Query 037655
Match_columns 1125
No_of_seqs 163 out of 178
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 04:32:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037655.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037655hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swh_A MUNC13-1, protein UNC-1 100.0 4E-44 1.4E-48 403.0 21.4 294 656-1018 6-337 (341)
2 2fji_1 Exocyst complex compone 98.9 3E-08 1E-12 113.9 20.3 334 659-1054 7-355 (399)
3 3hr0_A COG4; conserved oligome 95.4 0.1 3.5E-06 57.1 12.4 171 867-1055 78-255 (263)
4 2a2f_X Exocyst complex compone 94.8 0.28 9.5E-06 55.2 14.2 100 905-1006 217-317 (325)
5 3fhn_A Protein transport prote 62.9 62 0.0021 40.0 13.8 95 906-1008 562-657 (706)
6 2jdj_A HAPK, REDY-like protein 34.4 10 0.00036 36.1 0.6 36 68-104 16-51 (105)
7 1m9i_A Annexin VI; calcium-bin 31.0 1.3E+02 0.0046 36.9 9.7 306 340-686 123-449 (672)
8 2z84_A UFSP1, UFM1-specific pr 22.6 60 0.0021 34.6 4.0 40 64-103 122-176 (218)
9 1nnv_A Hypothetical protein HI 20.8 46 0.0016 31.8 2.3 20 174-193 10-29 (110)
10 3fx7_A Putative uncharacterize 20.1 65 0.0022 30.2 3.1 25 284-308 67-91 (94)
No 1
>3swh_A MUNC13-1, protein UNC-13 homolog A; alpha helical, neurotransmitter release, snare motif, exocyt; 2.65A {Rattus norvegicus}
Probab=100.00 E-value=4e-44 Score=403.00 Aligned_cols=294 Identities=15% Similarity=0.260 Sum_probs=227.1
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHhhhccCCcccCC---CCccCcccHHHHHHHHHHHHHHHHcCCCC---ccHHHHH
Q 037655 656 QIGEVCRPIILDWLIAQHAHILEWTGRAFDLEDWEPLS---FQQRQGASIIEVFRIIEETVDQFFGMNLP---LDIIHLQ 729 (1125)
Q Consensus 656 ~iE~~~~~~V~~Wi~~~~~ki~ewV~rAiq~E~W~P~s---~~e~hSsSVVDIFrm~~Etvd~ffqL~wp---~~a~lL~ 729 (1125)
+.+.+|.|+|++|+++..+++.+||++|++.|+|+|.+ ++.+||+||||+|+||+|+++.|.+|+|| ..+.|++
T Consensus 6 ~~~~wF~~~V~~Wl~~~~~k~~~~v~~Ai~~Dk~~~~~~~~~~~~hSsSvvDif~~~~Q~~~~~~~L~WpD~~~~~~f~t 85 (341)
T 3swh_A 6 EYPAWFEPFVIQWLDENEEVSRDFLHGALERDKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKLECPDPQIVGHYMR 85 (341)
T ss_dssp ---CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSSSCCSCTHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccCccccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 45789999999999999999999999999999999986 67899999999999999999999999999 4568999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCchhhhhhhhHHHhhcccccccccccccccccccccceeeeeccHHH
Q 037655 730 ALLSIIFHSLDAYLQRLLNQLVEQKHLYPSAPPLTRYEETVLPMLKKKLLEFTVLDKSVSEKLNELTIPKLCIRLNTLQY 809 (1125)
Q Consensus 730 aLs~Gid~~lq~Y~~~v~~~cgske~liP~~P~LTR~~~e~~~f~Kkkv~~~~~P~~~~~~~~~~~~~~~LCVrLNNLey 809 (1125)
.|++.|.+++..||+.+...+. ++ |.. .+...+||.+||+||
T Consensus 86 ~l~~~i~~~~~~Y~~~l~~~~~---~~---------~~~--------------------------e~~~~~Cv~lNNie~ 127 (341)
T 3swh_A 86 RFAKTISNVLLQYADIVSKDFA---SY---------CSK--------------------------EKEKVPCILMNNTQQ 127 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---HH---------CCT--------------------------TSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---hh---------hhh--------------------------hcccchhhhcccHHH
Confidence 9999999999999999987762 11 110 013459999999999
Q ss_pred HHHHHHHHHHHHHhhhcccCCccccccccccchhhhhhhcccCchhhhhHHHhHHHHHHHHHHHHHHHHHhhhhceeeee
Q 037655 810 IQKQVSVLEEGIRKSWALVGPAVDQASAEGETEESLERNFLTSSEAVDELFITTLNIIRDTATGAIRKICDFIGARVVFW 889 (1125)
Q Consensus 810 i~~qLd~LEk~I~~~w~~~~~~~~l~~a~~~t~~s~~~~l~~~~~~~~~~~~~~F~~ar~a~~~aI~~l~e~ia~rlVF~ 889 (1125)
+|.+|++|.+.+ .|... ....+...+..+..++..+++++...|.++. .
T Consensus 128 lR~~L~~l~~~l--~~~~l----------------------------~~~~~~~~~~lq~~l~~vl~~l~~~~~~~~~-~ 176 (341)
T 3swh_A 128 LRVQLEKMFEAM--GGKEL----------------------------DAEASGTLKELQVKLNNVLDELSHVFATSFQ-P 176 (341)
T ss_dssp HHHHHHHHHHHT--TTTTS----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH-H
T ss_pred HHHHHHHHHHhc--chhhH----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 999999999977 33211 1234457777888899999998887777765 4
Q ss_pred ccchhhh---hhccc--c--cc-----------hhhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 037655 890 DLRDSFL---CCLYR--G--SV-----------ESARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYVWVL 951 (1125)
Q Consensus 890 Dlr~~~~---d~LYv--g--~V-----------s~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VL 951 (1125)
++++..- ..|+. | .+ .+++|+|||+|||++|..+++++++++++||++++|++++++++.++
T Consensus 177 ~i~~~v~~m~~~l~~i~~~~~~~~~~~~~~~~~~~~ai~PLm~yLd~~L~~l~~~L~~~~f~rvL~~lW~~~l~~l~~~i 256 (341)
T 3swh_A 177 HIEECVRQMGDILSQVKGTGNVPASACSSVAQDADNVLQPIMDLLDSNLTLFAKICEKTVLKRVLKELWKLVMNTMERTI 256 (341)
T ss_dssp HHHHHHHHHHHHHHTCC-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhcccccCCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444211 11121 1 11 26789999999999999999999999999999999999999999988
Q ss_pred ------------hcCCCCCCCChhHHHHHHHHHHHHHHhhhcCCCCCcHHHHHH--HHHHHHHHHhhhcccHHHHHHHHH
Q 037655 952 ------------LDGGPSRAFSNSDITMMEDDLNTLKEFFIAGGEGLPRSLVER--EAKYAEEILGLFTLQSETLIRMLM 1017 (1125)
Q Consensus 952 ------------L~GGpsR~Fs~~D~~~lEeDL~~Lk~fF~A~GEGLp~elVe~--~~~~v~~vL~L~~~~Te~LIe~f~ 1017 (1125)
++||++|.|+++++++++++|+.|++||||+|+|||.+.+|+ +++.++++|.||+++|++||++|.
T Consensus 257 ~lP~~~~~~~~~~~~~~~r~~~~~~~~~l~~~L~~L~~fFhA~G~GL~~~~Leks~~~~~l~~~L~L~~~~T~~LI~~f~ 336 (341)
T 3swh_A 257 VLPPEFSKLKDHMVREEAKSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQATDLLIKTFV 336 (341)
T ss_dssp TSCGGGCSSSCC----------CTTHHHHHHHHHHHHHHHHGGGTSCCHHHHHTCHHHHHHHHHHHHC------------
T ss_pred cccchhhhhHhhhcccccCCCCHHHHHHHHHHHHHHHHHhccCCCCCCHHHHccChhHHHHHHHHHHhcCCHHHHHHHHH
Confidence 689999999999999999999999999999999999999986 599999999999999999999996
Q ss_pred H
Q 037655 1018 S 1018 (1125)
Q Consensus 1018 ~ 1018 (1125)
.
T Consensus 337 ~ 337 (341)
T 3swh_A 337 Q 337 (341)
T ss_dssp -
T ss_pred h
Confidence 4
No 2
>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.93 E-value=3e-08 Score=113.90 Aligned_cols=334 Identities=13% Similarity=0.161 Sum_probs=211.6
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHhhhccC--Ccc-----cCCC--CccCcccHHHHHHHHHHHHHHHHcCCCC-ccHHHH
Q 037655 659 EVCRPIILDWLIAQHAHILEWTGRAFDLE--DWE-----PLSF--QQRQGASIIEVFRIIEETVDQFFGMNLP-LDIIHL 728 (1125)
Q Consensus 659 ~~~~~~V~~Wi~~~~~ki~ewV~rAiq~E--~W~-----P~s~--~e~hSsSVVDIFrm~~Etvd~ffqL~wp-~~a~lL 728 (1125)
+....++..|++....++.+|++|++++| .|. |..+ ...|++.++|||+|++|.++.-....=. .-..++
T Consensus 7 ~~~~~L~~~Y~~~i~~~~~eW~~nil~~E~~~w~~r~~~P~~d~~g~~~t~~~~dvfqml~eql~~a~~~~~~~l~~~v~ 86 (399)
T 2fji_1 7 KEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTPPHSDSDGLLFLDGTKTCFQMFTQQVEVAAGTNQAKILVGVV 86 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCEECTTSCEECHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCeeCCchHHHHHHHHHHHHHHHhCCCcccHHHHH
Confidence 45677899999999999999999999999 777 2222 2458999999999999999998876522 222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCchhhhhhhhHHHhhcccccccccccccccccccccceeeeeccHH
Q 037655 729 QALLSIIFHSLDAYLQRLLNQLVEQKHLYPSAPPLTRYEETVLPMLKKKLLEFTVLDKSVSEKLNELTIPKLCIRLNTLQ 808 (1125)
Q Consensus 729 ~aLs~Gid~~lq~Y~~~v~~~cgske~liP~~P~LTR~~~e~~~f~Kkkv~~~~~P~~~~~~~~~~~~~~~LCVrLNNLe 808 (1125)
......+..-...|...+.+.+ .+ ++ .+++ .+++. .++.+|++... ....+.+|.-+||-.
T Consensus 87 ~~~~~~L~~f~~~~~~~l~~~~-~~--~~-------~~~~---~~~~~--~~~~~~~~~~~----~~~~e~liA~~Nn~~ 147 (399)
T 2fji_1 87 ERFSDLLTKRQKNWISKISEEI-KK--QI-------NYNH---KYDID--PESITPEDECP----GGLVEYLIAVSNDQM 147 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HH--HH-------HHHH---TTTTG--GGSCCTTTCCC----SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HH--Hh-------cccc---ccccc--ccccCcccccc----ccHHHhhhhhhccHH
Confidence 3333333322333333332211 00 00 0000 00111 00000111000 111566888889999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCccccccccccchhhhhhhcccCchhhhhHHHhHHHHHHHHHHHHHHHHHhhhhceeee
Q 037655 809 YIQKQVSVLEEGIRKSWALVGPAVDQASAEGETEESLERNFLTSSEAVDELFITTLNIIRDTATGAIRKICDFIGARVVF 888 (1125)
Q Consensus 809 yi~~qLd~LEk~I~~~w~~~~~~~~l~~a~~~t~~s~~~~l~~~~~~~~~~~~~~F~~ar~a~~~aI~~l~e~ia~rlVF 888 (1125)
.....+..|.+.+...+... .... ....+...-++-..-++.++++|++ .||
T Consensus 148 ~~~e~~~~l~~~~~~~~~~~----------------~~~~-------~~~~l~~~~~~f~~l~~~~~~~L~~-----~if 199 (399)
T 2fji_1 148 KAADYAVAISSKYGKLVSKV----------------YEKQ-------ITNHLEGTLDGFAEVAQCSSLGLIT-----LMF 199 (399)
T ss_dssp HHHHHHHHHHHHHHTTSCHH----------------HHHH-------HHHHHHTTHHHHHHHHHHHHHHHHH-----HHH
T ss_pred HHHHHHHHHHHHHHHhccHH----------------HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHH-----HHH
Confidence 88888888888664322100 0000 0112223222334455667777776 577
Q ss_pred eccchhhhhhccccc-chhhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCChhHHH
Q 037655 889 WDLRDSFLCCLYRGS-VESARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYVWVLLDGGPS-RAFSNSDIT 966 (1125)
Q Consensus 889 ~Dlr~~~~d~LYvg~-Vs~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VLL~GGps-R~Fs~~D~~ 966 (1125)
.|++..| ..||... ..+.-++.++..++..+.-+...+++.....++.++...++-.++..|+. +.. |.....-.+
T Consensus 200 ~dl~p~~-~~lft~~W~~~~~v~~i~~ti~dy~~d~~~~L~~~~~~~l~~~~~~~~v~~Yl~~l~~-~~~~~~~~~~~~~ 277 (399)
T 2fji_1 200 DDLRKPY-QEIFSKTWYMGSQAQQIADTLDEYLLDIKPQMNSVLFVNFIDNVIGETIIKFLTALSF-EHSFKNKNNKFLE 277 (399)
T ss_dssp HTTHHHH-TTTTSGGGTTCCHHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHGGGG-CCCCCCGGGHHHH
T ss_pred HHHHHHH-HHhCCchhcCCcHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCchhHHHHH
Confidence 7888543 3333322 12237899999999999999999999999999999999999999999997 332 322378889
Q ss_pred HHHHHHHHHHHhhhcCCCCCc--HHHHHHHHHHHHHHHhhhcccH-HHHHHHHHHhhhhhhcCCCCCCCCCCCCCCccce
Q 037655 967 MMEDDLNTLKEFFIAGGEGLP--RSLVEREAKYAEEILGLFTLQS-ETLIRMLMSASENISLDLDPQNHGPMHVEDANTL 1043 (1125)
Q Consensus 967 ~lEeDL~~Lk~fF~A~GEGLp--~elVe~~~~~v~~vL~L~~~~T-e~LIe~f~~a~~~~~~g~~ppt~g~w~~~d~nTI 1043 (1125)
.|..|.+.|++||-.-|.+-. ...++.....+..+.. ..+++ +.+.+.|..... .+ |. -.++.+
T Consensus 278 ~l~~D~~~l~~~f~~~~~~~~~~~~~v~~~~~~l~~l~~-L~~d~~~~i~~~~~~l~~--~y---------pD-~~~~~V 344 (399)
T 2fji_1 278 AMKRDFEIFYQLFVKVLDGNESKDTLITQNFTVMEFFMD-LSCEPIDSILDIWQKYLE--VY---------WD-SRIDLL 344 (399)
T ss_dssp HHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHH-HHHSCGGGHHHHHHHHHT--TC---------TT-CCSHHH
T ss_pred HHHHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHH-hcCCcHHHHHHHHHHHHH--hC---------CC-CCHHHH
Confidence 999999999999987765432 2346777888888888 77888 888887765532 11 12 367889
Q ss_pred eeecccCCCch
Q 037655 1044 VRVLCHKKDRE 1054 (1125)
Q Consensus 1044 LRVLChR~D~~ 1054 (1125)
..||.-|.|=.
T Consensus 345 ~aiL~~R~D~~ 355 (399)
T 2fji_1 345 VGILKCRKDVS 355 (399)
T ss_dssp HHHHTTCTTCC
T ss_pred HHHHHhccCCC
Confidence 99999997643
No 3
>3hr0_A COG4; conserved oligomeric golgi complex, intracellular trafficking, vesicle tethering, multisubunit tethering complex, exocyst; 1.90A {Homo sapiens}
Probab=95.38 E-value=0.1 Score=57.10 Aligned_cols=171 Identities=11% Similarity=0.122 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHH-hhhhceee-----eeccchhhhhhcccc-cchhhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q 037655 867 IRDTATGAIRKIC-DFIGARVV-----FWDLRDSFLCCLYRG-SVESARLESFLTHIDTVLDHICSLIDDSLRDFVVLSI 939 (1125)
Q Consensus 867 ar~a~~~aI~~l~-e~ia~rlV-----F~Dlr~~~~d~LYvg-~Vs~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~v 939 (1125)
.+..++++|++|. .++-.|+- |.|..+.+-+.=|.. +..+.-+..+...+++.|.-+..+++..+.+.++.-+
T Consensus 78 ~~~ll~~gi~~Lf~~~ikprLr~~l~~f~~~~y~l~eee~~~~e~~d~~~~~F~~~w~~ll~p~k~~Lt~~~y~~Ll~~~ 157 (263)
T 3hr0_A 78 FRDLLQEGLTELNSTAIKPQVQPWINSFFSVSHNIEEEEFNDYEANDPWVQQFILNLEQQMAEFKASLSPVIYDSLTGLM 157 (263)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHGGGGSCBSCCHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccccCCHhHHhhhhcccHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 4567888899986 56666641 444433221111110 1223347788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHhhhcCCCCCcHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHh
Q 037655 940 CRASLEGYVWVLLDGGPSRAFSNSDITMMEDDLNTLKEFFIAGGEGLPRSLVEREAKYAEEILGLFTLQSETLIRMLMSA 1019 (1125)
Q Consensus 940 mkAs~e~fL~VLL~GGpsR~Fs~~D~~~lEeDL~~Lk~fF~A~GEGLp~elVe~~~~~v~~vL~L~~~~Te~LIe~f~~a 1019 (1125)
...+...++..++.+ .|+.==.-.+|.|++.|-.+|+.-|. ..+. ....++.+|..++.++..+=+.+|
T Consensus 158 ~~~la~~lE~~i~~~----~fn~lGal~LdrDvr~li~~~~~~~~---~~lR-ekF~RL~QI~~lLnle~~eev~d~--- 226 (263)
T 3hr0_A 158 TSLVAVELEKVVLKS----TFNRLGGLQFDKELRSLIAYLTTVTT---WTIR-DKFARLSQMATILNLERVTEILDY--- 226 (263)
T ss_dssp HHHHHHHHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHTTSC---TTHH-HHTHHHHHHHHHHTCSSGGGGGGT---
T ss_pred HHHHHHHHHHHHHhC----CcCchhHHHHHHHHHHHHHHHHhccc---hhhh-HHHHHHHHHHHHHcCCChHHHHHH---
Confidence 999999999999863 38888888999999999999987443 2233 335667788888877764311111
Q ss_pred hhhhhcCCCCCCCCCCCCCCccceeeecccCCCchh
Q 037655 1020 SENISLDLDPQNHGPMHVEDANTLVRVLCHKKDRES 1055 (1125)
Q Consensus 1020 ~~~~~~g~~ppt~g~w~~~d~nTILRVLChR~D~~A 1055 (1125)
.+. ..| ...| .-+|+-+-|||..|.|-..
T Consensus 227 ~~~-~~~-----~~~W-~Ls~~E~r~il~lRvDf~~ 255 (263)
T 3hr0_A 227 WGP-NSG-----PLTW-RLTPAEVRQVLALRIDFRS 255 (263)
T ss_dssp SGG-GGT-----TCCC-CSCHHHHHHHHTTBTTSCH
T ss_pred hcc-cCC-----Cccc-cCCHHHHHHHHHhhccCCH
Confidence 111 011 1247 5788889999999988543
No 4
>2a2f_X Exocyst complex component SEC15; all helical structure, protein transport; 2.50A {Drosophila melanogaster}
Probab=94.84 E-value=0.28 Score=55.23 Aligned_cols=100 Identities=14% Similarity=0.159 Sum_probs=75.8
Q ss_pred hhhhHHHhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHhhhcCC-
Q 037655 905 ESARLESFLTHIDTVLDHICSLIDDSLRDFVVLSICRASLEGYVWVLLDGGPSRAFSNSDITMMEDDLNTLKEFFIAGG- 983 (1125)
Q Consensus 905 s~~RIeplL~~Ld~~L~~l~s~l~d~~r~rvv~~vmkAs~e~fL~VLL~GGpsR~Fs~~D~~~lEeDL~~Lk~fF~A~G- 983 (1125)
++.-|..++.||+..... -..|...++..+....|+.+=+.++-.|++.+ -+.++..-+.-+.-|++.|.+|=-+++
T Consensus 217 ps~yi~dli~fL~~~f~s-l~~LP~~v~~~~~~~a~~his~~l~~~Ll~~~-vk~in~~av~~~~~Dv~~lE~fa~~~~v 294 (325)
T 2a2f_X 217 ASAFITDMISYLKSTFDS-FAFKLPHIAQAACRRTFEHIAEKIYSIMYDED-VKQISTGALTQINLDLMQCEFFAASEPV 294 (325)
T ss_dssp CCHHHHHHHHHHHHHHHT-TTTTSHHHHHHHHHHHHHHHHHHHHHHHTC-------CCTTHHHHHHHHHHHHHHHTTCSS
T ss_pred ccHHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHHHHHHHHhcCcc-hhhcCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 466699999999999994 66899999999999999999999999887533 366899999999999999999954432
Q ss_pred CCCcHHHHHHHHHHHHHHHhhhc
Q 037655 984 EGLPRSLVEREAKYAEEILGLFT 1006 (1125)
Q Consensus 984 EGLp~elVe~~~~~v~~vL~L~~ 1006 (1125)
.|+.+..+......+++.+.|+-
T Consensus 295 ~~l~~~~L~~~F~eLrQli~Ll~ 317 (325)
T 2a2f_X 295 PGLKEGELSKYFLRNRQLLDLLI 317 (325)
T ss_dssp SSCCSSTTGGGGHHHHHHHHHHH
T ss_pred CCcccchHHHHHHHHHHHHHHHH
Confidence 25544445566677777777653
No 5
>3fhn_A Protein transport protein TIP20; TIP20P, vesicle tethering, endoplasmic reticulum, ER-golgi transport, membrane, phosphoprotein; 3.00A {Saccharomyces cerevisiae}
Probab=62.88 E-value=62 Score=40.03 Aligned_cols=95 Identities=13% Similarity=0.178 Sum_probs=62.6
Q ss_pred hhhHHHhHHHHHHHHHHHHhh-hhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHhhhcCCC
Q 037655 906 SARLESFLTHIDTVLDHICSL-IDDSLRDFVVLSICRASLEGYVWVLLDGGPSRAFSNSDITMMEDDLNTLKEFFIAGGE 984 (1125)
Q Consensus 906 ~~RIeplL~~Ld~~L~~l~s~-l~d~~r~rvv~~vmkAs~e~fL~VLL~GGpsR~Fs~~D~~~lEeDL~~Lk~fF~A~GE 984 (1125)
++.+-|.|..|...|..|... +......++-+.+...+-+-+..-+|- ...|+..-..-+..|++.|...|- -++
T Consensus 562 SaEL~~~L~~L~~~L~~L~~~lL~~~~f~~IwR~ia~~Ld~yL~e~IL~---~nkFS~~Ga~Qf~~D~~~L~~v~~-lp~ 637 (706)
T 3fhn_A 562 SAELVNSINVLRRLINKLDSMDIPLAISLKVKNELLNVIVNYFTESILK---LNKFNQNGLNQFLHDFKSLSSILS-LPS 637 (706)
T ss_dssp CGGGHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHTTTT---TSCBCHHHHHHHHHHHHHHHTTSC-CCT
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHh---cCccCHHHHHHHHHHHHHHHHHhc-CCC
Confidence 556899999999999988887 565555554444433333222222222 358999999999999999998887 444
Q ss_pred CCcHHHHHHHHHHHHHHHhhhccc
Q 037655 985 GLPRSLVEREAKYAEEILGLFTLQ 1008 (1125)
Q Consensus 985 GLp~elVe~~~~~v~~vL~L~~~~ 1008 (1125)
|- .+.....+.+.+.|..++
T Consensus 638 ~~----~~~~~~~L~E~l~LL~L~ 657 (706)
T 3fhn_A 638 HA----TNYKCMSLHELVKILKLK 657 (706)
T ss_dssp TC----CCHHHHHHHHHHHHHGGG
T ss_pred cc----hhhHHHHHHHHHHHcCCC
Confidence 43 444555556555555443
No 6
>2jdj_A HAPK, REDY-like protein; prodigiosin, biosynthesis, biosynthetic protein; 2.00A {Hahella chejuensis}
Probab=34.39 E-value=10 Score=36.08 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=31.3
Q ss_pred hHHHhhhhccCCCCccccCCCCCeEEEecCCCCCCCC
Q 037655 68 SEASKKYLDESTYPTMVHSQIGDSYFLSSDPDLSGSP 104 (1125)
Q Consensus 68 ~~a~~~~~~~~~~p~~~~~~~~~~~~l~~~p~~~~~~ 104 (1125)
-+|..+|..+.+||....-++. .+|-|+++...|.|
T Consensus 16 ~~aFe~w~~evD~P~~~~LpsV-rsF~V~R~~~~g~~ 51 (105)
T 2jdj_A 16 ADAFEFWVQNVDYATCPDLPSV-VRFDVHRASLQANA 51 (105)
T ss_dssp HHHHHHHHHHTHHHHGGGCTTE-EEEEEEECCCCTTC
T ss_pred HHHHHHHHHhchhhhccCCCcc-eeEEEEecccCCCC
Confidence 3689999999999999999999 88999999977554
No 7
>1m9i_A Annexin VI; calcium-binding, membrane-binding, phosphorylation, mutant T356D, lipid binding protein; 2.65A {Homo sapiens} SCOP: a.65.1.1 a.65.1.1 PDB: 1avc_A
Probab=31.05 E-value=1.3e+02 Score=36.87 Aligned_cols=306 Identities=13% Similarity=0.052 Sum_probs=155.3
Q ss_pred hhHHHHHHHHHHHhhCCCCCCCCCCCccccccCCCCCH-HHHHHHHHhh---hcccCcccchHHHHHHHHHHHhhCCCCC
Q 037655 340 VEVLSSIRQVALKLSSLPGQFGIQSETYYWTAAYHLNI-RLYEKLLFGM---FDVLDECQLIEEADAIMSLIKLTWPTLG 415 (1125)
Q Consensus 340 ~e~m~~l~~~~~~La~r~~~~~~~~e~chWadgyPlN~-rlY~~LL~~~---FD~~de~~l~eE~dElLelik~tW~iLg 415 (1125)
++-|+.++++-..+=.|+..-+..+|+ .| +. ++...|+++- .+..|+.++-+++.+|-+-..++|.+
T Consensus 123 n~ei~~ik~aY~~~y~~sLe~di~~dt----sG---~f~klLv~L~~~~R~e~~~vd~~~a~~DA~~L~~Age~k~gt-- 193 (672)
T 1m9i_A 123 NEQMHQLVAAYKDAYERDLEADIIGDT----SG---HFQKMLVVLLQGTREEDDVVSEDLVQQDVQDLYEAGELKWGT-- 193 (672)
T ss_dssp HHHHHHHHHHHHHHSCSCHHHHHHHHC----CH---HHHHHHHHHHHCCCCCSCCCCHHHHHHHHHHHHHHTTTSSSC--
T ss_pred HHHHHHHHHHHHHHhCcchHHHHhccC----Cc---cHHHHHHHHHhcCCCCCCCCChHHHHHHHHHHHHhhcccCCC--
Confidence 445788888877776655322211211 12 11 2344444432 23345568888999999999999853
Q ss_pred CChhhHHHHHHHHHHHhhcccCchhhHHHHHHHhhccCCCcccCcccccchhhhhhhcccCCccccHHHHHHHHHHHHH-
Q 037655 416 ITQKMHYGIFAWVLFQQFVGTGEGMLLEYAVLELQKVSPTEEDDGKEVQYINNIICSRKLNDRKDNLSLLQAIFVSISI- 494 (1125)
Q Consensus 416 it~~~Hnvcf~wVlF~qyV~tge~dlL~aA~~~l~ev~~d~~~~~~~~~y~~~l~~~~~~~~t~~d~~ll~s~LssI~~- 494 (1125)
+...|..+|.. ..+..|.+.++.-++. |-+++...++.+.+-+--..|..++..+..
T Consensus 194 -----de~~fi~Il~~-----RS~~~L~~v~~~Y~~~------------~g~~i~~aI~~e~sG~~~~aL~~iv~c~~~~ 251 (672)
T 1m9i_A 194 -----DEAQFIYILGN-----RSKQHLRLVFDEYLKT------------TGKPIEASIRGELSGDFEKLMLAVVKCIRST 251 (672)
T ss_dssp -----CHHHHHHHHHH-----SCHHHHHHHHHHHHHH------------SSSCHHHHHTTTSCHHHHHHHHHHHHHHHHH
T ss_pred -----cHHHHHHHHHh-----CCHHHHHHHHHHHHHH------------hCccHHHHHHHhcCchHHHHHHHHHHHHCCh
Confidence 34455555533 2444555555443332 223333334444322222344444333322
Q ss_pred --HHHHHHhHHhhhcCCCCcchhhHHHHHHHHhhhcCCCchhhhhhccCccchHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 037655 495 --WCDSKLQDYHRHFSQEPSNFKRVMALASTVGVFTPGDCAEIKLTKLHTSNDNAARKVKGYVEKSIETACRQVASTIDL 572 (1125)
Q Consensus 495 --w~~krL~dyH~~f~~~~~~me~i~~v~~~~~~il~eD~~~~~~~~~~~~~~~~~~~vd~yIrsS~~~af~~~le~~~~ 572 (1125)
-.-++|++-+.-.+.+ -..+..+++.=+.+--.+.-.++. ..++..+...|++-.+--|+++|-....
T Consensus 252 ~~yfA~~L~~amkG~GTd---d~~LiRiiVsR~e~Dl~~Ik~~y~-------~~yg~sL~~~I~~dtsGdY~~~LlaL~~ 321 (672)
T 1m9i_A 252 PEYFAERLFKAMKGLGTR---DNTLIRIMVSRSELDMLDIREIFR-------TKYEKSLYSMIKNDTSGEYKKTLLKLSG 321 (672)
T ss_dssp HHHHHHHHHHTSSSSSCC---HHHHHHHHHHTTTTTHHHHHHHHH-------HHSSSCHHHHHHTTCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccCCCC---hhhhhhHhhccCHHHHHHHHHHHH-------HHhCCcHHHHHHHhcCCcHHHHHHHHhC
Confidence 3333443333323222 234555554322221111112222 2355567777887777788887655322
Q ss_pred ccc---ccCchHHHHHHHHHHHHHHHHhhhccchhhhhccchhhHhHHHHHHHH---HhhhHHHHhhhhhccHHHHHHhh
Q 037655 573 ESK---VQRSHPLALLANELRSIAERELTVFWPAICHWCSEALTISAIMLHHFY---REILKPFLQGVTSLSEDARLVLS 646 (1125)
Q Consensus 573 ~~~---~e~~~vL~~Lak~i~~La~ke~~~fSPiL~rwhP~a~~Vaa~~Lh~~y---g~~Lk~fl~~v~~lt~d~~~VL~ 646 (1125)
... .+|.+.+++++--.-.....-...+.|-+....+.-+...|-.|+.++ |++=+..++=..+.|+.-.+-+.
T Consensus 322 ~~~~~~g~~~~~~a~~~~~~~~~~~~~~~~~~~ti~~~~~f~~~~Da~~L~kA~kG~GtDE~~iI~IL~~rs~~QR~~I~ 401 (672)
T 1m9i_A 322 GDDDAAGQFFPEAAQVAYQMWELSAVARVELKGDVRPANDFNPDADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIR 401 (672)
T ss_dssp SCTTSSCCCCHHHHHHHHHHHHHHHHCCCCCCCSCCCCTTCCHHHHHHHHHHHHSSSSCCHHHHHHHHHTSCHHHHHHHH
T ss_pred CccccccccCCccccccccccccccccccCCCCCcCCCCCCChHHHHHHHHHHhcCCCCCHHHHHHHHhcCCHHHHHHHH
Confidence 111 256666565553333321111122333332221122344555666664 66666666666666665444444
Q ss_pred hhh-cC---C----CCcccccccHHHHHHHHHHHHHHHHHHHHhhhcc
Q 037655 647 AAN-KM---F----LFGQIGEVCRPIILDWLIAQHAHILEWTGRAFDL 686 (1125)
Q Consensus 647 aAd-~L---E----~Pf~iE~~~~~~V~~Wi~~~~~ki~ewV~rAiq~ 686 (1125)
.+= .+ + .--++.+-|..+|..|+......-..++..|++.
T Consensus 402 ~~Y~~~~gkdL~~~LkselsG~fe~~i~~l~~~p~~~DA~~l~~A~kg 449 (672)
T 1m9i_A 402 QTFKSHFGRDLMTDLKSEISGDLARLILGLMMPPAHYDAKQLKKAMEG 449 (672)
T ss_dssp HHHHHHHSSCHHHHHHHHCCTHHHHHHHHHHSCHHHHHHHHHHHHHSS
T ss_pred HHHHHHhCchHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHHHHHHhc
Confidence 432 11 0 2224557789999999999999999999999975
No 8
>2z84_A UFSP1, UFM1-specific protease 1; alpha/beta, papain like fold, hydrolase, thiol protease, UBL conjugation pathway; 1.70A {Mus musculus}
Probab=22.64 E-value=60 Score=34.58 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=34.3
Q ss_pred ceehhHHHhhhhccCCCCcccc---------------CCCCCeEEEecCCCCCCC
Q 037655 64 VVDVSEASKKYLDESTYPTMVH---------------SQIGDSYFLSSDPDLSGS 103 (1125)
Q Consensus 64 ~~~~~~a~~~~~~~~~~p~~~~---------------~~~~~~~~l~~~p~~~~~ 103 (1125)
.-.+-+.+.+||....-|+|+. ..+|+.+|||-||-..|.
T Consensus 122 ~~~~~~~l~~hF~~~g~PI~igG~~~ghS~tIvGve~~~~g~~~lLIlDPhy~~~ 176 (218)
T 2z84_A 122 LRGEEERLYSHFTTGGGPVMVGGDADAQSKALLGICEGPGSEVYVLILDPHYWGT 176 (218)
T ss_dssp TTTCHHHHHHHHHTTCCCEEECCTTTSCCEEEEEEEECTTCCEEEEEECCCCCSC
T ss_pred HHHHHHHHHHHHhcCCCCEEECCCcccccceEEeEEecCCCcEEEEEECCCcCCc
Confidence 4457788999999999999998 456888999999999884
No 9
>1nnv_A Hypothetical protein HI1450; structure 2 function project, S2F, structural genomics, unknown function; NMR {Haemophilus influenzae} SCOP: d.17.7.1
Probab=20.82 E-value=46 Score=31.80 Aligned_cols=20 Identities=30% Similarity=0.428 Sum_probs=17.8
Q ss_pred CCChHHHHHHHHHHHHHhhh
Q 037655 174 GLSDDDLRETAYELFLASLL 193 (1125)
Q Consensus 174 ~ls~ddlRetAYEi~~a~~~ 193 (1125)
-+|.|++-|+||+||+--+.
T Consensus 10 ~~t~De~id~AYDiFLE~A~ 29 (110)
T 1nnv_A 10 KLDPDTAIDIAYDIFLEMAG 29 (110)
T ss_dssp CCCHHHHHHHHHHHHHHHCS
T ss_pred cCCHHHHHHHHHHHHHHhhh
Confidence 68999999999999997655
No 10
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=20.05 E-value=65 Score=30.15 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=20.5
Q ss_pred CHHHHHHHHHHHHHHHHHhhhccCc
Q 037655 284 NEKAYIQWKNRQANILEELLSCSTN 308 (1125)
Q Consensus 284 d~~ey~~Wq~Rql~vLE~gLl~hp~ 308 (1125)
+..+|+.|.+.+++|||+..+-|-+
T Consensus 67 ~a~e~vp~L~~~i~vle~~~~~~~~ 91 (94)
T 3fx7_A 67 AAQEQIAWLKERIRVLEEDYLEHHH 91 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---
T ss_pred hhHHHhHHHHHHHHHhHHHHHHhcc
Confidence 5689999999999999999987753
Done!