Query 037651
Match_columns 750
No_of_seqs 660 out of 4221
Neff 10.1
Searched_HMMs 13730
Date Mon Mar 25 04:27:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037651.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037651hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 6E-31 4.4E-35 270.9 18.4 254 352-652 51-310 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 9.9E-30 7.2E-34 261.6 19.5 251 376-671 50-304 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 100.0 8.3E-26 6E-30 239.6 35.0 188 399-645 196-383 (384)
4 d2omza2 c.10.2.1 (A:33-416) In 99.9 1.2E-25 8.5E-30 238.4 34.0 165 351-531 219-383 (384)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.9 1.1E-24 7.7E-29 222.9 29.9 273 331-654 11-292 (305)
6 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 2.9E-24 2.1E-28 216.9 19.4 206 377-625 33-239 (284)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 3.9E-24 2.8E-28 216.0 19.7 207 401-650 33-240 (284)
8 d1xkua_ c.10.2.7 (A:) Decorin 99.9 1.2E-22 8.6E-27 207.5 29.1 83 135-220 11-93 (305)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 2.4E-22 1.7E-26 200.3 20.9 201 400-650 10-210 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.9 3.9E-22 2.8E-26 198.8 21.5 202 4-220 8-209 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 2.6E-17 1.9E-21 171.1 36.0 149 350-528 203-351 (353)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 4.4E-17 3.2E-21 169.3 33.7 178 7-219 39-217 (353)
13 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 1E-20 7.6E-25 204.8 -0.8 39 399-437 254-296 (460)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 3.7E-18 2.7E-22 165.3 16.7 188 397-643 38-225 (227)
15 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 9E-21 6.6E-25 205.3 -3.7 110 7-117 3-125 (460)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 3.5E-17 2.5E-21 158.3 20.5 203 11-240 24-226 (227)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 1.1E-17 8.3E-22 163.7 14.9 221 8-240 10-234 (242)
18 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 2.3E-17 1.7E-21 161.5 15.5 105 353-461 10-116 (242)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 5.2E-17 3.8E-21 154.7 16.6 165 423-644 45-209 (210)
20 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 1.8E-17 1.3E-21 155.6 10.9 173 353-534 10-183 (192)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.6E-16 1.1E-20 151.3 17.6 180 12-215 30-209 (210)
22 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.9E-16 1.4E-20 149.3 17.3 147 30-195 39-185 (199)
23 d2omxa2 c.10.2.1 (A:37-235) In 99.7 4.9E-16 3.6E-20 146.5 18.2 162 4-187 38-199 (199)
24 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 4.9E-17 3.6E-21 152.5 10.3 172 334-510 12-183 (192)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.6 2E-15 1.5E-19 150.7 11.4 80 136-216 25-105 (284)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.6 4.1E-15 3E-19 148.4 11.7 43 277-323 220-262 (284)
27 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 5.8E-15 4.2E-19 152.3 5.6 236 375-649 30-316 (344)
28 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 4.5E-14 3.3E-18 127.2 9.7 129 27-166 14-147 (162)
29 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 7E-14 5.1E-18 125.9 10.0 124 399-527 17-145 (162)
30 d1dcea3 c.10.2.2 (A:444-567) R 99.5 2.8E-13 2E-17 115.8 13.1 103 9-117 1-103 (124)
31 d1dcea3 c.10.2.2 (A:444-567) R 99.4 5.5E-13 4E-17 113.9 13.4 118 380-502 2-122 (124)
32 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 2.8E-14 2.1E-18 147.0 5.5 244 28-272 28-316 (344)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 6.3E-14 4.6E-18 131.0 -0.8 130 464-641 40-180 (198)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 4.1E-13 3E-17 125.4 -0.9 82 135-219 71-153 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 5.4E-11 3.9E-15 105.9 12.4 109 5-117 7-116 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 6.8E-11 4.9E-15 105.2 11.3 84 33-118 10-94 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 98.4 1.9E-08 1.4E-12 89.8 -0.5 59 583-641 87-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.3 1.8E-08 1.3E-12 89.9 -1.1 80 447-527 64-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.6 2.6E-05 1.9E-09 69.1 6.0 18 100-117 40-57 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.6 1E-05 7.6E-10 71.7 3.3 37 448-484 72-112 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.9 0.00024 1.7E-08 62.6 3.5 19 100-118 42-60 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.9 0.00027 2E-08 62.2 3.8 17 153-169 127-143 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97 E-value=6e-31 Score=270.85 Aligned_cols=254 Identities=31% Similarity=0.508 Sum_probs=217.0
Q ss_pred CCcEEEeecccccC--CCCcchhccCCCCCEEecCC-CcCcccCCcCCcCCCCCCeEECccCccccccCccccCCCCCCE
Q 037651 352 NLTKLYLRDNLFSG--PIPNDLGQKTPFLTDLDISF-NSLNGSIPQSVGNLKQLLTLVISNNNLSGGIPQFLKNISSLYI 428 (750)
Q Consensus 352 ~L~~L~l~~n~l~~--~i~~~~~~~~~~L~~L~ls~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 428 (750)
.++.|++++|.++| .+|..+.. +++|++|++++ |.++|.+|..++++++|++|++++|++.+..+..+..+..|+.
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~-L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLAN-LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGG-CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEECCCCCCCCCCCCChHHhc-Cccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 68888999988887 47777765 89999999986 7888888988999999999999999999888888888999999
Q ss_pred EeCCCCccceeCCccccCCCCCCEEEccCCcCcCCCCccccCCCCC-CEEecCCCcccccCChhhhhcCCCCCEEEccCc
Q 037651 429 LDMTKNNFSGEIPESIGSLLTIRFLVLSNNHLSGEIPPSLKNCSLM-DSLDLGENQLSGNIPAWIGESMPSLSILRLRSN 507 (750)
Q Consensus 429 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~L~~n~~~~~~p~~~~~~l~~L~~L~Ls~n 507 (750)
+++++|.+.+.+|..+..++.++.+++++|.+++.+|..+..+..+ +.+++++|++++..|..+.. + ....++++++
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~-l-~~~~l~l~~~ 207 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN-L-NLAFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGG-C-CCSEEECCSS
T ss_pred cccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccc-c-cccccccccc
Confidence 9999999888888889999999999999999988888888888776 88999999998888877653 4 4557899999
Q ss_pred cceeecCccccCCCCCcEEEcccCcCCCcCCccccccccCccCCCCCccccCceEEEEecceEeecccccccchhhhccc
Q 037651 508 HFNGTIPSELCKLSALHILDLSHNNLSGPIPHCVGDFSAMKVKPPDTEIYQGSLQVAIKGTQYVYQQTLYLMPVELTSLL 587 (750)
Q Consensus 508 ~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~l~ 587 (750)
...+.+|..+..+++|+.+++++|.+++.+| .++.++
T Consensus 208 ~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-------------------------------------------~~~~~~ 244 (313)
T d1ogqa_ 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-------------------------------------------KVGLSK 244 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGG-------------------------------------------GCCCCT
T ss_pred ccccccccccccccccccccccccccccccc-------------------------------------------cccccc
Confidence 9998888888899999999999998886544 355677
Q ss_pred cCCeEeccCCcCCCCcccccCCCccCcEEEccCCccCcCCCccccCCCCCCeEECcCCc-ceec-CC
Q 037651 588 HLGTLNLSGNQLVGKIPTQIGKLEWLESLDLSRNKLSGSIPPSMVSIRFLSFLNLSFNN-LSGE-IP 652 (750)
Q Consensus 588 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~-l~g~-ip 652 (750)
+|+.|+|++|+++|.+|+.|+++++|+.|||++|+++|.+|+ +.++++|+.+++++|+ ++|. +|
T Consensus 245 ~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~plp 310 (313)
T d1ogqa_ 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp TCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEESTTSS
T ss_pred ccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCccccCCCCC
Confidence 889999999999999999999999999999999999998985 5788899999999997 6664 45
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.96 E-value=9.9e-30 Score=261.64 Aligned_cols=251 Identities=31% Similarity=0.489 Sum_probs=222.1
Q ss_pred CCCCEEecCCCcCcc--cCCcCCcCCCCCCeEECcc-CccccccCccccCCCCCCEEeCCCCccceeCCccccCCCCCCE
Q 037651 376 PFLTDLDISFNSLNG--SIPQSVGNLKQLLTLVISN-NNLSGGIPQFLKNISSLYILDMTKNNFSGEIPESIGSLLTIRF 452 (750)
Q Consensus 376 ~~L~~L~ls~n~l~~--~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 452 (750)
.+++.|++++|.+.+ .+|..++++++|++|++++ |.+.|.+|..+.++++|++|++++|++.+..+..+..+..|+.
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 368899999999887 4788999999999999986 7899899999999999999999999999888888899999999
Q ss_pred EEccCCcCcCCCCccccCCCCCCEEecCCCcccccCChhhhhcCCC-CCEEEccCccceeecCccccCCCCCcEEEcccC
Q 037651 453 LVLSNNHLSGEIPPSLKNCSLMDSLDLGENQLSGNIPAWIGESMPS-LSILRLRSNHFNGTIPSELCKLSALHILDLSHN 531 (750)
Q Consensus 453 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~l~~-L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n 531 (750)
+++++|.+.+.+|..+.+++.|+.+++++|.+.+.+|..+.. +.. ++.+++++|++++..|..+..+..+ .++++++
T Consensus 130 l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~-l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~ 207 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS-FSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGC-CCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSS
T ss_pred cccccccccccCchhhccCcccceeecccccccccccccccc-ccccccccccccccccccccccccccccc-ccccccc
Confidence 999999999899999999999999999999999999988876 555 4889999999999999888877655 6999999
Q ss_pred cCCCcCCccccccccCccCCCCCccccCceEEEEecceEeecccccccchhhhccccCCeEeccCCcCCCCcccccCCCc
Q 037651 532 NLSGPIPHCVGDFSAMKVKPPDTEIYQGSLQVAIKGTQYVYQQTLYLMPVELTSLLHLGTLNLSGNQLVGKIPTQIGKLE 611 (750)
Q Consensus 532 ~l~~~~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 611 (750)
...|.+|. .+..+++++.+++++|.+++.+| .++.++
T Consensus 208 ~~~~~~~~------------------------------------------~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~ 244 (313)
T d1ogqa_ 208 MLEGDASV------------------------------------------LFGSDKNTQKIHLAKNSLAFDLG-KVGLSK 244 (313)
T ss_dssp EEEECCGG------------------------------------------GCCTTSCCSEEECCSSEECCBGG-GCCCCT
T ss_pred cccccccc------------------------------------------ccccccccccccccccccccccc-cccccc
Confidence 88876654 45567788999999999997766 589999
Q ss_pred cCcEEEccCCccCcCCCccccCCCCCCeEECcCCcceecCCCCCCCCCcccccccCCCCC
Q 037651 612 WLESLDLSRNKLSGSIPPSMVSIRFLSFLNLSFNNLSGEIPTANQFQTSLIRQFMRIPGA 671 (750)
Q Consensus 612 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~~ 671 (750)
+|+.|||++|+++|.+|+.+.++++|++||+++|+|+|.||..+.+..+....+.||+..
T Consensus 245 ~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l 304 (313)
T d1ogqa_ 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCL 304 (313)
T ss_dssp TCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEE
T ss_pred ccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccc
Confidence 999999999999999999999999999999999999999998877777777778888643
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95 E-value=8.3e-26 Score=239.59 Aligned_cols=188 Identities=28% Similarity=0.417 Sum_probs=93.4
Q ss_pred CCCCCeEECccCccccccCccccCCCCCCEEeCCCCccceeCCccccCCCCCCEEEccCCcCcCCCCccccCCCCCCEEe
Q 037651 399 LKQLLTLVISNNNLSGGIPQFLKNISSLYILDMTKNNFSGEIPESIGSLLTIRFLVLSNNHLSGEIPPSLKNCSLMDSLD 478 (750)
Q Consensus 399 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 478 (750)
+++++.+++++|.+++..| +..+++|++|++++|+++. + ..+..+++|+.+++++|.+++..+ +..+++|++|+
T Consensus 196 l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~ 269 (384)
T d2omza2 196 LTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 269 (384)
T ss_dssp CTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred ccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCEee
Confidence 3344444444444443222 2333444444444444432 1 133444455555555555443221 44455555555
Q ss_pred cCCCcccccCChhhhhcCCCCCEEEccCccceeecCccccCCCCCcEEEcccCcCCCcCCccccccccCccCCCCCcccc
Q 037651 479 LGENQLSGNIPAWIGESMPSLSILRLRSNHFNGTIPSELCKLSALHILDLSHNNLSGPIPHCVGDFSAMKVKPPDTEIYQ 558 (750)
Q Consensus 479 L~~n~~~~~~p~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~ 558 (750)
+++|++. .++.. . .++.++.++++.|.+.+. ..+..+++++.|++++|++++..
T Consensus 270 l~~~~l~-~~~~~-~-~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--------------------- 323 (384)
T d2omza2 270 LGANQIS-NISPL-A-GLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--------------------- 323 (384)
T ss_dssp CCSSCCC-CCGGG-T-TCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG---------------------
T ss_pred ccCcccC-CCCcc-c-cccccccccccccccccc--cccchhcccCeEECCCCCCCCCc---------------------
Confidence 5555554 22221 1 255555555555555431 23455566666666666555321
Q ss_pred CceEEEEecceEeecccccccchhhhccccCCeEeccCCcCCCCcccccCCCccCcEEEccCCccCcCCCccccCCCCCC
Q 037651 559 GSLQVAIKGTQYVYQQTLYLMPVELTSLLHLGTLNLSGNQLVGKIPTQIGKLEWLESLDLSRNKLSGSIPPSMVSIRFLS 638 (750)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 638 (750)
.+..+++|++|++++|++++ +| .++++++|+.|++++|++++..| +.++++|+
T Consensus 324 -----------------------~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~ 376 (384)
T d2omza2 324 -----------------------PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRIT 376 (384)
T ss_dssp -----------------------GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCS
T ss_pred -----------------------ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCC
Confidence 13445556666666666653 33 36666666666666666665433 56666666
Q ss_pred eEECcCC
Q 037651 639 FLNLSFN 645 (750)
Q Consensus 639 ~l~ls~N 645 (750)
+|++++|
T Consensus 377 ~L~L~~N 383 (384)
T d2omza2 377 QLGLNDQ 383 (384)
T ss_dssp EEECCCE
T ss_pred EeeCCCC
Confidence 6666665
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95 E-value=1.2e-25 Score=238.45 Aligned_cols=165 Identities=24% Similarity=0.374 Sum_probs=119.1
Q ss_pred CCCcEEEeecccccCCCCcchhccCCCCCEEecCCCcCcccCCcCCcCCCCCCeEECccCccccccCccccCCCCCCEEe
Q 037651 351 SNLTKLYLRDNLFSGPIPNDLGQKTPFLTDLDISFNSLNGSIPQSVGNLKQLLTLVISNNNLSGGIPQFLKNISSLYILD 430 (750)
Q Consensus 351 ~~L~~L~l~~n~l~~~i~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 430 (750)
++|++|++++|.++ .++ .+ ..+++|+.|++++|.+++..+ +..+++|++|++++|.+.+.. .+..++.++.++
T Consensus 219 ~~L~~L~l~~n~l~-~~~-~l-~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~ 291 (384)
T d2omza2 219 TNLDELSLNGNQLK-DIG-TL-ASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS--PLAGLTALTNLE 291 (384)
T ss_dssp TTCCEEECCSSCCC-CCG-GG-GGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEE
T ss_pred CCCCEEECCCCCCC-Ccc-hh-hcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCC--cccccccccccc
Confidence 45555555555554 222 22 236777777777777765443 566778888888888877543 367788888888
Q ss_pred CCCCccceeCCccccCCCCCCEEEccCCcCcCCCCccccCCCCCCEEecCCCcccccCChhhhhcCCCCCEEEccCccce
Q 037651 431 MTKNNFSGEIPESIGSLLTIRFLVLSNNHLSGEIPPSLKNCSLMDSLDLGENQLSGNIPAWIGESMPSLSILRLRSNHFN 510 (750)
Q Consensus 431 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~l~~L~~L~Ls~n~l~ 510 (750)
+++|.+.+ ...+..+++++.|++++|++++.. .+..+++|++|++++|+++ .++ .+. .+++|++|++++|+++
T Consensus 292 ~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~-~l~-~l~-~l~~L~~L~l~~N~l~ 364 (384)
T d2omza2 292 LNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVS-DVS-SLA-NLTNINWLSAGHNQIS 364 (384)
T ss_dssp CCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCC-CCG-GGG-GCTTCCEEECCSSCCC
T ss_pred cccccccc--ccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCC-CCh-hHc-CCCCCCEEECCCCcCC
Confidence 88888874 234677888888888888888543 3778888888888888887 455 344 4888999999988888
Q ss_pred eecCccccCCCCCcEEEcccC
Q 037651 511 GTIPSELCKLSALHILDLSHN 531 (750)
Q Consensus 511 ~~~p~~l~~l~~L~~L~Ls~n 531 (750)
+..| +.++++|+.|+|++|
T Consensus 365 ~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 365 DLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp BCGG--GTTCTTCSEEECCCE
T ss_pred CChh--hccCCCCCEeeCCCC
Confidence 6554 788889999999887
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.94 E-value=1.1e-24 Score=222.88 Aligned_cols=273 Identities=22% Similarity=0.232 Sum_probs=225.1
Q ss_pred CCceEECCCCCCCCCCCCCCCCCcEEEeecccccCCCCcchhccCCCCCEEecCCCcCcccCCcCCcCCCCCCeEECccC
Q 037651 331 FPGSVDLSSNRFEGPLPLWSSNLTKLYLRDNLFSGPIPNDLGQKTPFLTDLDISFNSLNGSIPQSVGNLKQLLTLVISNN 410 (750)
Q Consensus 331 ~l~~l~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~i~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n 410 (750)
..+.+|.+++.++..++..++++++|++++|+++ .+|...+..+++|++|++++|.+....|..|.++++|++|++++|
T Consensus 11 ~~~~~~C~~~~L~~lP~~l~~~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n 89 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKN 89 (305)
T ss_dssp ETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSS
T ss_pred cCCEEEecCCCCCccCCCCCCCCCEEECcCCcCC-CcChhHhhccccccccccccccccccchhhhhCCCccCEecccCC
Confidence 3445666666665443334578999999999998 777766667999999999999999888999999999999999999
Q ss_pred ccccccCccccCCCCCCEEeCCCCccceeCCccccCCCCCCEEEccCCcCc--CCCCccccCCCCCCEEecCCCcccccC
Q 037651 411 NLSGGIPQFLKNISSLYILDMTKNNFSGEIPESIGSLLTIRFLVLSNNHLS--GEIPPSLKNCSLMDSLDLGENQLSGNI 488 (750)
Q Consensus 411 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~n~~~~~~ 488 (750)
+++. +|.. ....+..|++++|.+.+..+..+.....+..++...|... ...+..+..+++|+.+++++|.+. .+
T Consensus 90 ~l~~-l~~~--~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l 165 (305)
T d1xkua_ 90 QLKE-LPEK--MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TI 165 (305)
T ss_dssp CCSB-CCSS--CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SC
T ss_pred ccCc-Cccc--hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-cc
Confidence 9984 4443 3457899999999999776677778888999999888653 345667889999999999999998 67
Q ss_pred ChhhhhcCCCCCEEEccCccceeecCccccCCCCCcEEEcccCcCCCcCCccccccccCccCCCCCccccCceEEEEecc
Q 037651 489 PAWIGESMPSLSILRLRSNHFNGTIPSELCKLSALHILDLSHNNLSGPIPHCVGDFSAMKVKPPDTEIYQGSLQVAIKGT 568 (750)
Q Consensus 489 p~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 568 (750)
|..+ +++|+.|++++|...+..+..+..++.+++|++++|.+++..|.
T Consensus 166 ~~~~---~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~----------------------------- 213 (305)
T d1xkua_ 166 PQGL---PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNG----------------------------- 213 (305)
T ss_dssp CSSC---CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTT-----------------------------
T ss_pred Cccc---CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccc-----------------------------
Confidence 7654 68999999999999999999999999999999999999864443
Q ss_pred eEeecccccccchhhhccccCCeEeccCCcCCCCcccccCCCccCcEEEccCCccCcCCCcc------ccCCCCCCeEEC
Q 037651 569 QYVYQQTLYLMPVELTSLLHLGTLNLSGNQLVGKIPTQIGKLEWLESLDLSRNKLSGSIPPS------MVSIRFLSFLNL 642 (750)
Q Consensus 569 ~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~------l~~l~~L~~l~l 642 (750)
.+.++++|++|+|++|+++ .+|++|..+++|+.|+|++|+|+..-+.. ...+.+|+.+++
T Consensus 214 -------------~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L 279 (305)
T d1xkua_ 214 -------------SLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSL 279 (305)
T ss_dssp -------------TGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEEC
T ss_pred -------------cccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEEC
Confidence 4667888999999999998 67889999999999999999998543333 345688999999
Q ss_pred cCCcce-ecCCCC
Q 037651 643 SFNNLS-GEIPTA 654 (750)
Q Consensus 643 s~N~l~-g~ip~~ 654 (750)
++|++. +.+|.+
T Consensus 280 ~~N~~~~~~~~~~ 292 (305)
T d1xkua_ 280 FSNPVQYWEIQPS 292 (305)
T ss_dssp CSSSSCGGGSCGG
T ss_pred CCCcCccCcCCHh
Confidence 999985 455543
No 6
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=2.9e-24 Score=216.87 Aligned_cols=206 Identities=21% Similarity=0.187 Sum_probs=109.4
Q ss_pred CCCEEecCCCcCcccCCcCCcCCCCCCeEECccCccccccCccccCCCCCCEEeCC-CCccceeCCccccCCCCCCEEEc
Q 037651 377 FLTDLDISFNSLNGSIPQSVGNLKQLLTLVISNNNLSGGIPQFLKNISSLYILDMT-KNNFSGEIPESIGSLLTIRFLVL 455 (750)
Q Consensus 377 ~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls-~n~l~~~~~~~~~~l~~L~~L~L 455 (750)
++++|+|++|++++..+.+|.++++|++|++++|.+....+..+..+..++.++.. .+.+....+..|.++++|++|++
T Consensus 33 ~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l 112 (284)
T d1ozna_ 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (284)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEec
Confidence 34555555555554444455555555555555555555444555555555555443 33344344445555555555555
Q ss_pred cCCcCcCCCCccccCCCCCCEEecCCCcccccCChhhhhcCCCCCEEEccCccceeecCccccCCCCCcEEEcccCcCCC
Q 037651 456 SNNHLSGEIPPSLKNCSLMDSLDLGENQLSGNIPAWIGESMPSLSILRLRSNHFNGTIPSELCKLSALHILDLSHNNLSG 535 (750)
Q Consensus 456 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~ 535 (750)
++|.+....+..+...++|+.+++++|+++ .+|...+..+++|+.|++++|++.+..+..+..+++|+.+++++|++++
T Consensus 113 ~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~-~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCcccccccccccchhcccchhhhcccccc-ccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccc
Confidence 555555444445555555555555555555 3444333335555555555555555555555555556666666555554
Q ss_pred cCCccccccccCccCCCCCccccCceEEEEecceEeecccccccchhhhccccCCeEeccCCcCCCCcccccCCCccCcE
Q 037651 536 PIPHCVGDFSAMKVKPPDTEIYQGSLQVAIKGTQYVYQQTLYLMPVELTSLLHLGTLNLSGNQLVGKIPTQIGKLEWLES 615 (750)
Q Consensus 536 ~~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 615 (750)
..|. .|.++++|++||+++|++++..|..|+.+++|+.
T Consensus 192 i~~~------------------------------------------~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~ 229 (284)
T d1ozna_ 192 VHPH------------------------------------------AFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (284)
T ss_dssp ECTT------------------------------------------TTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred cChh------------------------------------------HhhhhhhcccccccccccccccccccccccccCE
Confidence 3332 2344445555666666655555555555666666
Q ss_pred EEccCCccCc
Q 037651 616 LDLSRNKLSG 625 (750)
Q Consensus 616 L~Ls~N~l~~ 625 (750)
|++++|++.+
T Consensus 230 L~l~~N~l~C 239 (284)
T d1ozna_ 230 LRLNDNPWVC 239 (284)
T ss_dssp EECCSSCEEC
T ss_pred EEecCCCCCC
Confidence 6666665554
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=3.9e-24 Score=215.95 Aligned_cols=207 Identities=21% Similarity=0.220 Sum_probs=97.8
Q ss_pred CCCeEECccCccccccCccccCCCCCCEEeCCCCccceeCCccccCCCCCCEEEcc-CCcCcCCCCccccCCCCCCEEec
Q 037651 401 QLLTLVISNNNLSGGIPQFLKNISSLYILDMTKNNFSGEIPESIGSLLTIRFLVLS-NNHLSGEIPPSLKNCSLMDSLDL 479 (750)
Q Consensus 401 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~-~n~l~~~~~~~~~~l~~L~~L~L 479 (750)
++++|+|++|++++..+..|.++++|++|++++|++....+..+..+..++.+... .+.++...+..|.++++|++|++
T Consensus 33 ~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l 112 (284)
T d1ozna_ 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (284)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEec
Confidence 44555555555544434445555555555555555554444444444444444433 23333333444555555555555
Q ss_pred CCCcccccCChhhhhcCCCCCEEEccCccceeecCccccCCCCCcEEEcccCcCCCcCCccccccccCccCCCCCccccC
Q 037651 480 GENQLSGNIPAWIGESMPSLSILRLRSNHFNGTIPSELCKLSALHILDLSHNNLSGPIPHCVGDFSAMKVKPPDTEIYQG 559 (750)
Q Consensus 480 ~~n~~~~~~p~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~~ 559 (750)
++|.+. .++...+..+++|+.+++++|++++..+..+..+++|+.|++++|++++..|.
T Consensus 113 ~~n~~~-~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~-------------------- 171 (284)
T d1ozna_ 113 DRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER-------------------- 171 (284)
T ss_dssp TTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT--------------------
T ss_pred CCcccc-cccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchh--------------------
Confidence 555544 22222222244555555555555433344444455555555555554422121
Q ss_pred ceEEEEecceEeecccccccchhhhccccCCeEeccCCcCCCCcccccCCCccCcEEEccCCccCcCCCccccCCCCCCe
Q 037651 560 SLQVAIKGTQYVYQQTLYLMPVELTSLLHLGTLNLSGNQLVGKIPTQIGKLEWLESLDLSRNKLSGSIPPSMVSIRFLSF 639 (750)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 639 (750)
.|.++++|+.+++++|++++..|..|..+++|+.||+++|++.+..|..+..+++|++
T Consensus 172 ----------------------~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~ 229 (284)
T d1ozna_ 172 ----------------------AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (284)
T ss_dssp ----------------------TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred ----------------------hhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCE
Confidence 2334444455555555555444555555555555555555555444444555555555
Q ss_pred EECcCCcceec
Q 037651 640 LNLSFNNLSGE 650 (750)
Q Consensus 640 l~ls~N~l~g~ 650 (750)
+++++|++.|.
T Consensus 230 L~l~~N~l~C~ 240 (284)
T d1ozna_ 230 LRLNDNPWVCD 240 (284)
T ss_dssp EECCSSCEECS
T ss_pred EEecCCCCCCC
Confidence 55555555443
No 8
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.91 E-value=1.2e-22 Score=207.46 Aligned_cols=83 Identities=25% Similarity=0.273 Sum_probs=52.2
Q ss_pred CccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeecccccCCcccchhccCCCCCCEEEcc
Q 037651 135 SLARLELGYNQLTGNLPISLGYLKNLRYLELWYNSFLGSIPPSIGNLTFLEELYLTSNQMNGKFPESFGQLSAIRVLELS 214 (750)
Q Consensus 135 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~ 214 (750)
..+.++-++++++ .+|..+. +++++|++++|+++...+.+|.++++|++|++++|.+....|..|.++++|++|+++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 4555666666666 4555442 466677777776664444556666777777777777665556666666667777776
Q ss_pred cCcCcc
Q 037651 215 DNQWEG 220 (750)
Q Consensus 215 ~n~l~~ 220 (750)
+|+++.
T Consensus 88 ~n~l~~ 93 (305)
T d1xkua_ 88 KNQLKE 93 (305)
T ss_dssp SSCCSB
T ss_pred CCccCc
Confidence 666554
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.4e-22 Score=200.35 Aligned_cols=201 Identities=25% Similarity=0.286 Sum_probs=136.6
Q ss_pred CCCCeEECccCccccccCccccCCCCCCEEeCCCCccceeCCccccCCCCCCEEEccCCcCcCCCCccccCCCCCCEEec
Q 037651 400 KQLLTLVISNNNLSGGIPQFLKNISSLYILDMTKNNFSGEIPESIGSLLTIRFLVLSNNHLSGEIPPSLKNCSLMDSLDL 479 (750)
Q Consensus 400 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 479 (750)
..+.+++.+++.++ .+|..+. +++++|+|++|++++..+..|..+++|++|+|++|+++. +| .+..+++|++|++
T Consensus 10 ~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~L 84 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDL 84 (266)
T ss_dssp TTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEEC
T ss_pred CCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-ccccccccccccc
Confidence 34444555555555 2444332 355666666666664444556666666666666666652 22 2455666777777
Q ss_pred CCCcccccCChhhhhcCCCCCEEEccCccceeecCccccCCCCCcEEEcccCcCCCcCCccccccccCccCCCCCccccC
Q 037651 480 GENQLSGNIPAWIGESMPSLSILRLRSNHFNGTIPSELCKLSALHILDLSHNNLSGPIPHCVGDFSAMKVKPPDTEIYQG 559 (750)
Q Consensus 480 ~~n~~~~~~p~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~~ 559 (750)
++|++. .++..+. .+++|+.|++++|.+.+..+..+..+.+++.|++++|.+++..+.
T Consensus 85 s~N~l~-~~~~~~~-~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~-------------------- 142 (266)
T d1p9ag_ 85 SHNQLQ-SLPLLGQ-TLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPG-------------------- 142 (266)
T ss_dssp CSSCCS-SCCCCTT-TCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTT--------------------
T ss_pred cccccc-ccccccc-cccccccccccccccceeeccccccccccccccccccccceeccc--------------------
Confidence 777766 3444443 377777777777777766666677778888888888877743222
Q ss_pred ceEEEEecceEeecccccccchhhhccccCCeEeccCCcCCCCcccccCCCccCcEEEccCCccCcCCCccccCCCCCCe
Q 037651 560 SLQVAIKGTQYVYQQTLYLMPVELTSLLHLGTLNLSGNQLVGKIPTQIGKLEWLESLDLSRNKLSGSIPPSMVSIRFLSF 639 (750)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 639 (750)
.+..++.++.|++++|++++..|+.|+.+++|+.|||++|+|+ .+|..+..+++|+.
T Consensus 143 ----------------------~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~ 199 (266)
T d1p9ag_ 143 ----------------------LLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPF 199 (266)
T ss_dssp ----------------------TTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSE
T ss_pred ----------------------cccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCE
Confidence 3456677888888888888877788888899999999999988 68888888888999
Q ss_pred EECcCCcceec
Q 037651 640 LNLSFNNLSGE 650 (750)
Q Consensus 640 l~ls~N~l~g~ 650 (750)
|++++|++.|.
T Consensus 200 L~L~~Np~~Cd 210 (266)
T d1p9ag_ 200 AFLHGNPWLCN 210 (266)
T ss_dssp EECCSCCBCCS
T ss_pred EEecCCCCCCC
Confidence 99999988753
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.88 E-value=3.9e-22 Score=198.76 Aligned_cols=202 Identities=27% Similarity=0.284 Sum_probs=175.9
Q ss_pred CCCCcCEEecCCCCCCCCCCCCCCCCCCCCcEEECCCCCCCCCccccccCCCCCCEEeCcCCCCcccCCcccCCCCCCCE
Q 037651 4 KLPSIVELHLPNSNLPILPIHFPSLNFTSLQVLDLSNNGFNSTIPHWLFNITNLLSLDLNSNDLQGDIPDGFASLNSLQL 83 (750)
Q Consensus 4 ~l~~L~~L~L~~~~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 83 (750)
+...+.+++.++++++.+|+..+ +++++|+|++|.|++..+.+|.++++|++|+|++|+++. +| .++.+++|++
T Consensus 8 ~~~~~~~v~C~~~~L~~iP~~lp----~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~ 81 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLTALPPDLP----KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGT 81 (266)
T ss_dssp CSTTCCEEECTTSCCSSCCSCCC----TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCE
T ss_pred ccCCCeEEEccCCCCCeeCcCcC----cCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-cccccccccc
Confidence 45677788999999999876222 689999999999998777889999999999999999984 44 4678999999
Q ss_pred EECcCCCCcccccccccCCCCCCCEEeCcCcccccccchhhhccccccCCCCccEEEccCCcCcccCCccccCCCCCcEE
Q 037651 84 LDLSGNSFLEGQLSRNLGTLCNLQTLKLSLNQFRGEVSDFIDGLSECINSSSLARLELGYNQLTGNLPISLGYLKNLRYL 163 (750)
Q Consensus 84 L~Ls~n~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 163 (750)
|++++|++ . ..+..+..+++|++|++++|.+....+..+..+. ++++|++++|.++...+..+..+++|+.+
T Consensus 82 L~Ls~N~l-~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~------~l~~L~l~~n~l~~l~~~~~~~l~~l~~l 153 (266)
T d1p9ag_ 82 LDLSHNQL-Q-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG------ELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (266)
T ss_dssp EECCSSCC-S-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCT------TCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cccccccc-c-ccccccccccccccccccccccceeecccccccc------ccccccccccccceeccccccccccchhc
Confidence 99999984 3 3467789999999999999999888877777776 99999999999997777778889999999
Q ss_pred EccCCcccccCCccccCCCCCCeeecccccCCcccchhccCCCCCCEEEcccCcCcc
Q 037651 164 ELWYNSFLGSIPPSIGNLTFLEELYLTSNQMNGKFPESFGQLSAIRVLELSDNQWEG 220 (750)
Q Consensus 164 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 220 (750)
++++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|+|++|++..
T Consensus 154 ~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 154 SLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp ECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence 99999999888888999999999999999999 788888889999999999998764
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.81 E-value=2.6e-17 Score=171.08 Aligned_cols=149 Identities=25% Similarity=0.296 Sum_probs=81.4
Q ss_pred CCCCcEEEeecccccCCCCcchhccCCCCCEEecCCCcCcccCCcCCcCCCCCCeEECccCccccccCccccCCCCCCEE
Q 037651 350 SSNLTKLYLRDNLFSGPIPNDLGQKTPFLTDLDISFNSLNGSIPQSVGNLKQLLTLVISNNNLSGGIPQFLKNISSLYIL 429 (750)
Q Consensus 350 ~~~L~~L~l~~n~l~~~i~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 429 (750)
++.++.+++++|... .++.. ..++..+.+.++.+..... ....+...++..+.+.+.. . -.......
T Consensus 203 l~~L~~l~l~~n~~~-~~~~~----~~~l~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~l~-~---l~~~~~~~ 269 (353)
T d1jl5a_ 203 LPFLTTIYADNNLLK-TLPDL----PPSLEALNVRDNYLTDLPE----LPQSLTFLDVSENIFSGLS-E---LPPNLYYL 269 (353)
T ss_dssp CTTCCEEECCSSCCS-SCCSC----CTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSEES-C---CCTTCCEE
T ss_pred ccccccccccccccc-ccccc----ccccccccccccccccccc----ccccccccccccccccccc-c---ccchhccc
Confidence 345555665555543 23321 3445666666665543211 1345555565555544211 0 11234455
Q ss_pred eCCCCccceeCCccccCCCCCCEEEccCCcCcCCCCccccCCCCCCEEecCCCcccccCChhhhhcCCCCCEEEccCccc
Q 037651 430 DMTKNNFSGEIPESIGSLLTIRFLVLSNNHLSGEIPPSLKNCSLMDSLDLGENQLSGNIPAWIGESMPSLSILRLRSNHF 509 (750)
Q Consensus 430 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~l~~L~~L~Ls~n~l 509 (750)
++..+.+.+. + ..+++|++|++++|+++ .+|.. +++|+.|++++|+++ .+|.. +++|+.|++++|++
T Consensus 270 ~~~~~~~~~~-~---~~~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~-~l~~~----~~~L~~L~L~~N~L 336 (353)
T d1jl5a_ 270 NASSNEIRSL-C---DLPPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLA-EVPEL----PQNLKQLHVEYNPL 336 (353)
T ss_dssp ECCSSCCSEE-C---CCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCC
T ss_pred ccccCccccc-c---ccCCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCC-ccccc----cCCCCEEECcCCcC
Confidence 6666655522 2 23467777777777776 45542 466777777777776 56642 56777788888877
Q ss_pred eeecCccccCCCCCcEEEc
Q 037651 510 NGTIPSELCKLSALHILDL 528 (750)
Q Consensus 510 ~~~~p~~l~~l~~L~~L~L 528 (750)
+ .+|... .+|+.|.+
T Consensus 337 ~-~lp~~~---~~L~~L~~ 351 (353)
T d1jl5a_ 337 R-EFPDIP---ESVEDLRM 351 (353)
T ss_dssp S-SCCCCC---TTCCEEEC
T ss_pred C-CCCccc---cccCeeEC
Confidence 6 556432 34555554
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.80 E-value=4.4e-17 Score=169.26 Aligned_cols=178 Identities=25% Similarity=0.280 Sum_probs=105.2
Q ss_pred CcCEEecCCCCCCCCCCCCCCCCCCCCcEEECCCCCCCCCccccccCCCCCCEEeCcCCCCcccCCcccCCC-CCCCEEE
Q 037651 7 SIVELHLPNSNLPILPIHFPSLNFTSLQVLDLSNNGFNSTIPHWLFNITNLLSLDLNSNDLQGDIPDGFASL-NSLQLLD 85 (750)
Q Consensus 7 ~L~~L~L~~~~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l-~~L~~L~ 85 (750)
++++|+|++++++.+|+ . +++|++|+|++|+|+ .+|+. ..+|+.|++++|+++. ++ .+ +.|++|+
T Consensus 39 ~l~~LdLs~~~L~~lp~-~----~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~-l~----~lp~~L~~L~ 104 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPE-L----PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKA-LS----DLPPLLEYLG 104 (353)
T ss_dssp TCSEEECTTSCCSCCCS-C----CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC----SCCTTCCEEE
T ss_pred CCCEEEeCCCCCCCCCC-C----CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccch-hh----hhcccccccc
Confidence 57788888888877764 1 367888888888886 44543 3567788888887762 23 22 3578888
Q ss_pred CcCCCCcccccccccCCCCCCCEEeCcCcccccccchhhhccccccCCCCccEEEccCCcCcccCCccccCCCCCcEEEc
Q 037651 86 LSGNSFLEGQLSRNLGTLCNLQTLKLSLNQFRGEVSDFIDGLSECINSSSLARLELGYNQLTGNLPISLGYLKNLRYLEL 165 (750)
Q Consensus 86 Ls~n~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 165 (750)
+++|.+ . .+|. ++.+++|++|+++++.+...... . ..+..+.+.++... .+..+..++.++.+++
T Consensus 105 L~~n~l-~-~lp~-~~~l~~L~~L~l~~~~~~~~~~~----~------~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l 169 (353)
T d1jl5a_ 105 VSNNQL-E-KLPE-LQNSSFLKIIDVDNNSLKKLPDL----P------PSLEFIAAGNNQLE--ELPELQNLPFLTAIYA 169 (353)
T ss_dssp CCSSCC-S-SCCC-CTTCTTCCEEECCSSCCSCCCCC----C------TTCCEEECCSSCCS--SCCCCTTCTTCCEEEC
T ss_pred cccccc-c-cccc-hhhhccceeeccccccccccccc----c------ccccchhhcccccc--ccccccccccceeccc
Confidence 888774 2 2443 56777788888877776543221 1 15666666655544 2344556667777777
Q ss_pred cCCcccccCCccccCCCCCCeeecccccCCcccchhccCCCCCCEEEcccCcCc
Q 037651 166 WYNSFLGSIPPSIGNLTFLEELYLTSNQMNGKFPESFGQLSAIRVLELSDNQWE 219 (750)
Q Consensus 166 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 219 (750)
++|.... .+. .....+.+....+.+. .++ .+..++.|+.+++++|...
T Consensus 170 ~~n~~~~-~~~---~~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~ 217 (353)
T d1jl5a_ 170 DNNSLKK-LPD---LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK 217 (353)
T ss_dssp CSSCCSS-CCC---CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCS
T ss_pred ccccccc-ccc---cccccccccccccccc-ccc-ccccccccccccccccccc
Confidence 7766542 221 1222344444444443 222 2445666666666665543
No 13
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=1e-20 Score=204.83 Aligned_cols=39 Identities=23% Similarity=0.260 Sum_probs=20.3
Q ss_pred CCCCCeEECccCccccc----cCccccCCCCCCEEeCCCCccc
Q 037651 399 LKQLLTLVISNNNLSGG----IPQFLKNISSLYILDMTKNNFS 437 (750)
Q Consensus 399 l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~ 437 (750)
...++.+++++|.+... ....+...+.++.+++++|.++
T Consensus 254 ~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~ 296 (460)
T d1z7xw1 254 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 296 (460)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc
Confidence 44566666666655422 1223344555666666666554
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.76 E-value=3.7e-18 Score=165.26 Aligned_cols=188 Identities=22% Similarity=0.349 Sum_probs=115.8
Q ss_pred cCCCCCCeEECccCccccccCccccCCCCCCEEeCCCCccceeCCccccCCCCCCEEEccCCcCcCCCCccccCCCCCCE
Q 037651 397 GNLKQLLTLVISNNNLSGGIPQFLKNISSLYILDMTKNNFSGEIPESIGSLLTIRFLVLSNNHLSGEIPPSLKNCSLMDS 476 (750)
Q Consensus 397 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 476 (750)
.++.+|++|++.+|.++.. ..+..+++|++|++++|++++..| +..+++|+++++++|.++ .++ .+..+++|+.
T Consensus 38 ~~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~ 111 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK-NVS-AIAGLQSIKT 111 (227)
T ss_dssp HHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCE
T ss_pred HHcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc-ccc-cccccccccc
Confidence 3355666666666666532 235666666666666666653322 556666666666666665 222 3566667777
Q ss_pred EecCCCcccccCChhhhhcCCCCCEEEccCccceeecCccccCCCCCcEEEcccCcCCCcCCccccccccCccCCCCCcc
Q 037651 477 LDLGENQLSGNIPAWIGESMPSLSILRLRSNHFNGTIPSELCKLSALHILDLSHNNLSGPIPHCVGDFSAMKVKPPDTEI 556 (750)
Q Consensus 477 L~L~~n~~~~~~p~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~l~~~~~~~~~ 556 (750)
+++++|...+ ++. +. ..+.++.+.++++.+.... .+...++|+.|++++|.+++.
T Consensus 112 l~l~~~~~~~-~~~-~~-~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~-------------------- 166 (227)
T d1h6ua2 112 LDLTSTQITD-VTP-LA-GLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDL-------------------- 166 (227)
T ss_dssp EECTTSCCCC-CGG-GT-TCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCC--------------------
T ss_pred cccccccccc-cch-hc-cccchhhhhchhhhhchhh--hhccccccccccccccccccc--------------------
Confidence 7777666652 222 11 2566777777777665332 355667777777777766531
Q ss_pred ccCceEEEEecceEeecccccccchhhhccccCCeEeccCCcCCCCcccccCCCccCcEEEccCCccCcCCCccccCCCC
Q 037651 557 YQGSLQVAIKGTQYVYQQTLYLMPVELTSLLHLGTLNLSGNQLVGKIPTQIGKLEWLESLDLSRNKLSGSIPPSMVSIRF 636 (750)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 636 (750)
..++++++|++|+|++|++++ +|. ++++++|+.|+|++|++++ +| .++++++
T Consensus 167 ------------------------~~l~~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~~L~Ls~N~lt~-i~-~l~~l~~ 218 (227)
T d1h6ua2 167 ------------------------TPLANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQISD-VS-PLANTSN 218 (227)
T ss_dssp ------------------------GGGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSCCCB-CG-GGTTCTT
T ss_pred ------------------------hhhcccccceecccCCCccCC-Chh-hcCCCCCCEEECcCCcCCC-Cc-ccccCCC
Confidence 125566677777777777764 332 6777777888888877775 33 2677777
Q ss_pred CCeEECc
Q 037651 637 LSFLNLS 643 (750)
Q Consensus 637 L~~l~ls 643 (750)
|++|+++
T Consensus 219 L~~L~ls 225 (227)
T d1h6ua2 219 LFIVTLT 225 (227)
T ss_dssp CCEEEEE
T ss_pred CCEEEee
Confidence 8777776
No 15
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=9e-21 Score=205.32 Aligned_cols=110 Identities=29% Similarity=0.276 Sum_probs=50.1
Q ss_pred CcCEEecCCCCCCCCCCCCCCCCCCCCcEEECCCCCCCC----CccccccCCCCCCEEeCcCCCCccc----CCcccC-C
Q 037651 7 SIVELHLPNSNLPILPIHFPSLNFTSLQVLDLSNNGFNS----TIPHWLFNITNLLSLDLNSNDLQGD----IPDGFA-S 77 (750)
Q Consensus 7 ~L~~L~L~~~~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~----~~~~~~~~l~~L~~L~Ls~n~i~~~----~~~~~~-~ 77 (750)
+|++||++++++++......+..++++++|+|++|.++. .++..+..+++|++|||++|.++.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 455555555555543211122334555555555555542 1233344555555555555555321 111121 1
Q ss_pred CCCCCEEECcCCCCcccc----cccccCCCCCCCEEeCcCcccc
Q 037651 78 LNSLQLLDLSGNSFLEGQ----LSRNLGTLCNLQTLKLSLNQFR 117 (750)
Q Consensus 78 l~~L~~L~Ls~n~~~~~~----~~~~l~~l~~L~~L~Ls~n~l~ 117 (750)
..+|++|++++|. ++.. ++..+..+++|++|++++|.+.
T Consensus 83 ~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCC-ccccccccccchhhccccccccccccccch
Confidence 2345555555555 2211 2233445555555555555544
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=3.5e-17 Score=158.31 Aligned_cols=203 Identities=24% Similarity=0.352 Sum_probs=157.6
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCcEEECCCCCCCCCccccccCCCCCCEEeCcCCCCcccCCcccCCCCCCCEEECcCCC
Q 037651 11 LHLPNSNLPILPIHFPSLNFTSLQVLDLSNNGFNSTIPHWLFNITNLLSLDLNSNDLQGDIPDGFASLNSLQLLDLSGNS 90 (750)
Q Consensus 11 L~L~~~~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 90 (750)
+++..+++++.. ....+.+|++|++.+|.|+.. + .+..+++|++|++++|.+.+..| +..+++|+++++++|.
T Consensus 24 ~~l~~~~~~d~~---~~~~l~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~ 96 (227)
T d1h6ua2 24 IAAGKSNVTDTV---TQADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (227)
T ss_dssp HHTTCSSTTSEE---CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHhCCCCcCCcC---CHHHcCCcCEEECCCCCCCcc-h-hHhcCCCCcEeecCCceeecccc--cccccccccccccccc
Confidence 456666666653 456678899999999998754 3 48899999999999999885543 8899999999999987
Q ss_pred CcccccccccCCCCCCCEEeCcCcccccccchhhhccccccCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcc
Q 037651 91 FLEGQLSRNLGTLCNLQTLKLSLNQFRGEVSDFIDGLSECINSSSLARLELGYNQLTGNLPISLGYLKNLRYLELWYNSF 170 (750)
Q Consensus 91 ~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l 170 (750)
+ + .+ ..+.++++|++++++++...+..+ +...+ .++.+.++.+.+... ..+..+++|++|++++|.+
T Consensus 97 ~-~-~i-~~l~~l~~L~~l~l~~~~~~~~~~--~~~~~------~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~ 163 (227)
T d1h6ua2 97 L-K-NV-SAIAGLQSIKTLDLTSTQITDVTP--LAGLS------NLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQV 163 (227)
T ss_dssp C-S-CC-GGGTTCTTCCEEECTTSCCCCCGG--GTTCT------TCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCC
T ss_pred c-c-cc-ccccccccccccccccccccccch--hcccc------chhhhhchhhhhchh--hhhcccccccccccccccc
Confidence 3 3 23 357889999999999888765432 33333 888999998888743 3467888999999999988
Q ss_pred cccCCccccCCCCCCeeecccccCCcccchhccCCCCCCEEEcccCcCccccChhhhcCCCCCCEEeccc
Q 037651 171 LGSIPPSIGNLTFLEELYLTSNQMNGKFPESFGQLSAIRVLELSDNQWEGFITEAHLRNLTSLEELSLIK 240 (750)
Q Consensus 171 ~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~ 240 (750)
.+. ..++++++|++|++++|++++ ++ .++++++|++|++++|++++. + .++++++|++|++++
T Consensus 164 ~~~--~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i-~--~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 164 SDL--TPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDV-S--PLANTSNLFIVTLTN 226 (227)
T ss_dssp CCC--GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBC-G--GGTTCTTCCEEEEEE
T ss_pred ccc--hhhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCC-c--ccccCCCCCEEEeeC
Confidence 743 337889999999999999985 33 388899999999999998863 3 378899999998864
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.1e-17 Score=163.74 Aligned_cols=221 Identities=18% Similarity=0.079 Sum_probs=167.5
Q ss_pred cCEEecCCCCCCCCCCCCCCCCCCCCcEEECCCCCCCCCccccccCCCCCCEEeCcCCCCccc-CCcccCCCCCCCEEEC
Q 037651 8 IVELHLPNSNLPILPIHFPSLNFTSLQVLDLSNNGFNSTIPHWLFNITNLLSLDLNSNDLQGD-IPDGFASLNSLQLLDL 86 (750)
Q Consensus 8 L~~L~L~~~~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~L 86 (750)
-+.++.++.+++.+|... .+++++|++++|.|+...+.+|.++++|++|++++|.+... .+.+|.++++++++++
T Consensus 10 ~~~i~c~~~~l~~iP~~l----~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~ 85 (242)
T d1xwdc1 10 NRVFLCQESKVTEIPSDL----PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 85 (242)
T ss_dssp SSEEEEESCSCSSCCSCS----CSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEE
T ss_pred CCEEEEeCCCCCCcCCCC----CCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccc
Confidence 367889999999887622 26899999999999877677899999999999999998754 4567899999999998
Q ss_pred cCCCCcccccccccCCCCCCCEEeCcCcccccccch-hhhccccccCCCCccEEEccCCcCcccCCccccCCC-CCcEEE
Q 037651 87 SGNSFLEGQLSRNLGTLCNLQTLKLSLNQFRGEVSD-FIDGLSECINSSSLARLELGYNQLTGNLPISLGYLK-NLRYLE 164 (750)
Q Consensus 87 s~n~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~-~l~~l~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~ 164 (750)
..+.-.....+..|.++++|+++++++|.+....+. .+..+ ..+..+..+++.+....+..+..++ .++.|+
T Consensus 86 ~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l------~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~ 159 (242)
T d1xwdc1 86 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSL------QKVLLDIQDNINIHTIERNSFVGLSFESVILW 159 (242)
T ss_dssp ECCTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBS------SCEEEEEESCTTCCEECTTSSTTSBSSCEEEE
T ss_pred cccccccccccccccccccccccccchhhhcccccccccccc------cccccccccccccccccccccccccccceeee
Confidence 764325556677789999999999999998754332 22223 3777777788888766666677664 789999
Q ss_pred ccCCcccccCCccccCCCCCCee-ecccccCCcccchhccCCCCCCEEEcccCcCccccChhhhcCCCCCCEEeccc
Q 037651 165 LWYNSFLGSIPPSIGNLTFLEEL-YLTSNQMNGKFPESFGQLSAIRVLELSDNQWEGFITEAHLRNLTSLEELSLIK 240 (750)
Q Consensus 165 L~~n~l~~~~p~~l~~l~~L~~L-~Ls~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~l~~L~~L~l~~ 240 (750)
+++|+++...+..+ ..++++++ ++++|+++...+..|.++++|++|++++|+++. +|...+.++++|+.+++..
T Consensus 160 l~~n~l~~i~~~~~-~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~-l~~~~~~~l~~L~~l~~~~ 234 (242)
T d1xwdc1 160 LNKNGIQEIHNCAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHS-LPSYGLENLKKLRARSTYN 234 (242)
T ss_dssp CCSSCCCEECTTTT-TTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCC-CCSSSCTTCCEEESSSEES
T ss_pred cccccccccccccc-cchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCc-cCHHHHcCCcccccCcCCC
Confidence 99999986555444 45555555 578888885555568899999999999999985 5555666666666655543
No 18
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=2.3e-17 Score=161.53 Aligned_cols=105 Identities=21% Similarity=0.299 Sum_probs=64.0
Q ss_pred CcEEEeecccccCCCCcchhccCCCCCEEecCCCcCcccCCcCCcCCCCCCeEECccCcccccc-CccccCCCCCCEEeC
Q 037651 353 LTKLYLRDNLFSGPIPNDLGQKTPFLTDLDISFNSLNGSIPQSVGNLKQLLTLVISNNNLSGGI-PQFLKNISSLYILDM 431 (750)
Q Consensus 353 L~~L~l~~n~l~~~i~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~l~~l~~L~~L~L 431 (750)
-+.++.++..++ .+|..+. +++++|++++|+++...+.+|.++++|++|++++|.+...+ +..|.+++.++++.+
T Consensus 10 ~~~i~c~~~~l~-~iP~~l~---~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~ 85 (242)
T d1xwdc1 10 NRVFLCQESKVT-EIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 85 (242)
T ss_dssp SSEEEEESCSCS-SCCSCSC---SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEE
T ss_pred CCEEEEeCCCCC-CcCCCCC---CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccc
Confidence 356777777776 6776542 35677777777766555556666667777777666665433 345566666666665
Q ss_pred CC-CccceeCCccccCCCCCCEEEccCCcCc
Q 037651 432 TK-NNFSGEIPESIGSLLTIRFLVLSNNHLS 461 (750)
Q Consensus 432 s~-n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 461 (750)
.. |.+....+..|..+++|+.+++++|++.
T Consensus 86 ~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l~ 116 (242)
T d1xwdc1 86 EKANNLLYINPEAFQNLPNLQYLLISNTGIK 116 (242)
T ss_dssp ECCTTCCEECTTSEECCTTCCEEEEESCCCC
T ss_pred cccccccccccccccccccccccccchhhhc
Confidence 43 4555455555556666666666666554
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=5.2e-17 Score=154.68 Aligned_cols=165 Identities=25% Similarity=0.354 Sum_probs=94.4
Q ss_pred CCCCCEEeCCCCccceeCCccccCCCCCCEEEccCCcCcCCCCccccCCCCCCEEecCCCcccccCChhhhhcCCCCCEE
Q 037651 423 ISSLYILDMTKNNFSGEIPESIGSLLTIRFLVLSNNHLSGEIPPSLKNCSLMDSLDLGENQLSGNIPAWIGESMPSLSIL 502 (750)
Q Consensus 423 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~l~~L~~L 502 (750)
+.+|++|++++|.++. ++ .+..+++|++|++++|++++. + .+..+++|+.|++++|+++ .+|. +. .+++|+.|
T Consensus 45 L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~-~l~~-l~-~l~~L~~L 117 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVK-DLSS-LK-DLKKLKSL 117 (210)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC-CGGG-GT-TCTTCCEE
T ss_pred hcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccCc-c-ccccCcccccccccccccc-cccc-cc-cccccccc
Confidence 3455555555555542 22 244555555555555555532 2 2455566666666666655 3442 22 25666666
Q ss_pred EccCccceeecCccccCCCCCcEEEcccCcCCCcCCccccccccCccCCCCCccccCceEEEEecceEeecccccccchh
Q 037651 503 RLRSNHFNGTIPSELCKLSALHILDLSHNNLSGPIPHCVGDFSAMKVKPPDTEIYQGSLQVAIKGTQYVYQQTLYLMPVE 582 (750)
Q Consensus 503 ~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 582 (750)
++++|.+. .+ ..+..++.++.+++++|.+++. ..
T Consensus 118 ~l~~~~~~-~~-~~l~~l~~l~~l~~~~n~l~~~--------------------------------------------~~ 151 (210)
T d1h6ta2 118 SLEHNGIS-DI-NGLVHLPQLESLYLGNNKITDI--------------------------------------------TV 151 (210)
T ss_dssp ECTTSCCC-CC-GGGGGCTTCCEEECCSSCCCCC--------------------------------------------GG
T ss_pred cccccccc-cc-cccccccccccccccccccccc--------------------------------------------cc
Confidence 66666654 22 2455666666666666666521 12
Q ss_pred hhccccCCeEeccCCcCCCCcccccCCCccCcEEEccCCccCcCCCccccCCCCCCeEECcC
Q 037651 583 LTSLLHLGTLNLSGNQLVGKIPTQIGKLEWLESLDLSRNKLSGSIPPSMVSIRFLSFLNLSF 644 (750)
Q Consensus 583 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~ 644 (750)
+..+++|+.+++++|++++. +. ++++++|+.|++++|+++. +| .+..+++|++|++++
T Consensus 152 ~~~l~~L~~l~l~~n~l~~i-~~-l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 152 LSRLTKLDTLSLEDNQISDI-VP-LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp GGGCTTCSEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred cccccccccccccccccccc-cc-ccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 44556677777777777643 32 6677777777777777763 44 467777777777753
No 20
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.70 E-value=1.8e-17 Score=155.55 Aligned_cols=173 Identities=23% Similarity=0.249 Sum_probs=131.1
Q ss_pred CcEEEeecccccCCCCcchhccCCCCCEEecCCCcCccc-CCcCCcCCCCCCeEECccCccccccCccccCCCCCCEEeC
Q 037651 353 LTKLYLRDNLFSGPIPNDLGQKTPFLTDLDISFNSLNGS-IPQSVGNLKQLLTLVISNNNLSGGIPQFLKNISSLYILDM 431 (750)
Q Consensus 353 L~~L~l~~n~l~~~i~~~~~~~~~~L~~L~ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 431 (750)
.++++.++++++ .+|..+ .+++++|+|++|++++. .+..|.++++|++|++++|.+.+..+..+..+++|++|++
T Consensus 10 ~~~v~Cs~~~L~-~iP~~l---p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L 85 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDI---PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp TTEEECTTSCCS-SCCSCC---CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCEEEEeCCCcC-ccCCCC---CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeee
Confidence 346677777776 677655 35678888888888753 4566778888888888888888888888888888888888
Q ss_pred CCCccceeCCccccCCCCCCEEEccCCcCcCCCCccccCCCCCCEEecCCCcccccCChhhhhcCCCCCEEEccCcccee
Q 037651 432 TKNNFSGEIPESIGSLLTIRFLVLSNNHLSGEIPPSLKNCSLMDSLDLGENQLSGNIPAWIGESMPSLSILRLRSNHFNG 511 (750)
Q Consensus 432 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~l~~L~~L~Ls~n~l~~ 511 (750)
++|++.+..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++....+...+ ...++.+.+..+.+..
T Consensus 86 s~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~--~~~l~~~~l~~~~~~c 163 (192)
T d1w8aa_ 86 GENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF--AEWLRKKSLNGGAARC 163 (192)
T ss_dssp CSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH--HHHHHHHCCSGGGCBB
T ss_pred ccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHH--hhhhhhhcccCCCeEe
Confidence 88888877777888888999999999998877788888899999999999988743332222 2345666777777776
Q ss_pred ecCccccCCCCCcEEEcccCcCC
Q 037651 512 TIPSELCKLSALHILDLSHNNLS 534 (750)
Q Consensus 512 ~~p~~l~~l~~L~~L~Ls~n~l~ 534 (750)
..|.. +..++.+||+.|.+.
T Consensus 164 ~~p~~---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 164 GAPSK---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp CSSTT---TTTSBGGGSCTTTCC
T ss_pred CCChh---hcCCEeeecCHhhCc
Confidence 66654 455677788888775
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70 E-value=1.6e-16 Score=151.27 Aligned_cols=180 Identities=27% Similarity=0.307 Sum_probs=140.9
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCcEEECCCCCCCCCccccccCCCCCCEEeCcCCCCcccCCcccCCCCCCCEEECcCCCC
Q 037651 12 HLPNSNLPILPIHFPSLNFTSLQVLDLSNNGFNSTIPHWLFNITNLLSLDLNSNDLQGDIPDGFASLNSLQLLDLSGNSF 91 (750)
Q Consensus 12 ~L~~~~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~~ 91 (750)
.+....+++.+. ...+.+|++|++++|.+++.. .+..+++|++|++++|++++. + .++.+++|++|++++|++
T Consensus 30 ~l~~~~~~~~~~---~~~L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i 102 (210)
T d1h6ta2 30 NLKKKSVTDAVT---QNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKV 102 (210)
T ss_dssp HTTCSCTTSEEC---HHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCC
T ss_pred HhCcCccCCccC---HHHhcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCc-c-ccccCccccccccccccc
Confidence 445555555433 235678999999999987543 378899999999999999854 3 378899999999999984
Q ss_pred cccccccccCCCCCCCEEeCcCcccccccchhhhccccccCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCccc
Q 037651 92 LEGQLSRNLGTLCNLQTLKLSLNQFRGEVSDFIDGLSECINSSSLARLELGYNQLTGNLPISLGYLKNLRYLELWYNSFL 171 (750)
Q Consensus 92 ~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 171 (750)
+. ++ .+..+++|+.|++++|.+... ..+..++ +++.+++++|.+++ +..+..+++|+++++++|++.
T Consensus 103 -~~-l~-~l~~l~~L~~L~l~~~~~~~~--~~l~~l~------~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~ 169 (210)
T d1h6ta2 103 -KD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLP------QLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIS 169 (210)
T ss_dssp -CC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCT------TCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCC
T ss_pred -cc-cc-ccccccccccccccccccccc--ccccccc------cccccccccccccc--ccccccccccccccccccccc
Confidence 32 44 588899999999999987643 3455555 89999999999874 345778899999999999988
Q ss_pred ccCCccccCCCCCCeeecccccCCcccchhccCCCCCCEEEccc
Q 037651 172 GSIPPSIGNLTFLEELYLTSNQMNGKFPESFGQLSAIRVLELSD 215 (750)
Q Consensus 172 ~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~~ 215 (750)
+. + .++++++|++|++++|+++. ++ .+.++++|++|++++
T Consensus 170 ~i-~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 170 DI-V-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp CC-G-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred cc-c-cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 53 3 38899999999999999984 44 588999999999874
No 22
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=1.9e-16 Score=149.35 Aligned_cols=147 Identities=27% Similarity=0.360 Sum_probs=64.5
Q ss_pred CCCCcEEECCCCCCCCCccccccCCCCCCEEeCcCCCCcccCCcccCCCCCCCEEECcCCCCcccccccccCCCCCCCEE
Q 037651 30 FTSLQVLDLSNNGFNSTIPHWLFNITNLLSLDLNSNDLQGDIPDGFASLNSLQLLDLSGNSFLEGQLSRNLGTLCNLQTL 109 (750)
Q Consensus 30 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~~L 109 (750)
++++++|++++|.++.. +.+..+++|++|++++|++++..| ++++++|++|++++|.+.. ++ .++++++|++|
T Consensus 39 l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~--~~-~l~~l~~L~~L 111 (199)
T d2omxa2 39 LDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD--IT-PLANLTNLTGL 111 (199)
T ss_dssp HTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC--CG-GGTTCTTCSEE
T ss_pred hcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCccc--ccCCccccccccccccccc--cc-ccccccccccc
Confidence 44555555555555432 124455555555555555553221 4555555555555554211 11 24455555555
Q ss_pred eCcCcccccccchhhhccccccCCCCccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeec
Q 037651 110 KLSLNQFRGEVSDFIDGLSECINSSSLARLELGYNQLTGNLPISLGYLKNLRYLELWYNSFLGSIPPSIGNLTFLEELYL 189 (750)
Q Consensus 110 ~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 189 (750)
++++|...... .+..++ +|+.|++++|++.. + ..+..+++|++|++.+|++++. + .++++++|++|++
T Consensus 112 ~l~~~~~~~~~--~~~~l~------~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~l 179 (199)
T d2omxa2 112 TLFNNQITDID--PLKNLT------NLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDI 179 (199)
T ss_dssp ECCSSCCCCCG--GGTTCT------TCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEEC
T ss_pred ccccccccccc--ccchhh------hhHHhhhhhhhhcc-c-ccccccccccccccccccccCC-c-cccCCCCCCEEEC
Confidence 55554443321 122222 44444444444431 1 1244444444444444444322 1 1344444444444
Q ss_pred ccccCC
Q 037651 190 TSNQMN 195 (750)
Q Consensus 190 s~n~l~ 195 (750)
++|+++
T Consensus 180 s~N~i~ 185 (199)
T d2omxa2 180 SSNKVS 185 (199)
T ss_dssp CSSCCC
T ss_pred CCCCCC
Confidence 444444
No 23
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=4.9e-16 Score=146.47 Aligned_cols=162 Identities=30% Similarity=0.400 Sum_probs=135.8
Q ss_pred CCCCcCEEecCCCCCCCCCCCCCCCCCCCCcEEECCCCCCCCCccccccCCCCCCEEeCcCCCCcccCCcccCCCCCCCE
Q 037651 4 KLPSIVELHLPNSNLPILPIHFPSLNFTSLQVLDLSNNGFNSTIPHWLFNITNLLSLDLNSNDLQGDIPDGFASLNSLQL 83 (750)
Q Consensus 4 ~l~~L~~L~L~~~~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 83 (750)
.++++++|++++++++.+. .+..+++|++|++++|.+++..+ +.++++|++|++++|.+.. ++ .++++++|++
T Consensus 38 ~l~~l~~L~l~~~~i~~l~---~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~ 110 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSID---GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTG 110 (199)
T ss_dssp HHTTCCEEECTTSCCCCCT---TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSE
T ss_pred HhcCCCEEECCCCCCCCcc---ccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-cccccccccc
Confidence 3678999999999999874 47789999999999999987543 9999999999999999884 33 4899999999
Q ss_pred EECcCCCCcccccccccCCCCCCCEEeCcCcccccccchhhhccccccCCCCccEEEccCCcCcccCCccccCCCCCcEE
Q 037651 84 LDLSGNSFLEGQLSRNLGTLCNLQTLKLSLNQFRGEVSDFIDGLSECINSSSLARLELGYNQLTGNLPISLGYLKNLRYL 163 (750)
Q Consensus 84 L~Ls~n~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 163 (750)
|++++|.. .. ...+..+++|++|++++|++... ..+..++ +|++|++++|++++ ++ .++++++|++|
T Consensus 111 L~l~~~~~-~~--~~~~~~l~~L~~L~l~~n~l~~~--~~l~~~~------~L~~L~l~~n~l~~-l~-~l~~l~~L~~L 177 (199)
T d2omxa2 111 LTLFNNQI-TD--IDPLKNLTNLNRLELSSNTISDI--SALSGLT------SLQQLNFSSNQVTD-LK-PLANLTTLERL 177 (199)
T ss_dssp EECCSSCC-CC--CGGGTTCTTCSEEECCSSCCCCC--GGGTTCT------TCSEEECCSSCCCC-CG-GGTTCTTCCEE
T ss_pred cccccccc-cc--ccccchhhhhHHhhhhhhhhccc--ccccccc------cccccccccccccC-Cc-cccCCCCCCEE
Confidence 99999983 32 34588999999999999998753 2455555 99999999999985 33 48999999999
Q ss_pred EccCCcccccCCccccCCCCCCee
Q 037651 164 ELWYNSFLGSIPPSIGNLTFLEEL 187 (750)
Q Consensus 164 ~L~~n~l~~~~p~~l~~l~~L~~L 187 (750)
++++|++++ ++ .++++++|++|
T Consensus 178 ~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 178 DISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp ECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred ECCCCCCCC-Cc-cccCCCCCCcC
Confidence 999999885 44 48888888876
No 24
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.67 E-value=4.9e-17 Score=152.51 Aligned_cols=172 Identities=19% Similarity=0.236 Sum_probs=138.1
Q ss_pred eEECCCCCCCCCCCCCCCCCcEEEeecccccCCCCcchhccCCCCCEEecCCCcCcccCCcCCcCCCCCCeEECccCccc
Q 037651 334 SVDLSSNRFEGPLPLWSSNLTKLYLRDNLFSGPIPNDLGQKTPFLTDLDISFNSLNGSIPQSVGNLKQLLTLVISNNNLS 413 (750)
Q Consensus 334 ~l~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~i~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 413 (750)
.++.++++++..++..++++++|++++|.|++.++...+..+++|++|++++|.+....+..+..+++|++|++++|++.
T Consensus 12 ~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~ 91 (192)
T d1w8aa_ 12 TVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK 91 (192)
T ss_dssp EEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCC
T ss_pred EEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccccc
Confidence 34555555543322235689999999999987788888788999999999999999999999999999999999999999
Q ss_pred cccCccccCCCCCCEEeCCCCccceeCCccccCCCCCCEEEccCCcCcCCCCccccCCCCCCEEecCCCcccccCChhhh
Q 037651 414 GGIPQFLKNISSLYILDMTKNNFSGEIPESIGSLLTIRFLVLSNNHLSGEIPPSLKNCSLMDSLDLGENQLSGNIPAWIG 493 (750)
Q Consensus 414 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~ 493 (750)
+..+.+|.++++|++|+|++|++++..+.+|..+++|++|+|++|.+....+..+ -...++.+.+..+.+....|..
T Consensus 92 ~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~-~~~~l~~~~l~~~~~~c~~p~~-- 168 (192)
T d1w8aa_ 92 EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAPSK-- 168 (192)
T ss_dssp EECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSSTT--
T ss_pred ccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHH-HhhhhhhhcccCCCeEeCCChh--
Confidence 8888899999999999999999998888889999999999999999875433211 1123555667778877666754
Q ss_pred hcCCCCCEEEccCccce
Q 037651 494 ESMPSLSILRLRSNHFN 510 (750)
Q Consensus 494 ~~l~~L~~L~Ls~n~l~ 510 (750)
+..++.++++.|.+.
T Consensus 169 --l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 169 --VRDVQIKDLPHSEFK 183 (192)
T ss_dssp --TTTSBGGGSCTTTCC
T ss_pred --hcCCEeeecCHhhCc
Confidence 556777788888776
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=2e-15 Score=150.68 Aligned_cols=80 Identities=11% Similarity=0.040 Sum_probs=47.7
Q ss_pred ccEEEccCCcCcccCCccccCCCCCcEEEccCCccccc-CCccccCCCCCCeeecccccCCcccchhccCCCCCCEEEcc
Q 037651 136 LARLELGYNQLTGNLPISLGYLKNLRYLELWYNSFLGS-IPPSIGNLTFLEELYLTSNQMNGKFPESFGQLSAIRVLELS 214 (750)
Q Consensus 136 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L~ 214 (750)
...+.++...+... ........+|++||+++|.+... ++..+.++++|++|++++|.+++..+..++++++|++|+++
T Consensus 25 ~~~lrl~~~~~~~~-~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls 103 (284)
T d2astb2 25 VIAFRCPRSFMDQP-LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 103 (284)
T ss_dssp CSEEECTTCEECSC-CCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred ceEeeccccccccc-hhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCcccc
Confidence 44555555444322 12233445677777777766543 23345667777777777777766666666777777777777
Q ss_pred cC
Q 037651 215 DN 216 (750)
Q Consensus 215 ~n 216 (750)
++
T Consensus 104 ~c 105 (284)
T d2astb2 104 GC 105 (284)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=4.1e-15 Score=148.44 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=21.4
Q ss_pred hhccCCcccEEEcCCCCcCCCcChHHHhhcCCCcEEEcCCCcCCCcC
Q 037651 277 WLRNQTELTTLVLNGASISDTLPSWFWQLNLTLDELDVGGNHLSGRI 323 (750)
Q Consensus 277 ~l~~~~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 323 (750)
.++.+++|+.|++++| +.+..-..+...+|+| ++..++++...
T Consensus 220 ~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L---~i~~~~ls~~~ 262 (284)
T d2astb2 220 ELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHL---QINCSHFTTIA 262 (284)
T ss_dssp GGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTS---EESCCCSCCTT
T ss_pred HHhcCCCCCEEeeeCC-CCHHHHHHHHHhCccc---cccCccCCCCC
Confidence 3555666777777666 3333333333333443 34555555433
No 27
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.49 E-value=5.8e-15 Score=152.32 Aligned_cols=236 Identities=19% Similarity=0.205 Sum_probs=136.0
Q ss_pred CCCCCEEecCCCcCccc----CCcCCcCCCCCCeEECccCcccc----------ccCccccCCCCCCEEeCCCCccceeC
Q 037651 375 TPFLTDLDISFNSLNGS----IPQSVGNLKQLLTLVISNNNLSG----------GIPQFLKNISSLYILDMTKNNFSGEI 440 (750)
Q Consensus 375 ~~~L~~L~ls~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~----------~~~~~l~~l~~L~~L~Ls~n~l~~~~ 440 (750)
...|++|++++|.+... +...+...++|+.++++++.... .+...+..+++|+.|++++|.++...
T Consensus 30 ~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 109 (344)
T d2ca6a1 30 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 109 (344)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccccc
Confidence 34455555555444321 12233445556666665543221 11223445666777777766665432
Q ss_pred ----CccccCCCCCCEEEccCCcCcCCCCc-------------cccCCCCCCEEecCCCccccc----CChhhhhcCCCC
Q 037651 441 ----PESIGSLLTIRFLVLSNNHLSGEIPP-------------SLKNCSLMDSLDLGENQLSGN----IPAWIGESMPSL 499 (750)
Q Consensus 441 ----~~~~~~l~~L~~L~L~~n~l~~~~~~-------------~~~~l~~L~~L~L~~n~~~~~----~p~~~~~~l~~L 499 (750)
...+...++|+.|++++|.+...... .....+.|+.+++++|++... +...+. ..+.|
T Consensus 110 ~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~-~~~~L 188 (344)
T d2ca6a1 110 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQ-SHRLL 188 (344)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHH-HCTTC
T ss_pred ccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhh-hhhhh
Confidence 22233456677777777665421110 113456778888888776532 222222 36788
Q ss_pred CEEEccCccceee-----cCccccCCCCCcEEEcccCcCCCcCCccccccccCccCCCCCccccCceEEEEecceEeecc
Q 037651 500 SILRLRSNHFNGT-----IPSELCKLSALHILDLSHNNLSGPIPHCVGDFSAMKVKPPDTEIYQGSLQVAIKGTQYVYQQ 574 (750)
Q Consensus 500 ~~L~Ls~n~l~~~-----~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (750)
++|++++|++... +...+..+++|+.|++++|.++..-.
T Consensus 189 ~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~------------------------------------ 232 (344)
T d2ca6a1 189 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGS------------------------------------ 232 (344)
T ss_dssp CEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHH------------------------------------
T ss_pred cccccccccccccccccchhhhhcchhhhccccccccccccccc------------------------------------
Confidence 8888888877532 23456677888888888887753210
Q ss_pred cccccchhhhccccCCeEeccCCcCCCCcccc----cC--CCccCcEEEccCCccCcC----CCcccc-CCCCCCeEECc
Q 037651 575 TLYLMPVELTSLLHLGTLNLSGNQLVGKIPTQ----IG--KLEWLESLDLSRNKLSGS----IPPSMV-SIRFLSFLNLS 643 (750)
Q Consensus 575 ~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~----l~--~l~~L~~L~Ls~N~l~~~----~p~~l~-~l~~L~~l~ls 643 (750)
..+...+..+++|++|+|++|.+++..... +. ..+.|+.||+++|+++.. +...+. +.+.|++|+++
T Consensus 233 --~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~ 310 (344)
T d2ca6a1 233 --SALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELN 310 (344)
T ss_dssp --HHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECT
T ss_pred --ccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECC
Confidence 113345667788888888888887542222 22 236788999999988642 233332 46788999999
Q ss_pred CCccee
Q 037651 644 FNNLSG 649 (750)
Q Consensus 644 ~N~l~g 649 (750)
+|++..
T Consensus 311 ~N~~~~ 316 (344)
T d2ca6a1 311 GNRFSE 316 (344)
T ss_dssp TSBSCT
T ss_pred CCcCCC
Confidence 998754
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=4.5e-14 Score=127.20 Aligned_cols=129 Identities=21% Similarity=0.166 Sum_probs=88.8
Q ss_pred CCCCCCCcEEECCCCCCCCCccccccCCCCCCEEeCcCCCCcccCCcccCCCCCCCEEECcCCCCcccccccccCCCCCC
Q 037651 27 SLNFTSLQVLDLSNNGFNSTIPHWLFNITNLLSLDLNSNDLQGDIPDGFASLNSLQLLDLSGNSFLEGQLSRNLGTLCNL 106 (750)
Q Consensus 27 ~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L 106 (750)
+.+..++++|+|++|+|+.+ +..+..+++|++|+|++|+++.. +.|..+++|++|++++|+ +....+..+..+++|
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~-i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNR-ICRIGEGLDQALPDL 89 (162)
T ss_dssp EECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSC-CCEECSCHHHHCTTC
T ss_pred ccCcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCcc--CCcccCcchhhhhccccc-ccCCCcccccccccc
Confidence 44566778888888888654 55566778888888888887743 347778888888888887 443333345667888
Q ss_pred CEEeCcCcccccccc-hhhhccccccCCCCccEEEccCCcCcccCCc----cccCCCCCcEEEcc
Q 037651 107 QTLKLSLNQFRGEVS-DFIDGLSECINSSSLARLELGYNQLTGNLPI----SLGYLKNLRYLELW 166 (750)
Q Consensus 107 ~~L~Ls~n~l~~~~~-~~l~~l~~~~~~~~L~~L~L~~n~l~~~~~~----~l~~l~~L~~L~L~ 166 (750)
++|++++|+++.... ..+..++ +|++|++++|.++. .|. .+..+++|++||-.
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~------~L~~L~l~~N~i~~-~~~~r~~~i~~lp~L~~LD~~ 147 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLK------SLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQ 147 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCT------TCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTE
T ss_pred ccceecccccccccccccccccc------ccchhhcCCCcccc-ccchHHHHHHHCCCcCeeCCC
Confidence 888888888765422 3344444 88888888888763 332 46778888888743
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=7e-14 Score=125.93 Aligned_cols=124 Identities=16% Similarity=0.161 Sum_probs=53.8
Q ss_pred CCCCCeEECccCccccccCccccCCCCCCEEeCCCCccceeCCccccCCCCCCEEEccCCcCcCCCCccccCCCCCCEEe
Q 037651 399 LKQLLTLVISNNNLSGGIPQFLKNISSLYILDMTKNNFSGEIPESIGSLLTIRFLVLSNNHLSGEIPPSLKNCSLMDSLD 478 (750)
Q Consensus 399 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 478 (750)
+..+++|+|++|+|+. ++..+..+++|+.|++++|+++ .++ .+..+++|++|++++|+++...+..+..+++|+.|+
T Consensus 17 ~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 17 AVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp TTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccccce
Confidence 3344444444444442 2333344444444444444444 221 244444455555555544433333334444555555
Q ss_pred cCCCcccccCCh-hhhhcCCCCCEEEccCccceeecCc----cccCCCCCcEEE
Q 037651 479 LGENQLSGNIPA-WIGESMPSLSILRLRSNHFNGTIPS----ELCKLSALHILD 527 (750)
Q Consensus 479 L~~n~~~~~~p~-~~~~~l~~L~~L~Ls~n~l~~~~p~----~l~~l~~L~~L~ 527 (750)
+++|++. .+++ .....+++|+.|++++|++. ..|. .+..+++|++||
T Consensus 94 L~~N~i~-~~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 94 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred ecccccc-ccccccccccccccchhhcCCCccc-cccchHHHHHHHCCCcCeeC
Confidence 5555444 2322 11122455555555555544 2221 244455555554
No 30
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.46 E-value=2.8e-13 Score=115.78 Aligned_cols=103 Identities=28% Similarity=0.309 Sum_probs=59.9
Q ss_pred CEEecCCCCCCCCCCCCCCCCCCCCcEEECCCCCCCCCccccccCCCCCCEEeCcCCCCcccCCcccCCCCCCCEEECcC
Q 037651 9 VELHLPNSNLPILPIHFPSLNFTSLQVLDLSNNGFNSTIPHWLFNITNLLSLDLNSNDLQGDIPDGFASLNSLQLLDLSG 88 (750)
Q Consensus 9 ~~L~L~~~~l~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 88 (750)
|.|+|++|+++.++ .+..+++|++|++++|.+++ +|+.++.+++|++|++++|.+++ +| .+.++++|++|++++
T Consensus 1 R~L~Ls~n~l~~l~---~l~~l~~L~~L~ls~N~l~~-lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~ 74 (124)
T d1dcea3 1 RVLHLAHKDLTVLC---HLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 74 (124)
T ss_dssp SEEECTTSCCSSCC---CGGGGTTCCEEECCSSCCCC-CCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CEEEcCCCCCCCCc---ccccCCCCCEEECCCCccCc-chhhhhhhhcccccccccccccc-cC-ccccccccCeEECCC
Confidence 45666666666553 24556666666666666653 44456666666666666666663 23 366666666666666
Q ss_pred CCCcccccccccCCCCCCCEEeCcCcccc
Q 037651 89 NSFLEGQLSRNLGTLCNLQTLKLSLNQFR 117 (750)
Q Consensus 89 n~~~~~~~~~~l~~l~~L~~L~Ls~n~l~ 117 (750)
|++........+..+++|++|++++|.++
T Consensus 75 N~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 75 NRLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 66322222234555666666666666554
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.44 E-value=5.5e-13 Score=113.87 Aligned_cols=118 Identities=25% Similarity=0.385 Sum_probs=64.2
Q ss_pred EEecCCCcCcccCCcCCcCCCCCCeEECccCccccccCccccCCCCCCEEeCCCCccceeCCccccCCCCCCEEEccCCc
Q 037651 380 DLDISFNSLNGSIPQSVGNLKQLLTLVISNNNLSGGIPQFLKNISSLYILDMTKNNFSGEIPESIGSLLTIRFLVLSNNH 459 (750)
Q Consensus 380 ~L~ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 459 (750)
.|++++|+++. ++ .++.+++|++|++++|.++ .+|..+..+++|++|++++|+++ .+| .+..+++|++|++++|+
T Consensus 2 ~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCc
Confidence 45555555542 22 2455666666666666665 34555666666666666666665 233 35566666666666666
Q ss_pred CcCCC-CccccCCCCCCEEecCCCcccc--cCChhhhhcCCCCCEE
Q 037651 460 LSGEI-PPSLKNCSLMDSLDLGENQLSG--NIPAWIGESMPSLSIL 502 (750)
Q Consensus 460 l~~~~-~~~~~~l~~L~~L~L~~n~~~~--~~p~~~~~~l~~L~~L 502 (750)
++... ...+..+++|+.|++++|++.. ..+..+...+|+|+.|
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 65332 2345666666666666666642 1223333335555544
No 32
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.43 E-value=2.8e-14 Score=147.04 Aligned_cols=244 Identities=16% Similarity=0.112 Sum_probs=117.8
Q ss_pred CCCCCCcEEECCCCCCCCC----ccccccCCCCCCEEeCcCCCCccc----------CCcccCCCCCCCEEECcCCCCcc
Q 037651 28 LNFTSLQVLDLSNNGFNST----IPHWLFNITNLLSLDLNSNDLQGD----------IPDGFASLNSLQLLDLSGNSFLE 93 (750)
Q Consensus 28 ~~l~~L~~L~Ls~n~i~~~----~~~~~~~l~~L~~L~Ls~n~i~~~----------~~~~~~~l~~L~~L~Ls~n~~~~ 93 (750)
.+.++|+.|+|++|.+... +...+...++|+.|+++++..... +..++..+++|++|++++|. +.
T Consensus 28 ~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~-i~ 106 (344)
T d2ca6a1 28 LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA-FG 106 (344)
T ss_dssp HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC-CC
T ss_pred hhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccc-cc
Confidence 3455666666666655432 223344556666666665543211 11234455666666666665 22
Q ss_pred cc----cccccCCCCCCCEEeCcCcccccccchhhhc-cc------cccCCCCccEEEccCCcCccc----CCccccCCC
Q 037651 94 GQ----LSRNLGTLCNLQTLKLSLNQFRGEVSDFIDG-LS------ECINSSSLARLELGYNQLTGN----LPISLGYLK 158 (750)
Q Consensus 94 ~~----~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~-l~------~~~~~~~L~~L~L~~n~l~~~----~~~~l~~l~ 158 (750)
.. +...+...++|++|++++|.+.......++. +. .....+.|+.+++++|.+... +...+...+
T Consensus 107 ~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~ 186 (344)
T d2ca6a1 107 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR 186 (344)
T ss_dssp TTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT
T ss_pred cccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhh
Confidence 22 2223345566666666666554321111110 00 001223566666666665421 222344556
Q ss_pred CCcEEEccCCccccc-----CCccccCCCCCCeeecccccCCcc----cchhccCCCCCCEEEcccCcCccccCh---hh
Q 037651 159 NLRYLELWYNSFLGS-----IPPSIGNLTFLEELYLTSNQMNGK----FPESFGQLSAIRVLELSDNQWEGFITE---AH 226 (750)
Q Consensus 159 ~L~~L~L~~n~l~~~-----~p~~l~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~---~~ 226 (750)
.|+.|++++|.+... +...+..+++|++|++++|.++.. +...+..+++|++|++++|.+++.-.. ..
T Consensus 187 ~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~ 266 (344)
T d2ca6a1 187 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDA 266 (344)
T ss_dssp TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHH
T ss_pred hhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHH
Confidence 666666666665432 223345566666666666665432 223445566666666666666542111 01
Q ss_pred hc--CCCCCCEEecccCCCCCceEe-ccCCC-CCCCceeEEEeccccCCC
Q 037651 227 LR--NLTSLEELSLIKTSNSSLSFN-ISFDW-IPPFKLRYLVIRYYQLGP 272 (750)
Q Consensus 227 l~--~l~~L~~L~l~~~~~~~~~~~-~~~~~-~~~~~L~~L~l~~~~~~~ 272 (750)
+. ..+.|++|++++|........ ..... ...+.|+.|++++|.+..
T Consensus 267 l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 267 FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred hhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 22 234566666666443111000 00001 123467777777776643
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.31 E-value=6.3e-14 Score=130.97 Aligned_cols=130 Identities=23% Similarity=0.294 Sum_probs=72.6
Q ss_pred CCccccCCCCCCEEecCCCcccccCChhhhhcCCCCCEEEccCccceeecCccccCCCCCcEEEcccCcCCCcCCccccc
Q 037651 464 IPPSLKNCSLMDSLDLGENQLSGNIPAWIGESMPSLSILRLRSNHFNGTIPSELCKLSALHILDLSHNNLSGPIPHCVGD 543 (750)
Q Consensus 464 ~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~ 543 (750)
++..+..+++|++|+|++|+++ .++. +. .+++|+.|++++|+++ .+|.....+++|+.|++++|+++. +
T Consensus 40 l~~sl~~L~~L~~L~Ls~n~I~-~i~~-l~-~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l------ 108 (198)
T d1m9la_ 40 MDATLSTLKACKHLALSTNNIE-KISS-LS-GMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L------ 108 (198)
T ss_dssp CHHHHHHTTTCCEEECSEEEES-CCCC-HH-HHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H------
T ss_pred hhhHHhcccccceeECcccCCC-Cccc-cc-CCccccChhhcccccc-cccccccccccccccccccccccc-c------
Confidence 3445555666666666666665 4442 32 2566666666666665 444434444556666666666552 1
Q ss_pred cccCccCCCCCccccCceEEEEecceEeecccccccchhhhccccCCeEeccCCcCCCCcc-cccCCCccCcEEEccCCc
Q 037651 544 FSAMKVKPPDTEIYQGSLQVAIKGTQYVYQQTLYLMPVELTSLLHLGTLNLSGNQLVGKIP-TQIGKLEWLESLDLSRNK 622 (750)
Q Consensus 544 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~ 622 (750)
..+..+++|+.|++++|+++.... ..++.+++|+.|++++|+
T Consensus 109 -------------------------------------~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 109 -------------------------------------SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp -------------------------------------HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred -------------------------------------ccccccccccccccccchhccccccccccCCCccceeecCCCc
Confidence 124556666667777776653211 346666777777777776
Q ss_pred cCcCCCcc----------ccCCCCCCeEE
Q 037651 623 LSGSIPPS----------MVSIRFLSFLN 641 (750)
Q Consensus 623 l~~~~p~~----------l~~l~~L~~l~ 641 (750)
+....+.. +..+++|+.||
T Consensus 152 l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 152 LYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred cccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 65433322 34556666665
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.21 E-value=4.1e-13 Score=125.38 Aligned_cols=82 Identities=23% Similarity=0.266 Sum_probs=38.3
Q ss_pred CccEEEccCCcCcccCCccccCCCCCcEEEccCCcccccCCccccCCCCCCeeecccccCCcccc-hhccCCCCCCEEEc
Q 037651 135 SLARLELGYNQLTGNLPISLGYLKNLRYLELWYNSFLGSIPPSIGNLTFLEELYLTSNQMNGKFP-ESFGQLSAIRVLEL 213 (750)
Q Consensus 135 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~-~~l~~l~~L~~L~L 213 (750)
+|++|++++|.++ .+|.....+++|++|++++|+++.. ..+.++++|++|++++|+++.... ..+..+++|+.|++
T Consensus 71 ~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L 147 (198)
T d1m9la_ 71 NLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLL 147 (198)
T ss_dssp TCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEE
T ss_pred cccChhhcccccc-ccccccccccccccccccccccccc--ccccccccccccccccchhccccccccccCCCccceeec
Confidence 4444444444444 2333233333455555555554422 124445555555555555553211 23555555555555
Q ss_pred ccCcCc
Q 037651 214 SDNQWE 219 (750)
Q Consensus 214 ~~n~l~ 219 (750)
++|++.
T Consensus 148 ~~N~l~ 153 (198)
T d1m9la_ 148 AGNPLY 153 (198)
T ss_dssp CSSHHH
T ss_pred CCCccc
Confidence 555543
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=5.4e-11 Score=105.90 Aligned_cols=109 Identities=23% Similarity=0.105 Sum_probs=80.2
Q ss_pred CCCcCEEecCCCCCCCCCCCCCCCCCCCCcEEECCCC-CCCCCccccccCCCCCCEEeCcCCCCcccCCcccCCCCCCCE
Q 037651 5 LPSIVELHLPNSNLPILPIHFPSLNFTSLQVLDLSNN-GFNSTIPHWLFNITNLLSLDLNSNDLQGDIPDGFASLNSLQL 83 (750)
Q Consensus 5 l~~L~~L~L~~~~l~~~~~~~~~~~l~~L~~L~Ls~n-~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 83 (750)
+...+.++++++++...|. .+..+++|++|++++| .++.+.+++|.++++|+.|+|++|+++.+.+.+|.++++|++
T Consensus 7 c~~~~~l~c~~~~~~~~p~--~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 84 (156)
T d2ifga3 7 PHGSSGLRCTRDGALDSLH--HLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (156)
T ss_dssp CSSSSCEECCSSCCCTTTT--TSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred cCCCCeEEecCCCCccCcc--cccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccc
Confidence 4456678888888877765 4566788888888765 477666677888888888888888888777788888888888
Q ss_pred EECcCCCCcccccccccCCCCCCCEEeCcCcccc
Q 037651 84 LDLSGNSFLEGQLSRNLGTLCNLQTLKLSLNQFR 117 (750)
Q Consensus 84 L~Ls~n~~~~~~~~~~l~~l~~L~~L~Ls~n~l~ 117 (750)
|+|++|++ +. +|.......+|++|++++|.+.
T Consensus 85 L~Ls~N~l-~~-l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 85 LNLSFNAL-ES-LSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp EECCSSCC-SC-CCSTTTCSCCCCEEECCSSCCC
T ss_pred eeccCCCC-cc-cChhhhccccccccccCCCccc
Confidence 88888884 32 4444333446888888888774
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.16 E-value=6.8e-11 Score=105.22 Aligned_cols=84 Identities=21% Similarity=0.169 Sum_probs=39.0
Q ss_pred CcEEECCCCCCCCCccccccCCCCCCEEeCcCC-CCcccCCcccCCCCCCCEEECcCCCCcccccccccCCCCCCCEEeC
Q 037651 33 LQVLDLSNNGFNSTIPHWLFNITNLLSLDLNSN-DLQGDIPDGFASLNSLQLLDLSGNSFLEGQLSRNLGTLCNLQTLKL 111 (750)
Q Consensus 33 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n-~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~~L~L 111 (750)
.+.++.+++.+.. .|..+..+++|++|++++| .++.+.+.+|.++++|++|++++|+ ++...+.+|..+++|++|+|
T Consensus 10 ~~~l~c~~~~~~~-~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~-l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 10 SSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG-LRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSCEECCSSCCCT-TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSC-CCEECTTGGGSCSCCCEEEC
T ss_pred CCeEEecCCCCcc-CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccc-cCCcccccccccccccceec
Confidence 3445555555442 3334445555555555433 2444444445555555555555554 33333344444444444444
Q ss_pred cCccccc
Q 037651 112 SLNQFRG 118 (750)
Q Consensus 112 s~n~l~~ 118 (750)
++|+++.
T Consensus 88 s~N~l~~ 94 (156)
T d2ifga3 88 SFNALES 94 (156)
T ss_dssp CSSCCSC
T ss_pred cCCCCcc
Confidence 4444443
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.36 E-value=1.9e-08 Score=89.76 Aligned_cols=59 Identities=31% Similarity=0.193 Sum_probs=30.8
Q ss_pred hhccccCCeEeccCCcCCCCcccccCCCccCcEEEccCCccCcCCCcc-------ccCCCCCCeEE
Q 037651 583 LTSLLHLGTLNLSGNQLVGKIPTQIGKLEWLESLDLSRNKLSGSIPPS-------MVSIRFLSFLN 641 (750)
Q Consensus 583 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-------l~~l~~L~~l~ 641 (750)
+..+++|+.|+|++|.++...+-.+.....|+.|++++|++.+..... +..+++|+.||
T Consensus 87 ~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 87 VQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred HhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 455566666666666665322212223345666666666665443321 34556666665
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.35 E-value=1.8e-08 Score=89.92 Aligned_cols=80 Identities=23% Similarity=0.157 Sum_probs=35.5
Q ss_pred CCCCCEEEccCCcCcCCC--CccccCCCCCCEEecCCCcccccCChhhhhcCCCCCEEEccCccceeecCc-------cc
Q 037651 447 LLTIRFLVLSNNHLSGEI--PPSLKNCSLMDSLDLGENQLSGNIPAWIGESMPSLSILRLRSNHFNGTIPS-------EL 517 (750)
Q Consensus 447 l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~l~~L~~L~Ls~n~l~~~~p~-------~l 517 (750)
++.|++|++++|+++... +..+..+++|+.|++++|+++ .+++...-....|+.|++++|++.+.... .+
T Consensus 64 ~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~ 142 (162)
T d1koha1 64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIR 142 (162)
T ss_dssp CTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHH
T ss_pred CCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc-cchhhhhhhccccceeecCCCCcCcCcccchhHHHHHH
Confidence 444444444444444221 223344555555555555554 33332211233455555555555433221 13
Q ss_pred cCCCCCcEEE
Q 037651 518 CKLSALHILD 527 (750)
Q Consensus 518 ~~l~~L~~L~ 527 (750)
..+++|+.||
T Consensus 143 ~~~P~L~~LD 152 (162)
T d1koha1 143 ERFPKLLRLD 152 (162)
T ss_dssp TTSTTCCEET
T ss_pred HHCCCCCEEC
Confidence 4456666554
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.64 E-value=2.6e-05 Score=69.12 Aligned_cols=18 Identities=6% Similarity=0.067 Sum_probs=8.4
Q ss_pred cCCCCCCCEEeCcCcccc
Q 037651 100 LGTLCNLQTLKLSLNQFR 117 (750)
Q Consensus 100 l~~l~~L~~L~Ls~n~l~ 117 (750)
+...++|++|++++|.+.
T Consensus 40 L~~n~~L~~L~Ls~n~l~ 57 (167)
T d1pgva_ 40 ACNSKHIEKFSLANTAIS 57 (167)
T ss_dssp HTTCSCCCEEECTTSCCB
T ss_pred HhhCCccceeeccccccc
Confidence 334444555555544443
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.63 E-value=1e-05 Score=71.74 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=16.4
Q ss_pred CCCCEEEccCCcCcCC----CCccccCCCCCCEEecCCCcc
Q 037651 448 LTIRFLVLSNNHLSGE----IPPSLKNCSLMDSLDLGENQL 484 (750)
Q Consensus 448 ~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~~ 484 (750)
+.|+.|++++|.++.. +-.++...++|++|++++|.+
T Consensus 72 ~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~ 112 (167)
T d1pgva_ 72 PSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQ 112 (167)
T ss_dssp SSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSS
T ss_pred ccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcC
Confidence 4444444444444321 112344445555555555543
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.88 E-value=0.00024 Score=62.58 Aligned_cols=19 Identities=11% Similarity=0.055 Sum_probs=10.1
Q ss_pred cCCCCCCCEEeCcCccccc
Q 037651 100 LGTLCNLQTLKLSLNQFRG 118 (750)
Q Consensus 100 l~~l~~L~~L~Ls~n~l~~ 118 (750)
+...++|++|++++|.+..
T Consensus 42 l~~n~~L~~L~Ls~n~l~~ 60 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTRSND 60 (166)
T ss_dssp HTTCCSCCEEECTTSCCCH
T ss_pred HhcCCccCeeeccCCcccH
Confidence 3445555555555555543
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.87 E-value=0.00027 Score=62.23 Aligned_cols=17 Identities=12% Similarity=0.065 Sum_probs=9.7
Q ss_pred cccCCCCCcEEEccCCc
Q 037651 153 SLGYLKNLRYLELWYNS 169 (750)
Q Consensus 153 ~l~~l~~L~~L~L~~n~ 169 (750)
.+...++|+.|+++.+.
T Consensus 127 ~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 127 MLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHHCSSCCEEECCCSS
T ss_pred HHHhCCCcCEEeCcCCC
Confidence 34455666666665543
Done!