Query 037652
Match_columns 316
No_of_seqs 200 out of 1185
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 03:05:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037652.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037652hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14843 dihydrolipoamide acet 100.0 3.9E-76 8.4E-81 566.2 28.1 276 29-316 46-342 (347)
2 PRK11857 dihydrolipoamide acet 100.0 1.5E-75 3.2E-80 553.7 28.4 278 32-316 2-300 (306)
3 TIGR02927 SucB_Actino 2-oxoglu 100.0 3.8E-74 8.2E-79 586.3 30.9 284 31-316 276-582 (590)
4 PRK05704 dihydrolipoamide succ 100.0 3.3E-73 7.1E-78 556.7 28.4 268 31-316 112-400 (407)
5 TIGR01347 sucB 2-oxoglutarate 100.0 8E-73 1.7E-77 553.1 29.3 266 31-316 110-396 (403)
6 TIGR01349 PDHac_trf_mito pyruv 100.0 1.8E-72 3.8E-77 556.0 28.7 274 31-316 138-430 (435)
7 PLN02744 dihydrolipoyllysine-r 100.0 6.7E-72 1.5E-76 559.7 28.0 265 31-316 248-534 (539)
8 PLN02528 2-oxoisovalerate dehy 100.0 1.4E-71 3.1E-76 546.8 29.2 280 31-316 109-408 (416)
9 TIGR01348 PDHac_trf_long pyruv 100.0 6.8E-71 1.5E-75 558.3 29.0 276 33-316 246-541 (546)
10 PRK11854 aceF pyruvate dehydro 100.0 5E-66 1.1E-70 531.2 29.9 280 31-316 327-628 (633)
11 PRK11855 dihydrolipoamide acet 100.0 2E-64 4.4E-69 512.2 29.6 279 33-316 244-542 (547)
12 PRK11856 branched-chain alpha- 100.0 2.2E-63 4.8E-68 489.2 28.7 265 32-316 125-405 (411)
13 KOG0557 Dihydrolipoamide acety 100.0 9.5E-64 2.1E-68 481.9 20.0 275 31-316 173-465 (470)
14 COG0508 AceF Pyruvate/2-oxoglu 100.0 5.4E-63 1.2E-67 484.2 24.2 268 30-316 111-398 (404)
15 PF00198 2-oxoacid_dh: 2-oxoac 100.0 5.4E-62 1.2E-66 445.4 24.2 204 109-316 3-226 (231)
16 KOG0558 Dihydrolipoamide trans 100.0 3.4E-61 7.4E-66 448.0 18.2 277 29-316 168-466 (474)
17 PLN02226 2-oxoglutarate dehydr 100.0 1.3E-60 2.9E-65 469.9 22.3 202 110-316 234-456 (463)
18 PTZ00144 dihydrolipoamide succ 100.0 4.4E-60 9.6E-65 462.9 22.5 201 111-316 190-411 (418)
19 KOG0559 Dihydrolipoamide succi 100.0 8E-52 1.7E-56 386.9 16.9 202 110-316 228-450 (457)
20 PRK12270 kgd alpha-ketoglutara 100.0 1.3E-50 2.8E-55 416.8 24.0 204 110-314 115-349 (1228)
21 PF00302 CAT: Chloramphenicol 99.7 7.6E-15 1.6E-19 132.3 18.9 167 132-310 24-206 (206)
22 PRK13757 chloramphenicol acety 99.6 1E-14 2.2E-19 132.5 17.4 160 143-315 49-214 (219)
23 PF02817 E3_binding: e3 bindin 99.5 2E-14 4.4E-19 95.7 3.0 38 31-68 2-39 (39)
24 COG4845 Chloramphenicol O-acet 99.3 6E-11 1.3E-15 104.9 15.9 173 131-316 26-214 (219)
25 PRK14843 dihydrolipoamide acet 97.8 8.2E-06 1.8E-10 79.2 2.5 42 32-73 6-47 (347)
26 PF07247 AATase: Alcohol acety 90.5 3.7 8.1E-05 41.1 12.1 29 285-313 451-480 (480)
27 TIGR02946 acyl_WS_DGAT acyltra 87.9 5.8 0.00013 39.2 11.2 146 144-314 247-440 (446)
28 PRK09294 acyltransferase PapA5 80.4 29 0.00063 34.0 12.3 90 145-246 228-347 (416)
29 PF00668 Condensation: Condens 68.2 88 0.0019 27.9 13.1 30 285-314 128-157 (301)
30 COG4908 Uncharacterized protei 64.1 1E+02 0.0022 31.0 11.3 69 144-221 236-317 (439)
31 PLN02663 hydroxycinnamoyl-CoA: 57.4 12 0.00026 37.1 3.9 29 286-314 145-173 (431)
32 PLN00140 alcohol acetyltransfe 56.4 12 0.00026 37.5 3.7 29 286-314 148-176 (444)
33 PF02458 Transferase: Transfer 54.5 15 0.00032 36.0 3.9 29 286-314 147-175 (432)
34 PLN02481 Omega-hydroxypalmitat 51.4 17 0.00038 36.1 3.9 29 286-314 158-186 (436)
35 PF07247 AATase: Alcohol acety 50.2 18 0.0004 36.1 3.9 31 285-315 140-170 (480)
36 PLN03157 spermidine hydroxycin 45.3 24 0.00053 35.1 3.9 152 112-314 21-174 (447)
37 PF03698 UPF0180: Uncharacteri 38.6 32 0.00069 26.5 2.7 23 196-219 56-78 (80)
38 TIGR03443 alpha_am_amid L-amin 37.6 2.7E+02 0.0059 31.8 11.1 139 144-314 43-198 (1389)
39 PF07687 M20_dimer: Peptidase 37.5 34 0.00073 26.4 2.8 29 287-315 78-106 (111)
40 smart00226 LMWPc Low molecular 29.4 35 0.00075 28.1 1.7 33 32-69 40-72 (140)
41 COG1725 Predicted transcriptio 29.1 15 0.00032 30.7 -0.6 19 35-53 35-53 (125)
42 COG3453 Uncharacterized protei 23.7 58 0.0013 27.3 2.0 36 35-72 47-82 (130)
43 PRK03094 hypothetical protein; 22.9 82 0.0018 24.3 2.6 23 195-218 55-77 (80)
44 TIGR01796 CM_mono_aroH monofun 22.4 78 0.0017 26.2 2.5 37 204-240 10-49 (117)
45 PF01451 LMWPc: Low molecular 21.3 74 0.0016 26.0 2.3 36 30-69 42-77 (138)
46 cd02185 AroH Chorismate mutase 20.8 88 0.0019 25.9 2.5 37 204-240 10-49 (117)
No 1
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=100.00 E-value=3.9e-76 Score=566.22 Aligned_cols=276 Identities=33% Similarity=0.470 Sum_probs=237.0
Q ss_pred CCCCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCC
Q 037652 29 RSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSD 108 (316)
Q Consensus 29 ~~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (316)
.+.+.+||+||+||+|+||||++|+|||++|||+++||++|+...... +... ++.+.. +.+. .+... +...
T Consensus 46 ~~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~k~DV~~~~~~~~~~-~~~~---~~~~~~--~~~~-~~~~~--~~~~ 116 (347)
T PRK14843 46 TNVVRISPLAKRIALEHNIAWQEIQGTGHRGKIMKKDVLALLPENIEN-DSIK---SPAQIE--KVEE-VPDNV--TPYG 116 (347)
T ss_pred cccccCCchhhHHHHHcCCCHhhCCCCCCCCcccHHHHHHHHhccccC-cccc---CCCCCc--cccC-CCccc--ccCC
Confidence 566679999999999999999999999999999999999997532111 0000 000000 0000 00000 0111
Q ss_pred CceeecChHHHHHHHHHHHHHhhcCCeEEEee--------------c-----ccCccccHHHHHHHHHHHHHhhCcccce
Q 037652 109 SFEDLPNTQIRKAIARRLLELKQTAPHLYLSS--------------K-----KHNIKVSVNDIVIKAVAVALKNVPEANS 169 (316)
Q Consensus 109 ~~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~--------------~-----~~~~kls~~~~likA~a~al~~~P~lN~ 169 (316)
..+.+|+++|||.||++|++||++|||||++. + ..|.++||++||+||++.||++||.||+
T Consensus 117 ~~~~v~l~~~r~~ia~~m~~S~~~ip~~~~~~evd~t~l~~~r~~~~~~~~~~~~~kls~~~~likA~a~AL~~~P~~Na 196 (347)
T PRK14843 117 EIERIPMTPMRKVIAQRMVESYLTAPTFTLNYEVDMTEMLALRKKVLEPIMEATGKKTTVTDLLSLAVVKTLMKHPYINA 196 (347)
T ss_pred cceeeeCcHHHHHHHHHHHHHHhhCCeEEEEEEEEchHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHhCcceeE
Confidence 24568999999999999999999999999876 1 1367999999999999999999999999
Q ss_pred EEecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCC
Q 037652 170 YWNVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVD 247 (316)
Q Consensus 170 ~~~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~ 247 (316)
+|+++...++++++|||||||++++||+||||||++++||.||++++++|+++ +|+|+++||+||||||||+|+||+.
T Consensus 197 ~~~~~~~~i~~~~~vnigvAV~~~~GL~vPVIr~a~~~sl~eIa~~i~~l~~~Ar~~kL~~~d~~GgTfTISNlG~~G~~ 276 (347)
T PRK14843 197 SLTEDGKTIITHNYVNLAMAVGMDNGLMTPVVYNAEKMSLSELVVAFKDVIGRTLDGKLAPSELQNSTFTISNLGMFGVQ 276 (347)
T ss_pred EEecCCCeEEEecccceEEEEecCCCeEeCcCCCcccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCCeEEEeCCCCCccc
Confidence 99865446999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred CeEEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 248 QFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 248 ~~~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
+|+|||||||+||||+|+++++|++.+| ++++|++|+||||||||+|||++||+||++|+++||+|
T Consensus 277 ~~tpIInpPq~aIlgvG~i~~~pv~~~g---~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~lE~p 342 (347)
T PRK14843 277 SFGPIINQPNSAILGVSSTIEKPVVVNG---EIVIRPIMSLGLTIDHRVVDGMAGAKFMKDLKELIETP 342 (347)
T ss_pred ceeccccCCceEEEecCCcceeeEEECC---eEEEEeEEEEEEecchhhhCcHHHHHHHHHHHHHhcCH
Confidence 9999999999999999999999988765 89999999999999999999999999999999999997
No 2
>PRK11857 dihydrolipoamide acetyltransferase; Reviewed
Probab=100.00 E-value=1.5e-75 Score=553.66 Aligned_cols=278 Identities=29% Similarity=0.367 Sum_probs=235.1
Q ss_pred CCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCce
Q 037652 32 TKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFE 111 (316)
Q Consensus 32 ~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (316)
+++||+||+||+|+||||++|+|||++|||+++||++|+.+..... .+... .+.+......+...+... ......+
T Consensus 2 ~~asP~aR~lA~e~gvdl~~v~gtG~~GrI~k~DV~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~ 77 (306)
T PRK11857 2 ILATPIARALAKKLGIDISLLKGSGRDGKILAEDVENFIKSLKSAP-TPAEA-ASVSSAQQAAKTAAPAAA--PPKLEGK 77 (306)
T ss_pred cCCCchhHHHHHHcCCCHHHCCCCCCCCceeHHHHHHHhhcccccc-CCccc-cccccccccccccCCccc--ccCCCce
Confidence 5789999999999999999999999999999999999985421100 00000 000000000000000000 0011235
Q ss_pred eecChHHHHHHHHHHHHHhhcCCeEEEee--------------c-----ccCccccHHHHHHHHHHHHHhhCcccceEEe
Q 037652 112 DLPNTQIRKAIARRLLELKQTAPHLYLSS--------------K-----KHNIKVSVNDIVIKAVAVALKNVPEANSYWN 172 (316)
Q Consensus 112 ~~pls~~Rk~ia~~m~~S~~~iP~~~~~~--------------~-----~~~~kls~~~~likA~a~al~~~P~lN~~~~ 172 (316)
.+|+++||++||++|++||+++||+++.. + +.|.|+||++||+||+++||++||.+|++|+
T Consensus 78 ~~~ls~~R~~ia~~M~~S~~~ip~~~~~~evd~t~l~~~r~~~~~~~~~~~g~kls~~~~likA~a~AL~~~P~~Na~~~ 157 (306)
T PRK11857 78 REKVAPIRKAIARAMTNSWSNVAYVNLVNEIDMTKLWDLRKSVKDPVLKTEGVKLTFLPFIAKAILIALKEFPIFAAKYD 157 (306)
T ss_pred eccCcHHHHHHHHHHHHhhccCCeEEEEEEEEchHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHHHHHhCcHhhEEEe
Confidence 68999999999999999999999999865 1 2478999999999999999999999999998
Q ss_pred cCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCeE
Q 037652 173 VETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQFC 250 (316)
Q Consensus 173 ~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~~ 250 (316)
++.+.++++++|||||||++++||++|||+|+|++||.||++++++|+++ +|+|+++||+||||||||+|++|+.+|+
T Consensus 158 ~~~~~i~~~~~vnigvAv~~~~GL~vPVI~~a~~~sl~eIa~~i~~l~~~Ar~~kL~~~dl~ggTfTISNlG~~G~~~~t 237 (306)
T PRK11857 158 EATSELVYPDTLNLGIAVDTEAGLMVPVIKNAQKLSIVEIAKEISRLAKAARERKIKPDEMKGGSFTITNYGSVGSLYGV 237 (306)
T ss_pred CCCCEEEEcCCccEEEEEECCCCEEeCCcCCcCcCCHHHHHHHHHHHHHHHHcCCCChhhcCCccEEEeCCCCCCcccee
Confidence 75457999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred EeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 251 AIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 251 pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
|||||||+||||+|+++++|++.+| ++++|++|+|||+||||||||++|++||++|+++||+|
T Consensus 238 piIn~pq~aILgvG~i~~~pvv~~g---~i~~r~~m~lslt~DHRviDGa~aa~Fl~~lk~~LE~p 300 (306)
T PRK11857 238 PVINYPELAIAGVGAIIDKAIVKNG---QIVAGKVMHLTVAADHRWIDGATIGRFASRVKELLEKP 300 (306)
T ss_pred cccCCCccceeecccceEEeEEECC---EEEEeeeeEEeEecchhhhCcHHHHHHHHHHHHHhcCH
Confidence 9999999999999999999998655 89999999999999999999999999999999999997
No 3
>TIGR02927 SucB_Actino 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase. This model represents an Actinobacterial clade of E2 enzyme, a component of the 2-oxoglutarate dehydrogenase complex involved in the TCA cycle. These proteins have multiple domains including the catalytic domain (pfam00198), one or two biotin domains (pfam00364) and an E3-component binding domain (pfam02817).
Probab=100.00 E-value=3.8e-74 Score=586.31 Aligned_cols=284 Identities=26% Similarity=0.384 Sum_probs=236.3
Q ss_pred CCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCc
Q 037652 31 FTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSF 110 (316)
Q Consensus 31 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (316)
.+.+||+|||||+||||||++|+|||++|||+|+||++|+.........+....+.........+...+. +.. ....+
T Consensus 276 ~~~asP~aR~lA~e~gvdl~~v~GtG~~GrI~k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~ 353 (590)
T TIGR02927 276 SPYVTPLVRKLAAEHGIDLNSVKGTGIGGRIRKQDVLAAAEGAKAAAEAPAAEAAAAAPAAAAAASASPA-PAK-AHLRG 353 (590)
T ss_pred cccCCchhHHHHHHcCCCHHHCCCCCCCCeEeHHHHHHHHhccccccccccccccccCccccccccCCCc-ccc-ccccC
Confidence 5679999999999999999999999999999999999998542111000000000000000000000000 000 00124
Q ss_pred eeecChHHHHHHHHHHHHHhhcCCeEEEee--------------c-----ccCccccHHHHHHHHHHHHHhhCcccceEE
Q 037652 111 EDLPNTQIRKAIARRLLELKQTAPHLYLSS--------------K-----KHNIKVSVNDIVIKAVAVALKNVPEANSYW 171 (316)
Q Consensus 111 ~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~--------------~-----~~~~kls~~~~likA~a~al~~~P~lN~~~ 171 (316)
+++||++|||+||++|++||++|||||++. + ..+.|+||++||+||+++||++||.||++|
T Consensus 354 ~~~pls~~rk~ia~~m~~S~~~iPh~~~~~evdvt~l~~~R~~l~~~~~~~~~~kls~~~~iiKA~a~AL~~~P~~Na~~ 433 (590)
T TIGR02927 354 TTQKANRIREITAKKTREALQASAQLTQLHEVDMTKIAALRARAKAAFAEKEGVNLTFLPFFAKAVIDALKAHPNVNASY 433 (590)
T ss_pred ceeeccHHHHHHHHHHHHHhccCCeEEEEeEEEcHHHHHHHHHHHhhhHHhcCCcccHHHHHHHHHHHHHHhCCHhheEE
Confidence 568999999999999999999999999986 1 136799999999999999999999999999
Q ss_pred ecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCe
Q 037652 172 NVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQF 249 (316)
Q Consensus 172 ~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~ 249 (316)
+++.++|+++++|||||||++++||+||||||++++||.+|++++++|++| +|+|+++||+||||||||+|+||+.+|
T Consensus 434 ~~~~~~i~~~~~vnigvAv~t~~GL~vPvIk~a~~~sl~~ia~~i~~l~~kAr~gkL~p~e~~GgTfTISNlG~~G~~~~ 513 (590)
T TIGR02927 434 NADTKEITYHAAEHLGFAVDTDAGLLSPVIHNAGDLSLGEIAKAIADIAARARNGKLKPDDLAGGTFTITNIGSEGALFD 513 (590)
T ss_pred ecCCCEEEEeCCccEEEEEECCCCcEecccCCcccCCHHHHHHHHHHHHHHHHcCCCChHHhCCCeEEEECCCCCCccce
Confidence 865557999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred EEeecCCCeEEEEeccceeEEEEecCCCC--CcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 250 CAIINTPLAGILVVGRGNQVVELVIGRNE--IPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 250 ~pii~~p~~aIL~vG~i~~~p~~~~g~~~--~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
+|||||||+||||+|+++++|+++++.++ .+++|++|+||||||||||||+++|+||++|+++||||
T Consensus 514 tpIIn~PqvaILgvG~i~~~pv~~~~~~g~~~~~~~~~m~lsls~DHRviDGa~aa~Fl~~lk~~LE~~ 582 (590)
T TIGR02927 514 TPILIPPQAAILGTGAIVKRPRVITDEDGIDSIAIRQMCHLPLTYDHQLIDGADAGRFLTTIKDRLEEA 582 (590)
T ss_pred eceecCCCeEEEEcccceEEEEEeccCCCcccEEEEeeEEEeeeccchhcCcHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999988642222 49999999999999999999999999999999999997
No 4
>PRK05704 dihydrolipoamide succinyltransferase; Validated
Probab=100.00 E-value=3.3e-73 Score=556.74 Aligned_cols=268 Identities=36% Similarity=0.508 Sum_probs=233.2
Q ss_pred CCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCc
Q 037652 31 FTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSF 110 (316)
Q Consensus 31 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (316)
.+.+||+||+||+|+||||++|+|||++|||+++||++|+...... ... ++.+ ...+. +.. . .....
T Consensus 112 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~-~~~----~~~~---~~~~~--~~~--~-~~~~~ 178 (407)
T PRK05704 112 NDALSPAARKLAAENGLDASAVKGTGKGGRVTKEDVLAALAAAAAA-PAA----PAAA---APAAA--PAP--L-GARPE 178 (407)
T ss_pred cccCCchhhhHHhhcCCChhhCCCCCCCCcccHHHHHHHhhccccc-CCC----CCCC---CCcCC--Ccc--c-cCCcc
Confidence 3579999999999999999999999999999999999997432100 000 0000 00000 000 0 01113
Q ss_pred eeecChHHHHHHHHHHHHHhhcCCeEEEee--------------c-----ccCccccHHHHHHHHHHHHHhhCcccceEE
Q 037652 111 EDLPNTQIRKAIARRLLELKQTAPHLYLSS--------------K-----KHNIKVSVNDIVIKAVAVALKNVPEANSYW 171 (316)
Q Consensus 111 ~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~--------------~-----~~~~kls~~~~likA~a~al~~~P~lN~~~ 171 (316)
+.+|+++|||+||++|++||++|||||++. + +.|.|+||++||+||+++||++||.||++|
T Consensus 179 ~~vpls~~rk~ia~~m~~S~~~iPh~~~~~evd~~~l~~~r~~~~~~~~~~~~~kls~~~~likA~a~AL~~~P~~Na~~ 258 (407)
T PRK05704 179 ERVPMTRLRKTIAERLLEAQNTTAMLTTFNEVDMTPVMDLRKQYKDAFEKKHGVKLGFMSFFVKAVVEALKRYPEVNASI 258 (407)
T ss_pred eEeeChHHHHHHHHHHHHHhhcCCeEEEEEEEeHHHHHHHHHHHHhhhHhhcCCCcCHHHHHHHHHHHHHHhCcHhhcEE
Confidence 568999999999999999999999999875 1 236799999999999999999999999999
Q ss_pred ecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCe
Q 037652 172 NVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQF 249 (316)
Q Consensus 172 ~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~ 249 (316)
+++. +++++++||||||++++||++|||+|+|++||.||++++++|+++ +|+|+++||+||||||||+|+||+.+|
T Consensus 259 ~~~~--i~~~~~~nIgiAv~~~~GLivPVI~~a~~~sl~eIa~~~~~l~~~ar~g~L~~~d~~ggTfTiSNlG~~G~~~~ 336 (407)
T PRK05704 259 DGDD--IVYHNYYDIGIAVGTPRGLVVPVLRDADQLSFAEIEKKIAELAKKARDGKLSIEELTGGTFTITNGGVFGSLMS 336 (407)
T ss_pred cCCe--EEEcCCCCeEEEEECCCceEeCcCCCcccCCHHHHHHHHHHHHHHHHcCCCChHHcCCceEEEecCCcccccce
Confidence 8754 999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred EEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 250 CAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 250 ~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
+|||||||+||||+|++.++|++.+| ++++|++|+||||||||||||++||+||++|+++||||
T Consensus 337 tpiIn~pq~aILgvG~i~~~pv~~~g---~i~~r~~~~lsls~DHRviDGa~aa~Fl~~l~~~le~p 400 (407)
T PRK05704 337 TPIINPPQSAILGMHKIKERPVAVNG---QIVIRPMMYLALSYDHRIIDGKEAVGFLVTIKELLEDP 400 (407)
T ss_pred eccccCCcEEEEEcccceEEeEEECC---EEEEEEEEEEEEEechhhhCcHHHHHHHHHHHHHhhCH
Confidence 99999999999999999999988755 89999999999999999999999999999999999997
No 5
>TIGR01347 sucB 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component). dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase.
Probab=100.00 E-value=8e-73 Score=553.09 Aligned_cols=266 Identities=33% Similarity=0.491 Sum_probs=233.2
Q ss_pred CCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCc
Q 037652 31 FTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSF 110 (316)
Q Consensus 31 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (316)
.+.+||+||+||+|+||||++|+|||++|||+++||++|+...... +. +++. .+.+. +. . .. ...
T Consensus 110 ~~~asP~aR~lA~e~gvdl~~v~gtG~~GrI~~~DV~~~~~~~~~~-~~------~~~~--~~~~~--~~--~-~~-~~~ 174 (403)
T TIGR01347 110 RPSLSPAARRLAKEHGIDLSAVPGTGVTGRVTKEDIIKKTEAPASA-QA------PAPA--AAAKA--PA--N-FT-RPE 174 (403)
T ss_pred cccCCchhhhHHHHcCCChhhCCCCCCCCcccHHHHHHhhhccccc-CC------CCCC--cccCC--cc--c-cC-CCc
Confidence 4568999999999999999999999999999999999997431100 00 0000 00000 00 0 00 113
Q ss_pred eeecChHHHHHHHHHHHHHhhcCCeEEEee--------------c-----ccCccccHHHHHHHHHHHHHhhCcccceEE
Q 037652 111 EDLPNTQIRKAIARRLLELKQTAPHLYLSS--------------K-----KHNIKVSVNDIVIKAVAVALKNVPEANSYW 171 (316)
Q Consensus 111 ~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~--------------~-----~~~~kls~~~~likA~a~al~~~P~lN~~~ 171 (316)
+.+||++|||+||++|++||++|||||++. + +.|.++||++||+||+++||++||.||++|
T Consensus 175 ~~~pls~~r~~ia~~m~~S~~~ip~~~~~~evd~t~l~~~r~~~~~~~~~~~~~kls~~~~likA~a~AL~~~P~~Na~~ 254 (403)
T TIGR01347 175 ERVKMTRLRQRIAERLKEAQNSTAMLTTFNEVDMSAVMELRKRYKEEFEKKHGVKLGFMSFFVKAVVAALKRFPEVNAEI 254 (403)
T ss_pred eEeeCcHHHHHHHHHHHHHhccCCEEEEEEEEEHHHHHHHHHHHHhhhHhhcCCCcCHHHHHHHHHHHHHHhCcHhheEE
Confidence 568999999999999999999999999875 1 236799999999999999999999999999
Q ss_pred ecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCe
Q 037652 172 NVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQF 249 (316)
Q Consensus 172 ~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~ 249 (316)
+++ ++++++++||||||++++||++||||++|++||.+|++++++|+++ +|+|+++||+||||||||+|+||+.+|
T Consensus 255 ~~~--~i~~~~~vnIgvAv~~~~GL~vPVIr~ad~~sl~eIa~~~~~l~~~ar~gkL~~~d~~ggTfTISNlG~~G~~~~ 332 (403)
T TIGR01347 255 DGD--DIVYKDYYDISVAVSTDRGLVVPVVRNADRMSFADIEKEIADLGKKARDGKLTLEDMTGGTFTITNGGVFGSLMS 332 (403)
T ss_pred cCC--EEEEcCCCCeEEEEECCCCeEECcCCCcccCCHHHHHHHHHHHHHHHHcCCCChhhcCCceEEEecCCcCcccce
Confidence 875 4999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred EEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 250 CAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 250 ~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
+|||||||+||||+|+++++|++.+| ++++|++|+||||||||||||++||+||++|+++||+|
T Consensus 333 tpiin~pq~aILgvG~i~~~pv~~~g---~i~~r~~m~lsLt~DHRviDGa~aa~Fl~~l~~~le~p 396 (403)
T TIGR01347 333 TPIINPPQSAILGMHGIKERPVAVNG---QIEIRPMMYLALSYDHRLIDGKEAVTFLVTIKELLEDP 396 (403)
T ss_pred eccccCCceEEEecccceEEEEEECC---eEEEEEEEEEEEEecchhhChHHHHHHHHHHHHHhcCH
Confidence 99999999999999999999998765 89999999999999999999999999999999999997
No 6
>TIGR01349 PDHac_trf_mito pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model represents one of several closely related clades of the dihydrolipoamide acetyltransferase subunit of the pyruvate dehydrogenase complex. It includes sequences from mitochondria and from alpha and beta branches of the proteobacteria, as well as from some other bacteria. Sequences from Gram-positive bacteria are not included. The non-enzymatic homolog protein X, which serves as an E3 component binding protein, falls within the clade phylogenetically but is rejected by its low score.
Probab=100.00 E-value=1.8e-72 Score=555.96 Aligned_cols=274 Identities=46% Similarity=0.655 Sum_probs=235.0
Q ss_pred CCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCc
Q 037652 31 FTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSF 110 (316)
Q Consensus 31 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (316)
.+++||+||+||+||||||++|+|||++|||+++||++|+......++. +... +.+...+.... ......
T Consensus 138 ~~~asP~vR~lA~e~gvdl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~-~~~~~~ 207 (435)
T TIGR01349 138 RIFASPLAKKLAKEKGIDLSAVAGSGPNGRIVKKDIESFVPQSPASANF--------QAAA-TTPATKKAAAP-VSTGSY 207 (435)
T ss_pred cccCCHHHHHHHHHcCCCHhHCCCCCCCCceeHHHHHHHHhcccccCCC--------cccc-ccccccccCCC-ccCCcc
Confidence 4679999999999999999999999999999999999998532111000 0000 00000000000 011124
Q ss_pred eeecChHHHHHHHHHHHHHhhcCCeEEEee--------------c---ccCccccHHHHHHHHHHHHHhhCcccceEEec
Q 037652 111 EDLPNTQIRKAIARRLLELKQTAPHLYLSS--------------K---KHNIKVSVNDIVIKAVAVALKNVPEANSYWNV 173 (316)
Q Consensus 111 ~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~--------------~---~~~~kls~~~~likA~a~al~~~P~lN~~~~~ 173 (316)
+.+||++|||+|+++|++||++|||+|++. + ..+.++||++||+||+++||++||.||++|++
T Consensus 208 ~~v~ls~~rk~ia~~m~~S~~~ip~~~~~~evd~t~l~~~r~~~~~~~~~~~klt~~~~l~kA~a~AL~~~P~~Na~~~~ 287 (435)
T TIGR01349 208 EDVPLSNIRKIIAKRLLESKQTIPHYYVSIECNVDKLLALRKELNAMASEVYKLSVNDFIIKASALALREVPEANSSWTD 287 (435)
T ss_pred eeecccHHHHHHHHHHHHHHhhCCeEEEEEEEEhHHHHHHHHHHHhhhhcCCcccHHHHHHHHHHHHHHhCcHhheEEeC
Confidence 668999999999999999999999999876 1 12679999999999999999999999999987
Q ss_pred CCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCeEE
Q 037652 174 ETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQFCA 251 (316)
Q Consensus 174 ~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~~p 251 (316)
+ +|+++++|||||||++++||++|||+|+|++||.||++++++|+++ +|+|+++||+||||||||+|+||+.+|+|
T Consensus 288 ~--~i~~~~~vnigvAv~~~~GL~vPvi~~a~~~sl~eia~~i~~l~~~ar~~~L~~~d~~ggTfTISNlG~~G~~~~tp 365 (435)
T TIGR01349 288 N--FIRRYKNVDISVAVATPDGLITPIVRNADAKGLSTISNEIKDLAKRARNNKLKPEEFQGGTFTISNLGMFGIKDFTA 365 (435)
T ss_pred C--eEEEeCCeeEEEEEECCCCeEECCCCCcccCCHHHHHHHHHHHHHHHhcCCCChhhcCCCeEEEecCCccCccceEC
Confidence 4 4999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred eecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 252 IINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 252 ii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
||||||+||||+|++.++|++++|.++.++++++|+||||||||||||++||+||++|+++||+|
T Consensus 366 iin~pq~aIlgvG~i~~~pv~~~~~~~~i~~~~~m~lsls~DHRviDGa~aa~Fl~~lk~~lE~p 430 (435)
T TIGR01349 366 IINPPQACILAVGAVEDVAVVDNDEEKGFAVASIMSVTLSCDHRVIDGAVGAEFLKSFKKYLENP 430 (435)
T ss_pred ccCCCceEEEEcccceEEeEEeCCccceeEEeeeEEEeEeecchhhCcHHHHHHHHHHHHHHhCH
Confidence 99999999999999999998876633349999999999999999999999999999999999997
No 7
>PLN02744 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
Probab=100.00 E-value=6.7e-72 Score=559.73 Aligned_cols=265 Identities=40% Similarity=0.644 Sum_probs=232.7
Q ss_pred CCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCc
Q 037652 31 FTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSF 110 (316)
Q Consensus 31 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (316)
.+.+||+||+||+||||||+.|+|||++|||+++||++|+........ .+++ .+.. .+ ...+
T Consensus 248 ~i~ASP~aRrLAre~GVDLs~V~GTGp~GRI~k~DV~a~~~~~~~~~~--------~~~~---~~~~------~~-~~~~ 309 (539)
T PLN02744 248 RIFASPLARKLAEDNNVPLSSIKGTGPDGRIVKADIEDYLASGGKGAT--------APPS---TDSK------AP-ALDY 309 (539)
T ss_pred cccCCchhHHHHHHcCCCHHHCCCCCCCCcccHHHHHHHhhccccccC--------CCCC---cccC------CC-CCcc
Confidence 367999999999999999999999999999999999999853211000 0000 0000 00 0123
Q ss_pred eeecChHHHHHHHHHHHHHhhcCCeEEEee--------------c-----ccCccccHHHHHHHHHHHHHhhCcccceEE
Q 037652 111 EDLPNTQIRKAIARRLLELKQTAPHLYLSS--------------K-----KHNIKVSVNDIVIKAVAVALKNVPEANSYW 171 (316)
Q Consensus 111 ~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~--------------~-----~~~~kls~~~~likA~a~al~~~P~lN~~~ 171 (316)
+++|+++|||+||++|++||++|||||++. + ..|.|+||++||+||+++||++||+||++|
T Consensus 310 ~~vpls~~Rk~IA~~m~~S~~~iPh~t~~~evdvt~L~~lR~~l~~~~~~~~g~kls~~~~liKA~a~AL~~~P~lNa~~ 389 (539)
T PLN02744 310 TDIPNTQIRKVTASRLLQSKQTIPHYYLTVDTRVDKLMALRSQLNSLQEASGGKKISVNDLVIKAAALALRKVPQCNSSW 389 (539)
T ss_pred ccccchhHHHHHHHHHHHHHhhCCeEEEEEEEEcHHHHHHHHHHHHHhhhcccCccCHHHHHHHHHHHHHHhCcHhheee
Confidence 568999999999999999999999999876 1 126799999999999999999999999999
Q ss_pred ecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCC-CCCCCC
Q 037652 172 NVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLG-MFPVDQ 248 (316)
Q Consensus 172 ~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG-~~G~~~ 248 (316)
+++ .|+++++|||||||++++||+||||+|+++++|.||++++++|+++ +|+|+++||+||||||||+| +||+.+
T Consensus 390 ~~~--~i~~~~~vnIgvAV~t~~GL~vPVIr~ad~~sl~eIa~ei~~L~~kAr~~kL~~~dl~GGTfTISNlGg~~G~~~ 467 (539)
T PLN02744 390 TDD--YIRQYHNVNINVAVQTENGLYVPVVKDADKKGLSTIAEEVKQLAQKARENSLKPEDYEGGTFTVSNLGGPFGIKQ 467 (539)
T ss_pred ccC--cEEEeCCcceEEEEECCCCeEECcCCCcccCCHHHHHHHHHHHHHHHHcCCCChhhcCCceEEEeCCCcccccce
Confidence 875 4999999999999999999999999999999999999999999999 99999999999999999998 899999
Q ss_pred eEEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 249 FCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 249 ~~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
|+|||||||+||||+|+++++|++.+ .+|+++++++|+|||+||||||||++||+||++|+++||||
T Consensus 468 ftpIInpPqvaILgvG~i~~~pvv~~-~~g~i~~r~~m~lsLs~DHRvIDGa~AA~FL~~lk~~LE~P 534 (539)
T PLN02744 468 FCAIINPPQSAILAVGSAEKRVIPGS-GPDQYNFASFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENP 534 (539)
T ss_pred eeccccCCcEEEEEcccceeEeEEec-cCCeEEEeeeeEEeEecchhhhCcHHHHHHHHHHHHHhcCH
Confidence 99999999999999999999998742 23489999999999999999999999999999999999998
No 8
>PLN02528 2-oxoisovalerate dehydrogenase E2 component
Probab=100.00 E-value=1.4e-71 Score=546.77 Aligned_cols=280 Identities=26% Similarity=0.369 Sum_probs=234.4
Q ss_pred CCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCc
Q 037652 31 FTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSF 110 (316)
Q Consensus 31 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (316)
.+.+||+||+||+||||||++|+|||++|||+++||++|+..........+.. ++.+. ....+...+..+ .......
T Consensus 109 ~~~asP~aR~lA~e~gvdl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~-~~~~~~~ 185 (416)
T PLN02528 109 GVLSTPAVRHLAKQYGIDLNDILGTGKDGRVLKEDVLKYAAQKGVVKDSSSAE-EATIA-EQEEFSTSVSTP-TEQSYED 185 (416)
T ss_pred CccCChHHHHHHHHhCCCHHHCCCCCCCCcEeHHHHHHHhhcccccccccccc-cccCC-ccccccccCCCc-ccccCcc
Confidence 35799999999999999999999999999999999999985321100000000 00000 000000000000 0001113
Q ss_pred eeecChHHHHHHHHHHHHHhhcCCeEEEee------------------cccCccccHHHHHHHHHHHHHhhCcccceEEe
Q 037652 111 EDLPNTQIRKAIARRLLELKQTAPHLYLSS------------------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWN 172 (316)
Q Consensus 111 ~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~------------------~~~~~kls~~~~likA~a~al~~~P~lN~~~~ 172 (316)
+.+|+++|||+||++|++|+ +|||||+.. +..|.|+||++||+||+++||++||.||++|+
T Consensus 186 ~~~~l~~~r~~ia~~m~~S~-~ip~~~~~~eid~~~l~~~r~~~~~~~~~~g~kls~~~~likA~a~aL~~~P~~Na~~~ 264 (416)
T PLN02528 186 KTIPLRGFQRAMVKTMTAAA-KVPHFHYVEEINVDALVELKASFQENNTDPTVKHTFLPFLIKSLSMALSKYPLLNSCFN 264 (416)
T ss_pred eeeccchHHHHHHHHHHhcC-cCCeEEEEEEEEhHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhCchhhEEEe
Confidence 56899999999999999997 999999876 12467999999999999999999999999998
Q ss_pred cCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCeE
Q 037652 173 VETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQFC 250 (316)
Q Consensus 173 ~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~~ 250 (316)
+++..+++++++||||||++++||++|||++++++||.+|++++++|+++ +|+|+++||+||||||||+|+||+.+|+
T Consensus 265 ~~~~~i~~~~~vnIgiAv~~~~GL~vPvi~~a~~~sl~eI~~~~~~l~~~ar~gkL~~~dl~ggTftiSNlG~~G~~~~t 344 (416)
T PLN02528 265 EETSEIRLKGSHNIGVAMATEHGLVVPNIKNVQSLSLLEITKELSRLQHLAAENKLNPEDITGGTITLSNIGAIGGKFGS 344 (416)
T ss_pred cCCceEEEeCCCCeEEEEeCCCCeEecccCCcccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCceEEEeCCccccCCceE
Confidence 76446999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred EeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 251 AIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 251 pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
|||||||+||||+|++.++|++.+ ||++++|++|+||||||||||||+++|+||++|+++||||
T Consensus 345 pIin~pq~aIlgvG~i~~~pv~~~--~g~i~~r~~m~lslt~DHRviDGa~aa~Fl~~lk~~le~P 408 (416)
T PLN02528 345 PVLNLPEVAIIALGRIQKVPRFVD--DGNVYPASIMTVTIGADHRVLDGATVARFCNEWKSYVEKP 408 (416)
T ss_pred CcccCCceEEEEcccceEEeEEeC--CCcEEEEeEEEEeEeccchhcCcHHHHHHHHHHHHHHhCH
Confidence 999999999999999999998863 3489999999999999999999999999999999999997
No 9
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form. This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model.
Probab=100.00 E-value=6.8e-71 Score=558.32 Aligned_cols=276 Identities=29% Similarity=0.453 Sum_probs=234.3
Q ss_pred CCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCcee
Q 037652 33 KISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFED 112 (316)
Q Consensus 33 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (316)
++||+||+||+||||||++|+|||++|||+++||++|+.......+... . ++....+.....+. ........+++
T Consensus 246 ~asP~aR~lA~e~gvdl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~-~~~~~~~~~~~ 320 (546)
T TIGR01348 246 HAAPAVRRLAREFGVDLSAVKGTGIKGRILREDVQRFVKEPSVRAQAAA---A-SAAGGAPGALPWPN-VDFSKFGEVEE 320 (546)
T ss_pred CCCHHHHHHHHHcCCCHhhCCCCCCCCeEeHHHHHHHhhccccccCccc---c-cccCCccccCCCcc-ccccccCccee
Confidence 6899999999999999999999999999999999999753211000000 0 00000000000000 00011112466
Q ss_pred ecChHHHHHHHHHHHHHhhcCCeEEEee------------------cccCccccHHHHHHHHHHHHHhhCcccceEEecC
Q 037652 113 LPNTQIRKAIARRLLELKQTAPHLYLSS------------------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVE 174 (316)
Q Consensus 113 ~pls~~Rk~ia~~m~~S~~~iP~~~~~~------------------~~~~~kls~~~~likA~a~al~~~P~lN~~~~~~ 174 (316)
+|+++|||+||++|++||++|||||++. ...|.|+||++||+||+++||++||.||++|+++
T Consensus 321 v~~s~~rk~ia~~m~~S~~~iPh~~~~~evdvt~l~~~r~~l~~~~~~~g~kls~~~~l~kA~~~AL~~~P~~Na~~~~~ 400 (546)
T TIGR01348 321 VDMSRIRKISGANLTRNWTMIPHVTHFDKADITEMEAFRKQQNAAVEKEGVKLTVLHILMKAVAAALKKFPKFNASLDLG 400 (546)
T ss_pred eecchHHHHHHHHHHHHhhcCCEEEEEEEEEcHHHHHHHHHHHhhhhhcCCcccHHHHHHHHHHHHHHhCChhhEEEeCC
Confidence 8999999999999999999999999876 1246799999999999999999999999999865
Q ss_pred CCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCeEEe
Q 037652 175 TEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQFCAI 252 (316)
Q Consensus 175 ~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~~pi 252 (316)
...|+++++|||||||++++||++|||||++++||.+|++++++|+++ +|+|+++||+||||||||+||||+.+|+||
T Consensus 401 ~~~i~~~~~vnigvAv~~~~GL~vPvi~~a~~~sl~~ia~~~~~l~~~ar~g~L~~~d~~ggTfTiSNlG~~G~~~~~pi 480 (546)
T TIGR01348 401 GEQLILKKYVNIGVAVDTPNGLLVPVIKDVDRKGITELALELSDLAKKARDGKLTPDEMQGACFTISSLGGIGGTAFTPI 480 (546)
T ss_pred CCEEEEeCCcCEEEEEECCCCeEECCcCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHhCCCeEEEeCCCCCCCcceECC
Confidence 446999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred ecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 253 INTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 253 i~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
|||||+|||++|+++++|++.+| +++++++|+|||+||||||||+++++||++|+++||||
T Consensus 481 in~Pq~aIl~vg~~~~~p~~~~~---~~~~~~~m~ltls~DHRviDGa~aa~Fl~~~~~~le~P 541 (546)
T TIGR01348 481 VNAPEVAILGVSKSGMEPVWNGK---EFEPRLMLPLSLSYDHRVIDGADAARFTTYICESLADI 541 (546)
T ss_pred CCCCceEEEEcccceEEeEEECC---EEEEEEEEEEeEeccchhcChHHHHHHHHHHHHHHhCH
Confidence 99999999999999999987654 89999999999999999999999999999999999998
No 10
>PRK11854 aceF pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated
Probab=100.00 E-value=5e-66 Score=531.15 Aligned_cols=280 Identities=26% Similarity=0.390 Sum_probs=234.4
Q ss_pred CCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCc
Q 037652 31 FTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSF 110 (316)
Q Consensus 31 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (316)
.+++||+||+||+||||||++|+|||++|||+++||++|+......... + +.++......+.....+. ......+..
T Consensus 327 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 403 (633)
T PRK11854 327 YVHATPLVRRLAREFGVNLAKVKGTGRKGRILKEDVQAYVKDAVKRAEA-A-PAAAAAGGGGPGLLPWPK-VDFSKFGEI 403 (633)
T ss_pred ccCCCchhHHHHHHhCCChhhcCCCCCCCeEeHHHHHHHhhcccccccc-C-Cccccccccccccccccc-ccccccCcc
Confidence 4679999999999999999999999999999999999997532110000 0 000000000000000000 000111123
Q ss_pred eeecChHHHHHHHHHHHHHhhcCCeEEEee-----------c---------ccCccccHHHHHHHHHHHHHhhCcccceE
Q 037652 111 EDLPNTQIRKAIARRLLELKQTAPHLYLSS-----------K---------KHNIKVSVNDIVIKAVAVALKNVPEANSY 170 (316)
Q Consensus 111 ~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~-----------~---------~~~~kls~~~~likA~a~al~~~P~lN~~ 170 (316)
+++||++|||+||++|.+||+++|||+++. + ..+.++|+++||+||+++||++||+||++
T Consensus 404 ~~~~l~~~r~~ia~~m~~S~~~ip~~~~~~evD~t~l~~~rk~~~~~~~~~~~g~k~t~~~~likAva~Al~~~P~~Na~ 483 (633)
T PRK11854 404 EEVELGRIQKISGANLHRNWVMIPHVTQFDKADITELEAFRKQQNAEAEKRKLGVKITPLVFIMKAVAAALEQMPRFNSS 483 (633)
T ss_pred eEEeCchHHHHHHHHHHHHHhcCCeEEEEeEEEcHHHHHHHHHHhhhhhhhcccCcccHHHHHHHHHHHHHHhCCHhhEE
Confidence 568999999999999999999999999876 1 13679999999999999999999999999
Q ss_pred EecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCC
Q 037652 171 WNVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQ 248 (316)
Q Consensus 171 ~~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~ 248 (316)
|+++.++++++++|||||||++++||++|||+++++++|.+|++++++++++ +|+|+++|++||||||||+|+||+.+
T Consensus 484 ~~~~~~~i~~~~~vnigiAV~~~~GL~vPvi~~a~~~sl~~i~~~~~~l~~~ar~~~l~~~~~~ggTftISnlG~~G~~~ 563 (633)
T PRK11854 484 LSEDGQRLTLKKYVNIGIAVDTPNGLVVPVFKDVNKKGIIELSRELMDISKKARDGKLTAGDMQGGCFTISSIGGLGTTH 563 (633)
T ss_pred EecCCCEEEEecccCEEEEEECCCceEEeeECCCccCCHHHHHHHHHHHHHHHHcCCCChHHcCCcEEEEeCCcccCCcc
Confidence 9754356999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred eEEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 249 FCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 249 ~~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
|+|||||||+|||++|++.++|++.++ .+++|++|+|||+||||+|||+++|+||++|+++||+|
T Consensus 564 ~tpii~ppq~aIlgvG~i~~~p~~~~~---~~~~r~~m~lslt~DHRviDGa~aa~Fl~~lk~~LE~p 628 (633)
T PRK11854 564 FTPIVNAPEVAILGVSKSAMEPVWNGK---EFAPRLMLPLSLSYDHRVIDGADGARFITIINDRLSDI 628 (633)
T ss_pred eeccccCCceEEEEcccceEEEEEECC---EEEEEEEEEEeEEccchhcchHHHHHHHHHHHHHHhCH
Confidence 999999999999999999999977544 79999999999999999999999999999999999997
No 11
>PRK11855 dihydrolipoamide acetyltransferase; Reviewed
Probab=100.00 E-value=2e-64 Score=512.20 Aligned_cols=279 Identities=30% Similarity=0.404 Sum_probs=232.6
Q ss_pred CCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCcee
Q 037652 33 KISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFED 112 (316)
Q Consensus 33 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (316)
.+||+||+||+||||||++|+|||++|||+++||++|+.........+.......+....+... .+. .........++
T Consensus 244 ~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~ 321 (547)
T PRK11855 244 HASPAVRRLARELGVDLSQVKGTGKKGRITKEDVQAFVKGAMSAAAAAAAAAAAAGGGGLGLLP-WPK-VDFSKFGEIET 321 (547)
T ss_pred cCChHHHHHHHHhCCCHHHCcCCCCCCcEeHHHHHHHhhccccccccccccccccccccccccC-Ccc-ccccccCcceE
Confidence 7899999999999999999999999999999999999853211100000000000000000000 000 00001112456
Q ss_pred ecChHHHHHHHHHHHHHhhcCCeEEEee------------------cccCccccHHHHHHHHHHHHHhhCcccceEEecC
Q 037652 113 LPNTQIRKAIARRLLELKQTAPHLYLSS------------------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVE 174 (316)
Q Consensus 113 ~pls~~Rk~ia~~m~~S~~~iP~~~~~~------------------~~~~~kls~~~~likA~a~al~~~P~lN~~~~~~ 174 (316)
+||++|||+||++|++||++|||||++. ++.|.++||++||+||+++||++||+||++|+++
T Consensus 322 ~~ls~~r~~ia~~m~~S~~~iP~~~~~~evd~t~l~~~r~~~~~~~~~~g~k~s~~~~likAv~~al~~~P~ln~~~~~~ 401 (547)
T PRK11855 322 KPLSRIKKISAANLHRSWVTIPHVTQFDEADITDLEALRKQLKKEAEKAGVKLTMLPFFIKAVVAALKEFPVFNASLDED 401 (547)
T ss_pred EeCcHHHHHHHHHHHHHhhcCCeEEEEEEEEChHHHHHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHhCcHhhEEEccC
Confidence 8999999999999999999999999876 1246799999999999999999999999999853
Q ss_pred CCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCeEEe
Q 037652 175 TEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQFCAI 252 (316)
Q Consensus 175 ~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~~pi 252 (316)
.+.++++++||||+||++++||++|||+|+++++|.+|++++++++++ +|+|.++|++||||||||+|+||+.+|+||
T Consensus 402 ~~~i~~~~~i~i~~Av~~~~gl~vpvi~~~~~~sl~~i~~~~~~l~~~ar~~~l~~~~~~ggtftiSnlg~~g~~~~tpi 481 (547)
T PRK11855 402 GDELTYKKYFNIGFAVDTPNGLVVPVIKDVDKKSLLEIAREIAELAKKARDGKLKPDDMQGGCFTISSLGGIGGTAFTPI 481 (547)
T ss_pred CCEEEEeCCccEEEEEECCCccEeCCcCCCccCCHHHHHHHHHHHHHHHHcCCCChHhcCCceEEEeCCccccccceecC
Confidence 346999999999999999999999999999999999999999999999 899999999999999999999999999999
Q ss_pred ecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 253 INTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 253 i~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
|||||+|||++|++.++|++.++ .+.+|++|+|||+||||+|||+++++||++|+++||+|
T Consensus 482 i~~pq~ail~~G~~~~~pv~~~~---~~~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p 542 (547)
T PRK11855 482 INAPEVAILGVGKSQMKPVWDGK---EFVPRLMLPLSLSYDHRVIDGATAARFTNYLKQLLADP 542 (547)
T ss_pred cCCCceEEEEcccceEeeeeeCC---EEEEEeEEEEeEEccchhcCcHHHHHHHHHHHHHHhCH
Confidence 99999999999999999966443 78999999999999999999999999999999999997
No 12
>PRK11856 branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed
Probab=100.00 E-value=2.2e-63 Score=489.22 Aligned_cols=265 Identities=42% Similarity=0.620 Sum_probs=231.7
Q ss_pred CCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCce
Q 037652 32 TKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSFE 111 (316)
Q Consensus 32 ~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (316)
+.+||+||+||+||||||++|+|||++|||+++||++|+.+....... ++. .+...+. . .....+
T Consensus 125 ~~asP~~r~la~~~gidl~~i~gsG~~Gri~~~Dv~~~~~~~~~~~~~--------~~~---~~~~~~~--~--~~~~~~ 189 (411)
T PRK11856 125 AKASPAVRKLARELGVDLSTVKGSGPGGRITKEDVEAAAAAAAPAAAA--------AAA---AAAAPPA--A--AAEGEE 189 (411)
T ss_pred ccCChHHHHHHHHcCCCHHHCcCCCCCCeEEHHHHHHHHhcccccCCC--------CCC---CCCCCCc--c--cCCCce
Confidence 468999999999999999999999999999999999998532110000 000 0000000 0 011256
Q ss_pred eecChHHHHHHHHHHHHHhhcCCeEEEee-----------c---ccCccccHHHHHHHHHHHHHhhCcccceEEecCCCc
Q 037652 112 DLPNTQIRKAIARRLLELKQTAPHLYLSS-----------K---KHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEE 177 (316)
Q Consensus 112 ~~pls~~Rk~ia~~m~~S~~~iP~~~~~~-----------~---~~~~kls~~~~likA~a~al~~~P~lN~~~~~~~~~ 177 (316)
.+|++++||.||++|.+||+++||++++. + ..+.++||++|++||+++||++||+||++|+++.
T Consensus 190 ~~~~~~~r~~ia~~m~~s~~~~P~~~~~~~idvt~l~~~~k~~~~~~~~ls~~~~~ikav~~Al~~~P~~n~~~~~~~-- 267 (411)
T PRK11856 190 RVPLSGMRKAIAKRMVESKREIPHFTLTDEVDVTALLALRKQLKAIGVKLTVTDFLIKAVALALKKFPELNASWDDDA-- 267 (411)
T ss_pred EeeCcHHHHHHHHHHHHHhhcCCeEEEEEEEEhHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHhCcHhheEEeCCE--
Confidence 78999999999999999999999999876 1 1225899999999999999999999999998764
Q ss_pred EEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCeEEeecC
Q 037652 178 IVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQFCAIINT 255 (316)
Q Consensus 178 i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~~pii~~ 255 (316)
++++++||||+||++++||++|||+++++++|.+|++++++++++ +|+|+++|++||||||||+|++|..+|+||||+
T Consensus 268 i~~~~~i~i~~av~~~~gl~~pvi~~~~~~sl~ei~~~~~~~~~~ar~~~l~~~~~~~gtftiSn~G~~g~~~~~Pii~~ 347 (411)
T PRK11856 268 IVLKKYVNIGIAVATDGGLIVPVIRDADKKSLFELAREIKDLAEKAREGKLKPEELQGGTFTISNLGMFGGDYFTPIINP 347 (411)
T ss_pred EEEcCCcCEEEEEECCCCeEeCcCCCcccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCCeEEEeCCCccCCCceECccCC
Confidence 999999999999999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred CCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 256 PLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 256 p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
||+|||++|++.++|++.+| +++++.+|+|||+||||++||+++++||+.|+++||+|
T Consensus 348 p~~ail~iG~~~~~~~~~~g---~~~~~~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p 405 (411)
T PRK11856 348 PEVAILGVGAIVERPVVVDG---EIVVRKVMPLSLSFDHRVIDGADAARFLKALKELLENP 405 (411)
T ss_pred CceEEEEcccceEEEEEECC---EEEEEEEEEEeEEeehhhcCcHHHHHHHHHHHHHHhCH
Confidence 99999999999999988654 89999999999999999999999999999999999997
No 13
>KOG0557 consensus Dihydrolipoamide acetyltransferase [Energy production and conversion]
Probab=100.00 E-value=9.5e-64 Score=481.92 Aligned_cols=275 Identities=46% Similarity=0.674 Sum_probs=240.2
Q ss_pred CCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCc
Q 037652 31 FTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDSF 110 (316)
Q Consensus 31 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (316)
++.+||++|+||.|+|+|+++|.||||+|||++.||++|+...+....... .+ +.++.+++.+. .....|
T Consensus 173 r~~asP~Ak~la~e~~l~ls~i~gtGP~Gri~k~Di~~~v~~~~~k~~~~~--~~-------~~~~~~~~a~~-~~~~~~ 242 (470)
T KOG0557|consen 173 RVFASPLAKKLAEEKGLELSSIPGTGPHGRILKGDIEKHVGSGKKKSAKAP--KA-------SAPPPAPAAPP-VSLPGY 242 (470)
T ss_pred ceecChHHHHHHHHhCCccccCcCcCCCceeehhhHHHhhcccccccccCC--Cc-------cCCCcCccCCc-CCCCcc
Confidence 778999999999999999999999999999999999999986532111100 00 00000011011 112238
Q ss_pred eeecChHHHHHHHHHHHHHhhcCCeEEEee----------------cccCccccHHHHHHHHHHHHHhhCcccceEEecC
Q 037652 111 EDLPNTQIRKAIARRLLELKQTAPHLYLSS----------------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVE 174 (316)
Q Consensus 111 ~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~----------------~~~~~kls~~~~likA~a~al~~~P~lN~~~~~~ 174 (316)
+++|++.||+.|+++|.+|+++|||+|++. ++.+.++|+++||+||.+.||+++|++|++|+++
T Consensus 243 ~diP~s~mr~viakrl~eSk~~IPh~yvt~~~~~d~ll~~r~~ln~~~~~~~vsvndliiKAaa~al~~vPevNs~w~~~ 322 (470)
T KOG0557|consen 243 EDIPVSNMRRVIAKRLLESKQTIPHYYVTVDVNLDKLLALREKLNFEKSIKKVSLNDLIAKAAALALAKVPEVNSSWMDE 322 (470)
T ss_pred cccccchhhhhhhhhhhhhhcCCCeEEEeeeeehHHHHHHHHHhhhcccCcccchhHHHHHHHHHHHhcCCcccceecCC
Confidence 999999999999999999999999999876 2457899999999999999999999999999986
Q ss_pred CCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCeEEe
Q 037652 175 TEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQFCAI 252 (316)
Q Consensus 175 ~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~~pi 252 (316)
..|+++++|||++||++++||++|+|+|++.+.|.+|.+++++|+.+ .|+|.|+|++|||||||||||||++.|+.|
T Consensus 323 -~~i~~~~~VdisvAVat~~GLitPii~na~~kgl~~is~~vkel~~kAr~~kL~Pee~qgGtftiSNLGmf~V~~F~Ai 401 (470)
T KOG0557|consen 323 -LVIRQLSSVDISVAVATPNGLITPIIQNADAKGLSTISSKVKELAQKAREGKLQPEEFQGGTFTLSNLGMFGVDMFTAI 401 (470)
T ss_pred -ccccccCcCChhheeeccCcccchhhhhcccccHHHHHHHHHHHHHHHhhccCCcccccCCceeHhhccCcCccccccc
Confidence 46999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred ecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 253 INTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 253 i~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
|||||.|||++|..++..++..+.++++.....|++||++|||++||+.+++||+.|+++||||
T Consensus 402 inPpq~~ILavg~~~~~~v~d~~~~~~~~~~~~m~VTls~DhRvvdga~aa~Fl~~fk~~~EnP 465 (470)
T KOG0557|consen 402 INPPQADILAVGAATPSVVPDANGPEKFSVINAMTVTLSADHRVVDGAVAARFLDEFKENLENP 465 (470)
T ss_pred cCCchhhhhhcccCccccccCCCcccccceeeeeEEEEecCcceecHHHHHHHHHHHHHHhhCH
Confidence 9999999999999998876533345689999999999999999999999999999999999998
No 14
>COG0508 AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion]
Probab=100.00 E-value=5.4e-63 Score=484.22 Aligned_cols=268 Identities=41% Similarity=0.593 Sum_probs=236.9
Q ss_pred CCCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhcccCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCC
Q 037652 30 SFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKASSRSSSHTEKTSPSFHPQTSPAVSQGSNLELSDS 109 (316)
Q Consensus 30 ~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (316)
....+||++|++|+|+||||+++.|||++|||+++|+++++...... .. .+.. ..+. + . .....
T Consensus 111 ~~~~asP~~r~la~e~gidl~~v~gtG~~gri~~~d~~~~~~~~~~~--~~------~~~~--~~~~--~--~--~~~~~ 174 (404)
T COG0508 111 GRVLASPAVRRLAREAGIDLSKVKGTGPGGRITKKDVEAAVAEKAAA--AA------APAP--AAAA--P--A--SAAGE 174 (404)
T ss_pred cccccCcchhhhhhhcCCCHHHcCCcCCCCceeccchhhhccccccc--cc------cccc--ccCC--c--c--cccCC
Confidence 45779999999999999999999999999999999999997654110 00 0000 0000 0 0 12234
Q ss_pred ceeecChHHHHHHHHHHHHHhhcCCeEEEee------------------cccCccccHHHHHHHHHHHHHhhCcccceEE
Q 037652 110 FEDLPNTQIRKAIARRLLELKQTAPHLYLSS------------------KKHNIKVSVNDIVIKAVAVALKNVPEANSYW 171 (316)
Q Consensus 110 ~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~------------------~~~~~kls~~~~likA~a~al~~~P~lN~~~ 171 (316)
++++|++++||.|+++|.+|++++||+|.+. .+++.|+||++|++||++.||++||.+|++|
T Consensus 175 ~~~~~~~~~rk~ia~~m~~s~~~~p~~t~~~evd~t~l~~lr~~~~~~~~~~g~klt~~~f~~kA~~~Alk~~P~~Na~~ 254 (404)
T COG0508 175 EERVPMSRIRKAIAERMVESKQTIPHLTLFNEVDMTKLMALRKKLKEEFEKKGVKLTFLSFLVKAVVKALKKFPEVNASI 254 (404)
T ss_pred ceeeecccHHHHHHHHHHHHHhhCCeEEEEeeecHHHHHHHHHHhhhhhcccCccccHHHHHHHHHHHHHHhCCccceee
Confidence 7889999999999999999999999999876 1128899999999999999999999999888
Q ss_pred ecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCe
Q 037652 172 NVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQF 249 (316)
Q Consensus 172 ~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~ 249 (316)
+++...+++++++|||+||++++||++||||||++++|.+|+.++.+|+.+ +|+|+++||+||||||||+|+||...|
T Consensus 255 ~~~~~~iv~~~~~~igiAv~t~~GLvvpVir~a~~~~~~~i~~~i~~la~~aR~~kl~~~e~~ggtftisn~G~~g~~~~ 334 (404)
T COG0508 255 DGDGEEIVYHKYVNIGIAVDTPRGLVVPVIRDADKKSLAEIAKEIKDLAKKARDGKLTPEEMQGGTFTISNLGMFGSLMF 334 (404)
T ss_pred ccccceEEEeccccEEEEEecCCCeEecceeecccCCHHHHHHHHHHHHHHHHhcCcCHHHhCCceEEeecCCcccccee
Confidence 864115999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred EEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 250 CAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 250 ~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
+||||+||+|||++|++.++|++.++ ++++|++|+|+||||||++||+++++||.++|++||+|
T Consensus 335 tpiin~Pq~aILgv~~~~~rpv~~~~---~i~~~~mm~lsls~DHRviDGa~aa~Fl~~ik~~le~p 398 (404)
T COG0508 335 TPIINPPQVAILGVGAIEERPVVVGG---EIVVRPMMYLSLSYDHRVIDGAEAARFLVALKELLEDP 398 (404)
T ss_pred cccccChhHheeeccccccCceEecC---ceeeEeeEeecccccccccccHHHHHHHHHHHHHhcCh
Confidence 99999999999999999999988765 89999999999999999999999999999999999997
No 15
>PF00198 2-oxoacid_dh: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); InterPro: IPR001078 This domain is found in the lipoamide acyltransferase component of the branched-chain alpha-keto acid dehydrogenase complex 2.3.1 from EC, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide []. It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). The domain is also found in the dihydrolipoamide succinyltransferase component of the 2-oxoglutarate dehydrogenase complex 2.3.1.61 from EC. These proteins contain one to three copies of a lipoyl binding domain followed by the catalytic domain.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1EAF_A 1EAA_A 1DPD_A 1EAE_A 1DPC_A 1EAB_A 1DPB_A 1EAC_A 1EAD_A 2II5_H ....
Probab=100.00 E-value=5.4e-62 Score=445.41 Aligned_cols=204 Identities=44% Similarity=0.686 Sum_probs=178.9
Q ss_pred CceeecChHHHHHHHHHHHHHhhcCCeEEEee------------------cccCccccHHHHHHHHHHHHHhhCcccceE
Q 037652 109 SFEDLPNTQIRKAIARRLLELKQTAPHLYLSS------------------KKHNIKVSVNDIVIKAVAVALKNVPEANSY 170 (316)
Q Consensus 109 ~~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~------------------~~~~~kls~~~~likA~a~al~~~P~lN~~ 170 (316)
+++++|++++||+||++|++|++++||+|+.. ...+.++|+++|++||+++||++||.||++
T Consensus 3 ~~~~~~ls~~r~~ia~~m~~S~~~iP~~~~~~evd~t~l~~~r~~l~~~~~~~~~kis~~~~likAva~AL~~~P~lNa~ 82 (231)
T PF00198_consen 3 EETRVPLSGMRKAIAKRMTESLQTIPHFTLSREVDVTALLALRKELKEAGEEPGGKISITDFLIKAVALALKEHPELNAS 82 (231)
T ss_dssp SCEEEES-HHHHHHHHHHHHHHHHS-EEEEEEEEETHHHHHHHHHHHHHHHHTTST-THHHHHHHHHHHHHHHSGGGSEE
T ss_pred CcEEEECcHHHHHHHHHHHHHHhcCCeEEEEEEEEHHHHHHHHHHhhhHHHhhccCCChhHeeeehHhhhhHHHHHhccc
Confidence 46889999999999999999999999999987 113459999999999999999999999999
Q ss_pred EecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCC
Q 037652 171 WNVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQ 248 (316)
Q Consensus 171 ~~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~ 248 (316)
|+++. +|++++++||||||++++||++|||+|++++|+.||++++++++++ +|+|+++|++||||||||+|+||+++
T Consensus 83 ~~~~~-~i~~~~~vnIgvAV~~~~GL~vPVIr~a~~~sl~eIa~e~~~l~~~ar~g~l~~~d~~g~TftisNlG~~g~~~ 161 (231)
T PF00198_consen 83 WDGDG-EIVLYERVNIGVAVDTPDGLVVPVIRDADKKSLAEIAKELRDLAERAREGKLTPEDLQGGTFTISNLGMFGVES 161 (231)
T ss_dssp EETTS-EEEEESS--EEEEEEETTEEEEEEETTGGGS-HHHHHHHHHHHHHHHHTT---GGGGSS-SEEEEEGGGTT-SC
T ss_pred ccccc-ceeeeeeEEEEEEEEcCCCEEEEEEeCCccccHHHHHHHHhhhhccchhhhhhhhhhhccceeeeecCCCCcce
Confidence 99875 7999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred eEEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 249 FCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 249 ~~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
|+|||||||+|||++|+++++|++.+| +++++++|+||||||||++||++|++||++|+++||+|
T Consensus 162 ~~pii~~pq~ail~vG~i~~~p~~~~~---~~~~~~~~~lslt~DHRvidG~~aa~Fl~~l~~~le~p 226 (231)
T PF00198_consen 162 FTPIINPPQVAILGVGAIRDRPVVEDG---EVVVRPVMNLSLTFDHRVIDGAEAARFLKDLKELLENP 226 (231)
T ss_dssp EE----TTSSEEEEEEEEEEEEEEETT---CEEEEEEEEEEEEEETTTS-HHHHHHHHHHHHHHHHST
T ss_pred eEccCCcccceEEEecceEEEEEEEec---cceeeEEEEeEEeccceEEcHHHHHHHHHHHHHHHhCH
Confidence 999999999999999999999999665 89999999999999999999999999999999999998
No 16
>KOG0558 consensus Dihydrolipoamide transacylase (alpha-keto acid dehydrogenase E2 subunit) [Energy production and conversion]
Probab=100.00 E-value=3.4e-61 Score=447.96 Aligned_cols=277 Identities=27% Similarity=0.385 Sum_probs=237.1
Q ss_pred CCCCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhhccc--CCCCCCCCCCCCCCCCCCCCCcCCCCCCCC
Q 037652 29 RSFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSEKAS--SRSSSHTEKTSPSFHPQTSPAVSQGSNLEL 106 (316)
Q Consensus 29 ~~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (316)
.-+..++|++||||.|+||||+.|+|||.+|||.|+||++|+.+.... .+.+.. .+..+.+.|.....+.
T Consensus 168 ~~~tlaTPaVRrlA~e~~idla~v~gtGKdGRvLKeDvL~fl~q~pg~~~~~~~~~--------~a~~~~~~ps~~a~~~ 239 (474)
T KOG0558|consen 168 LLKTLATPAVRRLAKENGIDLAEVTGTGKDGRVLKEDVLRFLGQVPGFVTDPSPSE--------HAVIPGPSPSTKASSN 239 (474)
T ss_pred ccccccCHHHHHHHHHhCCceEeeeccCCCCcchHHHHHHHhccCCCCccCCCCce--------eecCCCCCCcccccCc
Confidence 356669999999999999999999999999999999999999764211 011000 0000000011000011
Q ss_pred CCCceeecChHHHHHHHHHHHHHhhcCCeEEEee------------------cccCccccHHHHHHHHHHHHHhhCcccc
Q 037652 107 SDSFEDLPNTQIRKAIARRLLELKQTAPHLYLSS------------------KKHNIKVSVNDIVIKAVAVALKNVPEAN 168 (316)
Q Consensus 107 ~~~~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~------------------~~~~~kls~~~~likA~a~al~~~P~lN 168 (316)
-...+.+|+.+.+|+|.+.|+++ ..||||.+.+ .+.++|+||++|+|||++.||.+||.+|
T Consensus 240 ~~~Dkt~plrGf~rAMvKtMt~a-lkiPHF~y~dEIn~~sLvklr~elk~~a~e~~IKltfmPf~iKaaSlaL~kyP~vN 318 (474)
T KOG0558|consen 240 LEADKTVPLRGFSRAMVKTMTEA-LKIPHFGYVDEINCDSLVKLRQELKENAKERGIKLTFMPFFIKAASLALLKYPIVN 318 (474)
T ss_pred ccccceeechhHHHHHHHHHHHH-hcCCccccccccChHHHHHHHHHHhhhhhhcCceeeehHHHHHHHHHHHhhCcccc
Confidence 11256789999999999999999 5899998765 4578999999999999999999999999
Q ss_pred eEEecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCC
Q 037652 169 SYWNVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPV 246 (316)
Q Consensus 169 ~~~~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~ 246 (316)
++++.+...|++..+.|||+|++++.||+||-|+|++.+|+.||++++++|.+. .|+|+++|+.|||||+||+|.+|+
T Consensus 319 ss~d~~~e~ii~K~sHNIgvAmdT~~GLvVPNiKN~q~~si~eIakeLnrLq~~g~~~qls~~D~t~GTftLSNIG~IGG 398 (474)
T KOG0558|consen 319 SSFDEESENIILKGSHNIGVAMDTEQGLVVPNIKNVQSLSIFEIAKELNRLQELGANGQLSPEDLTGGTFTLSNIGAIGG 398 (474)
T ss_pred chhhhhhhhhhhhcccceeEEecCCCceeccCccccchhhHHHHHHHHHHHHHhhhcCCcChhhccCceEEeeecccccc
Confidence 999987667999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred CCeEEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 247 DQFCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 247 ~~~~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
++..|+|++||+||.++|+|++.|... ..|++....+|.++|+.||||+||+..|||-+.+|+|||||
T Consensus 399 tf~~P~i~~PeVAIgAlGrie~vPrFn--kk~~V~~a~IM~VswsADHRViDGaTmarFsn~WK~YlE~P 466 (474)
T KOG0558|consen 399 TFASPVIMPPEVAIGALGRIEKVPRFN--KKGEVYPASIMMVSWSADHRVIDGATMARFSNQWKEYLENP 466 (474)
T ss_pred cccCcccccchhhhhhccccccccccC--CCCCEEEeEEEEEEeecCceeeccHHHHHHHHHHHHHhhCH
Confidence 999999999999999999999876543 34688999999999999999999999999999999999998
No 17
>PLN02226 2-oxoglutarate dehydrogenase E2 component
Probab=100.00 E-value=1.3e-60 Score=469.93 Aligned_cols=202 Identities=31% Similarity=0.440 Sum_probs=192.9
Q ss_pred ceeecChHHHHHHHHHHHHHhhcCCeEEEee--------------c-----ccCccccHHHHHHHHHHHHHhhCcccceE
Q 037652 110 FEDLPNTQIRKAIARRLLELKQTAPHLYLSS--------------K-----KHNIKVSVNDIVIKAVAVALKNVPEANSY 170 (316)
Q Consensus 110 ~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~--------------~-----~~~~kls~~~~likA~a~al~~~P~lN~~ 170 (316)
.+.+|+++|||+||++|++||++|||||++. + +.+.|+||++||+||+++||++||.+|++
T Consensus 234 ~~~ipls~~Rk~IA~~M~~S~~tiPh~t~~~evDvt~L~~lR~~l~~~~~~~~g~klS~~~~liKAva~AL~~~P~lNa~ 313 (463)
T PLN02226 234 ERRVPMTRLRKRVATRLKDSQNTFALLTTFNEVDMTNLMKLRSQYKDAFYEKHGVKLGLMSGFIKAAVSALQHQPVVNAV 313 (463)
T ss_pred ceeeeChHHHHHHHHHHHHHHhcCCEEEEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhCCHhheE
Confidence 3568999999999999999999999999976 1 23779999999999999999999999999
Q ss_pred EecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCC
Q 037652 171 WNVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQ 248 (316)
Q Consensus 171 ~~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~ 248 (316)
|+++ .|+++++|||||||++++||+||||||+|+++|.||++++++|+++ +|+|+++||+||||||||+|+||+.+
T Consensus 314 ~~~~--~i~~~~~vnIGvAV~t~~GLvVPVIr~ad~~sl~eIa~ei~~L~~kAR~gkL~~~dl~GGTfTISNlG~~Gv~~ 391 (463)
T PLN02226 314 IDGD--DIIYRDYVDISIAVGTSKGLVVPVIRGADKMNFAEIEKTINGLAKKANEGTISIDEMAGGSFTVSNGGVYGSLI 391 (463)
T ss_pred EcCC--EEEEeCcccEEEEEECCCCEEeccCCCcccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCCeEEEECCCcccccc
Confidence 9875 4999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred eEEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 249 FCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 249 ~~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
|+|||||||+||||+|+++++|++.+| ++++|++|+|||+||||||||+++|+||++|+++||+|
T Consensus 392 ftPIInpPqvAILgvG~i~~~pvv~~g---~i~~r~~m~lsLs~DHRVIDGa~aA~FL~~lk~~LE~P 456 (463)
T PLN02226 392 STPIINPPQSAILGMHSIVSRPMVVGG---SVVPRPMMYVALTYDHRLIDGREAVYFLRRVKDVVEDP 456 (463)
T ss_pred eeccccCCcEEEEEcccceEEEEEECC---EEEEEeEEEEeEecchhhhCcHHHHHHHHHHHHHhcCH
Confidence 999999999999999999999998765 89999999999999999999999999999999999997
No 18
>PTZ00144 dihydrolipoamide succinyltransferase; Provisional
Probab=100.00 E-value=4.4e-60 Score=462.91 Aligned_cols=201 Identities=34% Similarity=0.496 Sum_probs=192.1
Q ss_pred eeecChHHHHHHHHHHHHHhhcCCeEEEee--------------c-----ccCccccHHHHHHHHHHHHHhhCcccceEE
Q 037652 111 EDLPNTQIRKAIARRLLELKQTAPHLYLSS--------------K-----KHNIKVSVNDIVIKAVAVALKNVPEANSYW 171 (316)
Q Consensus 111 ~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~--------------~-----~~~~kls~~~~likA~a~al~~~P~lN~~~ 171 (316)
+.+|+++|||+||++|++||++|||||++. + +.|.|+||++||+||+++||++||.+|++|
T Consensus 190 ~~ipls~~Rk~IA~~M~~S~~~iPh~t~~~eid~t~l~~~r~~~~~~~~~~~g~klS~~~~liKAva~AL~~~P~~Na~~ 269 (418)
T PTZ00144 190 TRVPMSRMRQRIAERLKASQNTCAMLTTFNECDMSALMELRKEYKDDFQKKHGVKLGFMSAFVKASTIALKKMPIVNAYI 269 (418)
T ss_pred eeeeCcHHHHHHHHHHHHHHhhCCeEEEEEEEechHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChHhheEE
Confidence 457999999999999999999999999876 1 137799999999999999999999999999
Q ss_pred ecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCCe
Q 037652 172 NVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQF 249 (316)
Q Consensus 172 ~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~~ 249 (316)
+++ ++++++++||||||++++||+||||+|+|+++|.||++++++|+++ +|+|+++||+||||||||+|++|+.+|
T Consensus 270 ~~~--~i~~~~~vnIgvAV~~~~GL~vPVI~~ad~~sl~eIa~ei~~L~~~ar~g~L~~~e~~GgTfTISNlG~~G~~~~ 347 (418)
T PTZ00144 270 DGD--EIVYRNYVDISVAVATPTGLVVPVIRNCENKSFAEIEKELADLAEKARNNKLTLEDMTGGTFTISNGGVFGSLMG 347 (418)
T ss_pred cCC--EEEEecCCCEEEEEECCCCEEEccCCCcccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCceEEEECCCCCCccee
Confidence 875 4999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred EEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 250 CAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 250 ~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
+|||||||+||||+|+++++|++.+| ++++|++|+|||+|||||+||++||+||++|+++||+|
T Consensus 348 tpIInpPq~aILgvG~i~~~pvv~~g---~i~~r~~m~lsLs~DHRviDGa~AA~FL~~lk~~LE~P 411 (418)
T PTZ00144 348 TPIINPPQSAILGMHAIKKRPVVVGN---EIVIRPIMYLALTYDHRLIDGRDAVTFLKKIKDLIEDP 411 (418)
T ss_pred eeeecCCceEEEecccceeEeEEECC---EEEEEeEEEEEEecchhhhChHHHHHHHHHHHHHhcCH
Confidence 99999999999999999999998765 89999999999999999999999999999999999997
No 19
>KOG0559 consensus Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit) [Energy production and conversion]
Probab=100.00 E-value=8e-52 Score=386.86 Aligned_cols=202 Identities=33% Similarity=0.435 Sum_probs=193.3
Q ss_pred ceeecChHHHHHHHHHHHHHhhcCCeEEEee-------------------cccCccccHHHHHHHHHHHHHhhCcccceE
Q 037652 110 FEDLPNTQIRKAIARRLLELKQTAPHLYLSS-------------------KKHNIKVSVNDIVIKAVAVALKNVPEANSY 170 (316)
Q Consensus 110 ~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~-------------------~~~~~kls~~~~likA~a~al~~~P~lN~~ 170 (316)
..++++.+||+.||+++.+|..+....|.+. +++|.|+.|+.+|+||++.||++-|.+|+.
T Consensus 228 E~RVkMnRmR~RIA~RLKdsQNt~A~LTTFNEvDMS~lm~mRk~ykdaf~kKhGvKlGfMs~F~KA~~~Alq~qPvVNav 307 (457)
T KOG0559|consen 228 ERRVKMNRMRLRIAERLKDSQNTAAMLTTFNEVDMSNLMEMRKQYKDAFLKKHGVKLGFMSGFSKAAAYALQDQPVVNAV 307 (457)
T ss_pred hhhhhhHHHHHHHHHHHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhCceeeehhHHHHHHHHHhhhCcceeee
Confidence 5778999999999999999976666665543 678999999999999999999999999999
Q ss_pred EecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecCCCCCCCC
Q 037652 171 WNVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNLGMFPVDQ 248 (316)
Q Consensus 171 ~~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnlG~~G~~~ 248 (316)
+++++ |+|++++||+|||+|+.||+||||||++.+++.||-.+|..|..| +|+|+-+||.||||||||-|.||..+
T Consensus 308 Idg~~--iVYRDyvDISvAVaTpkGLVvPViRnae~Mn~adIE~~i~~L~~KAr~g~laiedM~gGTFTISNGGVfGSL~ 385 (457)
T KOG0559|consen 308 IDGDD--IVYRDYVDISVAVATPKGLVVPVIRNAESMNFADIEKTIAGLGKKARDGKLAIEDMAGGTFTISNGGVFGSLY 385 (457)
T ss_pred ecCCe--eEEeecceeEEEeecCCceeeeeecccccccHHHHHHHHHHHHHhhccCceeeeeccCceEEEeCCcEeeeec
Confidence 99986 999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred eEEeecCCCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 249 FCAIINTPLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 249 ~~pii~~p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
.||||||||+||||+..|.+||++++| ++++|+||++.||||||+|||.+|.-||+++|+++|||
T Consensus 386 gTPIINpPQsAILGmHgI~eRPv~v~G---~Vv~RPMMYvALTYDHRliDGREAVtFLr~iK~~VEDP 450 (457)
T KOG0559|consen 386 GTPIINPPQSAILGMHGIKERPVVVGG---QVVPRPMMYVALTYDHRLIDGREAVTFLRKIKEAVEDP 450 (457)
T ss_pred cCcccCCchhhhhhcccccccceeeCC---EeeeccceEEEeeccccccccHHHHHHHHHHHHHhhCH
Confidence 999999999999999999999999987 99999999999999999999999999999999999998
No 20
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=100.00 E-value=1.3e-50 Score=416.78 Aligned_cols=204 Identities=21% Similarity=0.273 Sum_probs=188.1
Q ss_pred ceeecChHHHHHHHHHHHHHhhcCCeEEEee-------------------cccCccccHHHHHHHHHHHHHhhCcccceE
Q 037652 110 FEDLPNTQIRKAIARRLLELKQTAPHLYLSS-------------------KKHNIKVSVNDIVIKAVAVALKNVPEANSY 170 (316)
Q Consensus 110 ~~~~pls~~Rk~ia~~m~~S~~~iP~~~~~~-------------------~~~~~kls~~~~likA~a~al~~~P~lN~~ 170 (316)
.+..||++++++||++|..|+ ++|++|..+ +..|.|+||++||+||+++||++||.+|++
T Consensus 115 ~~~~~LrG~a~aiAkNM~aSL-~vPtaTsvr~Ip~k~L~dnR~~In~~l~r~~GgKVSFThlI~kAvv~AL~~~P~mNas 193 (1228)
T PRK12270 115 DEVTPLRGAAAAVAKNMDASL-EVPTATSVRAVPAKLLIDNRIVINNHLKRTRGGKVSFTHLIGYALVQALKAFPNMNRH 193 (1228)
T ss_pred cceeecccHHHHHHHHHHhhh-ccCceeeeecccHHHHHHHHHHHHHHhhhccCCcccHHHHHHHHHHHHHHhCchhhce
Confidence 467899999999999999996 699999876 356899999999999999999999999999
Q ss_pred Eec--CCCcEEEcCceeEEEEEEcC-----CCeeeeEEecCCCCCHHHHHHHHHHHHHH--hCCCCCCccCCCcEEEecC
Q 037652 171 WNV--ETEEIVLFDAIDISIAVATE-----KGLMTPIVRNADQKSISAISMEVKELAER--AGKLAPHEFQGGTFSISNL 241 (316)
Q Consensus 171 ~~~--~~~~i~~~~~vnigiAV~~~-----~GL~vpVI~~a~~~sl~eIa~~i~~l~~~--~g~L~~~d~~ggTftISnl 241 (316)
|++ +++.++++++|||||||+++ +||+||+||+|++|+|.+|..++++|+.| +|||+++||+||||||||+
T Consensus 194 y~~~DGKp~iv~~~~VNlGiAVdl~~~dGsRgLVVPvIK~Ad~l~f~ef~~ay~dLV~KAR~gKLt~eD~~GgTFTISN~ 273 (1228)
T PRK12270 194 YAEVDGKPTLVTPAHVNLGLAIDLPKKDGSRQLVVPAIKGAETMDFAQFWAAYEDIVRRARDGKLTADDFQGTTISLTNP 273 (1228)
T ss_pred eeccCCCceeeccCCcceEEEEecCCCCCCcceeeccccccccCCHHHHHHHHHHHHHHHHcCCCCHHHhCCceEEEecC
Confidence 984 33459999999999999998 58999999999999999999999999999 9999999999999999999
Q ss_pred CCCCCCCeEEeecCCCeEEEEeccceeEEEEecC---CCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhc
Q 037652 242 GMFPVDQFCAIINTPLAGILVVGRGNQVVELVIG---RNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFR 314 (316)
Q Consensus 242 G~~G~~~~~pii~~p~~aIL~vG~i~~~p~~~~g---~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le 314 (316)
||||+.+|+||||+||+||||+|++...+++... .++++.++++|+||+|||||||||+++++||++|+++||
T Consensus 274 G~iGt~~ftPILnppQ~AILGVGAi~~p~~f~gas~~~l~~i~i~kvMtLTlTyDHRVIdGA~sg~FL~~ik~lLe 349 (1228)
T PRK12270 274 GGIGTVHSVPRLMKGQGAIIGVGAMEYPAEFQGASEERLAELGISKVMTLTSTYDHRIIQGAESGEFLRTIHQLLL 349 (1228)
T ss_pred CcccccceeeeecCCceEEEeccccccCceecCcccccccccceeeeEEeeeeccceeeccHhHHHHHHHHHHHHh
Confidence 9999999999999999999999999976665321 235799999999999999999999999999999999998
No 21
>PF00302 CAT: Chloramphenicol acetyltransferase; InterPro: IPR001707 Chloramphenicol acetyltransferase (CAT) (2.3.1.28 from EC) [] catalyzes the acetyl-CoA dependent acetylation of chloramphenicol (Cm), an antibiotic which inhibits prokaryotic peptidyltransferase activity. Acetylation of Cm by CAT inactivates the antibiotic. A histidine residue, located in the C-terminal section of the enzyme, plays a central role in its catalytic mechanism. There is a second family of CAT [], evolutionary unrelated to the main family described above. These CAT belong to the bacterial hexapeptide-repeat containing-transferases family (see IPR001451 from INTERPRO). The crystal structure of the type III enzyme from Escherichia coli with chloramphenicol bound has been determined. CAT is a trimer of identical subunits (monomer Mr 25,000) and the trimeric structure is stabilised by a number of hydrogen bonds, some of which result in the extension of a beta-sheet across the subunit interface. Chloramphenicol binds in a deep pocket located at the boundary between adjacent subunits of the trimer, such that the majority of residues forming the binding pocket belong to one subunit while the catalytically essential histidine belongs to the adjacent subunit. His195 is appropriately positioned to act as a general base catalyst in the reaction, and the required tautomeric stabilisation is provided by an unusual interaction with a main-chain carbonyl oxygen [].; GO: 0008811 chloramphenicol O-acetyltransferase activity; PDB: 1CIA_A 4CLA_A 1QCA_A 2CLA_A 1CLA_A 3CLA_A 3U9F_K 1PD5_F 1Q23_F 3U9B_F ....
Probab=99.66 E-value=7.6e-15 Score=132.29 Aligned_cols=167 Identities=18% Similarity=0.170 Sum_probs=122.0
Q ss_pred cCCeEEEee---------cccCccccHHHHHHHHHHHHHhhCcccceEEecCCCcEEEcCceeEEEEEEcCCCeeeeEEe
Q 037652 132 TAPHLYLSS---------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLMTPIVR 202 (316)
Q Consensus 132 ~iP~~~~~~---------~~~~~kls~~~~likA~a~al~~~P~lN~~~~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~ 202 (316)
.-|.+.++. ..+..+++++..+++++++|++++|+|+.++.++ |++++++.++.+.+|..+++-.+-.+.
T Consensus 24 ~~p~~svT~~lDvT~l~~~~K~~~~~Ff~~~ly~i~ka~N~~~efR~ri~~~-g~v~~~d~i~ps~Tv~~~~~~tFs~~~ 102 (206)
T PF00302_consen 24 DNPYFSVTVNLDVTNLYKYAKEKGLSFFPAYLYAIMKAANEIPEFRYRIVDD-GEVVYYDRIDPSYTVFHKDDETFSFCW 102 (206)
T ss_dssp SBEEEEEEEEEE-HHHHHHHHHTT--HHHHHHHHHHHHHTTSGGGCEEEETT-SCEEEESS-EEEEEEEETTTTEEEEEE
T ss_pred CCceEecceeEEhHHHHHHHHHcCCCcHHHHHHHHHHHHhcCHHHheeeeCC-CcEEEECCcceeeeEEeCCCCeEEEEE
Confidence 457776655 1233479999999999999999999999999887 469999999999999976543555666
Q ss_pred cCCCCCHHHHHHHHHHHHHH---hCCCCCCc-cCCCcEEEecCCCCCCCCeE-EeecCCC--eEEEEeccceeEEEEecC
Q 037652 203 NADQKSISAISMEVKELAER---AGKLAPHE-FQGGTFSISNLGMFPVDQFC-AIINTPL--AGILVVGRGNQVVELVIG 275 (316)
Q Consensus 203 ~a~~~sl~eIa~~i~~l~~~---~g~L~~~d-~~ggTftISnlG~~G~~~~~-pii~~p~--~aIL~vG~i~~~p~~~~g 275 (316)
-....++.++.+...+..++ ++.+.++. .....|.+|++.-+.-+.++ ++-+.+. .-++..|++.++ +|
T Consensus 103 ~~y~~df~~F~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~S~lPW~~FTs~~~~~~~~~~~~~P~it~GK~~~~----~g 178 (206)
T PF00302_consen 103 TEYDEDFEEFYANYEADIERYKESKGLFPKPNDPDNLIYISCLPWVSFTSFSHPVPNGKDDSIPRITWGKYFEE----NG 178 (206)
T ss_dssp E---SSHHHHHHHHHHHHHHHTTS-SSSTTCCHHSSEEEEEEETTS--SEEEEEESSTTT-SS-EEEEE--EEE----TT
T ss_pred ecCCCCHHHHHHHHHHHHHHHhccccccCCCCCCcCEEEEecccceecccccccccCCCcccccEEEeeeeEeE----CC
Confidence 67889999999999988888 44565553 45579999999987766654 4443332 457999999875 44
Q ss_pred CCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHH
Q 037652 276 RNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALC 310 (316)
Q Consensus 276 ~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~ 310 (316)
|.+||||+.+.|.++||.++++|++.|+
T Consensus 179 -------r~~mPvsiqvhHa~~DG~Hv~~F~~~lQ 206 (206)
T PF00302_consen 179 -------RLLMPVSIQVHHALVDGYHVGQFFEELQ 206 (206)
T ss_dssp -------EEEEEEEEEEETTT--HHHHHHHHHHHH
T ss_pred -------EEEEEEEEEEecccccHHHHHHHHHHhC
Confidence 6799999999999999999999999885
No 22
>PRK13757 chloramphenicol acetyltransferase; Provisional
Probab=99.64 E-value=1e-14 Score=132.49 Aligned_cols=160 Identities=15% Similarity=0.122 Sum_probs=129.5
Q ss_pred cCccccHHHHHHHHHHHHHhhCcccceEEecCCCcEEEcCceeEEEEEEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHH
Q 037652 143 HNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLMTPIVRNADQKSISAISMEVKELAER 222 (316)
Q Consensus 143 ~~~kls~~~~likA~a~al~~~P~lN~~~~~~~~~i~~~~~vnigiAV~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~ 222 (316)
+..++++++.+++|+++|++++|+|+.++.++ +++.++.++.+.+|-.+++-.+-.+.-...-++.++.+...+.+++
T Consensus 49 K~~~~~fy~~~ly~v~kavN~~~eFR~r~~~~--~v~~~D~i~ps~Ti~~~~~~tFs~~~~~y~~df~~F~~~~~~~~~~ 126 (219)
T PRK13757 49 KKNKHKFYPAFIHILARLMNAHPEFRMAMKDG--ELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIYSQDVAC 126 (219)
T ss_pred HHcCCChHHHHHHHHHHHHhcCHhHheEEECC--eEEEEeEEeeeEEEEeCCCceEEEEEecCcCCHHHHHHHHHHHHHH
Confidence 34579999999999999999999999999765 4888999999999998776577778888999999999888888887
Q ss_pred ---hCCCCCCccCCCcEEEecCCCCCCCCe-EEeecCCC--eEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccc
Q 037652 223 ---AGKLAPHEFQGGTFSISNLGMFPVDQF-CAIINTPL--AGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRV 296 (316)
Q Consensus 223 ---~g~L~~~d~~ggTftISnlG~~G~~~~-~pii~~p~--~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRv 296 (316)
+..+-+.......|.||.+.-+.-+.+ .++-+... .-++..|+..++ +| |.+||||+.+.|.+
T Consensus 127 ~~~~~~~~~~~~~~n~~~iS~iPW~sFTs~~~~~~~~~~~~~P~it~GKy~~~----~g-------r~~mPvSvqvHHa~ 195 (219)
T PRK13757 127 YGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYTQ----GD-------KVLMPLAIQVHHAV 195 (219)
T ss_pred HhcCccccCCCCCCCeEEeecccCcCccccccccccCCCCcCcEEEeeceEEE----CC-------EEEEEEEEEEehhc
Confidence 334555455667999999986654443 33433332 247889999764 34 67999999999999
Q ss_pred cCcHHHHHHHHHHHHhhcC
Q 037652 297 FEGKVGCAFFSALCSNFRD 315 (316)
Q Consensus 297 iDGa~aa~FL~~l~~~Le~ 315 (316)
+||.++++|++.|+++|.+
T Consensus 196 ~DG~Hv~~F~~~lQ~~~~~ 214 (219)
T PRK13757 196 CDGFHVGRMLNELQQYCDE 214 (219)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 9999999999999998753
No 23
>PF02817 E3_binding: e3 binding domain; InterPro: IPR004167 A small domain of the E2 subunit of 2-oxo-acid dehydrogenases that is responsible for the binding of the E3 subunit. Proteins containing this domain include the branched-chain alpha-keto acid dehydrogenase complex of bacteria, which catalyses the overall conversion of alpha-keto acids to acyl-CoA and carbon dioxide; and the E-3 binding protein of eukaryotic pyruvate dehydrogenase.; GO: 0016746 transferase activity, transferring acyl groups, 0008152 metabolic process; PDB: 1BBL_A 1W4H_A 1BAL_A 2WXC_A 2BTH_A 2BTG_A 2CYU_A 2EQ7_C 2EQ8_C 3RNM_E ....
Probab=99.48 E-value=2e-14 Score=95.68 Aligned_cols=38 Identities=45% Similarity=0.643 Sum_probs=34.3
Q ss_pred CCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHH
Q 037652 31 FTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLA 68 (316)
Q Consensus 31 ~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~ 68 (316)
++.+||+||++|+|+|||+++|+|||++|||+++||++
T Consensus 2 ~i~asP~ar~la~e~gidl~~v~gtG~~GrI~k~Dv~a 39 (39)
T PF02817_consen 2 RIKASPAARKLAAELGIDLSQVKGTGPGGRITKEDVLA 39 (39)
T ss_dssp SCCCSHHHHHHHHHTT--GGGSSSSSTTSBBCHHHHHH
T ss_pred CcccCHHHHHHHHHcCCCcccccccCCCCcEeHHHhhC
Confidence 57899999999999999999999999999999999985
No 24
>COG4845 Chloramphenicol O-acetyltransferase [Defense mechanisms]
Probab=99.33 E-value=6e-11 Score=104.94 Aligned_cols=173 Identities=14% Similarity=0.068 Sum_probs=127.9
Q ss_pred hcCCeEEEee---------cccCccccHHHHHHHHHHHHHhhCcccceEEecCCCcEEEcCceeEEEEEEcCCCeeeeEE
Q 037652 131 QTAPHLYLSS---------KKHNIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLMTPIV 201 (316)
Q Consensus 131 ~~iP~~~~~~---------~~~~~kls~~~~likA~a~al~~~P~lN~~~~~~~~~i~~~~~vnigiAV~~~~GL~vpVI 201 (316)
..+||+.+.- --+..+++++..+++|+.++++++++|+.++.++. +++++.++..++|.++++-.+-|+
T Consensus 26 ~~~p~y~i~~~LDvtn~~~~vk~~~l~Ff~a~l~avtr~~n~~~EFRlr~~~~~--~~~~d~v~p~~tv~~~~~e~Fs~l 103 (219)
T COG4845 26 LQYPHYDINLQLDVTNFYGYVKENGLSFFPALLYAVTRCANRHQEFRLRIQNGQ--LGYWDNVPPMYTVFHGETETFSVL 103 (219)
T ss_pred cccceEeeeeeeehhHHHHHHHHcCCcchHHHHHHHHHHhcccHHhHhhhcCCe--eEEeecCCcceEEEcCCCcEEEEE
Confidence 3679987654 11223899999999999999999999999998764 999999999999999888788888
Q ss_pred ecCCCCCHHHHHHHHHHHHHH---hCCCCCCcc-CCCcEEEecCCCCCCCCeEEeecC--C-CeEEEEeccceeEEEEec
Q 037652 202 RNADQKSISAISMEVKELAER---AGKLAPHEF-QGGTFSISNLGMFPVDQFCAIINT--P-LAGILVVGRGNQVVELVI 274 (316)
Q Consensus 202 ~~a~~~sl~eIa~~i~~l~~~---~g~L~~~d~-~ggTftISnlG~~G~~~~~pii~~--p-~~aIL~vG~i~~~p~~~~ 274 (316)
.-..+.++.++++...+-+++ +..+.++|- ..-...+||+.-+.-..+..=++- - ..-|+..|+-.++
T Consensus 104 ~~e~~~~~~dF~q~y~~~ie~~~~~~~~~~k~~~~~~~~~~s~lPWlsFtslS~~~~~~k~~~~PiF~~Grf~~~----- 178 (219)
T COG4845 104 WTEYQEDYEDFAQLYIEDIEQYGANNYERAKDPTPCDVYIFSNLPWLSFTSLSHHYRRNKIYGQPIFYAGRFYEE----- 178 (219)
T ss_pred eccccccHHHHHHHHHHHHHHhccCcccccCCCCcceeEEeccccccceeeeeeeccCCccccceeEeecceecc-----
Confidence 888999999999999887777 333333221 123455566654322221111110 0 0124557777654
Q ss_pred CCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhcCC
Q 037652 275 GRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFRDI 316 (316)
Q Consensus 275 g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le~P 316 (316)
|| +-+|||++...|..+||.++++|+..|.+++++|
T Consensus 179 --~G----kl~lPlavq~hHA~vDG~Hi~~l~~~lQ~~~~~~ 214 (219)
T COG4845 179 --DG----KLTLPLAVQAHHANVDGFHIGQLFDQLQTLFSPP 214 (219)
T ss_pred --CC----eEEEeEEEEecccccchhhHHHHHHHHHHHhcCC
Confidence 34 3489999999999999999999999999999986
No 25
>PRK14843 dihydrolipoamide acetyltransferase; Provisional
Probab=97.84 E-value=8.2e-06 Score=79.24 Aligned_cols=42 Identities=24% Similarity=0.394 Sum_probs=38.5
Q ss_pred CCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhhh
Q 037652 32 TKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKSE 73 (316)
Q Consensus 32 ~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~~ 73 (316)
..+||.+|++|+|+|||++.|+|||++|||+++||++|....
T Consensus 6 ~~asPaar~la~e~~idl~~i~gtG~~gri~k~Dv~~~~~~~ 47 (347)
T PRK14843 6 LRATPAARKLADDLGINLYDVSGSGANGRVHKEDVETYKDTN 47 (347)
T ss_pred ccCChHHHHHHHHcCCCHHHCCCCCCCCceeHHHHhhhcccc
Confidence 457899999999999999999999999999999999997643
No 26
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=90.47 E-value=3.7 Score=41.07 Aligned_cols=29 Identities=17% Similarity=0.275 Sum_probs=23.3
Q ss_pred EEEEEEEecccccCcHHH-HHHHHHHHHhh
Q 037652 285 KMNLTLSADHRVFEGKVG-CAFFSALCSNF 313 (316)
Q Consensus 285 ~m~lsls~DHRviDGa~a-a~FL~~l~~~L 313 (316)
-|++++++=.-+++-.+. -+|++.|++.|
T Consensus 451 ~L~i~~s~~~~~~~~~~~~~~~~~~~~~~~ 480 (480)
T PF07247_consen 451 GLNISISWQEGIVEDEEMEDEFMELFKQNL 480 (480)
T ss_pred ceEEEEEEeCCcccccchHHHHHHHHHhhC
Confidence 489999988888876666 59999998865
No 27
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.
Probab=87.93 E-value=5.8 Score=39.19 Aligned_cols=146 Identities=18% Similarity=0.117 Sum_probs=77.1
Q ss_pred CccccHHHHHHHHHHHHHhhCcccceEEecCCCcEEEcCceeEEEEEEcCC-----------CeeeeEEecCCCCCHHHH
Q 037652 144 NIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEK-----------GLMTPIVRNADQKSISAI 212 (316)
Q Consensus 144 ~~kls~~~~likA~a~al~~~P~lN~~~~~~~~~i~~~~~vnigiAV~~~~-----------GL~vpVI~~a~~~sl~eI 212 (316)
..+.|++++++-|++.+|.++ ++.. + . .....+.+++.|+... |.++..+. .+..+..+.
T Consensus 247 ~~g~T~ndvllaa~~~al~~~--~~~~--~---~-~~~~~i~~~~pv~~R~~~~~~~~~N~~~~~~~~l~-~~~~~~~~~ 317 (446)
T TIGR02946 247 AFGVTINDVVLAAVAGALRRY--LEER--G---E-LPDDPLVAMVPVSLRPMEDDSEGGNQVSAVLVPLP-TGIADPVER 317 (446)
T ss_pred HhCCCHHHHHHHHHHHHHHHH--HHHc--C---C-CCCCceEEEEeeeccccccCCCCCCEEEEEEecCC-CCCCCHHHH
Confidence 357899999999999999886 2221 1 0 1223477888887421 22222222 122333333
Q ss_pred HHHHHHHHHH-----hCC----------CCCC-----------c--cCCCcEEEecCCCCCC---------CCeEEeecC
Q 037652 213 SMEVKELAER-----AGK----------LAPH-----------E--FQGGTFSISNLGMFPV---------DQFCAIINT 255 (316)
Q Consensus 213 a~~i~~l~~~-----~g~----------L~~~-----------d--~~ggTftISnlG~~G~---------~~~~pii~~ 255 (316)
..++++-... ... +.|. + ....|++|||++.... ..+.++..+
T Consensus 318 l~~v~~~~~~~k~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~~~~~~~SNvpg~~~~~~~~g~~v~~~~~~~p~ 397 (446)
T TIGR02946 318 LSAIHASMTRAKESGQAMGANALLALSGLLPAPLLRLALRALARKAQRLFNLVISNVPGPREPLYLAGAKLDELYPLSPL 397 (446)
T ss_pred HHHHHHHHHHHHHhHhhcCHHHHHHHHHhccHHHHHHHHHHhhccCCCceeEEEeCCCCCCcccEecCeeEEEeeccccc
Confidence 3444433322 111 1111 0 0124899999974332 112333222
Q ss_pred CCeEEEEeccceeEEEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhc
Q 037652 256 PLAGILVVGRGNQVVELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFR 314 (316)
Q Consensus 256 p~~aIL~vG~i~~~p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le 314 (316)
..-..|+++-... +| .|.+++++|-.++.. ..+|+..|++.|+
T Consensus 398 ~~~~~l~~~~~sy-----~g---------~l~~~~~~d~~~~~d--~~~l~~~~~~~l~ 440 (446)
T TIGR02946 398 LDGQGLNITVTSY-----NG---------QLDFGLLADRDAVPD--PQELADALEAALE 440 (446)
T ss_pred cCCCeEEEEEEec-----CC---------eEEEEEeechhhCCC--HHHHHHHHHHHHH
Confidence 1112233333221 23 689999999998874 7778888877665
No 28
>PRK09294 acyltransferase PapA5; Provisional
Probab=80.39 E-value=29 Score=33.98 Aligned_cols=90 Identities=19% Similarity=0.265 Sum_probs=49.9
Q ss_pred ccccHHHHHHHHHHHHHhhCcccceEEecCCCcEEEcCceeEEEEEEcC-------------C--CeeeeEEecCCCCCH
Q 037652 145 IKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATE-------------K--GLMTPIVRNADQKSI 209 (316)
Q Consensus 145 ~kls~~~~likA~a~al~~~P~lN~~~~~~~~~i~~~~~vnigiAV~~~-------------~--GL~vpVI~~a~~~sl 209 (316)
.++|++.+++-|++.++.+.-... + ..+.+++.|+.. + |+....+.-....++
T Consensus 228 ~~~t~~~~l~Aa~~~~l~r~~~~~-----~-------~~i~~~~pv~~R~~l~p~~~~~~~~n~~g~~~~~~~~~~~~sf 295 (416)
T PRK09294 228 HRLTVNALVSAAILLAEWQLRRTP-----H-------VPLPYVYPVDLRFRLTPPVAATEGTNLLGAATYLAEIGPDTDI 295 (416)
T ss_pred cCCcHHHHHHHHHHHHHHHhcCCC-----C-------CceeeecchhhHhhcCCCCCcccceeeEeeeeeeccccCCCCH
Confidence 368999999999999987642110 0 112233333320 1 111112233345799
Q ss_pred HHHHHHHHHHHHH---hCCC----CC--CccCC------CcEEEecCCCCCC
Q 037652 210 SAISMEVKELAER---AGKL----AP--HEFQG------GTFSISNLGMFPV 246 (316)
Q Consensus 210 ~eIa~~i~~l~~~---~g~L----~~--~d~~g------gTftISnlG~~G~ 246 (316)
.++++++++.... .+.+ .. .-+.+ .++++||+|.++.
T Consensus 296 ~ela~~v~~~~~~~l~~~~v~~~~~~~~~~~~~~~~~~~~~v~~Snlg~~~~ 347 (416)
T PRK09294 296 VDLARAIAATLRADLADGVIQQSFLHFGTAFEGTPPGLPPVVFITNLGVAPP 347 (416)
T ss_pred HHHHHHHHHHHhhhhhcceeeehhhcccccccCCCCCCCCeEEEecCCcCCC
Confidence 9999999876543 2221 10 01111 3799999998854
No 29
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics. This domain catalyses a condensation reaction to form peptide bonds in non-ribosomal peptide biosynthesis. It is usually found to the carboxy side of a phosphopantetheine binding domain (pp-binding). It has been shown that mutations in the HHXXXDG motif abolish activity suggesting this is part of the active site []. ; PDB: 2JGP_A 2VSQ_A 1L5A_A 2JUG_A 1Q9J_A.
Probab=68.22 E-value=88 Score=27.87 Aligned_cols=30 Identities=17% Similarity=0.203 Sum_probs=24.4
Q ss_pred EEEEEEEecccccCcHHHHHHHHHHHHhhc
Q 037652 285 KMNLTLSADHRVFEGKVGCAFFSALCSNFR 314 (316)
Q Consensus 285 ~m~lsls~DHRviDGa~aa~FL~~l~~~Le 314 (316)
...|.+.+||=++||.-...|++.|.++++
T Consensus 128 ~~~l~~~~hH~i~Dg~S~~~l~~~l~~~y~ 157 (301)
T PF00668_consen 128 EYFLLISFHHIICDGWSLNILLRELLQAYA 157 (301)
T ss_dssp EEEEEEEEEGGG--HHHHHHHHHHHHHHHH
T ss_pred cchhcccccccccccccchhhhhhhHHhhh
Confidence 357888899999999999999999988765
No 30
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]
Probab=64.06 E-value=1e+02 Score=31.04 Aligned_cols=69 Identities=14% Similarity=0.154 Sum_probs=47.1
Q ss_pred CccccHHHHHHHHHHHHHhhCcccceEEecCCCcEEEcCceeEEEEEEcC-------------CCeeeeEEecCCCCCHH
Q 037652 144 NIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATE-------------KGLMTPIVRNADQKSIS 210 (316)
Q Consensus 144 ~~kls~~~~likA~a~al~~~P~lN~~~~~~~~~i~~~~~vnigiAV~~~-------------~GL~vpVI~~a~~~sl~ 210 (316)
..+.|++++++.|+++--..+-.. .+ -.++++.|+++||.. .+....+|+..+-.++.
T Consensus 236 ~~gaTiNDiilaa~~~fr~~y~~~---~~------k~~~~lsi~~~VDlRkyl~sk~~sI~Nls~~~~i~I~~dd~~~fe 306 (439)
T COG4908 236 VHGATINDIILAALLKFRLLYNTT---HE------KANNYLSIDMPVDLRKYLPSKEESISNLSSYLTIVINVDDVTDFE 306 (439)
T ss_pred hcCCcHHHHHHHHHHHHHHHHhhh---ch------hhcCeeeeceeeehhhhccccccceeccceeEEEEEeccccccHH
Confidence 357899999999995433222111 11 123556677788731 24677889999999999
Q ss_pred HHHHHHHHHHH
Q 037652 211 AISMEVKELAE 221 (316)
Q Consensus 211 eIa~~i~~l~~ 221 (316)
...+.+++...
T Consensus 307 ~t~~~vk~~~~ 317 (439)
T COG4908 307 KTLEKVKGIMN 317 (439)
T ss_pred HHHHHHHhhcC
Confidence 99999988766
No 31
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase
Probab=57.42 E-value=12 Score=37.09 Aligned_cols=29 Identities=21% Similarity=0.359 Sum_probs=26.8
Q ss_pred EEEEEEecccccCcHHHHHHHHHHHHhhc
Q 037652 286 MNLTLSADHRVFEGKVGCAFFSALCSNFR 314 (316)
Q Consensus 286 m~lsls~DHRviDGa~aa~FL~~l~~~Le 314 (316)
+-|++++.|.++||.-+..|++.+.+...
T Consensus 145 ~~lg~~~~H~v~Dg~g~~~fl~awa~~~r 173 (431)
T PLN02663 145 VSLGVGMQHHAADGFSGLHFINTWSDMAR 173 (431)
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHhc
Confidence 67899999999999999999999998764
No 32
>PLN00140 alcohol acetyltransferase family protein; Provisional
Probab=56.44 E-value=12 Score=37.46 Aligned_cols=29 Identities=24% Similarity=0.504 Sum_probs=26.8
Q ss_pred EEEEEEecccccCcHHHHHHHHHHHHhhc
Q 037652 286 MNLTLSADHRVFEGKVGCAFFSALCSNFR 314 (316)
Q Consensus 286 m~lsls~DHRviDGa~aa~FL~~l~~~Le 314 (316)
+-|.+++.|.++||.-+..|++.+.++..
T Consensus 148 ~~lG~~~~H~v~Dg~s~~~Fl~~WA~~~r 176 (444)
T PLN00140 148 IALGLCFSHKIIDAATASAFLDSWAANTR 176 (444)
T ss_pred EEEEeeeceEcccHHHHHHHHHHHHHHhc
Confidence 68899999999999999999999998764
No 33
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis []. Deacetylvindoline 4-O-acetyltransferase (2.3.1.107 from EC) catalyzes the last step in vindoline biosynthesis is also a member of this family []. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 2BGH_B 2E1U_B 2E1T_A 2E1V_A 2XR7_A 3B30_A 2RKT_A 3B2S_A 2RKV_A 2ZBA_C ....
Probab=54.46 E-value=15 Score=36.01 Aligned_cols=29 Identities=28% Similarity=0.316 Sum_probs=24.9
Q ss_pred EEEEEEecccccCcHHHHHHHHHHHHhhc
Q 037652 286 MNLTLSADHRVFEGKVGCAFFSALCSNFR 314 (316)
Q Consensus 286 m~lsls~DHRviDGa~aa~FL~~l~~~Le 314 (316)
+-|++++.|.++||.-+..|++.+.+...
T Consensus 147 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r 175 (432)
T PF02458_consen 147 LALGVSFHHAVADGTGFSQFLKAWAEICR 175 (432)
T ss_dssp EEEEEEEETTT--HHHHHHHHHHHHHHHH
T ss_pred eeeeeeceeccCcccchhHHHHHHHhhhc
Confidence 68999999999999999999999998764
No 34
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase
Probab=51.45 E-value=17 Score=36.11 Aligned_cols=29 Identities=24% Similarity=0.384 Sum_probs=27.0
Q ss_pred EEEEEEecccccCcHHHHHHHHHHHHhhc
Q 037652 286 MNLTLSADHRVFEGKVGCAFFSALCSNFR 314 (316)
Q Consensus 286 m~lsls~DHRviDGa~aa~FL~~l~~~Le 314 (316)
+-|++++.|.++||.-+..|++.+.+.+.
T Consensus 158 ~~lg~~~~H~v~Dg~g~~~fl~~WA~~~r 186 (436)
T PLN02481 158 FVLGLCMNHCMFDGIGAMEFVNSWGETAR 186 (436)
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHHhc
Confidence 68999999999999999999999998765
No 35
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2.3.1.84 from EC) enzymes approximately 500 residues long that seem to be restricted to Saccharomyces. These catalyse the esterification of isoamyl alcohol by acetyl coenzyme A [].; GO: 0004026 alcohol O-acetyltransferase activity, 0006066 alcohol metabolic process
Probab=50.18 E-value=18 Score=36.11 Aligned_cols=31 Identities=19% Similarity=0.344 Sum_probs=28.4
Q ss_pred EEEEEEEecccccCcHHHHHHHHHHHHhhcC
Q 037652 285 KMNLTLSADHRVFEGKVGCAFFSALCSNFRD 315 (316)
Q Consensus 285 ~m~lsls~DHRviDGa~aa~FL~~l~~~Le~ 315 (316)
...|.+.|||-+.||.-+..|.+.|-+.|..
T Consensus 140 ~~~i~f~~~H~i~DG~Sg~~Fh~~ll~~L~~ 170 (480)
T PF07247_consen 140 FQFIVFVFHHAIFDGMSGKIFHEDLLEALNS 170 (480)
T ss_pred ceEEEEEecccccccHHHHHHHHHHHHHHhh
Confidence 5678999999999999999999999998875
No 36
>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional
Probab=45.25 E-value=24 Score=35.15 Aligned_cols=152 Identities=14% Similarity=0.140 Sum_probs=79.7
Q ss_pred eecChHHHHHHHHHHHHHhhcCCeEEEeecccC-ccccHHHHHHHHHHHHHhhCcccceEEecC-CCcEEEcCceeEEEE
Q 037652 112 DLPNTQIRKAIARRLLELKQTAPHLYLSSKKHN-IKVSVNDIVIKAVAVALKNVPEANSYWNVE-TEEIVLFDAIDISIA 189 (316)
Q Consensus 112 ~~pls~~Rk~ia~~m~~S~~~iP~~~~~~~~~~-~kls~~~~likA~a~al~~~P~lN~~~~~~-~~~i~~~~~vnigiA 189 (316)
..+||.+=+.+. ...+|.++.+..... ....+.+-|=.+++++|..|+-|.+++... ++++. |+.
T Consensus 21 ~~~LS~lD~~~~------~~~v~~v~fy~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~~~~~g~~~----i~c--- 87 (447)
T PLN03157 21 RRSLSEWDQVGT------ITHVPTIYFYSPPWNTSSGSIIEILKDSLSRALVPFYPLAGRLRWIGGGRLE----LEC--- 87 (447)
T ss_pred ccCCChhhhccc------cccCCEEEEEeCCCccccccHHHHHHHHHHHHHhhccccCEEEEEcCCCcEE----EEE---
Confidence 357777754321 135777777653211 112446778899999999999999998532 11121 111
Q ss_pred EEcCCCeeeeEEecCCCCCHHHHHHHHHHHHHHhCCCCCCccCCCcEEEecCCCCCCCCeEEeecCCCeEEEEeccceeE
Q 037652 190 VATEKGLMTPIVRNADQKSISAISMEVKELAERAGKLAPHEFQGGTFSISNLGMFPVDQFCAIINTPLAGILVVGRGNQV 269 (316)
Q Consensus 190 V~~~~GL~vpVI~~a~~~sl~eIa~~i~~l~~~~g~L~~~d~~ggTftISnlG~~G~~~~~pii~~p~~aIL~vG~i~~~ 269 (316)
.++|..+-. -.+ +.+|.|+... ... ..-..|-|.. ..-+.....|++ ++ + .
T Consensus 88 --~~~Gv~fve-A~~-~~~l~~~~~~-~~~-~~~~~l~P~~-----------~~~~~~~~~Pll--------~v---Q-v 138 (447)
T PLN03157 88 --NAMGVLLIE-AES-EAKLDDFGDF-SPT-PEFEYLIPSV-----------DYTKPIHELPLL--------LV---Q-L 138 (447)
T ss_pred --CCCCeEEEE-EEe-CCcHHHhhcc-CCC-HHHHhhcCCC-----------CcccccccCceE--------EE---E-E
Confidence 246633322 223 3678777321 000 0000121210 000000001221 11 1 0
Q ss_pred EEEecCCCCCcEEEeEEEEEEEecccccCcHHHHHHHHHHHHhhc
Q 037652 270 VELVIGRNEIPAVVTKMNLTLSADHRVFEGKVGCAFFSALCSNFR 314 (316)
Q Consensus 270 p~~~~g~~~~i~~r~~m~lsls~DHRviDGa~aa~FL~~l~~~Le 314 (316)
-....| | +-|++++.|.++||.-+..|++.+.+...
T Consensus 139 T~F~cG--G-------~~lg~~~~H~v~Dg~~~~~fl~aWA~~~r 174 (447)
T PLN03157 139 TKFSCG--G-------ISLGLGISHAVADGQSALHFISEWARIAR 174 (447)
T ss_pred EEecCC--C-------EEEEEEeeccccchHhHHHHHHHHHHHhc
Confidence 011122 1 68999999999999999999999998764
No 37
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=38.55 E-value=32 Score=26.49 Aligned_cols=23 Identities=30% Similarity=0.395 Sum_probs=19.8
Q ss_pred eeeeEEecCCCCCHHHHHHHHHHH
Q 037652 196 LMTPIVRNADQKSISAISMEVKEL 219 (316)
Q Consensus 196 L~vpVI~~a~~~sl~eIa~~i~~l 219 (316)
.-+||| ||..+|..||.+++++-
T Consensus 56 ~~~pVI-nA~G~T~eEI~~~v~~r 78 (80)
T PF03698_consen 56 TKVPVI-NASGLTAEEIVQEVEER 78 (80)
T ss_pred cCceEE-ecCCCCHHHHHHHHHHh
Confidence 356999 99999999999999763
No 38
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=37.59 E-value=2.7e+02 Score=31.77 Aligned_cols=139 Identities=10% Similarity=0.056 Sum_probs=76.8
Q ss_pred CccccHHHHHHHHHHHHHhhCcccceEEecCCCcEEEcCceeEEEEEEcCCCeeeeE-EecCCCCCHHHHHHHHHHHHHH
Q 037652 144 NIKVSVNDIVIKAVAVALKNVPEANSYWNVETEEIVLFDAIDISIAVATEKGLMTPI-VRNADQKSISAISMEVKELAER 222 (316)
Q Consensus 144 ~~kls~~~~likA~a~al~~~P~lN~~~~~~~~~i~~~~~vnigiAV~~~~GL~vpV-I~~a~~~sl~eIa~~i~~l~~~ 222 (316)
..++|++.+++-|.+..|.++= +. ++|-||+.++... -.+|+ ++-....++.++.+++++....
T Consensus 43 ~~~~t~~~~l~aa~~~lL~r~s-------g~-------~dv~iG~~~~~R~-~~lplr~~~~~~~t~~~~l~~~~~~~~~ 107 (1389)
T TIGR03443 43 GGGSTPFIILLAAFAALVYRLT-------GD-------EDIVLGTSSNKSG-RPFVLRLNITPELSFLQLYAKVSEEEKE 107 (1389)
T ss_pred hcCCCHHHHHHHHHHHHHHHHc-------CC-------CceEEEeeeCCCC-ceEEEEecCCCCCCHHHHHHHHHHHHHH
Confidence 3478999999999999996543 33 2344677665432 34565 6677889999999998765444
Q ss_pred --h-CCCCCCc----------cCCC--cEEEecCCCCCCCCeEEeecCCCeEEEEeccceeEEE-EecCCCCCcEEEeEE
Q 037652 223 --A-GKLAPHE----------FQGG--TFSISNLGMFPVDQFCAIINTPLAGILVVGRGNQVVE-LVIGRNEIPAVVTKM 286 (316)
Q Consensus 223 --~-g~L~~~d----------~~gg--TftISnlG~~G~~~~~pii~~p~~aIL~vG~i~~~p~-~~~g~~~~i~~r~~m 286 (316)
. ..+..++ .... -|.+ ++... ..+ ... .+.-+.-.+--+ +.+. ...+
T Consensus 108 ~~~h~~~p~~~i~~~l~~~~~~~~~p~lf~~-~~~~~--~~~-~~~------~~~~~~~~dl~~~v~~~-------~~~l 170 (1389)
T TIGR03443 108 GASDIGVPFDELSEHIQAAKKLERTPPLFRL-AFQDA--PDN-QQT------TYSTGSTTDLTVFLTPS-------SPEL 170 (1389)
T ss_pred HHhcccCCHHHHHHHhccccCCCCCCccEEE-EeecC--Ccc-ccc------ccccCCccceEEEEEec-------CCcE
Confidence 2 2221111 1111 1221 11000 000 000 000011111000 1110 1247
Q ss_pred EEEEEecccccCcHHHHHHHHHHHHhhc
Q 037652 287 NLTLSADHRVFEGKVGCAFFSALCSNFR 314 (316)
Q Consensus 287 ~lsls~DHRviDGa~aa~FL~~l~~~Le 314 (316)
.+++.||..+.|-..+.+|++.|..+|+
T Consensus 171 ~l~~~y~~~lf~~~~i~~l~~~f~~lL~ 198 (1389)
T TIGR03443 171 ELSIYYNSLLFSSDRITIVADQLAQLLS 198 (1389)
T ss_pred EEEEEEchhcCCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998888775
No 39
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=37.48 E-value=34 Score=26.43 Aligned_cols=29 Identities=17% Similarity=0.088 Sum_probs=26.2
Q ss_pred EEEEEecccccCcHHHHHHHHHHHHhhcC
Q 037652 287 NLTLSADHRVFEGKVGCAFFSALCSNFRD 315 (316)
Q Consensus 287 ~lsls~DHRviDGa~aa~FL~~l~~~Le~ 315 (316)
..++.+|-|+.++.+..++++.+++++++
T Consensus 78 ~a~~~~~~R~~p~~~~~~i~~~i~~~~~~ 106 (111)
T PF07687_consen 78 EATLTVDIRYPPGEDLEEIKAEIEAAVEK 106 (111)
T ss_dssp EEEEEEEEEESTCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEECCCcchHHHHHHHHHHHHHH
Confidence 46788999999999999999999999873
No 40
>smart00226 LMWPc Low molecular weight phosphatase family.
Probab=29.36 E-value=35 Score=28.11 Aligned_cols=33 Identities=27% Similarity=0.308 Sum_probs=25.7
Q ss_pred CCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHH
Q 037652 32 TKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAA 69 (316)
Q Consensus 32 ~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 69 (316)
-...|.|.++++++|||++... . .|+.+|++.+
T Consensus 40 ~~~~~~a~~~l~~~Gid~~~~~----~-~l~~~~~~~~ 72 (140)
T smart00226 40 GGADPRAVEVLKEHGIALSHHA----S-QLTSSDFKNA 72 (140)
T ss_pred CCCCHHHHHHHHHcCcCcccee----c-cCCHHHHHhC
Confidence 3468999999999999987422 2 7888888755
No 41
>COG1725 Predicted transcriptional regulators [Transcription]
Probab=29.13 E-value=15 Score=30.74 Aligned_cols=19 Identities=26% Similarity=0.508 Sum_probs=17.1
Q ss_pred ChhHhhcchhcCCCCCccc
Q 037652 35 SPSAKLLIPEHGLDASSLQ 53 (316)
Q Consensus 35 sP~aR~lA~e~gidl~~v~ 53 (316)
=|.+|.||.++||++.+|.
T Consensus 35 LPSvRelA~~~~VNpnTv~ 53 (125)
T COG1725 35 LPSVRELAKDLGVNPNTVQ 53 (125)
T ss_pred CCcHHHHHHHhCCCHHHHH
Confidence 4999999999999998765
No 42
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.71 E-value=58 Score=27.26 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=29.8
Q ss_pred ChhHhhcchhcCCCCCcccccCCCCceehhhHHHHHhh
Q 037652 35 SPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAAIKS 72 (316)
Q Consensus 35 sP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~~~~ 72 (316)
.-..+.-|++.|++..-|+=+| +-||++||+.+...
T Consensus 47 ~~~i~~aa~~aGl~y~~iPV~~--~~iT~~dV~~f~~A 82 (130)
T COG3453 47 FAAIAAAAEAAGLTYTHIPVTG--GGITEADVEAFQRA 82 (130)
T ss_pred hHHHHHHHHhcCCceEEeecCC--CCCCHHHHHHHHHH
Confidence 3566788999999999999776 56999999998653
No 43
>PRK03094 hypothetical protein; Provisional
Probab=22.91 E-value=82 Score=24.30 Aligned_cols=23 Identities=13% Similarity=0.209 Sum_probs=19.9
Q ss_pred CeeeeEEecCCCCCHHHHHHHHHH
Q 037652 195 GLMTPIVRNADQKSISAISMEVKE 218 (316)
Q Consensus 195 GL~vpVI~~a~~~sl~eIa~~i~~ 218 (316)
..-+||| +|..||..||.+++++
T Consensus 55 ~t~~pVI-~A~G~TaeEI~~~ve~ 77 (80)
T PRK03094 55 STKGSVI-TASGLTADEICQQVES 77 (80)
T ss_pred ccCCcEE-EcCCCCHHHHHHHHHH
Confidence 3558999 9999999999999874
No 44
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=22.44 E-value=78 Score=26.18 Aligned_cols=37 Identities=19% Similarity=0.395 Sum_probs=31.5
Q ss_pred CCCCCHHHHHHHHHHHHHH---hCCCCCCccCCCcEEEec
Q 037652 204 ADQKSISAISMEVKELAER---AGKLAPHEFQGGTFSISN 240 (316)
Q Consensus 204 a~~~sl~eIa~~i~~l~~~---~g~L~~~d~~ggTftISn 240 (316)
++.-+-.+|.+..++|.+. .|.|.++|+..-+||+|.
T Consensus 10 v~~nt~e~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~ 49 (117)
T TIGR01796 10 VERNEAEEIGEAVAELLTELMERNELTPEDLISVIFTVTE 49 (117)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecC
Confidence 3566788999999999888 899999999878888876
No 45
>PF01451 LMWPc: Low molecular weight phosphotyrosine protein phosphatase; InterPro: IPR023485 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents the low molecular weight (LMW) protein-tyrosine phosphatases (or acid phosphatase), which act on tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates [, ]. The structure of a LMW PTPase has been solved by X-ray crystallography [] and is found to form a single structural domain. It belongs to the alpha/beta class, with 6 alpha-helices and 4 beta-strands forming a 3-layer alpha-beta-alpha sandwich architecture.; PDB: 3RH0_B 1JL3_B 2IPA_B 1Z2D_A 1Z2E_A 2CWD_D 2L18_A 2L17_A 2L19_A 1BVH_A ....
Probab=21.26 E-value=74 Score=25.96 Aligned_cols=36 Identities=28% Similarity=0.396 Sum_probs=27.0
Q ss_pred CCCCCChhHhhcchhcCCCCCcccccCCCCceehhhHHHH
Q 037652 30 SFTKISPSAKLLIPEHGLDASSLQASGPYGTLLKGDVLAA 69 (316)
Q Consensus 30 ~~~~asP~aR~lA~e~gidl~~v~gtG~~GrI~~~DV~~~ 69 (316)
.+....|.|.+.++++|||++.-... .++.+|+..+
T Consensus 42 ~~~~~~~~a~~~l~~~gid~~~~~s~----~l~~~~~~~~ 77 (138)
T PF01451_consen 42 PGEPVDPRAIAVLKEHGIDISGHRSR----QLTEEDLDEA 77 (138)
T ss_dssp TTSSSTHHHHHHHHHTTSSCTTSBBC----BGGHHHHHHS
T ss_pred ccccccchHHHHHHHhCCCcccceec----cccccccccC
Confidence 34567899999999999999865432 5777776654
No 46
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=20.79 E-value=88 Score=25.87 Aligned_cols=37 Identities=16% Similarity=0.368 Sum_probs=31.4
Q ss_pred CCCCCHHHHHHHHHHHHHH---hCCCCCCccCCCcEEEec
Q 037652 204 ADQKSISAISMEVKELAER---AGKLAPHEFQGGTFSISN 240 (316)
Q Consensus 204 a~~~sl~eIa~~i~~l~~~---~g~L~~~d~~ggTftISn 240 (316)
++.-+-.+|.+..++|.+. .|.|.++|+..-+||+|.
T Consensus 10 v~~nt~e~I~~at~eLl~~i~~~N~l~~edivSv~FT~T~ 49 (117)
T cd02185 10 VEENTAEEILEATRELLEEIIERNNIKPEDIISVIFTVTP 49 (117)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCC
Confidence 3566788999999999888 899999999877888876
Done!