Query 037646
Match_columns 377
No_of_seqs 393 out of 2021
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 04:22:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037646.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037646hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 1.4E-34 4.7E-39 269.5 13.3 196 39-238 8-217 (256)
2 3i3n_A Kelch-like protein 11; 100.0 7.5E-34 2.6E-38 267.8 14.5 194 41-237 11-224 (279)
3 3htm_A Speckle-type POZ protei 100.0 6.9E-31 2.4E-35 229.5 14.2 155 46-204 18-172 (172)
4 3t92_A Histone acetyltransfera 100.0 1.1E-29 3.9E-34 207.1 10.4 104 243-361 10-121 (121)
5 3p57_P Histone acetyltransfera 100.0 2.2E-28 7.5E-33 195.9 11.9 102 244-360 10-111 (112)
6 3hqi_A Speckle-type POZ protei 100.0 3.9E-28 1.3E-32 232.2 15.9 155 46-204 158-312 (312)
7 4eoz_A Speckle-type POZ protei 99.9 4.7E-28 1.6E-32 205.7 6.6 135 48-186 11-145 (145)
8 2if5_A Zinc finger and BTB dom 99.9 2.1E-25 7.3E-30 183.5 13.1 115 43-160 6-120 (120)
9 1r29_A B-cell lymphoma 6 prote 99.9 8.2E-25 2.8E-29 181.9 14.5 118 40-161 7-125 (127)
10 2ppi_A Gigaxonin; BTB domain, 99.9 2.8E-25 9.7E-30 188.9 10.8 119 39-160 24-144 (144)
11 2z8h_A Transcription regulator 99.9 6.5E-25 2.2E-29 185.3 12.3 123 40-168 14-137 (138)
12 1buo_A POZ domain, protein (pr 99.9 1.8E-24 6.2E-29 178.4 13.5 115 39-161 5-119 (121)
13 3b84_A Zinc finger and BTB dom 99.9 8.2E-25 2.8E-29 179.9 10.3 112 43-161 5-116 (119)
14 3ohu_A Transcription regulator 99.9 1.7E-25 6E-30 185.4 5.6 114 41-159 11-125 (125)
15 2vpk_A Myoneurin; transcriptio 99.9 2.3E-24 7.9E-29 176.3 12.1 111 43-160 3-115 (116)
16 2yy9_A Zinc finger and BTB dom 99.9 1E-24 3.4E-29 183.5 10.1 118 42-167 5-122 (135)
17 2vkp_A BTB/POZ domain-containi 99.9 3.5E-24 1.2E-28 173.0 9.6 103 56-161 2-107 (109)
18 2q81_A MIZ-1 protein; BTB/POZ 99.9 4.4E-24 1.5E-28 175.6 8.8 110 43-160 8-117 (119)
19 2ihc_A Transcription regulator 99.9 2.5E-24 8.6E-29 178.3 6.2 114 42-160 9-123 (124)
20 3ga1_A Nucleus accumbens-assoc 99.9 8.4E-24 2.9E-28 176.3 7.9 114 41-161 12-126 (129)
21 3fkc_A Transcriptional regulat 99.9 5.5E-22 1.9E-26 162.3 12.6 107 39-153 8-115 (116)
22 3m5b_A Zinc finger and BTB dom 99.9 1E-22 3.5E-27 167.5 7.1 102 46-161 16-117 (119)
23 2ast_A S-phase kinase-associat 99.5 9.2E-14 3.1E-18 119.6 9.4 114 65-182 3-147 (159)
24 4ajy_C Transcription elongatio 99.3 1E-11 3.5E-16 97.8 8.8 82 64-148 3-97 (97)
25 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 5.7E-11 1.9E-15 100.0 7.3 99 65-171 4-128 (141)
26 2p1m_A SKP1-like protein 1A; F 99.1 2.5E-11 8.5E-16 104.4 1.2 110 64-180 5-144 (160)
27 2eqx_A Kelch repeat and BTB do 99.0 2E-10 7E-15 91.6 4.3 76 163-238 7-91 (105)
28 1hv2_A Elongin C, ELC1; protei 98.7 5.8E-08 2E-12 76.4 7.7 81 64-148 5-99 (99)
29 2fnj_C Transcription elongatio 98.6 6.2E-08 2.1E-12 75.8 6.5 81 65-148 3-96 (96)
30 3v7d_A Suppressor of kinetocho 98.6 1.5E-07 5.2E-12 81.3 9.5 97 64-161 8-131 (169)
31 3drz_A BTB/POZ domain-containi 98.3 3.7E-06 1.3E-10 66.9 9.3 95 64-161 7-106 (107)
32 1vcb_B Protein (elongin C); tu 98.2 1.7E-06 5.7E-11 69.5 6.6 82 64-148 18-112 (112)
33 1l3e_B P300 protein; protein-p 98.2 2.3E-06 7.9E-11 66.8 7.0 80 250-339 20-99 (101)
34 3drx_A BTB/POZ domain-containi 97.2 0.00046 1.6E-08 60.6 6.3 95 64-161 13-112 (202)
35 3kvt_A Potassium channel prote 95.6 0.0063 2.2E-07 48.6 2.9 95 64-161 6-104 (115)
36 1s1g_A Potassium voltage-gated 95.1 0.028 9.7E-07 45.4 5.2 92 64-161 14-111 (124)
37 1t1d_A Protein (potassium chan 93.9 0.025 8.5E-07 44.0 2.3 85 65-152 3-90 (100)
38 1l3e_B P300 protein; protein-p 93.9 0.029 1E-06 43.5 2.6 58 283-341 16-80 (101)
39 2nz0_B Potassium voltage-gated 93.9 0.048 1.6E-06 45.1 4.0 82 64-151 36-121 (140)
40 1nn7_A Potassium channel KV4.2 93.3 0.03 1E-06 43.8 1.9 89 65-159 2-96 (105)
41 3t92_A Histone acetyltransfera 87.0 0.48 1.6E-05 37.9 3.5 49 287-339 17-67 (121)
42 2eqx_A Kelch repeat and BTB do 85.1 2.6 8.8E-05 32.4 6.9 65 128-196 7-83 (105)
43 2vkp_A BTB/POZ domain-containi 82.3 1.2 4.3E-05 33.9 4.0 33 163-195 76-108 (109)
44 3p57_P Histone acetyltransfera 79.5 4.2 0.00015 31.9 6.1 74 288-365 17-112 (112)
45 1r29_A B-cell lymphoma 6 prote 72.4 3.1 0.0001 32.8 3.7 33 163-195 94-126 (127)
46 2yy9_A Zinc finger and BTB dom 69.6 1.7 6E-05 34.8 1.6 36 163-198 86-121 (135)
47 2q81_A MIZ-1 protein; BTB/POZ 68.0 4.5 0.00016 31.4 3.8 40 154-193 76-117 (119)
48 3b84_A Zinc finger and BTB dom 66.8 2.6 8.9E-05 32.9 2.1 32 164-195 86-117 (119)
49 2r9r_B Paddle chimera voltage 65.9 5.2 0.00018 39.9 4.6 86 64-152 53-141 (514)
50 2vpk_A Myoneurin; transcriptio 65.5 5.2 0.00018 30.8 3.6 31 163-193 85-115 (116)
51 2if5_A Zinc finger and BTB dom 64.5 6.5 0.00022 30.4 4.0 30 163-192 90-119 (120)
52 1buo_A POZ domain, protein (pr 63.4 6.2 0.00021 30.7 3.7 31 164-194 89-119 (121)
53 2z8h_A Transcription regulator 63.2 1.8 6.3E-05 34.8 0.5 34 163-196 100-133 (138)
54 3htm_A Speckle-type POZ protei 53.2 12 0.0004 30.7 3.9 30 134-164 135-164 (172)
55 2ppi_A Gigaxonin; BTB domain, 51.9 6.3 0.00022 31.9 2.0 29 164-192 115-143 (144)
56 4eoz_A Speckle-type POZ protei 49.5 6.9 0.00023 31.2 1.8 33 164-196 91-123 (145)
57 3m5b_A Zinc finger and BTB dom 49.0 10 0.00036 29.5 2.8 31 164-194 87-117 (119)
58 2xk0_A Polycomb protein PCL; t 45.5 23 0.00079 24.9 3.7 14 14-27 3-16 (69)
59 3ga1_A Nucleus accumbens-assoc 42.2 4 0.00014 32.2 -0.8 33 163-195 95-127 (129)
60 3hqi_A Speckle-type POZ protei 37.6 26 0.00088 31.9 3.9 30 134-164 275-304 (312)
61 3r8n_R 30S ribosomal protein S 37.1 28 0.00097 23.4 3.0 23 347-369 30-52 (55)
62 3hve_A Gigaxonin; ubiquitin, c 33.1 26 0.00088 30.9 3.1 33 163-195 98-130 (256)
63 3i3n_A Kelch-like protein 11; 31.5 27 0.00093 31.2 3.0 42 154-195 95-138 (279)
64 2v8f_C MDIA1, profilin IIA; al 30.1 20 0.00067 19.9 1.0 8 15-22 2-9 (26)
65 4g9q_A 4-carboxymuconolactone 25.4 3.1E+02 0.011 24.5 8.9 97 87-184 18-126 (269)
66 2plx_B Peptide inhibitor; heli 25.4 87 0.003 16.9 3.0 21 171-191 3-23 (26)
67 1ego_A Glutaredoxin; electron 22.9 38 0.0013 23.6 1.9 15 302-316 9-23 (85)
68 2ast_A S-phase kinase-associat 22.9 80 0.0027 25.7 4.1 35 163-197 93-127 (159)
69 1aba_A Glutaredoxin; electron 22.8 38 0.0013 24.1 1.9 15 303-317 13-27 (87)
70 2ihc_A Transcription regulator 22.6 4.2 0.00014 31.9 -3.8 30 164-193 94-123 (124)
71 3i1m_R 30S ribosomal protein S 21.6 66 0.0023 23.1 2.8 24 347-370 49-72 (75)
72 3msz_A Glutaredoxin 1; alpha-b 21.5 41 0.0014 23.5 1.8 17 302-318 12-28 (89)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=1.4e-34 Score=269.51 Aligned_cols=196 Identities=17% Similarity=0.236 Sum_probs=165.7
Q ss_pred CCCCcccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCC--CCCcceEEecCCCHHHHH
Q 037646 39 LRGYSCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKG--HGRWRSLSIHGVPQDAVR 116 (377)
Q Consensus 39 ~~~~~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~--e~~~~~I~i~~v~~~af~ 116 (377)
......|+..+.+.++++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.+++. |+....|.++++++++|+
T Consensus 8 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~ 86 (256)
T 3hve_A 8 AVSDPQHAARLLRALSSFREESRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMR 86 (256)
T ss_dssp --CCTTTHHHHHHHHHTCCC--CCCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHH
T ss_pred ccCChHHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHH
Confidence 3456679999999999999999999999999 8999999999999999999999999876 667789999999999999
Q ss_pred HHHHHhhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCCChHHHHHHHHHHhcCCChHHHHHHHHHHHHhH
Q 037646 117 VFIRFLYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLLSTENVVDIFQLALLCDAPRLSLVCHRMILKNF 196 (377)
Q Consensus 117 ~lL~flYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~f 196 (377)
.+|+|+|||.+.++. +++.+++.+|++|+++.|+..|+++|.. .++++||+.++.+|..|+++.|.+.|.+||.+||
T Consensus 87 ~ll~~~Yt~~~~i~~--~~v~~ll~~A~~l~i~~l~~~c~~~L~~-~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 163 (256)
T 3hve_A 87 EILDYIFSGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFLEG-CIAAENCIGIRDFALHYCLHHVHYLATEYLETHF 163 (256)
T ss_dssp HHHHHHHHSCCCCC---CCHHHHHHHHHHHTCHHHHHHHHHHHHH-TCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHhhccCCCCcccH--hHHHHHHHHHHHHChHHHHHHHHHHHHh-hCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 999999999999998 9999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred HHHhCchhHhhcccc-----------CCCcHHHHHHHHHcc-ccchHHHHHHHH
Q 037646 197 KVVSDSEGWKAMMQS-----------HPVLEKELVESVLDE-DHKQKERIRKLK 238 (377)
Q Consensus 197 ~~v~~~~~F~~L~~~-----------~~~l~~evl~~~~~~-~~~~~~r~~~~~ 238 (377)
.++..+++|..|+.+ +...|.+||+++++| .++..+|.+++.
T Consensus 164 ~~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R~~~~~ 217 (256)
T 3hve_A 164 RDVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIRKVHMK 217 (256)
T ss_dssp HHHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CCSTTTHH
T ss_pred HHHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 999999999999865 244578899999999 666555655443
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=7.5e-34 Score=267.85 Aligned_cols=194 Identities=24% Similarity=0.274 Sum_probs=172.3
Q ss_pred CCcccHHHHHHHHHHHHhcCCCccEEEEec--CCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEec------CCCH
Q 037646 41 GYSCVSTAAKDLWERLFDSGYKADVTIYTD--YNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIH------GVPQ 112 (377)
Q Consensus 41 ~~~~~~~~l~~~l~~l~~~~~~sDV~~~v~--~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~------~v~~ 112 (377)
...+|++.+.+.++.++++|.+|||+|+++ +|+.|+|||.||+++|+||++||.+++.|+....|.++ ++++
T Consensus 11 ~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~ 90 (279)
T 3i3n_A 11 ECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEP 90 (279)
T ss_dssp ECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCH
T ss_pred CCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCH
Confidence 356799999999999999999999999994 38999999999999999999999999999999999998 8999
Q ss_pred HHHHHHHHHhhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCCChHHHHHHHHHHhcCCChHHHHHHHHHH
Q 037646 113 DAVRVFIRFLYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLLSTENVVDIFQLALLCDAPRLSLVCHRMI 192 (377)
Q Consensus 113 ~af~~lL~flYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l~~~n~~~il~~A~~~~~~~L~~~c~~~I 192 (377)
++|+.+|+|+|||.+.++. +++.+++.+|++|+++.|+..|+++|.+ .++++||+.++.+|..|+++.|.+.|.+||
T Consensus 91 ~~f~~ll~~~Ytg~~~i~~--~~v~~ll~~A~~l~i~~L~~~c~~~L~~-~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i 167 (279)
T 3i3n_A 91 DTVEAVIEYMYTGRIRVST--GSVHEVLELADRFLLIRLKEFCGEFLKK-KLHLSNCVAIHSLAHMYTLSQLALKAADMI 167 (279)
T ss_dssp HHHHHHHHHHHHSEEEEET--TTHHHHHHHHHHTTCHHHHHHHHHHHHH-HCCTTTHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhCcCCcccCH--HHHHHHHHHHHHHCcHHHHHHHHHHHHH-cCCcchHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 9999999999999999988 9999999999999999999999999999 899999999999999999999999999999
Q ss_pred HHhHHHHhCchhHhhcccc-----------CCCcHHHHHHHHHcc-ccchHHHHHHH
Q 037646 193 LKNFKVVSDSEGWKAMMQS-----------HPVLEKELVESVLDE-DHKQKERIRKL 237 (377)
Q Consensus 193 ~~~f~~v~~~~~F~~L~~~-----------~~~l~~evl~~~~~~-~~~~~~r~~~~ 237 (377)
.+||.++..+++|..|+.+ +...|.+||+++++| .++..+|.+++
T Consensus 168 ~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~~r~~~~ 224 (279)
T 3i3n_A 168 RRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYF 224 (279)
T ss_dssp HHTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHHHHTTTH
T ss_pred HHHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHHHHHHHH
Confidence 9999999999999999855 355699999999999 77766666544
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.97 E-value=6.9e-31 Score=229.55 Aligned_cols=155 Identities=23% Similarity=0.308 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHhhCC
Q 037646 46 STAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFLYSS 125 (377)
Q Consensus 46 ~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~flYtg 125 (377)
++++.+++.++++++.++||+|.+ +|+.|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|+|||
T Consensus 18 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~ 96 (172)
T 3htm_A 18 ECRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 96 (172)
T ss_dssp CCCHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCCcceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCC
Confidence 345788999999999999999999 8999999999999999999999999999998899999999999999999999999
Q ss_pred CccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCCChHHHHHHHHHHhcCCChHHHHHHHHHHHHhHHHHhCchh
Q 037646 126 CSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLLSTENVVDIFQLALLCDAPRLSLVCHRMILKNFKVVSDSEG 204 (377)
Q Consensus 126 ~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~f~~v~~~~~ 204 (377)
.+.++. +++.+|+.+|++|+++.|+..|+++|.. .++.+|++.++.+|..|+++.|.+.|.+||.+||.++..+++
T Consensus 97 ~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~~ 172 (172)
T 3htm_A 97 KAPNLD--KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETSG 172 (172)
T ss_dssp CCTTGG--GTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred CCCCcH--HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999888 9999999999999999999999999999 899999999999999999999999999999999999988764
No 4
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=99.96 E-value=1.1e-29 Score=207.05 Aligned_cols=104 Identities=29% Similarity=0.709 Sum_probs=93.4
Q ss_pred HHhHHHHHHHHHHHhhhcccccCCCCCCCCCCCCCCcchhhHhHHHHHHhhhccCCcCCCCChhHHHHHHHHHHHhhcCC
Q 037646 243 YLQLYEAMEALVHICRDGCKTIGPHDKDFKEDQAPCNYTACKGLELLVRHFAGCRLRIPGKCSHCKRMWQLLELHSRLCD 322 (377)
Q Consensus 243 y~ql~~~me~L~h~~~~~c~~~~p~~~~~~~~~~~c~~~~c~~l~~l~~H~~~c~~r~~~~c~~c~~~~~l~~~h~~~c~ 322 (377)
+.++.++|++|+|++. |+ .+.|.++.|.+||.|++|++.|+.|.+|||++|++||+||.+|+++|.
T Consensus 10 ~~~iq~~l~~L~HA~~--C~------------~~~C~~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C~ 75 (121)
T 3t92_A 10 RLSIQRAIQSLVHAAQ--CR------------NANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHCQ 75 (121)
T ss_dssp HHHHHHHHHHHHHHHH--CC------------CTTCCCHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcc--Cc------------CCCCCCchhHHHHHHHHHHHHccCCCCCCCCchHHHHHHHHHHHHhCC
Confidence 4567889999999977 87 357999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHc--------chhHHHHHHHHHHHHHHh
Q 037646 323 DSDVCRVPLCRNFKERIKKQS--------KKDEIKWKKLVEKMLRTK 361 (377)
Q Consensus 323 ~~~~c~vp~c~~~k~~~~~~~--------~~~~~~~~~~~~~~~~~~ 361 (377)
+++ |+||+|++||++|++++ +++|++|+|||+||+++|
T Consensus 76 ~~~-C~VP~C~~iK~~~~~qq~q~~~~~~~~~~~~~~~l~~~~~~~~ 121 (121)
T 3t92_A 76 ENK-CPVPFCLNIKQKLRQQQLEASIDLSAYIESGEEQLLSDLFAVK 121 (121)
T ss_dssp CTT-CCSTTHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHTC--
T ss_pred CCC-CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 987 99999999999999875 447999999999999875
No 5
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=99.95 E-value=2.2e-28 Score=195.91 Aligned_cols=102 Identities=26% Similarity=0.767 Sum_probs=86.5
Q ss_pred HhHHHHHHHHHHHhhhcccccCCCCCCCCCCCCCCcchhhHhHHHHHHhhhccCCcCCCCChhHHHHHHHHHHHhhcCCC
Q 037646 244 LQLYEAMEALVHICRDGCKTIGPHDKDFKEDQAPCNYTACKGLELLVRHFAGCRLRIPGKCSHCKRMWQLLELHSRLCDD 323 (377)
Q Consensus 244 ~ql~~~me~L~h~~~~~c~~~~p~~~~~~~~~~~c~~~~c~~l~~l~~H~~~c~~r~~~~c~~c~~~~~l~~~h~~~c~~ 323 (377)
.++...+++|+|++. |+ +++|.+++|++||.||+|+++|+.|++|||++|++||+|+++||++|++
T Consensus 10 ~~iq~~l~~L~HA~~--C~------------~~~C~~~~C~~mK~ll~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~~ 75 (112)
T 3p57_P 10 LSIQRCIQSLVHACQ--CR------------NANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQE 75 (112)
T ss_dssp HHHHHHHHHHHHHHH--CC------------CTTCCCTTHHHHHHHHTCTTCC-------CCCHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHcc--CC------------CCCCCChhhHHHHHHHHHHHHccCCCCCCCcccHHHHHHHHHHHHHcCC
Confidence 446677899999977 88 4699999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHcchhHHHHHHHHHHHHHH
Q 037646 324 SDVCRVPLCRNFKERIKKQSKKDEIKWKKLVEKMLRT 360 (377)
Q Consensus 324 ~~~c~vp~c~~~k~~~~~~~~~~~~~~~~~~~~~~~~ 360 (377)
++ |+||+|++||++|++++.+...+...++++.|++
T Consensus 76 ~~-C~VP~C~~iK~~~~q~q~q~r~~~~~~~rrr~a~ 111 (112)
T 3p57_P 76 NK-CPVPFCLNIKQKLRQQQLQHRLQQAQMLRRRMAS 111 (112)
T ss_dssp TT-CCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 65 9999999999999999999888888888887765
No 6
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.95 E-value=3.9e-28 Score=232.18 Aligned_cols=155 Identities=23% Similarity=0.308 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHhhCC
Q 037646 46 STAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFLYSS 125 (377)
Q Consensus 46 ~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~flYtg 125 (377)
++.+.++|..+++++.++||+|.+ +|+.|+|||.|||++|+||++||.+++.|+...+|.|+++++++|+.+|+|+|||
T Consensus 158 ~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~ 236 (312)
T 3hqi_A 158 ECRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTG 236 (312)
T ss_dssp CCCHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHS
T ss_pred CchHHHHHHHHHhCCCCCceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCC
Confidence 346889999999999999999999 8999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCCChHHHHHHHHHHhcCCChHHHHHHHHHHHHhHHHHhCchh
Q 037646 126 CSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLLSTENVVDIFQLALLCDAPRLSLVCHRMILKNFKVVSDSEG 204 (377)
Q Consensus 126 ~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~f~~v~~~~~ 204 (377)
.+.+.. +++.+|+.+|++|+++.|+..|+++|.. .++.+|++.++.+|..|++..|.+.|++||..||.+|..+++
T Consensus 237 ~~~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~g 312 (312)
T 3hqi_A 237 KAPNLD--KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETSG 312 (312)
T ss_dssp CCTTHH--HHHHHHHHHHHHTTCHHHHHHHHHHHHT-TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred CCCChH--HHHHHHHHHHHHhCHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 998877 9999999999999999999999999999 899999999999999999999999999999999999988764
No 7
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.94 E-value=4.7e-28 Score=205.65 Aligned_cols=135 Identities=24% Similarity=0.340 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHhhCCCc
Q 037646 48 AAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFLYSSCS 127 (377)
Q Consensus 48 ~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~flYtg~i 127 (377)
++.+++.++++++.++||+|.+ +|+.|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|+|||.+
T Consensus 11 ~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~ 89 (145)
T 4eoz_A 11 RLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKA 89 (145)
T ss_dssp CHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhCCCCcceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCcc
Confidence 4788999999999999999999 899999999999999999999999999888888999999999999999999999999
Q ss_pred cCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCCChHHHHHHHHHHhcCCChHHHH
Q 037646 128 EKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLLSTENVVDIFQLALLCDAPRLSL 186 (377)
Q Consensus 128 ~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l~~~n~~~il~~A~~~~~~~L~~ 186 (377)
.++. +++.+++.+|++|+++.|+..|+++|.+ .++.+|++.++.+|..|+++.|++
T Consensus 90 ~~~~--~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 90 PNLD--KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp TTGG--GTHHHHHHHHHHTTCHHHHHHHHCC----------------------------
T ss_pred CCcH--HHHHHHHHHHHHhCHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCHHHhcC
Confidence 9887 9999999999999999999999999999 899999999999999999998863
No 8
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.93 E-value=2.1e-25 Score=183.51 Aligned_cols=115 Identities=17% Similarity=0.218 Sum_probs=106.2
Q ss_pred cccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHh
Q 037646 43 SCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFL 122 (377)
Q Consensus 43 ~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~fl 122 (377)
.+|++.+.+.++++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.+++.|+....|.++++++++|+.+|+|+
T Consensus 6 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~ 84 (120)
T 2if5_A 6 PDHSSDILSGLNEQRTQGLLCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFA 84 (120)
T ss_dssp TTHHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcCCCCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHH
Confidence 468999999999999999999999999 8999999999999999999999999999988999999999999999999999
Q ss_pred hCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHh
Q 037646 123 YSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLE 160 (377)
Q Consensus 123 Ytg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~ 160 (377)
|||.+.++. +++.+++.+|++|+++.|++.|+++|.
T Consensus 85 Yt~~~~~~~--~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 85 YTATLTVST--ANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp HHSCCCCCG--GGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCCCCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 999999998 999999999999999999999999973
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.92 E-value=8.2e-25 Score=181.87 Aligned_cols=118 Identities=12% Similarity=0.222 Sum_probs=112.4
Q ss_pred CCCcccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEe-cCCCHHHHHHH
Q 037646 40 RGYSCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSI-HGVPQDAVRVF 118 (377)
Q Consensus 40 ~~~~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i-~~v~~~af~~l 118 (377)
.....|++.+.+.|+++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.+++.| ....|.| +++++++|+.+
T Consensus 7 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~l 84 (127)
T 1r29_A 7 IQFTRHASDVLLNLNRLRSRDILTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNIL 84 (127)
T ss_dssp CCCTTHHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHhcCCCCCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHH
Confidence 445679999999999999999999999999 89999999999999999999999999988 7789999 99999999999
Q ss_pred HHHhhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhh
Q 037646 119 IRFLYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEH 161 (377)
Q Consensus 119 L~flYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~ 161 (377)
|+|+|||.+.++. +++.+|+.+|++|+++.|++.|+++|.+
T Consensus 85 l~~~Ytg~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 85 LDFMYTSRLNLRE--GNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp HHHHHHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHcCCCcCcCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 9999999999988 9999999999999999999999999976
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.92 E-value=2.8e-25 Score=188.93 Aligned_cols=119 Identities=16% Similarity=0.228 Sum_probs=106.9
Q ss_pred CCCCcccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCC--CCcceEEecCCCHHHHH
Q 037646 39 LRGYSCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGH--GRWRSLSIHGVPQDAVR 116 (377)
Q Consensus 39 ~~~~~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e--~~~~~I~i~~v~~~af~ 116 (377)
......|++.+.+.|+++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.+++.+ +...+|.|+++++++|+
T Consensus 24 ~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~ 102 (144)
T 2ppi_A 24 AVSDPQHAARLLRALSSFREESRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMR 102 (144)
T ss_dssp CCCCTTHHHHHHHHHHHTTC--CCCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHH
T ss_pred eecCcchHHHHHHHHHHHHhcCCCcceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHH
Confidence 3456789999999999999999999999999 89999999999999999999999988765 56778999999999999
Q ss_pred HHHHHhhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHh
Q 037646 117 VFIRFLYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLE 160 (377)
Q Consensus 117 ~lL~flYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~ 160 (377)
.+|+|+|||.+.++. +++.+|+.+|++|+++.|++.|++||.
T Consensus 103 ~lL~fiYtg~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 103 EILDYIFSGQIRLNE--DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HHHHHHTTSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHHhCCCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 999999999999998 999999999999999999999998863
No 11
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.92 E-value=6.5e-25 Score=185.29 Aligned_cols=123 Identities=16% Similarity=0.124 Sum_probs=114.4
Q ss_pred CCCcccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEec-CCCHHHHHHH
Q 037646 40 RGYSCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIH-GVPQDAVRVF 118 (377)
Q Consensus 40 ~~~~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~-~v~~~af~~l 118 (377)
.....|++.+.+.|+++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.+++.+ ...|.++ ++++++|+.+
T Consensus 14 ~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~v~~~~~~~l 90 (138)
T 2z8h_A 14 YESSVHSTNVLLSLNDQRKKDVLCDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTDA--ELTVTLPEEVTVKGFEPL 90 (138)
T ss_dssp CCCSSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCCCT--TEEEECCTTSCHHHHHHH
T ss_pred ecCCchHHHHHHHHHHHHhhCCCcCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCCCC--CceEEeCCCCCHHHHHHH
Confidence 345579999999999999999999999999 89999999999999999999999998865 3578885 9999999999
Q ss_pred HHHhhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCCChHH
Q 037646 119 IRFLYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLLSTEN 168 (377)
Q Consensus 119 L~flYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l~~~n 168 (377)
|+|+|||.+.++. +++.+|+.+|++|+++.|++.|+++|.. .++.+|
T Consensus 91 L~~~Ytg~~~i~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~-~l~~sn 137 (138)
T 2z8h_A 91 IQFAYTAKLILSK--DNVDEVCRCVEFLSVHNIEESCFQFLKF-KFLDST 137 (138)
T ss_dssp HHHHHHSCCCCCT--TTHHHHHHHHHHHTCGGGHHHHHHHTTC-CCSCCC
T ss_pred HHHhcCCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHH-hccccc
Confidence 9999999999998 9999999999999999999999999999 788776
No 12
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.92 E-value=1.8e-24 Score=178.36 Aligned_cols=115 Identities=15% Similarity=0.199 Sum_probs=108.0
Q ss_pred CCCCcccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHH
Q 037646 39 LRGYSCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVF 118 (377)
Q Consensus 39 ~~~~~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~l 118 (377)
.....+|++.+.+.++++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.++ ..+|.++++++++|+.+
T Consensus 5 ~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~l 78 (121)
T 1buo_A 5 QLQNPSHPTGLLCKANQMRLAGTLCDVVIMV-DSQEFHAHRTVLACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQI 78 (121)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTTTCCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHH
T ss_pred eccCcchHHHHHHHHHHHHhcCCCCCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHH
Confidence 3456679999999999999999999999999 89999999999999999999999863 45799999999999999
Q ss_pred HHHhhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhh
Q 037646 119 IRFLYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEH 161 (377)
Q Consensus 119 L~flYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~ 161 (377)
|+|+|||.+.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 79 l~~~Ytg~~~~~~--~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 79 LEYAYTATLQAKA--EDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp HHHHHHSCCCCCG--GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHhhcCCCcCCCH--HHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 9999999999998 9999999999999999999999999986
No 13
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.91 E-value=8.2e-25 Score=179.95 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=105.0
Q ss_pred cccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHh
Q 037646 43 SCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFL 122 (377)
Q Consensus 43 ~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~fl 122 (377)
.+|++.+.+.++++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.+++ ...|.|+++++++|+.+|+|+
T Consensus 5 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~i 79 (119)
T 3b84_A 5 VQHSVRVLQELNKQREKGQYCDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFF 79 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHH
Confidence 468999999999999999999999999 899999999999999999999999865 567999999999999999999
Q ss_pred hCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhh
Q 037646 123 YSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEH 161 (377)
Q Consensus 123 Ytg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~ 161 (377)
|||.+.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 80 Ytg~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 80 YTGHLALTS--GNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp HHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred cCCCCccCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 999999998 9999999999999999999999999876
No 14
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.91 E-value=1.7e-25 Score=185.43 Aligned_cols=114 Identities=15% Similarity=0.095 Sum_probs=106.5
Q ss_pred CCcccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecC-CCHHHHHHHH
Q 037646 41 GYSCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHG-VPQDAVRVFI 119 (377)
Q Consensus 41 ~~~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~-v~~~af~~lL 119 (377)
....|++.+.+.++++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|+.+|
T Consensus 11 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l 87 (125)
T 3ohu_A 11 ESTVHCTNILLGLNDQRKKDILCDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLL 87 (125)
T ss_dssp ECSSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHHHhcCCccceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHH
Confidence 34569999999999999999999999999 89999999999999999999999998866 66899998 9999999999
Q ss_pred HHhhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHH
Q 037646 120 RFLYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQL 159 (377)
Q Consensus 120 ~flYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L 159 (377)
+|+|||.+.++. +++.+++.+|++|+++.|++.|++||
T Consensus 88 ~~iYtg~~~~~~--~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 88 QFAYTAKLLLSR--ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHTTSEEEECT--TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HhHcCCceEECH--HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 999999999998 99999999999999999999998753
No 15
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.91 E-value=2.3e-24 Score=176.31 Aligned_cols=111 Identities=17% Similarity=0.218 Sum_probs=104.5
Q ss_pred cccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEec--CCCHHHHHHHHH
Q 037646 43 SCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIH--GVPQDAVRVFIR 120 (377)
Q Consensus 43 ~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~--~v~~~af~~lL~ 120 (377)
..|++.+.+.++++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+
T Consensus 3 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~ 77 (116)
T 2vpk_A 3 SHHCEHLLERLNKQREAGFLCDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLE 77 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhcCCCCcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHH
Confidence 358999999999999999999999999 89999999999999999999999876 35568888 999999999999
Q ss_pred HhhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHh
Q 037646 121 FLYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLE 160 (377)
Q Consensus 121 flYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~ 160 (377)
|+|||.+.++. +++.+++.+|++|+++.|++.|+++|.
T Consensus 78 ~~Yt~~~~~~~--~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 78 FIYTGTLNLDS--WNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHcCCCcccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999988 999999999999999999999999985
No 16
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.91 E-value=1e-24 Score=183.49 Aligned_cols=118 Identities=14% Similarity=0.138 Sum_probs=103.3
Q ss_pred CcccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHH
Q 037646 42 YSCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRF 121 (377)
Q Consensus 42 ~~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~f 121 (377)
...|...+.+.|+++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.+++ ...|.|+++++++|+.+|+|
T Consensus 5 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~f 79 (135)
T 2yy9_A 5 SSGHSVRVLQELNKQREKGQYCDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDF 79 (135)
T ss_dssp --CHHHHHHHHHHHHHHTTTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHH
Confidence 4579999999999999999999999999 899999999999999999999999876 56799999999999999999
Q ss_pred hhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCCChH
Q 037646 122 LYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLLSTE 167 (377)
Q Consensus 122 lYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l~~~ 167 (377)
+|||.+.++. +++.+|+.+|++|+++.|++.|+++|.+ .+...
T Consensus 80 iYtg~~~i~~--~~v~~ll~~A~~l~i~~L~~~C~~~l~~-~l~~~ 122 (135)
T 2yy9_A 80 FYTGHLALTS--GNRDQVLLAAKELRVPEAVELCQSFQPQ-TSVGQ 122 (135)
T ss_dssp HHHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred HhCCCCCCCH--HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hccCC
Confidence 9999999998 9999999999999999999999999988 56543
No 17
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.90 E-value=3.5e-24 Score=173.04 Aligned_cols=103 Identities=25% Similarity=0.399 Sum_probs=92.7
Q ss_pred HHhcCCCccEEEEecCC---eEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHhhCCCccCCCh
Q 037646 56 LFDSGYKADVTIYTDYN---GIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFLYSSCSEKADM 132 (377)
Q Consensus 56 l~~~~~~sDV~~~v~~g---~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~flYtg~i~~~~~ 132 (377)
|++++.+|||+|.+++| +.|+|||.||+++|+||++||.+++.|+. ..|.++++++++|+.+|+|+|||.+.++.
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~- 79 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEA- 79 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT-
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCH-
Confidence 67899999999999554 89999999999999999999999999888 89999999999999999999999999998
Q ss_pred hhHHHHHHHHHhccCchhHHHHHHHHHhh
Q 037646 133 EDYVLHLLVLSHVFVVPQLKRECERQLEH 161 (377)
Q Consensus 133 ~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~ 161 (377)
+++.+++.+|++|+++.|++.|+++|.+
T Consensus 80 -~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 80 -DTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp -TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 9999999999999999999999999986
No 18
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.90 E-value=4.4e-24 Score=175.57 Aligned_cols=110 Identities=14% Similarity=0.145 Sum_probs=103.6
Q ss_pred cccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHh
Q 037646 43 SCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFL 122 (377)
Q Consensus 43 ~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~fl 122 (377)
..|++.+.+.++++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.++ ..+|.++++++++|+.+|+|+
T Consensus 8 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~ 81 (119)
T 2q81_A 8 PQHSQHVLEQLNQQRQLGLLCDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ-----KDVVHLDISNAAGLGQVLEFM 81 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC-----CSGGGGGGCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHHH
Confidence 468999999999999999999999999 88999999999999999999999862 356888999999999999999
Q ss_pred hCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHh
Q 037646 123 YSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLE 160 (377)
Q Consensus 123 Ytg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~ 160 (377)
|||.+.++. +++.+++.+|++|+++.|++.|++||.
T Consensus 82 Ytg~~~i~~--~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 82 YTAKLSLSP--ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHSCCCCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCCCCccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999999998 999999999999999999999999985
No 19
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.90 E-value=2.5e-24 Score=178.32 Aligned_cols=114 Identities=18% Similarity=0.171 Sum_probs=103.9
Q ss_pred CcccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEe-cCCCHHHHHHHHH
Q 037646 42 YSCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSI-HGVPQDAVRVFIR 120 (377)
Q Consensus 42 ~~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i-~~v~~~af~~lL~ 120 (377)
...|++.+.+.++++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.+++.++ ..|.+ .++++++|+.+|+
T Consensus 9 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~ 85 (124)
T 2ihc_A 9 SSVHSTNVLLSLNDQRKKDVLCDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQ 85 (124)
T ss_dssp CSSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhcCCCcCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHH
Confidence 4578999999999999999999999999 899999999999999999999999988653 57888 4999999999999
Q ss_pred HhhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHh
Q 037646 121 FLYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLE 160 (377)
Q Consensus 121 flYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~ 160 (377)
|+|||.+.++. +++.+|+.+|++|+++.|++.|+++|.
T Consensus 86 ~iYtg~~~i~~--~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 86 FAYTAKLILSK--ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHSEEEEET--TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HhcCCCcccCH--HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 99999999988 999999999999999999999998864
No 20
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.89 E-value=8.4e-24 Score=176.31 Aligned_cols=114 Identities=13% Similarity=0.152 Sum_probs=100.9
Q ss_pred CCcccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEec-CCCHHHHHHHH
Q 037646 41 GYSCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIH-GVPQDAVRVFI 119 (377)
Q Consensus 41 ~~~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~-~v~~~af~~lL 119 (377)
...+|++.+.+.++++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.++ ...+|.|+ ++++++|+.+|
T Consensus 12 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll 86 (129)
T 3ga1_A 12 EIPNFGNSILECLNEQRLQGLYCDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQIL 86 (129)
T ss_dssp ECTTHHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHH
T ss_pred ecCcHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHH
Confidence 34568999999999999999999999999 89999999999999999999999876 56789996 99999999999
Q ss_pred HHhhCCCccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhh
Q 037646 120 RFLYSSCSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEH 161 (377)
Q Consensus 120 ~flYtg~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~ 161 (377)
+|+|||.+.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 87 ~~iYtg~~~i~~--~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 87 SFCYTGRLSMNV--GDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp HHHHHSEEECCT--TTHHHHHHHHHHTTBTTSSCC-------
T ss_pred HHHhCCccccCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999998 9999999999999999999999999986
No 21
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.87 E-value=5.5e-22 Score=162.35 Aligned_cols=107 Identities=15% Similarity=0.152 Sum_probs=99.4
Q ss_pred CCCCcccHHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHH
Q 037646 39 LRGYSCVSTAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVF 118 (377)
Q Consensus 39 ~~~~~~~~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~l 118 (377)
.....+|++.+.+.++++++++.+|||+|.+ +|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+
T Consensus 8 ~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~ 81 (116)
T 3fkc_A 8 SATDIQYSGSLLNSLNEQRGHGLFCDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA-----GQVVELSFIRAEIFAEI 81 (116)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHH
T ss_pred eecCccHHHHHHHHHHHHHhcCCceeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHH
Confidence 3456779999999999999999999999999 89999999999999999999999875 46899999999999999
Q ss_pred HHHhhCCCc-cCCChhhHHHHHHHHHhccCchhHHH
Q 037646 119 IRFLYSSCS-EKADMEDYVLHLLVLSHVFVVPQLKR 153 (377)
Q Consensus 119 L~flYtg~i-~~~~~~~~v~~Ll~lA~~y~v~~L~~ 153 (377)
|+|+|||.+ .++. +++.+++.+|++|+++.|++
T Consensus 82 l~~~Ytg~~~~~~~--~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 82 LNYIYSSKIVRVRS--DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHTTSCCCSCCH--HHHHHHHHHHHHHTCHHHHT
T ss_pred HHhhcCCCcCCCCH--HHHHHHHHHHHHhCccccCc
Confidence 999999999 6887 99999999999999999874
No 22
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.87 E-value=1e-22 Score=167.50 Aligned_cols=102 Identities=19% Similarity=0.108 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHhcCCCccEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHhhCC
Q 037646 46 STAAKDLWERLFDSGYKADVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFLYSS 125 (377)
Q Consensus 46 ~~~l~~~l~~l~~~~~~sDV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~flYtg 125 (377)
+..+.+.++ +.++.+|||+|.+ +|+.|+|||.||+++|+||++ ....|.++++++++|+.+|+|+|||
T Consensus 16 ~~~~l~~l~--r~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg 83 (119)
T 3m5b_A 16 SDRLVQLAA--RLRPALCDTLITV-GSQEFPAHSLVLAGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGE 83 (119)
T ss_dssp TCHHHHHHH--HHTTTTCCEEEEE-TTEEEEECHHHHHTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTC
T ss_pred hHHHHHHHH--HhcCCCcceEEEE-CCEEEeeEHHHHHHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCC
Confidence 445666664 6779999999999 899999999999999999974 3567999999999999999999999
Q ss_pred CccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhh
Q 037646 126 CSEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEH 161 (377)
Q Consensus 126 ~i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~ 161 (377)
.+.++. +++.+++.+|++|+++.|++.|++++..
T Consensus 84 ~~~i~~--~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 84 SVELQP--GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp CEEECG--GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCcCH--HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 999998 9999999999999999999999999865
No 23
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.48 E-value=9.2e-14 Score=119.60 Aligned_cols=114 Identities=11% Similarity=0.182 Sum_probs=90.8
Q ss_pred EEEEecCCeEEehhHHHHhccCHHHHHhhcC-CCC-CCCcceEEecCCCHHHHHHHHHHhhCCC----------------
Q 037646 65 VTIYTDYNGIIYAHANVLGMASPVMKGMLNQ-SKG-HGRWRSLSIHGVPQDAVRVFIRFLYSSC---------------- 126 (377)
Q Consensus 65 V~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~-~~~-e~~~~~I~i~~v~~~af~~lL~flYtg~---------------- 126 (377)
|+|++.||+.|.+|+.+ |..|+||++||.+ ++. |+....|.|++|+..+++.+++|+|++.
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 78888799999999999 8999999999987 666 6667789999999999999999999987
Q ss_pred ----------ccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCC---ChHHHHHHHHHHhcCCCh
Q 037646 127 ----------SEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLL---STENVVDIFQLALLCDAP 182 (377)
Q Consensus 127 ----------i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l---~~~n~~~il~~A~~~~~~ 182 (377)
+.++. +++.+|+.+|+++++..|.+.|.+++.. .| +++.+-.++.+...+...
T Consensus 82 ~~i~~wD~~F~~id~--~~l~eLl~AAnyL~I~~Lld~~c~~va~-~i~gkt~eeir~~f~I~~d~t~e 147 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQ--GTLFELILAANYLDIKGLLDVTCKTVAN-MIKGKTPEEIRKTFNIKNDFTEE 147 (159)
T ss_dssp CCCCHHHHHHTCSCH--HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHSSCCHHHHHHHTTCCCCSCTT
T ss_pred hhhhHHHHHHHcCCH--HHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHcCCCCCCCHH
Confidence 45555 8999999999999999999999999966 45 455555555554444433
No 24
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.28 E-value=1e-11 Score=97.77 Aligned_cols=82 Identities=12% Similarity=0.177 Sum_probs=67.2
Q ss_pred cEEEEecCCeEEehhHHHHhccCHHHHHhhcC--CCCCCCcceEEecCCCHHHHHHHHHHhh-----C---CCcc---CC
Q 037646 64 DVTIYTDYNGIIYAHANVLGMASPVMKGMLNQ--SKGHGRWRSLSIHGVPQDAVRVFIRFLY-----S---SCSE---KA 130 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~--~~~e~~~~~I~i~~v~~~af~~lL~flY-----t---g~i~---~~ 130 (377)
-|+++..||+.|.+||.+ |..|+||++||.+ .+.|+....|.|+++++.+++.+++|+| + +.++ ++
T Consensus 3 ~v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~ 81 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 81 (97)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCC
T ss_pred EEEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCC
Confidence 367888899999999999 9999999999987 6677778899999999999999999999 5 5565 66
Q ss_pred ChhhHHHHHHHHHhccCc
Q 037646 131 DMEDYVLHLLVLSHVFVV 148 (377)
Q Consensus 131 ~~~~~v~~Ll~lA~~y~v 148 (377)
. +++.+|+.+|++++.
T Consensus 82 ~--~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 82 P--EIALELLMAANFLDC 97 (97)
T ss_dssp G--GGHHHHHHHHHHHTC
T ss_pred H--HHHHHHHHHHhhhCC
Confidence 6 999999999999863
No 25
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.15 E-value=5.7e-11 Score=99.97 Aligned_cols=99 Identities=9% Similarity=0.162 Sum_probs=83.6
Q ss_pred EEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHhhCCC------------------
Q 037646 65 VTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFLYSSC------------------ 126 (377)
Q Consensus 65 V~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~flYtg~------------------ 126 (377)
|++++.||+.|.+|+.+ |..|++|++||...- ...|.+++|+..+++.+++|+|+..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~ 78 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDD 78 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----CSSEECTTCCHHHHHHHHHHHHHHTTCC---------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhh
Confidence 78888899999999998 789999999997531 4579999999999999999999865
Q ss_pred --------ccCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCCChHHHHH
Q 037646 127 --------SEKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLLSTENVVD 171 (377)
Q Consensus 127 --------i~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l~~~n~~~ 171 (377)
+.++. +++.+|+.+|+++++.+|.+.|.+++.. .+...+.-+
T Consensus 79 i~~wD~~F~~vd~--~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~ee 128 (141)
T 1fs1_B 79 IPVWDQEFLKVDQ--GTLFELILAANYLDIKGLLDVTCKTVAN-MIKGKTPEE 128 (141)
T ss_dssp --HHHHHHTCSCH--HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTCCHHH
T ss_pred hhHHHHHHHhCCH--HHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHcCCCHHH
Confidence 33344 8899999999999999999999999987 565555443
No 26
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.06 E-value=2.5e-11 Score=104.38 Aligned_cols=110 Identities=8% Similarity=0.148 Sum_probs=61.7
Q ss_pred cEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHhhCCCc----------------
Q 037646 64 DVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFLYSSCS---------------- 127 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~flYtg~i---------------- 127 (377)
-|+|++.||+.|.+|+.+ |..|++|++||.... ....|.+++|+..+++.+++|+|+..-
T Consensus 5 ~v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 5 KIVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp ---CCC---------CHH-HHTCTTTC---------------CCTTSCHHHHHHHHHC----------------------
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 377777799999999998 789999999997642 345799999999999999999999762
Q ss_pred -----------cCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCC---ChHHHHHHHHHHhcCC
Q 037646 128 -----------EKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLL---STENVVDIFQLALLCD 180 (377)
Q Consensus 128 -----------~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l---~~~n~~~il~~A~~~~ 180 (377)
.++. +++.+|+.+|++++|.+|.++|.+++.. .| +++.+..++.+...+.
T Consensus 81 ~~i~~wD~~Fl~vd~--~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeir~~f~I~nd~t 144 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQ--ATLFELILAANYLNIKNLLDLTCQTVAD-MIKGKTPEEIRTTFNIKNDFT 144 (160)
T ss_dssp ----------------------CHHHHHHTTCHHHHHHHHHHHHH-TTTTCCHHHHHHHTTCCCCCC
T ss_pred chhhHHHHHHHcCCH--HHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHcCCCCCCC
Confidence 2333 7899999999999999999999999998 78 6666666655554443
No 27
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.00 E-value=2e-10 Score=91.60 Aligned_cols=76 Identities=12% Similarity=0.110 Sum_probs=68.0
Q ss_pred CCChHHHHHHHHHHhcCCChHHHHHHHHHHHHhHHHHhCchhHhhcccc--------CCCcHHHHHHHHHcc-ccchHHH
Q 037646 163 LLSTENVVDIFQLALLCDAPRLSLVCHRMILKNFKVVSDSEGWKAMMQS--------HPVLEKELVESVLDE-DHKQKER 233 (377)
Q Consensus 163 ~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~f~~v~~~~~F~~L~~~--------~~~l~~evl~~~~~~-~~~~~~r 233 (377)
.++++||+.++.+|+.|++++|.+.|.+||.+||.++.++++|..|+.+ +...|.+||+++++| .++..+|
T Consensus 7 ~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~sdv~~E~~vf~av~~Wv~~d~~~R 86 (105)
T 2eqx_A 7 GVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISDGVPCSQNPTEAIEAWINFNKEER 86 (105)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHTCEETTSCHHHHHHHHHHTTHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcCCCCCHHHHHHHHHHHHHcCHHHH
Confidence 6899999999999999999999999999999999999999999998854 456778899999999 7887778
Q ss_pred HHHHH
Q 037646 234 IRKLK 238 (377)
Q Consensus 234 ~~~~~ 238 (377)
.++++
T Consensus 87 ~~~~~ 91 (105)
T 2eqx_A 87 EAFAE 91 (105)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76653
No 28
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.66 E-value=5.8e-08 Score=76.37 Aligned_cols=81 Identities=15% Similarity=0.189 Sum_probs=68.2
Q ss_pred cEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCCCCCcceEEecCCCHHHHHHHHHHhhCCC--------------ccC
Q 037646 64 DVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKGHGRWRSLSIHGVPQDAVRVFIRFLYSSC--------------SEK 129 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~e~~~~~I~i~~v~~~af~~lL~flYtg~--------------i~~ 129 (377)
-|++...||..|.+++.+ |..|.+++.||..++ +.....|.+++++..+++.+++|+|... +.+
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 478888899999999997 789999999998765 5555789999999999999999998743 233
Q ss_pred CChhhHHHHHHHHHhccCc
Q 037646 130 ADMEDYVLHLLVLSHVFVV 148 (377)
Q Consensus 130 ~~~~~~v~~Ll~lA~~y~v 148 (377)
+. +.+.+|+.+|+++++
T Consensus 83 d~--~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PT--EMSLELLLAADYLSI 99 (99)
T ss_dssp CH--HHHHHHHHHHHHHCC
T ss_pred CH--HHHHHHHHHHHHhCc
Confidence 33 789999999998875
No 29
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.61 E-value=6.2e-08 Score=75.78 Aligned_cols=81 Identities=12% Similarity=0.179 Sum_probs=64.3
Q ss_pred EEEEecCCeEEehhHHHHhccCHHHHHhhcC--CCCCCCcceEEecCCCHHHHHHHHHHhhCCC-----------ccCCC
Q 037646 65 VTIYTDYNGIIYAHANVLGMASPVMKGMLNQ--SKGHGRWRSLSIHGVPQDAVRVFIRFLYSSC-----------SEKAD 131 (377)
Q Consensus 65 V~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~--~~~e~~~~~I~i~~v~~~af~~lL~flYtg~-----------i~~~~ 131 (377)
|+++..||..|.+++.+ |..|.+++.||.. .+.|.....|.+++++..+++.+++|+|... +.++.
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~ 81 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP 81 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCT
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCH
Confidence 67888899999999997 7899999999975 2345556789999999999999999998743 33444
Q ss_pred hhhHHHHHHHHHhccCc
Q 037646 132 MEDYVLHLLVLSHVFVV 148 (377)
Q Consensus 132 ~~~~v~~Ll~lA~~y~v 148 (377)
+.+.+|+.+|+++++
T Consensus 82 --~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 82 --EIALELLMAANFLDC 96 (96)
T ss_dssp --TTHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHHhCc
Confidence 889999999999875
No 30
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.60 E-value=1.5e-07 Score=81.30 Aligned_cols=97 Identities=8% Similarity=0.120 Sum_probs=75.1
Q ss_pred cEEEEecCCeEEehhHHHHhccCHHHHHhhcCCCC----CCCcceEEecCCCHHHHHHHHHHhhCCCccC----------
Q 037646 64 DVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSKG----HGRWRSLSIHGVPQDAVRVFIRFLYSSCSEK---------- 129 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~~----e~~~~~I~i~~v~~~af~~lL~flYtg~i~~---------- 129 (377)
-|+|+.+||..|.+++.+ |..|.+++.|+..... +.....|.|++|+..++..+++|+|...-..
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 588888899999999998 6789999999975322 1233689999999999999999997743210
Q ss_pred -------------CChhhHHHHHHHHHhccCchhHHHHHHHHHhh
Q 037646 130 -------------ADMEDYVLHLLVLSHVFVVPQLKRECERQLEH 161 (377)
Q Consensus 130 -------------~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~ 161 (377)
....+.+.+|+.+|++++|.+|.+.|.+.+..
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~ 131 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAE 131 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 11127788999999999999999999888854
No 31
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.28 E-value=3.7e-06 Score=66.92 Aligned_cols=95 Identities=6% Similarity=-0.021 Sum_probs=76.0
Q ss_pred cEEEEecCCeEEehhHHHHhccC-HHHHHhhcCCCC----CCCcceEEecCCCHHHHHHHHHHhhCCCccCCChhhHHHH
Q 037646 64 DVTIYTDYNGIIYAHANVLGMAS-PVMKGMLNQSKG----HGRWRSLSIHGVPQDAVRVFIRFLYSSCSEKADMEDYVLH 138 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S-~~F~~mf~~~~~----e~~~~~I~i~~v~~~af~~lL~flYtg~i~~~~~~~~v~~ 138 (377)
-|+|.| +|+.|...+..|+... .+|.+||.+... ....+++-| |-++..|+.+|+|+.+|.+..+.. -....
T Consensus 7 ~v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~-~~~~~ 83 (107)
T 3drz_A 7 WVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD-LAEEG 83 (107)
T ss_dssp EEEEEE-TTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTT-SCHHH
T ss_pred EEEEEE-CCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCC-CCHHH
Confidence 467788 9999999999998765 588999876421 113345655 679999999999999999987651 23578
Q ss_pred HHHHHhccCchhHHHHHHHHHhh
Q 037646 139 LLVLSHVFVVPQLKRECERQLEH 161 (377)
Q Consensus 139 Ll~lA~~y~v~~L~~~c~~~L~~ 161 (377)
++.-|.+|+++.|.+.|.+.|.+
T Consensus 84 l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHhc
Confidence 89999999999999999998865
No 32
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.25 E-value=1.7e-06 Score=69.50 Aligned_cols=82 Identities=12% Similarity=0.167 Sum_probs=64.1
Q ss_pred cEEEEecCCeEEehhHHHHhccCHHHHHhhcCC--CCCCCcceEEecCCCHHHHHHHHHHhhCCC-----------ccCC
Q 037646 64 DVTIYTDYNGIIYAHANVLGMASPVMKGMLNQS--KGHGRWRSLSIHGVPQDAVRVFIRFLYSSC-----------SEKA 130 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~--~~e~~~~~I~i~~v~~~af~~lL~flYtg~-----------i~~~ 130 (377)
-|+++..||..|.+.+.+ |..|..++.||... +.|.....|.|++|+..+++.+++|+|... +.++
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd 96 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 96 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccC
Confidence 578888899999999995 68999999999752 345555689999999999999999997633 2334
Q ss_pred ChhhHHHHHHHHHhccCc
Q 037646 131 DMEDYVLHLLVLSHVFVV 148 (377)
Q Consensus 131 ~~~~~v~~Ll~lA~~y~v 148 (377)
. +.+.+|+.+|+++++
T Consensus 97 ~--~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 97 P--EIALELLMAANFLDC 112 (112)
T ss_dssp H--HHHHHHHHHHHHHTC
T ss_pred H--HHHHHHHHHHHHhCc
Confidence 4 889999999998875
No 33
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=98.24 E-value=2.3e-06 Score=66.76 Aligned_cols=80 Identities=23% Similarity=0.552 Sum_probs=61.2
Q ss_pred HHHHHHHhhhcccccCCCCCCCCCCCCCCcchhhHhHHHHHHhhhccCCcCCCCChhHHHHHHHHHHHhhcCCCCCCCCC
Q 037646 250 MEALVHICRDGCKTIGPHDKDFKEDQAPCNYTACKGLELLVRHFAGCRLRIPGKCSHCKRMWQLLELHSRLCDDSDVCRV 329 (377)
Q Consensus 250 me~L~h~~~~~c~~~~p~~~~~~~~~~~c~~~~c~~l~~l~~H~~~c~~r~~~~c~~c~~~~~l~~~h~~~c~~~~~c~v 329 (377)
.-+|.|+.. |.....+. +....|..+.|..+|.|+.|...|+....-.-++|...++|+ .|.+.|.+.+ |+|
T Consensus 20 L~lL~HA~k--C~~~e~~~----g~~~~C~lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii-~H~k~C~~~~-CpV 91 (101)
T 1l3e_B 20 LVLLLHAHK--CQRREQAN----GEVRQCNLPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQII-SHWKNCTRHD-CPV 91 (101)
T ss_dssp HHHHHHHHH--HHHHHTTT----SSCCCCSCHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHH-HHHHHCCSSC-CTT
T ss_pred HHHHHHHHH--cCCccccC----CcCCCCCCCccHHHHHHHHHHHHccCCCCCCCCCCHHHHHHH-HHHHhCCCCC-CCc
Confidence 567889944 65322111 123589999999999999999999874455557899999998 5999999988 955
Q ss_pred CCCHHHHHHH
Q 037646 330 PLCRNFKERI 339 (377)
Q Consensus 330 p~c~~~k~~~ 339 (377)
|..+|+.+
T Consensus 92 --C~pvk~~~ 99 (101)
T 1l3e_B 92 --CLPLKNAG 99 (101)
T ss_dssp --HHHHHCCS
T ss_pred --CHHHHhhh
Confidence 99998654
No 34
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.23 E-value=0.00046 Score=60.59 Aligned_cols=95 Identities=6% Similarity=-0.021 Sum_probs=74.2
Q ss_pred cEEEEecCCeEEehhHHHHhccC-HHHHHhhcCCCC----CCCcceEEecCCCHHHHHHHHHHhhCCCccCCChhhHHHH
Q 037646 64 DVTIYTDYNGIIYAHANVLGMAS-PVMKGMLNQSKG----HGRWRSLSIHGVPQDAVRVFIRFLYSSCSEKADMEDYVLH 138 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S-~~F~~mf~~~~~----e~~~~~I~i~~v~~~af~~lL~flYtg~i~~~~~~~~v~~ 138 (377)
=|+|.| ||..|...+..|.... .+|..||.+... ....+.+-| |-++..|+.+|+|+-+|.+..+.. -....
T Consensus 13 ~V~LNV-GG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~-~~~~~ 89 (202)
T 3drx_A 13 WVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKD-LAEEG 89 (202)
T ss_dssp EEEEEE-TTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTT-SCHHH
T ss_pred EEEEEE-CCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCC-CCHHH
Confidence 366788 8999999999998754 478889876421 112345555 568999999999999999987652 23467
Q ss_pred HHHHHhccCchhHHHHHHHHHhh
Q 037646 139 LLVLSHVFVVPQLKRECERQLEH 161 (377)
Q Consensus 139 Ll~lA~~y~v~~L~~~c~~~L~~ 161 (377)
++.-|.+|+|+.|.+.|.+.|..
T Consensus 90 l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 90 VLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcHHHHHHHHHHHHH
Confidence 89999999999999999998875
No 35
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.60 E-value=0.0063 Score=48.65 Aligned_cols=95 Identities=6% Similarity=-0.152 Sum_probs=67.2
Q ss_pred cEEEEecCCeEEehhHHHHhccC-HHHHHhhcCCC-CCCCcceEEecCCCHHHHHHHHHHhhCCCccCCChhhHHHHHHH
Q 037646 64 DVTIYTDYNGIIYAHANVLGMAS-PVMKGMLNQSK-GHGRWRSLSIHGVPQDAVRVFIRFLYSSCSEKADMEDYVLHLLV 141 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S-~~F~~mf~~~~-~e~~~~~I~i~~v~~~af~~lL~flYtg~i~~~~~~~~v~~Ll~ 141 (377)
=|+|.| ||..|...+..|.... ..|.+|+.+.. .....+++-| |=++..|..+|+|+.+|.+..+.. ..+..++.
T Consensus 6 ~V~LNV-GG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~-~~~~~~~~ 82 (115)
T 3kvt_A 6 RVIINV-GGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTD-VCGPLFEE 82 (115)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSS-SCHHHHHH
T ss_pred EEEEEE-CCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCc-ccHHHHHH
Confidence 377888 8999999999998653 34556665421 1123455655 468999999999999999977652 24678899
Q ss_pred HHhccCchhHHH--HHHHHHhh
Q 037646 142 LSHVFVVPQLKR--ECERQLEH 161 (377)
Q Consensus 142 lA~~y~v~~L~~--~c~~~L~~ 161 (377)
-|.+|+|+...- -|...+.+
T Consensus 83 Ea~fy~i~~~~l~~CC~~~~~~ 104 (115)
T 3kvt_A 83 ELEFWGLDSNQVEPCCWMTYTA 104 (115)
T ss_dssp HHHHHTCCGGGBCGGGSHHHHS
T ss_pred HHHHhCCChHHHHHHHHHHHHh
Confidence 999999987532 24444444
No 36
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.07 E-value=0.028 Score=45.43 Aligned_cols=92 Identities=5% Similarity=-0.006 Sum_probs=64.8
Q ss_pred cEEEEecCCeEEehhHHHHhccCHHHHHhhcCC----CCCCCcceEEecCCCHHHHHHHHHHhhCCCccCCChhhHHHHH
Q 037646 64 DVTIYTDYNGIIYAHANVLGMASPVMKGMLNQS----KGHGRWRSLSIHGVPQDAVRVFIRFLYSSCSEKADMEDYVLHL 139 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~----~~e~~~~~I~i~~v~~~af~~lL~flYtg~i~~~~~~~~v~~L 139 (377)
=|+|.| ||..|..-+..|.... ..+|... ......+.+-| |=++..|+.+|+|+-+|.+..+.. ..+..+
T Consensus 14 ~V~LNV-GG~~F~t~~~TL~~~p---~S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~-~~~~~l 87 (124)
T 1s1g_A 14 LIVLNV-SGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY-ECISAY 87 (124)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTST---TSSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTT-SCHHHH
T ss_pred EEEEEe-CCEEEEEeHHHHhcCC---CceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCC-cCHHHH
Confidence 477888 9999999999997543 2334321 11123445655 459999999999999999987652 257889
Q ss_pred HHHHhccCchhH--HHHHHHHHhh
Q 037646 140 LVLSHVFVVPQL--KRECERQLEH 161 (377)
Q Consensus 140 l~lA~~y~v~~L--~~~c~~~L~~ 161 (377)
+.-|++|+|+.+ ...|...+.+
T Consensus 88 ~~Ea~fy~i~~l~l~~cC~~~~~~ 111 (124)
T 1s1g_A 88 DDELAFYGILPEIIGDCCYEEYKD 111 (124)
T ss_dssp HHHHHHTTCCGGGBCHHHHHHHHH
T ss_pred HHHHHHcCCChHHHHHHHHHHHHH
Confidence 999999999886 3445544443
No 37
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=93.94 E-value=0.025 Score=43.95 Aligned_cols=85 Identities=6% Similarity=-0.083 Sum_probs=59.9
Q ss_pred EEEEecCCeEEehhHHHHhccC-HHHHHhhcCC-CCCCCcceEEecCCCHHHHHHHHHHhhC-CCccCCChhhHHHHHHH
Q 037646 65 VTIYTDYNGIIYAHANVLGMAS-PVMKGMLNQS-KGHGRWRSLSIHGVPQDAVRVFIRFLYS-SCSEKADMEDYVLHLLV 141 (377)
Q Consensus 65 V~~~v~~g~~~~aHr~ILaa~S-~~F~~mf~~~-~~e~~~~~I~i~~v~~~af~~lL~flYt-g~i~~~~~~~~v~~Ll~ 141 (377)
|+|.| +|..|...+..|...- ..+.+|+... ......+++-| |=++..|+.+|+|+-+ |++..+.. ..+..++.
T Consensus 3 v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~-~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINV-SGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVN-VPLDVFSE 79 (100)
T ss_dssp EEEEE-TTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTT-SCHHHHHH
T ss_pred EEEEE-CCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCC-CCHHHHHH
Confidence 67889 8999999999996542 1233333210 11123455666 5689999999999998 89877652 35678999
Q ss_pred HHhccCchhHH
Q 037646 142 LSHVFVVPQLK 152 (377)
Q Consensus 142 lA~~y~v~~L~ 152 (377)
-|.+|+|+.+.
T Consensus 80 Ea~fy~i~~~~ 90 (100)
T 1t1d_A 80 EIKFYELGENA 90 (100)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHHcCCCHHH
Confidence 99999998754
No 38
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=93.91 E-value=0.029 Score=43.48 Aligned_cols=58 Identities=26% Similarity=0.578 Sum_probs=45.3
Q ss_pred hHhHHHHHHhhhccCCcC--C---CCC--hhHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHH
Q 037646 283 CKGLELLVRHFAGCRLRI--P---GKC--SHCKRMWQLLELHSRLCDDSDVCRVPLCRNFKERIKK 341 (377)
Q Consensus 283 c~~l~~l~~H~~~c~~r~--~---~~c--~~c~~~~~l~~~h~~~c~~~~~c~vp~c~~~k~~~~~ 341 (377)
-+.=-.|++|...|..|- + +.| ++|..|-.||. |-..|+....|.+|.|...|+-+.-
T Consensus 16 iqqqL~lL~HA~kC~~~e~~~g~~~~C~lp~C~~mK~ll~-Hm~~C~~g~~C~~~~C~sSr~ii~H 80 (101)
T 1l3e_B 16 IQQQLVLLLHAHKCQRREQANGEVRQCNLPHCRTMKNVLN-HMTHCQSGKSCQVAHCASSRQIISH 80 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSCCCCSCHHHHHHHHHHH-HHTTCCSCSSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccccCCcCCCCCCCccHHHHHHHH-HHHHccCCCCCCCCCCHHHHHHHHH
Confidence 344457899999998653 2 357 78999988865 9999999666999999988876653
No 39
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=93.85 E-value=0.048 Score=45.06 Aligned_cols=82 Identities=5% Similarity=-0.021 Sum_probs=60.5
Q ss_pred cEEEEecCCeEEehhHHHHhccCHHHHHhhcCCC----CCCCcceEEecCCCHHHHHHHHHHhhCCCccCCChhhHHHHH
Q 037646 64 DVTIYTDYNGIIYAHANVLGMASPVMKGMLNQSK----GHGRWRSLSIHGVPQDAVRVFIRFLYSSCSEKADMEDYVLHL 139 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~----~e~~~~~I~i~~v~~~af~~lL~flYtg~i~~~~~~~~v~~L 139 (377)
=|+|.| ||..|...+..|.... ..||.... .....+++-| |=++..|+.+|+|+-+|.+..+.. ..+..+
T Consensus 36 ~V~LNV-GG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~-~~~~~l 109 (140)
T 2nz0_B 36 LIVLNV-SGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY-ECISAY 109 (140)
T ss_dssp EEEEEE-TTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTT-SCHHHH
T ss_pred EEEEEE-CCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCC-cCHHHH
Confidence 578888 9999999999997543 23443310 1123345555 459999999999999999987652 247889
Q ss_pred HHHHhccCchhH
Q 037646 140 LVLSHVFVVPQL 151 (377)
Q Consensus 140 l~lA~~y~v~~L 151 (377)
+.-|++|+|+.+
T Consensus 110 ~eEa~fy~i~~l 121 (140)
T 2nz0_B 110 DDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHTCCGG
T ss_pred HHHHHHcCCChH
Confidence 999999999886
No 40
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=93.35 E-value=0.03 Score=43.84 Aligned_cols=89 Identities=10% Similarity=0.044 Sum_probs=62.4
Q ss_pred EEEEecCCeEEehhHHHHhccCHHHHHhhcCCC----CCCCcceEEecCCCHHHHHHHHHHhhCCCccCCChhhHHHHHH
Q 037646 65 VTIYTDYNGIIYAHANVLGMASPVMKGMLNQSK----GHGRWRSLSIHGVPQDAVRVFIRFLYSSCSEKADMEDYVLHLL 140 (377)
Q Consensus 65 V~~~v~~g~~~~aHr~ILaa~S~~F~~mf~~~~----~e~~~~~I~i~~v~~~af~~lL~flYtg~i~~~~~~~~v~~Ll 140 (377)
|++.| ||..|...+..|..... .||.... .....+.+-| |=++..|+.+|+|+-+|.+..+.. ..+..++
T Consensus 2 V~LNV-GG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~-~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNV-SGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRH-ECISAYD 75 (105)
T ss_dssp EEEEE-TTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTT-SCHHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCC-cCHHHHH
Confidence 67899 99999999999975432 2343310 0112345555 458999999999999999987652 2478899
Q ss_pred HHHhccCchhH--HHHHHHHH
Q 037646 141 VLSHVFVVPQL--KRECERQL 159 (377)
Q Consensus 141 ~lA~~y~v~~L--~~~c~~~L 159 (377)
.-|++|+|+.+ ..-|....
T Consensus 76 ~Ea~fy~i~~l~~~~cc~~~~ 96 (105)
T 1nn7_A 76 EELAFFGLIPEIIGDCCYEEY 96 (105)
T ss_dssp HHHHHHTCCSCCBCHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHH
Confidence 99999999876 33444433
No 41
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=86.98 E-value=0.48 Score=37.94 Aligned_cols=49 Identities=24% Similarity=0.589 Sum_probs=39.7
Q ss_pred HHHHHhhhccCCcCCCCCh--hHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHH
Q 037646 287 ELLVRHFAGCRLRIPGKCS--HCKRMWQLLELHSRLCDDSDVCRVPLCRNFKERI 339 (377)
Q Consensus 287 ~~l~~H~~~c~~r~~~~c~--~c~~~~~l~~~h~~~c~~~~~c~vp~c~~~k~~~ 339 (377)
-.++.|...|. +++|. .|..|-.|+. |...|.....|..|.|..+.+-+
T Consensus 17 l~~L~HA~~C~---~~~C~~p~C~~mK~ll~-H~~~C~~r~~~~c~~C~~~~~Ll 67 (121)
T 3t92_A 17 IQSLVHAAQCR---NANCSLPSCQKMKRVVQ-HTKGCKRKTNGGCPICKQLIALA 67 (121)
T ss_dssp HHHHHHHHHCC---CTTCCCHHHHHHHHHHH-HHHHCSSTTTTTCHHHHHHHHHH
T ss_pred HHHHHHHccCc---CCCCCCchhHHHHHHHH-HHHHccCCCCCCCCchHHHHHHH
Confidence 45678999995 45676 6999999998 99999875569999999888744
No 42
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.05 E-value=2.6 Score=32.39 Aligned_cols=65 Identities=14% Similarity=0.015 Sum_probs=45.0
Q ss_pred cCCChhhHHHHHHHHHhccCchhHHHHHHHHHhhcCC------------ChHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 037646 128 EKADMEDYVLHLLVLSHVFVVPQLKRECERQLEHGLL------------STENVVDIFQLALLCDAPRLSLVCHRMILKN 195 (377)
Q Consensus 128 ~~~~~~~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l------------~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~ 195 (377)
.++. +|...++.+|+.|+++.|...|.+|+.. +. +.+....++.- +-.+-..+.+.+++|+..+
T Consensus 7 ~L~~--~NCl~i~~~A~~~~~~~L~~~a~~fi~~-nF~~v~~~~eFl~L~~~~L~~lL~s-dv~~E~~vf~av~~Wv~~d 82 (105)
T 2eqx_A 7 GVQV--GNCLQVMWLADRHSDPELYTAAKHCAKT-HLAQLQNTEEFLHLPHRLLTDIISD-GVPCSQNPTEAIEAWINFN 82 (105)
T ss_dssp CCCT--TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TCHHHHTSHHHHHSCHHHHHHHHHT-CEETTSCHHHHHHHHHHTT
T ss_pred cCCH--HHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHHHHhcccHhhCCHHHHHHHHcC-CCCCHHHHHHHHHHHHHcC
Confidence 3455 8999999999999999999999999976 43 33334444432 2223345777777777654
Q ss_pred H
Q 037646 196 F 196 (377)
Q Consensus 196 f 196 (377)
.
T Consensus 83 ~ 83 (105)
T 2eqx_A 83 K 83 (105)
T ss_dssp H
T ss_pred H
Confidence 3
No 43
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=82.33 E-value=1.2 Score=33.94 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=30.3
Q ss_pred CCChHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 037646 163 LLSTENVVDIFQLALLCDAPRLSLVCHRMILKN 195 (377)
Q Consensus 163 ~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~ 195 (377)
.++.+|+.+++..|..|+.+.|.+.|.+|+.++
T Consensus 76 ~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 367899999999999999999999999999875
No 44
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=79.52 E-value=4.2 Score=31.86 Aligned_cols=74 Identities=22% Similarity=0.508 Sum_probs=49.5
Q ss_pred HHHHhhhccCCcCCCCCh--hHHHHHHHHHHHhhcCCCCCCCCCCCCHHHHH--------------------HHHHHcch
Q 037646 288 LLVRHFAGCRLRIPGKCS--HCKRMWQLLELHSRLCDDSDVCRVPLCRNFKE--------------------RIKKQSKK 345 (377)
Q Consensus 288 ~l~~H~~~c~~r~~~~c~--~c~~~~~l~~~h~~~c~~~~~c~vp~c~~~k~--------------------~~~~~~~~ 345 (377)
.++-|...|.. +.|. .|..|-.|+ -|...|.......-|.|..+-. .+++.-++
T Consensus 17 ~~L~HA~~C~~---~~C~~~~C~~mK~ll-~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~~~~C~VP~C~~iK~~~~q 92 (112)
T 3p57_P 17 QSLVHACQCRN---ANCSLPSCQKMKRVV-QHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENKCPVPFCLNIKQKLRQ 92 (112)
T ss_dssp HHHHHHHHCCC---TTCCCTTHHHHHHHH-TCTTCC-------CCCHHHHHHHHHHHHTTCCSTTCCSTTHHHHHHHHHH
T ss_pred HHHHHHccCCC---CCCCChhhHHHHHHH-HHHHHccCCCCCCCcccHHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHH
Confidence 67789999974 3555 798887775 5788888643355567776543 66776777
Q ss_pred hHHHHHHHHHHHHHHhhhcC
Q 037646 346 DEIKWKKLVEKMLRTKRIGG 365 (377)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~ 365 (377)
+..+.++-...+++.|..+|
T Consensus 93 ~q~q~r~~~~~~~rrr~a~~ 112 (112)
T 3p57_P 93 QQLQHRLQQAQMLRRRMASM 112 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 78888888888888887654
No 45
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=72.36 E-value=3.1 Score=32.76 Aligned_cols=33 Identities=15% Similarity=0.314 Sum_probs=29.9
Q ss_pred CCChHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 037646 163 LLSTENVVDIFQLALLCDAPRLSLVCHRMILKN 195 (377)
Q Consensus 163 ~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~ 195 (377)
.++.+|+.+++..|..++.+.|.+.|.+|+.++
T Consensus 94 ~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 94 NLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 367899999999999999999999999999754
No 46
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=69.56 E-value=1.7 Score=34.83 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=29.2
Q ss_pred CCChHHHHHHHHHHhcCCChHHHHHHHHHHHHhHHH
Q 037646 163 LLSTENVVDIFQLALLCDAPRLSLVCHRMILKNFKV 198 (377)
Q Consensus 163 ~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~f~~ 198 (377)
.++.+|+.+++..|..++.+.|.+.|.+|+.+++..
T Consensus 86 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 367899999999999999999999999999887653
No 47
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=67.97 E-value=4.5 Score=31.42 Aligned_cols=40 Identities=23% Similarity=0.311 Sum_probs=32.0
Q ss_pred HHHHHHhhc--CCChHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 037646 154 ECERQLEHG--LLSTENVVDIFQLALLCDAPRLSLVCHRMIL 193 (377)
Q Consensus 154 ~c~~~L~~~--~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~ 193 (377)
...+|+-.+ .++.+|+.+++..|..++.+.|.+.|.+|+.
T Consensus 76 ~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 76 QVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 334444332 3678999999999999999999999999974
No 48
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=66.80 E-value=2.6 Score=32.89 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=27.6
Q ss_pred CChHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 037646 164 LSTENVVDIFQLALLCDAPRLSLVCHRMILKN 195 (377)
Q Consensus 164 l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~ 195 (377)
++.+|+.+++..|..++.+.|.+.|.+|+.++
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 67899999999999999999999999998764
No 49
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=65.94 E-value=5.2 Score=39.92 Aligned_cols=86 Identities=5% Similarity=-0.113 Sum_probs=57.9
Q ss_pred cEEEEecCCeEEehhHHHHhccCHH-HHHhhcC-CCCCCCcceEEecCCCHHHHHHHHHHhhC-CCccCCChhhHHHHHH
Q 037646 64 DVTIYTDYNGIIYAHANVLGMASPV-MKGMLNQ-SKGHGRWRSLSIHGVPQDAVRVFIRFLYS-SCSEKADMEDYVLHLL 140 (377)
Q Consensus 64 DV~~~v~~g~~~~aHr~ILaa~S~~-F~~mf~~-~~~e~~~~~I~i~~v~~~af~~lL~flYt-g~i~~~~~~~~v~~Ll 140 (377)
=|++.| ||..|...+..|...-.- +..++.. .......+++-+ |=++..|+.+|+|+.+ |++..+.. -....++
T Consensus 53 ~v~lNV-gG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~-~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINI-SGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVN-VPLDIFS 129 (514)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTT-SCHHHHH
T ss_pred EEEEEe-CCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCc-ccHHHHH
Confidence 467788 999999999998643211 1111110 111123445655 5699999999999999 99877652 2456788
Q ss_pred HHHhccCchhHH
Q 037646 141 VLSHVFVVPQLK 152 (377)
Q Consensus 141 ~lA~~y~v~~L~ 152 (377)
.-|++|+++.+.
T Consensus 130 ~E~~f~~i~~~~ 141 (514)
T 2r9r_B 130 EEIRFYELGEEA 141 (514)
T ss_dssp HHHHHTTCCHHH
T ss_pred HHHHhcCCCHHH
Confidence 889999998754
No 50
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=65.53 E-value=5.2 Score=30.81 Aligned_cols=31 Identities=23% Similarity=0.169 Sum_probs=28.4
Q ss_pred CCChHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 037646 163 LLSTENVVDIFQLALLCDAPRLSLVCHRMIL 193 (377)
Q Consensus 163 ~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~ 193 (377)
.++.+|+.+++..|..++.+.|.+.|.+|+.
T Consensus 85 ~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 3678899999999999999999999999974
No 51
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=64.48 E-value=6.5 Score=30.39 Aligned_cols=30 Identities=40% Similarity=0.577 Sum_probs=27.6
Q ss_pred CCChHHHHHHHHHHhcCCChHHHHHHHHHH
Q 037646 163 LLSTENVVDIFQLALLCDAPRLSLVCHRMI 192 (377)
Q Consensus 163 ~l~~~n~~~il~~A~~~~~~~L~~~c~~~I 192 (377)
.++.+|+.+++..|..++.+.|.+.|.+|+
T Consensus 90 ~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 TVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 367899999999999999999999999986
No 52
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=63.42 E-value=6.2 Score=30.69 Aligned_cols=31 Identities=19% Similarity=0.301 Sum_probs=28.9
Q ss_pred CChHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 037646 164 LSTENVVDIFQLALLCDAPRLSLVCHRMILK 194 (377)
Q Consensus 164 l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~ 194 (377)
++.+|+.+++..|..++.+.|.+.|.+|+.+
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 6789999999999999999999999999875
No 53
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=63.18 E-value=1.8 Score=34.79 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=30.7
Q ss_pred CCChHHHHHHHHHHhcCCChHHHHHHHHHHHHhH
Q 037646 163 LLSTENVVDIFQLALLCDAPRLSLVCHRMILKNF 196 (377)
Q Consensus 163 ~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~f 196 (377)
.++.+|+.+++..|..++.+.|.+.|.+||..++
T Consensus 100 ~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp CCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 3678999999999999999999999999998654
No 54
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=53.18 E-value=12 Score=30.72 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=28.0
Q ss_pred hHHHHHHHHHhccCchhHHHHHHHHHhhcCC
Q 037646 134 DYVLHLLVLSHVFVVPQLKRECERQLEHGLL 164 (377)
Q Consensus 134 ~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l 164 (377)
+++..++.+|+.|+++.|+..|.+|+.. ++
T Consensus 135 ~n~~~~~~~A~~~~~~~L~~~~~~~i~~-~~ 164 (172)
T 3htm_A 135 ENAAEILILADLHSADQLKTQAVDFINY-HA 164 (172)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHH-HH
Confidence 7899999999999999999999999988 44
No 55
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=51.89 E-value=6.3 Score=31.88 Aligned_cols=29 Identities=24% Similarity=0.393 Sum_probs=27.0
Q ss_pred CChHHHHHHHHHHhcCCChHHHHHHHHHH
Q 037646 164 LSTENVVDIFQLALLCDAPRLSLVCHRMI 192 (377)
Q Consensus 164 l~~~n~~~il~~A~~~~~~~L~~~c~~~I 192 (377)
++.+|+.+++..|..|+.+.|.+.|.+||
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 67899999999999999999999999875
No 56
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=49.47 E-value=6.9 Score=31.17 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=26.3
Q ss_pred CChHHHHHHHHHHhcCCChHHHHHHHHHHHHhH
Q 037646 164 LSTENVVDIFQLALLCDAPRLSLVCHRMILKNF 196 (377)
Q Consensus 164 l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~f 196 (377)
++.+++..++..|..|+.+.|.+.|.+++.+++
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNL 123 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC-----
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 567899999999999999999999999998654
No 57
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=48.96 E-value=10 Score=29.51 Aligned_cols=31 Identities=16% Similarity=0.125 Sum_probs=27.3
Q ss_pred CChHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 037646 164 LSTENVVDIFQLALLCDAPRLSLVCHRMILK 194 (377)
Q Consensus 164 l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~ 194 (377)
++.+|+.+++..|..++.+.|.+.|.+++..
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 6789999999999999999999999998753
No 58
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=45.55 E-value=23 Score=24.93 Aligned_cols=14 Identities=29% Similarity=0.591 Sum_probs=8.4
Q ss_pred CCCCCCCCCCCccc
Q 037646 14 APAAPPLPGPATSY 27 (377)
Q Consensus 14 ~p~ppp~p~~~~~~ 27 (377)
+.+|||.|+|+.+|
T Consensus 3 m~pp~~a~~pa~~~ 16 (69)
T 2xk0_A 3 MAPPVAAPSPAVTY 16 (69)
T ss_dssp SSCSSSSSCCCCCC
T ss_pred CCCCCCCCCccccc
Confidence 45566677766554
No 59
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=42.22 E-value=4 Score=32.24 Aligned_cols=33 Identities=9% Similarity=-0.024 Sum_probs=23.4
Q ss_pred CCChHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 037646 163 LLSTENVVDIFQLALLCDAPRLSLVCHRMILKN 195 (377)
Q Consensus 163 ~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~ 195 (377)
.++.+|+..++..|..++.+.|.+.|.+|+.+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 378899999999999999999999999998754
No 60
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=37.58 E-value=26 Score=31.91 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=28.0
Q ss_pred hHHHHHHHHHhccCchhHHHHHHHHHhhcCC
Q 037646 134 DYVLHLLVLSHVFVVPQLKRECERQLEHGLL 164 (377)
Q Consensus 134 ~~v~~Ll~lA~~y~v~~L~~~c~~~L~~~~l 164 (377)
+++..++.+|+.|+++.|+..|.++|.. ++
T Consensus 275 ~n~~~~l~~A~~~~~~~L~~~~~~~i~~-~~ 304 (312)
T 3hqi_A 275 ENAAEILILADLHSADQLKTQAVDFINY-HA 304 (312)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH-HH
Confidence 7899999999999999999999999988 54
No 61
>3r8n_R 30S ribosomal protein S18; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_R 3fih_R* 3iy8_R 3j18_R* 2wwl_R 3oar_R 3oaq_R 3ofb_R 3ofa_R 3ofp_R 3ofx_R 3ofy_R 3ofo_R 3r8o_R 4a2i_R 4gd1_R 4gd2_R
Probab=37.05 E-value=28 Score=23.42 Aligned_cols=23 Identities=9% Similarity=0.112 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCC
Q 037646 347 EIKWKKLVEKMLRTKRIGGANFF 369 (377)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ 369 (377)
...++.+.+-+.+||.||+-|+.
T Consensus 30 ~k~QR~l~~AIKrAR~~~LlP~~ 52 (55)
T 3r8n_R 30 AKYQRQLARAIKRARYLSLLPYT 52 (55)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCSC
T ss_pred HHHHHHHHHHHHHHHHhccCCcc
Confidence 44568889999999999999985
No 62
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=33.14 E-value=26 Score=30.91 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=29.5
Q ss_pred CCChHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 037646 163 LLSTENVVDIFQLALLCDAPRLSLVCHRMILKN 195 (377)
Q Consensus 163 ~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~ 195 (377)
.++.+|+.+++..|..++.+.|.+.|.+|+.++
T Consensus 98 ~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~ 130 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGC 130 (256)
T ss_dssp CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred cccHhHHHHHHHHHHHHChHHHHHHHHHHHHhh
Confidence 367899999999999999999999999999865
No 63
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=31.55 E-value=27 Score=31.23 Aligned_cols=42 Identities=24% Similarity=0.257 Sum_probs=33.4
Q ss_pred HHHHHHhhc--CCChHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 037646 154 ECERQLEHG--LLSTENVVDIFQLALLCDAPRLSLVCHRMILKN 195 (377)
Q Consensus 154 ~c~~~L~~~--~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~ 195 (377)
...+|+-.+ .++.+|+.+++..|..++.+.|.+.|.+|+.++
T Consensus 95 ~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~ 138 (279)
T 3i3n_A 95 AVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKK 138 (279)
T ss_dssp HHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHc
Confidence 334444332 356789999999999999999999999999864
No 64
>2v8f_C MDIA1, profilin IIA; alternative splicing, protein-binding, cytoplasm, acetylation, cytoskeleton, actin-binding; 1.1A {Mus musculus}
Probab=30.11 E-value=20 Score=19.85 Aligned_cols=8 Identities=75% Similarity=1.730 Sum_probs=3.9
Q ss_pred CCCCCCCC
Q 037646 15 PAAPPLPG 22 (377)
Q Consensus 15 p~ppp~p~ 22 (377)
|+|||+|+
T Consensus 2 PPPPplPg 9 (26)
T 2v8f_C 2 PPPPPLPG 9 (26)
T ss_pred cCCCCCCC
Confidence 44455554
No 65
>4g9q_A 4-carboxymuconolactone decarboxylase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.77A {Sinorhizobium meliloti}
Probab=25.43 E-value=3.1e+02 Score=24.51 Aligned_cols=97 Identities=12% Similarity=0.184 Sum_probs=52.6
Q ss_pred HHHHHhhcCCCCCCCcceEE--------ecCCCHHHHHHHHHHhhCCCccCCCh---hhHHHHHHHHHhccCchhHHHHH
Q 037646 87 PVMKGMLNQSKGHGRWRSLS--------IHGVPQDAVRVFIRFLYSSCSEKADM---EDYVLHLLVLSHVFVVPQLKREC 155 (377)
Q Consensus 87 ~~F~~mf~~~~~e~~~~~I~--------i~~v~~~af~~lL~flYtg~i~~~~~---~~~v~~Ll~lA~~y~v~~L~~~c 155 (377)
-||..|+...-.-.+..... +.++.|+--+...+|+|.+-+.-+.. ...+..|-.++-.-..+.|+...
T Consensus 18 ~~~~~~~~~~~~~aq~~~~~~~~~~pd~l~~~aP~l~~~~~e~~fG~vw~r~~Ld~k~R~Litla~l~A~g~~~~l~~H~ 97 (269)
T 4g9q_A 18 LYFQSMMTTSNAGAQQPNVEGRRFSPDQVRSVAPALEQYTQQRLYGDVWQRPGLNRRDRSLVTIAALIARGEAPALTYYA 97 (269)
T ss_dssp --------------CCSCGGGSSSCHHHHHTTCHHHHHHHHHTTTTTGGGCTTSCHHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcccccCCHHHHHhhCcHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 48888886532222222222 23566666677889999876654432 24444444444444567888888
Q ss_pred HHHHhhcCCChHHHHHHH-HHHhcCCChHH
Q 037646 156 ERQLEHGLLSTENVVDIF-QLALLCDAPRL 184 (377)
Q Consensus 156 ~~~L~~~~l~~~n~~~il-~~A~~~~~~~L 184 (377)
...+.. -++++.+.+++ +.+...+.+..
T Consensus 98 ~~Al~~-G~T~~EI~Evl~q~~~Y~G~P~a 126 (269)
T 4g9q_A 98 DQALEN-GVKPSEISETITHLAYYSGWGKA 126 (269)
T ss_dssp HHHHHT-TCCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHhccHHHH
Confidence 888999 59999998875 45555565553
No 66
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=25.42 E-value=87 Score=16.91 Aligned_cols=21 Identities=19% Similarity=0.232 Sum_probs=16.9
Q ss_pred HHHHHHhcCCChHHHHHHHHH
Q 037646 171 DIFQLALLCDAPRLSLVCHRM 191 (377)
Q Consensus 171 ~il~~A~~~~~~~L~~~c~~~ 191 (377)
.++-+|..+..++|...|++-
T Consensus 3 kvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhc
Confidence 456788899999999888764
No 67
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=22.93 E-value=38 Score=23.55 Aligned_cols=15 Identities=33% Similarity=0.545 Sum_probs=12.6
Q ss_pred CCChhHHHHHHHHHH
Q 037646 302 GKCSHCKRMWQLLEL 316 (377)
Q Consensus 302 ~~c~~c~~~~~l~~~ 316 (377)
.+|+.|+++..+|.-
T Consensus 9 ~~C~~C~~~~~~l~~ 23 (85)
T 1ego_A 9 SGCPYCVRAKDLAEK 23 (85)
T ss_dssp TTSTHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
Confidence 479999999988764
No 68
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=22.86 E-value=80 Score=25.69 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=31.4
Q ss_pred CCChHHHHHHHHHHhcCCChHHHHHHHHHHHHhHH
Q 037646 163 LLSTENVVDIFQLALLCDAPRLSLVCHRMILKNFK 197 (377)
Q Consensus 163 ~l~~~n~~~il~~A~~~~~~~L~~~c~~~I~~~f~ 197 (377)
.++.+++.+++..|...+...|.+.|-+++...+.
T Consensus 93 ~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 93 KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999986553
No 69
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=22.83 E-value=38 Score=24.12 Aligned_cols=15 Identities=33% Similarity=0.753 Sum_probs=13.6
Q ss_pred CChhHHHHHHHHHHH
Q 037646 303 KCSHCKRMWQLLELH 317 (377)
Q Consensus 303 ~c~~c~~~~~l~~~h 317 (377)
+|+.|++..++|.-+
T Consensus 13 ~Cp~C~~ak~~L~~~ 27 (87)
T 1aba_A 13 KCGPCDNAKRLLTVK 27 (87)
T ss_dssp CCHHHHHHHHHHHHT
T ss_pred cCccHHHHHHHHHHc
Confidence 799999999998765
No 70
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=22.62 E-value=4.2 Score=31.88 Aligned_cols=30 Identities=20% Similarity=0.348 Sum_probs=26.4
Q ss_pred CChHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 037646 164 LSTENVVDIFQLALLCDAPRLSLVCHRMIL 193 (377)
Q Consensus 164 l~~~n~~~il~~A~~~~~~~L~~~c~~~I~ 193 (377)
++.+|+.+++..|..++.+.|.+.|.+|+.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 567899999999999999999999988763
No 71
>3i1m_R 30S ribosomal protein S18; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_R* 1vs5_R 3i1o_R 3i1q_R 3i1s_R 3i1z_R 3i21_R 3izv_V* 3izw_V* 3kc4_R 3or9_R 3ora_R 3sfs_R* 3uoq_R* 4gaq_R* 4gas_R* 2qal_R* 1p6g_R 1p87_R 2aw7_R ...
Probab=21.60 E-value=66 Score=23.05 Aligned_cols=24 Identities=8% Similarity=0.115 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCC
Q 037646 347 EIKWKKLVEKMLRTKRIGGANFFS 370 (377)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~ 370 (377)
...++.|.+-|.+||.||+-|+..
T Consensus 49 ~k~QR~l~~AIKrAR~~gLlP~~~ 72 (75)
T 3i1m_R 49 AKYQRQLARAIKRARYLSLLPYTD 72 (75)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCSSS
T ss_pred HHHHHHHHHHHHHHHHhccCCcCC
Confidence 445688889999999999999854
No 72
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=21.54 E-value=41 Score=23.53 Aligned_cols=17 Identities=24% Similarity=0.392 Sum_probs=13.9
Q ss_pred CCChhHHHHHHHHHHHh
Q 037646 302 GKCSHCKRMWQLLELHS 318 (377)
Q Consensus 302 ~~c~~c~~~~~l~~~h~ 318 (377)
.+|+.|++...+|.-+.
T Consensus 12 ~~Cp~C~~~~~~L~~~~ 28 (89)
T 3msz_A 12 NGCPYCVWAKQWFEENN 28 (89)
T ss_dssp TTCHHHHHHHHHHHHTT
T ss_pred CCChhHHHHHHHHHHcC
Confidence 38999999999987553
Done!