BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037652
(316 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WQF7|OPD21_ARATH Dihydrolipoyllysine-residue acetyltransferase component 1 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=LTA3 PE=1 SV=2
Length = 637
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/310 (63%), Positives = 242/310 (78%), Gaps = 21/310 (6%)
Query: 27 QKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKT 86
+K FTKISP+AKLLI EHGL+ASS++ASGPYGTLLK DV+AAI S +S+SS+ T+K
Sbjct: 324 RKAGFTKISPAAKLLILEHGLEASSIEASGPYGTLLKSDVVAAIAS-GKASKSSASTKKK 382
Query: 87 SPSFHPQTSPAVSQGSNLELSD-SFEDLPNTQIRKAIARRLLELKQTAPHLYLSS----- 140
PS + + + ++ SD ++ED PN+QIRK IA+RLLE KQ PHLYL S
Sbjct: 383 QPSKETPSKSSSTSKPSVTQSDNNYEDFPNSQIRKIIAKRLLESKQKIPHLYLQSDVVLD 442
Query: 141 ----------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAV 190
+ H +KVSVNDIVIKAVAVAL+NV +AN++W+ E +IV+ D++DISIAV
Sbjct: 443 PLLAFRKELQENHGVKVSVNDIVIKAVAVALRNVRQANAFWDAEKGDIVMCDSVDISIAV 502
Query: 191 ATEKGLMTPIVRNADQKSISAISMEVKELAE--RAGKLAPHEFQGGTFSISNLGMFPVDQ 248
ATEKGLMTPI++NADQKSISAIS+EVKELA+ R+GKLAPHEFQGGTFSISNLGM+PVD
Sbjct: 503 ATEKGLMTPIIKNADQKSISAISLEVKELAQKARSGKLAPHEFQGGTFSISNLGMYPVDN 562
Query: 249 FCAIINTPLAGILVVGRGNQVVELVIGRN--EIPAVVTKMNLTLSADHRVFEGKVGCAFF 306
FCAIIN P AGIL VGRGN+VVE VIG + E P+VVTKMN+TLSADHR+F+G+VG +F
Sbjct: 563 FCAIINPPQAGILAVGRGNKVVEPVIGLDGIEKPSVVTKMNVTLSADHRIFDGQVGASFM 622
Query: 307 SALCSNFRDI 316
S L SNF D+
Sbjct: 623 SELRSNFEDV 632
>sp|O00330|ODPX_HUMAN Pyruvate dehydrogenase protein X component, mitochondrial OS=Homo
sapiens GN=PDHX PE=1 SV=3
Length = 501
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 173/316 (54%), Gaps = 35/316 (11%)
Query: 33 KISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEK------- 85
++SP+A+ ++ +H LDAS A+GP G K D L ++ ++ + S
Sbjct: 183 RLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVQLKQTGKITESRPTPAPTATPT 242
Query: 86 --------TSPSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLY 137
PS+ P VS +F ++P + IR+ IA+RL E K T PH Y
Sbjct: 243 APSPLQATAGPSYPRPVIPPVSTPGQPNAVGTFTEIPASNIRRVIAKRLTESKSTVPHAY 302
Query: 138 LSSK--------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDA 183
++ K +IKVSVND +IKA AV LK +P+ N W+ E + + F
Sbjct: 303 ATADCDLGAVLKVRQDLVKDDIKVSVNDFIIKAAAVTLKQMPDVNVSWDGEGPKQLPF-- 360
Query: 184 IDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNL 241
IDIS+AVAT+KGL+TPI+++A K I I+ VK L+++A GKL P E+QGG+FSISNL
Sbjct: 361 IDISVAVATDKGLLTPIIKDAAAKGIQEIADSVKALSKKARDGKLLPEEYQGGSFSISNL 420
Query: 242 GMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTK--MNLTLSADHRVFEG 299
GMF +D+F A+IN P A IL VGR V++L + + + +T+S+D RV +
Sbjct: 421 GMFGIDEFTAVINPPQACILAVGRFRPVLKLTEDEEGNAKLQQRQLITVTMSSDSRVVDD 480
Query: 300 KVGCAFFSALCSNFRD 315
++ F + +N +
Sbjct: 481 ELATRFLKSFKANLEN 496
>sp|Q1RJT3|ODP2_RICBR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia bellii (strain
RML369-C) GN=pdhC PE=3 SV=1
Length = 418
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 165/296 (55%), Gaps = 48/296 (16%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQT 94
SP AK L + ++ SGP+G ++K DVL S K S++ S+ S +P+
Sbjct: 135 SPLAKRLAKIQNVRIEEIKGSGPHGRIIKQDVL----SHKGGSKALSNK---IVSRNPE- 186
Query: 95 SPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS--------------- 139
+ PN IRK IA+RLLE KQT PH YLS
Sbjct: 187 --------------EYRLAPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDIREDI 232
Query: 140 ----SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKG 195
+ K+SVND +I AVA AL+ VP AN+ W + I ++ +DIS+AVA E G
Sbjct: 233 NKSFGDDKSAKISVNDFIILAVAKALQEVPNANASWG--DDAIRYYNNVDISVAVAIENG 290
Query: 196 LMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAII 253
L+TPI+RNADQK+I +S E+K L ++A KL P EFQGG F+ISNLGM+ + F AII
Sbjct: 291 LVTPIIRNADQKNIVDLSSEMKGLIKKARENKLTPEEFQGGGFTISNLGMYGIKNFNAII 350
Query: 254 NTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSAL 309
N P + I+ VG ++ I +N+ ++ T M++TLSADHRV +G VG F +A
Sbjct: 351 NPPQSCIMGVGSSSK---RAIVKNDQISIATIMDVTLSADHRVVDGAVGAEFLAAF 403
>sp|Q8BKZ9|ODPX_MOUSE Pyruvate dehydrogenase protein X component, mitochondrial OS=Mus
musculus GN=Pdhx PE=2 SV=1
Length = 501
Score = 187 bits (475), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 115/316 (36%), Positives = 173/316 (54%), Gaps = 35/316 (11%)
Query: 33 KISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSP---- 88
++SP+A+ ++ +H LDAS A+GP G K D L ++ ++ + S P
Sbjct: 183 RLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVELKQMGKITESRPASAPPPSLS 242
Query: 89 -SFHPQTS----------PAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLY 137
S PQ + P VS + +F ++P + IR+ IA+RL E K T PH Y
Sbjct: 243 ASVPPQATAGPSYPRPMTPPVSIPGQPNAAGTFTEIPASNIRRVIAKRLTESKSTVPHAY 302
Query: 138 LSSK--------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDA 183
++ K +IKVSVND +I+A AV LK +P N W+ E + +
Sbjct: 303 ATADCDLGAVLKVRRDLVKDDIKVSVNDFIIRAAAVTLKQMPGVNVTWDGEGPK--QLPS 360
Query: 184 IDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNL 241
+DIS+AVAT+KGL+TPI+++A K I I+ VK L+++A GKL P E+QGG+FSISNL
Sbjct: 361 VDISVAVATDKGLITPIIKDAAAKGIQEIADSVKVLSKKARDGKLMPEEYQGGSFSISNL 420
Query: 242 GMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTK--MNLTLSADHRVFEG 299
GMF +D+F A+IN P A IL VGR V++L P + + +T+S+D RV +
Sbjct: 421 GMFGIDEFAAVINPPQACILAVGRFRPVLKLTEDEEGNPQLQQHQLITVTMSSDSRVVDD 480
Query: 300 KVGCAFFSALCSNFRD 315
++ F +N +
Sbjct: 481 ELATRFLETFKANLEN 496
>sp|Q92HK7|ODP2_RICCN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=pdhC PE=3 SV=1
Length = 412
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 162/296 (54%), Gaps = 50/296 (16%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQT 94
SP AK L + S++ SGP+G ++K D+L S+ P T
Sbjct: 134 SPLAKRLAKMRNIRFESVKGSGPHGRIVKQDIL---------------------SYTPST 172
Query: 95 SPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS--------------- 139
+ N E + +PN IRK IA+RLLE KQT PH YLS
Sbjct: 173 AHNKIVSRNPE---EYRLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDIREDI 229
Query: 140 ----SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKG 195
S+ + ++SVND +I AVA AL+ VP AN+ W + I ++ +DIS+AVA E G
Sbjct: 230 NKFFSEDKSTRISVNDFIILAVAKALQEVPNANASWG--EDAIRYYNNVDISVAVAIENG 287
Query: 196 LMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAII 253
L+TPIV+NA+QK+I +S E+K L ++A KL P EFQGG F+ISNLGM+ + F AII
Sbjct: 288 LVTPIVKNANQKNILELSREMKALIKKAKDNKLTPEEFQGGGFTISNLGMYGIKNFNAII 347
Query: 254 NTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSAL 309
N P + I+ VG + I +N+ + T M++TLSADHRV +G VG F A
Sbjct: 348 NPPQSCIMGVGAS---AKRAIVKNDQITIATIMDVTLSADHRVVDGAVGAEFLVAF 400
>sp|Q4ULG1|ODP2_RICFE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=pdhC PE=3 SV=1
Length = 412
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 165/298 (55%), Gaps = 54/298 (18%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQT 94
SP AK L + S++ SGP+G ++K D+L S+ P T
Sbjct: 134 SPLAKRLAKMGNIRLESVKGSGPHGRIVKQDIL---------------------SYTPST 172
Query: 95 --SPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS------------- 139
+ VS+ + + +PN IRK IA+RLLE KQT PH YLS
Sbjct: 173 VHNKIVSRNP-----EEYRLVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDIRE 227
Query: 140 ------SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATE 193
S+ + ++SVND +I AVA AL+ +P AN+ W + I + +DIS+AVA E
Sbjct: 228 DINKSFSEDKSTRISVNDFIILAVAKALQELPNANASWG--EDAIRYHNNVDISVAVAIE 285
Query: 194 KGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCA 251
GL+TPIV+NA+QK+I +S E+KEL ++A KL P EFQGG F+ISNLGM+ + F A
Sbjct: 286 NGLVTPIVKNANQKNIIELSREMKELIKKAKDNKLTPEEFQGGGFTISNLGMYGIKNFNA 345
Query: 252 IINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSAL 309
IIN P + I+ VG + I +N+ + T M++TLSADHRV +G VG F +A
Sbjct: 346 IINPPQSCIMGVGAS---AKRAIVKNDQVTIATIMDVTLSADHRVVDGAVGAEFLAAF 400
>sp|Q9R9N3|ODP2_RHIME Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rhizobium meliloti (strain
1021) GN=pdhC PE=3 SV=1
Length = 447
Score = 185 bits (469), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 173/308 (56%), Gaps = 37/308 (12%)
Query: 28 KRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTS 87
KR F+ SP A+ L E G+D S++ SGP+G ++K DV A+ A +
Sbjct: 139 KRIFS--SPLARRLAKEAGIDLSAIAGSGPHGRVVKKDVETAVSGGAAKPAGAPAAAPAP 196
Query: 88 PSFHPQTSPAVSQGSNLELSD--SFEDLPNTQIRKAIARRLLELKQTAPHLYLS------ 139
+ + +S+ + L+L + S+E +P+ +RK IA+RL+E KQT PH Y+S
Sbjct: 197 ATL----AKGMSEDAVLKLFEPGSYELVPHDGMRKTIAKRLVESKQTIPHFYVSVDCELD 252
Query: 140 ----------------SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDA 183
K K+SVND+VIKA+A+AL++VP+AN W + +V
Sbjct: 253 ALMALRAQLNAAAPEKDGKPVYKLSVNDMVIKALALALRDVPDANVSWT--DQNMVKHKH 310
Query: 184 IDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAERAG--KLAPHEFQGGTFSISNL 241
D+ +AV+ GL+TPIVR A+ KS+SAIS E+K+L +RA KL P E+QGGT ++SN+
Sbjct: 311 ADVGVAVSIPGGLITPIVRQAELKSLSAISNEMKDLGKRAKERKLKPEEYQGGTTAVSNM 370
Query: 242 GMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKV 301
GM V F A++N P A IL VG G + V+ RN+ + M +TLS DHR +G +
Sbjct: 371 GMMGVKDFAAVVNPPHATILAVGAGE---DRVVVRNKEMVIANVMTVTLSTDHRCVDGAL 427
Query: 302 GCAFFSAL 309
G +A
Sbjct: 428 GAELLAAF 435
>sp|Q68WK6|ODP2_RICTY Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=pdhC PE=3 SV=1
Length = 404
Score = 184 bits (467), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 171/315 (54%), Gaps = 56/315 (17%)
Query: 18 NSSSHDAKVQKRSFTKI--SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKA 75
N S + +V K +KI SP AK L + S+Q SGP+G ++K D+L
Sbjct: 111 NESITNVEVVKHDLSKIFASPLAKRLAKIRNIRLESVQGSGPHGRIVKQDIL-------- 162
Query: 76 SSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPH 135
S+ P T+ ++ + +PN IR+ IA+RLLE KQT PH
Sbjct: 163 -------------SYSPSTAYNRD-------TEEYRSVPNNNIRQIIAKRLLESKQTVPH 202
Query: 136 LYLS-------------------SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETE 176
YLS S+ K+SVND +I AVA AL+ VP AN+ W +
Sbjct: 203 FYLSIECNVDKLLDIREDINKSFSEDKLTKISVNDFIILAVAKALQEVPNANASW--AED 260
Query: 177 EIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGG 234
I ++ +DIS+AVA E G++TPI+++A++K+I +S E+K L ++A KL P EFQGG
Sbjct: 261 AIRYYNNVDISVAVAIENGIVTPIIKDANKKNIIELSHEMKILIKKAKDNKLTPVEFQGG 320
Query: 235 TFSISNLGMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADH 294
F+ISNLGM+ + F AIINTP + I+ VG + I +N+ + T M++TLSADH
Sbjct: 321 GFTISNLGMYGIKNFNAIINTPQSCIMGVGASTK---RAIVKNDQIIIATIMDVTLSADH 377
Query: 295 RVFEGKVGCAFFSAL 309
RV +G V F ++
Sbjct: 378 RVIDGAVSAEFLASF 392
>sp|Q86AD5|Y1564_DICDI Pyruvate dehydrogenase complex subunit homolog DDB_G0271564,
mitochondrial OS=Dictyostelium discoideum GN=pdhX PE=3
SV=1
Length = 413
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 160/273 (58%), Gaps = 38/273 (13%)
Query: 36 PSAKLLIPEHGLDAS-SLQASGPYGTLLKGDVLAAIKSEKAS-----------------S 77
PS + L+ E+G+++S + A+GP LLKGDVLA IK++ S S
Sbjct: 32 PSVRRLLVEYGINSSKEVTATGPQNRLLKGDVLAYIKTKNLSPVDRLSLIASSVKSSQPS 91
Query: 78 RSSSHTEKTSPSFHPQTSPAVSQGSNLELSDS-----FEDLPNTQIRKAIARRLLELKQT 132
SSS + SP+ Q + + + + +ED+PN IR+ IA +L + KQ
Sbjct: 92 SSSSPSIVDSPTLTSQIKDQIKIVTTITNDKNKSKVIYEDIPNNNIRRVIATKLSQSKQQ 151
Query: 133 APHLYLS-------------SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIV 179
PH Y++ S N+K+SVND V++A A+AL++ P+ANS W+ E E +
Sbjct: 152 VPHFYMTVECELDNVLAMRKSMPENVKISVNDFVLRACALALRDNPQANSKWSDEHGEAI 211
Query: 180 LFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTFS 237
L +DIS AV+T++GL+TPI+ N D+K + AIS E K+LA R GKL P EF GGTFS
Sbjct: 212 LNPTVDISFAVSTDRGLITPIITNTDKKQLLAISNESKQLALKARDGKLKPEEFIGGTFS 271
Query: 238 ISNLGMFPVDQFCAIINTPLAGILVVGRGNQVV 270
+SNLGMF + F AIIN P AGIL +G G +V+
Sbjct: 272 VSNLGMFGITSFNAIINYPQAGILAIGTGRKVL 304
>sp|Q9ZD20|ODP2_RICPR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Rickettsia prowazekii (strain
Madrid E) GN=pdhC PE=3 SV=1
Length = 408
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 163/296 (55%), Gaps = 50/296 (16%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQT 94
SP AK L + ++Q SGP+G ++K D+L+ S ++ TE+
Sbjct: 130 SPLAKRLAKIGDIRLENVQGSGPHGRIVKQDILSYDSSTSSNKIVYRDTEE--------- 180
Query: 95 SPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS--------------- 139
+ +PN IRK IA+RLLE KQT PH YLS
Sbjct: 181 ---------------YRSVPNNNIRKIIAKRLLESKQTVPHFYLSIECNVDKLLDVREDI 225
Query: 140 ----SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKG 195
S+ K+SVND +I AVA AL+ VP AN+ W+ + I ++ +DIS+AVA E G
Sbjct: 226 NKSFSEDKVTKISVNDFIILAVAKALQEVPNANASWS--EDAIRYYNNVDISVAVAIENG 283
Query: 196 LMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAII 253
++TPIV++A++K+I +S E+K L ++A KL P EFQGG F+ISNLGM+ + F AII
Sbjct: 284 IVTPIVKDANKKNIIELSREMKTLIKKAKDNKLTPIEFQGGGFTISNLGMYGIKNFNAII 343
Query: 254 NTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSAL 309
NTP + I+ VG + I +N+ + T M++TLSADHRV +G V F ++
Sbjct: 344 NTPQSCIMGVGASTK---RAIVKNDQIIIATIMDVTLSADHRVIDGAVSAEFLASF 396
>sp|P22439|ODPX_BOVIN Pyruvate dehydrogenase protein X component OS=Bos taurus GN=PDHX
PE=1 SV=3
Length = 501
Score = 181 bits (460), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/347 (33%), Positives = 181/347 (52%), Gaps = 39/347 (11%)
Query: 2 PLISPSHTVHSLSPPFNSSSHDAKVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTL 61
P + P ++ P KVQ R +SP+A+ ++ +H LDA+ A+GP G
Sbjct: 156 PSVPPPSAEPQIATPVKKEHPPGKVQFR----LSPAARNILEKHALDANQGTATGPRGIF 211
Query: 62 LKGDVLAAIKSEKASSRSSSHTEKTSP---------------SFHPQTSPAVSQGSNLEL 106
K D L ++ ++ + P S+ P VS +
Sbjct: 212 TKEDALKLVQLKQTGKITEPRPTAALPTTPAAPLPPQAAATASYPRPMIPPVSTPGQPNV 271
Query: 107 SDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK--------------KHNIKVSVNDI 152
+F ++P + IR+ IA+RL E K T PH Y ++ + +IKVSVND
Sbjct: 272 EGTFTEIPASNIRRVIAKRLTESKSTIPHAYATTDCDLGAVLTARQNLVRDDIKVSVNDF 331
Query: 153 VIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAI 212
+IKA AV LK +P N+ W+ E + +IDIS+AVAT++GL+TP++++A K + I
Sbjct: 332 IIKAAAVTLKQMPNVNASWDGEGAK--QLPSIDISVAVATDRGLITPVIKDAAAKGLQEI 389
Query: 213 SMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAIINTPLAGILVVGRGNQVV 270
+ VK L+++A GKL P E+QGG+FSISNLGMF +D+F A+IN P A IL VGR V+
Sbjct: 390 ADSVKALSKKARDGKLLPEEYQGGSFSISNLGMFGIDEFTAVINPPQACILAVGRFRPVL 449
Query: 271 ELVIGRNEIPAVVTK--MNLTLSADHRVFEGKVGCAFFSALCSNFRD 315
+L + + + +T+S+D RV + ++ F + +N +
Sbjct: 450 KLTQDEEGNAQLQQRQLITVTMSSDSRVVDDELATRFLESFKANLEN 496
>sp|O66119|ODP2_ZYMMO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=pdhC PE=3
SV=2
Length = 440
Score = 181 bits (459), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 174/307 (56%), Gaps = 46/307 (14%)
Query: 27 QKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAI-KSEKASSRSSSHTEK 85
+K K SP AK L ++ +D + SGP+G ++K D+ A I ++ +ASS S T
Sbjct: 143 EKAGRIKASPLAKRLAKKNHVDLKQVNGSGPHGRIIKADIEAFIAEANQASSNPSVST-- 200
Query: 86 TSPSFHPQTSPAVSQGS---NLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYL---- 138
P+ S ++ + +++LS+ +R+ IARRL E KQ PH+YL
Sbjct: 201 ------PEASGKITHDTPHNSIKLSN---------MRRVIARRLTESKQNIPHIYLTVDV 245
Query: 139 --------------SSKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAI 184
S NIK+SVND++IKA A+ALK P N ++ ++++ F
Sbjct: 246 QMDALLKLRSELNESLAVQNIKISVNDMLIKAQALALKATPNVNVAFD--GDQMLQFSQA 303
Query: 185 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLG 242
DIS+AV+ E GL+TPI++ AD KS+SA+S+E+KEL RA G+L P E+QGGT SISN+G
Sbjct: 304 DISVAVSVEGGLITPILKQADTKSLSALSVEMKELIARAREGRLQPQEYQGGTSSISNMG 363
Query: 243 MFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVG 302
MF + QF A+IN P A IL +G G + ++ ++ + T +T S DHRV +G
Sbjct: 364 MFGIKQFNAVINPPQASILAIGSGERRPWVI---DDAITIATVATITGSFDHRVIDGADA 420
Query: 303 CAFFSAL 309
AF SA
Sbjct: 421 AAFMSAF 427
>sp|P10515|ODP2_HUMAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Homo sapiens
GN=DLAT PE=1 SV=3
Length = 647
Score = 178 bits (452), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/295 (40%), Positives = 166/295 (56%), Gaps = 39/295 (13%)
Query: 34 ISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQ 93
+SP AK L E G+D + ++ +GP G + K D+ + + S K + ++ T P P
Sbjct: 357 VSPLAKKLAVEKGIDLTQVKGTGPDGRITKKDIDSFVPS-KVAPAPAAVVPPTGPGMAP- 414
Query: 94 TSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS-----------SKK 142
V G F D+P + IR+ IA+RL++ KQT PH YLS K+
Sbjct: 415 ----VPTGV-------FTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKE 463
Query: 143 HNI------KVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFD-AIDISIAVATEKG 195
N K+SVND +IKA A+A VPEANS W + ++ + +D+S+AV+T G
Sbjct: 464 LNKILEGRSKISVNDFIIKASALACLKVPEANSSW---MDTVIRQNHVVDVSVAVSTPAG 520
Query: 196 LMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAII 253
L+TPIV NA K + I+ +V LA +A GKL PHEFQGGTF+ISNLGMF + F AII
Sbjct: 521 LITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAII 580
Query: 254 NTPLAGILVVGRGNQVVELVIGRNEIP-AVVTKMNLTLSADHRVFEGKVGCAFFS 307
N P A IL +G +LV NE V + M++TLS DHRV +G VG + +
Sbjct: 581 NPPQACILAIGASED--KLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLA 633
>sp|Q8RWN9|OPD22_ARATH Dihydrolipoyllysine-residue acetyltransferase component 2 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At3g13930 PE=1 SV=2
Length = 539
Score = 176 bits (447), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 163/299 (54%), Gaps = 45/299 (15%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDV--LAAIKSEKASSRSSSHTEKTSPSFHP 92
SP A+ L ++ + SS++ +GP G ++K DV A S++ +++ S + P+
Sbjct: 250 SPLARKLAEDNNVPLSSIKGTGPEGRIVKADVEDFLASGSKETTAKPSKQVDSKVPAL-- 307
Query: 93 QTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS------------- 139
+ D+P+TQIRK A RL KQT PH YL+
Sbjct: 308 ----------------DYVDIPHTQIRKVTASRLAFSKQTIPHYYLTVDTCVDKMMGLRS 351
Query: 140 ------SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATE 193
++SVND+VIKA A+AL+ VP+ NS W E I F ++I++AV TE
Sbjct: 352 QLNSFQEASGGKRISVNDLVIKAAALALRKVPQCNSSWT--DEYIRQFKNVNINVAVQTE 409
Query: 194 KGLMTPIVRNADQKSISAISMEVKELAERAGK--LAPHEFQGGTFSISNLGM-FPVDQFC 250
GL P+V++AD+K +S I EV+ LA++A + L P +++GGTF++SNLG F + QFC
Sbjct: 410 NGLYVPVVKDADKKGLSTIGEEVRFLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFC 469
Query: 251 AIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSAL 309
A+IN P A IL +G + V G ++ V + M++TLS DHRV +G +G + A
Sbjct: 470 AVINPPQAAILAIGSAEKRVVPGTGPDQY-NVASYMSVTLSCDHRVIDGAIGAEWLKAF 527
>sp|P36413|ODP2_DICDI Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Dictyostelium
discoideum GN=pdhC PE=1 SV=2
Length = 635
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 159/300 (53%), Gaps = 37/300 (12%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAI--KSEKASSRSSSHTEKTSPSFHP 92
+P+A+ G D S++ +GP +LK DVL + K E A + T T P
Sbjct: 344 TPAARFEASSKGYDLSAINGTGPNNRILKADVLEFVPQKQEVAQQQQQQTTTTTKKPTTP 403
Query: 93 QTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS------------- 139
+S F D+P++ IRK A RL E KQT PH YL+
Sbjct: 404 TSS------------GEFTDIPHSNIRKVTAARLTESKQTIPHYYLTMECRVDKLLKLRS 451
Query: 140 --SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLM 197
+ + +K+SVND ++KA A AL++ P NS W + I + IDI++AV T +GL
Sbjct: 452 ELNAMNTVKISVNDFIVKASAAALRDNPVVNSTWT--DQFIRRYHNIDINVAVNTPQGLF 509
Query: 198 TPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAIINT 255
TPIVR D K +++IS VK+LAE+A GKL P EF+ GTF+ISNLGM + QF A+IN
Sbjct: 510 TPIVRGVDMKGLNSISTSVKQLAEKAQNGKLHPSEFESGTFTISNLGMLGIKQFAAVINP 569
Query: 256 PLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRD 315
P A IL VG V L + T +++TLS DHRV +G VG + + F+D
Sbjct: 570 PQAAILAVGTTETRVVLSNKPDSPYETATILSVTLSCDHRVIDGAVGAEWLKS----FKD 625
>sp|Q8BMF4|ODP2_MOUSE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Mus musculus
GN=Dlat PE=1 SV=2
Length = 642
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 175/309 (56%), Gaps = 41/309 (13%)
Query: 20 SSHDAKVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRS 79
S+ A + R F +SP AK L E G+D + ++ +GP G ++K D+ + + S+ A + +
Sbjct: 340 SAAPAGPKGRVF--VSPLAKKLAAEKGIDLTQVKGTGPEGRIIKKDIDSFVPSKAAPAAA 397
Query: 80 SSHTEKTSPSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS 139
++ + +PA + F D+P + IR+ IA+RL++ KQT PH YLS
Sbjct: 398 AAMAPPGP-----RVAPAPA--------GVFTDIPISNIRRVIAQRLMQSKQTIPHYYLS 444
Query: 140 -----------SKKHNI------KVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFD 182
K+ N K+SVND +IKA A+A VPEANS W + ++ +
Sbjct: 445 VDVNMGEVLLVRKELNKMLEGKGKISVNDFIIKASALACLKVPEANSSW---MDTVIRQN 501
Query: 183 -AIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSIS 239
+D+S+AV+T GL+TPIV NA K + I+ +V LA +A GKL PHEFQGGTF+IS
Sbjct: 502 HVVDVSVAVSTPAGLITPIVFNAHIKGLETIASDVVSLASKAREGKLQPHEFQGGTFTIS 561
Query: 240 NLGMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIP-AVVTKMNLTLSADHRVFE 298
NLGMF + F AIIN P A IL +G +L+ NE V + M++TLS DHRV +
Sbjct: 562 NLGMFGIKNFSAIINPPQACILAIGASED--KLIPADNEKGFDVASVMSVTLSCDHRVVD 619
Query: 299 GKVGCAFFS 307
G VG + +
Sbjct: 620 GAVGAQWLA 628
>sp|P08461|ODP2_RAT Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Rattus
norvegicus GN=Dlat PE=1 SV=3
Length = 632
Score = 174 bits (441), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 167/295 (56%), Gaps = 40/295 (13%)
Query: 34 ISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQ 93
+SP AK L E G+D + ++ +GP G ++K D+ + + ++ A + +++ + P
Sbjct: 343 VSPLAKKLAAEKGIDLTQVKGTGPEGRIIKKDIDSFVPTKAAPAAAAAAPPGPRVAPTP- 401
Query: 94 TSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS-----------SKK 142
+ F D+P + IR+ IA+RL++ KQT PH YLS K+
Sbjct: 402 -------------AGVFIDIPISNIRRVIAQRLMQSKQTIPHYYLSVDVNMGEVLLVRKE 448
Query: 143 HNI------KVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFD-AIDISIAVATEKG 195
N K+SVND +IKA A+A VPEANS W + ++ + +D+S+AV+T G
Sbjct: 449 LNKMLEGKGKISVNDFIIKASALACLKVPEANSSW---MDTVIRQNHVVDVSVAVSTPAG 505
Query: 196 LMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAII 253
L+TPIV NA K + I+ +V LA +A GKL PHEFQGGTF+ISNLGMF + F AII
Sbjct: 506 LITPIVFNAHIKGLETIASDVVSLASKAREGKLQPHEFQGGTFTISNLGMFGIKNFSAII 565
Query: 254 NTPLAGILVVGRGNQVVELVIGRNEIP-AVVTKMNLTLSADHRVFEGKVGCAFFS 307
N P A IL +G +L+ NE V + M++TLS DHRV +G VG + +
Sbjct: 566 NPPQACILAIGASED--KLIPADNEKGFDVASVMSVTLSCDHRVVDGAVGAQWLA 618
>sp|Q5M729|OPD23_ARATH Dihydrolipoyllysine-residue acetyltransferase component 3 of
pyruvate dehydrogenase complex, mitochondrial
OS=Arabidopsis thaliana GN=At1g54220 PE=1 SV=1
Length = 539
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 166/299 (55%), Gaps = 45/299 (15%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKS--EKASSRSSSHTEKTSPSFHP 92
SP A+ L ++ + S ++ +GP G ++K D+ + S + A+++ S T+ +P+
Sbjct: 250 SPLARKLAEDNNVPLSDIEGTGPEGRIVKADIDEYLASSGKGATAKPSKSTDSKAPALD- 308
Query: 93 QTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS------------S 140
+ D+P++QIRK A RL KQT PH YL+ S
Sbjct: 309 -----------------YVDIPHSQIRKVTASRLAFSKQTIPHYYLTVDTCVDKLMALRS 351
Query: 141 KKHNIK-------VSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATE 193
+ ++ K +SVND+V+KA A+AL+ VP+ NS W + I F ++I++AV TE
Sbjct: 352 QLNSFKEASGGKRISVNDLVVKAAALALRKVPQCNSSWT--DDYIRQFKNVNINVAVQTE 409
Query: 194 KGLMTPIVRNADQKSISAISMEVKELAERAGK--LAPHEFQGGTFSISNLGM-FPVDQFC 250
GL P+V++AD+K +S I EV+ LA++A + L P +++GGTF++SNLG F + QFC
Sbjct: 410 NGLYVPVVKDADRKGLSTIGEEVRLLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFC 469
Query: 251 AIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSAL 309
A++N P A IL VG + V G ++ + M +TLS DHRV +G +G + A
Sbjct: 470 AVVNPPQAAILAVGSAEKRVVPGNGPDQF-NFASYMPVTLSCDHRVVDGAIGAEWLKAF 527
>sp|O59816|ODP2_SCHPO Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=lat1 PE=3 SV=1
Length = 483
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 151/302 (50%), Gaps = 46/302 (15%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQT 94
SP A+ L E LD S ++ SGP G ++K D+ E P P+
Sbjct: 189 SPLARKLAEEKDLDLSQIRGSGPNGRIIKVDI-----------------ENFKPVVAPKP 231
Query: 95 S--------PAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSKKH--- 143
S + ++ +EDLP + +RK IA RL E K PH Y++ +
Sbjct: 232 SNEAAAKATTPAASAADAAAPGDYEDLPLSNMRKIIASRLAESKNMNPHYYVTVSVNMEK 291
Query: 144 --------------NIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIA 189
K+SVND+VIKA AL+ VPE N+ W + I + +DIS+A
Sbjct: 292 IIRLRAALNAMADGRYKLSVNDLVIKATTAALRQVPEVNAAW--MGDFIRQYKNVDISMA 349
Query: 190 VATEKGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVD 247
VAT GL+TP++RN ++ IS K+ +RA KL P E+QGGTF+ISNLGMFPVD
Sbjct: 350 VATPSGLITPVIRNTHALGLAEISTLAKDYGQRARNNKLKPEEYQGGTFTISNLGMFPVD 409
Query: 248 QFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFS 307
QF AIIN P A IL VG V + V M TLS+DHRV +G + F +
Sbjct: 410 QFTAIINPPQACILAVGTTVDTVVPDSTSEKGFKVAPIMKCTLSSDHRVVDGAMAARFTT 469
Query: 308 AL 309
AL
Sbjct: 470 AL 471
>sp|Q19749|ODP2_CAEEL Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Caenorhabditis
elegans GN=F23B12.5 PE=1 SV=1
Length = 507
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 160/297 (53%), Gaps = 52/297 (17%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQT 94
SP AK L E+GLD S + SGP G +L D+ +A ++ ++ T T
Sbjct: 223 SPFAKKLAAENGLDLSGVSGSGPGGRILASDL------SQAPAKGATST----------T 266
Query: 95 SPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK------------- 141
+ AVS + D+P + +RK IA+RL E K T PH YL+S+
Sbjct: 267 TQAVS-------GQDYTDIPLSNMRKTIAKRLTESKSTIPHYYLTSEIQLDTLLQVREKL 319
Query: 142 ---------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVAT 192
K+S+ND +IKA A+A + VPEANSYW I +D+S+AV+T
Sbjct: 320 NGLLAKGTSGQATKISINDFIIKASALACQRVPEANSYWM--DSFIRENHHVDVSVAVST 377
Query: 193 EKGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMF-PVDQF 249
GL+TPI+ NA K ++ I+ E+ ELA+RA GKL PHEFQGGTF++SNLGMF V F
Sbjct: 378 PAGLITPIIFNAHAKGLATIASEIVELAQRAREGKLQPHEFQGGTFTVSNLGMFGSVSDF 437
Query: 250 CAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFF 306
AIIN P + IL +G + +LV E + M +TLS DHR +G VG +
Sbjct: 438 TAIINPPQSCILAIGGASD--KLVPDEAEGYKKIKTMKVTLSCDHRTVDGAVGAVWL 492
>sp|P12695|ODP2_YEAST Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=LAT1 PE=1
SV=1
Length = 482
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 161/317 (50%), Gaps = 25/317 (7%)
Query: 14 SPPFNSSSHDAKVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSE 73
S P S A Q R F SP AK + E G+ + +GP G + K D+ + ++
Sbjct: 158 SAPEAKKSDVAAPQGRIFA--SPLAKTIALEKGISLKDVHGTGPRGRITKADIESYLEKS 215
Query: 74 KASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTA 133
S +S +P+ ++ + + S+ED+P + +R I RLL+ Q
Sbjct: 216 SKQSSQTSGAAAATPAAATSST-TAGSAPSPSSTASYEDVPISTMRSIIGERLLQSTQGI 274
Query: 134 PHLYLSSK-----------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETE 176
P +SSK K+S+ND+++KA+ VA K VP+AN+YW
Sbjct: 275 PSYIVSSKISISKLLKLRQSLNATANDKYKLSINDLLVKAITVAAKRVPDANAYWLPNEN 334
Query: 177 EIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGG 234
I F +D+S+AVAT GL+TPIV+N + K +S IS E+KEL +RA KLAP EFQGG
Sbjct: 335 VIRKFKNVDVSVAVATPTGLLTPIVKNCEAKGLSQISNEIKELVKRARINKLAPEEFQGG 394
Query: 235 TFSISNLGM-FPVDQFCAIINTPLAGILVVGRGNQV-VELVIGRNEIPAVVTKMNLTLSA 292
T ISN+GM V+ F +IIN P + IL + +V VE N + ++ +T +
Sbjct: 395 TICISNMGMNNAVNMFTSIINPPQSTILAIATVERVAVEDAAAENGF-SFDNQVTITGTF 453
Query: 293 DHRVFEGKVGCAFFSAL 309
DHR +G G F L
Sbjct: 454 DHRTIDGAKGAEFMKEL 470
>sp|P20285|ODP2_NEUCR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=mrp-3 PE=1 SV=2
Length = 458
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 51/296 (17%)
Query: 36 PSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTS 95
P+AK L E G+D +++ SGP G + + DV A+ S A+ +++
Sbjct: 180 PAAKRLAREKGIDLRNVKGSGPGGKITEEDVKKALASAPAAGAAAA-------------- 225
Query: 96 PAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLS---------------- 139
++ D+P + +RK IA RL E PH ++S
Sbjct: 226 -------------AYTDVPISGMRKTIAARLKESVTENPHFFVSTNLSVSKLLKLRQALN 272
Query: 140 -SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLMT 198
S K+SVND +IKA+ +A K VP NS W I F+ +D+S+AVAT GL+T
Sbjct: 273 SSADGRYKLSVNDFLIKAMGIASKRVPTVNSSWRDGV--IRQFETVDVSVAVATPNGLIT 330
Query: 199 PIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFP-VDQFCAIINT 255
PIV+ + K + +IS VKELA++A GKL P E+QGG+ SISN+GM P V F AIIN
Sbjct: 331 PIVKGVEGKGLESISAAVKELAKKARDGKLKPEEYQGGSISISNMGMNPAVQSFTAIINP 390
Query: 256 PLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSA--DHRVFEGKVGCAFFSAL 309
P A IL VG +V V + V + ++A DH+V +G VG + L
Sbjct: 391 PQAAILAVGAPQKVAVPVENEDGTTGVSWDEQIIVTASFDHKVVDGAVGAEWIREL 446
>sp|P37942|ODB2_BACSU Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Bacillus subtilis (strain
168) GN=bfmBB PE=3 SV=1
Length = 424
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 151/296 (51%), Gaps = 27/296 (9%)
Query: 33 KISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHP 92
+ SP+ L EHG+D + +G G + + D+ I++ ++ + +P+
Sbjct: 116 RYSPAVLRLAGEHGIDLDQVTGTGAGGRITRKDIQRLIETGGVQEQNPEELKTAAPAPKS 175
Query: 93 QTSPAVSQGSNLELSDSFE-DLPNTQIRKAIARRLLELKQTAPHLY---------LSSKK 142
+ P + ++ S + + ++P T +RKAIA + K PH + + + +
Sbjct: 176 ASKPEPKEETSYPASAAGDKEIPVTGVRKAIASNMKRSKTEIPHAWTMMEVDVTNMVAYR 235
Query: 143 HNIKVSVND----------IVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVAT 192
++IK S +KAVA ALK P+ NS W ++I+ I+ISIAVAT
Sbjct: 236 NSIKDSFKKTEGFNLTFFAFFVKAVAQALKEFPQMNSMW--AGDKIIQKKDINISIAVAT 293
Query: 193 EKGLMTPIVRNADQKSISAISMEVKELAE--RAGKLAPHEFQGGTFSISNLGMFPVDQFC 250
E L P+++NAD+K+I I+ ++ LA+ R GKL + QGGTF+++N G F Q
Sbjct: 294 EDSLFVPVIKNADEKTIKGIAKDITGLAKKVRDGKLTADDMQGGTFTVNNTGSFGSVQSM 353
Query: 251 AIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFF 306
IIN P A IL V + V V+ N + AV +NL LS DHRV +G V C F
Sbjct: 354 GIINYPQAAILQV--ESIVKRPVVMDNGMIAVRDMVNLCLSLDHRVLDGLV-CGRF 406
>sp|Q6FYD4|ODO2_BARQU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
quintana (strain Toulouse) GN=sucB PE=3 SV=1
Length = 410
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 152/306 (49%), Gaps = 46/306 (15%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAI-KSEKASSRSSSHTEKTSPSFHPQ 93
+PSA L+ E+ + S + SG G +LK DVL A+ + KAS+ ++ T +S + Q
Sbjct: 118 APSAAKLMAENNIAKSDISGSGKRGQILKEDVLGALAQGTKASTSVATLTASSSSAAPIQ 177
Query: 94 TSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLY---------------- 137
E+ + E + T++R+ IARRL + + TA L
Sbjct: 178 -----------EMRE--ERVRMTKLRQTIARRLKDAQNTAAMLTTFNEVDMSAVMDLRKR 224
Query: 138 ---LSSKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEK 194
L KKH +K+ KAV ALK P N+ ++ +IV + ++ IAV T+K
Sbjct: 225 YKDLFEKKHGVKLGFMGFFTKAVCHALKEFPTVNA--EIDGTDIVYKNYVNAGIAVGTDK 282
Query: 195 GLMTPIVRNADQKSISAISMEVKELAE--RAGKLAPHEFQGGTFSISNLGMFPVDQFCAI 252
GL+ P+VR+ADQ S++ I E+ L R GKLA + QGGTF+I+N G++ I
Sbjct: 283 GLVVPVVRDADQMSLAEIEKEISRLGRLARDGKLAVSDMQGGTFTITNGGVYGSLMSTPI 342
Query: 253 INTPLAGILVVGRGNQVVE---LVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSAL 309
+N P +GIL G ++ +V+G I + M L LS DHR+ +G+ F +
Sbjct: 343 LNAPQSGIL----GMHAIKERAMVVGGQII--ICPMMYLALSYDHRIVDGQEAVTFLVRV 396
Query: 310 CSNFRD 315
+ D
Sbjct: 397 KESLED 402
>sp|P45302|ODO2_HAEIN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=sucB PE=3 SV=1
Length = 409
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 154/319 (48%), Gaps = 45/319 (14%)
Query: 18 NSSSHDAKVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASS 77
NS +H+A SP + L+ EH L A +Q SG G L + D+ E+ +
Sbjct: 107 NSHNHNADQ--------SPVIRRLLAEHDLQADQIQGSGVGGRLTREDI------EREIA 152
Query: 78 RSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTA---- 133
+ + K + T V+ + E + +P T++RK IA RLLE K +
Sbjct: 153 KRQAQQVKQEAATEQNTISTVAYSARSE-----KRVPMTRLRKRIAERLLEAKNSTAMLT 207
Query: 134 --------PHLYLS-------SKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEI 178
P + L K+H++++ IKAV ALK PE N+ +++ +++
Sbjct: 208 TFNEVDMQPIMTLRKTYGEKFEKQHSVRLGFMSFYIKAVVEALKRYPEVNA--SIDGDDV 265
Query: 179 VLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAE--RAGKLAPHEFQGGTF 236
V + DISIAV+T +GL+TP++R+ D+ S++ I ++K LAE R GKL + GG F
Sbjct: 266 VYHNYFDISIAVSTPRGLVTPVLRDCDKLSMAEIEKQIKALAEKGRDGKLTVEDLTGGNF 325
Query: 237 SISNLGMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRV 296
+I+N G+F IIN P + IL + + + E I N + M L LS DHR+
Sbjct: 326 TITNGGVFGSLMSTPIINPPQSAILGM---HAIKERPIALNGQVVIRPMMYLALSYDHRL 382
Query: 297 FEGKVGCAFFSALCSNFRD 315
+G+ F + D
Sbjct: 383 IDGRESVGFLVTIKELLED 401
>sp|Q92J43|ODO2_RICCN Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=sucB PE=3
SV=1
Length = 395
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 152/294 (51%), Gaps = 48/294 (16%)
Query: 34 ISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQ 93
++PS + L+ E+ LD ++++ +G G + KGDVLA I + S+
Sbjct: 112 LAPSVQKLVTENKLDPNNIKGTGRDGRITKGDVLATINTTTTSA---------------- 155
Query: 94 TSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSS------------- 140
PA+S+ SN E + + +++RK IA+RL + + TA L +
Sbjct: 156 --PAISK-SNEE---RVQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQ 209
Query: 141 ------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEK 194
KKH +K+ +KA ALK +P N+ ++ +++V + DI +AV TE+
Sbjct: 210 YKEEFEKKHAVKLGFMSFFVKATIEALKLIPSVNA--EIDGDDLVYKNYYDIGVAVGTEQ 267
Query: 195 GLMTPIVRNADQKSISAISMEVKELAE--RAGKLAPHEFQGGTFSISNLGMFPVDQFCAI 252
GL+ P+VR+AD+ + + + LA+ R GKL+ + GGTFSISN G++ I
Sbjct: 268 GLVVPVVRDADKMGFAEVEKTIGILAKQAREGKLSMADLSGGTFSISNGGVYGSLLSTPI 327
Query: 253 INTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFF 306
IN P +GIL + + + ++ G+ EI + M + LS DHR+ +GK G +F
Sbjct: 328 INPPQSGILGLHKTEERAVVIDGKIEIRPM---MYIALSYDHRIIDGKEGVSFL 378
>sp|Q8CT13|ODP2_STAES Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=pdhC PE=3 SV=1
Length = 433
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 153/306 (50%), Gaps = 31/306 (10%)
Query: 20 SSHDAKVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIK---SEKAS 76
S +V + K PS + E+G++ ++ SG G + K D+ A + SE+ S
Sbjct: 115 SQEKTEVDESKTVKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGGSSEEGS 174
Query: 77 SRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHL 136
+ S + +S + + A+ +G + ++ E +P +RKAIA+ ++ K TAPH+
Sbjct: 175 NTSVASESTSSDVVNASATQALPEG---DFPETTEKIP--AMRKAIAKAMVNSKHTAPHV 229
Query: 137 YLSSK------------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEI 178
L + + K++ V+KA+ ALK P N+ +N E E+
Sbjct: 230 TLMDEIDVQELWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEV 289
Query: 179 VLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTF 236
V +I IA T+KGL+ P+V++AD+KSI IS E+ ELA R GKL E +G T
Sbjct: 290 VHKHYWNIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATC 349
Query: 237 SISNLGMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRV 296
+ISN+G F +IN P IL +GR Q + ++ EI A + L+LS DHR
Sbjct: 350 TISNIGSAGGQWFTPVINHPEVAILGIGRIAQ--KPIVKDGEIVAAPV-LALSLSFDHRQ 406
Query: 297 FEGKVG 302
+G G
Sbjct: 407 IDGATG 412
>sp|P86197|ODP2_MESAU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex, mitochondrial (Fragments)
OS=Mesocricetus auratus GN=DLAT PE=1 SV=1
Length = 219
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 93/146 (63%), Gaps = 7/146 (4%)
Query: 164 VPEANSYWNVETEEIVLFD-AIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER 222
VPEANS W + ++ + +D+S+AV+T GL+TPIV NA K + I+ +V LA +
Sbjct: 65 VPEANSSW---MDTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGLETIASDVVSLASK 121
Query: 223 AGKLAPHEFQGGTFSISNLGMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIP-A 281
GKL PHEFQGGTF+ISNLGMF + F AIIN P A IL +G +L+ NE
Sbjct: 122 EGKLQPHEFQGGTFTISNLGMFGIKNFSAIINPPQACILAIGASED--KLIPADNEKGFD 179
Query: 282 VVTKMNLTLSADHRVFEGKVGCAFFS 307
V + M++TLS DHRV +G VG + +
Sbjct: 180 VASVMSVTLSCDHRVVDGAVGAQWLA 205
>sp|Q1RHI5|ODO2_RICBR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
bellii (strain RML369-C) GN=sucB PE=3 SV=1
Length = 400
Score = 121 bits (303), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 150/294 (51%), Gaps = 45/294 (15%)
Query: 34 ISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQ 93
++PS + L+ E+ LD ++++ +G G + KGDVL + + ++ S++ + K S
Sbjct: 114 LAPSVQKLVTENKLDPNNIKGTGKDGRITKGDVLETMNAPTPAATSTTSSAKAS------ 167
Query: 94 TSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSS------------- 140
+ E + +++RK IA+RL + + TA L +
Sbjct: 168 -------------EERVERVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRGK 214
Query: 141 ------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEK 194
KKH +K+ ++A ALK +P N+ ++ +++V + DI +AV TE+
Sbjct: 215 YKDEFEKKHGVKLGFMSFFVRATIEALKLIPSVNA--EIDGDDLVYKNYYDIGVAVGTEQ 272
Query: 195 GLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAI 252
GL+ P+VR+AD+ + I + LA++A GKL+ + GGTFSISN G++ I
Sbjct: 273 GLVVPVVRDADKMGFADIEKTIGGLAKKARDGKLSMADLSGGTFSISNGGVYGSLLSTPI 332
Query: 253 INTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFF 306
IN P +GIL + + + V + G+ EI + M + LS DHR+ +GK +F
Sbjct: 333 INPPQSGILGLHKTEERVVAIDGKIEIRPM---MYIALSYDHRIIDGKEAVSFL 383
>sp|Q4UKI7|ODO2_RICFE Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sucB PE=3 SV=1
Length = 401
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 153/294 (52%), Gaps = 46/294 (15%)
Query: 34 ISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQ 93
++PS + L+ E+ LD ++++ +G G + KGDVL I + A++
Sbjct: 116 LAPSVQKLVTENKLDPNNIKGTGRDGRITKGDVLETINTPSAAT---------------- 159
Query: 94 TSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSS------------- 140
++P V++ + + + + +++RK IA+RL + + TA L +
Sbjct: 160 STPTVNKTN----EERVQRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQ 215
Query: 141 ------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEK 194
KKH +K+ +KA ALK +P N+ ++ +++V + DI +AV TE+
Sbjct: 216 YKEEFEKKHLVKLGFMSFFVKATIEALKLIPSVNA--EIDGDDLVYKNYYDIGVAVGTEQ 273
Query: 195 GLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAI 252
GL+ P+VR+AD+ + + + LA++A GKL+ + GGTFSISN G++ I
Sbjct: 274 GLVVPVVRDADKMGFAEVEKAIGTLAKKAREGKLSMADLSGGTFSISNGGVYGSLLSTPI 333
Query: 253 INTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFF 306
IN P +GIL + + + ++ G+ EI + M + LS DHR+ +GK G +F
Sbjct: 334 INPPQSGILGLHKTEERAVVIDGKIEIRPM---MYIALSYDHRIIDGKEGVSFL 384
>sp|O31550|ACOC_BACSU Dihydrolipoyllysine-residue acetyltransferase component of acetoin
cleaving system OS=Bacillus subtilis (strain 168)
GN=acoC PE=3 SV=1
Length = 398
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 66/317 (20%)
Query: 28 KRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTS 87
K+ KISP A+ + + GLD L+ +GP G ++K DV A+ +K
Sbjct: 113 KKDRMKISPVARKIAEKAGLDLKQLKGTGPGGRIVKDDVTKALAEQKKD----------- 161
Query: 88 PSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK------ 141
Q P Q + +++P T +RK IA R+ E + L ++ K
Sbjct: 162 -----QAKPVSEQKA--------QEIPVTGMRKVIAARMQESLANSAQLTITMKADITKL 208
Query: 142 -------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISI 188
++ K+++ V +A +AL+ P NS++ + E I+ + + +
Sbjct: 209 ATLQKQLSPTAEERYGTKLTITHFVSRAAVLALQAHPVLNSFY--QNERIITHPHVHLGM 266
Query: 189 AVATEKGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPV 246
AVA E GL+ P++R+A++ S+ ++ + E A++A G+ E QG TFSI+NLG F V
Sbjct: 267 AVALENGLVVPVIRHAEKLSLIELAQSISENAKKAREGRAGSEELQGSTFSITNLGAFGV 326
Query: 247 DQFCAIINTPLAGILVVG--------RGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFE 298
+ F I+N P GIL +G +G ++V I + L+L+ DHR +
Sbjct: 327 EHFTPILNPPETGILGIGASYDTPVYQGEEIVRSTI-----------LPLSLTFDHRACD 375
Query: 299 GKVGCAFFSALCSNFRD 315
G AF A+ + +
Sbjct: 376 GAPAAAFLKAMKTYLEE 392
>sp|P65636|ODP2_STAAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
N315) GN=pdhC PE=1 SV=1
Length = 430
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 29/300 (9%)
Query: 25 KVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTE 84
+V + K PS + E G++ ++ SG G + K DV A + ++ + S
Sbjct: 117 EVDENRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAAS 176
Query: 85 KTSPSFHPQTSPAVSQGSNLE--LSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK- 141
TS +PA +LE ++ E +P +R+AIA+ ++ K TAPH+ L +
Sbjct: 177 ATSEEV--AETPAAPAAVSLEGDFPETTEKIP--AMRRAIAKAMVNSKHTAPHVTLMDEI 232
Query: 142 -----------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAI 184
+ K++ V+KA+ ALK P N+ +N E EIV
Sbjct: 233 DVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYW 292
Query: 185 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTFSISNLG 242
+I IA T++GL+ P+V++AD+KSI IS E+ ELA R GKL E +G T +ISN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 243 MFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVG 302
F +IN P IL +GR Q + ++ EI A + L+LS DHR +G G
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQ--KPIVKDGEIVAAPV-LALSLSFDHRQIDGATG 409
>sp|P65635|ODP2_STAAM Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=pdhC PE=1 SV=1
Length = 430
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 29/300 (9%)
Query: 25 KVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTE 84
+V + K PS + E G++ ++ SG G + K DV A + ++ + S
Sbjct: 117 EVDENRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAAS 176
Query: 85 KTSPSFHPQTSPAVSQGSNLE--LSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK- 141
TS +PA +LE ++ E +P +R+AIA+ ++ K TAPH+ L +
Sbjct: 177 ATSEEV--AETPAAPAAVSLEGDFPETTEKIP--AMRRAIAKAMVNSKHTAPHVTLMDEI 232
Query: 142 -----------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAI 184
+ K++ V+KA+ ALK P N+ +N E EIV
Sbjct: 233 DVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYW 292
Query: 185 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTFSISNLG 242
+I IA T++GL+ P+V++AD+KSI IS E+ ELA R GKL E +G T +ISN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 243 MFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVG 302
F +IN P IL +GR Q + ++ EI A + L+LS DHR +G G
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQ--KPIVKDGEIVAAPV-LALSLSFDHRQIDGATG 409
>sp|Q8NX76|ODP2_STAAW Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MW2) GN=pdhC PE=3 SV=1
Length = 430
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 146/300 (48%), Gaps = 29/300 (9%)
Query: 25 KVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTE 84
+V + K PS + E G++ ++ SG G + K DV A + ++ + S
Sbjct: 117 EVDENRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAAS 176
Query: 85 KTSPSFHPQTSPAVSQGSNLE--LSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK- 141
TS +PA LE ++ E +P +R+AIA+ ++ K TAPH+ L +
Sbjct: 177 ATSEEV--AETPAAPAAVTLEGDFPETTEKIP--AMRRAIAKAMVNSKHTAPHVTLMDEI 232
Query: 142 -----------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAI 184
+ K++ V+KA+ ALK P N+ +N E EIV
Sbjct: 233 DVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYW 292
Query: 185 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTFSISNLG 242
+I IA T++GL+ P+V++AD+KSI IS E+ ELA R GKL E +G T +ISN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 243 MFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVG 302
F +IN P IL +GR Q + ++ EI A + L+LS DHR +G G
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQ--KPIVKDGEIVAAPV-LALSLSFDHRQIDGATG 409
>sp|Q6GAB9|ODP2_STAAS Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MSSA476) GN=pdhC PE=3 SV=1
Length = 430
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 146/300 (48%), Gaps = 29/300 (9%)
Query: 25 KVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTE 84
+V + K PS + E G++ ++ SG G + K DV A + ++ + S
Sbjct: 117 EVDENRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAAS 176
Query: 85 KTSPSFHPQTSPAVSQGSNLE--LSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK- 141
TS +PA LE ++ E +P +R+AIA+ ++ K TAPH+ L +
Sbjct: 177 ATSEEV--AETPAAPAAVTLEGDFPETTEKIP--AMRRAIAKAMVNSKHTAPHVTLMDEI 232
Query: 142 -----------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAI 184
+ K++ V+KA+ ALK P N+ +N E EIV
Sbjct: 233 DVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYW 292
Query: 185 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTFSISNLG 242
+I IA T++GL+ P+V++AD+KSI IS E+ ELA R GKL E +G T +ISN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 243 MFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVG 302
F +IN P IL +GR Q + ++ EI A + L+LS DHR +G G
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQ--KPIVKDGEIVAAPV-LALSLSFDHRQIDGATG 409
>sp|Q5HGY9|ODP2_STAAC Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
COL) GN=pdhC PE=3 SV=1
Length = 430
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 146/300 (48%), Gaps = 29/300 (9%)
Query: 25 KVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTE 84
+V + K PS + E G++ ++ SG G + K DV A + ++ + S
Sbjct: 117 EVDENRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAAS 176
Query: 85 KTSPSFHPQTSPAVSQGSNLE--LSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK- 141
TS +PA LE ++ E +P +R+AIA+ ++ K TAPH+ L +
Sbjct: 177 ATSEEV--AETPAAPAAVTLEGDFPETTEKIP--AMRRAIAKAMVNSKHTAPHVTLMDEI 232
Query: 142 -----------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAI 184
+ K++ V+KA+ ALK P N+ +N E EIV
Sbjct: 233 DVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYW 292
Query: 185 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTFSISNLG 242
+I IA T++GL+ P+V++AD+KSI IS E+ ELA R GKL E +G T +ISN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 243 MFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVG 302
F +IN P IL +GR Q + ++ EI A + L+LS DHR +G G
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQ--KPIVKDGEIVAAPV-LALSLSFDHRQIDGATG 409
>sp|Q5HQ74|ODP2_STAEQ Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=pdhC PE=3 SV=1
Length = 433
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 154/306 (50%), Gaps = 31/306 (10%)
Query: 20 SSHDAKVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIK---SEKAS 76
S +V + K PS + E+G++ ++ SG G + K D+ A + SE+ S
Sbjct: 115 SQEKTEVDESKTVKAMPSVRKYARENGVNIKAVNGSGKNGRITKEDIDAYLNGGSSEEGS 174
Query: 77 SRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHL 136
+ S++ +S + + A+ +G + ++ E +P +RKAIA+ ++ K TAPH+
Sbjct: 175 NTSAASESTSSDVVNASATQALPEG---DFPETTEKIP--AMRKAIAKAMVNSKHTAPHV 229
Query: 137 YLSSK------------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEI 178
L + + K++ V+KA+ ALK P N+ +N E E+
Sbjct: 230 TLMDEIDVQELWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEV 289
Query: 179 VLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTF 236
V +I IA T+KGL+ P+V++AD+KSI IS E+ ELA R GKL E +G T
Sbjct: 290 VHKHYWNIGIAADTDKGLLVPVVKHADRKSIFEISDEINELAVKARDGKLTSEEMKGATC 349
Query: 237 SISNLGMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRV 296
+ISN+G F +IN P IL +GR Q + ++ EI A + L+LS DHR
Sbjct: 350 TISNIGSAGGQWFTPVINHPEVAILGIGRIAQ--KPIVKDGEIVAAPV-LALSLSFDHRQ 406
Query: 297 FEGKVG 302
+G G
Sbjct: 407 IDGATG 412
>sp|Q6GHZ0|ODP2_STAAR Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus (strain
MRSA252) GN=pdhC PE=3 SV=1
Length = 430
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 147/300 (49%), Gaps = 29/300 (9%)
Query: 25 KVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTE 84
+V + K PS + E G++ ++ SG G + K DV A + ++ + S
Sbjct: 117 EVDENRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESAAS 176
Query: 85 KTSPSFHPQTSPAVSQGSNLE--LSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK- 141
T+ +PA +LE ++ E +P +R+AIA+ ++ K TAPH+ L +
Sbjct: 177 ATNEEV--AETPAAPAAVSLEGDFPETTEKIP--AMRRAIAKAMVNSKHTAPHVTLMDEI 232
Query: 142 -----------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAI 184
+ K++ V+KA+ ALK P N+ +N E EIV
Sbjct: 233 DVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYW 292
Query: 185 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTFSISNLG 242
+I IA T++GL+ P+V++AD+KSI IS E+ ELA R GKL E +G T +ISN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 243 MFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVG 302
F +IN P IL +GR Q + ++ EI A + L+LS DHR +G G
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQ--KPIVKDGEIVAAPV-LALSLSFDHRQIDGATG 409
>sp|Q59821|ODP2_STAAU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Staphylococcus aureus GN=pdhC
PE=3 SV=1
Length = 430
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 147/300 (49%), Gaps = 29/300 (9%)
Query: 25 KVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTE 84
+V + K PS + E G++ ++ SG G + K DV A + ++ + S
Sbjct: 117 EVDENRTVKAMPSVRKYAREKGVNIKAVSGSGKNGRITKEDVDAYLNGGAPTASNESADS 176
Query: 85 KTSPSFHPQTSPAVSQGSNLE--LSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK- 141
T+ +PA +LE ++ E +P +R+AIA+ ++ K TAPH+ L +
Sbjct: 177 ATNEEV--AETPAAPAAVSLEGDFPETTEKIP--AMRRAIAKAMVNSKHTAPHVTLMDEI 232
Query: 142 -----------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAI 184
+ K++ V+KA+ ALK P N+ +N E EIV
Sbjct: 233 DVQALWDHRKKFKEIAAEQGTKLTFLPYVVKALVSALKKYPALNTSFNEEAGEIVHKHYW 292
Query: 185 DISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTFSISNLG 242
+I IA T++GL+ P+V++AD+KSI IS E+ ELA R GKL E +G T +ISN+G
Sbjct: 293 NIGIAADTDRGLLVPVVKHADRKSIFQISDEINELAVKARDGKLTADEMKGATCTISNIG 352
Query: 243 MFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVG 302
F +IN P IL +GR Q + ++ EI A + L+LS DHR +G G
Sbjct: 353 SAGGQWFTPVINHPEVAILGIGRIAQ--KPIVKDGEIVAAPV-LALSLSFDHRQIDGATG 409
>sp|P0AFG6|ODO2_ECOLI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Escherichia coli
(strain K12) GN=sucB PE=1 SV=2
Length = 405
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 155/318 (48%), Gaps = 40/318 (12%)
Query: 19 SSSHDAKVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSR 78
+ A +++++ +SP+ + L+ EH LDAS+++ +G G L + DV EK ++
Sbjct: 99 AQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDV------EKHLAK 152
Query: 79 SSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYL 138
+ + + + ++ S + +P T++RK +A RLLE K + L
Sbjct: 153 APAKESAPAAAAPAAQPALAAR--------SEKRVPMTRLRKRVAERLLEAKNSTAMLTT 204
Query: 139 SS-------------------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIV 179
+ K+H I++ +KAV ALK PE N+ +++ +++V
Sbjct: 205 FNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNA--SIDGDDVV 262
Query: 180 LFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTFS 237
+ D+S+AV+T +GL+TP++R+ D ++ I ++KELA R GKL + GG F+
Sbjct: 263 YHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFT 322
Query: 238 ISNLGMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVF 297
I+N G+F IIN P + IL + V G+ EI + M L LS DHR+
Sbjct: 323 ITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEI---LPMMYLALSYDHRLI 379
Query: 298 EGKVGCAFFSALCSNFRD 315
+G+ F + D
Sbjct: 380 DGRESVGFLVTIKELLED 397
>sp|P0AFG7|ODO2_ECO57 Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Escherichia coli
O157:H7 GN=sucB PE=1 SV=2
Length = 405
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 155/318 (48%), Gaps = 40/318 (12%)
Query: 19 SSSHDAKVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSR 78
+ A +++++ +SP+ + L+ EH LDAS+++ +G G L + DV EK ++
Sbjct: 99 AQRQQASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDV------EKHLAK 152
Query: 79 SSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYL 138
+ + + + ++ S + +P T++RK +A RLLE K + L
Sbjct: 153 APAKESAPAAAAPAAQPALAAR--------SEKRVPMTRLRKRVAERLLEAKNSTAMLTT 204
Query: 139 SS-------------------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIV 179
+ K+H I++ +KAV ALK PE N+ +++ +++V
Sbjct: 205 FNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNA--SIDGDDVV 262
Query: 180 LFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELA--ERAGKLAPHEFQGGTFS 237
+ D+S+AV+T +GL+TP++R+ D ++ I ++KELA R GKL + GG F+
Sbjct: 263 YHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFT 322
Query: 238 ISNLGMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVF 297
I+N G+F IIN P + IL + V G+ EI + M L LS DHR+
Sbjct: 323 ITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEI---LPMMYLALSYDHRLI 379
Query: 298 EGKVGCAFFSALCSNFRD 315
+G+ F + D
Sbjct: 380 DGRESVGFLVTIKELLED 397
>sp|Q8GCY1|ODO2_BARVB Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bartonella
vinsonii subsp. berkhofii GN=sucB PE=3 SV=1
Length = 411
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 149/302 (49%), Gaps = 32/302 (10%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQT 94
+PSA L+ E+ + S + SG G +LK DVL + +S + ++P +
Sbjct: 113 APSAAKLMAENNIAKSDILGSGKRGQILKEDVLNVLAQGVKTSPPAVSASSSTPVSVSSS 172
Query: 95 SPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLY----------------- 137
+ A Q E+ + E + T++R+ IARRL + + TA L
Sbjct: 173 AVAPVQ----EMRE--ERVRMTKLRQTIARRLKDAQNTAAMLTTFNEVDMSAVMGLRKRY 226
Query: 138 --LSSKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKG 195
L KKH +K+ KAV ALK +P N+ ++ +I+ + ++ IAV T+KG
Sbjct: 227 KDLFEKKHGVKLGFMGFFTKAVCHALKELPAVNA--EIDGTDIIYKNYVNAGIAVGTDKG 284
Query: 196 LMTPIVRNADQKSISAISMEVKELAE--RAGKLAPHEFQGGTFSISNLGMFPVDQFCAII 253
L+ P+VR+ADQ S++ I E+ L R GKLA + QGGTF+I+N G++ I+
Sbjct: 285 LVVPVVRDADQMSLAEIEKEIGRLGRLARDGKLAVSDMQGGTFTITNGGVYGSLMSTPIL 344
Query: 254 NTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNF 313
N P +GIL + + +V G+ A+ M L LS DHR+ +G+ F + +
Sbjct: 345 NAPQSGILGMHAIKERAMVVDGQ---IAIRPMMYLALSYDHRIVDGQEAVTFLVRVKESL 401
Query: 314 RD 315
D
Sbjct: 402 ED 403
>sp|P21883|ODP2_BACSU Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Bacillus subtilis (strain 168)
GN=pdhC PE=1 SV=2
Length = 442
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 143/284 (50%), Gaps = 29/284 (10%)
Query: 36 PSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTS 95
PS + E G+D + SG G ++K D+ + + ++ ++ E +P
Sbjct: 144 PSVRKYAREKGVDIRKVTGSGNNGRVVKEDIDSFVN---GGAQEAAPQETAAPQ-ETAAK 199
Query: 96 PAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK-------------- 141
PA + E ++ E + + IRKAIA+ ++ K TAPH+ L +
Sbjct: 200 PAAAPAPEGEFPETREKM--SGIRKAIAKAMVNSKHTAPHVTLMDEVDVTNLVAHRKQFK 257
Query: 142 ----KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLM 197
IK++ V+KA+ ALK P N+ + +T+E++ +I IA TEKGL+
Sbjct: 258 QVAADQGIKLTYLPYVVKALTSALKKFPVLNTSIDDKTDEVIQKHYFNIGIAADTEKGLL 317
Query: 198 TPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAIINT 255
P+V+NAD+KS+ IS E+ LA +A GKLAP E +G + +I+N+G F +IN
Sbjct: 318 VPVVKNADRKSVFEISDEINGLATKAREGKLAPAEMKGASCTITNIGSAGGQWFTPVINH 377
Query: 256 PLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEG 299
P IL +GR + E I R+ + L+LS DHR+ +G
Sbjct: 378 PEVAILGIGR---IAEKAIVRDGEIVAAPVLALSLSFDHRMIDG 418
>sp|P11961|ODP2_GEOSE Dihydrolipoyllysine-residue acetyltransferase component of pyruvate
dehydrogenase complex OS=Geobacillus stearothermophilus
GN=pdhC PE=1 SV=3
Length = 428
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 145/284 (51%), Gaps = 32/284 (11%)
Query: 36 PSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTS 95
PS + E G+D +Q +G G +LK D+ A + + +++ + + P T+
Sbjct: 133 PSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLAGGAKPAPAAAEEKAAPAAAKPATT 192
Query: 96 PAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSK-------------- 141
E ++ E + + IR+AIA+ ++ K TAPH+ L +
Sbjct: 193 EG-------EFPETREKM--SGIRRAIAKAMVHSKHTAPHVTLMDEADVTKLVAHRKKFK 243
Query: 142 ----KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLM 197
+ IK++ V+KA+ AL+ P N+ + ETEEI+ +I IA T++GL+
Sbjct: 244 AIAAEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLL 303
Query: 198 TPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAIINT 255
P++++AD+K I A++ E+ ELAE+A GKL P E +G + +I+N+G F +IN
Sbjct: 304 VPVIKHADRKPIFALAQEINELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVINH 363
Query: 256 PLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEG 299
P IL +GR + E I R+ + L+LS DHR+ +G
Sbjct: 364 PEVAILGIGR---IAEKPIVRDGEIVAAPMLALSLSFDHRMIDG 404
>sp|Q68XI8|ODO2_RICTY Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sucB PE=3 SV=1
Length = 398
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 146/294 (49%), Gaps = 46/294 (15%)
Query: 34 ISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQ 93
++PS + L+ E+ LD ++++ +G G + K DVL I +T + H
Sbjct: 113 LAPSVQKLVTENKLDPNNIKGTGRGGRITKYDVLETI-----------NTTPITIETHAI 161
Query: 94 TSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSS------------- 140
+ + +S ++RK IA+RL + + TA L +
Sbjct: 162 NKTNEERTQRVRMS---------RLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQ 212
Query: 141 ------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEK 194
KKH +K+ +KA ALK +P N+ ++ ++++ + DI +AV TE+
Sbjct: 213 YKEEFEKKHTVKLGFMSFFVKATIEALKLIPSINA--EIDGDDLLYKNYYDIGVAVGTEQ 270
Query: 195 GLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAI 252
GL+ P++R+AD+ S + I + LA++A GKL+ + GGTFSISN G++ I
Sbjct: 271 GLVVPVIRDADKMSFADIEQAIGNLAKKAREGKLSISDLSGGTFSISNGGVYGSLLSTPI 330
Query: 253 INTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFF 306
IN P +GIL + + + ++ G+ EI + M + LS DHR+ +GK G +F
Sbjct: 331 INPPQSGILGLHKTEERAVVIDGKIEIRPM---MYIALSYDHRIIDGKEGVSFL 381
>sp|Q9ZDY4|ODO2_RICPR Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Rickettsia
prowazekii (strain Madrid E) GN=sucB PE=3 SV=1
Length = 401
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 153/294 (52%), Gaps = 46/294 (15%)
Query: 34 ISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQ 93
++PS + L+ E+ LD ++++ +G G + K DVL I + + +
Sbjct: 116 LAPSVQKLVTENKLDPNNIKGTGRGGRITKCDVLETINTTPVTIET-------------- 161
Query: 94 TSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSS------------- 140
PA+++ +N E + + + +++RK IA+RL + + TA L +
Sbjct: 162 --PALNK-TNEERT---QRVRMSRLRKTIAQRLKDSQNTAAILTTFNEIDMSKVIALRNQ 215
Query: 141 ------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEK 194
KKH +K+ +KA ALK +P N+ ++ ++++ + DI +AV T++
Sbjct: 216 YKEEFEKKHTVKLGFMSFFVKATIEALKLIPSINA--EIDGDDLLYKNYYDIGVAVGTDQ 273
Query: 195 GLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAI 252
GL+ P+VR+AD+ + + + +LA++A GKL+ + GGTFSISN G++ I
Sbjct: 274 GLVVPVVRDADKMGFADVEQAIGDLAKKAREGKLSMSDLSGGTFSISNGGVYGSLLSTPI 333
Query: 253 INTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFF 306
IN P +GIL + + + ++ G+ EI + M + LS DHR+ +GK G +F
Sbjct: 334 INPPQSGILGLHKTEERAVVIDGKIEIRPM---MYIALSYDHRIIDGKEGVSFL 384
>sp|Q9I1M0|ODB2_PSEAE Lipoamide acyltransferase component of branched-chain alpha-keto
acid dehydrogenase complex OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=bkdB PE=1 SV=1
Length = 428
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 143/281 (50%), Gaps = 13/281 (4%)
Query: 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQT 94
SP+ + + G++ +Q SGP G +L D+ A + + + +RS + + Q
Sbjct: 142 SPAVRQRARDLGIELQFVQGSGPAGRVLHEDLDAYLTQDGSVARSGGAAQGYAERHDEQA 201
Query: 95 SPAVSQGSNL--ELSDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSSKKHNIKVSVNDI 152
P + + ++ D+ +P+ + I + +L+ HL K+++
Sbjct: 202 VPVIGLRRKIAQKMQDAKRRIPHFSYVEEID--VTDLEALRAHLNQKWGGQRGKLTLLPF 259
Query: 153 VIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAI 212
+++A+ VAL++ P+ N+ ++ E E + + A+ + IA ++ GLM P++R+A+ + +
Sbjct: 260 LVRAMVVALRDFPQLNARYDDEAEVVTRYGAVHVGIATQSDNGLMVPVLRHAESRDLWGN 319
Query: 213 SMEVKELAE--RAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINTPLAGILVVGRGNQVV 270
+ EV LAE R+GK E G T ++S+LG+ +IN P I+ V N++V
Sbjct: 320 ASEVARLAEAARSGKAQRQELSGSTITLSSLGVLGGIVSTPVINHPEVAIVGV---NRIV 376
Query: 271 E--LVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSAL 309
E +V+G N + V MNL+ S DHRV +G AF A+
Sbjct: 377 ERPMVVGGNIV--VRKMMNLSSSFDHRVVDGMDAAAFIQAV 415
>sp|Q89AJ6|ODO2_BUCBP Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)
GN=sucB PE=3 SV=1
Length = 410
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 36/303 (11%)
Query: 35 SPSAKLLIPEHGL-DASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQ 93
SP+ + LI H L D +Q +G L + D+L +K+ + S+T K ++
Sbjct: 114 SPTVRRLISMHDLRDVDIIQGTGTKNRLTRKDILNYLKNIR------SNTNKKINNYDLN 167
Query: 94 TSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAPHLY---------------- 137
+ N S + + T++RK I+ RLL K L
Sbjct: 168 AYNFNTTHKN---HRSIKRVKMTRLRKKISERLLSTKNNTASLTTFNEVNMQSILNLRRK 224
Query: 138 ---LSSKKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEK 194
L +KH IK+ + +KAV ALK PE N+ +++ +EI+ ++ DISIA++T +
Sbjct: 225 YGELFKQKHGIKLGLMSFYVKAVIEALKIFPEINA--SIDNDEIIYYNYFDISIAISTPR 282
Query: 195 GLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAI 252
GL+TP+++NAD S++ I +++K+ +E+ KL + GG F+I+N G+F +
Sbjct: 283 GLVTPVLKNADLMSMAEIEIKIKDFSEKGKNSKLTIDDLIGGNFTITNGGVFGSLFSTPL 342
Query: 253 INTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSN 312
IN P + IL + ++ +V +E V M L LS DHR+ +GK F +
Sbjct: 343 INPPQSAILGMHAIHKRPVIV---DENIEVHPMMYLALSYDHRLIDGKESVGFLLKIKEF 399
Query: 313 FRD 315
D
Sbjct: 400 LED 402
>sp|P16263|ODO2_BACSU Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Bacillus
subtilis (strain 168) GN=odhB PE=3 SV=2
Length = 417
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 154/330 (46%), Gaps = 54/330 (16%)
Query: 15 PPFNSSSHDAKVQKRSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEK 74
P S +A+ + +S T SPSA+ L E G+D S + P G + K DV A EK
Sbjct: 105 PAAQEVSEEAQSEAKSRTIASPSARKLAREKGIDLSQVPTGDPLGRVRKQDVEA---YEK 161
Query: 75 ASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFEDLPNTQIRKAIARRLLELKQTAP 134
+S+ + ++ + Q S E ++ R+ IA+RL+E++QT+
Sbjct: 162 PASKPAPQQKQQPQAQKAQQS----------FDKPVEVQKMSRRRQTIAKRLVEVQQTSA 211
Query: 135 HLYLSSK-------------------KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVET 175
L ++ ++ +K+ KAV ALK P N+ ++
Sbjct: 212 MLTTFNEVDMTAVMNLRKRRKDQFFEQNEVKLGFMSFFTKAVVAALKKYPLLNA--EIQG 269
Query: 176 EEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAERA--GKLAPHEFQG 233
+E+++ DI IAVA ++GL+ P+VR+AD+ + + I E+ ELA++A KL E QG
Sbjct: 270 DELIVKKFYDIGIAVAADEGLVVPVVRDADRLTFAGIEKEIGELAKKARNNKLTLSELQG 329
Query: 234 GTFSISNLGMFPVDQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTK-------- 285
G+F+I+N G F I+N+P GIL G ++L P + +
Sbjct: 330 GSFTITNGGTFGSLMSTPILNSPQVGIL----GMHKIQLR------PVAIDEERFENRPM 379
Query: 286 MNLTLSADHRVFEGKVGCAFFSALCSNFRD 315
M + LS DHR+ +GK F + + D
Sbjct: 380 MYIALSYDHRIVDGKEAVGFLVTIKNLLED 409
>sp|P57389|ODO2_BUCAI Dihydrolipoyllysine-residue succinyltransferase component of
2-oxoglutarate dehydrogenase complex OS=Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain APS)
GN=sucB PE=3 SV=1
Length = 420
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 40/219 (18%)
Query: 116 TQIRKAIARRLLELKQTA------------PHLYLS-------SKKHNIKVSVNDIVIKA 156
T++R+ IA RLL+ K P + L KKHN+++ +KA
Sbjct: 197 TRLRQRIAERLLDSKNNTAMLTTFHEVNMKPIILLRKKYGEDFEKKHNVRIGFMSFFVKA 256
Query: 157 VAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEV 216
V ALKN PE N+Y ++ +IV + DISIA++T +GL+TP++RNAD +++ I ++
Sbjct: 257 VIQALKNFPEINAY--IDQTDIVFYKNFDISIAISTPRGLITPVIRNADTMTMAEIEKKI 314
Query: 217 KELAERA--GKLAPHEFQGGTFSISNLGMFPVDQFCAIINTPLAGILVVGRGNQVVELVI 274
K+ + + K+ E GG F+I+N G+F IIN P IL G V++
Sbjct: 315 KDFSIKGLQNKINIKELMGGNFTITNGGVFGSLMSTPIINPPQTAIL----GMHVIQ--- 367
Query: 275 GRNEIPAVVT-------KMNLTLSADHRVFEGKVGCAFF 306
E P VV M L LS DHR+ +GK F
Sbjct: 368 ---ERPVVVNGQIKILPMMYLALSYDHRLIDGKESVGFL 403
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.129 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,331,346
Number of Sequences: 539616
Number of extensions: 4308030
Number of successful extensions: 14477
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 14036
Number of HSP's gapped (non-prelim): 186
length of query: 316
length of database: 191,569,459
effective HSP length: 117
effective length of query: 199
effective length of database: 128,434,387
effective search space: 25558443013
effective search space used: 25558443013
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)