BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037659
(202 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OQ4|A Chain A, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ4|B Chain B, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ4|C Chain C, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ4|D Chain D, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ4|E Chain E, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ4|F Chain F, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Azide.
pdb|1OQ7|A Chain A, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ7|B Chain B, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ7|C Chain C, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ7|D Chain D, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ7|E Chain E, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ7|F Chain F, The Crystal Structure Of The Iron Free (apo-)form Of
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (castor Bean).
pdb|1OQ9|A Chain A, The Crystal Structure Of The Complex Between Stearoyl Acyl
Carrier Protein Desaturase From Ricinus Communis (Castor
Bean) And Acetate.
pdb|1OQB|A Chain A, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|1OQB|B Chain B, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|1OQB|C Chain C, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|1OQB|D Chain D, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|1OQB|E Chain E, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|1OQB|F Chain F, The Crystal Structure Of The One-iron Form Of The Di-iron
Center In Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (castor Bean).
pdb|2XZ0|A Chain A, The Structure Of The 2:1 (Partially Occupied) Complex
Between Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (Castor Bean) And Acyl Carrier Protein.
pdb|2XZ0|B Chain B, The Structure Of The 2:1 (Partially Occupied) Complex
Between Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (Castor Bean) And Acyl Carrier Protein.
pdb|2XZ0|C Chain C, The Structure Of The 2:1 (Partially Occupied) Complex
Between Stearoyl Acyl Carrier Protein Desaturase From
Ricinus Communis (Castor Bean) And Acyl Carrier Protein.
pdb|2XZ1|A Chain A, The Structure Of The 2:2 (Fully Occupied) Complex Between
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (Castor Bean) And Acyl Carrier Protein.
pdb|2XZ1|B Chain B, The Structure Of The 2:2 (Fully Occupied) Complex Between
Stearoyl Acyl Carrier Protein Desaturase From Ricinus
Communis (Castor Bean) And Acyl Carrier Protein
Length = 363
Score = 246 bits (629), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 114/152 (75%), Positives = 129/152 (84%), Gaps = 4/152 (2%)
Query: 52 THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSD-FTDQVRALRE 110
THSMPP+K+E+FKSL+ WA N+L LKPVEKCWQPQDFLPDP SD F +QVR LRE
Sbjct: 29 THSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDPA---SDGFDEQVRELRE 85
Query: 111 RTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENR 170
R +PDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENR
Sbjct: 86 RAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENR 145
Query: 171 HGDLLRSFLYLSGRVDMLMIEKTVQYLISAGM 202
HGDLL +LYLSGRVDM IEKT+QYLI +GM
Sbjct: 146 HGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGM 177
>pdb|2J2F|A Chain A, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
pdb|2J2F|B Chain B, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
pdb|2J2F|C Chain C, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
pdb|2J2F|D Chain D, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
pdb|2J2F|E Chain E, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
pdb|2J2F|F Chain F, The T199d Mutant Of Stearoyl Acyl Carrier Protein
Desaturase From Ricinus Communis (Castor Bean)
Length = 363
Score = 246 bits (629), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 114/152 (75%), Positives = 129/152 (84%), Gaps = 4/152 (2%)
Query: 52 THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSD-FTDQVRALRE 110
THSMPP+K+E+FKSL+ WA N+L LKPVEKCWQPQDFLPDP SD F +QVR LRE
Sbjct: 29 THSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDPA---SDGFDEQVRELRE 85
Query: 111 RTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENR 170
R +PDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENR
Sbjct: 86 RAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENR 145
Query: 171 HGDLLRSFLYLSGRVDMLMIEKTVQYLISAGM 202
HGDLL +LYLSGRVDM IEKT+QYLI +GM
Sbjct: 146 HGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGM 177
>pdb|1AFR|A Chain A, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
pdb|1AFR|B Chain B, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
pdb|1AFR|C Chain C, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
pdb|1AFR|D Chain D, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
pdb|1AFR|E Chain E, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
pdb|1AFR|F Chain F, Stearoyl-Acyl Carrier Protein Desaturase From Castor Seeds
Length = 345
Score = 246 bits (627), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 114/152 (75%), Positives = 129/152 (84%), Gaps = 4/152 (2%)
Query: 52 THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSD-FTDQVRALRE 110
THSMPP+K+E+FKSL+ WA N+L LKPVEKCWQPQDFLPDP SD F +QVR LRE
Sbjct: 11 THSMPPQKIEIFKSLDNWAEENILVHLKPVEKCWQPQDFLPDPA---SDGFDEQVRELRE 67
Query: 111 RTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENR 170
R +PDDYFVVLVGDMITE+A+PTYQTM+NTLDGVRDETGAS + WAIW R+WTAEENR
Sbjct: 68 RAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAIWTRAWTAEENR 127
Query: 171 HGDLLRSFLYLSGRVDMLMIEKTVQYLISAGM 202
HGDLL +LYLSGRVDM IEKT+QYLI +GM
Sbjct: 128 HGDLLNKYLYLSGRVDMRQIEKTIQYLIGSGM 159
>pdb|2UW1|A Chain A, Ivy Desaturase Structure
Length = 338
Score = 229 bits (585), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 124/152 (81%), Gaps = 4/152 (2%)
Query: 52 THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSD-FTDQVRALRE 110
THSMPP+K+E+FKSL+ WA NNVL LK VEK WQPQD+LPDP SD F +QVR LRE
Sbjct: 4 THSMPPQKLEIFKSLDDWARNNVLIHLKSVEKSWQPQDYLPDPV---SDGFEEQVRELRE 60
Query: 111 RTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENR 170
R +PDDYFVVLVGDMITE+A+PTY +M+N DG++DETGA S WA+W R+WTAEENR
Sbjct: 61 RAKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENR 120
Query: 171 HGDLLRSFLYLSGRVDMLMIEKTVQYLISAGM 202
HGDLL +LYLSGRVDM IEKT+QYLI +GM
Sbjct: 121 HGDLLNKYLYLSGRVDMRKIEKTIQYLIGSGM 152
>pdb|2UW1|B Chain B, Ivy Desaturase Structure
Length = 338
Score = 229 bits (583), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 124/152 (81%), Gaps = 4/152 (2%)
Query: 52 THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQDFLPDPTLPFSD-FTDQVRALRE 110
THSMPP+K+E+FKSL+ WA NNVL LK VEK WQPQD+LPDP SD F +QVR LRE
Sbjct: 4 THSMPPQKLEIFKSLDDWARNNVLIHLKSVEKSWQPQDYLPDPV---SDGFEEQVRELRE 60
Query: 111 RTAGLPDDYFVVLVGDMITEDAIPTYQTMINTLDGVRDETGASSSPWAIWNRSWTAEENR 170
R +PDDYFVVLVGDMITE+A+PTY +M+N DG++DETGA S WA+W R+WTAEENR
Sbjct: 61 RAKEIPDDYFVVLVGDMITEEALPTYMSMLNRCDGIKDETGAEPSAWAMWTRAWTAEENR 120
Query: 171 HGDLLRSFLYLSGRVDMLMIEKTVQYLISAGM 202
HGDLL +LYLSGRVDM IEKT+QYLI +GM
Sbjct: 121 HGDLLNKYLYLSGRVDMRKIEKTIQYLIGSGM 152
>pdb|1ZA0|A Chain A, X-Ray Structure Of Putative Acyl-Acp Desaturase Desa2 From
Mycobacterium Tuberculosis H37rv
Length = 275
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 157 WAIWNRSWTAEENRHGDLLRSFLYLSGRVD 186
W W WTAEE+ H LR +L ++ VD
Sbjct: 96 WGRWLGRWTAEEHLHAIALREYLVVTREVD 125
>pdb|1QKI|A Chain A, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|B Chain B, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|C Chain C, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|D Chain D, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|E Chain E, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|F Chain F, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|G Chain G, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
pdb|1QKI|H Chain H, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase
(Variant Canton R459l) Complexed With Structural Nadp+
Length = 514
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 41 ISAVAAPPKPKTHSMPPEKVEVFKSLETWATNNVL---PLLKPVEKCWQPQDFLPDPTLP 97
+ A+ P + + EKV+V K + NNV+ + P + + +L DPT+P
Sbjct: 269 LVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVP 328
Query: 98 FSDFTDQVRAL-----RERTAGLPDDYFVVLVGDMITE 130
T A+ ER G+P F++ G + E
Sbjct: 329 RGSTTATFAAVVLYVENERWDGVP---FILRCGKALNE 363
>pdb|2BH9|A Chain A, X-Ray Structure Of A Deletion Variant Of Human Glucose 6-
Phosphate Dehydrogenase Complexed With Structural And
Coenzyme Nadp
pdb|2BHL|A Chain A, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
pdb|2BHL|B Chain B, X-Ray Structure Of Human Glucose-6-Phosphate Dehydrogenase
(Deletion Variant) Complexed With Glucose-6-Phosphate
Length = 489
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 41 ISAVAAPPKPKTHSMPPEKVEVFKSLETWATNNVL---PLLKPVEKCWQPQDFLPDPTLP 97
+ A+ P + + EKV+V K + NNV+ + P + + +L DPT+P
Sbjct: 244 LVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVP 303
Query: 98 FSDFTDQVRAL-----RERTAGLPDDYFVVLVGDMITE 130
T A+ ER G+P F++ G + E
Sbjct: 304 RGSTTATFAAVVLYVENERWDGVP---FILRCGKALNE 338
>pdb|3AFI|E Chain E, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|A Chain A, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|B Chain B, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|F Chain F, Crystal Structure Of Dbja (His-Dbja)
Length = 316
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 16/95 (16%)
Query: 33 SSTVRFRQISAVAAPPKPKTHSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQP----- 87
S++ +R+ A AP H P S W N+LPL+ PV C P
Sbjct: 16 GSSMAYRETGAQDAPVVLFLHGNP-------TSSHIW--RNILPLVSPVAHCIAPDLIGF 66
Query: 88 -QDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFV 121
Q PD F D + A E+ G+ Y V
Sbjct: 67 GQSGKPDIAYRFFDHVRYLDAFIEQR-GVTSAYLV 100
>pdb|3A2M|A Chain A, Crystal Structure Of Dbja (Wild Type Type I)
pdb|3A2M|B Chain B, Crystal Structure Of Dbja (Wild Type Type I)
pdb|3A2N|A Chain A, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|B Chain B, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|E Chain E, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|F Chain F, Crystal Structure Of Dbja (Wild Type Type Ii P21)
Length = 312
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 16/95 (16%)
Query: 33 SSTVRFRQISAVAAPPKPKTHSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQP----- 87
S++ +R+ A AP H P S W N+LPL+ PV C P
Sbjct: 16 GSSMAYRETGAQDAPVVLFLHGNP-------TSSHIW--RNILPLVSPVAHCIAPDLIGF 66
Query: 88 -QDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFV 121
Q PD F D + A E+ G+ Y V
Sbjct: 67 GQSGKPDIAYRFFDHVRYLDAFIEQR-GVTSAYLV 100
>pdb|1LQT|A Chain A, A Covalent Modification Of Nadp+ Revealed By The Atomic
Resolution Structure Of Fpra, A Mycobacterium
Tuberculosis Oxidoreductase
pdb|1LQT|B Chain B, A Covalent Modification Of Nadp+ Revealed By The Atomic
Resolution Structure Of Fpra, A Mycobacterium
Tuberculosis Oxidoreductase
pdb|1LQU|A Chain A, Mycobacterium Tuberculosis Fpra In Complex With Nadph
pdb|1LQU|B Chain B, Mycobacterium Tuberculosis Fpra In Complex With Nadph
Length = 456
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 91 LPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLV-----GDMIT--EDAIPTYQTMINTL 143
+P P LPF D + + + R G P++Y V + G + T +DA T T+I L
Sbjct: 327 VPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNL 386
Query: 144 DGVRDETGASSSP 156
++ S P
Sbjct: 387 GNAKEGAECKSFP 399
>pdb|3A2L|A Chain A, Crystal Structure Of Dbja (Mutant Dbja Delta)
pdb|3A2L|B Chain B, Crystal Structure Of Dbja (Mutant Dbja Delta)
Length = 309
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 16/95 (16%)
Query: 33 SSTVRFRQISAVAAPPKPKTHSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQP----- 87
S++ +R+ A AP H P S W N+LPL+ PV C P
Sbjct: 16 GSSMAYRETGAQDAPVVLFLHGNP-------TSSHIW--RNILPLVSPVAHCIAPDLIGF 66
Query: 88 -QDFLPDPTLPFSDFTDQVRALRERTAGLPDDYFV 121
Q PD F D + A E+ G+ Y V
Sbjct: 67 GQSGKPDIAYRFFDHVRYLDAFIEQR-GVTSAYLV 100
>pdb|2C7G|A Chain A, Fpra From Mycobacterium Tuberculosis: His57gln Mutant
Length = 456
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 91 LPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLV-----GDMIT--EDAIPTYQTMINTL 143
+P P LPF D + + + R G P++Y V + G + T +DA T T+I L
Sbjct: 327 VPTPGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNL 386
Query: 144 DGVRDETGASSSP 156
++ S P
Sbjct: 387 GNAKEGAECKSFP 399
>pdb|3QKZ|A Chain A, Crystal Structure Of Mutant His269arg Akr1b14
pdb|3QKZ|B Chain B, Crystal Structure Of Mutant His269arg Akr1b14
Length = 316
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 25 AHHRLTAASSTVRFRQISAVAAPPKPKTHSMPPEKVEVF 63
A H+ T A +RF VA PK T S E ++VF
Sbjct: 239 AKHKKTIAQVLIRFHVQRNVAVIPKSVTLSRIKENIQVF 277
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,282,397
Number of Sequences: 62578
Number of extensions: 256572
Number of successful extensions: 505
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 493
Number of HSP's gapped (non-prelim): 15
length of query: 202
length of database: 14,973,337
effective HSP length: 94
effective length of query: 108
effective length of database: 9,091,005
effective search space: 981828540
effective search space used: 981828540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)