BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037663
(283 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STX2|VEP1_ARATH 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Arabidopsis thaliana
GN=VEP1 PE=1 SV=1
Length = 388
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 163/279 (58%), Gaps = 14/279 (5%)
Query: 7 KNVAVIFGVTGLVGKELARRL----ISTANWKVYGIAREPEITAIQSSSYCFISCDLLNP 62
++VA+I GVTG+VG LA L WKVYG+AR P T +I CD+ +
Sbjct: 26 ESVALIIGVTGIVGNSLAEILPLSDTPGGPWKVYGVARRPRPTWNADHPIDYIQCDVSDA 85
Query: 63 LDIKRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCYALNAILPRAKALKHVSLQ 122
D + KL+ L DVTH+F+VTW ++ + + CE N +M+ L AI+P A L+HV LQ
Sbjct: 86 EDTRSKLSPLTDVTHVFYVTWTNRESES--ENCEANGSMLRNVLQAIIPYAPNLRHVCLQ 143
Query: 123 TGMKHYVS-LQGLPEEKQVRFYDEECPRVSKSNNFYYVLEDLLKEKLAG--KVAWSVHRP 179
TG KHY+ + + + E+ PR+ + NFYY ED+L E++ V WS+HRP
Sbjct: 144 TGTKHYLGPFTNVDGPRHDPPFTEDMPRL-QIQNFYYTQEDILFEEIKKIETVTWSIHRP 202
Query: 180 GLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCIDGSDSRLVAEQHIW 239
++ G S SL N +G LCVY A+CKH P +F G+++ WE + + SD+ L+AEQ IW
Sbjct: 203 NMIFGFSPYSLMNIVGTLCVYAAICKHEGSPLLFPGSKKAWEGF-MTASDADLIAEQQIW 261
Query: 240 AATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVK 278
AA + K +AFN N F WK +W + ++FG++
Sbjct: 262 AAVD---PYAKNEAFNCNNADIFKWKHLWKILAEQFGIE 297
>sp|Q6PQJ9|5BPOR_DIGLA 3-oxo-Delta(4,5)-steroid 5-beta-reductase OS=Digitalis lanata PE=1
SV=1
Length = 389
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/282 (41%), Positives = 161/282 (57%), Gaps = 23/282 (8%)
Query: 8 NVAVIFGVTGLVGKELARRL----ISTANWKVYGIAREPEITAIQSSSYCFISCDLLNPL 63
+VA+I GVTG++G LA L WKVYG+AR + + ++ CD+ +P
Sbjct: 27 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPD 86
Query: 64 DIKRKLTLLEDVTHIFWVTWASQFASDMHKCCEQNKAMMCYALNAILPRAKALKHVSLQT 123
D + KL+ L DVTH+F+VTWA++ S + CE N M L+A++P LKH+SLQT
Sbjct: 87 DSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQT 144
Query: 124 GMKHYVSLQGLPEEKQVRF------YDEECPRVSKSNNFYYVLEDLLKEKLAGK--VAWS 175
G KHY+ P E + Y E+ PR+ K NFYY LED++ E++ K + WS
Sbjct: 145 GRKHYMG----PFESYGKIESHDPPYTEDLPRL-KYMNFYYDLEDIMLEEVEKKEGLTWS 199
Query: 176 VHRPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCIDGSDSRLVAE 235
VHRPG + G S S+ N +G LCVY A+CKH F G + W+ Y D SD+ L+AE
Sbjct: 200 VHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYS-DCSDADLIAE 258
Query: 236 QHIWAATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGV 277
HIWAA + K +AFN NG F WK W + ++FGV
Sbjct: 259 HHIWAAVD---PYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV 297
>sp|O74913|YJ72_SCHPO Uncharacterized protein C757.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC757.02c PE=4 SV=1
Length = 405
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 142/285 (49%), Gaps = 23/285 (8%)
Query: 9 VAVIFGVTGLVGKELARRLISTANWK-VYGIAREPEITAIQSSSYCFISCDLLN--PLDI 65
VA++ G TGL G + +RL N K ++ I+R + + + S DLLN P DI
Sbjct: 7 VAIVTGATGLNGAAIIKRLSEDDNCKTIHCISRSLKDEYPRKIKHH--SIDLLNEEPKDI 64
Query: 66 KRKLTLLEDVTHIFWVTWAS-QFASDMHKCCEQNKAMMCYALNAI-LPRAKALKHVSLQT 123
+K +L E V I + +A+ + ++ K CE N M+ + A+ L + L+ V L T
Sbjct: 65 AKKFSL-EGVKGINYAYFAAYKEENNEEKLCEVNGNMLRNFVQALELTSIQTLRRVILTT 123
Query: 124 GMKHYVSLQGLPEEKQVRF----YDEECPRV-SKSNNFYYVLEDLLKEKLAGKV-AWSVH 177
G+K Y G +VR D P S + NFYYV ED+LKE GK +++
Sbjct: 124 GLKFYGLHLG-----EVRLPMIETDIRVPETFSGTPNFYYVQEDILKEFSNGKKWDYTIA 178
Query: 178 RPGLLLGSSHRSLYNFLGCLCVYGAVCKHLNLPFVFGGTREIWEEYCIDGSDSRLVAEQH 237
P + G S S N + +Y VC+ L+ PF F G + + + D S S+L+A+
Sbjct: 179 MPNDICGVSKGSYMNEAFTIALYALVCRELHEPFRFPGNEKFYLGFD-DISYSKLIADFQ 237
Query: 238 IWAATNDDISSTKGQAFNAINGPRFTWKEIWPSIGKKFGVKVPES 282
+W + S K FN +NG +W WP I + FGV+VP++
Sbjct: 238 LWMTFKAECSEEK---FNIVNGDIHSWSRTWPKIAEYFGVEVPKN 279
>sp|Q8D341|ARNA_WIGBR Bifunctional polymyxin resistance protein ArnA OS=Wigglesworthia
glossinidia brevipalpis GN=arnA PE=3 SV=1
Length = 654
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 1 GREVDAKNVA--------VIFGVTGLVGKELARRLISTANWKVYGIAREPEI--TAIQSS 50
G+++ KN+ +I GV G +G + L+ N+K+YGI + + + I +
Sbjct: 300 GKKLIIKNIKSFKNLKKILILGVNGFIGYHITNLLLKYNNYKIYGIDIKNNLVKSFIGNE 359
Query: 51 SYCFISCDL 59
+CFI D+
Sbjct: 360 KFCFIKGDI 368
>sp|A4WAM3|ARNA_ENT38 Bifunctional polymyxin resistance protein ArnA OS=Enterobacter sp.
(strain 638) GN=arnA PE=3 SV=1
Length = 660
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYG--IAREPEITAIQSSSYCFISCDL 59
+I GV G +G L RL+ N++VYG I + I +S + F+ D+
Sbjct: 319 LILGVNGFIGNHLTERLLQDDNFEVYGLDIGSDAISRFIGNSRFHFVEGDI 369
>sp|B5XTK9|ARNA_KLEP3 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella
pneumoniae (strain 342) GN=arnA PE=3 SV=1
Length = 661
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYG--IAREPEITAIQSSSYCFISCDL 59
+I GV G +G L RL+ N+++YG I + ++S + F+ D+
Sbjct: 319 LILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLESPRFHFVEGDI 369
>sp|Q7N3Q7|ARNA_PHOLL Bifunctional polymyxin resistance protein ArnA OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=arnA PE=3
SV=1
Length = 660
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 3 EVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGI 38
+++ + +I GV G +G L RL+ N+ +YG+
Sbjct: 311 QINHRKRVLILGVNGFIGNHLTERLLRDGNYDIYGM 346
>sp|P65685|Y2073_MYCBO Uncharacterized protein Mb2073c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2073c PE=3 SV=1
Length = 854
Score = 33.5 bits (75), Expect = 2.0, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 12 IFGVTGLVGKELARRLISTANWKVYGIAREPEITAIQSSSYCFISCDLLNPLDIKRKLTL 71
+ G +G++G+ L RL+S + +V GIAR + SS FI+ D+ + ++ +T
Sbjct: 5 VTGASGVLGRGLTARLLSQGH-EVVGIARHRPDS--WPSSADFIAADIRDATAVESAMTG 61
Query: 72 LEDVTHIFWV 81
+ V H WV
Sbjct: 62 ADVVAHCAWV 71
>sp|P65684|Y2047_MYCTU Uncharacterized protein Rv2047c/MT2107 OS=Mycobacterium
tuberculosis GN=Rv2047c PE=3 SV=1
Length = 854
Score = 33.5 bits (75), Expect = 2.0, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 12 IFGVTGLVGKELARRLISTANWKVYGIAREPEITAIQSSSYCFISCDLLNPLDIKRKLTL 71
+ G +G++G+ L RL+S + +V GIAR + SS FI+ D+ + ++ +T
Sbjct: 5 VTGASGVLGRGLTARLLSQGH-EVVGIARHRPDS--WPSSADFIAADIRDATAVESAMTG 61
Query: 72 LEDVTHIFWV 81
+ V H WV
Sbjct: 62 ADVVAHCAWV 71
>sp|B4ETL7|ARNA_PROMH Bifunctional polymyxin resistance protein ArnA OS=Proteus mirabilis
(strain HI4320) GN=arnA PE=3 SV=1
Length = 660
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 3 EVDAKNVAVIFGVTGLVGKELARRLISTANWKVYGI 38
+V + +I GV G +G L RL+ N+ +YG+
Sbjct: 311 QVKRRQRVLILGVNGFIGNHLTERLLKDGNYDIYGM 346
>sp|Q8K2T1|NMRL1_MOUSE NmrA-like family domain-containing protein 1 OS=Mus musculus
GN=Nmral1 PE=1 SV=1
Length = 309
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 11/130 (8%)
Query: 7 KNVAVIFGVTGLVGKELARRLISTANWKVYGIAREPEITAIQSSSYCFISCDLLNPLDIK 66
+ + V+FG TG G +AR L+ +++ + R PE A + + D
Sbjct: 4 RKLVVVFGATGAQGGSVARALLEDGTFRIRVVTRNPEQRAAKELKQQGAEVVRGDQDDAA 63
Query: 67 RKLTLLEDVTHIFWVT--WASQFASDMHKCCEQNKAMMCYALNAILPRAKALKHVSLQTG 124
L F VT W + C + + + + + + K L ++ + G
Sbjct: 64 SMELALAGAHATFIVTNYWET--------CSQDREVQQPHQWDQVFKQGKLLADLAKRLG 115
Query: 125 MKHYVSLQGL 134
+ HYV GL
Sbjct: 116 L-HYVVYSGL 124
>sp|O52325|ARNA_SALTY Bifunctional polymyxin resistance protein ArnA OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=arnA PE=2 SV=1
Length = 660
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|B4TPI2|ARNA_SALSV Bifunctional polymyxin resistance protein ArnA OS=Salmonella
schwarzengrund (strain CVM19633) GN=arnA PE=3 SV=1
Length = 660
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|B5FNT9|ARNA_SALDC Bifunctional polymyxin resistance protein ArnA OS=Salmonella dublin
(strain CT_02021853) GN=arnA PE=3 SV=1
Length = 660
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|B5EZH8|ARNA_SALA4 Bifunctional polymyxin resistance protein ArnA OS=Salmonella agona
(strain SL483) GN=arnA PE=3 SV=1
Length = 660
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|C0Q069|ARNA_SALPC Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi C (strain RKS4594) GN=arnA PE=3 SV=1
Length = 660
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|B5RCC4|ARNA_SALG2 Bifunctional polymyxin resistance protein ArnA OS=Salmonella
gallinarum (strain 287/91 / NCTC 13346) GN=arnA PE=3
SV=1
Length = 660
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|B5R272|ARNA_SALEP Bifunctional polymyxin resistance protein ArnA OS=Salmonella
enteritidis PT4 (strain P125109) GN=arnA PE=3 SV=1
Length = 660
Score = 32.7 bits (73), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|P0C0R6|ARNA_SALCH Bifunctional polymyxin resistance protein ArnA OS=Salmonella
choleraesuis (strain SC-B67) GN=arnA PE=3 SV=1
Length = 660
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|B4TBG6|ARNA_SALHS Bifunctional polymyxin resistance protein ArnA OS=Salmonella
heidelberg (strain SL476) GN=arnA PE=3 SV=1
Length = 660
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|A9N5B2|ARNA_SALPB Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=arnA PE=3
SV=1
Length = 660
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|B4SYX1|ARNA_SALNS Bifunctional polymyxin resistance protein ArnA OS=Salmonella
newport (strain SL254) GN=arnA PE=3 SV=1
Length = 660
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL++ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLNEENYEVYGM 346
>sp|Q0VCN1|NMRL1_BOVIN NmrA-like family domain-containing protein 1 OS=Bos taurus
GN=NMRAL1 PE=2 SV=1
Length = 299
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 7 KNVAVIFGVTGLVGKELARRLISTANWKVYGIAREP 42
K + V+FG TG G +AR L+ ++V + R+P
Sbjct: 4 KKLVVVFGATGAQGGSVARTLLEDGTFRVRVVTRDP 39
>sp|Q8Z540|ARNA_SALTI Bifunctional polymyxin resistance protein ArnA OS=Salmonella typhi
GN=arnA PE=3 SV=1
Length = 660
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL+ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLDEENYEVYGM 346
>sp|B5BCP6|ARNA_SALPK Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain AKU_12601) GN=arnA PE=3 SV=1
Length = 660
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL+ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLDEENYEVYGM 346
>sp|Q5PNA6|ARNA_SALPA Bifunctional polymyxin resistance protein ArnA OS=Salmonella
paratyphi A (strain ATCC 9150 / SARB42) GN=arnA PE=3
SV=1
Length = 660
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL+ N++VYG+
Sbjct: 319 LILGVNGFIGNHLTERLLDEENYEVYGM 346
>sp|Q2NRV7|ARNA_SODGM Bifunctional polymyxin resistance protein ArnA OS=Sodalis
glossinidius (strain morsitans) GN=arnA PE=3 SV=1
Length = 660
Score = 32.3 bits (72), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL+ N+++YG+
Sbjct: 319 LILGVNGFIGNHLTERLLRDGNYEIYGL 346
>sp|A6TF98|ARNA_KLEP7 Bifunctional polymyxin resistance protein ArnA OS=Klebsiella
pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=arnA PE=3 SV=1
Length = 661
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 11 VIFGVTGLVGKELARRLISTANWKVYGI 38
+I GV G +G L RL+ N+++YG+
Sbjct: 319 LILGVNGFIGNHLTERLLQDDNYEIYGL 346
>sp|C1GB49|LIS1_PARBD Nuclear distribution protein PAC1 OS=Paracoccidioides brasiliensis
(strain Pb18) GN=PAC1 PE=3 SV=1
Length = 478
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 96 EQNKAMMCYALNAILPR-AKALKHV---SLQTGMKHYVSLQGLPEEK---QVRFYDEECP 148
E +KAM+ Y L+A LP+ A AL+ S+Q +GL E+K VR +
Sbjct: 12 ELHKAMIAYLLSANLPKSAAALREELADSVQLDDSTAKKYEGLLEKKWTSVVRLQKKIMD 71
Query: 149 RVSKSNNFYYVLEDLLKEKLAGK----VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVC 204
S++N L+ LA + V+W H P + SHR +G V+ ++
Sbjct: 72 LESRNNALQSELDSATPTSLARRNQDPVSWLPHAPARHILQSHREPVTCVGFHPVFSSLA 131
>sp|C0S902|LIS1_PARBP Nuclear distribution protein PAC1 OS=Paracoccidioides brasiliensis
(strain Pb03) GN=PAC1 PE=3 SV=1
Length = 497
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 96 EQNKAMMCYALNAILPR-AKALKHV---SLQTGMKHYVSLQGLPEEK---QVRFYDEECP 148
E +KAM+ Y L+A LP+ A AL+ S+Q +GL E+K VR +
Sbjct: 12 ELHKAMIAYLLSANLPKSAAALREELADSVQLDDSTAKKYEGLLEKKWTSVVRLQKKIMD 71
Query: 149 RVSKSNNFYYVLEDLLKEKLAGK----VAWSVHRPGLLLGSSHRSLYNFLGCLCVYGAVC 204
S++N L+ LA + V+W H P + SHR +G V+ ++
Sbjct: 72 LESRNNALQSELDSATPTSLARRNQDPVSWLPHAPARHILQSHREPVTCVGFHPVFSSLA 131
>sp|Q553E9|SMG1_DICDI Probable serine/threonine-protein kinase smg1 OS=Dictyostelium
discoideum GN=smg1 PE=3 SV=1
Length = 2344
Score = 31.2 bits (69), Expect = 9.7, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 28 ISTANWKVYG-----IAREPEITAIQSSSYCFISCDLLNPLDIKRKLTLLEDVTHIFWVT 82
+ST +KVY + P I SSS I + LNP +K TL + W+T
Sbjct: 1339 LSTQKFKVYTEIIKYLNSNPSIITELSSSNYSIPQEQLNPEYYFKKATLTKPENSKLWIT 1398
Query: 83 WASQFASDMHKCCEQN 98
+A ++ EQN
Sbjct: 1399 YADWILNEKSNISEQN 1414
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,727,523
Number of Sequences: 539616
Number of extensions: 4408535
Number of successful extensions: 9622
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9581
Number of HSP's gapped (non-prelim): 32
length of query: 283
length of database: 191,569,459
effective HSP length: 116
effective length of query: 167
effective length of database: 128,974,003
effective search space: 21538658501
effective search space used: 21538658501
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)