Query 037655
Match_columns 1125
No_of_seqs 163 out of 178
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 03:07:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037655.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037655hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05664 DUF810: Protein of un 100.0 2E-175 4E-180 1562.1 56.2 637 174-819 1-677 (677)
2 KOG1011 Neurotransmitter relea 100.0 3.7E-26 8E-31 262.0 37.8 526 395-1021 469-1097(1283)
3 KOG1328 Synaptic vesicle prote 100.0 5.1E-25 1.1E-29 256.1 41.3 494 419-1017 365-919 (1103)
4 PF10540 Membr_traf_MHD: Munc1 99.7 8.8E-18 1.9E-22 168.5 10.8 111 906-1016 1-137 (137)
5 PF06046 Sec6: Exocyst complex 98.8 5.8E-08 1.3E-12 117.7 17.4 426 546-1052 77-531 (566)
6 PF04437 RINT1_TIP1: RINT-1 / 96.7 0.18 3.9E-06 61.3 22.9 301 662-1013 131-453 (494)
7 PF04091 Sec15: Exocyst comple 96.7 0.0099 2.2E-07 68.1 11.5 253 695-1009 27-281 (311)
8 COG5173 SEC6 Exocyst complex s 96.4 2.8 6.2E-05 51.1 28.3 444 547-1091 253-737 (742)
9 KOG2180 Late Golgi protein sor 96.2 4.6 0.0001 50.7 29.5 148 656-824 365-521 (793)
10 KOG3543 Ca2+-dependent activat 95.9 0.94 2E-05 55.3 21.7 316 378-723 610-953 (1218)
11 KOG2286 Exocyst complex subuni 95.9 2.4 5.1E-05 53.5 26.0 359 587-1054 248-636 (667)
12 KOG0412 Golgi transport comple 85.6 23 0.00049 44.9 16.3 360 638-1053 401-771 (773)
13 PF06292 DUF1041: Domain of Un 78.0 8.3 0.00018 38.2 7.4 53 580-632 50-104 (106)
14 PF14923 CCDC142: Coiled-coil 74.1 11 0.00025 45.6 8.6 96 898-1003 275-375 (450)
15 PF04100 Vps53_N: Vps53-like, 45.5 6.2E+02 0.013 30.5 17.7 263 396-689 79-383 (383)
16 PF15080 DUF4547: Domain of un 43.8 18 0.00039 38.2 2.6 98 906-1022 70-170 (196)
17 PF12854 PPR_1: PPR repeat 32.3 63 0.0014 25.1 3.5 34 371-408 1-34 (34)
18 PF01031 Dynamin_M: Dynamin ce 32.1 8.1E+02 0.017 27.9 17.3 171 496-682 39-216 (295)
19 PF10474 DUF2451: Protein of u 30.3 5.7E+02 0.012 28.7 11.8 170 796-994 3-184 (234)
20 PF09763 Sec3_C: Exocyst compl 27.5 1.4E+03 0.031 29.4 19.9 200 483-747 385-595 (701)
21 KOG0433 Isoleucyl-tRNA synthet 24.8 2.3E+02 0.0049 36.9 8.1 103 798-943 689-795 (937)
22 PF12896 Apc4: Anaphase-promot 24.2 4.9E+02 0.011 28.0 9.8 83 906-1003 26-123 (210)
23 KOG4654 Uncharacterized conser 23.4 4.2E+02 0.009 29.1 8.6 84 914-999 47-134 (252)
24 PF08385 DHC_N1: Dynein heavy 22.7 9E+02 0.02 29.8 12.9 140 577-722 354-507 (579)
25 KOG2025 Chromosome condensatio 22.4 1.9E+03 0.041 29.0 19.4 256 380-705 22-285 (892)
26 KOG1680 Enoyl-CoA hydratase [L 21.8 32 0.00069 39.4 0.2 38 55-92 57-94 (290)
27 PF03139 AnfG_VnfG: Vanadium/a 21.7 1.1E+02 0.0023 30.8 3.7 63 346-417 35-100 (112)
28 PRK05094 dsDNA-mimic protein; 21.4 67 0.0014 32.0 2.2 21 173-193 5-25 (107)
29 PF10191 COG7: Golgi complex c 21.0 7.4E+02 0.016 32.6 12.0 83 663-749 358-440 (766)
No 1
>PF05664 DUF810: Protein of unknown function (DUF810); InterPro: IPR008528 This family consists of several plant proteins of unknown function.
Probab=100.00 E-value=1.9e-175 Score=1562.12 Aligned_cols=637 Identities=36% Similarity=0.559 Sum_probs=599.6
Q ss_pred CCChHHHHHHHHHHHHHhhhccCCCCCChhhhhccCChhhhhhcccccccc----ccccCCCCCcchHHHHHHh------
Q 037655 174 GLSDDDLRETAYELFLASLLFSGIGDYSAEDKKREKSPKFLTGLKSKKEKI----HLQTHSSGSHSKLIDIVRA------ 243 (1125)
Q Consensus 174 ~ls~ddlRetAYEi~~a~~~~sg~~~~~~~~~~~~~~~s~~k~~lg~~~~~----~~~~~~~~~~~~~~e~mr~------ 243 (1125)
||||||||||||||||||||+||++.++..+++.++ ||+|++||+|++. .++|++++||+|++||||+
T Consensus 1 ~ls~~dlRetAYEi~~a~~~~s~~~~~~~~~~~~~~--s~~k~~lgl~~~~~~~~~~~~~~~~~~~~~~e~~r~qm~vse 78 (677)
T PF05664_consen 1 GLSDDDLRETAYEILLASCRSSGGLIYFSQSKKKEK--SRVKKALGLKSSKSGSSVSSPGRPRRPMTSAEIMRVQMRVSE 78 (677)
T ss_pred CCCHHHHHHHHHHHHHHHHhccCCCccCccccccch--hHHHHHhcCCCCCCCCCCCCCCCCCCcchHHHHHHHHhcccH
Confidence 799999999999999999999987666654433333 8999999998764 5669999999999999999
Q ss_pred -hhHHHHHHHHHHHHHhhcccccchhcchHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCccCcchh----hhHH
Q 037655 244 -LDACIRRNLIQLAATKTRGQVDLPQISLGLLIGIFKSDFLNEKAYIQWKNRQANILEELLSCSTNFTTTEH----LNVR 318 (1125)
Q Consensus 244 -~D~r~R~~L~r~~~gq~g~r~~~~~lpLeLL~~~k~sdF~d~~ey~~Wq~Rql~vLE~gLl~hp~~~~~~~----~~lr 318 (1125)
||+||||+|||+++||+|||+|+|+|||||||++|+|||+|++||++|||||||||||||++||++|++++ ++||
T Consensus 79 ~~d~r~r~~l~~~~~~~~g~r~e~~~lpLeLl~~~~~sdF~d~~ey~~WqkRql~~Le~gL~~hp~~~l~~s~~~a~~lr 158 (677)
T PF05664_consen 79 QMDARIRRALLRAAAGQVGRRAESIVLPLELLQQLKPSDFSDEKEYEQWQKRQLKVLEAGLLNHPSVPLDKSNASAQRLR 158 (677)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccHHHHhhCCHhhCCCHHHHHHHHHHHHHHHHHHHHhCcCCCccccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998 8999
Q ss_pred HHHHHhhhccccccccccCchhhHHHHHHHHHHHhhCCCCCCCCCCCccccccCCCCCHHHHHHHHHhhhcccCcccchH
Q 037655 319 SCLEKIRDTTEWDFKMSASGRVEVLSSIRQVALKLSSLPGQFGIQSETYYWTAAYHLNIRLYEKLLFGMFDVLDECQLIE 398 (1125)
Q Consensus 319 ~~l~~i~~~~~~~~~~~~~~~~e~m~~l~~~~~~La~r~~~~~~~~e~chWadgyPlN~rlY~~LL~~~FD~~de~~l~e 398 (1125)
+++++|++.+.++..++.++|+|+||+||++|++|||||+.+|.++|+||||||||+|+|+|++||++|||++|||+|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~se~~~~l~~~~~~La~r~~~~~~~~e~chWadgyplN~~LYe~LL~~~FD~~de~~vid 238 (677)
T PF05664_consen 159 QIIAKIREDEAEDKPIDTGKNSESMRALRSAVISLAWRPSRDGSSGETCHWADGYPLNVRLYEKLLFSVFDILDEGQVID 238 (677)
T ss_pred HHHHhcccccccCCcCccccccHHHHHHHHHHHHHhcCCCCCCCCCcccccccCCCccHHHHHHHHHHHhcccccchHHh
Confidence 99999888886666655557799999999999999999988999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHhhcccCchhhHHHHHHHhhccCCCcccCcccccchhhhhhhcccCCc
Q 037655 399 EADAIMSLIKLTWPTLGITQKMHYGIFAWVLFQQFVGTGEGMLLEYAVLELQKVSPTEEDDGKEVQYINNIICSRKLNDR 478 (1125)
Q Consensus 399 E~dElLelik~tW~iLgit~~~Hnvcf~wVlF~qyV~tge~dlL~aA~~~l~ev~~d~~~~~~~~~y~~~l~~~~~~~~t 478 (1125)
|+||+||+||+||++|||||++||+||+||+|+|||+|||++||++|+++|++|+.|+++.++++.|++||+|+. +
T Consensus 239 E~dEvlellK~tW~~LGIt~~lHn~cf~WVlF~qyv~tge~~LL~~a~~~L~ev~~d~~~~~~~~~y~~sl~~~~----~ 314 (677)
T PF05664_consen 239 EVDEVLELLKKTWSILGITQTLHNVCFAWVLFRQYVATGEPDLLKAAIQQLQEVAKDAKRATKDPLYLKSLRCSV----E 314 (677)
T ss_pred hHHHHHHHHHHHhHHhCCCHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhccccccchhhhhhhhccc----c
Confidence 999999999999999999999999999999999999999999999999999999999987899999999999865 7
Q ss_pred cccHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCc-chhhHHHHHHHHhhhcCCCchhhhhhccCccchHHHHHHHHHHHH
Q 037655 479 KDNLSLLQAIFVSISIWCDSKLQDYHRHFSQEPS-NFKRVMALASTVGVFTPGDCAEIKLTKLHTSNDNAARKVKGYVEK 557 (1125)
Q Consensus 479 ~~d~~ll~s~LssI~~w~~krL~dyH~~f~~~~~-~me~i~~v~~~~~~il~eD~~~~~~~~~~~~~~~~~~~vd~yIrs 557 (1125)
..++++|+++|++|++|++|||+|||+||+.|+. .|+++++|++.+++|+++|++.+++.+.+ ..++++|+.|||+
T Consensus 315 ~~~l~ll~s~L~si~~W~ekrL~dYH~~f~~~~~~~me~llsl~~~a~~il~ed~~~~~~~~~~---~~~~~~ie~YIrs 391 (677)
T PF05664_consen 315 TSDLSLLSSVLSSIQGWAEKRLLDYHDHFSEGNIGVMEGLLSLAVSAAKILGEDVSREYRRKRS---KVARSRIESYIRS 391 (677)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHHHhhchhHHHHhhhc---cchHHHHHHHHHH
Confidence 7899999999999999999999999999999997 59999999999999999999887653221 2789999999999
Q ss_pred HHHHHHHHHhhcccccccccCchHHHHHHHHHHHHHHHHhhhccchhhhhccchhhHhHHHHHHHHHhhhHHHHhhhhhc
Q 037655 558 SIETACRQVASTIDLESKVQRSHPLALLANELRSIAERELTVFWPAICHWCSEALTISAIMLHHFYREILKPFLQGVTSL 637 (1125)
Q Consensus 558 S~~~af~~~le~~~~~~~~e~~~vL~~Lak~i~~La~ke~~~fSPiL~rwhP~a~~Vaa~~Lh~~yg~~Lk~fl~~v~~l 637 (1125)
|+++||++..+..++..+.++.|+|++||++|++||.+|+++|||+|++|||++++|||++||.|||++||+|++++++|
T Consensus 392 Si~~Af~~~~~~~~~~~~~~~~~~L~~LA~ei~~la~~e~~~FsPiLk~whP~a~~VAa~~LH~~Yg~~Lk~~L~~~~~L 471 (677)
T PF05664_consen 392 SIKAAFARMASSVDSRSDSEPSHVLAQLAKEIKELAKKEKEVFSPILKRWHPNAAGVAAATLHSCYGNELKQFLSGVTHL 471 (677)
T ss_pred HHHHHHHhhhhhhhhcccccchHHHHHHHHHHHHHHHHhHHhcCchhcccCchHHHHHHHHHHHHHHHHHHHHHcccccC
Confidence 99999999998888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHhhhhhcCC----------------------CCcccccccHHHHHHHHHHHHHHHHHHHHhhhccCCcccCCCC
Q 037655 638 SEDARLVLSAANKMF----------------------LFGQIGEVCRPIILDWLIAQHAHILEWTGRAFDLEDWEPLSFQ 695 (1125)
Q Consensus 638 t~d~~~VL~aAd~LE----------------------~Pf~iE~~~~~~V~~Wi~~~~~ki~ewV~rAiq~E~W~P~s~~ 695 (1125)
|+++++||++|++|| +||+||+++.+||++||+++.+++.+||+||+++|+|+|++++
T Consensus 472 T~d~v~VL~aA~~LEk~Lvq~~~~~~edggk~~~rem~Py~vE~~i~~lv~~Wi~~~~~~l~ewv~ra~~qE~W~P~S~~ 551 (677)
T PF05664_consen 472 TPDVVEVLQAADKLEKALVQMVSVDCEDGGKSLIREMPPYEVESLISNLVKRWIQEQLERLNEWVDRAIKQEKWNPRSKE 551 (677)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcCCCC
Confidence 999999999999997 8999999999999999999999999999999999999999999
Q ss_pred ccCcccHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCchhhhhhh--hH
Q 037655 696 QRQGASIIEVFRIIEETVDQFFGMNLPLDIIHLQALLSIIFHSLDAYLQRLLNQLVEQKHLYPSAPPLTRYEETVL--PM 773 (1125)
Q Consensus 696 e~hSsSVVDIFrm~~Etvd~ffqL~wp~~a~lL~aLs~Gid~~lq~Y~~~v~~~cgske~liP~~P~LTR~~~e~~--~f 773 (1125)
++||+|||||||||+||||+||+|+||+++.+|++|++||+++||+||++++++||++++++|++|+||||+++++ .+
T Consensus 552 e~hs~SvVEvfri~~eTvd~ff~L~~~~~~~~l~~L~~gld~~lq~Y~~~v~~~~gsk~~liP~~P~LTR~~~~sk~~~~ 631 (677)
T PF05664_consen 552 ERHSPSVVEVFRIFNETVDQFFQLPWPMHADFLQALSKGLDKALQRYCEKVEQSCGSKQSLIPPLPPLTRCKKDSKFKKL 631 (677)
T ss_pred CCCcchHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCchhhhhhhhhhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999864 46
Q ss_pred HHhhcccccccccccccccccccccceeeeeccHHHHHHHHHHHHH
Q 037655 774 LKKKLLEFTVLDKSVSEKLNELTIPKLCIRLNTLQYIQKQVSVLEE 819 (1125)
Q Consensus 774 ~Kkkv~~~~~P~~~~~~~~~~~~~~~LCVrLNNLeyi~~qLd~LEk 819 (1125)
|||+..++..+.++...+.+++++|++|||||||||+++||++|||
T Consensus 632 ~Kk~~~~~~~~~~~~~~~~~~~~~~~lcVrLNtL~yil~qL~~LEK 677 (677)
T PF05664_consen 632 WKKKWKSSTNPDERFSSKINSQFTPRLCVRLNTLEYILSQLDKLEK 677 (677)
T ss_pred HHHHhcCccccccccccCcccCccCceeeeecHHHHHHHHHHhhcC
Confidence 8888877666666655544578899999999999999999999986
No 2
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=3.7e-26 Score=261.96 Aligned_cols=526 Identities=15% Similarity=0.239 Sum_probs=370.2
Q ss_pred cchHHHHHHHHHHHhhCCCCCCChhh-HHHHHHHHHHHhhcccCchhhHHHHHHHhhccCCC--cccC--cccccchhhh
Q 037655 395 QLIEEADAIMSLIKLTWPTLGITQKM-HYGIFAWVLFQQFVGTGEGMLLEYAVLELQKVSPT--EEDD--GKEVQYINNI 469 (1125)
Q Consensus 395 ~l~eE~dElLelik~tW~iLgit~~~-Hnvcf~wVlF~qyV~tge~dlL~aA~~~l~ev~~d--~~~~--~~~~~y~~~l 469 (1125)
.+-|-..|+.++..-++.|-.|.|.+ |-.| |-.+|..-|-|-.+..-+.-++---.. +..+ ..+++- .
T Consensus 469 ~fdetaqeivdefamrygiesiyqamthfac----l~skymcpgvpavmstllaninayyahttastnvsasdrfa-a-- 541 (1283)
T KOG1011|consen 469 YFDETAQEIVDEFAMRYGIESIYQAMTHFAC----LSSKYMCPGVPAVMSTLLANINAYYAHTTASTNVSASDRFA-A-- 541 (1283)
T ss_pred hhhhhHHHHHHHHHHHHhHHHHHHHHHHHHH----HhhcccCCCcHHHHHHHHHhhhHHhhccccccccCcchhhh-h--
Confidence 45566789999999999999998754 6666 568999999655554444333211110 0000 001100 0
Q ss_pred hhhcccC-CccccHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCcc-hhhHHHHHHHHhhhcCCCchhhhhhcc--Cccch
Q 037655 470 ICSRKLN-DRKDNLSLLQAIFVSISIWCDSKLQDYHRHFSQEPSN-FKRVMALASTVGVFTPGDCAEIKLTKL--HTSND 545 (1125)
Q Consensus 470 ~~~~~~~-~t~~d~~ll~s~LssI~~w~~krL~dyH~~f~~~~~~-me~i~~v~~~~~~il~eD~~~~~~~~~--~~~~~ 545 (1125)
.+ +.. -.-..|.-+|..+.=.|..|..+|+.+.|. .+.+-+-+=++.-| +|-. .+- -.+--
T Consensus 542 -----snfgke----rfvklldqlhnslridls~yrnnfpassperlqdlkstvdlltsi-----tffr-mkvqelqspp 606 (1283)
T KOG1011|consen 542 -----SNFGKE----RFVKLLDQLHNSLRIDLSAYRNNFPASSPERLQDLKSTVDLLTSI-----TFFR-MKVQELQSPP 606 (1283)
T ss_pred -----hcccHH----HHHHHHHHHhhhheeeHHHHhcCCCCCCHHHHHHHHHHHHHHHHH-----HHHH-HHHHHhcCCC
Confidence 00 111 223456778888888999999999988773 44443333222222 1110 000 00112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc----cccccc-cCchHHHHHHHHHHHHHHHHhhhccchhhhhccc---hhhHhHH
Q 037655 546 NAARKVKGYVEKSIETACRQVASTI----DLESKV-QRSHPLALLANELRSIAERELTVFWPAICHWCSE---ALTISAI 617 (1125)
Q Consensus 546 ~~~~~vd~yIrsS~~~af~~~le~~----~~~~~~-e~~~vL~~Lak~i~~La~ke~~~fSPiL~rwhP~---a~~Vaa~ 617 (1125)
.+.+-|.+++..-+...|.-+.++. .|.... +|-.- |..-|..+.+.+++.|.|.|.+. |+ .+-++|-
T Consensus 607 rasqvvkdcvkaclnstye~ifnnchelys~s~~nldfw~k---lit~ivsiieedknsytp~lnqf-pqelnvgk~sae 682 (1283)
T KOG1011|consen 607 RASQVVKDCVKACLNSTYEYIFNNCHELYSPSITNLDFWYK---LITLIVSIIEEDKNSYTPALNQF-PQELNVGKLSAE 682 (1283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccchhhHHH---HHHHHHHHHHhccccCChhhhhC-hhhhccccchHH
Confidence 4566677777777777777666553 333333 44443 44446666778999999999764 32 6778889
Q ss_pred HHHHHHHhhhHHHHhhhhhccHHHHHHhhhhhcCC---------------------CCcccccccHHHHHHHHHHHHHHH
Q 037655 618 MLHHFYREILKPFLQGVTSLSEDARLVLSAANKMF---------------------LFGQIGEVCRPIILDWLIAQHAHI 676 (1125)
Q Consensus 618 ~Lh~~yg~~Lk~fl~~v~~lt~d~~~VL~aAd~LE---------------------~Pf~iE~~~~~~V~~Wi~~~~~ki 676 (1125)
++-.+|.+++|--++.-. ....-..|+-+. .-.+--.||.|||.+|+++..+.-
T Consensus 683 vmw~lfaqdmk~aleeh~-----k~~~cksadymnl~fkvk~ly~eyv~dlp~~k~~vpeypawf~pfv~qwldenee~s 757 (1283)
T KOG1011|consen 683 VMWSLFAQDMKYALEEHA-----KKKLCKSADYMNLHFKVKWLYNEYVADLPTYKSSVPEYPAWFEPFVMQWLDENEEVS 757 (1283)
T ss_pred HHHHHHHHHHHHHHHHHh-----hhccccCcchhheeeehhhhHHHHHhhchhhhccCCCchHHHHHHHHHHhccchHHH
Confidence 999999999998665432 112223333111 111344799999999999999999
Q ss_pred HHHHHhhhcc---CCcccCCCCccCcccHHHHHHHHHHHHHHHHcCCCC---ccHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 037655 677 LEWTGRAFDL---EDWEPLSFQQRQGASIIEVFRIIEETVDQFFGMNLP---LDIIHLQALLSIIFHSLDAYLQRLLNQL 750 (1125)
Q Consensus 677 ~ewV~rAiq~---E~W~P~s~~e~hSsSVVDIFrm~~Etvd~ffqL~wp---~~a~lL~aLs~Gid~~lq~Y~~~v~~~c 750 (1125)
.+++..|++. |.|.-.+++..||.||||+|.-+|++++.+.+|++| +-+.+|+.|+++|.+.+.+|+..+..-|
T Consensus 758 ~dflrga~e~dkkdgf~qtseha~fs~svvdvftqlnqsfeiikklecpdp~i~ah~mrrfakti~kvllqyadivskdf 837 (1283)
T KOG1011|consen 758 MDFLRGALERDKKDGFQQTSEHALFSCSVVDVFTQLNQSFEIIKKLECPDPEIAAHYMRRFAKTINKVLLQYADIVSKDF 837 (1283)
T ss_pred HHHHHhHhhcccccCccccchhhhhcchHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999975 478888999999999999999999999999999999 5568999999999999999999974433
Q ss_pred hhccccCCCCCCCchhhhhhhhHHHhhcccccccccccccccccccccceeeeeccHHHHHHHHHHHHHHHHhhhcccCC
Q 037655 751 VEQKHLYPSAPPLTRYEETVLPMLKKKLLEFTVLDKSVSEKLNELTIPKLCIRLNTLQYIQKQVSVLEEGIRKSWALVGP 830 (1125)
Q Consensus 751 gske~liP~~P~LTR~~~e~~~f~Kkkv~~~~~P~~~~~~~~~~~~~~~LCVrLNNLeyi~~qLd~LEk~I~~~w~~~~~ 830 (1125)
. + | |. |+ .--|+.+||++.++.||+++.+.+-..
T Consensus 838 p-~--y---------~~-------ke---------------------klpcilmnnvqqlrvqlekmfeamggk------ 871 (1283)
T KOG1011|consen 838 P-K--Y---------CH-------KE---------------------KLPCILMNNVQQLRVQLEKMFEAMGGK------ 871 (1283)
T ss_pred h-h--h---------hh-------hc---------------------cCCeeeeccHHHHHHHHHHHHHHhcch------
Confidence 1 0 1 11 21 226999999999999999998876221
Q ss_pred ccccccccccchhhhhhhcccCchhhhhHHHhHHHHHHHHHHHHHHHHHhhhhceee------eeccchhhhh----hcc
Q 037655 831 AVDQASAEGETEESLERNFLTSSEAVDELFITTLNIIRDTATGAIRKICDFIGARVV------FWDLRDSFLC----CLY 900 (1125)
Q Consensus 831 ~~~l~~a~~~t~~s~~~~l~~~~~~~~~~~~~~F~~ar~a~~~aI~~l~e~ia~rlV------F~Dlr~~~~d----~LY 900 (1125)
+ | +..........|..++..+|.|+.+++..+. ...|.+.+.. ++-
T Consensus 872 -e----------------l-------d~ea~d~lk~lqvkln~vldels~~f~tsfqphi~e~v~qmg~il~qvkgt~~a 927 (1283)
T KOG1011|consen 872 -E----------------L-------DEEAGDVLKELQVKLNSVLDELSAVFVTSFQPHIHECVIQMGDILVQVKGTGLA 927 (1283)
T ss_pred -h----------------h-------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccHHHHHHHHHHHHhhhcccccc
Confidence 1 1 2234566677788888888888877766532 1133333322 233
Q ss_pred cccch---hhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHh-------------------------
Q 037655 901 RGSVE---SARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYVWVLL------------------------- 952 (1125)
Q Consensus 901 vg~Vs---~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VLL------------------------- 952 (1125)
...|+ ++.++|+|+.||.+|...+..+.+++..+|++++||-.+..+...+.
T Consensus 928 ~~sva~dad~vl~plmdlldgnlt~fa~~cektvlk~vlkelwkivm~tmek~ivlppltdqt~~~~l~~~ki~~~t~~t 1007 (1283)
T KOG1011|consen 928 KTSVAQDADAVLEPLMDLLDGNLTLFADQCEKTVLKRVLKELWKIVMNTMEKRIVLPPLTDQTLLKQLPNAKIGDVTKLT 1007 (1283)
T ss_pred hhhcccchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeecCCCcchhHHhccccccccchhhHH
Confidence 33344 67799999999999999999999999999999999999866654332
Q ss_pred -------------------cCCCCCCCChhHHHHHHHHHHHHHHhhhcCCCCCcHHHHHHH--HHHHHHHHhhhcccHHH
Q 037655 953 -------------------DGGPSRAFSNSDITMMEDDLNTLKEFFIAGGEGLPRSLVERE--AKYAEEILGLFTLQSET 1011 (1125)
Q Consensus 953 -------------------~GGpsR~Fs~~D~~~lEeDL~~Lk~fF~A~GEGLp~elVe~~--~~~v~~vL~L~~~~Te~ 1011 (1125)
.....|.++++++..++-.|..+|++|||+|-||...++|+. .+.++..|.||.+.|++
T Consensus 1008 q~~f~aak~l~lsk~k~hmvree~ksltpkqcavld~aldtikq~fhagg~glkktflekspdlqslryalslytqttd~ 1087 (1283)
T KOG1011|consen 1008 QTIFQAAKELNLSKLKDHMVREEEKSLTPKQCAVLDLALDTIKQYFHAGGKGLKKTFLEKSPDLQSLRYALSLYTQTTDQ 1087 (1283)
T ss_pred HHHHHHHHhcchhhHHHHHHHHHhccCCccceehhhhhHHHHHHHHhccCcchhhhHhhcCccHHHHHHHHHHHHhHHHH
Confidence 011248999999999999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHhhh
Q 037655 1012 LIRMLMSASE 1021 (1125)
Q Consensus 1012 LIe~f~~a~~ 1021 (1125)
||..|.+.-.
T Consensus 1088 liktfv~sq~ 1097 (1283)
T KOG1011|consen 1088 LIKTFVTSQR 1097 (1283)
T ss_pred HHHHHHHhhh
Confidence 9999986653
No 3
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95 E-value=5.1e-25 Score=256.11 Aligned_cols=494 Identities=15% Similarity=0.168 Sum_probs=337.4
Q ss_pred hhHHHHHHHHHHHhhcccC--chhhHHHHHHHhhc-cCCCcccCcccccchhhhhhhcccCCccccHHHHHHHHHHHHHH
Q 037655 419 KMHYGIFAWVLFQQFVGTG--EGMLLEYAVLELQK-VSPTEEDDGKEVQYINNIICSRKLNDRKDNLSLLQAIFVSISIW 495 (1125)
Q Consensus 419 ~~Hnvcf~wVlF~qyV~tg--e~dlL~aA~~~l~e-v~~d~~~~~~~~~y~~~l~~~~~~~~t~~d~~ll~s~LssI~~w 495 (1125)
.+|..+--|+.|.+-..|- ++.+|...++-+.+ -..-. .-++| .=..|...+++..+.
T Consensus 365 dlhlAm~rw~a~~~~~~s~~ld~s~L~~lL~di~~~W~~~~-qL~~e------------------~E~~LaDs~s~F~e~ 425 (1103)
T KOG1328|consen 365 DLHLAMCRWLAFHSMIHSIDLDFSLLYKLLQDIIDKWQPLT-QLDKE------------------EEDMLADSFSSFDEY 425 (1103)
T ss_pred HHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhhcCcc-cCCHH------------------HHHHHHHHHHHHHHH
Confidence 6799999999999998855 66666555443321 11100 00111 112677788999999
Q ss_pred HHHHHhHHhhhcCCCCcc----hhhHHHHHHHHhhhcCCCchhhhhhccCccchHHHHHHHHHHHHHHHHHHHHHhhccc
Q 037655 496 CDSKLQDYHRHFSQEPSN----FKRVMALASTVGVFTPGDCAEIKLTKLHTSNDNAARKVKGYVEKSIETACRQVASTID 571 (1125)
Q Consensus 496 ~~krL~dyH~~f~~~~~~----me~i~~v~~~~~~il~eD~~~~~~~~~~~~~~~~~~~vd~yIrsS~~~af~~~le~~~ 571 (1125)
+++.+-..-++|+..++. +|.++-.+ +.+-...+.+.+- + =...+...|...++.+...-|+++++...
T Consensus 426 ~l~~~r~hRd~Fpa~n~~s~~rle~LlkCl---g~L~~~~~~~~~c--P--f~~~~~~~~~~al~kg~~~w~dr~~~~~q 498 (1103)
T KOG1328|consen 426 CLRMMREHRDKFPASNRNSGERLESLLKCL---GALRESPFYQKYC--P--FKRPFHAHLESALVKGAEDWIDRSIESVQ 498 (1103)
T ss_pred HHHHHHHHHhhCCCCCCchHHHHHHHHHHH---HHHhcCcchHhhC--C--CCccchHHHHHHHHhhhHHHHHHHHhccC
Confidence 999999888889988773 44444333 3322222223221 1 12357888999999999999999998765
Q ss_pred ccccccCchHHHHHHHHH-HHHHHHHhhhccchhhhhccchhhHhHHHHHHHHHhhhHHHHhhhhh-ccHHHHH----H-
Q 037655 572 LESKVQRSHPLALLANEL-RSIAERELTVFWPAICHWCSEALTISAIMLHHFYREILKPFLQGVTS-LSEDARL----V- 644 (1125)
Q Consensus 572 ~~~~~e~~~vL~~Lak~i-~~La~ke~~~fSPiL~rwhP~a~~Vaa~~Lh~~yg~~Lk~fl~~v~~-lt~d~~~----V- 644 (1125)
+.. .+. |+.++-.| .+++.. ...|.-+++. +.+|-- |.-.++||-.-+.+ ++.+... .
T Consensus 499 ~~~--~p~--l~~~~~~i~~d~q~~-~~~Yaalf~~----v~~idy------f~lt~~q~drlv~Ee~~s~~~~~~~~~~ 563 (1103)
T KOG1328|consen 499 DPD--PPK--LLLQLLNIVNDQQSR-FLHYAALFRE----VARIDY------FQLTLNQFDRLVTEELTSELMSEKKMDL 563 (1103)
T ss_pred CCC--Cch--hHHHHHHHHHHHHHH-HHHHHHHHHH----hhccce------eeeeHHHHHHHHHHHHHHHHhchhhhhh
Confidence 331 111 23333333 333222 2234333321 222222 22234555444322 1111100 0
Q ss_pred -----hhhhhcCC---------------------------C---CcccccccHHHHHHHHHHHHHHHHHHHHhhhccCCc
Q 037655 645 -----LSAANKMF---------------------------L---FGQIGEVCRPIILDWLIAQHAHILEWTGRAFDLEDW 689 (1125)
Q Consensus 645 -----L~aAd~LE---------------------------~---Pf~iE~~~~~~V~~Wi~~~~~ki~ewV~rAiq~E~W 689 (1125)
|-+++..+ . -=+...+|.|-|++|++-..+|....|+-|++.|.-
T Consensus 564 ~sq~~ls~~~~~pv~~~lfeL~l~l~~f~~l~~~~~a~~~r~lals~~ha~F~p~ik~w~~V~k~kAl~Rv~~a~~mD~~ 643 (1103)
T KOG1328|consen 564 KSQMRLSAAQDPPVEDDLFELMLILMAFVELRNYRLANRVRVLALSEWHAIFNPGIKKWLEVAKEKALARVHLACQMDMP 643 (1103)
T ss_pred hhhhhcccccCCCccccHHHHHHHHHHHHHHHhhcccCCCcchhhhcchhhhhHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 11122111 1 225678899999999999999999999999999999
Q ss_pred ccCCCCccCcccHHHHHHHHHHHHHHHHcCCCCccH---HHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCchh
Q 037655 690 EPLSFQQRQGASIIEVFRIIEETVDQFFGMNLPLDI---IHLQALLSIIFHSLDAYLQRLLNQLVEQKHLYPSAPPLTRY 766 (1125)
Q Consensus 690 ~P~s~~e~hSsSVVDIFrm~~Etvd~ffqL~wp~~a---~lL~aLs~Gid~~lq~Y~~~v~~~cgske~liP~~P~LTR~ 766 (1125)
.|.+...|||+|.+|+=.++.++-+.|..|+||... .+=+-|.+-+..+.-.||+.+...-|..+ +
T Consensus 644 ~~~~~~~RhSSS~~d~~~~l~~i~efW~rl~wpD~~~ai~~~~QL~dvVCea~~~Yt~li~sa~~dtq-----------~ 712 (1103)
T KOG1328|consen 644 ISTSSDMRHSSSHIDICHILEQITEFWERLDWPDAGLAIEYTRQLVDVVCEAVTVYTQLIISAEGDTQ-----------E 712 (1103)
T ss_pred cccchhhccccchhhHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----------h
Confidence 999999999999999999999999999999999433 33377888888889999998865433222 1
Q ss_pred hhhhhhHHHhhcccccccccccccccccccccceeeeeccHHHHHHHHHHHHHHHHhhhcccCCccccccccccchhhhh
Q 037655 767 EETVLPMLKKKLLEFTVLDKSVSEKLNELTIPKLCIRLNTLQYIQKQVSVLEEGIRKSWALVGPAVDQASAEGETEESLE 846 (1125)
Q Consensus 767 ~~e~~~f~Kkkv~~~~~P~~~~~~~~~~~~~~~LCVrLNNLeyi~~qLd~LEk~I~~~w~~~~~~~~l~~a~~~t~~s~~ 846 (1125)
-+ .+ .| ++...-+||.+||+||++.-++.-+|.. .|...+-+. .+- ++
T Consensus 713 ~~---a~---------~p---------~~~s~~lCv~iNNvE~VRrsl~~~~k~~--~~p~~~~~~-----~~~----l~ 760 (1103)
T KOG1328|consen 713 LQ---AF---------IP---------SQLSHLLCVAINNVEQVRRSLNITEKLH--MDPRSRLNG-----NHM----LK 760 (1103)
T ss_pred hh---hc---------Ch---------HHHHHHHHHHHccHHHHHHHHhHHhhhc--cCcccccCc-----ccc----Cc
Confidence 11 01 01 1334669999999999999999888854 554321100 000 12
Q ss_pred hhcccCchhhhhHHHhHHHHHHHHHHHHHHHHHhhhhceeeeeccchhhhhhcccccch--------hhhHHHhHHHHHH
Q 037655 847 RNFLTSSEAVDELFITTLNIIRDTATGAIRKICDFIGARVVFWDLRDSFLCCLYRGSVE--------SARLESFLTHIDT 918 (1125)
Q Consensus 847 ~~l~~~~~~~~~~~~~~F~~ar~a~~~aI~~l~e~ia~rlVF~Dlr~~~~d~LYvg~Vs--------~~RIeplL~~Ld~ 918 (1125)
+.+ ...+++.-+...+.|.+-+.+|++ |++ .+|++ |+.+++ ++.|.||++|||-
T Consensus 761 ~~~-------~n~les~~~~~~~e~~ri~~~Lt~----~m~-~~~~K------~vfHlawSPds~~~~~a~~PL~~yLD~ 822 (1103)
T KOG1328|consen 761 SEI-------ENRLESCESNICSEIDRIVGLLTE----RML-PQMKK------HVFHLAWSPDSQLVEDALKPLTDYLDI 822 (1103)
T ss_pred hHH-------HHHHHHHHHHHHHHHHHHHHHhhH----Hhh-HHHHH------HHHheecCccccchhhhHHHHHHHHHH
Confidence 111 224566667777888888888888 777 79998 665544 7789999999999
Q ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHhhhcCCCCCcHHHH-HHHHHH
Q 037655 919 VLDHICSLIDDSLRDFVVLSICRASLEGYVWVLLDGGPSRAFSNSDITMMEDDLNTLKEFFIAGGEGLPRSLV-EREAKY 997 (1125)
Q Consensus 919 ~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VLL~GGpsR~Fs~~D~~~lEeDL~~Lk~fF~A~GEGLp~elV-e~~~~~ 997 (1125)
.|+.++++|..++.+||+..+|+-.+..+ .-.-|.++...+.++.++.+.++.|.+||||+|+||+.|-+ ++.+.+
T Consensus 823 ~La~ln~~Ll~~Nf~Rvl~a~w~~vl~~l---~~~~g~n~d~~~~Fy~Rl~eal~~Lv~FFHAeGqGL~le~L~t~~~~r 899 (1103)
T KOG1328|consen 823 ELASLNKNLLHRNFLRVLSAQWSIVLKLL---RECVGENVDMEPAFYHRLFEALHVLVEFFHAEGQGLSLEALDTNPEHR 899 (1103)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHH---HHHhcccCCCChHHHHHHHHHHHHHHHHHhccCCCcchHhhccCcHHH
Confidence 99999999999999999977777766655 23478999999999999999999999999999999965554 555999
Q ss_pred HHHHHhhhcccHHHHHHHHH
Q 037655 998 AEEILGLFTLQSETLIRMLM 1017 (1125)
Q Consensus 998 v~~vL~L~~~~Te~LIe~f~ 1017 (1125)
++++|.|+.++|++|||+|-
T Consensus 900 l~~~L~lhkt~T~~lIe~fY 919 (1103)
T KOG1328|consen 900 LVKILSLHKTPTEQLIEKFY 919 (1103)
T ss_pred HHHHHHhcCCCHHHHHHHHH
Confidence 99999999999999999983
No 4
>PF10540 Membr_traf_MHD: Munc13 (mammalian uncoordinated) homology domain; InterPro: IPR019558 Mammalian uncoordinated homology 13 (Munc13) proteins constitute a family of three highly homologous molecules (Munc13-1, Munc13-2 and Munc13-3) with homology to Caenorhabditis elegans unc-13p. Munc13 proteins contain a phorbol ester-binding C1 domain and two C2 domains, which are Ca2+/phospholipid binding domains. Sequence analyses have uncovered two regions called Munc13 homology domains 1 (MHD1) and 2 (MHD2) that are arranged between two flanking C2 domains. MHD1 and MHD2 domains are present in a wide variety of proteins from Arabidopsis thaliana (Mouse-ear cress), C. elegans, Drosophila melanogaster (Fruit fly), Mus musculus (Mouse), Rattus norvegicus (Rat) and Homo sapiens (Human), some of which may function in a Munc13-like manner to regulate membrane trafficking. The MHD1 and MHD2 domains are predicted to be alpha-helical. ; PDB: 3SWH_A.
Probab=99.73 E-value=8.8e-18 Score=168.51 Aligned_cols=111 Identities=26% Similarity=0.403 Sum_probs=81.0
Q ss_pred hhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHH-h---c--------------------CCCCCCCC
Q 037655 906 SARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYVWVL-L---D--------------------GGPSRAFS 961 (1125)
Q Consensus 906 ~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VL-L---~--------------------GGpsR~Fs 961 (1125)
++.|.|||+|||.+|..+++.|.+++..+|+.++|+.++..+.-.+ + . +|..|.++
T Consensus 1 e~ai~PL~dyLd~nL~~L~~~L~~~~f~~vl~~lW~~vl~~l~~llvlP~ls~~~~~~~~~~~~~~~~~~~~~~~~~~Lt 80 (137)
T PF10540_consen 1 EDAIEPLMDYLDSNLSILASNLEKENFKRVLKELWKVVLETLEELLVLPPLSDKPMLGLLQSAVSSLSSHGIGGSQRPLT 80 (137)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHTTS-G------------GG-TTS------------
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHHHhhcccccCCCCC
Confidence 4689999999999999999999999999999999999998887777 3 2 36779999
Q ss_pred hhHHHHHHHHHHHHHHhhhcCCCCCcHHHH--HHHHHHHHHHHhhhcccHHHHHHHH
Q 037655 962 NSDITMMEDDLNTLKEFFIAGGEGLPRSLV--EREAKYAEEILGLFTLQSETLIRML 1016 (1125)
Q Consensus 962 ~~D~~~lEeDL~~Lk~fF~A~GEGLp~elV--e~~~~~v~~vL~L~~~~Te~LIe~f 1016 (1125)
+.++++++.+|+.|++||||+|+|||.+.+ ...|+.++.++.||+++|++||++|
T Consensus 81 ~~q~~~l~~~L~~L~~FFhA~G~Gl~~~~L~ks~~yq~L~~~l~ly~~sT~~LI~~f 137 (137)
T PF10540_consen 81 PKQCDRLFKWLDTLKDFFHAEGNGLPLEFLEKSPEYQSLRYILSLYDQSTDELIEEF 137 (137)
T ss_dssp -TCHHHHHHHHHHHHHHHHCCCTS--HHHHHC-HHHHHHHHHHHHT-----------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCHHHHccCHHHHHHHHHHHHhcCCHHHHHhhC
Confidence 999999999999999999999999999999 3349999999999999999999987
No 5
>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex. Sec6 interacts with Sec8, Sec10 and Exo70.These exocyst proteins localise to regions of active exocytosis-at the growing ends of interphase cells and in the medial region of cells undergoing cytokinesis-in an F-actin-dependent and exocytosis- independent manner [].; PDB: 2FJI_2.
Probab=98.83 E-value=5.8e-08 Score=117.70 Aligned_cols=426 Identities=16% Similarity=0.165 Sum_probs=211.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccCchHHHHHHHHHHHHHHHHhhhccchhh-hhccchhhHhHHHHHHHHH
Q 037655 546 NAARKVKGYVEKSIETACRQVASTIDLESKVQRSHPLALLANELRSIAERELTVFWPAIC-HWCSEALTISAIMLHHFYR 624 (1125)
Q Consensus 546 ~~~~~vd~yIrsS~~~af~~~le~~~~~~~~e~~~vL~~Lak~i~~La~ke~~~fSPiL~-rwhP~a~~Vaa~~Lh~~yg 624 (1125)
..++++-+.|+.|+.+.|.+..+... .+......|..|..-..+|. ..+..-.|.+= .|+ +-.+-+...|.+++
T Consensus 77 ~~r~~~~~~l~~sv~~~~~~~~~~~~--~~~~l~~~l~~l~~~~~DL~-~v~~~~~~cfPp~~~--I~~~y~~~YH~~l~ 151 (566)
T PF06046_consen 77 NWRQKFFEALRESVEERFEQAEEREE--NKSWLARHLEALRWVLEDLQ-VVKDDVVPCFPPEYD--IFNTYVSMYHNALS 151 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcc--CchHHHHHHHHHHHHHHHHH-HHHHhCcccCCCCCh--HHHHHHHHHHHHHH
Confidence 35677777888888888883333221 11122223344442222222 12222233332 355 66666667777777
Q ss_pred hhhHHHHhhhhhcc-HHHHHHhhhhh----cCC----------CCcccccccHHHHHHHHHHHHHHHHHHHHhhhccCC-
Q 037655 625 EILKPFLQGVTSLS-EDARLVLSAAN----KMF----------LFGQIGEVCRPIILDWLIAQHAHILEWTGRAFDLED- 688 (1125)
Q Consensus 625 ~~Lk~fl~~v~~lt-~d~~~VL~aAd----~LE----------~Pf~iE~~~~~~V~~Wi~~~~~ki~ewV~rAiq~E~- 688 (1125)
..|..+... .+. .++..+|.=.+ .+. .|.=.++....++..++.....++.+|+++++++|.
T Consensus 152 ~~l~~l~~~--~l~~~~ll~ll~W~~~Y~~~m~~~~l~~~~~l~plL~~~~~~~L~~~Yl~~~~~~~~eW~~n~l~~E~~ 229 (566)
T PF06046_consen 152 DHLQELISP--DLEANDLLSLLSWVNTYPSIMGHPDLAIKEQLGPLLPDEKLEELEDDYLSRIQKKMKEWMDNILEQEVK 229 (566)
T ss_dssp ------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccC--CCCHHHHhhheechhhChHhhcCCcccchhhccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777765222 122 34555553322 111 233345566889999999999999999999999984
Q ss_pred -c----ccCC--CCccCcccHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCC
Q 037655 689 -W----EPLS--FQQRQGASIIEVFRIIEETVDQFFGMNLPLDIIHLQALLSIIFHSLDAYLQRLLNQLVEQKHLYPSAP 761 (1125)
Q Consensus 689 -W----~P~s--~~e~hSsSVVDIFrm~~Etvd~ffqL~wp~~a~lL~aLs~Gid~~lq~Y~~~v~~~cgske~liP~~P 761 (1125)
| +|.. +..-|++..+|||+|++|.++.... .....++......+.+.+..|-....... .++
T Consensus 230 ~w~~~~~Pe~~~dg~y~t~~~~difqmi~qql~va~~---~l~~~v~~~v~~~~~~~l~~~~~~~~~~~-~~~------- 298 (566)
T PF06046_consen 230 DWSEEKEPEEDEDGYYHTPLPVDIFQMINQQLDVASE---SLQGKVLQRVLEELANFLKSYQDAWQEFK-EEH------- 298 (566)
T ss_dssp HHHC-S--EE-TTS-EE-HHHHHHHHHHHHHHHHHHH---TT-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-------
T ss_pred HhcccCCCCcCCCCCeecCcHHHHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHH-------
Confidence 3 4442 3345788999999999999999811 14556667777777777777776664443 111
Q ss_pred CCchhhhhhhhHHHhhcccccccccccccccccccccceeeeeccHHHHHHHHHHHHHHHHhhhcccCCccccccccccc
Q 037655 762 PLTRYEETVLPMLKKKLLEFTVLDKSVSEKLNELTIPKLCIRLNTLQYIQKQVSVLEEGIRKSWALVGPAVDQASAEGET 841 (1125)
Q Consensus 762 ~LTR~~~e~~~f~Kkkv~~~~~P~~~~~~~~~~~~~~~LCVrLNNLeyi~~qLd~LEk~I~~~w~~~~~~~~l~~a~~~t 841 (1125)
+.+.... .+.. ......+-+|..+||-......++.++..+...+...
T Consensus 299 -----------~~~~~~~---~~~~-----~~~~~~eyliA~~N~~~~~~~~~~~l~~~~~~~~~~~------------- 346 (566)
T PF06046_consen 299 -----------FKDRSSV---KPKE-----NPPGYLEYLIAVANNCLRCRDYVESLEQKFEEKVSQK------------- 346 (566)
T ss_dssp -----------HHHHHHH---HHCC-------S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-HH-------------
T ss_pred -----------HHhhhcc---cccc-----cccchHHHHHHHhccHHHHHHHHHHHHHhcccccchH-------------
Confidence 0000000 0000 0113367799999999999999999888764432100
Q ss_pred hhhhhhhcccCchhhhhHHHhHHHHHHHHHHHHHHHHHhhhhceeeeeccchhhhhhccccc-chhhhHHHhHHHHHHHH
Q 037655 842 EESLERNFLTSSEAVDELFITTLNIIRDTATGAIRKICDFIGARVVFWDLRDSFLCCLYRGS-VESARLESFLTHIDTVL 920 (1125)
Q Consensus 842 ~~s~~~~l~~~~~~~~~~~~~~F~~ar~a~~~aI~~l~e~ia~rlVF~Dlr~~~~d~LYvg~-Vs~~RIeplL~~Ld~~L 920 (1125)
.... ....+....++.-.-++.+++.|++ .||.|+...| ..|+... ..++.++.++..++..+
T Consensus 347 ---~~~~-------~~~~~~~~~~~~~~l~~~~~~~L~~-----~if~Dl~p~~-~~Lft~~W~~~~~~~~I~~Ti~dY~ 410 (566)
T PF06046_consen 347 ---YMER-------ISSDLEELMDGFDDLAKECCQYLLE-----EIFNDLKPHF-KKLFTKKWYSGEAVDTICATIEDYL 410 (566)
T ss_dssp ---HHHH-------HHHHHCTTHHHHHHHHHHHHHHHHH-----HHHHCTHHHH-CTTTSGGGCTS-HHHHHHHHHHHHH
T ss_pred ---HHhh-------hhhhHHHHHHHHHHHHHHHHHHHHH-----HHHHHhHHHH-HHhCcCcCcCcchHHHHHHHHHHHH
Confidence 0000 0112223333333445556666666 4778988654 3333322 22377899999999999
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCC---CCCChhHHHHHHHHHHHHHHhhhcCCCCCcHHHHHHHHHH
Q 037655 921 DHICSLIDDSLRDFVVLSICRASLEGYVWVLLDGGPS---RAFSNSDITMMEDDLNTLKEFFIAGGEGLPRSLVEREAKY 997 (1125)
Q Consensus 921 ~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VLL~GGps---R~Fs~~D~~~lEeDL~~Lk~fF~A~GEGLp~elVe~~~~~ 997 (1125)
.-+...+.+..+..++.++...++-.++..|+.+... +.-..+-.+.|..|.+.|++||-.-| ..+.+......
T Consensus 411 ~d~~~~l~~~~~~~l~~~~~~~~v~~Yl~~l~~kk~~~~~~~~~~~~a~~i~~D~~~l~~~F~~~~---~~~~~~~~~~~ 487 (566)
T PF06046_consen 411 QDFQHYLRPPYFQELIEELHDRVVKEYLRALMKKKIKFKNKEERKEAAERIRRDAEQLKSFFSKLG---SKSEVKSSFDV 487 (566)
T ss_dssp HHHCCCS-HHHHHHHHHHHHHHHHHHHHHGGGG---------CCCCCHHHHHHHHHHHHHHHHHHT---HHHHHHHHHHH
T ss_pred HHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHhc---ccccccchHHH
Confidence 9999999999999999999999999999999997742 33356778999999999999999988 78888888999
Q ss_pred HHHHHhhh-cccHHHHHHHHHHhhhhhhcCCCCCCCCCCCCCCccceeeecccCCC
Q 037655 998 AEEILGLF-TLQSETLIRMLMSASENISLDLDPQNHGPMHVEDANTLVRVLCHKKD 1052 (1125)
Q Consensus 998 v~~vL~L~-~~~Te~LIe~f~~a~~~~~~g~~ppt~g~w~~~d~nTILRVLChR~D 1052 (1125)
+..++.+. ..+++.+...+...... - | --..+.|..||.-|.|
T Consensus 488 l~~l~~ll~~~d~~~i~l~~~~l~~~---y--p-------D~~~~~v~alL~~R~D 531 (566)
T PF06046_consen 488 LEDLLELLRLEDPEMIKLEVSSLLQK---Y--P-------DISEEHVEALLALRGD 531 (566)
T ss_dssp HHHHHHHH-HS-CCCHHHHHHHHHCC------T-------T--SHHHHHHHCT-TT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHh---C--C-------CCCHHHHHHHHHhccC
Confidence 99999999 56666665555444321 1 1 1455678899999975
No 6
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases. RINT1 also functions in membrane trafficking from the endoplasmic reticulum(ER) to the Golgi complex in interphase cells [, , ]. In addition to this, the TIP-1 protein, which is involved in the retrograde transport from the Golgi to the ER []. They share a similar domain organisation with an N-terminal leucine heptad repeat rich coiled coil and an ~500-residue C-terminal RINT1/TIP20 domain, which might be a protein-protein interaction module necessary for the formation of functional complexes.; PDB: 3FHN_A.
Probab=96.75 E-value=0.18 Score=61.27 Aligned_cols=301 Identities=17% Similarity=0.135 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc-cCCcccCCC-------CccCcccHHHHHHHHHHHHHHHHcCCCC-ccHHHHHHHH
Q 037655 662 RPIILDWLIAQHAHILEWTGRAFD-LEDWEPLSF-------QQRQGASIIEVFRIIEETVDQFFGMNLP-LDIIHLQALL 732 (1125)
Q Consensus 662 ~~~V~~Wi~~~~~ki~ewV~rAiq-~E~W~P~s~-------~e~hSsSVVDIFrm~~Etvd~ffqL~wp-~~a~lL~aLs 732 (1125)
......|++--.+-..+-++..+. .+.|++..+ +-+-..|++.+.++++.+.+.+-.|+-. ....|+..+-
T Consensus 131 ~~~~~~Wl~~E~~~a~~r~~~i~~s~~aw~~~~~~~~~~~~~~k~t~~A~~~~~Ll~~it~ry~~L~~~~~rl~Fl~~iq 210 (494)
T PF04437_consen 131 PDWFDRWLNAEKEFALERFDEIISSPDAWQIDYDDVEADSDELKPTKSAERFVKLLESITDRYRPLPSLSHRLRFLIDIQ 210 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---------------HTTSSGGGG-GGHHHHHHHHHHHHHHHHHHHHH---GG--GHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcccchhhhhhhccccCCchhhcchHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 467789999888888888887776 457888742 2355679999999999999998888644 5566775555
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccCCCCCCCchhhhhhhhHHHhhcccccccccccccccccccccceeeeeccHHHHHH
Q 037655 733 SIIFHSLDAYLQRLLNQLVEQKHLYPSAPPLTRYEETVLPMLKKKLLEFTVLDKSVSEKLNELTIPKLCIRLNTLQYIQK 812 (1125)
Q Consensus 733 ~Gid~~lq~Y~~~v~~~cgske~liP~~P~LTR~~~e~~~f~Kkkv~~~~~P~~~~~~~~~~~~~~~LCVrLNNLeyi~~ 812 (1125)
-. .+..|-..+.+.|.+-+.+.-. .+. . ....+..++|..+|+.+|+..
T Consensus 211 l~---lld~~~~~L~~~~~~~~~~~s~---------------~~~-----~--------~~~~~l~~l~~~lnsa~yi~~ 259 (494)
T PF04437_consen 211 LP---LLDDYHDRLSQSLEAFESSTST---------------LAS-----L--------SGDSGLERLCKILNSANYIEN 259 (494)
T ss_dssp HH---HHHHTHHHHHHHHHHHHHT-------------------SC-----E--------EHHHHHHHHHHHHHHHHHHHH
T ss_pred HH---HHHHHHHHHHHHHHHHhhcccc---------------hhh-----c--------cCCchHHHHHHHHHHHHHHHH
Confidence 43 3555555555554221111100 000 0 012336899999999999999
Q ss_pred HHHHHHHHHHhhhcccCCccccccccccchhhhhhhcccCchhhhhHHHhHHHHHHHHHHHHHHHHHhhhhceeeeeccc
Q 037655 813 QVSVLEEGIRKSWALVGPAVDQASAEGETEESLERNFLTSSEAVDELFITTLNIIRDTATGAIRKICDFIGARVVFWDLR 892 (1125)
Q Consensus 813 qLd~LEk~I~~~w~~~~~~~~l~~a~~~t~~s~~~~l~~~~~~~~~~~~~~F~~ar~a~~~aI~~l~e~ia~rlVF~Dlr 892 (1125)
.|....+.+-.= ..+... .... .+++.. ..... ...-.+.|+.+......-.+.+.+.+...++ .+++
T Consensus 260 ~L~eW~e~~~Fl--q~~~~~----~~~~-~~~~~~-~~~~~---~~~~~siFde~i~~y~~l~~~~~~~iv~~v~-~~~k 327 (494)
T PF04437_consen 260 VLREWSEDVFFL--QMRAKE----SESS-NNSLED-IANET---SSEEGSIFDETISAYEKLRKRMLESIVDRVV-KEFK 327 (494)
T ss_dssp HHHHHCTSHHHH-------------------HHHH-HHHHH---TT--S-TTHHHHHHHHHHHTHHHHHHHHHHH-HHHH
T ss_pred HHHHhcCCCeee--hhhccc----hhhc-cccccc-ccccc---cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 998876644221 000000 0000 000000 00000 0011235555555555444444443333322 2222
Q ss_pred h--------hhhhhcccc-----cchhhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 037655 893 D--------SFLCCLYRG-----SVESARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYVWVLLDGGPSRA 959 (1125)
Q Consensus 893 ~--------~~~d~LYvg-----~Vs~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VLL~GGpsR~ 959 (1125)
. .-|...... ...++.+-|.+..|...|..|...|......++-+.|...+-+-+.--++- ...
T Consensus 328 ~~lk~Y~k~~~W~~~~~~~~~~~~~~S~el~~~L~~L~~~L~~L~~~L~~~~f~~i~r~ia~~l~~~l~~~Il~---~n~ 404 (494)
T PF04437_consen 328 ASLKAYFKRSQWSSIESPSDSSPLSPSPELVPALSLLRSRLSFLERSLPPADFRRIWRRIASKLDDYLWESILM---SNK 404 (494)
T ss_dssp HHTHHHHT--GGGT-------------GGGHHHHHHHHHHHHHHHTS--HHHHHHHHHHHHHHHHHHHHHTTTT---TS-
T ss_pred HHHHHHhCccCCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhhh---cCe
Confidence 2 123333333 122567889999999999999998877766666655555554444443333 238
Q ss_pred CChhHHHHHHHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHHhhhcccHHHHH
Q 037655 960 FSNSDITMMEDDLNTLKEFFIAGGEGLPRSLVEREAKYAEEILGLFTLQSETLI 1013 (1125)
Q Consensus 960 Fs~~D~~~lEeDL~~Lk~fF~A~GEGLp~elVe~~~~~v~~vL~L~~~~Te~LI 1013 (1125)
||..-..-++.|++.|...|-. ..+.| ++....+.+.+.|..++.+...
T Consensus 405 Fs~~Ga~Ql~~D~~~L~~~~~~-~~~~p----~~~f~~l~E~~~LL~L~~~~~~ 453 (494)
T PF04437_consen 405 FSRAGAAQLQFDMRALFSVFSQ-YTPRP----EAFFKRLREACKLLNLPYGSAK 453 (494)
T ss_dssp B-HHHHHHHHHHHHHHHTTS---TTSGG-----HHHHHHHHHHHHHGGGG-CGG
T ss_pred eChhHHHHHHHHHHHHHHHHHh-hccCH----HHHHHHHHHHHHHcCCCCcchh
Confidence 9999999999999999999988 33333 5778888888888888877533
No 7
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane. The exocyst complex is composed of Sec3, Sec5, Sec6, Sec8, Sec10, Sec15, Exo70 and Exo84.; GO: 0006904 vesicle docking involved in exocytosis, 0000145 exocyst; PDB: 2A2F_X.
Probab=96.74 E-value=0.0099 Score=68.08 Aligned_cols=253 Identities=16% Similarity=0.184 Sum_probs=144.5
Q ss_pred CccCcccHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCchhhhhhhhHH
Q 037655 695 QQRQGASIIEVFRIIEETVDQFFGMNLPLDIIHLQALLSIIFHSLDAYLQRLLNQLVEQKHLYPSAPPLTRYEETVLPML 774 (1125)
Q Consensus 695 ~e~hSsSVVDIFrm~~Etvd~ffqL~wp~~a~lL~aLs~Gid~~lq~Y~~~v~~~cgske~liP~~P~LTR~~~e~~~f~ 774 (1125)
.=+||+.+..+.+.++..++.++..-...+ . -..-++..+.+|.+.+..... + .-+
T Consensus 27 ~lPFS~~vp~~c~~ir~fi~~~~~F~~~~~----~-~~~eid~~v~ks~d~lL~~~l--------------~-----~~L 82 (311)
T PF04091_consen 27 KLPFSQMVPMCCRQIRSFIEKCYKFSDDLY----Q-SSTEIDDIVRKSLDRLLTRVL--------------N-----GSL 82 (311)
T ss_dssp -SSSBTHHHHHHHHHHHHHHHHHHHHHHTT-------HHHHHHHHHHHHHHHHHHHH--------------H-----HHH
T ss_pred eCCCchHHHHHHHHHHHHHHHHHHHHHhcc----c-chHHHHHHHHHHHHHHHHHHH--------------H-----HHH
Confidence 357999999999999999999987432111 1 112344556666666533210 0 013
Q ss_pred HhhcccccccccccccccccccccceeeeeccHHHHHHHHHHHHHHHHhhhcccCCccccccccccchhhhhhhcccCch
Q 037655 775 KKKLLEFTVLDKSVSEKLNELTIPKLCIRLNTLQYIQKQVSVLEEGIRKSWALVGPAVDQASAEGETEESLERNFLTSSE 854 (1125)
Q Consensus 775 Kkkv~~~~~P~~~~~~~~~~~~~~~LCVrLNNLeyi~~qLd~LEk~I~~~w~~~~~~~~l~~a~~~t~~s~~~~l~~~~~ 854 (1125)
++++.. . .+..+++=.+.|++|.......||+-|...-....... + +
T Consensus 83 ~~~i~~------------~-~~l~qi~Qi~iNl~~le~Ac~~le~~l~~~~~~~~~~~------~-------------~- 129 (311)
T PF04091_consen 83 KSKIRS------------S-LNLSQIVQIVINLEYLEKACKELEEFLSSLRGIPQSAG------G-------------H- 129 (311)
T ss_dssp HHHHT-------------T-S-HHHHHHHHHHHHHHHTTHHHHHHHHHHHHT----------------------------
T ss_pred HHHHhc------------C-CCHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCCCccch------H-------------h-
Confidence 334322 2 34567777889999999999999998865421111000 0 0
Q ss_pred hhhhHHHhHHHHHHHHHHHHHHHHHhhhhceee-eeccchhhhhhcccccchhhhHHHhHHHHHHHHHHHHhhhhhhhHH
Q 037655 855 AVDELFITTLNIIRDTATGAIRKICDFIGARVV-FWDLRDSFLCCLYRGSVESARLESFLTHIDTVLDHICSLIDDSLRD 933 (1125)
Q Consensus 855 ~~~~~~~~~F~~ar~a~~~aI~~l~e~ia~rlV-F~Dlr~~~~d~LYvg~Vs~~RIeplL~~Ld~~L~~l~s~l~d~~r~ 933 (1125)
..-.....|..+|..+...|-.+.+ .|+- |.++-..=|..-=..+-++.-|..++.||+..+..+-.+|...++.
T Consensus 130 -~~l~a~~~f~~~r~~Ae~~I~~lv~---~KIDe~lela~yDW~~~~~~~~ps~yi~dli~fL~~~f~s~l~~LP~~v~~ 205 (311)
T PF04091_consen 130 -IRLKATKMFKDARKAAEKRIFELVN---SKIDEFLELAEYDWTPTEPPGEPSDYINDLIQFLETTFSSTLTNLPPSVKQ 205 (311)
T ss_dssp ---------S---TTHHHHHHHHHHH---HHHHHHHTT--TT--------S--HHHHHHHHHHHHHHHTTTTTSH-HHHH
T ss_pred -HhhhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhcccceecCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 0112357788888777776654444 3431 3344431122212222346679999999999999888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHhhhcC-CCCCcHHHHHHHHHHHHHHHhhhcccH
Q 037655 934 FVVLSICRASLEGYVWVLLDGGPSRAFSNSDITMMEDDLNTLKEFFIAG-GEGLPRSLVEREAKYAEEILGLFTLQS 1009 (1125)
Q Consensus 934 rvv~~vmkAs~e~fL~VLL~GGpsR~Fs~~D~~~lEeDL~~Lk~fF~A~-GEGLp~elVe~~~~~v~~vL~L~~~~T 1009 (1125)
.+..+.|+.+=+.|+-.|++..+ +.++..-+.-+.-|++.|..|--.. ..|.....+......+++.+.|+..+.
T Consensus 206 ~~~~~a~~his~~l~~~Ll~~~v-k~in~~al~~~~~Dv~~lE~f~~~~~~~~~~~~~L~~~F~eLrQlvdLl~s~~ 281 (311)
T PF04091_consen 206 LVYFSACDHISESLLDLLLSDDV-KRINMNALQNFDLDVKYLESFADSLPVPGNNIPSLRETFAELRQLVDLLLSDD 281 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHT----------TTHHHHHHHHHHHHHHHTT-SSSS--SSTTGGGGHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHhcCCcc-cccCHHHHHHHHHHHHHHHHHHHhCcCcccccccHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999986554 5579999999999999999999887 222223334445566788888775543
No 8
>COG5173 SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion]
Probab=96.35 E-value=2.8 Score=51.07 Aligned_cols=444 Identities=16% Similarity=0.172 Sum_probs=238.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccc-cc-cCchHHHHHHHHHHHHHHHHhhhccchhhhhccchhhHhHHHHHHHHH
Q 037655 547 AARKVKGYVEKSIETACRQVASTIDLES-KV-QRSHPLALLANELRSIAERELTVFWPAICHWCSEALTISAIMLHHFYR 624 (1125)
Q Consensus 547 ~~~~vd~yIrsS~~~af~~~le~~~~~~-~~-e~~~vL~~Lak~i~~La~ke~~~fSPiL~rwhP~a~~Vaa~~Lh~~yg 624 (1125)
..+-+-..|..|+++.|+++-++..... .+ +...+ =+++.-.-+.+...|-| .|| | +.+.|.-|.
T Consensus 253 lk~f~i~~i~~sv~e~F~r~r~~yi~d~sgelnmDfI----f~dL~~i~e~i~~~~pp---~~N--I----~~~y~~~Yq 319 (742)
T COG5173 253 LKDFVIKSIEVSVKEKFDRLRNEYIFDNSGELNMDFI----FKDLSFIRENISLSFPP---FDN--I----LTLYHNNYQ 319 (742)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHhcCcchhhhHHH----HHHHHHHHHHccccCCc---hHH--H----HHHHHHHHH
Confidence 4445566777889999999877754322 22 22222 23333222333333422 144 3 234556665
Q ss_pred hhhHHHHhhhhhccHHHHHHhhhhh-------cCC--CCcccccc--------cHHHHHHHHHHHHHHHHHHHHhhhcc-
Q 037655 625 EILKPFLQGVTSLSEDARLVLSAAN-------KMF--LFGQIGEV--------CRPIILDWLIAQHAHILEWTGRAFDL- 686 (1125)
Q Consensus 625 ~~Lk~fl~~v~~lt~d~~~VL~aAd-------~LE--~Pf~iE~~--------~~~~V~~Wi~~~~~ki~ewV~rAiq~- 686 (1125)
..|-..+-+.-+.-+++..+|.--. -|| |||-++++ -+.+++...+-...|++||+.+..+.
T Consensus 320 ecL~~L~td~v~~~~~a~~iL~ii~f~~~y~~t~e~~f~f~~dev~~~l~d~e~g~L~~~Yt~l~~~Kl~EWv~nl~~~e 399 (742)
T COG5173 320 ECLLKLFTDEVTERLDAGEILAIIEFVGNYYNTIESKFNFIADEVGGRLLDNETGELLEKYTKLAQEKLKEWVMNLTRIE 399 (742)
T ss_pred HHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHhCCccHHHhcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554444444344455555554332 222 77744332 35789999999999999999998774
Q ss_pred -CCcccCCC-------CccCcccHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCC
Q 037655 687 -EDWEPLSF-------QQRQGASIIEVFRIIEETVDQFFGMNLPLDIIHLQALLSIIFHSLDAYLQRLLNQLVEQKHLYP 758 (1125)
Q Consensus 687 -E~W~P~s~-------~e~hSsSVVDIFrm~~Etvd~ffqL~wp~~a~lL~aLs~Gid~~lq~Y~~~v~~~cgske~liP 758 (1125)
|+|--++. .--..+--+-.|.||.|-++..-.=+ .++++--....|...++.|+..-.+... ++|
T Consensus 400 vd~F~~R~~ep~~Dsdg~l~l~Gt~~~fQmitqQ~e~ia~tn---~sdvvgiV~~~i~~~~tk~q~~wks~l~--ee~-- 472 (742)
T COG5173 400 VDKFYARNEEPSRDSDGKLVLPGTVSLFQMITQQLEPIAFTN---RSDVVGIVFAHITRTITKYQEIWKSNLV--EEM-- 472 (742)
T ss_pred HHHHHHcCCCCCcCCCcCccCccHHHHHHHHHHHhhhhhcCC---ccchhhhhHHHHHHHHHHHHHHHHHHHH--HHH--
Confidence 46765552 12345567889999999887665433 4444555555555557777766443321 111
Q ss_pred CCCCCchhhhhhhhHHHhhcccccccccccccccccccccceeeeecc-----HHHHHHHHHHHHHHHHhhhcccCCccc
Q 037655 759 SAPPLTRYEETVLPMLKKKLLEFTVLDKSVSEKLNELTIPKLCIRLNT-----LQYIQKQVSVLEEGIRKSWALVGPAVD 833 (1125)
Q Consensus 759 ~~P~LTR~~~e~~~f~Kkkv~~~~~P~~~~~~~~~~~~~~~LCVrLNN-----Leyi~~qLd~LEk~I~~~w~~~~~~~~ 833 (1125)
+|.+.. .|+.-+ | .|...-|+..-| -+||-.-..+--+-|..-
T Consensus 473 ----------------~kq~~~--npEs~~--p---~Gl~eyliav~Nd~lK~A~y~~~~~sntfeLitse--------- 520 (742)
T COG5173 473 ----------------DKQFKS--NPESSS--P---AGLEEYLIAVGNDGLKIAQYITSLPSNTFELITSE--------- 520 (742)
T ss_pred ----------------HHHhcC--CCccCC--c---chHHHHHHHHcCCcchHHHHHHhcchhhhhhhhHH---------
Confidence 111111 111100 0 011111221111 011111111000000000
Q ss_pred cccccccchhhhhhhcccCchhhhhHHHhHHHHHHHHHHHHHHHHHhhhhceeeeeccch----hhhhhcccccchhhhH
Q 037655 834 QASAEGETEESLERNFLTSSEAVDELFITTLNIIRDTATGAIRKICDFIGARVVFWDLRD----SFLCCLYRGSVESARL 909 (1125)
Q Consensus 834 l~~a~~~t~~s~~~~l~~~~~~~~~~~~~~F~~ar~a~~~aI~~l~e~ia~rlVF~Dlr~----~~~d~LYvg~Vs~~RI 909 (1125)
+.+. ....+..+.++--.-++.+.-.|.++ +|.|++. .|-++-|.|++..--+
T Consensus 521 -----------ye~d-------~~~~lgkTvDgfi~I~~~s~~~l~~~-----i~~d~~pa~~~iF~~~Wy~gS~~k~Iv 577 (742)
T COG5173 521 -----------YEND-------EVKELGKTVDGFIDILKASNTFLAEF-----IIYDCQPAIDKIFTDEWYGGSVTKVIV 577 (742)
T ss_pred -----------HHHH-------HHHHhcccchhHHHHHhhhhHHHHHH-----HHHhhhhhHHHhcCccccccchHHHHH
Confidence 0000 00011111112222233334455553 4457765 4466789999887777
Q ss_pred HHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhHH--HHHHHHHHHHHHhhhcCCCCCc
Q 037655 910 ESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYVWVLLDGGPSRAFSNSDI--TMMEDDLNTLKEFFIAGGEGLP 987 (1125)
Q Consensus 910 eplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VLL~GGpsR~Fs~~D~--~~lEeDL~~Lk~fF~A~GEGLp 987 (1125)
.-+=+||-.+-.+|++.+ +...+-++--++.=+||+.| |--|+|-.++. +-|..|+..+-+.|..-|+|
T Consensus 578 dTl~dyl~D~~~~M~~~l----Fv~Fi~e~s~~~vi~yl~~l---~~k~a~~~~~na~~~lksD~~~~y~~f~~y~d~-- 648 (742)
T COG5173 578 DTLQDYLSDYQNTMSEYL----FVTFIHELSMSIVIAYLKQL---GRKRASIAEENASRTLKSDHTKLYEMFSGYGDP-- 648 (742)
T ss_pred HHHHHHHHHHHHhcccHH----HHHHHHHHHHHHHHHHHHHH---hhhhhhhcchhHHHHHHHHHHHHHHHHHhhCCH--
Confidence 777777777777777766 45566666666666676665 55567766665 77889999999999877763
Q ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhhhhhhcCCCCCCCCCCCCCCccceeeecccCCCchhhHHHHHHcC-CC
Q 037655 988 RSLVEREAKYAEEILGLFTLQSETLIRMLMSASENISLDLDPQNHGPMHVEDANTLVRVLCHKKDRESSKFLKQQYH-LP 1066 (1125)
Q Consensus 988 ~elVe~~~~~v~~vL~L~~~~Te~LIe~f~~a~~~~~~g~~ppt~g~w~~~d~nTILRVLChR~D~~AskFLKk~f~-Lp 1066 (1125)
+-+.....++..++++|.+....++-.+.+.--+.. |+ .-...|--||-.|+|-+-| .+||.-. +-
T Consensus 649 -e~~k~tl~pI~k~~~~m~~~~~d~~~~~~~~lkeiY----------wD-~~~sli~~Ilk~R~Dl~~s-Iiqk~t~~~r 715 (742)
T COG5173 649 -EDVKTTLSPILKIIPLMDTRNDDLFIVEVKSLKEIY----------WD-IKKSLIKTILKKRQDLTES-IIQKKTLADR 715 (742)
T ss_pred -HHHHHHHHHHHHHHcccccCCchHHHHHHHHHHHHh----------cc-chHHHHHHHHHhhhhhHHH-HHHHHHHHHH
Confidence 444555677999999998877666555544332211 11 2244577789999998877 5555332 22
Q ss_pred CCCCCCCCCCCCccCCCch-hHhhhh
Q 037655 1067 ISSEYDDTPSSNSTLRSPL-AFDLLK 1091 (1125)
Q Consensus 1067 k~~~~~~~~~~~~~~~~~~-~~~~~~ 1091 (1125)
-...+-|+ + +++-|+ ||-++.
T Consensus 716 ~~~~~~~v---~-tsrepTifsr~~~ 737 (742)
T COG5173 716 LKECFTDV---A-TSREPTIFSRLLN 737 (742)
T ss_pred HHhhcccc---c-cccCchHHHHHHH
Confidence 12222233 2 677888 565554
No 9
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.18 E-value=4.6 Score=50.70 Aligned_cols=148 Identities=19% Similarity=0.247 Sum_probs=103.3
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHhhhccCCcc--cCCCCccCc---ccHHHHHHHHHHHHHHHHcCCCCccHHHHHH
Q 037655 656 QIGEVCRPIILDWLIAQHAHILEWTGRAFDLEDWE--PLSFQQRQG---ASIIEVFRIIEETVDQFFGMNLPLDIIHLQA 730 (1125)
Q Consensus 656 ~iE~~~~~~V~~Wi~~~~~ki~ewV~rAiq~E~W~--P~s~~e~hS---sSVVDIFrm~~Etvd~ffqL~wp~~a~lL~a 730 (1125)
.|-+.|.|++.-||+.+...+.+-+++-++.++|. |.++.+-+| +|-.|+|+.-+-++-+..+|-=.. +=|-+
T Consensus 365 ~isScFEPhLtlyI~~qek~l~ellek~v~e~~~~~~p~~~~~~~s~vlpSsadlF~~Ykkcltq~~~Ls~n~--dpl~~ 442 (793)
T KOG2180|consen 365 AISSCFEPHLTLYIESQEKELSELLEKFVSEEKWDGEPKSNTDEESLVLPSSADLFVAYKKCLTQCSELSENN--DPLIA 442 (793)
T ss_pred HHHHhcccchhhhhhHHHHHHHHHHHHHHhhhccCCCCCCCcccccccCccHHHHHHHHHHHHHHHHHhccCC--chHHH
Confidence 47789999999999999999999999999999996 766444444 488999999999999999995331 12233
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCchhhhhhhhH--HH-hhccccc-ccccccccccccccccceeeeecc
Q 037655 731 LLSIIFHSLDAYLQRLLNQLVEQKHLYPSAPPLTRYEETVLPM--LK-KKLLEFT-VLDKSVSEKLNELTIPKLCIRLNT 806 (1125)
Q Consensus 731 Ls~Gid~~lq~Y~~~v~~~cgske~liP~~P~LTR~~~e~~~f--~K-kkv~~~~-~P~~~~~~~~~~~~~~~LCVrLNN 806 (1125)
+..-+.+.++.|+.++...+ +|..|-..-+..-+ .+ ....-|. ++ ...-..|.+||+
T Consensus 443 ~~~~f~k~LreYa~kil~~~---------lP~~t~~s~g~~v~~l~~~e~~~~~~~t~----------d~l~di~~~lst 503 (793)
T KOG2180|consen 443 LLAVFSKWLREYAQKILLGN---------LPDTTSSSDGAAVYLLLRIEGAEYCRFTI----------DQLLDICCILST 503 (793)
T ss_pred HHHHHHHHHHHHHHHHhhcc---------CCcccccccCchhhhHHHhhhhhhhcccH----------HHHHHHHHHHHH
Confidence 33467789999999875432 55444322111111 22 1111111 11 113457999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 037655 807 LQYIQKQVSVLEEGIRKS 824 (1125)
Q Consensus 807 Leyi~~qLd~LEk~I~~~ 824 (1125)
.+|+..---.||+++.+.
T Consensus 504 ~e~~~~tt~qle~kl~e~ 521 (793)
T KOG2180|consen 504 AEYCLATTIQLEKKLKEI 521 (793)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999987654
No 10
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=95.93 E-value=0.94 Score=55.27 Aligned_cols=316 Identities=12% Similarity=0.146 Sum_probs=182.9
Q ss_pred HHHHHHHHhh--hcccCc----ccchHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHhhcccC---chhhHHHHHHH
Q 037655 378 RLYEKLLFGM--FDVLDE----CQLIEEADAIMSLIKLTWPTLGITQKMHYGIFAWVLFQQFVGTG---EGMLLEYAVLE 448 (1125)
Q Consensus 378 rlY~~LL~~~--FD~~de----~~l~eE~dElLelik~tW~iLgit~~~Hnvcf~wVlF~qyV~tg---e~dlL~aA~~~ 448 (1125)
++|..+-... |-++|. |-++----=+|++-|-+.-+-|.- |++||+--|..+- +.| +|-||-.+|++
T Consensus 610 ~lf~~vqrltldhrlndsysclgwfspgqvfvldeycarygvrgch---rhlcyl~~lle~a-enga~idptllhysfaf 685 (1218)
T KOG3543|consen 610 HLFSDVQRLTLDHRLNDSYSCLGWFSPGQVFVLDEYCARYGVRGCH---RHLCYLSNLLEKA-ENGALIDPTLLHYSFAF 685 (1218)
T ss_pred HHHHHHHHHhhhhhcCCcchhccccCCCceeeeHHHHHHhhhhhHH---HHHHHHHHHHHhc-cCCcccChHHHHHHHHH
Confidence 5577776666 555555 211111114678889999999998 9999999888875 455 89999999999
Q ss_pred hhccCCCcccCcccccchhhhhhhcccCCccccHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCcc--hhhHHHHHHHHhh
Q 037655 449 LQKVSPTEEDDGKEVQYINNIICSRKLNDRKDNLSLLQAIFVSISIWCDSKLQDYHRHFSQEPSN--FKRVMALASTVGV 526 (1125)
Q Consensus 449 l~ev~~d~~~~~~~~~y~~~l~~~~~~~~t~~d~~ll~s~LssI~~w~~krL~dyH~~f~~~~~~--me~i~~v~~~~~~ 526 (1125)
-..-.-. +..+..-.- |..+-.-.+.+-.-+.--++++.-++---|+-|.|. .+..++ ++++
T Consensus 686 cashvhg---nrpdgigtv----------tveekerfeeikerlrvllenqithfrycfpfgrpegalkatls---ller 749 (1218)
T KOG3543|consen 686 CASHVHG---NRPDGIGTV----------TVEEKERFEEIKERLRVLLENQITHFRYCFPFGRPEGALKATLS---LLER 749 (1218)
T ss_pred HHHhccC---CCCCCccee----------eehhHHHHHHHHHHHHHHHHhhhhceEeeccCCCcchHHHHHHH---HHHH
Confidence 6532221 111211111 112222333333444444677776665558777762 443333 4556
Q ss_pred hcCCCchhhhhhccCccchHHHHHHHHHHHHHHHHHHHHHhhccc-------ccccccCchHHHHHHHHHHHHHHHHhhh
Q 037655 527 FTPGDCAEIKLTKLHTSNDNAARKVKGYVEKSIETACRQVASTID-------LESKVQRSHPLALLANELRSIAERELTV 599 (1125)
Q Consensus 527 il~eD~~~~~~~~~~~~~~~~~~~vd~yIrsS~~~af~~~le~~~-------~~~~~e~~~vL~~Lak~i~~La~ke~~~ 599 (1125)
++-.|... + -..+....-|..++...+---|+++-+-.. ..+-+.-.+-++.||.-+.++.+..-+.
T Consensus 750 vlmkdivt-----p-vp~eevk~virkcle~aalvnytrl~eyakiee~m~~a~~~a~kled~irlaelcievlqqneeh 823 (1218)
T KOG3543|consen 750 VLMKDIVT-----P-VPPEEVKAVIRKCLEDAALVNYTRLCEYAKIEERMGIAVSPAQKLEDMIRLAELCIEVLQQNEEH 823 (1218)
T ss_pred HHHHhcCC-----C-CCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 66555431 1 012334444444544444444666543321 1110100111244444443333322222
Q ss_pred ccchhhhhccchhhHhHHHHHHHHHhhhHHHHhhhhhccHHHHHHhhhhhcC-------C---CCcccccccHHHHHHHH
Q 037655 600 FWPAICHWCSEALTISAIMLHHFYREILKPFLQGVTSLSEDARLVLSAANKM-------F---LFGQIGEVCRPIILDWL 669 (1125)
Q Consensus 600 fSPiL~rwhP~a~~Vaa~~Lh~~yg~~Lk~fl~~v~~lt~d~~~VL~aAd~L-------E---~Pf~iE~~~~~~V~~Wi 669 (1125)
..-.| .|-|.....-|-.+-.+|..++-.-++---+=|=|..-.++.-+.| - |.-++-..|.|+|-+++
T Consensus 824 hgeaf-awwsdll~ehae~fwslfsvdmdsalevqp~dswdsfplfqllndflr~d~~lcngkfhkhlq~~f~plvvryv 902 (1218)
T KOG3543|consen 824 HGEAF-AWWSDLLSEHAEIFWSLFSVDMDSALEVQPHDSWDSFPLFQLLNDFLRSDSSLCNGKFHKHLQQQFQPLVVRYV 902 (1218)
T ss_pred cchHH-HhHHHHHHHHHHHHHHHHhcccchhcccCCCCccccchHHHHHHHHHhhhhhcccchhHHHHHHHhhhHHHHHH
Confidence 22222 4666666777777778888877654432211111222222222221 1 66678899999999999
Q ss_pred HHHHHHHHHHHHhhhccCCcccCCCCccCcccHHHHHHHHHHHHHHHHcCCCCc
Q 037655 670 IAQHAHILEWTGRAFDLEDWEPLSFQQRQGASIIEVFRIIEETVDQFFGMNLPL 723 (1125)
Q Consensus 670 ~~~~~ki~ewV~rAiq~E~W~P~s~~e~hSsSVVDIFrm~~Etvd~ffqL~wp~ 723 (1125)
+--..-|..-++|-+++|+|+|+.+. |...-|+|=-++..--..+.|.||.
T Consensus 903 dlmessiaqsihrgfe~e~wepvkng---satsedlfwkldalqtfv~dlhwpe 953 (1218)
T KOG3543|consen 903 DLMESSIAQSIHRGFEKEKWEPVKNG---SATSEDLFWKLDALQTFVIDLHWPE 953 (1218)
T ss_pred HHHHHHHHHHHhccchhhccccccCC---CcchHhHHHHHHHHHHHHhhcCCCH
Confidence 99999999999999999999999853 3445689988888888889999994
No 11
>KOG2286 consensus Exocyst complex subunit SEC6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.90 E-value=2.4 Score=53.46 Aligned_cols=359 Identities=16% Similarity=0.178 Sum_probs=206.4
Q ss_pred HHHHHHHHHHhhhccchhhhhccchhhHhHHHHHHHHHhhhHHHHhhhhhccHHHHHHhhhh---h-cCC------CCcc
Q 037655 587 NELRSIAERELTVFWPAICHWCSEALTISAIMLHHFYREILKPFLQGVTSLSEDARLVLSAA---N-KMF------LFGQ 656 (1125)
Q Consensus 587 k~i~~La~ke~~~fSPiL~rwhP~a~~Vaa~~Lh~~yg~~Lk~fl~~v~~lt~d~~~VL~aA---d-~LE------~Pf~ 656 (1125)
.++..........|+| +|+ +....+ ..|...|..++.++.+.-++..++++-- . .++ +++.
T Consensus 248 EdL~~~~~~l~~cfpp---~~~--if~~~l----~~Yh~~ls~ll~dl~s~~l~~~eil~llawV~~~~~~~~l~~~~~~ 318 (667)
T KOG2286|consen 248 EDLRVAKRVLVPCFPP---HYN--IFSAYL----ELYHQALSDLLRDLASEALELREILQLLAWVRNEYYTPLLQLNVDV 318 (667)
T ss_pred HHHHHHHHhhcccCCc---hhH--HHHHHH----HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHhcChhhhccchh
Confidence 3344333344455655 344 433333 5677777777777766555444333322 2 111 2221
Q ss_pred --------cccccHHHHHHHHHHHHHHHHHHHHhhhccC--CcccCC----CCc--cCcccHHHHHHHHHHHHHHHHcCC
Q 037655 657 --------IGEVCRPIILDWLIAQHAHILEWTGRAFDLE--DWEPLS----FQQ--RQGASIIEVFRIIEETVDQFFGMN 720 (1125)
Q Consensus 657 --------iE~~~~~~V~~Wi~~~~~ki~ewV~rAiq~E--~W~P~s----~~e--~hSsSVVDIFrm~~Etvd~ffqL~ 720 (1125)
-.+.+..++.......-.++++|+.++.+.| .|.-.+ +++ -|++=.+++|.|+.|.++.+-..
T Consensus 319 ~~~l~p~l~~~~v~~Ll~~Y~~~~t~n~~ewl~~~~e~e~~~~~~~~~P~rd~~g~~~t~~p~~~fqmi~q~l~~~~~~- 397 (667)
T KOG2286|consen 319 LRALGPLLRPKHVVALLDLYLERATANMKEWLMNALELEAAAWAKETEPPRDEEGYLYTPGPVIFFQMITQQLQVAAAT- 397 (667)
T ss_pred hhhhcCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCccccccccCcccHHHHHhhHHHHHHHHhh-
Confidence 1234556777778888889999999999877 454422 333 47778899999999999988875
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCchhhhhhhhHHHhhcccccccccccccccccccccce
Q 037655 721 LPLDIIHLQALLSIIFHSLDAYLQRLLNQLVEQKHLYPSAPPLTRYEETVLPMLKKKLLEFTVLDKSVSEKLNELTIPKL 800 (1125)
Q Consensus 721 wp~~a~lL~aLs~Gid~~lq~Y~~~v~~~cgske~liP~~P~LTR~~~e~~~f~Kkkv~~~~~P~~~~~~~~~~~~~~~L 800 (1125)
. ++++--+-+.+..|+....+. |.++- .+-++.. |++ +.-+.+..
T Consensus 398 ---~----~Dl~~~~~~~~~~~v~~f~~~----------------~~~~~-~~~~e~~-----~~~------~~~~l~~y 442 (667)
T KOG2286|consen 398 ---S----SDLSGKILRSLLSEVPSFARN----------------YPKAQ-DEDQESH-----RRE------QPEGLREY 442 (667)
T ss_pred ---H----HHHHHHHHHHHHHHhHHHHHH----------------HHHhH-HHHHHhc-----hhc------ccccHHHH
Confidence 2 333333333344444433221 11100 0001110 111 01112222
Q ss_pred ee--eeccHHHHHHHHHHHHHHHHhhhcccCCccccccccccchhhhhhhcccCchhhhhHHHhHHHHHHHHHHHHHHHH
Q 037655 801 CI--RLNTLQYIQKQVSVLEEGIRKSWALVGPAVDQASAEGETEESLERNFLTSSEAVDELFITTLNIIRDTATGAIRKI 878 (1125)
Q Consensus 801 CV--rLNNLeyi~~qLd~LEk~I~~~w~~~~~~~~l~~a~~~t~~s~~~~l~~~~~~~~~~~~~~F~~ar~a~~~aI~~l 878 (1125)
|+ -.||+...+ .+...|.. .+-+....++...-++.|+..|
T Consensus 443 ~iA~~N~~~~~a~--------~~~~~~~~-----------------------------~d~~~~~l~~~~~i~~~~~~~l 485 (667)
T KOG2286|consen 443 LIANINNNLKMAM--------LMVNLKSK-----------------------------YDTLKGLLDGFIEIAKHGVSGL 485 (667)
T ss_pred HHHHHhchhHHHH--------HHHHHHhc-----------------------------cchhHHHhHHHHHHHHhHHHHH
Confidence 22 122222111 11111110 1123445556666677777777
Q ss_pred Hhhhhceeeeeccchhhhhhccccc-chhhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 037655 879 CDFIGARVVFWDLRDSFLCCLYRGS-VESARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYVWVLLDGGPS 957 (1125)
Q Consensus 879 ~e~ia~rlVF~Dlr~~~~d~LYvg~-Vs~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VLL~GGps 957 (1125)
.+ .+|.|+...| ..||-.. -..+..+-+...|+..|.-........ +.++|-++-.+++-.+++-|+.+-.+
T Consensus 486 ~e-----~~~~d~~~~~-~~lf~~~W~~g~~~~~Iv~T~~dy~~D~~~~~~~~-f~~fi~e~~~~~v~~Yl~~l~~kr~~ 558 (667)
T KOG2286|consen 486 LE-----EIFLDLQPLL-NKLFTKEWCAGSVTENIVATLDDYLPDFKELMGEY-FVRFIEEASLELVIEYLRALSKKRAS 558 (667)
T ss_pred HH-----HHHHHHHHHH-HHHhhhhhhchhhHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 77 4678888543 3333322 112556667777888888887777777 99999999999999999999887655
Q ss_pred CCCChhHHHHHHHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHHhhhcc-cHHHHHHHHHHhhhhhhcCCCCCCCCCCC
Q 037655 958 RAFSNSDITMMEDDLNTLKEFFIAGGEGLPRSLVEREAKYAEEILGLFTL-QSETLIRMLMSASENISLDLDPQNHGPMH 1036 (1125)
Q Consensus 958 R~Fs~~D~~~lEeDL~~Lk~fF~A~GEGLp~elVe~~~~~v~~vL~L~~~-~Te~LIe~f~~a~~~~~~g~~ppt~g~w~ 1036 (1125)
..+-.+.|.-|.+.|.+||---|. .++.....+.-+-.|++. +-+.++..+...-+. -++
T Consensus 559 ---~~~~~~~i~~d~~~~~~~f~~~~~-----~~~~~~~~~~~l~el~~~~d~d~~~~~~~~l~~~---YpD-------- 619 (667)
T KOG2286|consen 559 ---IQELIEKIKSDAETLYHFFRKYGS-----DVDTLISTISTLAELISLQDPDLIKLEVSTLLEC---YPD-------- 619 (667)
T ss_pred ---HHHHHHHHHhhHHHHHHHHHHhCc-----chhhhhhhhHHHHHHHhcCChHHHHHHHHHHHHH---CCC--------
Confidence 456778888999999999988887 444444444444444443 777777777665532 211
Q ss_pred CCCccceeeecccCCCch
Q 037655 1037 VEDANTLVRVLCHKKDRE 1054 (1125)
Q Consensus 1037 ~~d~nTILRVLChR~D~~ 1054 (1125)
...+.|-+||.-|+|=.
T Consensus 620 -~~~~~l~~il~~R~dls 636 (667)
T KOG2286|consen 620 -IPKDHLEAILKIRGDLS 636 (667)
T ss_pred -CcHHHHHHHHHHhcCCC
Confidence 34567888888887644
No 12
>KOG0412 consensus Golgi transport complex COD1 protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.60 E-value=23 Score=44.90 Aligned_cols=360 Identities=16% Similarity=0.202 Sum_probs=188.9
Q ss_pred cHHHHHHhhhhhcCCCCcccccccHHHHHHHHHHHHHHHHHHHHhhhccCCcccCCCCccCcccHH-HHHHHHHHHHHHH
Q 037655 638 SEDARLVLSAANKMFLFGQIGEVCRPIILDWLIAQHAHILEWTGRAFDLEDWEPLSFQQRQGASII-EVFRIIEETVDQF 716 (1125)
Q Consensus 638 t~d~~~VL~aAd~LE~Pf~iE~~~~~~V~~Wi~~~~~ki~ewV~rAiq~E~W~P~s~~e~hSsSVV-DIFrm~~Etvd~f 716 (1125)
.|++.+-++..++|...-.+-..+..++...|.--.=-+.+=|..||.-|..+-.+ . --+|+| |||-++...+---
T Consensus 401 d~e~~~~~~~~~~f~n~s~~~~~mQel~~~y~~LE~yfm~esv~kAi~ld~ye~~~--~-~~SSmVDDV~yivrk~irRA 477 (773)
T KOG0412|consen 401 DPEVRQELKCMKKFLNNSRVLTKMQELIRNYLLLEEYFMLESVQKAIKLDEYEDAG--Q-LTSSMVDDVFYIVRKCIRRA 477 (773)
T ss_pred CHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC--c-chhhhhhhHHHHHHHHHHHH
Confidence 45666666667666522223444445555555555556778889999999887433 2 335555 6999998887543
Q ss_pred HcCCCCccHHHHHHHHHHHHHHHH-HHHHHHHHhhhhccccCCCCCCCchhhhhhhhHHHhhcccccccccccccccccc
Q 037655 717 FGMNLPLDIIHLQALLSIIFHSLD-AYLQRLLNQLVEQKHLYPSAPPLTRYEETVLPMLKKKLLEFTVLDKSVSEKLNEL 795 (1125)
Q Consensus 717 fqL~wp~~a~lL~aLs~Gid~~lq-~Y~~~v~~~cgske~liP~~P~LTR~~~e~~~f~Kkkv~~~~~P~~~~~~~~~~~ 795 (1125)
+.= ....++.++.+-..++|+ .|...+.+.+- ++.. -..|-||--+..|-.-+..... |+ .
T Consensus 478 ~~T---~si~~~~a~iN~~~~~l~ndf~~~L~~kLr---s~~~--~~~sa~N~i~s~lq~~k~~~~d-~d---------~ 539 (773)
T KOG0412|consen 478 LST---SSIDSLCAFINEATALLDNDFLVALQSKLR---SIQG--GAASALNIIQSSLQAGKAEDED-AD---------L 539 (773)
T ss_pred Hhc---ccHHHHHHHHHHHHHHhcchHHHHHHHHHH---Hhhh--hhhhHHHHHHHHHHHHhccCcc-hh---------H
Confidence 321 223333343333333333 12222222110 0000 0011122111122111111101 11 1
Q ss_pred cccceeeeeccHHHHHHHHHHHHHHHHhhhcccCCccccccccccchhhhhhhcccCchhhhhHHHhHHHHHHHHHHHHH
Q 037655 796 TIPKLCIRLNTLQYIQKQVSVLEEGIRKSWALVGPAVDQASAEGETEESLERNFLTSSEAVDELFITTLNIIRDTATGAI 875 (1125)
Q Consensus 796 ~~~~LCVrLNNLeyi~~qLd~LEk~I~~~w~~~~~~~~l~~a~~~t~~s~~~~l~~~~~~~~~~~~~~F~~ar~a~~~aI 875 (1125)
....--|-|||++---.-+..|-+.+...|..+-+.. .++....+...+...+...|.. -++.|+
T Consensus 540 ~~~~fl~~LNn~~ls~eyi~~L~~~le~~~~~vf~~~------------~d~~~l~~~l~~l~~l~~~f~~---L~k~g~ 604 (773)
T KOG0412|consen 540 AKENFLTALNNADLSKEYIHTLKKTLESDCTEVFPQN------------FDRAKLKSCLSNLEALSLKFKD---LLKWGM 604 (773)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCh------------hhHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 1344567899997777777777777777777664411 2222222222223344455543 566666
Q ss_pred HHHHh-hhhceee-----eeccchhhhhhccccc-chhhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHH
Q 037655 876 RKICD-FIGARVV-----FWDLRDSFLCCLYRGS-VESARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYV 948 (1125)
Q Consensus 876 ~~l~e-~ia~rlV-----F~Dlr~~~~d~LYvg~-Vs~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL 948 (1125)
.++-. ++--|+- |..+.+.+-..=|... ..+.=+..++.-+++.+..+-.+++.++.+.++.=++--+.--++
T Consensus 605 ~~Lf~~~lkpRi~~~id~f~~is~~ls~edy~~~ea~d~~Vq~fl~~v~~l~~~~k~~ltp~nY~sLlsl~~~~ia~~LE 684 (773)
T KOG0412|consen 605 EQLFSTVLKPRIRPWIDTFVNISYNLSEEDYAAYEANDPWVQQFLSSVEQLLAELKNSLTPENYDSLLSLIVDEIATQLE 684 (773)
T ss_pred HHHHHHHhHHhHhhhhhhhhhhhccccHHHHhhhccCChHHHHHHHHHHHHHHhhhcccChhhHHHHHHHHHHHHHHHHH
Confidence 65533 1112211 4444444433334432 223347778888888887777777777666555444444444444
Q ss_pred HHHhcCCCCCCCChhHHHHHHHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhhhhhhcCCC
Q 037655 949 WVLLDGGPSRAFSNSDITMMEDDLNTLKEFFIAGGEGLPRSLVEREAKYAEEILGLFTLQSETLIRMLMSASENISLDLD 1028 (1125)
Q Consensus 949 ~VLL~GGpsR~Fs~~D~~~lEeDL~~Lk~fF~A~GEGLp~elVe~~~~~v~~vL~L~~~~Te~LIe~f~~a~~~~~~g~~ 1028 (1125)
.++.-- .|++-=.--++.|++.|-.+|+..- ...+.|+. .++.+|+.|..++++.=+=+|+.
T Consensus 685 ~~i~k~----~FNrlG~lqLDre~r~lis~lt~~t---~~~lRdKf-~RLtQIatLLnle~~se~le~w~---------- 746 (773)
T KOG0412|consen 685 QIIWKI----QFNRLGGLQLDRELRALISYLTGVT---QWNLRDKF-ARLTQIATLLNLEKDSEILEYWG---------- 746 (773)
T ss_pred HHHHHh----HHHhhcchHhhHHHHHHHHHhhccc---chhHHHHH-HHHHHHHHHHcccccchHHHhcC----------
Confidence 444311 1122222357889999999998432 46666664 67889999988888764444431
Q ss_pred CCCCCC--CCCCCccceeeecccCCCc
Q 037655 1029 PQNHGP--MHVEDANTLVRVLCHKKDR 1053 (1125)
Q Consensus 1029 ppt~g~--w~~~d~nTILRVLChR~D~ 1053 (1125)
|.+|. |. -.|+-+-+||-.|.|-
T Consensus 747 -~~~g~~twr-Lt~~EVr~vl~lr~df 771 (773)
T KOG0412|consen 747 -PNSGPLTWR-LTPAEVRKVLALRIDF 771 (773)
T ss_pred -CCCCCceEE-eCHHHHHHHHHhhccC
Confidence 22443 76 6777788888888774
No 13
>PF06292 DUF1041: Domain of Unknown Function (DUF1041); InterPro: IPR010439 This entry represents Calcium-dependent secretion activators that are involved in the exocytosis of vesicles filled with neurotransmitters and neuropeptides. They also may specifically mediate the Ca2+-dependent exocytosis of large dense-core vesicles (DCVs) and other dense-core vesicles by acting as a PtdIns(4,5)P2-binding protein that acts at prefusion step following ATP-dependent priming and participates in DCVs-membrane fusion []. However, it probably also participates in small clear synaptic vesicles (SVs) exocytosis and it is unclear whether its function is related to Ca2+ triggering []. This protein is often found in tandem repeats and co-occur with C2 domains IPR000008 from INTERPRO, Protein kinase C, phorbol ester/diacylglycerol binding regions IPR002219 from INTERPRO and PH domains IPR001849 from INTERPRO.
Probab=78.03 E-value=8.3 Score=38.16 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhccchhhh--hccchhhHhHHHHHHHHHhhhHHHHh
Q 037655 580 HPLALLANELRSIAERELTVFWPAICH--WCSEALTISAIMLHHFYREILKPFLQ 632 (1125)
Q Consensus 580 ~vL~~Lak~i~~La~ke~~~fSPiL~r--whP~a~~Vaa~~Lh~~yg~~Lk~fl~ 632 (1125)
.....||.-+..+-+-.++.|+|+|.. |-|..+.+.|-++=.+|..|++..|+
T Consensus 50 e~w~~L~eL~v~vleed~e~y~~vln~F~~~~~l~~~hAE~fWsLfa~Dm~~aLe 104 (106)
T PF06292_consen 50 EFWIRLIELCVSVLEEDKEHYAPVLNQFPWELDLGVEHAEIFWSLFAVDMDAALE 104 (106)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhHhhhchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 445778888888888999999999976 77899999999999999999998775
No 14
>PF14923 CCDC142: Coiled-coil protein 142
Probab=74.09 E-value=11 Score=45.58 Aligned_cols=96 Identities=16% Similarity=0.129 Sum_probs=79.5
Q ss_pred hcccccchhhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHH
Q 037655 898 CLYRGSVESARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYVWVLLDGGPSRAFSNSDITMMEDDLNTLKE 977 (1125)
Q Consensus 898 ~LYvg~Vs~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VLL~GGpsR~Fs~~D~~~lEeDL~~Lk~ 977 (1125)
+.|++.+.+.-+.|+++.+. .+.++++--+++.+++|+.+++|--||.-+. -||.+=.--+..||...++
T Consensus 275 S~Yv~~~v~~vl~PVl~g~q--------~L~~~aq~~~l~~~l~a~~eAWLdhIl~~kI--KFS~~GAlQL~~DF~~Vr~ 344 (450)
T PF14923_consen 275 SEYVEYVVETVLEPVLQGVQ--------GLPPEAQIPALSQALTAMLEAWLDHILMHKI--KFSLQGALQLRQDFGYVRD 344 (450)
T ss_pred cHHHHHHHHHHHHHHHHHhc--------CCChHHHHHHHHHHHHHHHHHHHHHHHHccc--eeeHHHHHHHHHHHHHHHH
Confidence 66777777777888777665 6778899999999999999999999998643 3788888899999999999
Q ss_pred hhhcCCCCCcHHHHHHH-----HHHHHHHHh
Q 037655 978 FFIAGGEGLPRSLVERE-----AKYAEEILG 1003 (1125)
Q Consensus 978 fF~A~GEGLp~elVe~~-----~~~v~~vL~ 1003 (1125)
+-..+--||..|+.+.- .+.+++++.
T Consensus 345 wl~~e~~~Ls~e~rq~Ll~l~v~r~~dgv~~ 375 (450)
T PF14923_consen 345 WLESECSGLSPELRQTLLSLEVFRRCDGVGL 375 (450)
T ss_pred HHHhhhccCCHHHHHHHhccHHHHHHHHHHH
Confidence 99999999998888765 555666666
No 15
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [].
Probab=45.51 E-value=6.2e+02 Score=30.47 Aligned_cols=263 Identities=13% Similarity=0.118 Sum_probs=134.3
Q ss_pred chHHHHHHHHHHHhhCCCCCCChhhHHHHHHHHHHHhhcccCchhhHHHHHHHhhccCCCcccC--cccccchhhhhhhc
Q 037655 396 LIEEADAIMSLIKLTWPTLGITQKMHYGIFAWVLFQQFVGTGEGMLLEYAVLELQKVSPTEEDD--GKEVQYINNIICSR 473 (1125)
Q Consensus 396 l~eE~dElLelik~tW~iLgit~~~Hnvcf~wVlF~qyV~tge~dlL~aA~~~l~ev~~d~~~~--~~~~~y~~~l~~~~ 473 (1125)
-.++++.++..|++-=+-|.+ .=+|++.+=.++++. -.|-.|..+|+......+=+ ..-=.-++.|...+
T Consensus 79 kA~~sE~~V~~it~dIk~LD~--AKrNLT~SIT~LkrL------~MLv~a~~qL~~~~~~r~Y~e~a~~L~av~~L~~~F 150 (383)
T PF04100_consen 79 KAEESEQMVQEITRDIKQLDN--AKRNLTQSITTLKRL------QMLVTAVEQLKELAKKRQYKEIASLLQAVKELLEHF 150 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 445666666666543222222 235666666666654 44555666666555432100 00001123333345
Q ss_pred ccCCccccHHHHHHHHHHHHHHHHHHHhH-HhhhcCCCCc---c--hhhHHHHHHHHhhhcCCCchhhhhhccCccchHH
Q 037655 474 KLNDRKDNLSLLQAIFVSISIWCDSKLQD-YHRHFSQEPS---N--FKRVMALASTVGVFTPGDCAEIKLTKLHTSNDNA 547 (1125)
Q Consensus 474 ~~~~t~~d~~ll~s~LssI~~w~~krL~d-yH~~f~~~~~---~--me~i~~v~~~~~~il~eD~~~~~~~~~~~~~~~~ 547 (1125)
+.--+++.+.-|..-+..|+.=+..++.. |+..|+.+.. . ...+-..+.++. .|+. .+
T Consensus 151 ~~yksi~~I~~L~~~i~~l~~~L~~qI~~df~~~f~~~~~~~~~~~~~~l~~aC~vvd-~L~~---------------~~ 214 (383)
T PF04100_consen 151 KPYKSIPQIAELSKRIDQLQNELKEQIFEDFEELFGSQGDESPGQSSQQLSDACLVVD-ALGP---------------DV 214 (383)
T ss_pred HcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchHhHHHHHHHHHH-HcCc---------------hH
Confidence 55556777888888888888887766654 5555743221 1 122323332222 2221 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccc-ccccccCchHHHHHHHHHHHHHHHHhhhccchh-hhhccchhhHhHHHHHHHHHh
Q 037655 548 ARKVKGYVEKSIETACRQVASTID-LESKVQRSHPLALLANELRSIAERELTVFWPAI-CHWCSEALTISAIMLHHFYRE 625 (1125)
Q Consensus 548 ~~~vd~yIrsS~~~af~~~le~~~-~~~~~e~~~vL~~Lak~i~~La~ke~~~fSPiL-~rwhP~a~~Vaa~~Lh~~yg~ 625 (1125)
++.+-++.....-.-|.++-...+ ...-++...--+-+-+-+.. -...|+.+| ..|+ +.-.=+..++..=-.
T Consensus 215 r~~li~wf~~~qL~eY~~iF~~~~e~~~Ld~i~RRy~Wfkr~L~~----~e~~~~~iFP~~W~--v~~~L~~~Fc~~Tr~ 288 (383)
T PF04100_consen 215 REELIDWFCNKQLKEYRRIFRENDEAASLDNIDRRYAWFKRLLKN----FEEKFANIFPPSWR--VPERLCVEFCEITRK 288 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccccchhhHHHHHHHHHHHHHH----HHhhccccCCCcCc--HHHHHHHHHHHHHHH
Confidence 333333333344445666553211 11111111111112222222 222355554 3376 444444455555566
Q ss_pred hhHHHHhhhhhccHHHHHH---hhhhhcCC------C-----------------------CcccccccHHHHHHHHHHHH
Q 037655 626 ILKPFLQGVTSLSEDARLV---LSAANKMF------L-----------------------FGQIGEVCRPIILDWLIAQH 673 (1125)
Q Consensus 626 ~Lk~fl~~v~~lt~d~~~V---L~aAd~LE------~-----------------------Pf~iE~~~~~~V~~Wi~~~~ 673 (1125)
+|...|++.. -+.++.-. |+..-.|| | .--|-+.|.||+.-|++.+.
T Consensus 289 dL~~iL~~~~-~~~dv~~Ll~aLq~T~~FE~~L~~rF~~~~~~~~~~~~~~e~~~~~~~f~g~IS~~FepyL~iyv~~qd 367 (383)
T PF04100_consen 289 DLSEILSKRK-SELDVKLLLKALQKTLEFEKELAKRFAGSTDESQEIEKKKEMKEIAENFKGIISSCFEPYLSIYVDSQD 367 (383)
T ss_pred HHHHHHhhcC-CCCcHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccchHHhhHhhHHHHHHHHH
Confidence 7777775532 23343333 33333444 2 12388899999999999999
Q ss_pred HHHHHHHHhhhccCCc
Q 037655 674 AHILEWTGRAFDLEDW 689 (1125)
Q Consensus 674 ~ki~ewV~rAiq~E~W 689 (1125)
..+.+.+.+.++.++|
T Consensus 368 k~L~~~l~~~~~~~~w 383 (383)
T PF04100_consen 368 KNLSEKLDKFISEEKW 383 (383)
T ss_pred HHHHHHHHHHHhhcCC
Confidence 9999999999999999
No 16
>PF15080 DUF4547: Domain of unknown function (DUF4547)
Probab=43.85 E-value=18 Score=38.21 Aligned_cols=98 Identities=16% Similarity=0.220 Sum_probs=74.0
Q ss_pred hhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHhhhcCCCC
Q 037655 906 SARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYVWVLLDGGPSRAFSNSDITMMEDDLNTLKEFFIAGGEG 985 (1125)
Q Consensus 906 ~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VLL~GGpsR~Fs~~D~~~lEeDL~~Lk~fF~A~GEG 985 (1125)
..|+..-|+-|..-|-.+++++--.++|.=|+-+|...+ +++.+=|.|..+|--||+|.|.-
T Consensus 70 ht~VlEkLPdL~r~LPTlASvLrrKvkN~~Ir~vwesvL------------------ee~GLqE~dv~aLCtFfiahgnk 131 (196)
T PF15080_consen 70 HTRVLEKLPDLVRGLPTLASVLRRKVKNKRIRVVWESVL------------------EECGLQEGDVTALCTFFIAHGNK 131 (196)
T ss_pred HHHHHHHhhHHHhCcchHHHHHHHHhhchHHHHHHHHHH------------------HHcCCCcccHHHHHHHHHHhcch
Confidence 678888899999999999999999999999988887776 44566688999999999999873
Q ss_pred ---CcHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhhhh
Q 037655 986 ---LPRSLVEREAKYAEEILGLFTLQSETLIRMLMSASEN 1022 (1125)
Q Consensus 986 ---Lp~elVe~~~~~v~~vL~L~~~~Te~LIe~f~~a~~~ 1022 (1125)
.+..+..-....+--.+.-|-.+ ..|-+-+.+|.+-
T Consensus 132 aehy~a~~R~~yi~dv~~mItnmVkN-qalq~~llrAvqv 170 (196)
T PF15080_consen 132 AEHYAAKVRQMYIRDVTFMITNMVKN-QALQDGLLRAVQV 170 (196)
T ss_pred HhHhHHHHHHHHHhhHHHHHHHHHhh-HHHHHHHHHHHHH
Confidence 36666666666666666555432 3445556666643
No 17
>PF12854 PPR_1: PPR repeat
Probab=32.31 E-value=63 Score=25.09 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=25.5
Q ss_pred cCCCCCHHHHHHHHHhhhcccCcccchHHHHHHHHHHH
Q 037655 371 AAYHLNIRLYEKLLFGMFDVLDECQLIEEADAIMSLIK 408 (1125)
Q Consensus 371 dgyPlN~rlY~~LL~~~FD~~de~~l~eE~dElLelik 408 (1125)
.|++||+..|-.|+.+.--.. -++|+-+|+++++
T Consensus 1 ~G~~Pd~~ty~~lI~~~Ck~G----~~~~A~~l~~~M~ 34 (34)
T PF12854_consen 1 RGCEPDVVTYNTLIDGYCKAG----RVDEAFELFDEMK 34 (34)
T ss_pred CCCCCcHhHHHHHHHHHHHCC----CHHHHHHHHHhCc
Confidence 489999999999999873321 2378888887763
No 18
>PF01031 Dynamin_M: Dynamin central region; InterPro: IPR000375 Dynamin is a microtubule-associated force-producing protein of 100 Kd which is involved in the production of microtubule bundles. At the N terminus of dynamin is a GTPase domain (see IPR001401 from INTERPRO), and at the C terminus is a PH domain (see IPR001849 from INTERPRO). Between these two domains lies a central region of unknown function, which this entry represents.; GO: 0005525 GTP binding; PDB: 3ZVR_A 2AKA_B 2X2F_D 2X2E_D 3SNH_A 3ZYS_D 3ZYC_D 1JWY_B 1JX2_B 3SZR_A ....
Probab=32.10 E-value=8.1e+02 Score=27.91 Aligned_cols=171 Identities=11% Similarity=0.090 Sum_probs=85.4
Q ss_pred HHHHHhHHhhhcCCCCcchhhHHHHHHHHhhhcCCCchhhhhhccCccchHHHHHHHHHHHHHHHHHHHHHhhcccccc-
Q 037655 496 CDSKLQDYHRHFSQEPSNFKRVMALASTVGVFTPGDCAEIKLTKLHTSNDNAARKVKGYVEKSIETACRQVASTIDLES- 574 (1125)
Q Consensus 496 ~~krL~dyH~~f~~~~~~me~i~~v~~~~~~il~eD~~~~~~~~~~~~~~~~~~~vd~yIrsS~~~af~~~le~~~~~~- 574 (1125)
.|++.+.-|-+|.. +...-++-.++--+.++|.+.... .--.|..-|...+..+=.++-.-+.+..
T Consensus 39 ~E~~fF~~~~~~~~-~~~~~G~~~L~~~L~~~L~~~I~~------------~LP~l~~~I~~~l~~~~~eL~~lG~~~~~ 105 (295)
T PF01031_consen 39 KEKEFFSNHPWYSS-PADRCGTPALRKRLSELLVEHIRK------------SLPSLKSEIQKKLQEAEKELKRLGPPRPE 105 (295)
T ss_dssp HHHHHHHHSTTTGG-GGGGSSHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHTHHHCSSS
T ss_pred HHHHHHhcccccCC-cccccchHHHHHHHHHHHHHHHHH------------hCcHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 47778888877876 544555666666676666542211 1222445555555555444322222222
Q ss_pred -cccCchHHHHHHHHHHHHHHHHhh-hccchhhhhccchhh--HhHHHHHHHHHhhhHHHHhhhhhcc-HHHHHHhhhhh
Q 037655 575 -KVQRSHPLALLANELRSIAERELT-VFWPAICHWCSEALT--ISAIMLHHFYREILKPFLQGVTSLS-EDARLVLSAAN 649 (1125)
Q Consensus 575 -~~e~~~vL~~Lak~i~~La~ke~~-~fSPiL~rwhP~a~~--Vaa~~Lh~~yg~~Lk~fl~~v~~lt-~d~~~VL~aAd 649 (1125)
.++....|..+...-......-.+ .|+.-+ -.++..+ -....+|..|+..+..+-. ...++ .++...++.+.
T Consensus 106 ~~~~~~~~l~~~~~~f~~~~~~~i~G~~~~~~--~~~~l~~~ari~~~f~~~~~~~~~~~~~-~~~~~~~eI~~~i~~~~ 182 (295)
T PF01031_consen 106 TPEEQRAYLLQIISKFSRIFKDAIDGEYSDEF--STNELRGGARIRYIFNEWFDKFLEKIDP-FEDLSDEEIRTAIRNSR 182 (295)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTT---------TTS--HHHHHHHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHH--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--cccccchhhHHHHHHHhhhhhhhhhhcc-ccchhHHHHHHHHHhhc
Confidence 224444555555555555444443 333211 1112222 2223456666666655221 22233 68999999999
Q ss_pred cCC-CCcccccccHHHHHHHHHHHHHHHHHHHHh
Q 037655 650 KMF-LFGQIGEVCRPIILDWLIAQHAHILEWTGR 682 (1125)
Q Consensus 650 ~LE-~Pf~iE~~~~~~V~~Wi~~~~~ki~ewV~r 682 (1125)
+-+ +.|--+..|..+|++.++.-..-..+||+.
T Consensus 183 G~elp~f~p~~afe~Li~~~i~~l~~Pa~~cv~~ 216 (295)
T PF01031_consen 183 GRELPGFVPESAFESLIRKQIEKLEEPALQCVEE 216 (295)
T ss_dssp S-SSS-SCCHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 988 444456788888888777555555555444
No 19
>PF10474 DUF2451: Protein of unknown function C-terminus (DUF2451); InterPro: IPR019514 This protein is found in eukaryotes but its function is not known. The N-terminal domain of some members is PF10475 from PFAM (DUF2450).
Probab=30.26 E-value=5.7e+02 Score=28.71 Aligned_cols=170 Identities=14% Similarity=0.169 Sum_probs=84.0
Q ss_pred cccceeeeeccHHHHHHHHHHHHHHHHhhhcccCCccccccccccchhhhhhhcccCchhhhhHHHhHHHHHHHHHHHHH
Q 037655 796 TIPKLCIRLNTLQYIQKQVSVLEEGIRKSWALVGPAVDQASAEGETEESLERNFLTSSEAVDELFITTLNIIRDTATGAI 875 (1125)
Q Consensus 796 ~~~~LCVrLNNLeyi~~qLd~LEk~I~~~w~~~~~~~~l~~a~~~t~~s~~~~l~~~~~~~~~~~~~~F~~ar~a~~~aI 875 (1125)
+.++=+|..-++-++-.+++.+...+..-.. + . ..+.+...|..+-..+.+.-
T Consensus 3 gL~eRiVA~ESl~fLa~~l~~~~p~l~~lLp---~-~-----------------------~~~~l~~Fy~~tv~~v~dLr 55 (234)
T PF10474_consen 3 GLAERIVAVESLSFLARQLESLRPYLESLLP---P-N-----------------------KRDFLEQFYSQTVSAVPDLR 55 (234)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHcC---c-c-----------------------chHHHHHHHHHHHHHHHHHH
Confidence 3455567777888888888888776643321 1 0 12345666666666666666
Q ss_pred HHHHhhhhceeeeeccchhh-------hhhcccccchhhhHHHhHHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHHHH
Q 037655 876 RKICDFIGARVVFWDLRDSF-------LCCLYRGSVESARLESFLTHIDTVLDHICSLI-DDSLRDFVVLSICRASLEGY 947 (1125)
Q Consensus 876 ~~l~e~ia~rlVF~Dlr~~~-------~d~LYvg~Vs~~RIeplL~~Ld~~L~~l~s~l-~d~~r~rvv~~vmkAs~e~f 947 (1125)
.++...+|.+++ |+.... ||-=.++.=.+.-+..+++.+...=..|.++. ....-..+...+|..++..+
T Consensus 56 ~~iy~~~a~~~l--~~~~i~~~Ia~vKWdvkev~~qhs~YVd~l~~~~~~f~~rL~~i~~~~~i~~~~~~~lw~~~i~~~ 133 (234)
T PF10474_consen 56 EPIYKCVASRLL--DLEQILNSIANVKWDVKEVMSQHSSYVDQLVQEFQQFSERLDEISKQGPIPPEVQNVLWDRLIFFA 133 (234)
T ss_pred HHHHHHHHHHHc--CHHHHHHHHHHcCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 666665555544 333211 21111111113334444444433322221111 11222335555556666666
Q ss_pred HHHHhcCCCC-CCCChhHHHHHHHHHHHHHHhhhcC-CCC-Cc-HHHHHHH
Q 037655 948 VWVLLDGGPS-RAFSNSDITMMEDDLNTLKEFFIAG-GEG-LP-RSLVERE 994 (1125)
Q Consensus 948 L~VLL~GGps-R~Fs~~D~~~lEeDL~~Lk~fF~A~-GEG-Lp-~elVe~~ 994 (1125)
..+|+.|=.. +--|.+--..|.-||+.+..-+-.= |-+ .| .+.||..
T Consensus 134 ~~~Lveg~s~vkKCs~eGRalM~lD~q~~~~~le~l~~~~~~p~~~~Ve~Y 184 (234)
T PF10474_consen 134 FETLVEGYSRVKKCSNEGRALMQLDFQQLQNKLEKLSGIRPIPNREYVENY 184 (234)
T ss_pred HHHHHHHHHhccCCChhhHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 5666654432 3345555566666777666665322 222 23 3555554
No 20
>PF09763 Sec3_C: Exocyst complex component Sec3; InterPro: IPR019160 The exocyst complex is composed of 8 subunits: Exoc1, Exoc2, Exoc3, Exoc4, Exoc5, Exoc6, Exoc7 and Exoc8. This entry represents the subunit Exoc1 (Sec3). Sec3 binds to the C-terminal cytoplasmic domain of GLYT1 (glycine transporter protein 1). Sec3 is the exocyst component that is closest to the plasma membrane docking site and it serves as a spatial landmark in the plasma membrane for incoming secretory vesicles. Sec3 is recruited to the sites of polarised membrane growth through its interaction with Rho1p, a small GTP-binding protein.
Probab=27.54 E-value=1.4e+03 Score=29.40 Aligned_cols=200 Identities=11% Similarity=0.105 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHHHHHhHHhhhcCCCCcchhhHHHHHHHHhhhcCCCchhhhhhccCccchHHHHHHHHHHHHHHHHH
Q 037655 483 SLLQAIFVSISIWCDSKLQDYHRHFSQEPSNFKRVMALASTVGVFTPGDCAEIKLTKLHTSNDNAARKVKGYVEKSIETA 562 (1125)
Q Consensus 483 ~ll~s~LssI~~w~~krL~dyH~~f~~~~~~me~i~~v~~~~~~il~eD~~~~~~~~~~~~~~~~~~~vd~yIrsS~~~a 562 (1125)
.-+.++++.|.+.+..+|..+-++.....+ + ..+++++.+++++.+-. .....|-..+=.-+...++..
T Consensus 385 ~~~~~~m~~iF~~l~~~l~~~v~~~~~~dp-~-~~~~~l~~le~~~~~~~---------~s~~~fl~~~L~~l~~~~k~~ 453 (701)
T PF09763_consen 385 KDVRQMMSEIFGFLENELQSFVDWAEKNDP-L-QCVSMLVYLERYIKSLE---------QSNQSFLSNLLQKLQVRLKRL 453 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCc-h-hHHHHHHHHHHHHHHhc---------CchHHHHHHHHHHHHHHHHHH
Confidence 478889999999999999999999644443 2 45666777777664311 111124444444444555555
Q ss_pred HHHHhhcccccccccCchHHHHHHHHHHHHHHHHhhhccchhhhhccchhhHhHHHHHHHHHhhhHHHHhhhhhccHHHH
Q 037655 563 CRQVASTIDLESKVQRSHPLALLANELRSIAERELTVFWPAICHWCSEALTISAIMLHHFYREILKPFLQGVTSLSEDAR 642 (1125)
Q Consensus 563 f~~~le~~~~~~~~e~~~vL~~Lak~i~~La~ke~~~fSPiL~rwhP~a~~Vaa~~Lh~~yg~~Lk~fl~~v~~lt~d~~ 642 (1125)
|.+.++.-. +.|+. .++. ... ..||-+.. ..++.|+..++.+
T Consensus 454 f~~fv~~Qi---------------~~ie~-----~k~~-----~k~--r~GVl~~i------~~fp~f~~~~E~~----- 495 (701)
T PF09763_consen 454 FDKFVDEQI---------------KSIEE-----TKVS-----KKK--RKGVLPFI------KKFPEFVKRVESM----- 495 (701)
T ss_pred HHHHHHHHH---------------HHHHH-----hccc-----cCC--CCccchHH------HHHHHHHHHHHHH-----
Confidence 666553221 11221 1111 111 12444432 4678888887764
Q ss_pred HHhhhhhcCCCCcccc-cccHHHHHHHHHHHHHHHHHHHHhhhccCCcccCC---------CCccCcccHHHHHHHHHHH
Q 037655 643 LVLSAANKMFLFGQIG-EVCRPIILDWLIAQHAHILEWTGRAFDLEDWEPLS---------FQQRQGASIIEVFRIIEET 712 (1125)
Q Consensus 643 ~VL~aAd~LE~Pf~iE-~~~~~~V~~Wi~~~~~ki~ewV~rAiq~E~W~P~s---------~~e~hSsSVVDIFrm~~Et 712 (1125)
+..+ -. .....+|.+|...-..-+.+|+++.-+ ..|.. .+..+..+.++=|.-+
T Consensus 496 --~~~~--------~~~~~~r~~vd~aY~kl~~a~~~~l~~~a~---~~~~~~~~~~~~dk~~~~~~v~~leN~~~~--- 559 (701)
T PF09763_consen 496 --FSGA--------ERAREDRSLVDKAYEKLVRAMFDSLERIAK---LSPKNSGSQDPEDKEKLNYHVVLLENYHHF--- 559 (701)
T ss_pred --Hccc--------cccchHHHHHHHHHHHHHHHHHHHHHHhcc---cCcccccccCccccccchhhHHHHHHHHHH---
Confidence 1111 11 334556777777777777778877643 33332 1223333444444444
Q ss_pred HHHHHcCCC-CccHHHHHHHHHHHHHHHHHHHHHHH
Q 037655 713 VDQFFGMNL-PLDIIHLQALLSIIFHSLDAYLQRLL 747 (1125)
Q Consensus 713 vd~ffqL~w-p~~a~lL~aLs~Gid~~lq~Y~~~v~ 747 (1125)
++.+..++. +.-..+.+..-.-.+..++.|+..+.
T Consensus 560 ~e~l~~~~~~~~l~~~~~~A~~~~~~~~~~Y~~~~l 595 (701)
T PF09763_consen 560 YEELSQLKINSVLEEFRKEAKQIYDEHLEAYVTFLL 595 (701)
T ss_pred HHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555665 66777777777778888888888753
No 21
>KOG0433 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=24.80 E-value=2.3e+02 Score=36.87 Aligned_cols=103 Identities=17% Similarity=0.235 Sum_probs=63.9
Q ss_pred cceeeeeccH----HHHHHHHHHHHHHHHhhhcccCCccccccccccchhhhhhhcccCchhhhhHHHhHHHHHHHHHHH
Q 037655 798 PKLCIRLNTL----QYIQKQVSVLEEGIRKSWALVGPAVDQASAEGETEESLERNFLTSSEAVDELFITTLNIIRDTATG 873 (1125)
Q Consensus 798 ~~LCVrLNNL----eyi~~qLd~LEk~I~~~w~~~~~~~~l~~a~~~t~~s~~~~l~~~~~~~~~~~~~~F~~ar~a~~~ 873 (1125)
.+.-|.+++| +|++.+|+++.+.|.+.+.. -.+...+...+..+++
T Consensus 689 ~~~~~p~~dl~~iDq~~L~ql~~~~~~i~e~Y~~------------------------------Y~f~kVv~~lq~F~~~ 738 (937)
T KOG0433|consen 689 KQVKFPLKDLRYIDQYMLQQLDAIVKRIIELYND------------------------------YKFRKVVNDLQQFLQR 738 (937)
T ss_pred ccccccchhhhhhhHHHHHHHHHHHHHHHHHHHh------------------------------ccHHHHHHHHHHHHHH
Confidence 4466788888 79999999999988765421 1222333333333322
Q ss_pred HHHHHHhhhhceeeeeccchhhhhhcccccchhhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q 037655 874 AIRKICDFIGARVVFWDLRDSFLCCLYRGSVESARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRAS 943 (1125)
Q Consensus 874 aI~~l~e~ia~rlVF~Dlr~~~~d~LYvg~Vs~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs 943 (1125)
.|+. .++|+-+ |.||-+.+.+..-+..=..|-.+|..++.++..- -+.++-+|||-+
T Consensus 739 ---~lSa------~YfdivK---DRLY~~~~~s~~rrs~QttL~h~l~~l~~~iaPI-lP~LaeEvwq~l 795 (937)
T KOG0433|consen 739 ---NLSA------FYFDIVK---DRLYCDKVGSESRRSAQTTLHHLLHNLAHIISPI-LPHLAEEVWQHL 795 (937)
T ss_pred ---HhhH------HHHHHHh---hhhhcCCCCcHHHHHHHHHHHHHHHHHHHHHccc-cHHHHHHHHHhC
Confidence 1222 2344333 7899999887776666667777777777766543 466776777653
No 22
>PF12896 Apc4: Anaphase-promoting complex, cyclosome, subunit 4; InterPro: IPR024790 Apc4 is one of the larger of the subunits of the anaphase-promoting complex (APC) or cyclosome. The anaphase-promoting complex is a multiprotein subunit E3 ubiquitin ligase complex that controls segregation of chromosomes and exit from mitosis in eukaryotes [, ]. Results in Caenorhabditis elegans show that the primary essential role of the spindle assembly checkpoint is not in the chromosome segregation process itself but rather in delaying anaphase onset until all chromosomes are properly attached to the spindle. The APC is likely to be required for all metaphase-to-anaphase transitions in a multicellular organism []. This entry represents the long domain downstream of the WD40 repeat/s that are present on the Apc4 subunits.
Probab=24.19 E-value=4.9e+02 Score=27.98 Aligned_cols=83 Identities=27% Similarity=0.371 Sum_probs=54.4
Q ss_pred hhhHHHhHHHHHHHHHHHHhhhhhhhH--HHHHHHHHHHHH---------HHHHHHHhcCCCCCCCChhHHHHHHHHHHH
Q 037655 906 SARLESFLTHIDTVLDHICSLIDDSLR--DFVVLSICRASL---------EGYVWVLLDGGPSRAFSNSDITMMEDDLNT 974 (1125)
Q Consensus 906 ~~RIeplL~~Ld~~L~~l~s~l~d~~r--~rvv~~vmkAs~---------e~fL~VLL~GGpsR~Fs~~D~~~lEeDL~~ 974 (1125)
...|..+++|+++.+..++....+... ++-+..+.+.+- +.|+-.++-|.++ ..
T Consensus 26 ~~~i~~ll~yi~~~l~~i~~~w~~~~~~~~~~l~~~~~~l~~~~~~~~~~~el~~lLltG~~s---------------~~ 90 (210)
T PF12896_consen 26 SSQIQSLLRYIKDTLDAIQEEWEEALQEFDRKLTNLADELQEKGGEGSLQDELLDLLLTGHAS---------------PA 90 (210)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCC---------------HH
Confidence 677999999999999999998855443 334444443211 3455555556555 45
Q ss_pred HHHhhhcC-CC-CC--cHHHHHHHHHHHHHHHh
Q 037655 975 LKEFFIAG-GE-GL--PRSLVEREAKYAEEILG 1003 (1125)
Q Consensus 975 Lk~fF~A~-GE-GL--p~elVe~~~~~v~~vL~ 1003 (1125)
|++||... || |+ =+-.++..|+.++.++-
T Consensus 91 l~~fL~~~l~erglKr~~k~~~~~y~~i~~l~~ 123 (210)
T PF12896_consen 91 LKQFLVNQLGERGLKRWEKAVDSAYSSIRKLLF 123 (210)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 77777644 77 56 44566777777776665
No 23
>KOG4654 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.37 E-value=4.2e+02 Score=29.14 Aligned_cols=84 Identities=20% Similarity=0.338 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHhhhhhhhH-HHHHHHHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHhhhcCCCCC---cHH
Q 037655 914 THIDTVLDHICSLIDDSLR-DFVVLSICRASLEGYVWVLLDGGPSRAFSNSDITMMEDDLNTLKEFFIAGGEGL---PRS 989 (1125)
Q Consensus 914 ~~Ld~~L~~l~s~l~d~~r-~rvv~~vmkAs~e~fL~VLL~GGpsR~Fs~~D~~~lEeDL~~Lk~fF~A~GEGL---p~e 989 (1125)
.++.-+-..||+..-++.| .---.++|+|+|. ||-.+.+-- .--.-..|+-.+-+=+-.|-.+|+++||.+ |.+
T Consensus 47 ~c~q~Vhk~lc~~kkc~iRl~Y~W~ELW~aL~n-~L~Flmsne-~~llak~dif~La~lIldlf~mfIs~GDafl~~pde 124 (252)
T KOG4654|consen 47 LCFQFVHKALCSLKKCGIRLEYHWLELWRALFN-FLDFLMSNE-INLLAKEDIFRLAELILDLFAMFISNGDAFLIRPDE 124 (252)
T ss_pred HHHHHHHHHHHHHHhhcceeeeHHHHHHHHHHH-HHHHHHHhH-hhhcchhhHHHHHHHHHHHHHHHHhCCCeeeeCchH
Confidence 4445555667777666766 4456789999883 222222110 111124667777777778889999999986 889
Q ss_pred HHHHHHHHHH
Q 037655 990 LVEREAKYAE 999 (1125)
Q Consensus 990 lVe~~~~~v~ 999 (1125)
++|-.|+-+.
T Consensus 125 ~ddLfYeii~ 134 (252)
T KOG4654|consen 125 LDDLFYEIIH 134 (252)
T ss_pred HHHHHHHHHH
Confidence 9988887665
No 24
>PF08385 DHC_N1: Dynein heavy chain, N-terminal region 1; InterPro: IPR013594 Dynein heavy chains interact with other heavy chains to form dimers, and with intermediate chain-light chain complexes to form a basal cargo binding unit []. The region featured in this family includes the sequences implicated in mediating these interactions []. It is thought to be flexible and not to adopt a rigid conformation [].
Probab=22.75 E-value=9e+02 Score=29.80 Aligned_cols=140 Identities=13% Similarity=0.126 Sum_probs=75.4
Q ss_pred cCchHHHHHHHHHHHHHHHHhhhc------cchhhhhccchhhHhHHHHHHHHHhhhHHHHhhhhhc-------cHHHHH
Q 037655 577 QRSHPLALLANELRSIAERELTVF------WPAICHWCSEALTISAIMLHHFYREILKPFLQGVTSL-------SEDARL 643 (1125)
Q Consensus 577 e~~~vL~~Lak~i~~La~ke~~~f------SPiL~rwhP~a~~Vaa~~Lh~~yg~~Lk~fl~~v~~l-------t~d~~~ 643 (1125)
....+|..+.+++..+-..-.+.+ .|-+.+..|..+|..... .-....++..+..+..+ +++..+
T Consensus 354 ~~~~ll~~~~~ei~~~~~~f~~~~~~~~~~~~~~~~~~Ppvag~i~w~--r~L~~ri~~~~~~~~~~~g~~~~~~~~~~~ 431 (579)
T PF08385_consen 354 KYEQLLQQFKEEIDQLKKIFDNQKEKSETDNPPLPRNLPPVAGAIIWA--RQLERRIKEPMQRLKSLLGPDWLDSPEGKE 431 (579)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccccccccCCcHHHHHHHHH--HHHHHHHhHHHHHHHHhccchhhcchhHHH
Confidence 455677788888888866555544 244445666655544433 22333344444443332 233444
Q ss_pred HhhhhhcCCCCcccccccHHHHHHHHHHHHHHHHHHHHhhhc-cCCcccCCCCccCcccHHHHHHHHHHHHHHHHcCCCC
Q 037655 644 VLSAANKMFLFGQIGEVCRPIILDWLIAQHAHILEWTGRAFD-LEDWEPLSFQQRQGASIIEVFRIIEETVDQFFGMNLP 722 (1125)
Q Consensus 644 VL~aAd~LE~Pf~iE~~~~~~V~~Wi~~~~~ki~ewV~rAiq-~E~W~P~s~~e~hSsSVVDIFrm~~Etvd~ffqL~wp 722 (1125)
+.+..+.|. =.++.+.......|+++........+.+.+= ...=....=...|.+.++.+++=++.-.-. ++++|
T Consensus 432 ~~~~~~~l~--~~l~~~e~~~~~~W~~~i~~~~~~~L~~~ll~~~~~~~~~l~VNfd~~l~~l~rEvr~l~~l--g~~iP 507 (579)
T PF08385_consen 432 LKQKYNELL--KKLDEYEKEIFEEWLNEIESNINSSLSQPLLKRRSDENGRLVVNFDPELLTLLREVRYLQSL--GFEIP 507 (579)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhccccceeeeccCCCceEEEeCCHHHHHHHHHHHHHHHc--CCCCC
Confidence 444444432 1355556677889999888888666665554 111111111256888777777665543332 44444
No 25
>KOG2025 consensus Chromosome condensation complex Condensin, subunit G [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]
Probab=22.36 E-value=1.9e+03 Score=29.00 Aligned_cols=256 Identities=17% Similarity=0.140 Sum_probs=138.5
Q ss_pred HHHHHHhhhcccCcccchHHHHHHHHHH---HhhCCCCCCChhhHHHHHHHHHHHhhcccC-chhhHHHHHHHhhccCCC
Q 037655 380 YEKLLFGMFDVLDECQLIEEADAIMSLI---KLTWPTLGITQKMHYGIFAWVLFQQFVGTG-EGMLLEYAVLELQKVSPT 455 (1125)
Q Consensus 380 Y~~LL~~~FD~~de~~l~eE~dElLeli---k~tW~iLgit~~~Hnvcf~wVlF~qyV~tg-e~dlL~aA~~~l~ev~~d 455 (1125)
|.+|+.-+|-.+++..+.+|.+-+++-+ ||+=+++ . |-+=|+=-++.-+-... +.|++...+.+|-.-.-.
T Consensus 22 ~~kl~~k~~em~t~~~F~eeflr~vn~il~vkKresi~--d---RIl~fla~fv~sl~q~d~e~DlV~~~f~hlLRg~Es 96 (892)
T KOG2025|consen 22 YSKLLAKVMEMLTAHEFSEEFLRVVNYILLVKKRESIP--D---RILSFLARFVESLPQLDKEEDLVAGTFYHLLRGTES 96 (892)
T ss_pred HHHHHHHHHHhhhHhhhHHHHHHHHHHheeeccCCCcH--H---HHHHHHHHHHHhhhccCchhhHHHHHHHHHHhcccC
Confidence 9999999999999999999999999933 7766554 3 55666655555554445 788999999887654332
Q ss_pred cccCcccccchhhhhhhcccC-CccccHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCc-chhhHHHHHHHHhhhcCCCch
Q 037655 456 EEDDGKEVQYINNIICSRKLN-DRKDNLSLLQAIFVSISIWCDSKLQDYHRHFSQEPS-NFKRVMALASTVGVFTPGDCA 533 (1125)
Q Consensus 456 ~~~~~~~~~y~~~l~~~~~~~-~t~~d~~ll~s~LssI~~w~~krL~dyH~~f~~~~~-~me~i~~v~~~~~~il~eD~~ 533 (1125)
++++ -+.-+-.++..+-++ .-++ ..+.+.|.+.+..|| |++.|. +++.+..+..+ ++|+.
T Consensus 97 kdk~--VRfrvlqila~l~d~~~eid-----d~vfn~l~e~l~~Rl------~Drep~VRiqAv~aLsrl-----Q~d~~ 158 (892)
T KOG2025|consen 97 KDKK--VRFRVLQILALLSDENAEID-----DDVFNKLNEKLLIRL------KDREPNVRIQAVLALSRL-----QGDPK 158 (892)
T ss_pred cchh--HHHHHHHHHHHHhccccccC-----HHHHHHHHHHHHHHH------hccCchHHHHHHHHHHHH-----hcCCC
Confidence 3222 222222222222222 2222 246677888888999 555554 37766665533 33332
Q ss_pred hhhhhccCccchHHHHHHHHHHHHHHHHHHHHHhhcccccccccCchHHHHHHHHHHHHHHHHhhhccchhhhhccchhh
Q 037655 534 EIKLTKLHTSNDNAARKVKGYVEKSIETACRQVASTIDLESKVQRSHPLALLANELRSIAERELTVFWPAICHWCSEALT 613 (1125)
Q Consensus 534 ~~~~~~~~~~~~~~~~~vd~yIrsS~~~af~~~le~~~~~~~~e~~~vL~~Lak~i~~La~ke~~~fSPiL~rwhP~a~~ 613 (1125)
... .+.++.+...|++==..-++.| +|.... ......+-++.=|+|+..-..|- +|+.+|.+.|
T Consensus 159 dee----~~v~n~l~~liqnDpS~EVRRa---aLsnI~--vdnsTlp~IveRarDV~~anRrl--vY~r~lpkid----- 222 (892)
T KOG2025|consen 159 DEE----CPVVNLLKDLIQNDPSDEVRRA---ALSNIS--VDNSTLPCIVERARDVSGANRRL--VYERCLPKID----- 222 (892)
T ss_pred CCc----ccHHHHHHHHHhcCCcHHHHHH---HHHhhc--cCcccchhHHHHhhhhhHHHHHH--HHHHhhhhhh-----
Confidence 111 0111112222211111111111 121111 12233355566677776543333 5555554443
Q ss_pred HhHHHHHHHHHhhhHHHHhhhhhccHHHHHHhhhhhcCC-CCcccccccHHHHH-HHHHHHHHHHHHHHHhhhccCCccc
Q 037655 614 ISAIMLHHFYREILKPFLQGVTSLSEDARLVLSAANKMF-LFGQIGEVCRPIIL-DWLIAQHAHILEWTGRAFDLEDWEP 691 (1125)
Q Consensus 614 Vaa~~Lh~~yg~~Lk~fl~~v~~lt~d~~~VL~aAd~LE-~Pf~iE~~~~~~V~-~Wi~~~~~ki~ewV~rAiq~E~W~P 691 (1125)
...++=+ .+|+=--.+|+ .-+.+++.....+- .|++....++.||++|-
T Consensus 223 --------------------~r~lsi~-krv~LlewgLnDRe~sVk~A~~d~il~~Wl~~~dgni~ElL~~l-------- 273 (892)
T KOG2025|consen 223 --------------------LRSLSID-KRVLLLEWGLNDREFSVKGALVDAILSGWLRFSDGNILELLERL-------- 273 (892)
T ss_pred --------------------hhhhhHH-HHHHHHHHhhhhhhhHHHHHHHHHHHHHHhhhccccHHHHHHHh--------
Confidence 2222211 22222223443 55667776666654 59999999999999985
Q ss_pred CCCCccCcccHHHH
Q 037655 692 LSFQQRQGASIIEV 705 (1125)
Q Consensus 692 ~s~~e~hSsSVVDI 705 (1125)
+-+++|.++|-.
T Consensus 274 --dvsnss~vavk~ 285 (892)
T KOG2025|consen 274 --DVSNSSEVAVKA 285 (892)
T ss_pred --ccccchHHHHHH
Confidence 335555666643
No 26
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=21.78 E-value=32 Score=39.44 Aligned_cols=38 Identities=16% Similarity=0.350 Sum_probs=35.8
Q ss_pred HHHhhhcCCceehhHHHhhhhccCCCCccccCCCCCeE
Q 037655 55 IIHCVKSGGVVDVSEASKKYLDESTYPTMVHSQIGDSY 92 (1125)
Q Consensus 55 ~l~c~~~g~~~~~~~a~~~~~~~~~~p~~~~~~~~~~~ 92 (1125)
-+||+-.+-+++|.||++++.+|...|+.+-+|++.+|
T Consensus 57 ~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksF 94 (290)
T KOG1680|consen 57 ALNALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSF 94 (290)
T ss_pred HhccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCcc
Confidence 57899999999999999999999999999999999887
No 27
>PF03139 AnfG_VnfG: Vanadium/alternative nitrogenase delta subunit; InterPro: IPR004349 The nitrogenase complex 1.18.6.1 from EC catalyses the conversion of molecular nitrogen to ammonia (nitrogen fixation). The complex is hexameric, consisting of 2 alpha, 2 beta, and 2 delta subunits. This family represents the delta subunit of a group of nitrogenases that do not utilise molybdenum (Mo) as a cofactor, but instead use either vanadium (V nitrogenases), or iron (alternative nitrogenases). ; GO: 0016163 nitrogenase activity, 0009399 nitrogen fixation, 0055114 oxidation-reduction process
Probab=21.67 E-value=1.1e+02 Score=30.78 Aligned_cols=63 Identities=21% Similarity=0.230 Sum_probs=39.3
Q ss_pred HHHHHHHhhCCCCCCCCCCCccccccCCCCCHHHHHHHHHhhhcccCc---ccchHHHHHHHHHHHhhCCCCCCC
Q 037655 346 IRQVALKLSSLPGQFGIQSETYYWTAAYHLNIRLYEKLLFGMFDVLDE---CQLIEEADAIMSLIKLTWPTLGIT 417 (1125)
Q Consensus 346 l~~~~~~La~r~~~~~~~~e~chWadgyPlN~rlY~~LL~~~FD~~de---~~l~eE~dElLelik~tW~iLgit 417 (1125)
|...+-=|++-+...+++.|.|||+|.-+ |...|--+=+ +.=-+|+.+||+.+|.+=--+-||
T Consensus 35 L~kt~qlL~gE~v~~eTp~Drcyw~DAv~---------la~~~k~rfpW~~~~~k~ei~~lm~~lk~rld~ltIt 100 (112)
T PF03139_consen 35 LNKTTQLLCGEPVDLETPADRCYWVDAVC---------LAEAFKERFPWINEMSKDEIKSLMQGLKERLDYLTIT 100 (112)
T ss_pred HHHHHHHHcCCCCCCCCchhHHHHHHHHH---------HHHHHHHcCcHHHHCCHHHHHHHHHHHHHHHhHhhhc
Confidence 44444556777777778999999998633 2222211111 244589999999998764444444
No 28
>PRK05094 dsDNA-mimic protein; Reviewed
Probab=21.45 E-value=67 Score=31.99 Aligned_cols=21 Identities=33% Similarity=0.594 Sum_probs=18.2
Q ss_pred CCCChHHHHHHHHHHHHHhhh
Q 037655 173 TGLSDDDLRETAYELFLASLL 193 (1125)
Q Consensus 173 t~ls~ddlRetAYEi~~a~~~ 193 (1125)
.-+|.|++-|+||+||+--+.
T Consensus 5 ~~~s~De~id~AYDiFLE~A~ 25 (107)
T PRK05094 5 NRLTEDETLEQAYDIFLELAA 25 (107)
T ss_pred ccCCHHHHHHHHHHHHHHhhh
Confidence 468999999999999997665
No 29
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []. COG7 is required for normal Golgi morphology and trafficking. Mutation in COG7 causes a congenital disorder of glycosylation [].
Probab=20.96 E-value=7.4e+02 Score=32.60 Aligned_cols=83 Identities=23% Similarity=0.253 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCcccCCCCccCcccHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHH
Q 037655 663 PIILDWLIAQHAHILEWTGRAFDLEDWEPLSFQQRQGASIIEVFRIIEETVDQFFGMNLPLDIIHLQALLSIIFHSLDAY 742 (1125)
Q Consensus 663 ~~V~~Wi~~~~~ki~ewV~rAiq~E~W~P~s~~e~hSsSVVDIFrm~~Etvd~ffqL~wp~~a~lL~aLs~Gid~~lq~Y 742 (1125)
+|..+.-.--...+..-+ +++..+.++..+--+.-+.|+..+|.++++.++-...|-=+--. ..|..+|+..|.+|
T Consensus 358 ~~q~~Yg~lE~~~L~~~L-~~l~~~~~~~~d~v~~L~~s~~k~f~lae~Av~RC~~fT~G~~~---~~Ll~Ald~~~~~y 433 (766)
T PF10191_consen 358 PYQQRYGELERRFLSAQL-SALDLESAELSDAVRRLEESIPKLFGLAEEAVDRCIAFTGGYGV---PGLLKALDSIFSQY 433 (766)
T ss_pred HHHHHHHHHHHHHHHHHH-HhcccCCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCccH---HHHHHHHHHHHHHH
Confidence 333333333333333333 24444555443333456779999999999999999988643222 46677788889999
Q ss_pred HHHHHHh
Q 037655 743 LQRLLNQ 749 (1125)
Q Consensus 743 ~~~v~~~ 749 (1125)
++.....
T Consensus 434 ~~~~~~~ 440 (766)
T PF10191_consen 434 LSSLTAT 440 (766)
T ss_pred HHHHHHH
Confidence 8875443
Done!