966 444556666543
No 343
>2zjr_O 50S ribosomal protein L21; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.155.1.1 PDB: 1nwx_P* 1nwy_P* 1pnu_P 1pny_P 1sm1_P* 1vor_S 1vou_S 1vow_S 1voy_S 1vp0_S 1xbp_P* 1yl3_2 2b66_V 2b9n_V 2b9p_V 2zjp_O* 2zjq_O 1nkw_P 3cf5_O* 3dll_O* ...
Probab=21.07 E-value=11 Score=21.81 Aligned_cols=15 Identities=13% Similarity=0.364 Sum_probs=10.7
Q ss_pred eEEEECCCcEEEEcC
Q 037642 34 DWVEFGAGDLVTIPK 48 (74)
Q Consensus 34 e~~~~~~GD~v~~p~ 48 (74)
..+.+.+||.+.+++
T Consensus 10 kQykV~~Gd~i~vek 24 (100)
T 2zjr_O 10 KQYRVSEGDVIRVES 24 (100)
T ss_dssp CSCCSCCEEEEECCS
T ss_pred EEEEEeCCCEEEEcc
Confidence 457788888887753
No 344
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.05 E-value=97 Score=15.85 Aligned_cols=25 Identities=16% Similarity=0.145 Sum_probs=17.5
Q ss_pred EEEECCCcEEEEc--CCCeEEEEEeee
Q 037642 35 WVEFGAGDLVTIP--KGLSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~p--~g~~~~~~~~~~ 59 (74)
...+++||++.+- ....+.|.....
T Consensus 30 eLsf~~Gd~i~v~~~~~~~gWw~g~~~ 56 (75)
T 2ege_A 30 RLALRAGDVVMVYGPMDDQGFYYGELG 56 (75)
T ss_dssp BCCBCTTCEEEEESCCCTTCEEEEESS
T ss_pred cceECCCCEEEEeEccCCCCEEEEEEC
Confidence 4789999999653 466777775543
No 345
>1vct_A Hypothetical protein PH0236; helix rich, structural genomics, riken structural genomics/P initiative, RSGI, NPPSFA; 1.85A {Pyrococcus horikoshii} SCOP: a.7.12.1 d.286.1.1 PDB: 2bkn_A 2bko_A 2bkp_A
Probab=20.86 E-value=62 Score=20.16 Aligned_cols=29 Identities=17% Similarity=0.173 Sum_probs=18.2
Q ss_pred EEEEEEecEEEEEeCCCceEEEECCCcEEEE
Q 037642 16 ETCYLLKGKVKVYPKGSSDWVEFGAGDLVTI 46 (74)
Q Consensus 16 E~~~vleG~~~~~~~~g~e~~~~~~GD~v~~ 46 (74)
-+.-|.+|.-.+...++ ...+++||.+++
T Consensus 151 ~IvaI~R~g~~i~~P~~--dt~L~~GD~Liv 179 (205)
T 1vct_A 151 WIIAVRRGKRWIFGPNE--NFKIRAGDVLIG 179 (205)
T ss_dssp EEEEEEETTEEEESCCT--TCBCCTTCEEEE
T ss_pred EEEEEEECCEEEeCCCC--CCEECCCCEEEE
Confidence 34555565544434444 268999999976
No 346
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=20.83 E-value=1.2e+02 Score=22.72 Aligned_cols=16 Identities=31% Similarity=0.534 Sum_probs=13.7
Q ss_pred EECCCcEEEEcCCCeE
Q 037642 37 EFGAGDLVTIPKGLSC 52 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~~ 52 (74)
++.+||++.+++|...
T Consensus 228 ~l~~GDiv~v~~Ge~I 243 (723)
T 3j09_A 228 EVAVGDIVIVRPGEKI 243 (723)
T ss_dssp GCCTTCEEEECTTCBC
T ss_pred HCCCCCEEEECCCCEE
Confidence 5899999999999754
No 347
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=20.66 E-value=72 Score=16.98 Aligned_cols=12 Identities=8% Similarity=0.252 Sum_probs=8.0
Q ss_pred EEEECCCcEEEE
Q 037642 35 WVEFGAGDLVTI 46 (74)
Q Consensus 35 ~~~~~~GD~v~~ 46 (74)
.+++++||.|.|
T Consensus 18 ~i~v~~G~tV~~ 29 (99)
T 1plc_A 18 EFSISPGEKIVF 29 (99)
T ss_dssp EEEECTTCEEEE
T ss_pred EEEECCCCEEEE
Confidence 366777776665
No 348
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=20.54 E-value=47 Score=23.30 Aligned_cols=25 Identities=16% Similarity=0.023 Sum_probs=19.6
Q ss_pred CCceEEEECCCcEEEEcCCCeEEEE
Q 037642 31 GSSDWVEFGAGDLVTIPKGLSCTWD 55 (74)
Q Consensus 31 ~g~e~~~~~~GD~v~~p~g~~~~~~ 55 (74)
.......++|||+++|-...-|.-.
T Consensus 231 ~~~~ewd~epGDav~F~~~tlHga~ 255 (344)
T 3nnf_A 231 DGYEEDEYNLGDAFFFNKYVLHQSV 255 (344)
T ss_dssp TCEEECCBCTTCEEEEETTCEEEEC
T ss_pred hhhccccCCCCcEEEEecceeecCC
Confidence 3334567999999999888887766
No 349
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=20.52 E-value=65 Score=15.79 Aligned_cols=24 Identities=17% Similarity=0.437 Sum_probs=16.2
Q ss_pred EEEECCCcEEEEcC---CCeEEEEEee
Q 037642 35 WVEFGAGDLVTIPK---GLSCTWDVSV 58 (74)
Q Consensus 35 ~~~~~~GD~v~~p~---g~~~~~~~~~ 58 (74)
...+++||++.+-. +..+.|....
T Consensus 22 eLs~~~Gd~i~v~~~~~~~~~W~~g~~ 48 (64)
T 2jte_A 22 ELTFREGEIIHLISKETGEAGWWKGEL 48 (64)
T ss_dssp BCCBCTTCEEEEEESCSSSTTEEEEEE
T ss_pred ccCCCCCCEEEEEECCCCCCCEEEEEE
Confidence 48899999997742 2455666543
No 350
>3bbn_Q Ribosomal protein S17; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=20.34 E-value=37 Score=20.90 Aligned_cols=27 Identities=19% Similarity=0.385 Sum_probs=19.2
Q ss_pred EEECCCcEEEE----cCCCeEEEEEeeeEEE
Q 037642 36 VEFGAGDLVTI----PKGLSCTWDVSVAVDK 62 (74)
Q Consensus 36 ~~~~~GD~v~~----p~g~~~~~~~~~~~~k 62 (74)
..++.||.|.| |=.-.-.|.+.+-+.+
T Consensus 106 n~~kvGD~V~I~E~RPLSKtKrw~VveIvek 136 (142)
T 3bbn_Q 106 NQFKVGDVVRLEKSRPISKTKSFVALPVIAR 136 (142)
T ss_dssp CCCCTTEEEEEEECCCSSSSCCEEECCCSEE
T ss_pred CCCCCCCEEEEEEccCCCCcEEEEEEEEEec
Confidence 37999999999 5555567777665543
No 351
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=20.33 E-value=95 Score=15.43 Aligned_cols=25 Identities=24% Similarity=0.496 Sum_probs=16.9
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEeee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~~ 59 (74)
...+++||++.+ .+...+.|.....
T Consensus 24 eLs~~~Gd~i~v~~~~~~~Ww~g~~~ 49 (69)
T 2dil_A 24 ELDLSAGDILEVILEGEDGWWTVERN 49 (69)
T ss_dssp SCCBCTTCEEEEEECCSSSEEEEEET
T ss_pred ccCCCCCCEEEEEECCCCCEEEEEEC
Confidence 478999999966 3445566665544
No 352
>3e0e_A Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=20.29 E-value=22 Score=19.74 Aligned_cols=14 Identities=29% Similarity=0.598 Sum_probs=11.2
Q ss_pred EECCCcEEEEcCCCe
Q 037642 37 EFGAGDLVTIPKGLS 51 (74)
Q Consensus 37 ~~~~GD~v~~p~g~~ 51 (74)
.+++||.+.| .|..
T Consensus 63 ~i~~Gdvv~i-~g~v 76 (97)
T 3e0e_A 63 EVKKGDIAEV-SGYV 76 (97)
T ss_dssp CCCTTCEEEE-EEEE
T ss_pred ccCCCCEEEE-EEEE
Confidence 5889999999 6643
No 353
>2rqx_A PMRD, polymyxin B resistance protein; signaling protein; NMR {Klebsiella pneumoniae}
Probab=20.20 E-value=22 Score=20.16 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=19.4
Q ss_pred CceEEEEEEecEE-EEEeCCCce-EEEECCCcEEEEcC
Q 037642 13 DAEETCYLLKGKV-KVYPKGSSD-WVEFGAGDLVTIPK 48 (74)
Q Consensus 13 ~~~E~~~vleG~~-~~~~~~g~e-~~~~~~GD~v~~p~ 48 (74)
...-.+++|.|.. .+..+-. . ...+++||++.==+
T Consensus 13 k~~~~~lvL~gGaLkMIAEv~-s~~~~~k~GDlLsPL~ 49 (89)
T 2rqx_A 13 SASLCRVVLQSGALEMIAEIE-ACRLRLREGDKLTPLA 49 (89)
T ss_dssp SSSCEEEEEEETTEEEEEEEE-CSCCCCCTTCEEEECS
T ss_pred ccCeEEEEEeCchHHHHHHHh-hcccccccccccccch
Confidence 3455566666543 3332221 2 46899999986433
No 354
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=20.20 E-value=42 Score=17.20 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=16.3
Q ss_pred EEEECCCcEEEEcCC---CeEEEEEeee
Q 037642 35 WVEFGAGDLVTIPKG---LSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~p~g---~~~~~~~~~~ 59 (74)
...+++||++.+-.- ..+.|.....
T Consensus 18 eLs~~~Gd~i~vl~~~~~~~gWw~g~~~ 45 (69)
T 2ydl_A 18 ELTIKEGDIVTLINKDCIDVGWWEGELN 45 (69)
T ss_dssp BCCBCTTCEEEEEESCCSSTTEEEEEET
T ss_pred ccccCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 488999999977322 4556665443
No 355
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.19 E-value=71 Score=16.63 Aligned_cols=25 Identities=32% Similarity=0.335 Sum_probs=16.1
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEeee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSVA 59 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~~ 59 (74)
...+++||++.+ .+...+.|.....
T Consensus 24 eLs~~~Gd~i~vl~~~~~gWw~g~~~ 49 (80)
T 2ekh_A 24 EISFPAGVEVQVLEKQESGWWYVRFG 49 (80)
T ss_dssp SCCBCTTCEEEEEEECTTSEEEEEET
T ss_pred ccCcCCCCEEEEEEeCCCCeEEEEEC
Confidence 478889998855 3444556665543
No 356
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=20.15 E-value=76 Score=16.40 Aligned_cols=13 Identities=38% Similarity=0.396 Sum_probs=9.3
Q ss_pred EEEECCCcEEEEc
Q 037642 35 WVEFGAGDLVTIP 47 (74)
Q Consensus 35 ~~~~~~GD~v~~p 47 (74)
.+.+++||.+.|.
T Consensus 20 ~i~v~~Gd~V~~~ 32 (91)
T 1bxv_A 20 TIEIQAGDTVQWV 32 (91)
T ss_dssp EEEECTTCEEEEE
T ss_pred EEEECCCCEEEEE
Confidence 4678888877664
No 357
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=20.13 E-value=69 Score=15.25 Aligned_cols=24 Identities=17% Similarity=0.017 Sum_probs=15.0
Q ss_pred EEEECCCcEEEE-cCCCeEEEEEee
Q 037642 35 WVEFGAGDLVTI-PKGLSCTWDVSV 58 (74)
Q Consensus 35 ~~~~~~GD~v~~-p~g~~~~~~~~~ 58 (74)
...+++||++.+ .+...+.|....
T Consensus 17 eLs~~~Gd~i~v~~~~~~gW~~g~~ 41 (58)
T 1zuy_A 17 ELPLKKGDVIYITREEPSGWSLGKL 41 (58)
T ss_dssp BCCBCTTCEEEEEEECTTSEEEEEE
T ss_pred cCCCCCCCEEEEEEecCCCeEEEEE
Confidence 478899999866 333444555443
Done!