Query 037643
Match_columns 332
No_of_seqs 108 out of 189
Neff 7.1
Searched_HMMs 13730
Date Mon Mar 25 04:20:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037643.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037643hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ewsa_ g.9.1.1 (A:) Alpha-def 54.6 1.2 8.8E-05 24.7 -0.0 24 299-322 3-28 (32)
2 d2coza1 b.34.10.1 (A:8-116) Ce 12.3 28 0.0021 25.2 0.7 13 295-307 72-84 (109)
3 d2e3ha1 b.34.10.1 (A:212-282) 11.2 20 0.0015 23.9 -0.4 12 296-307 49-60 (71)
4 d2cp0a1 b.34.10.1 (A:7-89) CLI 10.9 21 0.0015 24.6 -0.5 11 297-307 60-70 (83)
5 d2hqha1 b.34.10.1 (A:26-97) Dy 10.2 23 0.0017 23.7 -0.4 11 296-306 51-61 (72)
6 d1whka_ b.34.10.1 (A:) Restin- 8.9 30 0.0022 24.2 -0.3 12 296-307 62-73 (91)
7 d1whla_ b.34.10.1 (A:) Cylindr 8.5 29 0.0021 24.5 -0.5 12 296-307 67-78 (95)
8 d1whja_ b.34.10.1 (A:) Restin- 8.3 30 0.0022 24.7 -0.5 12 296-307 73-84 (102)
9 d1tova_ b.34.10.1 (A:) Cytoske 8.2 45 0.0033 23.5 0.5 13 295-307 66-78 (98)
10 d2e3ia1 b.34.10.1 (A:58-128) R 7.6 35 0.0025 22.7 -0.4 11 297-307 50-60 (71)
No 1
>d1ewsa_ g.9.1.1 (A:) Alpha-defensin rk-1 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=54.61 E-value=1.2 Score=24.66 Aligned_cols=24 Identities=21% Similarity=0.396 Sum_probs=19.9
Q ss_pred hhcccccc--ccccchhhhccCCccc
Q 037643 299 FVCKSYHD--ENFEDLYDAADDQKLS 322 (332)
Q Consensus 299 ~~CK~~~~--e~id~~~~~~~~~y~~ 322 (332)
++||++.+ |.||..++.+...|+.
T Consensus 3 csckkycdpwevidgscglfnskyic 28 (32)
T d1ewsa_ 3 CSCKKYCDPWEVIDGSCGLFNSKYIC 28 (32)
T ss_dssp SEEESSCCTTEEEEECCSSSSCSEEE
T ss_pred cccccccChhheeccccccccceeEE
Confidence 47999976 7899999988888863
No 2
>d2coza1 b.34.10.1 (A:8-116) Centrosome-associated protein 350 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.34 E-value=28 Score=25.21 Aligned_cols=13 Identities=38% Similarity=0.777 Sum_probs=10.2
Q ss_pred HHHHhhccccccc
Q 037643 295 TVIYFVCKSYHDE 307 (332)
Q Consensus 295 tV~Y~~CK~~~~e 307 (332)
-+-||.||..|+-
T Consensus 72 G~~YF~C~~~~Gi 84 (109)
T d2coza1 72 GIAYFECKEKHGI 84 (109)
T ss_dssp TEECCCCCSSCEE
T ss_pred CEEEEecCCCcEE
Confidence 3569999998873
No 3
>d2e3ha1 b.34.10.1 (A:212-282) CLIP-115 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.24 E-value=20 Score=23.90 Aligned_cols=12 Identities=25% Similarity=0.481 Sum_probs=9.1
Q ss_pred HHHhhccccccc
Q 037643 296 VIYFVCKSYHDE 307 (332)
Q Consensus 296 V~Y~~CK~~~~e 307 (332)
+=||+|+..|+-
T Consensus 49 ~~YF~c~~~~G~ 60 (71)
T d2e3ha1 49 TRYFQCQPKYGL 60 (71)
T ss_dssp EESCCCCTTCEE
T ss_pred EEEEecCCCCEE
Confidence 348999988873
No 4
>d2cp0a1 b.34.10.1 (A:7-89) CLIP170-related 59kda protein CLIPR-59 (1500005P14Rik) {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.94 E-value=21 Score=24.63 Aligned_cols=11 Identities=27% Similarity=0.703 Sum_probs=8.6
Q ss_pred HHhhccccccc
Q 037643 297 IYFVCKSYHDE 307 (332)
Q Consensus 297 ~Y~~CK~~~~e 307 (332)
=||+|+.+|+-
T Consensus 60 rYF~C~~~~G~ 70 (83)
T d2cp0a1 60 RYFICPPKQGL 70 (83)
T ss_dssp ECCCCSSSCEE
T ss_pred EEeecCCCceE
Confidence 38999988873
No 5
>d2hqha1 b.34.10.1 (A:26-97) Dynactin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.23 E-value=23 Score=23.68 Aligned_cols=11 Identities=36% Similarity=0.757 Sum_probs=8.3
Q ss_pred HHHhhcccccc
Q 037643 296 VIYFVCKSYHD 306 (332)
Q Consensus 296 V~Y~~CK~~~~ 306 (332)
+=||+|+..|+
T Consensus 51 ~~YF~C~~~~G 61 (72)
T d2hqha1 51 RKYFTCDEGHG 61 (72)
T ss_dssp EESSCCCTTTE
T ss_pred EEEEecCCCcE
Confidence 34888988776
No 6
>d1whka_ b.34.10.1 (A:) Restin-like protein 2, Rsnl2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.88 E-value=30 Score=24.22 Aligned_cols=12 Identities=33% Similarity=0.567 Sum_probs=9.8
Q ss_pred HHHhhccccccc
Q 037643 296 VIYFVCKSYHDE 307 (332)
Q Consensus 296 V~Y~~CK~~~~e 307 (332)
+-||+||..|+.
T Consensus 62 ~~YF~C~~~~G~ 73 (91)
T d1whka_ 62 KRYFTCKPNYGV 73 (91)
T ss_dssp EECCCCSTTCCC
T ss_pred EEEeecCCCceE
Confidence 459999998875
No 7
>d1whla_ b.34.10.1 (A:) Cylindromatosis tumour-suppressor Cyld {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.51 E-value=29 Score=24.48 Aligned_cols=12 Identities=17% Similarity=0.230 Sum_probs=9.2
Q ss_pred HHHhhccccccc
Q 037643 296 VIYFVCKSYHDE 307 (332)
Q Consensus 296 V~Y~~CK~~~~e 307 (332)
+-||+|+..|+-
T Consensus 67 ~rYF~C~~~~Gi 78 (95)
T d1whla_ 67 KQLFQCDEDCGV 78 (95)
T ss_dssp EECCCCCTTTEE
T ss_pred EEEEecCCCcEE
Confidence 458999988863
No 8
>d1whja_ b.34.10.1 (A:) Restin-like protein 2, Rsnl2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=8.27 E-value=30 Score=24.70 Aligned_cols=12 Identities=33% Similarity=0.534 Sum_probs=9.5
Q ss_pred HHHhhccccccc
Q 037643 296 VIYFVCKSYHDE 307 (332)
Q Consensus 296 V~Y~~CK~~~~e 307 (332)
+=||+||..|+-
T Consensus 73 ~~YF~C~~~~Gi 84 (102)
T d1whja_ 73 VQYFKCAPKYGI 84 (102)
T ss_dssp EECCCCCTTTEE
T ss_pred EEEeecCCCcEE
Confidence 459999988874
No 9
>d1tova_ b.34.10.1 (A:) Cytoskeleton-associated protein F53F4.3 {Caenorhabditis elegans [TaxId: 6239]}
Probab=8.18 E-value=45 Score=23.53 Aligned_cols=13 Identities=31% Similarity=0.493 Sum_probs=10.2
Q ss_pred HHHHhhccccccc
Q 037643 295 TVIYFVCKSYHDE 307 (332)
Q Consensus 295 tV~Y~~CK~~~~e 307 (332)
-+-||+|+..|+-
T Consensus 66 g~~YF~c~~~~G~ 78 (98)
T d1tova_ 66 GVRYFDCDPKYGG 78 (98)
T ss_dssp TEECSCCCTTSEE
T ss_pred CEEEEEcCCCCEE
Confidence 3559999999874
No 10
>d2e3ia1 b.34.10.1 (A:58-128) Restin {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.62 E-value=35 Score=22.70 Aligned_cols=11 Identities=27% Similarity=0.667 Sum_probs=8.2
Q ss_pred HHhhccccccc
Q 037643 297 IYFVCKSYHDE 307 (332)
Q Consensus 297 ~Y~~CK~~~~e 307 (332)
=||+|+..|+-
T Consensus 50 ~YF~c~~~~G~ 60 (71)
T d2e3ia1 50 RYFQCEPLKGI 60 (71)
T ss_dssp ESSCCSTTCEE
T ss_pred EEEecCCCcEE
Confidence 48889887763
Done!