BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037654
MPVNIGATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIE
RNPGTKLPEGPYSTTSPTADPSHLPR

High Scoring Gene Products

Symbol, full name Information P value
AT2G32090 protein from Arabidopsis thaliana 4.9e-30
GLYI8
AT2G28420 		protein from Arabidopsis thaliana 7.8e-07

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037654
        (86 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2045482 - symbol:AT2G32090 "AT2G32090" species...   332  4.9e-30   1
TAIR|locus:2057522 - symbol:GLYI8 "AT2G28420" species:370...   113  7.8e-07   1


>TAIR|locus:2045482 [details] [associations]
            symbol:AT2G32090 "AT2G32090" species:3702 "Arabidopsis
            thaliana" [GO:0004462 "lactoylglutathione lyase activity"
            evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0005975
            "carbohydrate metabolic process" evidence=ISS] [GO:0006661
            "phosphatidylinositol biosynthetic process" evidence=RCA]
            [GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
            EMBL:CP002685 GO:GO:0016829 EMBL:AC006223 InterPro:IPR025870
            Pfam:PF12681 EMBL:AY058893 EMBL:AY079042 IPI:IPI00533148 PIR:H84728
            RefSeq:NP_565737.1 UniGene:At.20803 ProteinModelPortal:Q9SKZ0
            SMR:Q9SKZ0 PRIDE:Q9SKZ0 EnsemblPlants:AT2G32090.1 GeneID:817769
            KEGG:ath:AT2G32090 TAIR:At2g32090 InParanoid:Q9SKZ0 OMA:PDGRTRQ
            PhylomeDB:Q9SKZ0 ProtClustDB:CLSN2688622 ArrayExpress:Q9SKZ0
            Genevestigator:Q9SKZ0 Uniprot:Q9SKZ0
        Length = 135

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 58/79 (73%), Positives = 69/79 (87%)

Query:     7 ATLNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTK 66
             A+L HI+RESSDI RLA FYKE+FGFEEIE+P+FG+ +V+WLNLPGAFA+H+I+RNP T 
Sbjct:     2 ASLGHIARESSDITRLAQFYKEVFGFEEIESPDFGDLQVVWLNLPGAFAMHIIQRNPSTN 61

Query:    67 LPEGPYSTTSPTADPSHLP 85
             LPEGPYS TS   DPSHLP
Sbjct:    62 LPEGPYSATSAVKDPSHLP 80


>TAIR|locus:2057522 [details] [associations]
            symbol:GLYI8 "AT2G28420" species:3702 "Arabidopsis
            thaliana" [GO:0004462 "lactoylglutathione lyase activity"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005975
            "carbohydrate metabolic process" evidence=ISS] [GO:0009845 "seed
            germination" evidence=RCA] [GO:0016114 "terpenoid biosynthetic
            process" evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA]
            [GO:0050826 "response to freezing" evidence=RCA] EMBL:CP002685
            GO:GO:0016829 EMBL:AC006283 InterPro:IPR025870 Pfam:PF12681
            IPI:IPI00520325 PIR:F84684 RefSeq:NP_029429.1 UniGene:At.13736
            ProteinModelPortal:Q9SKM8 SMR:Q9SKM8 EnsemblPlants:AT2G28420.1
            GeneID:817390 KEGG:ath:AT2G28420 TAIR:At2g28420 InParanoid:Q9SKM8
            OMA:SFQCEDM PhylomeDB:Q9SKM8 ProtClustDB:CLSN2688514
            ArrayExpress:Q9SKM8 Genevestigator:Q9SKM8 Uniprot:Q9SKM8
        Length = 184

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 23/60 (38%), Positives = 34/60 (56%)

Query:     9 LNHISRESSDIRRLADFYKEIFGFEEIEAPNFGEFKVIWLNLPGAFALHLIERNPGTKLP 68
             LNH+SR   D+++  +FY ++ GF EIE P   +F   WL   G   +HL++     KLP
Sbjct:    21 LNHVSRLCKDVKKSLEFYTKVLGFVEIERPASFDFDGAWLFNYGV-GIHLVQAKDQDKLP 79


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.139   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       86        86   0.00091  102 3  11 22  0.49    29
                                                     29  0.47    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  534 (57 KB)
  Total size of DFA:  105 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.32u 0.17s 11.49t   Elapsed:  00:00:00
  Total cpu time:  11.32u 0.17s 11.49t   Elapsed:  00:00:00
  Start:  Thu May  9 17:10:35 2013   End:  Thu May  9 17:10:35 2013

Back to top