BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037643
         (332 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|B7ZCC9|GP112_MOUSE Probable G-protein coupled receptor 112 OS=Mus musculus GN=Gpr112
            PE=3 SV=1
          Length = 3073

 Score = 39.3 bits (90), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 11/129 (8%)

Query: 83   ISYIASFKWVA---LWLLSEVTYLILLLVLSILSTVTIAYSTASIYKTKDTTFKKAAAVV 139
            +S    F W+    ++ +S V Y  L+ ++++    T+     S+      T KK   ++
Sbjct: 2829 LSPTTPFCWIKDDHIFYISVVAYFCLIFLMNLSMFCTVLVQLTSVKSQSQKTRKKM--IL 2886

Query: 140  PELWKPVLITFLLVFAVTFVYDYILGPVLGLILRLLFLKRFAFLKIVIGVILTVLYIVVF 199
             +L   + +TFLL     F + +  GPV     R+ FL  FA    + G ++ V Y V+ 
Sbjct: 2887 NDLKGTISLTFLLGLTWGFAF-FAWGPV-----RIFFLYLFAICNTLQGFLIFVFYCVMK 2940

Query: 200  VYITLIWHV 208
              +   WH+
Sbjct: 2941 ESVREQWHM 2949


>sp|O01346|EGH_DROME Beta-1,4-mannosyltransferase egh OS=Drosophila melanogaster GN=egh
           PE=2 SV=1
          Length = 457

 Score = 32.3 bits (72), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 13/103 (12%)

Query: 105 LLLVLSILSTVTIAYSTASIYKTKDTTFKKAAAVVPELWKPVLITFLLVF-AVTFVYDYI 163
           LLL +S+ S VT+  ST++I           AA+ P +  P L+ F+  F A   +Y Y+
Sbjct: 345 LLLGISVYSWVTMPLSTSNII---------FAALYP-IPCPNLVDFVCAFIAAINIYMYV 394

Query: 164 LGPVLGLILRLLFLKRFAFLKIVIGVILTVLYIVVFVYITLIW 206
            G +    L    L  F FL  V+G + T+   VV   + +IW
Sbjct: 395 FGVIKSFSLYRFGL--FRFLACVLGAVCTIPVNVVIENVAVIW 435


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.331    0.145    0.417 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,016,494
Number of Sequences: 539616
Number of extensions: 4056491
Number of successful extensions: 15277
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 15240
Number of HSP's gapped (non-prelim): 104
length of query: 332
length of database: 191,569,459
effective HSP length: 118
effective length of query: 214
effective length of database: 127,894,771
effective search space: 27369480994
effective search space used: 27369480994
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)