Query 037666
Match_columns 375
No_of_seqs 374 out of 4104
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 04:41:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037666.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037666hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3aji_A 26S proteasome non-ATPa 100.0 2.8E-35 9.5E-40 259.9 16.9 196 2-209 21-219 (231)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 1.6E-35 5.4E-40 265.8 14.5 196 2-207 37-235 (253)
3 1oy3_D Transcription factor in 100.0 1.9E-35 6.5E-40 268.5 13.5 196 2-208 23-271 (282)
4 3b7b_A Euchromatic histone-lys 100.0 1.3E-34 4.4E-39 256.6 17.4 195 2-207 25-222 (237)
5 2f8y_A Notch homolog 1, transl 100.0 4.1E-35 1.4E-39 257.5 13.9 195 3-207 6-203 (223)
6 2xai_A ASB-9, ankyrin repeat a 100.0 9.4E-35 3.2E-39 262.0 16.3 190 2-205 17-209 (261)
7 1k1a_A B-cell lymphoma 3-encod 100.0 5.8E-34 2E-38 252.8 17.1 187 9-207 34-228 (241)
8 2dzn_A Probable 26S proteasome 100.0 5.5E-34 1.9E-38 250.9 16.2 195 3-205 17-218 (228)
9 3d9h_A CDNA FLJ77766, highly s 100.0 6.2E-34 2.1E-38 260.1 16.3 190 2-205 73-265 (285)
10 1s70_B 130 kDa myosin-binding 100.0 2.8E-34 9.7E-39 263.4 12.7 198 2-211 54-281 (299)
11 4b93_B Ankyrin repeat domain-c 100.0 1.7E-34 5.7E-39 261.6 10.1 193 2-206 25-229 (269)
12 3utm_A Tankyrase-1; tankyrase, 100.0 4.6E-33 1.6E-37 260.3 18.2 110 2-115 39-148 (351)
13 4b93_B Ankyrin repeat domain-c 100.0 6.8E-34 2.3E-38 257.6 10.8 162 2-168 67-229 (269)
14 1oy3_D Transcription factor in 100.0 3.5E-33 1.2E-37 253.4 14.2 180 15-206 3-236 (282)
15 4gpm_A Engineered protein OR26 100.0 6.5E-33 2.2E-37 233.4 14.6 156 24-190 6-164 (169)
16 3utm_A Tankyrase-1; tankyrase, 100.0 9.3E-33 3.2E-37 258.2 16.6 199 2-212 72-330 (351)
17 1wdy_A 2-5A-dependent ribonucl 100.0 1.7E-32 5.6E-37 248.9 16.9 199 2-206 19-230 (285)
18 2fo1_E LIN-12 protein; beta-ba 100.0 6.7E-33 2.3E-37 262.9 14.5 191 5-206 150-357 (373)
19 3b7b_A Euchromatic histone-lys 100.0 2.1E-32 7.1E-37 242.4 16.1 182 13-206 3-188 (237)
20 1yyh_A HN1;, notch 1, ankyrin 100.0 3.7E-33 1.3E-37 250.3 11.2 182 13-206 2-201 (253)
21 1wdy_A 2-5A-dependent ribonucl 100.0 3.2E-32 1.1E-36 247.0 17.5 193 2-206 53-264 (285)
22 2rfa_A Transient receptor pote 100.0 1.4E-32 4.9E-37 242.7 14.8 177 21-206 2-208 (232)
23 3kea_A K1L; tropism, ANK repea 100.0 1.2E-32 4.2E-37 251.5 14.8 187 2-206 14-206 (285)
24 3ljn_A Hypothetical protein; a 100.0 1.3E-32 4.6E-37 259.6 14.0 191 2-206 34-255 (364)
25 1n11_A Ankyrin; clathrin, BAND 100.0 2.6E-32 8.9E-37 263.8 16.3 190 3-204 161-353 (437)
26 3hra_A Ankyrin repeat family p 100.0 6.3E-32 2.2E-36 233.2 15.2 184 19-206 2-189 (201)
27 2xai_A ASB-9, ankyrin repeat a 100.0 5.3E-32 1.8E-36 243.9 15.3 188 2-205 50-248 (261)
28 1sw6_A Regulatory protein SWI6 100.0 8.1E-33 2.8E-37 257.7 10.1 186 2-205 111-326 (327)
29 1k1a_A B-cell lymphoma 3-encod 100.0 1.2E-31 4.2E-36 237.8 15.9 181 15-206 3-194 (241)
30 2rfa_A Transient receptor pote 100.0 1.6E-31 5.4E-36 236.0 16.6 170 3-184 19-217 (232)
31 3hra_A Ankyrin repeat family p 100.0 1.3E-31 4.6E-36 231.1 15.0 171 2-183 20-197 (201)
32 2dzn_A Probable 26S proteasome 100.0 2E-31 6.8E-36 234.5 15.5 176 22-206 2-185 (228)
33 1n11_A Ankyrin; clathrin, BAND 100.0 2.3E-31 7.9E-36 257.2 16.9 191 3-205 128-321 (437)
34 3eu9_A Huntingtin-interacting 100.0 2.2E-31 7.4E-36 235.5 15.3 193 2-206 23-221 (240)
35 3d9h_A CDNA FLJ77766, highly s 100.0 2.7E-31 9.2E-36 242.6 15.4 179 14-206 52-233 (285)
36 3aji_A 26S proteasome non-ATPa 100.0 2.2E-31 7.5E-36 234.9 14.3 173 2-186 54-227 (231)
37 1ikn_D Protein (I-kappa-B-alph 100.0 8E-33 2.7E-37 245.3 5.0 178 19-205 5-194 (236)
38 3v30_A DNA-binding protein rfx 100.0 2.9E-31 9.9E-36 223.6 14.4 167 22-198 2-171 (172)
39 4gpm_A Engineered protein OR26 100.0 4.4E-31 1.5E-35 222.1 15.0 146 2-152 18-164 (169)
40 2etb_A Transient receptor pote 100.0 1E-31 3.5E-36 241.0 11.9 177 21-206 1-232 (256)
41 1ikn_D Protein (I-kappa-B-alph 100.0 2E-32 6.8E-37 242.7 7.0 183 11-204 35-228 (236)
42 4g8k_A 2-5A-dependent ribonucl 100.0 4.5E-31 1.5E-35 246.5 16.1 195 2-206 39-284 (337)
43 2rfm_A Putative ankyrin repeat 100.0 2.9E-31 9.9E-36 227.7 13.3 161 12-184 26-187 (192)
44 2f8y_A Notch homolog 1, transl 100.0 9.2E-31 3.1E-35 229.6 16.7 172 2-184 39-211 (223)
45 2etb_A Transient receptor pote 100.0 3.1E-31 1.1E-35 237.9 12.9 169 3-183 21-240 (256)
46 3v31_A Ankyrin repeat family A 100.0 2.5E-30 8.7E-35 216.7 15.1 154 21-185 2-156 (167)
47 3kea_A K1L; tropism, ANK repea 100.0 6.9E-31 2.4E-35 239.9 12.0 178 2-193 45-226 (285)
48 2pnn_A Transient receptor pote 100.0 3.8E-31 1.3E-35 239.7 10.0 195 11-206 3-244 (273)
49 2pnn_A Transient receptor pote 100.0 4.4E-30 1.5E-34 232.7 14.5 180 9-199 38-271 (273)
50 1s70_B 130 kDa myosin-binding 100.0 1E-30 3.5E-35 239.6 9.9 178 19-206 37-243 (299)
51 3ljn_A Hypothetical protein; a 100.0 1E-30 3.5E-35 246.7 10.0 182 11-206 10-222 (364)
52 4hbd_A KN motif and ankyrin re 100.0 3.7E-30 1.3E-34 234.0 12.5 153 14-170 104-263 (276)
53 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.2E-29 4E-34 213.3 13.4 154 19-183 11-165 (169)
54 3jxi_A Vanilloid receptor-rela 100.0 5.7E-30 1.9E-34 230.1 11.9 170 3-183 24-244 (260)
55 1awc_B Protein (GA binding pro 100.0 1.1E-29 3.9E-34 209.8 12.5 150 22-183 2-152 (153)
56 3jxi_A Vanilloid receptor-rela 100.0 3.4E-30 1.2E-34 231.6 10.1 186 19-206 2-236 (260)
57 3eu9_A Huntingtin-interacting 100.0 2.7E-29 9.2E-34 222.0 15.7 179 19-206 6-188 (240)
58 1ihb_A P18-INK4C(INK6), cyclin 100.0 6.8E-30 2.3E-34 212.8 10.8 153 20-183 3-156 (162)
59 3f6q_A Integrin-linked protein 100.0 7.1E-30 2.4E-34 216.7 10.6 166 19-194 2-170 (179)
60 2fo1_E LIN-12 protein; beta-ba 100.0 3.4E-29 1.2E-33 237.4 14.8 173 2-185 180-367 (373)
61 3twr_A Tankyrase-2; ankyrin re 100.0 1.1E-29 3.7E-34 212.5 8.8 155 19-184 5-160 (165)
62 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.9E-29 1.3E-33 207.0 11.8 150 22-183 2-152 (156)
63 2vge_A RELA-associated inhibit 100.0 1.6E-30 5.5E-35 229.8 2.8 189 5-206 2-199 (229)
64 4g8k_A 2-5A-dependent ribonucl 100.0 2.8E-28 9.6E-33 227.5 17.1 184 7-206 111-312 (337)
65 4hbd_A KN motif and ankyrin re 100.0 4.8E-29 1.7E-33 226.6 10.3 180 20-207 74-262 (276)
66 3v30_A DNA-binding protein rfx 100.0 2.2E-28 7.6E-33 205.9 13.4 153 3-160 18-171 (172)
67 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.2E-28 7.5E-33 217.4 10.3 175 19-205 2-191 (239)
68 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.5E-27 1.9E-31 196.9 15.0 140 2-145 28-168 (169)
69 1ihb_A P18-INK4C(INK6), cyclin 99.9 2.6E-27 8.8E-32 197.1 12.7 141 2-148 19-161 (162)
70 1bi7_B P16INK4A, MTS1, multipl 99.9 9.9E-28 3.4E-32 198.8 9.0 141 19-164 9-151 (156)
71 2rfm_A Putative ankyrin repeat 99.9 2.9E-27 1E-31 202.7 12.1 151 47-206 25-178 (192)
72 3f6q_A Integrin-linked protein 99.9 3E-27 1E-31 200.4 11.9 150 3-157 21-171 (179)
73 1d9s_A Cyclin-dependent kinase 99.9 2.7E-27 9.2E-32 191.6 9.7 130 11-145 2-133 (136)
74 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.4E-28 4.9E-33 218.6 2.2 187 2-203 19-226 (239)
75 1sw6_A Regulatory protein SWI6 99.9 1.9E-27 6.4E-32 221.4 8.6 156 2-168 145-327 (327)
76 3v31_A Ankyrin repeat family A 99.9 2E-26 6.9E-31 192.9 13.7 140 2-145 17-157 (167)
77 1awc_B Protein (GA binding pro 99.9 2.4E-26 8.3E-31 189.7 13.5 136 2-142 16-152 (153)
78 3t8k_A Uncharacterized protein 99.9 4E-27 1.4E-31 201.1 8.5 151 22-184 6-174 (186)
79 3twr_A Tankyrase-2; ankyrin re 99.9 9E-27 3.1E-31 194.6 10.5 151 53-211 4-157 (165)
80 2vge_A RELA-associated inhibit 99.9 7.3E-29 2.5E-33 219.2 -2.7 161 2-170 35-201 (229)
81 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.5E-26 8.6E-31 190.0 12.7 137 3-145 18-155 (156)
82 2jab_A H10-2-G3; HER2, darpin, 99.9 1.8E-25 6E-30 180.8 10.8 124 19-145 11-135 (136)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 5.3E-25 1.8E-29 174.7 13.0 124 21-148 1-125 (126)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 6.4E-26 2.2E-30 187.9 7.7 143 49-201 4-150 (156)
85 1d9s_A Cyclin-dependent kinase 99.9 1.6E-25 5.6E-30 181.0 7.5 127 47-183 2-130 (136)
86 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-25 4.6E-30 181.6 5.6 129 11-144 1-130 (137)
87 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-24 4.9E-29 175.5 8.5 125 49-183 3-128 (137)
88 3ehr_A Osteoclast-stimulating 99.9 8.8E-25 3E-29 191.7 7.4 135 19-157 70-206 (222)
89 3aaa_C Myotrophin, protein V-1 99.9 2.4E-24 8.4E-29 170.9 8.6 116 19-137 4-120 (123)
90 3deo_A Signal recognition part 99.9 1.3E-24 4.5E-29 184.9 6.8 136 19-183 41-178 (183)
91 3t8k_A Uncharacterized protein 99.9 6.2E-25 2.1E-29 187.5 3.8 137 14-154 30-184 (186)
92 2aja_A Ankyrin repeat family p 99.9 4.5E-25 1.5E-29 208.4 2.3 158 19-194 89-257 (376)
93 2b0o_E UPLC1; arfgap, structur 99.9 6.4E-24 2.2E-28 195.1 9.7 139 22-170 151-299 (301)
94 2jab_A H10-2-G3; HER2, darpin, 99.9 1E-23 3.5E-28 170.4 9.7 123 52-183 9-132 (136)
95 2aja_A Ankyrin repeat family p 99.9 9.5E-25 3.3E-29 206.1 3.8 186 2-206 106-360 (376)
96 3ui2_A Signal recognition part 99.9 3.4E-24 1.2E-28 191.0 7.0 137 19-184 42-180 (244)
97 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.4E-23 1.2E-27 164.2 11.1 119 56-183 1-120 (126)
98 3ui2_A Signal recognition part 99.9 2.6E-24 9E-29 191.7 3.5 160 19-208 12-173 (244)
99 3aaa_C Myotrophin, protein V-1 99.9 2.5E-23 8.5E-28 165.0 8.5 113 53-167 3-116 (123)
100 3deo_A Signal recognition part 99.9 9.8E-23 3.4E-27 173.3 12.2 130 53-207 40-171 (183)
101 3ehr_A Osteoclast-stimulating 99.9 1.9E-23 6.3E-28 183.2 7.4 168 19-195 22-206 (222)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.9 6.8E-22 2.3E-26 148.7 10.0 92 21-115 1-92 (93)
103 3jue_A Arfgap with coiled-coil 99.9 4.7E-22 1.6E-26 187.1 10.9 145 20-167 197-347 (368)
104 2b0o_E UPLC1; arfgap, structur 99.8 3.8E-21 1.3E-25 176.5 11.8 137 57-206 151-297 (301)
105 3lvq_E ARF-GAP with SH3 domain 99.8 3.4E-21 1.2E-25 189.1 11.6 136 22-167 132-277 (497)
106 1dcq_A PYK2-associated protein 99.8 2.4E-21 8.4E-26 175.8 8.9 120 23-145 131-260 (278)
107 2l6b_A NR1C; ankyrin, consensu 99.8 2.2E-21 7.4E-26 151.8 5.6 104 19-125 6-110 (115)
108 3jue_A Arfgap with coiled-coil 99.8 8E-21 2.7E-25 178.7 9.9 144 53-205 195-347 (368)
109 2l6b_A NR1C; ankyrin, consensu 99.8 8.4E-21 2.9E-25 148.4 7.1 108 52-161 4-112 (115)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.9E-20 1.3E-24 139.0 10.1 89 56-145 1-90 (93)
111 1dcq_A PYK2-associated protein 99.8 8E-20 2.7E-24 165.8 12.5 160 18-185 62-259 (278)
112 3lvq_E ARF-GAP with SH3 domain 99.8 9.6E-20 3.3E-24 178.8 10.8 135 57-200 132-278 (497)
113 2zgd_A 3 repeat synthetic anky 99.8 4.3E-19 1.5E-23 137.8 8.3 90 18-110 20-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 6.5E-18 2.2E-22 131.0 8.5 95 47-142 14-109 (110)
115 4ev6_A Magnesium transport pro 29.5 64 0.0022 28.9 5.1 21 308-328 281-301 (339)
116 3gvo_A Pumilio 2, pumilio homo 25.2 88 0.003 28.0 5.2 53 19-71 70-123 (351)
117 2iub_A CORA, divalent cation t 23.6 49 0.0017 30.0 3.1 21 308-328 305-325 (363)
118 1gp8_A Protein (scaffolding pr 22.9 60 0.0021 18.8 2.2 17 61-77 17-33 (40)
No 1
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.8e-35 Score=259.91 Aligned_cols=196 Identities=18% Similarity=0.147 Sum_probs=181.9
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
.+++++...+..++.. |.+|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus 21 ~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 97 (231)
T 3aji_A 21 ELKERILADKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQL--GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGA 97 (231)
T ss_dssp HHHHHHHHCGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHhchhhhhcC-CCCCCCHHHHHHHcCcHHHHHHHHHh--CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCC
Confidence 4667777777777776 99999999999999999999999999 88999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
++ +.+|.+|.||||+|+..|+.+++++|++.+. .+.+|..|.||||.|+..|+.+++++|++. +.+++.+|.+|+||
T Consensus 98 ~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~ 175 (231)
T 3aji_A 98 HV-NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY-KASTNIQDTEGNTP 175 (231)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCH
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCCH
Confidence 96 8899999999999999999999999999998 888999999999999999999999999997 99999999999999
Q ss_pred HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHHHH
Q 037666 161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHKEL 209 (375)
Q Consensus 161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~~l 209 (375)
||+|++.++. ++.++| .+++++.+|.+|+||+++|.+.+...
T Consensus 176 L~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 219 (231)
T 3aji_A 176 LHLACDEERV-------EEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLI 219 (231)
T ss_dssp HHHHHHTTCH-------HHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHH
T ss_pred HHHHHHCCCH-------HHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHH
Confidence 9999999987 788877 77889999999999999998766543
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.6e-35 Score=265.78 Aligned_cols=196 Identities=20% Similarity=0.179 Sum_probs=170.4
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.+.|.++|.+++...|.+|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus 37 ~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~ 114 (253)
T 1yyh_A 37 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRA 114 (253)
T ss_dssp ---------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTT
T ss_pred HHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4567788899998776689999999999999999999999999 89999999999999999999999999999999988
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
...+.+|.+|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+..|+.+++++|++. |.+++.+|.+|+||
T Consensus 115 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tp 193 (253)
T 1yyh_A 115 TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETP 193 (253)
T ss_dssp SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCH
Confidence 4358899999999999999999999999999998 888999999999999999999999999998 99999999999999
Q ss_pred HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHH
Q 037666 161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHK 207 (375)
Q Consensus 161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~ 207 (375)
||+|++.++. ++.++| .+++++.+|..|+||+++|.+...
T Consensus 194 L~~A~~~~~~-------~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 194 LFLAAREGSY-------ETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235 (253)
T ss_dssp HHHHHHHTCH-------HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHCCCH-------HHHHHHHHcCCCccccccCCCCHHHHHHHcCC
Confidence 9999999988 888887 788999999999999999987643
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.9e-35 Score=268.45 Aligned_cols=196 Identities=17% Similarity=0.087 Sum_probs=160.4
Q ss_pred HHHHHHhhCccc---cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHc
Q 037666 2 VAKDIYDKYEDE---IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMK 78 (375)
Q Consensus 2 ~v~~lL~~~~~~---~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~ 78 (375)
+++++|.++|.+ ++.. |..|+||||+|+..|+.+++++|+++ +++++.+|..|+||||+|+..|+.+++++|++
T Consensus 23 ~~v~~Ll~~g~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 99 (282)
T 1oy3_D 23 PFLDFLLGFSAGHEYLDLQ-NDLGQTALHLAAILGEASTVEKLYAA--GAGVLVAERGGHTALHLACRVRAHTCACVLLQ 99 (282)
T ss_dssp HHHHHHHHHHTTSGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSS
T ss_pred HHHHHHHhcCCCccccccc-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhc
Confidence 466778877777 7776 88999999999999999999999999 89999999999999999999999999999998
Q ss_pred cCCCC----------------------------------------------ccccCCCCChHHHHHHHcCcHHHHHHHHH
Q 037666 79 GNKDI----------------------------------------------AMVPGGDGTLPIVRAAALGQRQTVVLLYE 112 (375)
Q Consensus 79 ~~~~~----------------------------------------------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~ 112 (375)
.+++. .+.+|..|.||||+|+..|+.+++++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 179 (282)
T 1oy3_D 100 PRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD 179 (282)
T ss_dssp SCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 77541 25678889999999999999999999999
Q ss_pred hcc-CCcccc-hhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhH
Q 037666 113 KTK-GSLTDD-ECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLA 188 (375)
Q Consensus 113 ~~~-~~~~d~-~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~ 188 (375)
.++ ++..+. .|+||||+|+++|+.+++++|+++ |.+++.+|.+|+||||+|++.++. ++.++| +++++
T Consensus 180 ~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~-------~~v~~Ll~~ga~~ 251 (282)
T 1oy3_D 180 AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLRPNP-------ILARLLRAHGAPE 251 (282)
T ss_dssp HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTSSCH-------HHHHHHHHTTCCC
T ss_pred cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHcCCc-------HHHHHHHHcCCCc
Confidence 998 777664 499999999999999999999998 999999999999999999999887 888887 78899
Q ss_pred hhhcCCCCChhhhhHHHHHH
Q 037666 189 EAINTGGLTPTALFSEKHKE 208 (375)
Q Consensus 189 ~~~n~~g~tpl~~a~~~~~~ 208 (375)
+.+|.+|.||++++.....+
T Consensus 252 ~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 252 PEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp CCCC----------------
T ss_pred CcCCCcccccccccCCcccc
Confidence 99999999999998765543
No 4
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.3e-34 Score=256.63 Aligned_cols=195 Identities=21% Similarity=0.145 Sum_probs=179.2
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.++|.++|.+++.. |.+|+||||+|+..|+.+++++|+++ +.+++.+|..|.||||+|+..|+.+++++|++.++
T Consensus 25 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 101 (237)
T 3b7b_A 25 DICHMLVQAGANIDTC-SEDQRTPLMEAAENNHLEAVKYLIKA--GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ 101 (237)
T ss_dssp HHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTT--TCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHHcCCCcCcc-CCCCCCHHHHHHHhCCHHHHHHHHhC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 4677888899999987 89999999999999999999999999 88999999999999999999999999999999984
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
...+.+|..|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||.|+..|+.+++++|++. +.+++.+|.+|+||
T Consensus 102 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~ 180 (237)
T 3b7b_A 102 MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAA-KCDLHAVNIHGDSP 180 (237)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTT-TCCTTCCCTTCCCH
T ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCCH
Confidence 3348889999999999999999999999999998 888999999999999999999999999988 89999999999999
Q ss_pred HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHH
Q 037666 161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHK 207 (375)
Q Consensus 161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~ 207 (375)
||+|++.+.. ++.++| ++++++.+|++|+||+++|....+
T Consensus 181 L~~A~~~~~~-------~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 181 LHIAARENRY-------DCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp HHHHHHTTCH-------HHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred HHHHHHhCCH-------hHHHHHHHcCCCCCccCCCCCCHHHHHHHHHH
Confidence 9999999987 777777 788899999999999999887654
No 5
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.1e-35 Score=257.45 Aligned_cols=195 Identities=20% Similarity=0.180 Sum_probs=180.7
Q ss_pred HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666 3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD 82 (375)
Q Consensus 3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 82 (375)
+.+.|.++|.+++...|.+|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++.
T Consensus 6 ~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~ 83 (223)
T 2f8y_A 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA--SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT 83 (223)
T ss_dssp CEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTS
T ss_pred HHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 445677889999877689999999999999999999999999 899999999999999999999999999999999884
Q ss_pred CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHH
Q 037666 83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETAL 161 (375)
Q Consensus 83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~L 161 (375)
..+.+|.+|.||||+|+..|+.+++++|++.+. ++..|..|+||||+|+..++.+++++|+++ +.+++.+|.+|+|||
T Consensus 84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L 162 (223)
T 2f8y_A 84 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPL 162 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHH
T ss_pred CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCcCHH
Confidence 458889999999999999999999999999998 888999999999999999999999999998 999999999999999
Q ss_pred HHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHH
Q 037666 162 HVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHK 207 (375)
Q Consensus 162 h~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~ 207 (375)
|+|++.++. ++.++| .+++++.+|..|.||+++|.+...
T Consensus 163 ~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 203 (223)
T 2f8y_A 163 FLAAREGSY-------ETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203 (223)
T ss_dssp HHHHHHTCH-------HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHcCCH-------HHHHHHHHcCCCCccccccCCCHHHHHHHhcc
Confidence 999999988 788877 778899999999999999887643
No 6
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=9.4e-35 Score=261.98 Aligned_cols=190 Identities=20% Similarity=0.136 Sum_probs=177.0
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.+.|.++|.+++.. |.+|+||||+|+..|+.+++++|+++ +.+++.+|.+|+||||+|+..|+.+++++|++.++
T Consensus 17 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (261)
T 2xai_A 17 LSLRNLISQGWAVNII-TADHVSPLHEACLGGHLSCVKILLKH--GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA 93 (261)
T ss_dssp HHHHHHHHTTCCSSCC-CTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 4677888899999997 99999999999999999999999999 89999999999999999999999999999999998
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
+. + .+.+|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+..++.++++.|++. |.+++. |.+|+||
T Consensus 94 ~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~g~t~ 169 (261)
T 2xai_A 94 SV-Q-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES-GADVNQ-GKGQDSP 169 (261)
T ss_dssp CS-S-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHH-TCCTTC-CBTTBCH
T ss_pred CC-C-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHc-CCCCCC-CCCCCCh
Confidence 86 3 46679999999999999999999999998 888999999999999999999999999998 888885 8999999
Q ss_pred HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666 161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK 205 (375)
Q Consensus 161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~ 205 (375)
||+|++.++. ++.++| .+++++.+|.+|+||+++|.+.
T Consensus 170 Lh~A~~~~~~-------~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 170 LHAVARTASE-------ELACLLMDFGADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp HHHHHHHTCH-------HHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred HHHHHHcCCH-------HHHHHHHHcCCCCCCcCCCCCChhhhcccc
Confidence 9999999988 888877 7899999999999999998743
No 7
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.8e-34 Score=252.78 Aligned_cols=187 Identities=18% Similarity=0.155 Sum_probs=173.8
Q ss_pred hCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC----CCc
Q 037666 9 KYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK----DIA 84 (375)
Q Consensus 9 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~----~~~ 84 (375)
+.|.+++.. |..|.||||+|+..|+.+++++|+++ +.+++.+|..|.||||+|+..|+.++++.|++.++ +.
T Consensus 34 ~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~- 109 (241)
T 1k1a_A 34 QGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTA--GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL- 109 (241)
T ss_dssp HTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCT-
T ss_pred hcCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc-
Confidence 589999987 99999999999999999999999999 89999999999999999999999999999999987 54
Q ss_pred cccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCccc-chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHH
Q 037666 85 MVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTD-DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALH 162 (375)
Q Consensus 85 ~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d-~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh 162 (375)
+.+|.+|.||||+|+..|+.+++++|++.+. .+..+ ..|.||||+|+..|+.+++++|++. |.+++.+|.+|+||||
T Consensus 110 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~ 188 (241)
T 1k1a_A 110 EARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH-GANVNAQMYSGSSALH 188 (241)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCBCTTSCBHHH
T ss_pred cccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHH
Confidence 7789999999999999999999999999998 77777 7899999999999999999999998 9999999999999999
Q ss_pred HHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHH
Q 037666 163 VLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHK 207 (375)
Q Consensus 163 ~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~ 207 (375)
+|++.++. ++.++| .+++++.+|.+|+||+++|.+...
T Consensus 189 ~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 189 SASGRGLL-------PLVRTLVRSGADSSLKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp HHHHHTCH-------HHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHH
T ss_pred HHHHcCCH-------HHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCc
Confidence 99999988 788877 788999999999999999876544
No 8
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=5.5e-34 Score=250.93 Aligned_cols=195 Identities=13% Similarity=0.064 Sum_probs=172.6
Q ss_pred HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhc-hhcCCChHHHHHHHcCcHHHHHHHHccC-
Q 037666 3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAK-KNKIGCTAFFYAAGSGMVEIVEEAMKGN- 80 (375)
Q Consensus 3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~-~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~- 80 (375)
+.+.|.+.+.+.+...|.+|+||||+|+..|+.+++++|+++....+++. .|..|+||||+|+..|+.++++.|++.+
T Consensus 17 ~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 96 (228)
T 2dzn_A 17 KVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPL 96 (228)
T ss_dssp HHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSS
T ss_pred HHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 44555555555554349999999999999999999999999932255666 8899999999999999999999999998
Q ss_pred -CCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCC
Q 037666 81 -KDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEE 158 (375)
Q Consensus 81 -~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~ 158 (375)
++. +.+|.+|.||||+|+..|+.+++++|++++. ++.+|..|+||||+|+..|+.++++.|++..+.+++.+|.+|+
T Consensus 97 ~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~ 175 (228)
T 2dzn_A 97 KPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGW 175 (228)
T ss_dssp CCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSC
T ss_pred Cccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCC
Confidence 675 7889999999999999999999999999998 8889999999999999999999999999984499999999999
Q ss_pred cHHHHHHHhcCCCCCCCccchhhcc---chhhHhhhcCCCCChhhhhHHH
Q 037666 159 TALHVLARKNLTSSNQNPCGVENVV---PKKLAEAINTGGLTPTALFSEK 205 (375)
Q Consensus 159 T~Lh~A~~~~~~~~~~~~~~v~~~L---~~~~~~~~n~~g~tpl~~a~~~ 205 (375)
||||+|++.++. ++.++| .+++++.+|.+|+||+++|.+.
T Consensus 176 t~L~~A~~~~~~-------~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 176 TPLFHALAEGHG-------DAAVLLVEKYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp CHHHHHHHTTCH-------HHHHHHHHHHCCCSCCBCTTSCBGGGGCSST
T ss_pred CHHHHHHHcCCH-------HHHHHHHHhcCCCCCccCCCCCcHHHHHHHH
Confidence 999999999988 777776 4789999999999999998654
No 9
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.2e-34 Score=260.07 Aligned_cols=190 Identities=19% Similarity=0.132 Sum_probs=173.8
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.+.|.++|.+++.. |.+|+||||+|+..|+.+++++|+++ +.+++.+|.+|+||||+|+..|+.+++++|++.++
T Consensus 73 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 149 (285)
T 3d9h_A 73 LSLRNLISQGWAVNII-TADHVSPLHEACLGGHLSCVKILLKH--GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA 149 (285)
T ss_dssp HHHHHHHHTTCCSCEE-CTTCCCHHHHHHHTTCHHHHHHHHHT--TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCCCc-CCCCCCHHHHHHHCCcHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCC
Confidence 4677888899999987 99999999999999999999999999 89999999999999999999999999999999998
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
+. + .+.+|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+..|+.+++++|++. +.+++. |.+|+||
T Consensus 150 ~~-~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~-~~~g~t~ 225 (285)
T 3d9h_A 150 SV-Q-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLES-GADVNQ-GKGQDSP 225 (285)
T ss_dssp CS-S-CSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHT-TCCTTC-CBTTBCH
T ss_pred CC-C-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHC-CCCCCC-CCCCCCH
Confidence 86 3 35569999999999999999999999998 888999999999999999999999999998 888884 8999999
Q ss_pred HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666 161 LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK 205 (375)
Q Consensus 161 Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~ 205 (375)
||+|++.++. ++.++| .+++++.+|.+|+||+++|.+.
T Consensus 226 L~~A~~~~~~-------~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 265 (285)
T 3d9h_A 226 LHAVVRTASE-------ELACLLMDFGADTQAKNAEGKRPVELVPPE 265 (285)
T ss_dssp HHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred HHHHHHcCCH-------HHHHHHHHCCCCCCCcCCCCCCHHHHhcCc
Confidence 9999999988 788877 7889999999999999999843
No 10
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.8e-34 Score=263.36 Aligned_cols=198 Identities=17% Similarity=0.093 Sum_probs=176.6
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++++.|.++|+++|.. |.+|.||||+|+..|+.+++++|+++ +++++.+|..|+||||+|+..|+.+++++|++.++
T Consensus 54 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 130 (299)
T 1s70_B 54 EEVLRLLERGADINYA-NVDGLTALHQACIDDNVDMVKFLVEN--GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGA 130 (299)
T ss_dssp HHHHHHHHHCCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Confidence 4567777889999987 99999999999999999999999998 89999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhccC----------------------------CcccchhhHHHHHHHhc
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKG----------------------------SLTDDECIELLVKLIET 133 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~----------------------------~~~d~~g~t~Lh~A~~~ 133 (375)
++ +.+|.+|.||||+|+..|+.++++.++..... ...+..|.||||+|+..
T Consensus 131 ~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~ 209 (299)
T 1s70_B 131 HV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK 209 (299)
T ss_dssp CT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH
T ss_pred CC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHC
Confidence 86 88899999999999999999999887765431 12456799999999999
Q ss_pred CcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHHHHHH
Q 037666 134 DLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHKELKR 211 (375)
Q Consensus 134 ~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~~l~~ 211 (375)
|+.++++.|++. |.++|.+|.+|+||||+|+..++. ++.++| .+++++.+|..|+||+++|.+...+.++
T Consensus 210 g~~~~v~~Ll~~-g~d~~~~d~~g~tpL~~A~~~~~~-------~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~ 281 (299)
T 1s70_B 210 GYTEVLKLLIQA-RYDVNIKDYDGWTPLHAAAHWGKE-------EACRILVENLCDMEAVNKVGQTAFDVADEDILGYLE 281 (299)
T ss_dssp TCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHH
T ss_pred CcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHhcCCH-------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 999999999987 999999999999999999999988 888887 7889999999999999999876544433
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=261.64 Aligned_cols=193 Identities=13% Similarity=0.077 Sum_probs=150.7
Q ss_pred HHHHHHhhCccc--------cccccCCCCCcHHHHHHHcCCH-HHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHH
Q 037666 2 VAKDIYDKYEDE--------IGQEITNLGNTALHVAAQANCI-DFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEI 72 (375)
Q Consensus 2 ~v~~lL~~~~~~--------~~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~i 72 (375)
+++++|++.+.+ ++.. |..|.||||.|+..++. ++++.|++. |.++|.+|.+|+||||+|+..|+.++
T Consensus 25 ~~v~~LL~~~~~~~~~~~~~~~~~-~~~~~t~L~~a~~~~~~~~~v~~Ll~~--Gadvn~~d~~G~TpLh~A~~~g~~~~ 101 (269)
T 4b93_B 25 EMVRYLLEWTEEDLEDAEDTVSAA-DPEFCHPLCQCPKCAPAQKRLAKVPAS--GLGVNVTSQDGSSPLHVAALHGRADL 101 (269)
T ss_dssp HHHHHHHTCC-----------------------------------------C--CCCTTCCCTTSCCHHHHHHHTTCTTH
T ss_pred HHHHHHHHCCCccccccccccccc-CccCCCHHHHHHHhCCHHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 456777777664 3444 77899999999998875 478899998 89999999999999999999999999
Q ss_pred HHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccc
Q 037666 73 VEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLAT 151 (375)
Q Consensus 73 v~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~ 151 (375)
+++|++.+++. +.++.+|.||+|.|+..++.+++++|++.++ ++.+|..|+||||+|+.+|+.++++.|++. |.++|
T Consensus 102 v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-gadvn 179 (269)
T 4b93_B 102 IPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQH-GASIN 179 (269)
T ss_dssp HHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHT-TCCTT
T ss_pred HHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCC
Confidence 99999999996 8899999999999999999999999999998 888999999999999999999999999998 99999
Q ss_pred cccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 152 KRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 152 ~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
.+|.+|+||||+|+..|+. +++++| .|++++.+|++|+||+++|.++.
T Consensus 180 ~~~~~g~t~Lh~A~~~g~~-------~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 180 ASNNKGNTALHEAVIEKHV-------FVVELLLLHGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp CBCTTSCBHHHHHHHTTCH-------HHHHHHHHTTCCSCCCCTTSCCSGGGSCTTC
T ss_pred ccccCCCcHHHHHHHcCCH-------HHHHHHHHCCCCCCCcCCCCCCHHHHHHhCC
Confidence 9999999999999999988 888887 78899999999999999997643
No 12
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.6e-33 Score=260.31 Aligned_cols=110 Identities=21% Similarity=0.173 Sum_probs=86.8
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
.++++|.+.+.+++.. |..|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus 39 ~v~~ll~~~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~ 115 (351)
T 3utm_A 39 KLMALLTPLNVNCHAS-DGRKSTPLHLAAGYNRVRIVQLLLQH--GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGA 115 (351)
T ss_dssp HHHHHCCTTTTTCCCS-STTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCC
Confidence 3566777777777776 77888888888888888888888887 77788888888888888888888888888888877
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK 115 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 115 (375)
++ +.+|..|.||||+|+..|+.+++++|++++.
T Consensus 116 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 148 (351)
T 3utm_A 116 CV-NAMDLWQFTPLHEAASKNRVEVCSLLLSHGA 148 (351)
T ss_dssp CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 75 6777788888888888888888877777655
No 13
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-34 Score=257.61 Aligned_cols=162 Identities=17% Similarity=0.169 Sum_probs=149.1
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.++|.+.|+++|.. |.+|+||||+|+..|+.++|++|++. +++++..+.+|.||+|+|+..++.++++.|++.++
T Consensus 67 ~~v~~Ll~~Gadvn~~-d~~G~TpLh~A~~~g~~~~v~~Ll~~--~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~ 143 (269)
T 4b93_B 67 KRLAKVPASGLGVNVT-SQDGSSPLHVAALHGRADLIPLLLKH--GANAGARNADQAVPLHLACQQGHFQVVKCLLDSNA 143 (269)
T ss_dssp --------CCCCTTCC-CTTSCCHHHHHHHTTCTTHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHhc--CCCcCccCCCCCCccccccccChHHHHHHHHHCCC
Confidence 3567788899999998 99999999999999999999999999 89999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
++ +.+|.+|+||||+|+..|+.+++++|++.++ ++.+|..|+||||+|+.+|+.++++.|+++ |.+++.+|.+|+||
T Consensus 144 ~~-n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~Tp 221 (269)
T 4b93_B 144 KP-NKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLH-GASVQVLNKRQRTA 221 (269)
T ss_dssp CS-CCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCS
T ss_pred CC-CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCH
Confidence 96 8899999999999999999999999999999 889999999999999999999999999998 99999999999999
Q ss_pred HHHHHHhc
Q 037666 161 LHVLARKN 168 (375)
Q Consensus 161 Lh~A~~~~ 168 (375)
||+|++++
T Consensus 222 L~~A~~~~ 229 (269)
T 4b93_B 222 VDCAEQNS 229 (269)
T ss_dssp GGGSCTTC
T ss_pred HHHHHhCC
Confidence 99998766
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.5e-33 Score=253.44 Aligned_cols=180 Identities=21% Similarity=0.176 Sum_probs=164.3
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhh---HhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCC
Q 037666 15 GQEITNLGNTALHVAAQANCIDFVKELLKMMSTED---LAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDG 91 (375)
Q Consensus 15 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~---~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g 91 (375)
+.. |.+|+||||+|+..|+.+++++|+++ +.+ ++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|
T Consensus 3 ~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g 78 (282)
T 1oy3_D 3 GYV-TEDGDTALHLAVIHQHEPFLDFLLGF--SAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGG 78 (282)
T ss_dssp CCC-CTTCCCHHHHHHHTTCHHHHHHHHHH--HTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTS
T ss_pred Ccc-CCCCCcHHHHHHHcCCHHHHHHHHhc--CCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCC
Confidence 454 89999999999999999999999998 666 8899999999999999999999999999999996 8899999
Q ss_pred ChHHHHHHHcCcHHHHHHHHHhcc------------------------------------------------CCcccchh
Q 037666 92 TLPIVRAAALGQRQTVVLLYEKTK------------------------------------------------GSLTDDEC 123 (375)
Q Consensus 92 ~tpLh~Aa~~g~~~iv~~Ll~~~~------------------------------------------------~~~~d~~g 123 (375)
.||||+|+..|+.+++++|++.++ .+.+|..|
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 999999999999999999998763 23467789
Q ss_pred hHHHHHHHhcCcHHHHHHHHhcCCcccccccCC-CCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhh
Q 037666 124 IELLVKLIETDLYAVALRLLKDRPQLATKRDRN-EETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTA 200 (375)
Q Consensus 124 ~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~-G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~ 200 (375)
+||||+|+..|+.+++++|+++ |.+++.+|.. |+||||+|++.++. +++++| .+++++.+|..|+||++
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~-------~~v~~Ll~~gad~~~~d~~g~tpL~ 230 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDA-GADLNKPEPTCGRTPLHLAVEAQAA-------SVLELLLKAGADPTARMYGGRTPLG 230 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcCHHHHHHHcCCH-------HHHHHHHHcCCCCcccccCCCCHHH
Confidence 9999999999999999999998 8999999865 99999999999988 888877 78899999999999999
Q ss_pred hhHHHH
Q 037666 201 LFSEKH 206 (375)
Q Consensus 201 ~a~~~~ 206 (375)
+|.+..
T Consensus 231 ~A~~~~ 236 (282)
T 1oy3_D 231 SALLRP 236 (282)
T ss_dssp HHHTSS
T ss_pred HHHHcC
Confidence 987653
No 15
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.5e-33 Score=233.38 Aligned_cols=156 Identities=23% Similarity=0.238 Sum_probs=144.4
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCc
Q 037666 24 TALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQ 103 (375)
Q Consensus 24 tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~ 103 (375)
++|+.||+.|+.++|+.|+++ ++++|.+|.+|+||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~--Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN--GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCC
Confidence 479999999999999999999 8999999999999999999999999999999999996 8899999999999999999
Q ss_pred HHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhc
Q 037666 104 RQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENV 182 (375)
Q Consensus 104 ~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~ 182 (375)
.+++++|++.++ ++.+|.+|+||||+|+++|+.++++.|+++ |.+++.+|.+|+||||+|++.++. +++++
T Consensus 83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~g~~-------~iv~~ 154 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNTSDSDGRTPLDLAREHGNE-------EVVKL 154 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHH
T ss_pred HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCH-------HHHHH
Confidence 999999999999 899999999999999999999999999998 999999999999999999999988 88888
Q ss_pred c--chhhHhh
Q 037666 183 V--PKKLAEA 190 (375)
Q Consensus 183 L--~~~~~~~ 190 (375)
| +|++++.
T Consensus 155 Ll~~GA~ie~ 164 (169)
T 4gpm_A 155 LEKQGGWLEH 164 (169)
T ss_dssp HHTC------
T ss_pred HHHCCCCcCC
Confidence 8 6666653
No 16
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=9.3e-33 Score=258.22 Aligned_cols=199 Identities=17% Similarity=0.091 Sum_probs=181.1
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
+++++|.++|++++.. |.+|+||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|++.++
T Consensus 72 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 148 (351)
T 3utm_A 72 RIVQLLLQHGADVHAK-DKGGLVPLHNACSYGHYEVTELLLKH--GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGA 148 (351)
T ss_dssp HHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCcc-CCCCCcHHHHHHHCCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 5678889999999997 99999999999999999999999999 89999999999999999999999999999999988
Q ss_pred CCccc------------------------------------------------------cCCCCChHHHHHHHc---CcH
Q 037666 82 DIAMV------------------------------------------------------PGGDGTLPIVRAAAL---GQR 104 (375)
Q Consensus 82 ~~~~~------------------------------------------------------~d~~g~tpLh~Aa~~---g~~ 104 (375)
+. +. .+..|.||||+|+.. ++.
T Consensus 149 ~~-~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~ 227 (351)
T 3utm_A 149 DP-TLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRK 227 (351)
T ss_dssp CT-TCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHH
T ss_pred CC-ccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHH
Confidence 74 33 345678999999999 668
Q ss_pred HHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666 105 QTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV 183 (375)
Q Consensus 105 ~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L 183 (375)
+++++|++.+. ++.+|.+|+||||+|+++|+.+++++|+++ |.++|.+|..|+||||+|++.++. +++++|
T Consensus 228 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~t~L~~A~~~~~~-------~~v~~L 299 (351)
T 3utm_A 228 QVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKH-GAKMNALDSLGQTALHRAALAGHL-------QTCRLL 299 (351)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCH-------HHHHHH
T ss_pred HHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcH-------HHHHHH
Confidence 99999999998 888999999999999999999999999988 999999999999999999999988 888887
Q ss_pred --chhhHhhhcCCCCChhhhhHHHHHHHHHh
Q 037666 184 --PKKLAEAINTGGLTPTALFSEKHKELKRK 212 (375)
Q Consensus 184 --~~~~~~~~n~~g~tpl~~a~~~~~~l~~~ 212 (375)
.+++++.+|..|+||++++.+...+.+.+
T Consensus 300 l~~gad~~~~~~~g~tal~~a~~~~~~~l~~ 330 (351)
T 3utm_A 300 LSYGSDPSIISLQGFTAAQMGNEAVQQILSE 330 (351)
T ss_dssp HHTTCCTTCCCTTSCCHHHHSCHHHHHHHHH
T ss_pred HHcCCCCCCcCCCCCChhhhhhHHHHHHHHh
Confidence 78899999999999999997766655444
No 17
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-32 Score=248.87 Aligned_cols=199 Identities=21% Similarity=0.160 Sum_probs=176.5
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.+.|.++|.+++...+..|+||||+|+..|+.+++++|+++ +.+++.+|.+|.||||+|+..|+.+++++|++.++
T Consensus 19 ~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 96 (285)
T 1wdy_A 19 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGA 96 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4667788899999887688899999999999999999999999 88999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcc----------cchhhHHHHHHHhcCcHHHHHHHHhcCCccc
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLT----------DDECIELLVKLIETDLYAVALRLLKDRPQLA 150 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~----------d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~ 150 (375)
++ +.+|.+|.||||+|+..|+.+++++|++.+. .+.. +..|.||||.|+..|+.+++++|+++.+.++
T Consensus 97 ~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~ 175 (285)
T 1wdy_A 97 DV-NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV 175 (285)
T ss_dssp CT-TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCT
T ss_pred CC-CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCC
Confidence 86 8889999999999999999999999999988 6554 7789999999999999999999999889999
Q ss_pred ccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 151 TKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 151 ~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
+.+|..|+||||+|+..+..... .++.++| .+++++.+|..|.||+++|.+..
T Consensus 176 ~~~~~~g~t~l~~a~~~~~~~~~---~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 230 (285)
T 1wdy_A 176 NACDNMGRNALIHALLSSDDSDV---EAITHLLLDHGADVNVRGERGKTPLILAVEKK 230 (285)
T ss_dssp TCCCTTSCCHHHHHHHCSCTTTH---HHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTT
T ss_pred CccCCCCCCHHHHHHHccccchH---HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC
Confidence 99999999999999998863100 0566665 67888899999999999987653
No 18
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.7e-33 Score=262.87 Aligned_cols=191 Identities=18% Similarity=0.108 Sum_probs=176.4
Q ss_pred HHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccC---C
Q 037666 5 DIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGN---K 81 (375)
Q Consensus 5 ~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~---~ 81 (375)
+.|.++|+++|.. |.+|.||||+|+..|+.++|++|+++ +++++.+|..|.||||+|+..|+.+++++|++.+ .
T Consensus 150 ~~ll~~ga~vn~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~--ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~ 226 (373)
T 2fo1_E 150 KECIAAGADVNAM-DCDENTPLMLAVLARRRRLVAYLMKA--GADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKG 226 (373)
T ss_dssp HHHHHTCCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHH
T ss_pred HHHHhcCCCCcCC-CCCCCCHHHHHHHcChHHHHHHHHHC--CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 4456899999997 99999999999999999999999999 8999999999999999999999999999999987 5
Q ss_pred CCccccCCCCChHHHHHHHcC---cHHHHHHHHHhcc-CCc--------ccchhhHHHHHHHhcCcHHHHHHHHhcCCcc
Q 037666 82 DIAMVPGGDGTLPIVRAAALG---QRQTVVLLYEKTK-GSL--------TDDECIELLVKLIETDLYAVALRLLKDRPQL 149 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g---~~~iv~~Ll~~~~-~~~--------~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~ 149 (375)
++ +..|.+|.||||+|+..| +.+++++|++.+. ++. .|..|+||||+|+..|+.+++++|+++.+.+
T Consensus 227 ~~-~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 305 (373)
T 2fo1_E 227 DI-EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN 305 (373)
T ss_dssp TT-SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC
T ss_pred Ch-hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC
Confidence 65 788999999999999998 8999999999998 554 5678999999999999999999999986799
Q ss_pred cccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 150 ATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 150 ~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
++.+|.+|+||||+|+..|+. +++++| .+++++.+|.+|+||+++|.+..
T Consensus 306 ~n~~d~~g~TpL~~A~~~g~~-------~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 306 KDKQDEDGKTPIMLAAQEGRI-------EVVMYLIQQGASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp TTCCCTTCCCHHHHHHHHTCH-------HHHHHHHHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred ccCcCCCCCCHHHHHHHcCCH-------HHHHHHHHcCCCccCCCCCCCCHHHHHHHcC
Confidence 999999999999999999988 888887 78899999999999999998754
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.1e-32 Score=242.39 Aligned_cols=182 Identities=20% Similarity=0.199 Sum_probs=170.2
Q ss_pred ccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCC
Q 037666 13 EIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGT 92 (375)
Q Consensus 13 ~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~ 92 (375)
+++.+ |.+|+||||+|+..|+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|++.+.+. +.+|..|.
T Consensus 3 ~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 78 (237)
T 3b7b_A 3 NFKME-HQNKRSPLHAAAEAGHVDICHMLVQA--GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGS 78 (237)
T ss_dssp CCCCS-SCCSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSC
T ss_pred Ccccc-cCCCCCHHHHHHHcCcHHHHHHHHHc--CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCC
Confidence 56666 89999999999999999999999999 8999999999999999999999999999999999986 88899999
Q ss_pred hHHHHHHHcCcHHHHHHHHHhcc--CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCC
Q 037666 93 LPIVRAAALGQRQTVVLLYEKTK--GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLT 170 (375)
Q Consensus 93 tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~ 170 (375)
||||+|+..|+.+++++|++.++ .+..|..|.||||.|+..++.+++++|++. |.+++.+|.+|+||||+|+..++.
T Consensus 79 t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~ 157 (237)
T 3b7b_A 79 TCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINIRDNEENICLHWAAFSGCV 157 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHCCCH
Confidence 99999999999999999999985 777899999999999999999999999998 999999999999999999999987
Q ss_pred CCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 171 SSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 171 ~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
++.++| .+++++.+|..|.||+++|.+..
T Consensus 158 -------~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 188 (237)
T 3b7b_A 158 -------DIAEILLAAKCDLHAVNIHGDSPLHIAAREN 188 (237)
T ss_dssp -------HHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred -------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHhC
Confidence 788877 67889999999999999987653
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.7e-33 Score=250.29 Aligned_cols=182 Identities=15% Similarity=0.143 Sum_probs=136.4
Q ss_pred ccccccCCCCCcHHHHHHHcC-------------CHHHHHHHHHcCChhhHh-chhcCCChHHHHHHHcCcHHHHHHHHc
Q 037666 13 EIGQEITNLGNTALHVAAQAN-------------CIDFVKELLKMMSTEDLA-KKNKIGCTAFFYAAGSGMVEIVEEAMK 78 (375)
Q Consensus 13 ~~~~~~d~~g~tpLh~A~~~g-------------~~~~v~~Ll~~~~~~~~~-~~d~~g~tpLh~Aa~~g~~~iv~~Ll~ 78 (375)
|+|.+ |.+|+||||+|+..| +.+++++|+++ +.+++ ..|.+|+||||+|+..|+.+++++|++
T Consensus 2 dvn~~-d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~--g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 78 (253)
T 1yyh_A 2 DVNVR-GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ--GASLHNQTDRTGETALHLAARYSRSDAAKRLLE 78 (253)
T ss_dssp -----------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCC-CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc--cCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 67887 999999999999987 89999999999 67764 468999999999999999999999999
Q ss_pred cCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc--CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCC
Q 037666 79 GNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK--GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRN 156 (375)
Q Consensus 79 ~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~ 156 (375)
.++++ +.+|.+|.||||+|+..|+.+++++|++.++ .+.+|.+|.||||+|+..++.++++.|++. +.+++.+|.+
T Consensus 79 ~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~ 156 (253)
T 1yyh_A 79 ASADA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDL 156 (253)
T ss_dssp TTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHT-TCCTTCBCTT
T ss_pred cCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCCCcCCC
Confidence 99996 8899999999999999999999999999987 677899999999999999999999999998 9999999999
Q ss_pred CCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 157 EETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 157 G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
|+||||+|+..++. ++.++| .+++++.+|..|.||+++|.+..
T Consensus 157 g~t~L~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~ 201 (253)
T 1yyh_A 157 GKSALHWAAAVNNV-------DAAVVLLKNGANKDMQNNREETPLFLAAREG 201 (253)
T ss_dssp SCBHHHHHHHHTCH-------HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCH-------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHCC
Confidence 99999999999987 788877 77899999999999999997654
No 21
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.2e-32 Score=246.97 Aligned_cols=193 Identities=19% Similarity=0.182 Sum_probs=178.1
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.++|.++|++++.. |.+|.||||+|+..|+.+++++|+++ +.+++.+|..|.||||+|+..|+.+++++|++.+.
T Consensus 53 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 129 (285)
T 1wdy_A 53 DIVELLLRHGADPVLR-KKNGATPFLLAAIAGSVKLLKLFLSK--GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGA 129 (285)
T ss_dssp HHHHHHHHTTCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCC
Confidence 5778899999999987 99999999999999999999999999 89999999999999999999999999999999998
Q ss_pred CCcccc----------CCCCChHHHHHHHcCcHHHHHHHHHh-cc-CCcccchhhHHHHHHHhcCc----HHHHHHHHhc
Q 037666 82 DIAMVP----------GGDGTLPIVRAAALGQRQTVVLLYEK-TK-GSLTDDECIELLVKLIETDL----YAVALRLLKD 145 (375)
Q Consensus 82 ~~~~~~----------d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~-~~~~d~~g~t~Lh~A~~~~~----~~~v~~LL~~ 145 (375)
+. +.+ +..|.||||.|+..|+.+++++|++. +. ++..|..|+||||.|+..++ .++++.|++.
T Consensus 130 ~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~ 208 (285)
T 1wdy_A 130 NV-NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH 208 (285)
T ss_dssp CT-TCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT
T ss_pred Cc-ccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc
Confidence 86 444 78899999999999999999999998 65 78889999999999999999 8999999988
Q ss_pred CCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc---chhhHhhhcCCCCChhhhhHHHH
Q 037666 146 RPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV---PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 146 ~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L---~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
|.+++.+|.+|+||||+|++.++. ++.++| .+.+++.+|.+|+||+++|.+..
T Consensus 209 -g~~~~~~~~~g~t~L~~A~~~~~~-------~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~ 264 (285)
T 1wdy_A 209 -GADVNVRGERGKTPLILAVEKKHL-------GLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264 (285)
T ss_dssp -TCCSSCCCTTSCCHHHHHHHTTCH-------HHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTT
T ss_pred -CCCCCCcCCCCCcHHHHHHHcCCH-------HHHHHHHhccCCCccccCCCCCcHHHHHHHcC
Confidence 999999999999999999999987 777776 46889999999999999998754
No 22
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.4e-32 Score=242.74 Aligned_cols=177 Identities=19% Similarity=0.110 Sum_probs=156.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCc----cccCCCCChHHH
Q 037666 21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIA----MVPGGDGTLPIV 96 (375)
Q Consensus 21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~----~~~d~~g~tpLh 96 (375)
.|+||||+|+..|+.+++++|++.. +.+++.+|.+|+||||+|+..|+.+++++|++.+++.. +.+|.+|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 4899999999999999999999975 78899999999999999999999999999999988742 456778999999
Q ss_pred HHHHcCcHHHHHHHHHhcc-CCcccc-------------hhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHH
Q 037666 97 RAAALGQRQTVVLLYEKTK-GSLTDD-------------ECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALH 162 (375)
Q Consensus 97 ~Aa~~g~~~iv~~Ll~~~~-~~~~d~-------------~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh 162 (375)
+|+..|+.+++++|++.++ .+.++. +|+||||+|+..|+.+++++|+++ |.+++.+|.+|+||||
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~ 159 (232)
T 2rfa_A 81 IAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-GADIRAQDSLGNTVLH 159 (232)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHH
Confidence 9999999999999999988 666544 799999999999999999999998 9999999999999999
Q ss_pred HHHHhcCCCCCCCccchh----hcc--chhhH------hhhcCCCCChhhhhHHHH
Q 037666 163 VLARKNLTSSNQNPCGVE----NVV--PKKLA------EAINTGGLTPTALFSEKH 206 (375)
Q Consensus 163 ~A~~~~~~~~~~~~~~v~----~~L--~~~~~------~~~n~~g~tpl~~a~~~~ 206 (375)
+|+..++. ++. ++| .+++. +.+|..|+||+++|.+..
T Consensus 160 ~A~~~~~~-------~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 160 ILILQPNK-------TFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp HHHTCSCH-------HHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred HHHHcCCh-------HHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 99999876 555 555 44544 588999999999998764
No 23
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.2e-32 Score=251.45 Aligned_cols=187 Identities=14% Similarity=0.040 Sum_probs=169.7
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
+++++|.+. +++.+ |.+|+||||+|+..|+.+++++|+++ +.+++..| |+||||+|+..|+.+++++|++.++
T Consensus 14 ~v~~lL~~~--~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga 86 (285)
T 3kea_A 14 QLKSFLSSK--DTFKA-DVHGHSASYYAIADNNVRLVCTLLNA--GALKNLLE--NEFPLHQAATLEDTKIVKILLFSGL 86 (285)
T ss_dssp HHHHHHHST--TTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTC
T ss_pred HHHHHHHhC--CCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 578888876 46776 99999999999999999999999999 88888874 9999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchh-hHHHHHHHhcCcHHHHHHHHhcCCcccccccC-CCC
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDEC-IELLVKLIETDLYAVALRLLKDRPQLATKRDR-NEE 158 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g-~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~-~G~ 158 (375)
++ +.+|..|.||||+|+..|+.+++++|+++++ ++.+|..| +||||+|+..|+.+++++|+++ +.+. .|. +|+
T Consensus 87 ~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-g~~~--~~~~~g~ 162 (285)
T 3kea_A 87 DD-SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPST--FDLAILL 162 (285)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTT-SCTT--CCCSTHH
T ss_pred CC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCcc--ccccCCc
Confidence 96 8899999999999999999999999999998 88889998 8999999999999999999998 5444 333 899
Q ss_pred cHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCCh-hhhhHHHH
Q 037666 159 TALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTP-TALFSEKH 206 (375)
Q Consensus 159 T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tp-l~~a~~~~ 206 (375)
||||+|+..++. ++.++| .+++++.+|..|+|| +++|.+..
T Consensus 163 t~L~~A~~~g~~-------~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~ 206 (285)
T 3kea_A 163 SCIHITIKNGHV-------DMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK 206 (285)
T ss_dssp HHHHHHHHTTCH-------HHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHT
T ss_pred cHHHHHHHcChH-------HHHHHHHHcCCCCCcccCCCCChHHHHHHHcC
Confidence 999999999988 888877 789999999999998 99988654
No 24
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.98 E-value=1.3e-32 Score=259.61 Aligned_cols=191 Identities=15% Similarity=0.077 Sum_probs=171.0
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHcc--
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG-- 79 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-- 79 (375)
+++++|.++|++++.. |..|+||||+|+..|+.++|++|+++ +.+ ..+.+|.||||+|+..|+.+++++|++.
T Consensus 34 ~~v~~Ll~~g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~ 108 (364)
T 3ljn_A 34 DEVRRLIETGVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASV--GEV--HSLWHGQKPIHLAVMANKTDLVVALVEGAK 108 (364)
T ss_dssp HHHHHHHHTTCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHH--CCC--CCCBTTBCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHC--CCC--ccccCCCCHHHHHHHcCCHHHHHHHHHhcc
Confidence 4677888899999987 99999999999999999999999999 553 3345799999999999999999999998
Q ss_pred --CCCCccc-----------------cCCCCChHHHHHHHcC--cHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHH
Q 037666 80 --NKDIAMV-----------------PGGDGTLPIVRAAALG--QRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYA 137 (375)
Q Consensus 80 --~~~~~~~-----------------~d~~g~tpLh~Aa~~g--~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~ 137 (375)
+.+. +. +|.+|.||||+|+..| +.+++++|++.+. ++.+|..|+||||+|+..|+.+
T Consensus 109 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~ 187 (364)
T 3ljn_A 109 ERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNRE 187 (364)
T ss_dssp HHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred ccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHH
Confidence 6553 44 7889999999999999 9999999999998 8889999999999999999999
Q ss_pred HHHHHHhcCCcc-----cccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 138 VALRLLKDRPQL-----ATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 138 ~v~~LL~~~~~~-----~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
++++|++. +.+ +|.+|.+|+||||+|+..++. +++++| .+++++.+|.+|.||+++|.+..
T Consensus 188 ~v~~Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~~g~~-------~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g 255 (364)
T 3ljn_A 188 ALDLMMDT-VPSKSSLRLDYANKQGNSHLHWAILINWE-------DVAMRFVEMGIDVNMEDNEHTVPLYLSVRAA 255 (364)
T ss_dssp HHHHHHHH-CSCSSSCCTTCCCTTCCCTTHHHHTTTCH-------HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTC
T ss_pred HHHHHHhc-ccccccccccccCCCCCcHHHHHHHcCCH-------HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhC
Confidence 99999998 666 999999999999999999988 888877 78899999999999999998764
No 25
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.98 E-value=2.6e-32 Score=263.82 Aligned_cols=190 Identities=22% Similarity=0.215 Sum_probs=108.9
Q ss_pred HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666 3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD 82 (375)
Q Consensus 3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 82 (375)
+.++|.++|++++.. |..|.||||+|+..|+.+++++|+++ +.+++..+.+|.||||+|+..|+.++++.|++.+.+
T Consensus 161 ~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 237 (437)
T 1n11_A 161 VAELLLERDAHPNAA-GKNGLTPLHVAVHHNNLDIVKLLLPR--GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS 237 (437)
T ss_dssp HHHHHHHTTCCTTCC-CSSCCCHHHHHHHTTCHHHHHHHGGG--TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHhCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 455555666666654 55666666666666666666666665 455555555555666666666666666655555555
Q ss_pred CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHH
Q 037666 83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETAL 161 (375)
Q Consensus 83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~L 161 (375)
. +.+|..|.||||+|+..|+.+++++|+++++ .+..|..|+||||+|++.|+.+++++|+++ +.+++.+|..|+|||
T Consensus 238 ~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L 315 (437)
T 1n11_A 238 A-NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKH-GVMVDATTRMGYTPL 315 (437)
T ss_dssp T-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCSSCCCHH
T ss_pred C-CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CccCCCCCCCCCCHH
Confidence 3 4555555555555555555555555555555 455555555555555555555555555555 555555555555555
Q ss_pred HHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHH
Q 037666 162 HVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSE 204 (375)
Q Consensus 162 h~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~ 204 (375)
|+|+..++. +++++| .+++++.+|..|.||+++|.+
T Consensus 316 ~~A~~~g~~-------~~v~~Ll~~gad~n~~~~~g~t~L~~A~~ 353 (437)
T 1n11_A 316 HVASHYGNI-------KLVKFLLQHQADVNAKTKLGYSPLHQAAQ 353 (437)
T ss_dssp HHHHHSSCS-------HHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHcCcH-------HHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Confidence 555555554 444444 445555555555555555544
No 26
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=6.3e-32 Score=233.18 Aligned_cols=184 Identities=17% Similarity=0.089 Sum_probs=162.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
+..+.||||.|+..|+.+.++.|++.. +.+++..|.+|+||||+|++.|+.+++++|++.++++ +.+|..|.||||+|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A 79 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYA 79 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 457899999999999999999999985 5589999999999999999999999999999999996 88999999999999
Q ss_pred HHcCcHHHHHHHHHhcc--CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCc
Q 037666 99 AALGQRQTVVLLYEKTK--GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNP 176 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~ 176 (375)
+..|+.+++++|++.+. .+..|..|.||||.|+..++.+++++|+++.+.+++.+|.+|+||||+|+..+..... +
T Consensus 80 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~--~ 157 (201)
T 3hra_A 80 GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL--Y 157 (201)
T ss_dssp HHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHH--H
T ss_pred HHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhh--H
Confidence 99999999999996665 7778999999999999999999999999995599999999999999999988761000 0
Q ss_pred cchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 177 CGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 177 ~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
.++.++| .+++++.+|.+|+||+++|.+..
T Consensus 158 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 189 (201)
T 3hra_A 158 QDIVKLLMENGADQSIKDNSGRTAMDYANQKG 189 (201)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCccCCCCCCHHHHHHHcC
Confidence 1677776 77899999999999999988764
No 27
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.98 E-value=5.3e-32 Score=243.93 Aligned_cols=188 Identities=15% Similarity=0.051 Sum_probs=169.4
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.++|.++|++++.. |.+|+||||+|+..|+.+++++|+++ +.+++. +.+|.||||+|+..|+.++++.|++.++
T Consensus 50 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 125 (261)
T 2xai_A 50 SCVKILLKHGAQVNGV-TADWHTPLFNACVSGSWDCVNLLLQH--GASVQP-ESDLASPIHEAARRGHVECVNSLIAYGG 125 (261)
T ss_dssp HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 5678889999999997 99999999999999999999999999 777764 4569999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
++ +.+|.+|.||||+|+..|+.+++++|++.++ ++ .|.+|+||||+|++.++.++++.|++. |.+++.+|.+|+||
T Consensus 126 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tp 202 (261)
T 2xai_A 126 NI-DHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVARTASEELACLLMDF-GADTQAKNAEGKRP 202 (261)
T ss_dssp CT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT-CCBTTBCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCG
T ss_pred CC-CcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC-CCCCCCChHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCh
Confidence 96 8899999999999999999999999999998 66 488999999999999999999999998 99999999999999
Q ss_pred HHHHHHhcCCCCCCCccchhhcc----------chhhHhhhcCCCCChhhhhHHH
Q 037666 161 LHVLARKNLTSSNQNPCGVENVV----------PKKLAEAINTGGLTPTALFSEK 205 (375)
Q Consensus 161 Lh~A~~~~~~~~~~~~~~v~~~L----------~~~~~~~~n~~g~tpl~~a~~~ 205 (375)
||+|+..+ ++.+++ +.++.+.+|..|+||++.+.+.
T Consensus 203 l~~A~~~~---------~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~ 248 (261)
T 2xai_A 203 VELVPPES---------PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKL 248 (261)
T ss_dssp GGGSCTTC---------THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGS
T ss_pred hhhccccc---------cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCccc
Confidence 99999654 455554 2257788999999999987653
No 28
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=8.1e-33 Score=257.65 Aligned_cols=186 Identities=14% Similarity=0.152 Sum_probs=158.2
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCc---HHHHHHHHc
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGM---VEIVEEAMK 78 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~---~~iv~~Ll~ 78 (375)
+++++|.+.|+++|...|.+|+||||+|+..|+.++|++|+++ +++++.+|.+|+||||+|+..|+ .++++.|++
T Consensus 111 ~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~--Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~ 188 (327)
T 1sw6_A 111 EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKH--GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLD 188 (327)
T ss_dssp HHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHH
T ss_pred HHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHH
Confidence 5778899999999993399999999999999999999999999 89999999999999999999999 688888888
Q ss_pred cCCCCccccCCCCChHHHHHHH----cCcHHHHHHHHHh--------------------cc-CCcccchhhHHHHHHHhc
Q 037666 79 GNKDIAMVPGGDGTLPIVRAAA----LGQRQTVVLLYEK--------------------TK-GSLTDDECIELLVKLIET 133 (375)
Q Consensus 79 ~~~~~~~~~d~~g~tpLh~Aa~----~g~~~iv~~Ll~~--------------------~~-~~~~d~~g~t~Lh~A~~~ 133 (375)
.+....+.+|.+|+||||+|+. .|+.+++++|++. +. ++.+|..|.||||.|+.
T Consensus 189 ~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~- 267 (327)
T 1sw6_A 189 YLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD- 267 (327)
T ss_dssp HHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS-
T ss_pred hhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH-
Confidence 7633248899999999999999 8999999999987 44 67788999999999996
Q ss_pred CcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666 134 DLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK 205 (375)
Q Consensus 134 ~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~ 205 (375)
+++|++. ++|.+|.+|+||||+|++.++. +++++| .+++++.+|.+|+||+++|++.
T Consensus 268 -----~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~-------~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 268 -----LKWIIAN---MLNAQDSNGDTCLNIAARLGNI-------SIVDALLDYGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp -----HHHHHHH---TTTCCCTTSCCHHHHHHHHCCH-------HHHHHHHHTTCCTTCCCTTSCCGGGGTCC-
T ss_pred -----HHHHHHh---CCCCCCCCCCCHHHHHHHcCCH-------HHHHHHHHcCCCCcccCCCCCCHHHHHHhc
Confidence 7788877 5899999999999999999988 888887 7899999999999999998653
No 29
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.2e-31 Score=237.77 Aligned_cols=181 Identities=14% Similarity=0.108 Sum_probs=163.4
Q ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHc---CChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCC
Q 037666 15 GQEITNLGNTALHVAAQANCIDFVKELLKM---MSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDG 91 (375)
Q Consensus 15 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~---~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g 91 (375)
+.+ |.+|+||||+|+..|+.+++++|++. . +.+++.+|..|+||||+|+..|+.+++++|++.+.+. +.+|.+|
T Consensus 3 ~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g 79 (241)
T 1k1a_A 3 TRA-DEDGDTPLHIAVVQGNLPAVHRLVNLFQQG-GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHG 79 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTS
T ss_pred ccc-CCCCCcHHHHHHHcCCHHHHHHHHHHHHhc-CCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCC
Confidence 444 89999999999999999999999982 2 7789999999999999999999999999999999986 8889999
Q ss_pred ChHHHHHHHcCcHHHHHHHHHhcc-----CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCccccccc-CCCCcHHHHHH
Q 037666 92 TLPIVRAAALGQRQTVVLLYEKTK-----GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRD-RNEETALHVLA 165 (375)
Q Consensus 92 ~tpLh~Aa~~g~~~iv~~Ll~~~~-----~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d-~~G~T~Lh~A~ 165 (375)
.||||+|+..|+.+++++|++.++ .+..|..|.||||.|+..++.+++++|++. +.+++.+| ..|+||||+|+
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~g~t~L~~A~ 158 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER-GADIDAVDIKSGRSPLIHAV 158 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc-CCCcccccccCCCcHHHHHH
Confidence 999999999999999999999985 445788999999999999999999999998 88999988 89999999999
Q ss_pred HhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 166 RKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 166 ~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
+.++. ++.++| .+++++.+|.+|.||+++|....
T Consensus 159 ~~~~~-------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 159 ENNSL-------SMVQLLLQHGANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp HTTCH-------HHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT
T ss_pred HcCCH-------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 99987 788877 67889999999999999987653
No 30
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=1.6e-31 Score=236.04 Aligned_cols=170 Identities=20% Similarity=0.140 Sum_probs=151.6
Q ss_pred HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhH-----hchhcCCChHHHHHHHcCcHHHHHHHH
Q 037666 3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDL-----AKKNKIGCTAFFYAAGSGMVEIVEEAM 77 (375)
Q Consensus 3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~-----~~~d~~g~tpLh~Aa~~g~~~iv~~Ll 77 (375)
++.+|...|.+++.. |.+|+||||+|+..|+.+++++|+++ +.++ +..|.+|+||||+|+..|+.+++++|+
T Consensus 19 v~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 95 (232)
T 2rfa_A 19 LSKLLKFEGCEVHQR-GAMGETALHIAALYDNLEAAMVLMEA--APELVFEPMTSELYEGQTALHIAVINQNVNLVRALL 95 (232)
T ss_dssp HHHHHTTTCSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHH--CGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHc--CchhccccccccCCCCcCHHHHHHHcCCHHHHHHHH
Confidence 344444459999998 99999999999999999999999999 6665 667889999999999999999999999
Q ss_pred ccCCCCccccCC-------------CCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHH----
Q 037666 78 KGNKDIAMVPGG-------------DGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVA---- 139 (375)
Q Consensus 78 ~~~~~~~~~~d~-------------~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v---- 139 (375)
+.+++. +.++. +|.||||+|+..|+.+++++|+++++ ++.+|.+|+||||+|+.+++.+++
T Consensus 96 ~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~ 174 (232)
T 2rfa_A 96 ARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMY 174 (232)
T ss_dssp HTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHH
T ss_pred hCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHH
Confidence 999886 55544 79999999999999999999999998 888999999999999999999988
Q ss_pred HHHHhcCCccc------ccccCCCCcHHHHHHHhcCCCCCCCccchhhccc
Q 037666 140 LRLLKDRPQLA------TKRDRNEETALHVLARKNLTSSNQNPCGVENVVP 184 (375)
Q Consensus 140 ~~LL~~~~~~~------~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~ 184 (375)
+.|++. +.+. +.+|.+|+||||+|++.++. ++.++|.
T Consensus 175 ~~Ll~~-g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~-------~~v~~Ll 217 (232)
T 2rfa_A 175 NLLLSY-DGGDHLKSLELVPNNQGLTPFKLAGVEGNI-------VMFQHLM 217 (232)
T ss_dssp HHHHHT-TCSCSSCCGGGCCCTTSCCHHHHHHHHTCH-------HHHHHHH
T ss_pred HHHHhc-CCchhhhhhhccCCCCCCCHHHHHHHcCCH-------HHHHHHH
Confidence 888877 6655 68999999999999999988 8888873
No 31
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.3e-31 Score=231.13 Aligned_cols=171 Identities=21% Similarity=0.284 Sum_probs=156.9
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
.++++|.+.+.+++.. |.+|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 20 ~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~ 96 (201)
T 3hra_A 20 KVKEILQDTTYQVDEV-DTEGNTPLNIAVHNNDIEIAKALIDR--GADINLQNSISDSPYLYAGAQGRTEILAYMLKHAT 96 (201)
T ss_dssp HHHHHHTCTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred HHHHHHHcCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 4667777777799987 99999999999999999999999999 89999999999999999999999999999996554
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhc-c-CCcccchhhHHHHHHHhcCc-----HHHHHHHHhcCCccccccc
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKT-K-GSLTDDECIELLVKLIETDL-----YAVALRLLKDRPQLATKRD 154 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~-~-~~~~d~~g~t~Lh~A~~~~~-----~~~v~~LL~~~~~~~~~~d 154 (375)
...+.+|..|.||||+|+..|+.+++++|++.+ . .+.+|..|+||||+|+..++ .+++++|+++ |.+++.+|
T Consensus 97 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~ 175 (201)
T 3hra_A 97 PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN-GADQSIKD 175 (201)
T ss_dssp CCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT-TCCTTCCC
T ss_pred cccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC-CCCCCccC
Confidence 334889999999999999999999999999999 4 78899999999999999887 9999999998 99999999
Q ss_pred CCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666 155 RNEETALHVLARKNLTSSNQNPCGVENVV 183 (375)
Q Consensus 155 ~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L 183 (375)
.+|+||||+|++.++. ++.++|
T Consensus 176 ~~g~t~l~~A~~~~~~-------~~~~~L 197 (201)
T 3hra_A 176 NSGRTAMDYANQKGYT-------EISKIL 197 (201)
T ss_dssp TTSCCHHHHHHHHTCH-------HHHHHH
T ss_pred CCCCCHHHHHHHcCCH-------hHHHHH
Confidence 9999999999999988 777766
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=2e-31 Score=234.53 Aligned_cols=176 Identities=18% Similarity=0.184 Sum_probs=159.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccC--CCCccccCCCCChHHHHHH
Q 037666 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGN--KDIAMVPGGDGTLPIVRAA 99 (375)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~--~~~~~~~d~~g~tpLh~Aa 99 (375)
|+||||+|+..|+.+++++|++.. +...+..|.+|+||||+|+..|+.+++++|++.+ ++....+|..|.||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSK-PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHC-GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcC-ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHH
Confidence 789999999999999999999994 4445568999999999999999999999999999 5653338899999999999
Q ss_pred HcCcHHHHHHHHHhc--c-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCc
Q 037666 100 ALGQRQTVVLLYEKT--K-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNP 176 (375)
Q Consensus 100 ~~g~~~iv~~Ll~~~--~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~ 176 (375)
..|+.+++++|++.+ + .+..|.+|.||||.|+..++.+++++|+++ |.+++.+|.+|+||||+|++.++.
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~------ 153 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASVGSL------ 153 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCH------
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCH------
Confidence 999999999999998 4 677899999999999999999999999998 999999999999999999999987
Q ss_pred cchhhcc--ch-hhHhhhcCCCCChhhhhHHHH
Q 037666 177 CGVENVV--PK-KLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 177 ~~v~~~L--~~-~~~~~~n~~g~tpl~~a~~~~ 206 (375)
++.++| .+ .+++.+|.+|.||+++|.+..
T Consensus 154 -~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~ 185 (228)
T 2dzn_A 154 -KLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185 (228)
T ss_dssp -HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT
T ss_pred -HHHHHHHhcCcccccCcCCCCCCHHHHHHHcC
Confidence 788877 55 788999999999999987654
No 33
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=2.3e-31 Score=257.19 Aligned_cols=191 Identities=20% Similarity=0.158 Sum_probs=125.3
Q ss_pred HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666 3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD 82 (375)
Q Consensus 3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 82 (375)
+++.|.+++.+.+.. +..|.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|++.+.+
T Consensus 128 ~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 204 (437)
T 1n11_A 128 TVLALLEKEASQACM-TKKGFTPLHVAAKYGKVRVAELLLER--DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS 204 (437)
T ss_dssp HHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC
T ss_pred HHHHHHhCCCCCcCC-CCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 445555566666554 66666666666666666666666666 566666666666666666666666666666666666
Q ss_pred CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHH
Q 037666 83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETAL 161 (375)
Q Consensus 83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~L 161 (375)
. +.++.+|.||||+|+..|+.+++++|++.+. .+..+..|.||||.|+..|+.+++++|+++ +.+++.+|..|+|||
T Consensus 205 ~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L 282 (437)
T 1n11_A 205 P-HSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSK-QANGNLGNKSGLTPL 282 (437)
T ss_dssp S-CCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTCCCHH
T ss_pred C-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhc-CCCCCCCCCCCCCHH
Confidence 4 5566666666666666666666666666666 555666666666666666666666666665 666666666666666
Q ss_pred HHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666 162 HVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK 205 (375)
Q Consensus 162 h~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~ 205 (375)
|+|++.++. ++.++| .+.+++.+|..|.||+++|...
T Consensus 283 ~~A~~~~~~-------~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 321 (437)
T 1n11_A 283 HLVAQEGHV-------PVADVLIKHGVMVDATTRMGYTPLHVASHY 321 (437)
T ss_dssp HHHHHHTCH-------HHHHHHHHHTCCTTCCCSSCCCHHHHHHHS
T ss_pred HHHHHcCCH-------HHHHHHHhCCccCCCCCCCCCCHHHHHHHc
Confidence 666666655 555555 4556666666666666666543
No 34
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=2.2e-31 Score=235.52 Aligned_cols=193 Identities=22% Similarity=0.177 Sum_probs=169.3
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchh-cCCChHHHHHHHcCcHHHHHHHHccC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKN-KIGCTAFFYAAGSGMVEIVEEAMKGN 80 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d-~~g~tpLh~Aa~~g~~~iv~~Ll~~~ 80 (375)
++.+.|.+.|.+++.. |..|.||||+|+..|+.+++++|+++ +.+++..+ ..|.||||+|+..|+.++++.|++.+
T Consensus 23 ~~~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g 99 (240)
T 3eu9_A 23 ERCRELVEAGYDVRQP-DKENVTLLHWAAINNRIDLVKYYISK--GAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYG 99 (240)
T ss_dssp HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCcCCC-CCCCCCHHHHHHHhCCHHHHHHHHHc--CCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcC
Confidence 4567788899999887 89999999999999999999999999 66666444 55999999999999999999999999
Q ss_pred CCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCc-HHHHHHHHhcCCcccccccC-CC
Q 037666 81 KDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDL-YAVALRLLKDRPQLATKRDR-NE 157 (375)
Q Consensus 81 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~-~~~v~~LL~~~~~~~~~~d~-~G 157 (375)
.+. +.+|..|.||||.|+..|+.+++++|++.+. ++..|.+|.||||.|+..++ .++++.|++. +.+++.++. +|
T Consensus 100 ~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~-~~~~~~~~~~~g 177 (240)
T 3eu9_A 100 ADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF-NVSVNLGDKYHK 177 (240)
T ss_dssp CCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT-TCCTTCCCTTTC
T ss_pred CCC-cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhc-CCCcchhhccCC
Confidence 886 7889999999999999999999999999988 88889999999999997666 6777777776 888998887 89
Q ss_pred CcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 158 ETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 158 ~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
+||||+|++.+.. ++.++| .+++++.+|..|+||+++|.+..
T Consensus 178 ~t~L~~A~~~~~~-------~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 221 (240)
T 3eu9_A 178 NTALHWAVLAGNT-------TVISLLLEAGANVDAQNIKGESALDLAKQRK 221 (240)
T ss_dssp CCHHHHHHHHTCH-------HHHHHHHHHTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CcHHHHHHHcCCH-------HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 9999999999987 788777 67889999999999999988764
No 35
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.7e-31 Score=242.55 Aligned_cols=179 Identities=11% Similarity=0.037 Sum_probs=163.7
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCCh
Q 037666 14 IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTL 93 (375)
Q Consensus 14 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t 93 (375)
++.. |.+|+||||+|+..|+.+++++|++. +.+++.+|.+|+||||+|+..|+.+++++|++.++++ +.+|.+|.|
T Consensus 52 ~~~~-~~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t 127 (285)
T 3d9h_A 52 LMGD-AVSDWSPMHEAAIHGHQLSLRNLISQ--GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHT 127 (285)
T ss_dssp TCSS-SCCSCCHHHHHHHTTCHHHHHHHHHT--TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCC
T ss_pred ccCC-CccCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCC
Confidence 3444 88999999999999999999999999 8899999999999999999999999999999999996 889999999
Q ss_pred HHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCC
Q 037666 94 PIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSS 172 (375)
Q Consensus 94 pLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~ 172 (375)
|||+|+..|+.+++++|++.++ .+. +.+|.||||+|+..|+.+++++|++. +.+++.+|.+|+||||+|+..++.
T Consensus 128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~-- 203 (285)
T 3d9h_A 128 PLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTPLYLACENQQR-- 203 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHT-TCCTTCCBTTTBCHHHHHHHTTCH--
T ss_pred HHHHHHHcCHHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcH--
Confidence 9999999999999999999988 443 45599999999999999999999998 899999999999999999999988
Q ss_pred CCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 173 NQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 173 ~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
+++++| .+++++. |..|.||+++|.+..
T Consensus 204 -----~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 204 -----ACVKKLLESGADVNQ-GKGQDSPLHAVVRTA 233 (285)
T ss_dssp -----HHHHHHHHTTCCTTC-CBTTBCHHHHHHHTT
T ss_pred -----HHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC
Confidence 788877 5677774 889999999987654
No 36
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=2.2e-31 Score=234.86 Aligned_cols=173 Identities=21% Similarity=0.194 Sum_probs=162.8
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.++|.++|.+++.. |..|+||||+|+..|+.+++++|+++ +.+++.+|..|.||||+|+..|+.+++++|++.+.
T Consensus 54 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 130 (231)
T 3aji_A 54 EIVEFLLQLGVPVNDK-DDAGWSPLHIAASAGXDEIVKALLVK--GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA 130 (231)
T ss_dssp HHHHHHHHTTCCSCCC-CTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCCc-CCCCCCHHHHHHHcCHHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4678888999999987 99999999999999999999999999 89999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
+. +.+|..|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+..++.+++++|+++ |.+++.+|.+|+||
T Consensus 131 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~ 208 (231)
T 3aji_A 131 NP-DAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ-GASIYIENKEEKTP 208 (231)
T ss_dssp CT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCH
T ss_pred CC-CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCH
Confidence 86 8899999999999999999999999999998 888999999999999999999999999998 99999999999999
Q ss_pred HHHHHHhcCCCCCCCccchhhccchh
Q 037666 161 LHVLARKNLTSSNQNPCGVENVVPKK 186 (375)
Q Consensus 161 Lh~A~~~~~~~~~~~~~~v~~~L~~~ 186 (375)
||+|++.+.. ++.++|.+.
T Consensus 209 l~~A~~~~~~-------~i~~lL~~~ 227 (231)
T 3aji_A 209 LQVAKGGLGL-------ILKRLAEGE 227 (231)
T ss_dssp HHHSCHHHHH-------HHHHHHHHH
T ss_pred HHHHHhhHHH-------HHHHHHccc
Confidence 9999988877 888887543
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=8e-33 Score=245.26 Aligned_cols=178 Identities=17% Similarity=0.123 Sum_probs=138.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCC--hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMS--TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIV 96 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~--~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh 96 (375)
|.+|+||||+|+..|+.+++++|++... +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~ 83 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLH 83 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHH
Confidence 7788888888888888888888887631 1257778888888888888888888888888888775 777888888888
Q ss_pred HHHHcCcHHHHHHHHHhcc-------CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccC-CCCcHHHHHHHhc
Q 037666 97 RAAALGQRQTVVLLYEKTK-------GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDR-NEETALHVLARKN 168 (375)
Q Consensus 97 ~Aa~~g~~~iv~~Ll~~~~-------~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~-~G~T~Lh~A~~~~ 168 (375)
+|+..|+.+++++|++.++ .+..|..|.||||+|+..|+.+++++|+++ |.+++.+|. +|+||||+|+..+
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL-GADVNAQEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCHHHHHHHcC
Confidence 8888888888888888764 234667788888888888888888888887 788888887 8888888888887
Q ss_pred CCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHH
Q 037666 169 LTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEK 205 (375)
Q Consensus 169 ~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~ 205 (375)
+. +++++| .+++++.+|..|+||+++|.+.
T Consensus 163 ~~-------~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 163 NP-------DLVSLLLKCGADVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp CH-------HHHHHHHTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred CH-------HHHHHHHHcCCCCCcccCCCCCHHHHHHcc
Confidence 76 677766 6677888888888888887654
No 38
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2.9e-31 Score=223.58 Aligned_cols=167 Identities=18% Similarity=0.122 Sum_probs=149.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHc
Q 037666 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAAL 101 (375)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~ 101 (375)
+.||||.|+..|+.++++.|++.. +..++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKG-DNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTC-SGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcC-cccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHC
Confidence 578999999999999999999995 5558999999999999999999999999999999996 88999999999999999
Q ss_pred CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchh
Q 037666 102 GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVE 180 (375)
Q Consensus 102 g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~ 180 (375)
|+.+++++|++.+. ++.+|.+|+||||+|+..++.+++++|+++ |.+++.+|.+|+||||+|++.++. ++.
T Consensus 80 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~-------~~~ 151 (172)
T 3v30_A 80 GYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR-GADLTTEADSGYTPMDLAVALGYR-------KVQ 151 (172)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCH-------HHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHhCcH-------HHH
Confidence 99999999999998 888999999999999999999999999998 999999999999999999999988 888
Q ss_pred hcc--chhhHhhhcCCCCCh
Q 037666 181 NVV--PKKLAEAINTGGLTP 198 (375)
Q Consensus 181 ~~L--~~~~~~~~n~~g~tp 198 (375)
++| ++.+...+|..|.||
T Consensus 152 ~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 152 QVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHHHHHSCC-------
T ss_pred HHHHHHHHHHhcccCCCCCC
Confidence 888 667777888888887
No 39
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=4.4e-31 Score=222.14 Aligned_cols=146 Identities=24% Similarity=0.219 Sum_probs=135.0
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++++.|+++|+++|.+ |.+|+||||+|+..|+.++++.|++. +.+++.+|.+|+||||+|++.|+.+++++|++.++
T Consensus 18 ~~v~~Ll~~Gadvn~~-d~~g~t~l~~a~~~~~~~~~~~ll~~--gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 94 (169)
T 4gpm_A 18 DRVKDLIENGADVNAS-DSDGRTPLHHAAENGHKEVVKLLISK--GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA 94 (169)
T ss_dssp HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhc--ccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcC
Confidence 5678888899999998 99999999999999999999999999 89999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCccccc
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATK 152 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~ 152 (375)
++ +.+|.+|+||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+++|+.+++++|+++ |++++.
T Consensus 95 dv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~-GA~ie~ 164 (169)
T 4gpm_A 95 DV-NAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ-GGWLEH 164 (169)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-------
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCC
Confidence 96 8999999999999999999999999999999 889999999999999999999999999988 887754
No 40
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=1e-31 Score=241.03 Aligned_cols=177 Identities=20% Similarity=0.128 Sum_probs=155.1
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHcCChhhHhc----hhcCCChHHHHHHHc---CcHHHHHHHHccCCCCcc----
Q 037666 21 LGNTALHVAAQANCID----FVKELLKMMSTEDLAK----KNKIGCTAFFYAAGS---GMVEIVEEAMKGNKDIAM---- 85 (375)
Q Consensus 21 ~g~tpLh~A~~~g~~~----~v~~Ll~~~~~~~~~~----~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~---- 85 (375)
.|+||||.|+..|+.+ ++++|++. +.+++. +|.+|+||||+|+.. |+.+++++|++.+++...
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~--g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 78 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWN--SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPL 78 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHc--CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhh
Confidence 4899999999999997 55667777 788888 899999999999999 999999999998876421
Q ss_pred ------ccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccch-------------hhHHHHHHHhcCcHHHHHHHHhc
Q 037666 86 ------VPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDE-------------CIELLVKLIETDLYAVALRLLKD 145 (375)
Q Consensus 86 ------~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~-------------g~t~Lh~A~~~~~~~~v~~LL~~ 145 (375)
.+|.+|.||||+|+..|+.+++++|++.++ ++.+|.. |+||||+|+..|+.+++++|+++
T Consensus 79 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 158 (256)
T 2etb_A 79 VNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN 158 (256)
T ss_dssp GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 234779999999999999999999999998 7777765 99999999999999999999994
Q ss_pred --CCcccccccCCCCcHHHHHHHh--cCCCCCCCccc-------hhhcc--chhhH-------hhhcCCCCChhhhhHHH
Q 037666 146 --RPQLATKRDRNEETALHVLARK--NLTSSNQNPCG-------VENVV--PKKLA-------EAINTGGLTPTALFSEK 205 (375)
Q Consensus 146 --~~~~~~~~d~~G~T~Lh~A~~~--~~~~~~~~~~~-------v~~~L--~~~~~-------~~~n~~g~tpl~~a~~~ 205 (375)
.|.++|.+|.+|+||||+|+.. +.. + +.++| .++++ +.+|.+|+||+++|.+.
T Consensus 159 ~~~ga~~n~~d~~g~TpLh~A~~~~~~~~-------~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 231 (256)
T 2etb_A 159 PHQPASLEATDSLGNTVLHALVMIADNSP-------ENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKE 231 (256)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSCH-------HHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred cccCCCcCccCCCCCCHHHHHHHcccCCc-------hhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHh
Confidence 4999999999999999999994 433 4 77777 67888 88999999999999876
Q ss_pred H
Q 037666 206 H 206 (375)
Q Consensus 206 ~ 206 (375)
.
T Consensus 232 g 232 (256)
T 2etb_A 232 G 232 (256)
T ss_dssp T
T ss_pred C
Confidence 4
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=2e-32 Score=242.71 Aligned_cols=183 Identities=16% Similarity=0.050 Sum_probs=165.4
Q ss_pred ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC-----Ccc
Q 037666 11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD-----IAM 85 (375)
Q Consensus 11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~-----~~~ 85 (375)
+.+++.. |..|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.+++ ..+
T Consensus 35 ~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 111 (236)
T 1ikn_D 35 LAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGA--GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILK 111 (236)
T ss_dssp CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSC--CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGG
T ss_pred HHHhhcc-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhh
Confidence 3478887 89999999999999999999999999 899999999999999999999999999999998864 236
Q ss_pred ccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccc-hhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHH
Q 037666 86 VPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDD-ECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHV 163 (375)
Q Consensus 86 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~-~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~ 163 (375)
..|..|.||||+|+..|+.+++++|++.++ ++.++. .|+||||+|+..|+.+++++|+++ |.+++.+|.+|+||||+
T Consensus 112 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~ 190 (236)
T 1ikn_D 112 ATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC-GADVNRVTYQGYSPYQL 190 (236)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT-TCCSCCCCTTCCCGGGG
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccCCCCCHHHH
Confidence 788899999999999999999999999999 888887 999999999999999999999998 99999999999999999
Q ss_pred HHHhcCCCCCCCccchhhcc--chhhHh--hhcCCCCChhhhhHH
Q 037666 164 LARKNLTSSNQNPCGVENVV--PKKLAE--AINTGGLTPTALFSE 204 (375)
Q Consensus 164 A~~~~~~~~~~~~~~v~~~L--~~~~~~--~~n~~g~tpl~~a~~ 204 (375)
|+.+++. ++.++| .+++.. ..+.+|.||.+...+
T Consensus 191 A~~~~~~-------~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 228 (236)
T 1ikn_D 191 TWGRPST-------RIQQQLGQLTLENLQMLPESEDEESYDTESE 228 (236)
T ss_dssp CTTSSCH-------HHHHHHHTTSCGGGSSCCCCCTTTCCCCC--
T ss_pred HHccCch-------HHHHHHHHcchhhhhcCCccchHHHHhhhcc
Confidence 9999988 888887 556554 778999999987544
No 42
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=4.5e-31 Score=246.52 Aligned_cols=195 Identities=20% Similarity=0.163 Sum_probs=148.2
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhh--------------------------------
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTED-------------------------------- 49 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~-------------------------------- 49 (375)
+++++|+++|+++|.+.+..|+||||+|+..|+.++|++|+++ +++
T Consensus 39 ~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (337)
T 4g8k_A 39 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGA 116 (337)
T ss_dssp HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHc--CCchhhhccCCCchhHHHHhcccchhhHHhhhccc
Confidence 4678888899999987445699999999999999999999998 443
Q ss_pred -HhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCc---------cccCCCCChHHHHHHHcCcHHHHHHHHHh-cc-CC
Q 037666 50 -LAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIA---------MVPGGDGTLPIVRAAALGQRQTVVLLYEK-TK-GS 117 (375)
Q Consensus 50 -~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~---------~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~-~~ 117 (375)
++..|..|+||||+|+..|+.++++.|++.++++. ...+..|.||||+|+.+|+.+++++|+++ +. ++
T Consensus 117 ~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n 196 (337)
T 4g8k_A 117 DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN 196 (337)
T ss_dssp CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT
T ss_pred hhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC
Confidence 45567778888888888888888888888776641 12345678888888888888888888865 44 67
Q ss_pred cccchhhHHHHHHHhcCc----HHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc---chhhHhh
Q 037666 118 LTDDECIELLVKLIETDL----YAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV---PKKLAEA 190 (375)
Q Consensus 118 ~~d~~g~t~Lh~A~~~~~----~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L---~~~~~~~ 190 (375)
.+|..|+|++|.++..++ .++++.|+++ |.++|.+|.+|+||||+|++.+.. ++++.| .+.+++.
T Consensus 197 ~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~~~~-------~~v~~Ll~~~~~~vn~ 268 (337)
T 4g8k_A 197 ACDNMGRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHL-------GLVQRLLEQEHIEIND 268 (337)
T ss_dssp CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCH-------HHHHHHHTSTTCCTTC
T ss_pred ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhhhh-------HHHHHHHHhcCCcccC
Confidence 778888888877665432 3455666665 888888888888888888888766 555544 3577888
Q ss_pred hcCCCCChhhhhHHHH
Q 037666 191 INTGGLTPTALFSEKH 206 (375)
Q Consensus 191 ~n~~g~tpl~~a~~~~ 206 (375)
+|.+|+||+++|++..
T Consensus 269 ~d~~G~TpL~~A~~~g 284 (337)
T 4g8k_A 269 TDSDGKTALLLAVELK 284 (337)
T ss_dssp BCTTSCBHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHcC
Confidence 8888888888877653
No 43
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=2.9e-31 Score=227.75 Aligned_cols=161 Identities=17% Similarity=0.126 Sum_probs=152.0
Q ss_pred cccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCC
Q 037666 12 DEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDG 91 (375)
Q Consensus 12 ~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g 91 (375)
..+|.+ |..|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|..|
T Consensus 26 ~~~n~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g 101 (192)
T 2rfm_A 26 FLRNYR-DSYNRTPLMVACMLGMENAIDKLVEN--FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSG 101 (192)
T ss_dssp HHHTCC-CTTCCCHHHHHHHHTCGGGHHHHHHH--HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTS
T ss_pred HHHhCc-CCCCCCHHHHHHHcCCHHHHHHHHHh--ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCC
Confidence 345666 99999999999999999999999999 8999999999999999999999999999999999996 8899999
Q ss_pred ChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCC
Q 037666 92 TLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLT 170 (375)
Q Consensus 92 ~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~ 170 (375)
.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..|+.+++++|++. |.+++.+|.+|+||||+|+..++.
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL-GADISARDLTGLTAEASARIFGRQ 180 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhCcH
Confidence 999999999999999999999998 888999999999999999999999999998 999999999999999999999987
Q ss_pred CCCCCccchhhccc
Q 037666 171 SSNQNPCGVENVVP 184 (375)
Q Consensus 171 ~~~~~~~~v~~~L~ 184 (375)
++.++|.
T Consensus 181 -------~~v~~Ll 187 (192)
T 2rfm_A 181 -------EVIKIFT 187 (192)
T ss_dssp -------HHHHHHH
T ss_pred -------HHHHHHH
Confidence 7887763
No 44
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.97 E-value=9.2e-31 Score=229.60 Aligned_cols=172 Identities=17% Similarity=0.192 Sum_probs=161.8
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.++|.++|++++.. |..|+||||+|+..|+.+++++|+++. +.+++..|..|.||||+|+..|+.++++.|++.++
T Consensus 39 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 116 (223)
T 2f8y_A 39 DAAKRLLEASADANIQ-DNMGRTPLHAAVSADAQGVFQILIRNR-ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA 116 (223)
T ss_dssp HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHBT-TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCC
Confidence 4678888899999987 999999999999999999999999994 44899999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
++ +.+|.+|.||||+|+..|+.+++++|++.+. ++.+|..|+||||+|+++++.+++++|+++ +.+++.+|.+|+||
T Consensus 117 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~ 194 (223)
T 2f8y_A 117 DV-NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH-FANRDITDHMDRLP 194 (223)
T ss_dssp CT-TCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCH
T ss_pred CC-cCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCccccccCCCH
Confidence 96 8899999999999999999999999999998 888999999999999999999999999998 99999999999999
Q ss_pred HHHHHHhcCCCCCCCccchhhccc
Q 037666 161 LHVLARKNLTSSNQNPCGVENVVP 184 (375)
Q Consensus 161 Lh~A~~~~~~~~~~~~~~v~~~L~ 184 (375)
||+|+++++. ++.++|.
T Consensus 195 l~~A~~~~~~-------~i~~~L~ 211 (223)
T 2f8y_A 195 RDIAQERMHH-------DIVRLLD 211 (223)
T ss_dssp HHHHHHTTCH-------HHHHHHH
T ss_pred HHHHHHhcch-------HHHHHHH
Confidence 9999999988 8888873
No 45
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=3.1e-31 Score=237.92 Aligned_cols=169 Identities=18% Similarity=0.156 Sum_probs=154.0
Q ss_pred HHHHHhhCcccccc----ccCCCCCcHHHHHHHc---CCHHHHHHHHHcCChhhHhc-----------hhcCCChHHHHH
Q 037666 3 AKDIYDKYEDEIGQ----EITNLGNTALHVAAQA---NCIDFVKELLKMMSTEDLAK-----------KNKIGCTAFFYA 64 (375)
Q Consensus 3 v~~lL~~~~~~~~~----~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~~~~-----------~d~~g~tpLh~A 64 (375)
+.++|.++|.+++. . |.+|+||||+|+.. |+.+++++|++. +.+++. .|..|+||||+|
T Consensus 21 ll~~l~~~g~~i~~~~~~~-d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~--g~~~~~~~~~~~~~~~~~d~~g~t~L~~A 97 (256)
T 2etb_A 21 LLEYLRWNSKYLTDSAYTE-GSTGKTCLMKAVLNLQDGVNACIMPLLQI--DKDSGNPKPLVNAQCTDEFYQGHSALHIA 97 (256)
T ss_dssp HHHHHHHHTCCTTSGGGSB-TTTTBCHHHHHHHTCBTTBCTTHHHHHHH--HHHTTCSSCGGGCCCCSTTTTTCCHHHHH
T ss_pred HHHHHHHcCCCcccccccC-CCCCCCHHHHHHHccccchHHHHHHHHhc--CCcccchhhhcccccccccccCCCHHHHH
Confidence 55677789999998 5 99999999999999 999999999999 777663 347899999999
Q ss_pred HHcCcHHHHHHHHccCCCCccccCCC-------------CChHHHHHHHcCcHHHHHHHHH---hcc-CCcccchhhHHH
Q 037666 65 AGSGMVEIVEEAMKGNKDIAMVPGGD-------------GTLPIVRAAALGQRQTVVLLYE---KTK-GSLTDDECIELL 127 (375)
Q Consensus 65 a~~g~~~iv~~Ll~~~~~~~~~~d~~-------------g~tpLh~Aa~~g~~~iv~~Ll~---~~~-~~~~d~~g~t~L 127 (375)
+..|+.+++++|++.++++ +.+|.. |.||||+|+..|+.+++++|++ .+. ++.+|.+|+|||
T Consensus 98 ~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpL 176 (256)
T 2etb_A 98 IEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVL 176 (256)
T ss_dssp HHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred HHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHH
Confidence 9999999999999999996 777776 9999999999999999999999 777 888999999999
Q ss_pred HHHHh--cCcHH-------HHHHHHhcCCccc-------ccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666 128 VKLIE--TDLYA-------VALRLLKDRPQLA-------TKRDRNEETALHVLARKNLTSSNQNPCGVENVV 183 (375)
Q Consensus 128 h~A~~--~~~~~-------~v~~LL~~~~~~~-------~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L 183 (375)
|+|+. +++.+ +++.|+++ |.++ +.+|.+|+||||+|++.++. ++.++|
T Consensus 177 h~A~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~-------~~v~~L 240 (256)
T 2etb_A 177 HALVMIADNSPENSALVIHMYDGLLQM-GARLCPTVQLEEISNHQGLTPLKLAAKEGKI-------EIFRHI 240 (256)
T ss_dssp HHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH-------HHHHHH
T ss_pred HHHHHcccCCchhhHHHHHHHHHHHHc-CCCcccccccccccCCCCCCHHHHHHHhCCH-------HHHHHH
Confidence 99999 78888 99999998 8888 89999999999999999988 888887
No 46
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=2.5e-30 Score=216.72 Aligned_cols=154 Identities=14% Similarity=0.151 Sum_probs=146.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHH
Q 037666 21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAA 100 (375)
Q Consensus 21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 100 (375)
+|.||||.|+..|+.+++++|++. +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ--ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence 589999999999999999999999 7889999999999999999999999999999999986 8889999999999999
Q ss_pred cCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccch
Q 037666 101 LGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGV 179 (375)
Q Consensus 101 ~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v 179 (375)
.|+.+++++|++.+. ++.+|.+|+||||+|+..++.+++++|+++ |.+++.+|.+|+||||+|++.++. ++
T Consensus 79 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~-------~~ 150 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES-GADPTIETDSGYNSMDLAVALGYR-------SV 150 (167)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCH-------HH
T ss_pred cCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcH-------HH
Confidence 999999999999998 888999999999999999999999999997 999999999999999999999988 88
Q ss_pred hhccch
Q 037666 180 ENVVPK 185 (375)
Q Consensus 180 ~~~L~~ 185 (375)
.++|..
T Consensus 151 ~~~L~~ 156 (167)
T 3v31_A 151 QQVIES 156 (167)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888743
No 47
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=6.9e-31 Score=239.86 Aligned_cols=178 Identities=16% Similarity=0.072 Sum_probs=161.8
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
+++++|.++|++++.. +|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus 45 ~~v~~Ll~~g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga 119 (285)
T 3kea_A 45 RLVCTLLNAGALKNLL---ENEFPLHQAATLEDTKIVKILLFS--GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNW 119 (285)
T ss_dssp HHHHHHHHTTGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCG
T ss_pred HHHHHHHhCCCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC
Confidence 4678888999999876 499999999999999999999999 89999999999999999999999999999999999
Q ss_pred CCccccCCCC-ChHHHHHHHcCcHHHHHHHHHhccCCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 82 DIAMVPGGDG-TLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 82 ~~~~~~d~~g-~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
++ +.+|..| .||||+|+..|+.+++++|++.++.......|+||||+|+..|+.+++++|+++ |.+++.+|.+|+||
T Consensus 120 ~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~ 197 (285)
T 3kea_A 120 RL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFIP 197 (285)
T ss_dssp GG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHH-HHHTCTTCCCBCCT
T ss_pred CC-CccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHc-CCCCCcccCCCCCh
Confidence 96 8899999 899999999999999999999998222223899999999999999999999998 99999999999998
Q ss_pred -HHHHHHhcCCCCCCCccchhhcc--chhhHhhhcC
Q 037666 161 -LHVLARKNLTSSNQNPCGVENVV--PKKLAEAINT 193 (375)
Q Consensus 161 -Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~ 193 (375)
||+|++.++. ++.++| .+++++.+|.
T Consensus 198 ~L~~A~~~~~~-------~~v~~Ll~~gad~~~~~~ 226 (285)
T 3kea_A 198 DIKLAIDNKDI-------EMLQALFKYDINIYSANL 226 (285)
T ss_dssp THHHHHHHTCH-------HHHHHHTTSCBCSTTTTG
T ss_pred HHHHHHHcCCH-------HHHHHHHHcCCCCCCCCh
Confidence 9999999987 788877 6777777763
No 48
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=3.8e-31 Score=239.73 Aligned_cols=195 Identities=18% Similarity=0.131 Sum_probs=154.0
Q ss_pred ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--ChhhHh----chhcCCChHHHHHHHc---CcHHHHHHHHccCC
Q 037666 11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMM--STEDLA----KKNKIGCTAFFYAAGS---GMVEIVEEAMKGNK 81 (375)
Q Consensus 11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~--~~~~~~----~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~ 81 (375)
++..+.. |..|+||||.|++.|+.++|+.|++.. .+.+++ ..|..|+||||+|+.. |+.+++++|++.++
T Consensus 3 ~a~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga 81 (273)
T 2pnn_A 3 SAGEKPP-RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVAR 81 (273)
T ss_dssp ---------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred cccCCCC-CcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhc
Confidence 4444555 889999999999999999999999851 033343 4588999999999986 99999999999875
Q ss_pred CCc----------cccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccc--------------hhhHHHHHHHhcCcH
Q 037666 82 DIA----------MVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDD--------------ECIELLVKLIETDLY 136 (375)
Q Consensus 82 ~~~----------~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~--------------~g~t~Lh~A~~~~~~ 136 (375)
+.. ..+|.+|.||||+|+..|+.+++++|++.++ ++.++. .|+||||+|+..|+.
T Consensus 82 ~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 161 (273)
T 2pnn_A 82 KTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL 161 (273)
T ss_dssp HTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH
T ss_pred cccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCH
Confidence 421 2256789999999999999999999999998 777776 799999999999999
Q ss_pred HHHHHHHhc--CCcccccccCCCCcHHHHHHHhcCCCCCCC--ccchhhcc--chhhHh-------hhcCCCCChhhhhH
Q 037666 137 AVALRLLKD--RPQLATKRDRNEETALHVLARKNLTSSNQN--PCGVENVV--PKKLAE-------AINTGGLTPTALFS 203 (375)
Q Consensus 137 ~~v~~LL~~--~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~--~~~v~~~L--~~~~~~-------~~n~~g~tpl~~a~ 203 (375)
+++++|++. .|.+++.+|.+|+||||+|+..++...... ..++.++| .+++++ .+|.+|+||+++|.
T Consensus 162 ~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~ 241 (273)
T 2pnn_A 162 AIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAA 241 (273)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHH
T ss_pred HHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHH
Confidence 999999994 499999999999999999999876210000 00455555 667775 48999999999998
Q ss_pred HHH
Q 037666 204 EKH 206 (375)
Q Consensus 204 ~~~ 206 (375)
+..
T Consensus 242 ~~g 244 (273)
T 2pnn_A 242 SSG 244 (273)
T ss_dssp HTT
T ss_pred HhC
Confidence 654
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=4.4e-30 Score=232.67 Aligned_cols=180 Identities=19% Similarity=0.147 Sum_probs=146.6
Q ss_pred hCcccccc---ccCCCCCcHHHHHHHc---CCHHHHHHHHHcCChhh-------Hhc----hhcCCChHHHHHHHcCcHH
Q 037666 9 KYEDEIGQ---EITNLGNTALHVAAQA---NCIDFVKELLKMMSTED-------LAK----KNKIGCTAFFYAAGSGMVE 71 (375)
Q Consensus 9 ~~~~~~~~---~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~~~~~~-------~~~----~d~~g~tpLh~Aa~~g~~~ 71 (375)
+.+.+++. ..|..|+||||+|+.. |+.+++++|+++ +++ ++. .|..|+||||+|+..|+.+
T Consensus 38 ~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~--ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~ 115 (273)
T 2pnn_A 38 RSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDV--ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMT 115 (273)
T ss_dssp HSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHH--HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHH
T ss_pred hcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHh--hccccchhHHhhcccccccCCCCCHHHHHHHcCCHH
Confidence 46666542 3378999999999987 999999999999 665 343 5678999999999999999
Q ss_pred HHHHHHccCCCCccccCC--------------CCChHHHHHHHcCcHHHHHHHHH---hcc-CCcccchhhHHHHHHHhc
Q 037666 72 IVEEAMKGNKDIAMVPGG--------------DGTLPIVRAAALGQRQTVVLLYE---KTK-GSLTDDECIELLVKLIET 133 (375)
Q Consensus 72 iv~~Ll~~~~~~~~~~d~--------------~g~tpLh~Aa~~g~~~iv~~Ll~---~~~-~~~~d~~g~t~Lh~A~~~ 133 (375)
++++|++.++++ +.+|. .|.||||+|+..|+.+++++|++ .+. ++.+|.+|+||||+|+..
T Consensus 116 ~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 116 LVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp HHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHc
Confidence 999999999996 77776 79999999999999999999999 777 888999999999999998
Q ss_pred Cc---------HHHHHHHHhcCCcccc-------cccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chh-hHhhhcCC
Q 037666 134 DL---------YAVALRLLKDRPQLAT-------KRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKK-LAEAINTG 194 (375)
Q Consensus 134 ~~---------~~~v~~LL~~~~~~~~-------~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~-~~~~~n~~ 194 (375)
++ .++++.|++. |.+++ .+|.+|+||||+|++.++. +++++| +++ ++......
T Consensus 195 ~~~~~~~~~~~~~~v~~Ll~~-ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~-------~iv~~Ll~~ga~dp~~~~~~ 266 (273)
T 2pnn_A 195 ADNTVDNTKFVTSMYNEILIL-GAKLHPTLKLEEITNRKGLTPLALAASSGKI-------GVLAYILQREIHEPECRHAA 266 (273)
T ss_dssp CCSCHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH-------HHHHHHHHHHTC--------
T ss_pred cCcchhHHHHHHHHHHHHHHh-hhhcccccccccccCCCCCCHHHHHHHhChH-------HHHHHHHHCCCCCchhhhhh
Confidence 87 7899999988 77776 5899999999999999988 888887 455 55555555
Q ss_pred CCChh
Q 037666 195 GLTPT 199 (375)
Q Consensus 195 g~tpl 199 (375)
+.+|.
T Consensus 267 ~~~~~ 271 (273)
T 2pnn_A 267 AHHHH 271 (273)
T ss_dssp -----
T ss_pred hhhcc
Confidence 55543
No 50
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=1e-30 Score=239.57 Aligned_cols=178 Identities=20% Similarity=0.153 Sum_probs=162.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
+.+|.||||.||..|+.+++++|+++ +.+++..|.+|.||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A 113 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLER--GADINYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAA 113 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHH--CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 45678999999999999999999999 8899999999999999999999999999999999996 88999999999999
Q ss_pred HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccc--------------------------
Q 037666 99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLAT-------------------------- 151 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~-------------------------- 151 (375)
+..|+.+++++|+++++ ++..|.+|.||||+|+..++.++++.++...+.+++
T Consensus 114 ~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (299)
T 1s70_B 114 ASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDV 193 (299)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchh
Confidence 99999999999999998 888999999999999999999999988876555443
Q ss_pred cccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 152 KRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 152 ~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
..|..|.||||+|+..|+. ++.++| .+++++.+|.+|.||+++|.+..
T Consensus 194 ~~~~~g~t~L~~A~~~g~~-------~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~ 243 (299)
T 1s70_B 194 RHAKSGGTALHVAAAKGYT-------EVLKLLIQARYDVNIKDYDGWTPLHAAAHWG 243 (299)
T ss_dssp CCTTTCCCHHHHHHHHTCH-------HHHHHHHTTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred hhcCCCCCHHHHHHHCCcH-------HHHHHHHHcCCCCCCcCCCCCcHHHHHHhcC
Confidence 3568899999999999988 788877 67899999999999999987653
No 51
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.96 E-value=1e-30 Score=246.67 Aligned_cols=182 Identities=18% Similarity=0.105 Sum_probs=160.7
Q ss_pred ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCC
Q 037666 11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGD 90 (375)
Q Consensus 11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~ 90 (375)
+.+.+.. |.+|.||||+|+..|+.++|++|+++ +.+++.+|..|.||||+|+..|+.+++++|++.+++. .+.+
T Consensus 10 ~~~~~~~-d~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~ 83 (364)
T 3ljn_A 10 KLNRIKS-DDENMEKIHVAARKGQTDEVRRLIET--GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWH 83 (364)
T ss_dssp ------C-CHHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBT
T ss_pred CCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccC
Confidence 3455665 88999999999999999999999999 8999999999999999999999999999999999854 3458
Q ss_pred CChHHHHHHHcCcHHHHHHHHHh----cc-CCc-----------------ccchhhHHHHHHHhcC--cHHHHHHHHhcC
Q 037666 91 GTLPIVRAAALGQRQTVVLLYEK----TK-GSL-----------------TDDECIELLVKLIETD--LYAVALRLLKDR 146 (375)
Q Consensus 91 g~tpLh~Aa~~g~~~iv~~Ll~~----~~-~~~-----------------~d~~g~t~Lh~A~~~~--~~~~v~~LL~~~ 146 (375)
|.||||+|+..|+.+++++|++. +. .+. .|.+|.||||+|+..| +.+++++|++.
T Consensus 84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~- 162 (364)
T 3ljn_A 84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL- 162 (364)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc-
Confidence 99999999999999999999998 44 333 7778999999999999 99999999999
Q ss_pred CcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhh-----HhhhcCCCCChhhhhHHHH
Q 037666 147 PQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKL-----AEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 147 ~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~-----~~~~n~~g~tpl~~a~~~~ 206 (375)
|.+++.+|.+|+||||+|+..++. +++++| .+++ ++.+|..|.||+++|+...
T Consensus 163 ga~~~~~d~~g~t~L~~A~~~g~~-------~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g 222 (364)
T 3ljn_A 163 GASPTAKDKADETPLMRAMEFRNR-------EALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN 222 (364)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred CCCCcccCCCCCCHHHHHHHcCCH-------HHHHHHHhcccccccccccccCCCCCcHHHHHHHcC
Confidence 999999999999999999999988 788877 5556 8899999999999998653
No 52
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=3.7e-30 Score=233.98 Aligned_cols=153 Identities=22% Similarity=0.203 Sum_probs=98.5
Q ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChh-hHhchhcCCChHHHHHH-----HcCcHHHHHHHHccCCCCcccc
Q 037666 14 IGQEITNLGNTALHVAAQANCIDFVKELLKMMSTE-DLAKKNKIGCTAFFYAA-----GSGMVEIVEEAMKGNKDIAMVP 87 (375)
Q Consensus 14 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~-~~~~~d~~g~tpLh~Aa-----~~g~~~iv~~Ll~~~~~~~~~~ 87 (375)
+|.. |.+|+||||+|+..|+.+++++|++. +. +++..|..|+||||+|+ ..|+.++++.|++.+.+. ...
T Consensus 104 ~n~~-d~~g~T~Lh~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~ 179 (276)
T 4hbd_A 104 VNIA-DSNGNTALHYSVSHANFPVVQQLLDS--GVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKA 179 (276)
T ss_dssp HTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--SCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCC
T ss_pred CcCC-CCCCCCHHHHHHHCCCHHHHHHHHHC--CCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-ccc
Confidence 4554 66666666666666666666666666 44 56666666666666666 446666666666666543 555
Q ss_pred CCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHH
Q 037666 88 GGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLAR 166 (375)
Q Consensus 88 d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~ 166 (375)
|..|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..|+.++++.|++..|.+++.+|.+|+||||+|++
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~ 259 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALD 259 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHH
Confidence 6666666666666666666666666666 566666666666666666666666666664466666666666666666666
Q ss_pred hcCC
Q 037666 167 KNLT 170 (375)
Q Consensus 167 ~~~~ 170 (375)
.++.
T Consensus 260 ~g~~ 263 (276)
T 4hbd_A 260 AGQS 263 (276)
T ss_dssp HTCH
T ss_pred cCCH
Confidence 6655
No 53
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.2e-29 Score=213.33 Aligned_cols=154 Identities=23% Similarity=0.199 Sum_probs=145.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
...+.||||.|++.|+.+++++|+++ +.+++.+|.+|+||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 87 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMAN--GADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLA 87 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHH
Confidence 55678999999999999999999999 8999999999999999999999999999999999986 88999999999999
Q ss_pred HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCcc
Q 037666 99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPC 177 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~ 177 (375)
+..|+.+++++|++.+. .+.+|.+|+||||+|+..++.+++++|+++ +.+++.+|.+|+||||+|++.++.
T Consensus 88 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~------- 159 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKFGKTAFDISIDNGNE------- 159 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhCCH-------
Confidence 99999999999999998 888999999999999999999999999998 999999999999999999999977
Q ss_pred chhhcc
Q 037666 178 GVENVV 183 (375)
Q Consensus 178 ~v~~~L 183 (375)
++.++|
T Consensus 160 ~~~~~L 165 (169)
T 2y1l_E 160 DLAEIL 165 (169)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777766
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=5.7e-30 Score=230.11 Aligned_cols=170 Identities=21% Similarity=0.135 Sum_probs=148.4
Q ss_pred HHHHHhhCcccccccc---CCCCCcHHHHHH---HcCCHHHHHHHHHcCChhh-----------HhchhcCCChHHHHHH
Q 037666 3 AKDIYDKYEDEIGQEI---TNLGNTALHVAA---QANCIDFVKELLKMMSTED-----------LAKKNKIGCTAFFYAA 65 (375)
Q Consensus 3 v~~lL~~~~~~~~~~~---d~~g~tpLh~A~---~~g~~~~v~~Ll~~~~~~~-----------~~~~d~~g~tpLh~Aa 65 (375)
+.++|.++|.+++... |.+|+||||+|+ ..|+.+++++|++. +++ .+..|..|+||||+|+
T Consensus 24 ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~--g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~ 101 (260)
T 3jxi_A 24 LLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDI--AEKTGNMREFINSPFRDVYYRGQTALHIAI 101 (260)
T ss_dssp HHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHH--HHHTTCHHHHHTCCBCCSSEESBCHHHHHH
T ss_pred HHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHh--cccccchHhhhcccccccccCCCCHHHHHH
Confidence 3455557888888651 377999999999 67999999999998 654 2334558999999999
Q ss_pred HcCcHHHHHHHHccCCCCccccC--------------CCCChHHHHHHHcCcHHHHHHHHH---hcc-CCcccchhhHHH
Q 037666 66 GSGMVEIVEEAMKGNKDIAMVPG--------------GDGTLPIVRAAALGQRQTVVLLYE---KTK-GSLTDDECIELL 127 (375)
Q Consensus 66 ~~g~~~iv~~Ll~~~~~~~~~~d--------------~~g~tpLh~Aa~~g~~~iv~~Ll~---~~~-~~~~d~~g~t~L 127 (375)
..|+.+++++|++.++++ +.+| ..|.||||+|+..|+.+++++|++ .+. ++.+|.+|+|||
T Consensus 102 ~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpL 180 (260)
T 3jxi_A 102 ERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVL 180 (260)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHH
T ss_pred HcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHH
Confidence 999999999999999996 7777 689999999999999999999999 777 888999999999
Q ss_pred HHHHhcCc---------HHHHHHHHhcCCccc-------ccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666 128 VKLIETDL---------YAVALRLLKDRPQLA-------TKRDRNEETALHVLARKNLTSSNQNPCGVENVV 183 (375)
Q Consensus 128 h~A~~~~~---------~~~v~~LL~~~~~~~-------~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L 183 (375)
|+|+..++ .++++.|+++ |.++ +.+|.+|+||||+|++.|+. +++++|
T Consensus 181 h~A~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~-------~~v~~L 244 (260)
T 3jxi_A 181 HALVAIADNTRENTKFVTKMYDLLLIK-CAKLFPDTNLEALLNNDGLSPLMMAAKTGKI-------GIFQHI 244 (260)
T ss_dssp HHHHHHCCSSHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH-------HHHHHH
T ss_pred HHHHHhccCchhHHHHHHHHHHHHHHh-CcccccccchhhcccCCCCCHHHHHHHcCCH-------HHHHHH
Confidence 99998777 6899999988 7777 78999999999999999988 888877
No 55
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.1e-29 Score=209.75 Aligned_cols=150 Identities=17% Similarity=0.111 Sum_probs=140.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHc
Q 037666 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAAL 101 (375)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~ 101 (375)
..||||.|++.|+.+++++|++. +.+++ .|..|.||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~--g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN--GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH--TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc--CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 46899999999999999999999 66665 5889999999999999999999999999986 88999999999999999
Q ss_pred CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchh
Q 037666 102 GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVE 180 (375)
Q Consensus 102 g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~ 180 (375)
|+.+++++|+++++ ++.+|.+|+||||+|+.+|+.+++++|+++ |.+++.+|.+|+||||+|++.++. ++.
T Consensus 78 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~-------~i~ 149 (153)
T 1awc_B 78 GHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAFDISIDNGNE-------DLA 149 (153)
T ss_dssp TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHH
T ss_pred ChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCH-------HHH
Confidence 99999999999998 888999999999999999999999999998 999999999999999999999977 777
Q ss_pred hcc
Q 037666 181 NVV 183 (375)
Q Consensus 181 ~~L 183 (375)
++|
T Consensus 150 ~~L 152 (153)
T 1awc_B 150 EIL 152 (153)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 56
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.4e-30 Score=231.58 Aligned_cols=186 Identities=15% Similarity=0.068 Sum_probs=153.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH----cCChhhHhchh----cCCChHHHHHH---HcCcHHHHHHHHccCCCC----
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLK----MMSTEDLAKKN----KIGCTAFFYAA---GSGMVEIVEEAMKGNKDI---- 83 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~----~~~~~~~~~~d----~~g~tpLh~Aa---~~g~~~iv~~Ll~~~~~~---- 83 (375)
+..|+||||.|++.|+.+.++.|++ . +.+++..+ .+|+||||+|+ +.|+.+++++|++.+.+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~--~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 79 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH--KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR 79 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhc--CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH
Confidence 5679999999999999996665555 6 67777666 67999999999 789999999999986431
Q ss_pred ------ccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCccc--------------chhhHHHHHHHhcCcHHHHHHH
Q 037666 84 ------AMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTD--------------DECIELLVKLIETDLYAVALRL 142 (375)
Q Consensus 84 ------~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d--------------~~g~t~Lh~A~~~~~~~~v~~L 142 (375)
...+|.+|+||||+|+..|+.+++++|++.++ ++.+| ..|+||||+|+..|+.+++++|
T Consensus 80 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 80 EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 13445689999999999999999999999998 77777 5799999999999999999999
Q ss_pred Hhc--CCcccccccCCCCcHHHHHHHhcCCCCC--CCccchhhcc--chhhH-------hhhcCCCCChhhhhHHHH
Q 037666 143 LKD--RPQLATKRDRNEETALHVLARKNLTSSN--QNPCGVENVV--PKKLA-------EAINTGGLTPTALFSEKH 206 (375)
Q Consensus 143 L~~--~~~~~~~~d~~G~T~Lh~A~~~~~~~~~--~~~~~v~~~L--~~~~~-------~~~n~~g~tpl~~a~~~~ 206 (375)
++. .|.+++.+|.+|+||||+|++.+..... +...++.++| .++++ +.+|.+|+||+++|.+..
T Consensus 160 l~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 160 TENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred HhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC
Confidence 993 4999999999999999999987752100 0001455555 66777 679999999999998764
No 57
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=2.7e-29 Score=222.03 Aligned_cols=179 Identities=16% Similarity=0.096 Sum_probs=164.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
|..|.||||.|+..|+.+++++|++. +.+++.+|..|.||||+|+..|+.+++++|++.+++.....+..|.||||+|
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A 83 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEA--GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWA 83 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHc--CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHH
Confidence 88899999999999999999999999 8899999999999999999999999999999999987666667799999999
Q ss_pred HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCcc
Q 037666 99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPC 177 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~ 177 (375)
+..|+.+++++|++.+. .+.+|..|.||||.|+..++.+++++|+++ +.+++.+|.+|.||||+|+..+...
T Consensus 84 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~------ 156 (240)
T 3eu9_A 84 TRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMDQNGMTPLMWAAYRTHSV------ 156 (240)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHCCSS------
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccCCCCCcHHHHHHHhCChH------
Confidence 99999999999999998 888899999999999999999999999998 8999999999999999999877532
Q ss_pred chhhcc--chhhHhhhcC-CCCChhhhhHHHH
Q 037666 178 GVENVV--PKKLAEAINT-GGLTPTALFSEKH 206 (375)
Q Consensus 178 ~v~~~L--~~~~~~~~n~-~g~tpl~~a~~~~ 206 (375)
++.++| .+.+++..+. .|.||+++|....
T Consensus 157 ~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~ 188 (240)
T 3eu9_A 157 DPTRLLLTFNVSVNLGDKYHKNTALHWAVLAG 188 (240)
T ss_dssp TTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHT
T ss_pred HHHHHHHhcCCCcchhhccCCCcHHHHHHHcC
Confidence 677776 6778888887 8999999988654
No 58
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=6.8e-30 Score=212.81 Aligned_cols=153 Identities=20% Similarity=0.124 Sum_probs=142.3
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHH
Q 037666 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAA 99 (375)
Q Consensus 20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa 99 (375)
+...||||.|+..|+.+++++|+++ +.+++.+|..|+||||+|+. |+.+++++|++.++++ +.+|..|.||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQN--NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTS--CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhC--CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 4578999999999999999999998 88999999999999999999 9999999999999986 889999999999999
Q ss_pred HcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccc
Q 037666 100 ALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCG 178 (375)
Q Consensus 100 ~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~ 178 (375)
..|+.+++++|++.+. ++.+|.+|+||||+|++.|+.+++++|+++....++.+|.+|+||||+|++.++. +
T Consensus 79 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~-------~ 151 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRN-------E 151 (162)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCH-------H
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCH-------H
Confidence 9999999999999998 8889999999999999999999999999994444799999999999999999987 7
Q ss_pred hhhcc
Q 037666 179 VENVV 183 (375)
Q Consensus 179 v~~~L 183 (375)
+.++|
T Consensus 152 ~~~~L 156 (162)
T 1ihb_A 152 VVSLM 156 (162)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88776
No 59
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=7.1e-30 Score=216.66 Aligned_cols=166 Identities=15% Similarity=0.066 Sum_probs=148.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
++++.+|||.|+..|+.+++++|++.. +.+++..|..|+||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|
T Consensus 2 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 2 SPEFMDDIFTQCREGNAVAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLA 79 (179)
T ss_dssp -----CCHHHHHHHTCHHHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence 356889999999999999999999996 7789999999999999999999999999999999996 88999999999999
Q ss_pred HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCcc
Q 037666 99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPC 177 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~ 177 (375)
+..|+.+++++|++.++ ++.+|.+|+||||+|+..++.++++.|+++ |.+++.+|.+|+||||+|+..+..
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~------- 151 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN-GALVSICNKYGEMPVDKAKAPLRE------- 151 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCTTSCCGGGGSCHHHHH-------
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhccCCCCcHHHHHHHHHH-------
Confidence 99999999999999998 888999999999999999999999999998 999999999999999999998877
Q ss_pred chhhcc--chhhHhhhcCC
Q 037666 178 GVENVV--PKKLAEAINTG 194 (375)
Q Consensus 178 ~v~~~L--~~~~~~~~n~~ 194 (375)
++.++| .+++++..+.+
T Consensus 152 ~~~~~L~~~g~~~~~~~~~ 170 (179)
T 3f6q_A 152 LLRERAEKMGQNLNRIPYK 170 (179)
T ss_dssp HHHHHHHHTTCCCSCBCCC
T ss_pred HHHHHHHHhhcCcccCCcc
Confidence 777777 45555544433
No 60
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.96 E-value=3.4e-29 Score=237.39 Aligned_cols=173 Identities=15% Similarity=0.138 Sum_probs=159.9
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCh---hhHhchhcCCChHHHHHHHcC---cHHHHHH
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMST---EDLAKKNKIGCTAFFYAAGSG---MVEIVEE 75 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~---~~~~~~d~~g~tpLh~Aa~~g---~~~iv~~ 75 (375)
+++++|.++|++++.. |.+|.||||+|+..|+.+++++|+++ + .+++..|..|.||||+|+..| +.+++++
T Consensus 180 ~iv~~Ll~~ga~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~ 256 (373)
T 2fo1_E 180 RLVAYLMKAGADPTIY-NKSERSALHQAAANRDFGMMVYMLNS--TKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKL 256 (373)
T ss_dssp HHHHHHHHTTCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHTTS--HHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHH
T ss_pred HHHHHHHHCCCCCccc-CCCCCCHHHHHHHCCCHHHHHHHHhc--CccccChhhcCCCCCCHHHHHHHhCCcchHHHHHH
Confidence 5788999999999987 99999999999999999999999998 6 688999999999999999998 8999999
Q ss_pred HHccCCCCcc-------ccCCCCChHHHHHHHcCcHHHHHHHHHhc-c-CCcccchhhHHHHHHHhcCcHHHHHHHHhcC
Q 037666 76 AMKGNKDIAM-------VPGGDGTLPIVRAAALGQRQTVVLLYEKT-K-GSLTDDECIELLVKLIETDLYAVALRLLKDR 146 (375)
Q Consensus 76 Ll~~~~~~~~-------~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~-~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~ 146 (375)
|++.++++.. .+|..|.||||+|+..|+.+++++|++.+ . ++.+|.+|+||||+|+.+|+.+++++|+++
T Consensus 257 Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~- 335 (373)
T 2fo1_E 257 LVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ- 335 (373)
T ss_dssp HHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-
T ss_pred HHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-
Confidence 9999988621 26779999999999999999999999987 4 888999999999999999999999999998
Q ss_pred CcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccch
Q 037666 147 PQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPK 185 (375)
Q Consensus 147 ~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~ 185 (375)
|.+++.+|.+|+||||+|+.+++. +++++|..
T Consensus 336 gad~~~~d~~g~t~l~~A~~~g~~-------~iv~~Ll~ 367 (373)
T 2fo1_E 336 GASVEAVDATDHTARQLAQANNHH-------NIVDIFDR 367 (373)
T ss_dssp TCCSSCCCSSSCCHHHHHHHTTCH-------HHHHHHHT
T ss_pred CCCccCCCCCCCCHHHHHHHcCCH-------HHHHHHHh
Confidence 999999999999999999999988 88888843
No 61
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=1.1e-29 Score=212.46 Aligned_cols=155 Identities=21% Similarity=0.269 Sum_probs=143.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
|.+|.||||.|++.|+.++++.|++.. +.+++..|..|+||||+|+..|+.+++++|++.+.++ +.+|.+|.||||+|
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 82 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNA 82 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHH
Confidence 678999999999999999999999975 6778888999999999999999999999999999996 88999999999999
Q ss_pred HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCcc
Q 037666 99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPC 177 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~ 177 (375)
+..|+.+++++|++.+. ++.+|..|+||||+|+..|+.+++++|+++ |.+++.+|.+|+||||+|++ ++.
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~a~~-~~~------- 153 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKNRDGNTPLDLVKD-GDT------- 153 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTGGGSCT-TCH-------
T ss_pred HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCChhHhHhc-CCh-------
Confidence 99999999999999998 888999999999999999999999999998 99999999999999999776 555
Q ss_pred chhhccc
Q 037666 178 GVENVVP 184 (375)
Q Consensus 178 ~v~~~L~ 184 (375)
++.++|.
T Consensus 154 ~i~~~L~ 160 (165)
T 3twr_A 154 DIQDLLR 160 (165)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777763
No 62
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=3.9e-29 Score=206.98 Aligned_cols=150 Identities=21% Similarity=0.173 Sum_probs=141.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHc
Q 037666 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAAL 101 (375)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~ 101 (375)
|.||||.|+..|+.+++++|++.. +.+++..|..|+||||+ +..|+.++++.|++.++++ +.+|.+|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRE-LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTT-CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhh-CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHc
Confidence 579999999999999999999994 67899999999999999 9999999999999999996 88999999999999999
Q ss_pred CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchh
Q 037666 102 GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVE 180 (375)
Q Consensus 102 g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~ 180 (375)
|+.+++++|++.+. ++.+|.+|+||||+|+..|+.+++++|++. .+++.+|.+|+||||+|++.++. ++.
T Consensus 79 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~-------~~v 149 (156)
T 1bd8_A 79 GFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGAQ-------DLV 149 (156)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCH-------HHH
T ss_pred CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcH-------HHH
Confidence 99999999999998 888999999999999999999999999987 88999999999999999999977 777
Q ss_pred hcc
Q 037666 181 NVV 183 (375)
Q Consensus 181 ~~L 183 (375)
++|
T Consensus 150 ~~L 152 (156)
T 1bd8_A 150 DIL 152 (156)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 63
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.6e-30 Score=229.82 Aligned_cols=189 Identities=15% Similarity=-0.001 Sum_probs=158.1
Q ss_pred HHHhhCccccccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666 5 DIYDKYEDEIGQE--ITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD 82 (375)
Q Consensus 5 ~lL~~~~~~~~~~--~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 82 (375)
+.|+++|.+.+.. .+.+|.||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+..|+.+++++|++.+++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKE--MNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHH--SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 3455567766533 255677899999999999999999999 889999999999999999999999999999999999
Q ss_pred CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCccc-chhhHHHHHH--HhcCcHHHHHHHHhcCCcccccccCCCC
Q 037666 83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTD-DECIELLVKL--IETDLYAVALRLLKDRPQLATKRDRNEE 158 (375)
Q Consensus 83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d-~~g~t~Lh~A--~~~~~~~~v~~LL~~~~~~~~~~d~~G~ 158 (375)
+ +.+|.+|.||||+|+..|+.+++++|++.++ ++..+ .+|+||||+| +..++.+++++|++. |.+++.+|..|.
T Consensus 80 ~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~-ga~~~~~~~~~~ 157 (229)
T 2vge_A 80 V-NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV-EQSMGLMNSGAV 157 (229)
T ss_dssp T-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH-HHHTTTSGGGEE
T ss_pred C-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc-CCCcccccCCch
Confidence 6 8899999999999999999999999999998 77765 6999999999 999999999999998 999999999999
Q ss_pred cHHHHHHHhcCCCCCCCccchhhcc-chhh--HhhhcCCCCChhhhhHHHH
Q 037666 159 TALHVLARKNLTSSNQNPCGVENVV-PKKL--AEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 159 T~Lh~A~~~~~~~~~~~~~~v~~~L-~~~~--~~~~n~~g~tpl~~a~~~~ 206 (375)
||+|.++.... ...++ .+++ ++.+|.+|+||+++|+...
T Consensus 158 ~~l~~~~~~~~---------~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 158 YALWDYSAEFG---------DELSFREGESVTVLRRDGPEETDWWWAALHG 199 (229)
T ss_dssp EESSCBCCSST---------TBCCBCTTCEEEEEESSCTTCSSEEEEEETT
T ss_pred HHHHHHhhccc---------cccCccccccccccccCCCcccHHHHHHHcC
Confidence 99996554431 11222 4555 6788999999999987654
No 64
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.96 E-value=2.8e-28 Score=227.55 Aligned_cols=184 Identities=17% Similarity=0.153 Sum_probs=158.2
Q ss_pred HhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhc----------hhcCCChHHHHHHHcCcHHHHHHH
Q 037666 7 YDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAK----------KNKIGCTAFFYAAGSGMVEIVEEA 76 (375)
Q Consensus 7 L~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~----------~d~~g~tpLh~Aa~~g~~~iv~~L 76 (375)
+...+.+++.. |..|.||||+|+..|+.+++++|+++ +++++. .+..|.||||+|++.|+.+++++|
T Consensus 111 ~~~~~~~~~~~-d~~g~t~l~~A~~~~~~~~~~~ll~~--ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~L 187 (337)
T 4g8k_A 111 FLSKGADVNEC-DFYGFTAFMEAAVYGKVKALKFLYKR--GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL 187 (337)
T ss_dssp HHTTTCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHH
T ss_pred hhhccchhhhh-ccCCCCHHHHHHHcCcHHHHHHHHHc--CCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHH
Confidence 33444556665 88999999999999999999999998 665543 456799999999999999999999
Q ss_pred Hc-cCCCCccccCCCCChHHHHHHHcCc----HHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCccc
Q 037666 77 MK-GNKDIAMVPGGDGTLPIVRAAALGQ----RQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLA 150 (375)
Q Consensus 77 l~-~~~~~~~~~d~~g~tpLh~Aa~~g~----~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~ 150 (375)
++ .+.++ +.+|..|.||+|.++..++ .+++++|+++++ ++.+|.+|+||||+|+..|+.++++.|+...+.++
T Consensus 188 L~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~v 266 (337)
T 4g8k_A 188 LDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEI 266 (337)
T ss_dssp HHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCT
T ss_pred HhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcc
Confidence 96 47775 8899999999999887554 468899999998 89999999999999999999999999999889999
Q ss_pred ccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHH
Q 037666 151 TKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 151 ~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
|.+|.+|+||||+|++.|+. +++++| .|++++ +++|+++|.+..
T Consensus 267 n~~d~~G~TpL~~A~~~g~~-------~iv~~Ll~~GAd~n-----~~~~L~~A~~~~ 312 (337)
T 4g8k_A 267 NDTDSDGKTALLLAVELKLK-------KIAELLCKRGASTD-----CGDLVMTARRNY 312 (337)
T ss_dssp TCBCTTSCBHHHHHHHTTCH-------HHHHHHHTTSCSST-----TCCHHHHHHHTT
T ss_pred cCcCCCCCCHHHHHHHcCCH-------HHHHHHHHCCCCCC-----CCCHHHHHHHcC
Confidence 99999999999999999988 888887 555544 567999987653
No 65
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=4.8e-29 Score=226.57 Aligned_cols=180 Identities=13% Similarity=0.110 Sum_probs=162.2
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHH
Q 037666 20 NLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAA 99 (375)
Q Consensus 20 ~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa 99 (375)
..+++++|.|+..|+.+.++.+++...+..+|.+|.+|+||||+|+..|+.+++++|++.++...+.+|..|.||||+|+
T Consensus 74 ~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 74 LACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HHHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence 34678899999999999999999883122399999999999999999999999999999998334889999999999999
Q ss_pred -----HcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCC
Q 037666 100 -----ALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSN 173 (375)
Q Consensus 100 -----~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~ 173 (375)
..++.+++++|++.+. .+..|..|+||||+|+.+|+.++++.|++. |.++|.+|.+|+||||+|+..++.
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-gad~n~~d~~G~TpLh~A~~~g~~--- 229 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLAC-EADVNVQDDDGSTALMCACEHGHK--- 229 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCH---
T ss_pred HHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCH---
Confidence 6789999999999998 777888999999999999999999999998 999999999999999999999988
Q ss_pred CCccchhhcc---chhhHhhhcCCCCChhhhhHHHHH
Q 037666 174 QNPCGVENVV---PKKLAEAINTGGLTPTALFSEKHK 207 (375)
Q Consensus 174 ~~~~~v~~~L---~~~~~~~~n~~g~tpl~~a~~~~~ 207 (375)
+++++| .+++++.+|.+|+||+++|.+..+
T Consensus 230 ----~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 230 ----EIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp ----HHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ----HHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC
Confidence 787776 578899999999999999987643
No 66
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=2.2e-28 Score=205.87 Aligned_cols=153 Identities=17% Similarity=0.097 Sum_probs=135.2
Q ss_pred HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666 3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD 82 (375)
Q Consensus 3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 82 (375)
++.++...+.+++.. |..|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.+.+
T Consensus 18 v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 94 (172)
T 3v30_A 18 LKEHLRKGDNLVNKP-DERGFTPLIWASAFGEIETVRFLLEW--GADPHILAKERESALSLASTGGYTDIVGLLLERDVD 94 (172)
T ss_dssp HHHHHTTCSGGGGCC-CTTSCCHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred HHHHHHcCcccccCC-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 455555555557776 99999999999999999999999999 899999999999999999999999999999999999
Q ss_pred CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcH
Q 037666 83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETA 160 (375)
Q Consensus 83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~ 160 (375)
+ +.+|.+|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..++.++++.|+++ +.+...++..|.||
T Consensus 95 ~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~-~~~~~~~~~~~~~p 171 (172)
T 3v30_A 95 I-NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH-ILKLFQSNLVPADP 171 (172)
T ss_dssp T-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH-HHHHSCC-------
T ss_pred C-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH-HHHHhcccCCCCCC
Confidence 6 8899999999999999999999999999998 888999999999999999999999999998 88888888888887
No 67
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=2.2e-28 Score=217.42 Aligned_cols=175 Identities=12% Similarity=0.075 Sum_probs=124.1
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
+..|.||||.|++.|+.+.++.|+++ +.+++.. ..|.||||+|+..|+.++++.|++.++++ +.+|.+|.||||+|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~--g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAH--GMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNA 77 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhcc--CCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence 35699999999999999999999999 8888854 78999999999999999999999999986 88999999999999
Q ss_pred HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCC-cHHHHH--HHhcCCCCCC
Q 037666 99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEE-TALHVL--ARKNLTSSNQ 174 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~-T~Lh~A--~~~~~~~~~~ 174 (375)
+..|+.+++++|+++++ ++.+|.+|+||||+|+..|+.++++.|+++ |.+++.+|.+|. ||||+| +..++.
T Consensus 78 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~t~l~~a~~~~~g~~---- 152 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES-GAAVFAMTYSDMQTAADKCEEMEEGYT---- 152 (239)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHCCSSSTTCC----
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcceecCCCCcchHHHHHHhhhccH----
Confidence 99999999999999998 888999999999999999999999999998 999999998887 999999 666766
Q ss_pred Cccchhhcc--chhhHhhh---------cCCCCChhhhhHHH
Q 037666 175 NPCGVENVV--PKKLAEAI---------NTGGLTPTALFSEK 205 (375)
Q Consensus 175 ~~~~v~~~L--~~~~~~~~---------n~~g~tpl~~a~~~ 205 (375)
++.++| .+++.+.. +..+.++.+++.+.
T Consensus 153 ---~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~ 191 (239)
T 1ycs_B 153 ---QCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKE 191 (239)
T ss_dssp ---CHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCS
T ss_pred ---HHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccC
Confidence 788877 55666655 44567777766443
No 68
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=5.5e-27 Score=196.95 Aligned_cols=140 Identities=26% Similarity=0.233 Sum_probs=133.3
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
+++++|.++|.+++.. |.+|.||||+|+..|+.+++++|+++ +.+++..|..|+||||+|+..|+.+++++|++.++
T Consensus 28 ~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 104 (169)
T 2y1l_E 28 DEVRILMANGADVNAE-DASGWTPLHLAAFNGHLEIVEVLLKN--GADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGA 104 (169)
T ss_dssp HHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4678888899999987 99999999999999999999999999 89999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD 145 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~ 145 (375)
++ +.+|.+|.||||+|+..|+.+++++|++++. .+.+|..|+||||+|+.+++.+++++|++.
T Consensus 105 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 105 DV-NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 96 8899999999999999999999999999998 888999999999999999999999999875
No 69
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.6e-27 Score=197.13 Aligned_cols=141 Identities=16% Similarity=0.168 Sum_probs=132.3
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.+.|.++|.+++.. |..|+||||+|+. |+.+++++|+++ +.+++.+|..|+||||+|++.|+.+++++|++.++
T Consensus 19 ~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 94 (162)
T 1ihb_A 19 EQLTSLLQNNVNVNAQ-NGFGRTALQVMKL-GNPEIARRLLLR--GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQA 94 (162)
T ss_dssp HHHHHHTTSCCCTTCC-CTTSCCHHHHCCS-SCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCcccc-CccCccHHHHHHc-CcHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4567788899999987 9999999999999 999999999999 89999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc--CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCc
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK--GSLTDDECIELLVKLIETDLYAVALRLLKDRPQ 148 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~--~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~ 148 (375)
++ +.+|.+|.||||+|+..|+.+++++|++.++ .+.+|..|+||||+|+..|+.+++++|+++ |+
T Consensus 95 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-GA 161 (162)
T 1ihb_A 95 DV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN-GA 161 (162)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-C-
T ss_pred CC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh-CC
Confidence 96 8899999999999999999999999999998 478999999999999999999999999987 54
No 70
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=9.9e-28 Score=198.84 Aligned_cols=141 Identities=16% Similarity=0.030 Sum_probs=118.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCCh-HHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTL-PIVR 97 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~t-pLh~ 97 (375)
+..|.||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+ .|+.+++++|++.+.++ +.+|..|.| |||+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEA--GANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHD 84 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTT--TCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHH
Confidence 77899999999999999999999999 8999999999999999985 99999999999999996 889999999 9999
Q ss_pred HHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHH
Q 037666 98 AAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVL 164 (375)
Q Consensus 98 Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A 164 (375)
|+..|+.+++++|+++++ ++.+|.+|+||||+|+..|+.+++++|+++ |.+++.+|..|.||.+-+
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA-AGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC-C-----------------
T ss_pred HHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc-CCCCCccCcCcCcccccC
Confidence 999999999999999998 888999999999999999999999999988 999999999999998744
No 71
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=2.9e-27 Score=202.68 Aligned_cols=151 Identities=15% Similarity=0.049 Sum_probs=140.8
Q ss_pred hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhH
Q 037666 47 TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIE 125 (375)
Q Consensus 47 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t 125 (375)
+..++.+|..|+||||+|+..|+.++++.|++.++++ +.+|.+|.||||+|+..|+.+++++|++.++ ++.+|..|+|
T Consensus 25 ~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 103 (192)
T 2rfm_A 25 DFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT 103 (192)
T ss_dssp HHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCC
T ss_pred HHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCc
Confidence 3457889999999999999999999999999999886 8889999999999999999999999999998 8889999999
Q ss_pred HHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhH
Q 037666 126 LLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFS 203 (375)
Q Consensus 126 ~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~ 203 (375)
|||+|+..++.+++++|++. +.+++.+|.+|+||||+|+..++. ++.++| .+++++.+|..|.||+++|.
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRS-------EIVKKLLELGADISARDLTGLTAEASAR 175 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCH-------HHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCH-------HHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 99999999999999999998 999999999999999999999988 788877 67889999999999999987
Q ss_pred HHH
Q 037666 204 EKH 206 (375)
Q Consensus 204 ~~~ 206 (375)
...
T Consensus 176 ~~~ 178 (192)
T 2rfm_A 176 IFG 178 (192)
T ss_dssp HTT
T ss_pred HhC
Confidence 654
No 72
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.94 E-value=3e-27 Score=200.43 Aligned_cols=150 Identities=20% Similarity=0.144 Sum_probs=139.6
Q ss_pred HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666 3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD 82 (375)
Q Consensus 3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 82 (375)
++.+|...+.+++.. |..|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.+++
T Consensus 21 v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 97 (179)
T 3f6q_A 21 VRLWLDNTENDLNQG-DDHGFSPLHWACREGRSAVVEMLIMR--GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD 97 (179)
T ss_dssp HHHHHHCTTSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHhcCccccccc-CCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 455666668889887 99999999999999999999999999 899999999999999999999999999999999999
Q ss_pred CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCC
Q 037666 83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNE 157 (375)
Q Consensus 83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G 157 (375)
+ +.+|.+|.||||+|+..|+.+++++|+++++ ++.+|.+|+||||+|+..++.++++.|++. +.+++..+.++
T Consensus 98 ~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~-g~~~~~~~~~~ 171 (179)
T 3f6q_A 98 I-NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKM-GQNLNRIPYKD 171 (179)
T ss_dssp T-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT-TCCCSCBCCCC
T ss_pred C-CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh-hcCcccCCccc
Confidence 6 8899999999999999999999999999999 889999999999999999999999999988 88888777665
No 73
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=2.7e-27 Score=191.57 Aligned_cols=130 Identities=18% Similarity=0.088 Sum_probs=123.9
Q ss_pred ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCC
Q 037666 11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGD 90 (375)
Q Consensus 11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~ 90 (375)
+.+++.. |..|.||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+. |+.+++++|++.++++ +.+|..
T Consensus 2 ~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~ 76 (136)
T 1d9s_A 2 SPGIHML-GGSSDAGLATAAARGQVETVRQLLEA--GADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPA 76 (136)
T ss_dssp CCCCSCC-CCCCSCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTT
T ss_pred CCCccCC-CCCCccHHHHHHHcCCHHHHHHHHHc--CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCC
Confidence 4577887 89999999999999999999999999 89999999999999999999 9999999999999996 888999
Q ss_pred -CChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666 91 -GTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD 145 (375)
Q Consensus 91 -g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~ 145 (375)
|.||||+|+..|+.+++++|++.++ ++.+|..|+||||+|+.+++.+++++|+++
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999999999998 888999999999999999999999999987
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.4e-28 Score=218.63 Aligned_cols=187 Identities=16% Similarity=0.103 Sum_probs=145.6
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.+.|+++|++++. ++.|.||||.|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus 19 ~~~~~ll~~g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga 94 (239)
T 1ycs_B 19 KTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYE--VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGV 94 (239)
T ss_dssp --------------------CHHHHHHHHHHTCHHHHHHHTST--TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHhccCCCccc--CchhhHHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 356778889999985 57899999999999999999999999 78999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhh-HHHHHH--HhcCcHHHHHHHHhcCCcccccc----
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECI-ELLVKL--IETDLYAVALRLLKDRPQLATKR---- 153 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~-t~Lh~A--~~~~~~~~v~~LL~~~~~~~~~~---- 153 (375)
++ +.+|.+|+||||+|+..|+.+++++|+++++ ++..+..|. ||||+| +.+|+.++++.|++. +.+++..
T Consensus 95 ~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~-~a~~~~~~~~~ 172 (239)
T 1ycs_B 95 NV-NAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV-QEKMGIMNKGV 172 (239)
T ss_dssp CT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH-HHHTTTTGGGE
T ss_pred CC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh-hhcccccccce
Confidence 96 8899999999999999999999999999999 777777766 999999 788999999999988 6666554
Q ss_pred -----cCCCCcHHHHHHHhcCCCCCCCccchhhccchhh--------HhhhcCCCCChhhhhH
Q 037666 154 -----DRNEETALHVLARKNLTSSNQNPCGVENVVPKKL--------AEAINTGGLTPTALFS 203 (375)
Q Consensus 154 -----d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~~~--------~~~~n~~g~tpl~~a~ 203 (375)
|..|.++++++.+.| ++.+++...+ ....++.|.+|.++..
T Consensus 173 ~~al~d~~~~~~~eLa~~~G---------~~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~ 226 (239)
T 1ycs_B 173 IYALWDYEPQNDDELPMKEG---------DCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLG 226 (239)
T ss_dssp EEESSCBCCSSTTBCCBCSS---------CEEEECCCCTTSCSSEEEEEETTEEEEEEGGGEE
T ss_pred EEEEeccCCCCCCcccccCC---------CEEEEEEecCCCCCCEEEEEECCcEEEeehHHee
Confidence 677889999888877 4444442211 1245667888887754
No 75
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=1.9e-27 Score=221.35 Aligned_cols=156 Identities=11% Similarity=-0.015 Sum_probs=132.1
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCC---HHHHHHHHHcCChhhHhchhcCCChHHHHHHH----cCcHHHHH
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANC---IDFVKELLKMMSTEDLAKKNKIGCTAFFYAAG----SGMVEIVE 74 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~---~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~----~g~~~iv~ 74 (375)
+++++|+++|++++.+ |.+|+||||+|+..|+ .++++.|++.. .++++.+|..|+||||+|++ .|+.++++
T Consensus 145 ~~v~~Ll~~Gad~n~~-d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~-~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~ 222 (327)
T 1sw6_A 145 ELVKHLVKHGSNRLYG-DNMGESCLVKAVKSVNNYDSGTFEALLDYL-YPCLILEDSMNRTILHHIIITSGMTGCSAAAK 222 (327)
T ss_dssp HHHHHHHHTTCCTTBC-CTTCCCHHHHHHHSSHHHHTTCHHHHHHHH-GGGGGEECTTCCCHHHHHHHHHTSTTCHHHHH
T ss_pred HHHHHHHHcCCCCCCc-CCCCCCHHHHHHHhcccccHHHHHHHHHhh-hccccCCCCCCCCHHHHHHHHccccccHHHHH
Confidence 5788999999999987 9999999999999998 78899999984 47899999999999999999 99999999
Q ss_pred HHHcc--------------------CCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhccCCcccchhhHHHHHHHhcC
Q 037666 75 EAMKG--------------------NKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETD 134 (375)
Q Consensus 75 ~Ll~~--------------------~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~d~~g~t~Lh~A~~~~ 134 (375)
.|++. +.++ +.+|.+|.||||.|+. +++|++.+ ++.+|.+|+||||+|+++|
T Consensus 223 ~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~~g~t~L~~a~~------~~~Ll~~~-~n~~d~~G~TpLh~A~~~g 294 (327)
T 1sw6_A 223 YYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNGERKDSILENLD------LKWIIANM-LNAQDSNGDTCLNIAARLG 294 (327)
T ss_dssp HHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHHT-TTCCCTTSCCHHHHHHHHC
T ss_pred HHHHHHHHHHhcccchHHHhhhhcccCCc-ccccccCCChhHHHHH------HHHHHHhC-CCCCCCCCCCHHHHHHHcC
Confidence 99987 6665 7889999999999986 88999885 6888999999999999999
Q ss_pred cHHHHHHHHhcCCcccccccCCCCcHHHHHHHhc
Q 037666 135 LYAVALRLLKDRPQLATKRDRNEETALHVLARKN 168 (375)
Q Consensus 135 ~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~ 168 (375)
+.++++.|+++ |.+++.+|.+|+||||+|+++|
T Consensus 295 ~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 295 NISIVDALLDY-GADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CHHHHHHHHHT-TCCTTCCCTTSCCGGGGTCC--
T ss_pred CHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcC
Confidence 99999999988 9999999999999999998764
No 76
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=2e-26 Score=192.86 Aligned_cols=140 Identities=19% Similarity=0.132 Sum_probs=132.3
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.+.|.+.|.+++.. |..|.||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|++.++
T Consensus 17 ~~v~~ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (167)
T 3v31_A 17 LYLATRIEQENVINHT-DEEGFTPLMWAAAHGQIAVVEFLLQN--GADPQLLGKGRESALSLACSKGYTDIVKMLLDCGV 93 (167)
T ss_dssp HHHHHHHHHSSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCcCCC-CCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCC
Confidence 3566677788999987 99999999999999999999999999 89999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD 145 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~ 145 (375)
++ +.+|.+|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+..|+.+++++|+++
T Consensus 94 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (167)
T 3v31_A 94 DV-NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157 (167)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence 96 8899999999999999999999999999998 888999999999999999999999999987
No 77
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=2.4e-26 Score=189.67 Aligned_cols=136 Identities=21% Similarity=0.156 Sum_probs=126.9
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
++.+.|.++|.+++ .|..|.||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus 16 ~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 91 (153)
T 1awc_B 16 DEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRA--GVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGA 91 (153)
T ss_dssp HHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred HHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCC
Confidence 45677777888776 388999999999999999999999998 89999999999999999999999999999999999
Q ss_pred CCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHH
Q 037666 82 DIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRL 142 (375)
Q Consensus 82 ~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~L 142 (375)
++ +.+|.+|.||||+|+..|+.+++++|+++++ ++.+|.+|+||||+|+.+|+.+++++|
T Consensus 92 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 92 DV-NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 96 8899999999999999999999999999998 888999999999999999999999875
No 78
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=4e-27 Score=201.11 Aligned_cols=151 Identities=12% Similarity=0.060 Sum_probs=134.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCChhhHhchh-cCCChHHHHHHHcCcH----HHHHHHHccCCCCccccCCCCChHHH
Q 037666 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKKN-KIGCTAFFYAAGSGMV----EIVEEAMKGNKDIAMVPGGDGTLPIV 96 (375)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d-~~g~tpLh~Aa~~g~~----~iv~~Ll~~~~~~~~~~d~~g~tpLh 96 (375)
+.++||.|++.|+.+.++.+++. + ++..+ ..|+||||+|+..|+. +++++|++.|+++ +.+|.+|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~--~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEK--G--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHH--S--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhc--C--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHH
Confidence 56899999999999999999976 2 45555 7899999999999975 5999999999997 899999999999
Q ss_pred HHHHcCc------HHHHHHHHHhcc-CCcccchhh-HHHHHHHhc-----CcHHHHHHHHhcCCcccccccCCCCcHHHH
Q 037666 97 RAAALGQ------RQTVVLLYEKTK-GSLTDDECI-ELLVKLIET-----DLYAVALRLLKDRPQLATKRDRNEETALHV 163 (375)
Q Consensus 97 ~Aa~~g~------~~iv~~Ll~~~~-~~~~d~~g~-t~Lh~A~~~-----~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~ 163 (375)
+|+..|+ .+++++|+++|+ ++.+|.+|+ ||||+|+.. ++.++++.|++..|.+++.+|.+|+||||+
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~ 160 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEF 160 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHH
T ss_pred HHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHH
Confidence 9999987 688999999999 999999999 999999994 346788999984599999999999999999
Q ss_pred HHHhcCCCCCCCccchhhccc
Q 037666 164 LARKNLTSSNQNPCGVENVVP 184 (375)
Q Consensus 164 A~~~~~~~~~~~~~~v~~~L~ 184 (375)
|++.+++ +++++|.
T Consensus 161 A~~~~~~-------~~v~~L~ 174 (186)
T 3t8k_A 161 VKRCQKP-------IALKMME 174 (186)
T ss_dssp HHTTTCH-------HHHHHHH
T ss_pred HHHcCCH-------HHHHHHH
Confidence 9999988 8888873
No 79
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=9e-27 Score=194.62 Aligned_cols=151 Identities=21% Similarity=0.144 Sum_probs=136.7
Q ss_pred hhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHH
Q 037666 53 KNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLI 131 (375)
Q Consensus 53 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~ 131 (375)
.|.+|.||||.|++.|+.++++.|++.++......|..|.||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 567899999999999999999999997665557788899999999999999999999999998 8889999999999999
Q ss_pred hcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhhhHHHHHHH
Q 037666 132 ETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTALFSEKHKEL 209 (375)
Q Consensus 132 ~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~a~~~~~~l 209 (375)
..++.+++++|++. +.+++.+|.+|+||||+|+..++. ++.++| .+++++.+|.+|+||++++.+.+.++
T Consensus 84 ~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~i 155 (165)
T 3twr_A 84 SYGHYEVAELLVKH-GAVVNVADLWKFTPLHEAAAKGKY-------EICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDI 155 (165)
T ss_dssp HTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTSCCTGGGSCTTCHHH
T ss_pred HcCcHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCH-------HHHHHHHHcCCCCcccCCCCCChhHhHhcCChHH
Confidence 99999999999998 999999999999999999999988 788877 77889999999999999998876654
Q ss_pred HH
Q 037666 210 KR 211 (375)
Q Consensus 210 ~~ 211 (375)
++
T Consensus 156 ~~ 157 (165)
T 3twr_A 156 QD 157 (165)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 80
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=7.3e-29 Score=219.16 Aligned_cols=161 Identities=17% Similarity=0.108 Sum_probs=143.8
Q ss_pred HHHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCC
Q 037666 2 VAKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNK 81 (375)
Q Consensus 2 ~v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~ 81 (375)
+++++|.++|++++.. |.+|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++
T Consensus 35 ~~v~~Ll~~g~~~~~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~--ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga 111 (229)
T 2vge_A 35 EVVQQAVKEMNDPSQP-NEEGITALHNAICGANYSIVDFLITA--GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGA 111 (229)
T ss_dssp HHHHHHHHHSSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHHhcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 4667788899999997 99999999999999999999999999 89999999999999999999999999999999999
Q ss_pred CCccccC-CCCChHHHHH--HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcc--cccccC
Q 037666 82 DIAMVPG-GDGTLPIVRA--AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQL--ATKRDR 155 (375)
Q Consensus 82 ~~~~~~d-~~g~tpLh~A--a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~--~~~~d~ 155 (375)
++ +.++ .+|.||||+| +..|+.+++++|++.++ ++.+|..|.+++|.++..+.. +.+++. |.+ ++.+|.
T Consensus 112 ~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~---~~ll~~-ga~~~~~~~d~ 186 (229)
T 2vge_A 112 AI-FATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGD---ELSFRE-GESVTVLRRDG 186 (229)
T ss_dssp CT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTT---BCCBCT-TCEEEEEESSC
T ss_pred Cc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhcccc---ccCccc-cccccccccCC
Confidence 97 5554 6999999999 99999999999999999 888999999999976655433 344444 776 778999
Q ss_pred CCCcHHHHHHHhcCC
Q 037666 156 NEETALHVLARKNLT 170 (375)
Q Consensus 156 ~G~T~Lh~A~~~~~~ 170 (375)
+|+||||+|+++|+.
T Consensus 187 ~G~TpL~~A~~~g~~ 201 (229)
T 2vge_A 187 PEETDWWWAALHGQE 201 (229)
T ss_dssp TTCSSEEEEEETTEE
T ss_pred CcccHHHHHHHcCCc
Confidence 999999999999877
No 81
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=2.5e-26 Score=189.97 Aligned_cols=137 Identities=20% Similarity=0.239 Sum_probs=126.9
Q ss_pred HHHHHhhCccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCC
Q 037666 3 AKDIYDKYEDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKD 82 (375)
Q Consensus 3 v~~lL~~~~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~ 82 (375)
++.++...+.+++.. |..|+||||+ +..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.+++
T Consensus 18 v~~ll~~~~~~~~~~-~~~g~t~L~~-~~~~~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 93 (156)
T 1bd8_A 18 VRRLLHRELVHPDAL-NRFGKTALQV-MMFGSTAIALELLKQ--GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD 93 (156)
T ss_dssp HHHHHHTTCCCTTCC-CTTSCCHHHH-SCTTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHhhCcCcccc-CCCCCcHHHH-HHcCCHHHHHHHHHC--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 455555545688887 9999999999 999999999999999 899999999999999999999999999999999999
Q ss_pred CccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666 83 IAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD 145 (375)
Q Consensus 83 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~ 145 (375)
+ +.+|.+|.||||+|+..|+.+++++|++. . .+.+|.+|+||||+|+..|+.++++.|+++
T Consensus 94 ~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 94 V-NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp S-CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred C-CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 6 88999999999999999999999999999 6 888999999999999999999999999875
No 82
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.8e-25 Score=180.83 Aligned_cols=124 Identities=24% Similarity=0.187 Sum_probs=118.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
...|.||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A 87 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMAN--GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLA 87 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHH
Confidence 56789999999999999999999999 8999999999999999999999999999999999996 88999999999999
Q ss_pred HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666 99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD 145 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~ 145 (375)
+..|+.+++++|+++++ .+.+|.+|+||||+|+.+++.+++++|++.
T Consensus 88 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 99999999999999998 888999999999999999999999999875
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=5.3e-25 Score=174.70 Aligned_cols=124 Identities=28% Similarity=0.328 Sum_probs=118.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHH
Q 037666 21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAA 100 (375)
Q Consensus 21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 100 (375)
+|+||||+|+..|+.+++++|+++ +.+++..|..|.||||+|+..|+.+++++|++.+.++ +.+|..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc--CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHH
Confidence 589999999999999999999999 8899999999999999999999999999999999986 8899999999999999
Q ss_pred cCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCc
Q 037666 101 LGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQ 148 (375)
Q Consensus 101 ~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~ 148 (375)
.|+.+++++|++++. .+.+|.+|+||||+|+..++.+++++|+++ |+
T Consensus 78 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-Ga 125 (126)
T 1n0r_A 78 NGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GA 125 (126)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TC
T ss_pred cChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc-CC
Confidence 999999999999998 888999999999999999999999999987 54
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=6.4e-26 Score=187.90 Aligned_cols=143 Identities=13% Similarity=0.100 Sum_probs=114.8
Q ss_pred hHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhH-H
Q 037666 49 DLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIE-L 126 (375)
Q Consensus 49 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t-~ 126 (375)
..+..+..|.||||+|++.|+.+++++|++.+.++ +.+|..|+||||+|+ .|+.+++++|++.+. ++.+|..|+| |
T Consensus 4 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttp 81 (156)
T 1bi7_B 4 AAGSSMEPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRP 81 (156)
T ss_dssp ------CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCH
T ss_pred CccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 34567888999999999999999999999999986 889999999999985 999999999999998 8889999999 9
Q ss_pred HHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhhh
Q 037666 127 LVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTAL 201 (375)
Q Consensus 127 Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~~ 201 (375)
||+|+..|+.+++++|+++ |.+++.+|.+|+||||+|+..++. ++.++| .+++++.+|..|.||.+-
T Consensus 82 L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~-------~~v~~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHR-------DVARYLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCH-------HHHHHHSSCC----------------
T ss_pred HHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHH-------HHHHHHHHcCCCCCccCcCcCccccc
Confidence 9999999999999999998 999999999999999999999988 788877 789999999999999763
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=1.6e-25 Score=181.03 Aligned_cols=127 Identities=13% Similarity=0.087 Sum_probs=119.7
Q ss_pred hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccch-hh
Q 037666 47 TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDE-CI 124 (375)
Q Consensus 47 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~-g~ 124 (375)
+.+++.+|..|.||||+|++.|+.+++++|++.+.++ +.+|..|+||||+|+. |+.+++++|+++++ ++.+|.. |+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 3568889999999999999999999999999999986 8899999999999999 99999999999998 8889999 99
Q ss_pred HHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666 125 ELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV 183 (375)
Q Consensus 125 t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L 183 (375)
||||+|+..|+.+++++|++. +.+++.+|.+|+||||+|++.++. ++.++|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~-------~~~~~L 130 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRA-GARLDVCDAWGRLPVDLAEEQGHR-------DIARYL 130 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHT-CCCCCCCSSSSSCHHHHHHHHTCH-------HHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCH-------HHHHHH
Confidence 999999999999999999988 899999999999999999999977 787776
No 86
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=1.4e-25 Score=181.63 Aligned_cols=129 Identities=21% Similarity=0.169 Sum_probs=111.7
Q ss_pred ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCC
Q 037666 11 EDEIGQEITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGD 90 (375)
Q Consensus 11 ~~~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~ 90 (375)
|+|+ . .|.+|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.+.++ +.+|.+
T Consensus 1 G~d~-~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~ 75 (137)
T 3c5r_A 1 GIDP-F-TNHRGETLLHIASIKGDIPSVEYLLQN--GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQ 75 (137)
T ss_dssp ---C-C-CCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGG
T ss_pred CCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCC
Confidence 4455 3 388999999999999999999999998 8889999999999999999999999999999999886 788999
Q ss_pred CChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHh
Q 037666 91 GTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLK 144 (375)
Q Consensus 91 g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~ 144 (375)
|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..+..++++.+.+
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 9999999999999999999999988 88889999999999998888777755544
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=1.4e-24 Score=175.55 Aligned_cols=125 Identities=17% Similarity=0.084 Sum_probs=116.1
Q ss_pred hHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHH
Q 037666 49 DLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELL 127 (375)
Q Consensus 49 ~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~L 127 (375)
++ .+|.+|+||||+|+..|+.+++++|++.++++ +.+|..|.||||+|+..|+.+++++|++.+. ++.+|..|+|||
T Consensus 3 d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 80 (137)
T 3c5r_A 3 DP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPL 80 (137)
T ss_dssp -C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHH
T ss_pred CC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHH
Confidence 44 67899999999999999999999999999986 8899999999999999999999999999998 888999999999
Q ss_pred HHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666 128 VKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV 183 (375)
Q Consensus 128 h~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L 183 (375)
|+|+..++.+++++|++. |.+++.+|.+|+||||+|+..+.. ++.+++
T Consensus 81 ~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~-------~~l~~l 128 (137)
T 3c5r_A 81 HDAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDDESMK-------SLLLLP 128 (137)
T ss_dssp HHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCCHHHH-------HHHSCC
T ss_pred HHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhccHH-------HHHhhc
Confidence 999999999999999988 999999999999999999988766 666666
No 88
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=8.8e-25 Score=191.67 Aligned_cols=135 Identities=20% Similarity=0.197 Sum_probs=111.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHcc-CCCCccccCCCCChHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKG-NKDIAMVPGGDGTLPIVR 97 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~~~~~~~d~~g~tpLh~ 97 (375)
|.+|.||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+..|+.+++++|++. +.++ +.+|.+|.||||+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDN--RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHA 146 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhC--CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHH
Confidence 66789999999999999999999998 889999999999999999999999999999998 7775 8899999999999
Q ss_pred HHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCC
Q 037666 98 AAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNE 157 (375)
Q Consensus 98 Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G 157 (375)
|+..|+.+++++|+++++ ++.+|.+|+||||+|+..++.++++.++.. +...+.+|.+|
T Consensus 147 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~-~~~~~~~~~~~ 206 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGT-DAVRTLSNAED 206 (222)
T ss_dssp HHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhcc-chhhhccchhh
Confidence 999999999999999998 888999999999999999999999988887 66666555543
No 89
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=2.4e-24 Score=170.90 Aligned_cols=116 Identities=22% Similarity=0.267 Sum_probs=99.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
+..|.||||+|+..|+.+++++|++. +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|+||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK--GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc--CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHH
Confidence 56788999999999999999999998 7889999999999999999999999999999999886 88899999999999
Q ss_pred HHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHH
Q 037666 99 AALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYA 137 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~ 137 (375)
+..|+.+++++|+++++ ++.+|.+|+||||+|...+..+
T Consensus 81 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 99999999999999888 7778888888888885544433
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.90 E-value=1.3e-24 Score=184.87 Aligned_cols=136 Identities=21% Similarity=0.163 Sum_probs=99.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccC-CCCChHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPG-GDGTLPIVR 97 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~ 97 (375)
+.+|+||||+|+..|+.++++.|++ +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+| .+|.||||+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT---TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh---cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHH
Confidence 4467788888888888888888776 3567777777888888888888888888888877775 5555 777888888
Q ss_pred HHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCc
Q 037666 98 AAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNP 176 (375)
Q Consensus 98 Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~ 176 (375)
|+..|+.+++++|+++++ ++.+|.+|+||||+|++.++ ...+.|+|++|++.+..
T Consensus 117 A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~------------------~~~~~~~l~~a~~~~~~------ 172 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLE------ 172 (183)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHH------------------TCCCCSHHHHHHHHHHH------
T ss_pred HHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhcc------------------CcccccHHHHHHHcCHH------
Confidence 888888888888877777 66777777777777776431 13556777777777665
Q ss_pred cchhhcc
Q 037666 177 CGVENVV 183 (375)
Q Consensus 177 ~~v~~~L 183 (375)
++.++|
T Consensus 173 -~i~~~L 178 (183)
T 3deo_A 173 -KVINVL 178 (183)
T ss_dssp -HHHHHH
T ss_pred -HHHHHH
Confidence 566555
No 91
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=6.2e-25 Score=187.52 Aligned_cols=137 Identities=12% Similarity=0.007 Sum_probs=119.6
Q ss_pred cccccCCCCCcHHHHHHHcCCH----HHHHHHHHcCChhhHhchhcCCChHHHHHHHcCc------HHHHHHHHccCCCC
Q 037666 14 IGQEITNLGNTALHVAAQANCI----DFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGM------VEIVEEAMKGNKDI 83 (375)
Q Consensus 14 ~~~~~d~~g~tpLh~A~~~g~~----~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~------~~iv~~Ll~~~~~~ 83 (375)
++...|..|+||||+|+..|+. +++++|+++ |++++.+|.+|+||||+|+..|+ .+++++|++.|+++
T Consensus 30 ~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~--Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi 107 (186)
T 3t8k_A 30 YEDKESVLKSNILYDVLRNNNDEARYKISMFLINK--GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI 107 (186)
T ss_dssp SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT--TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS
T ss_pred cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC--CCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC
Confidence 4444237799999999999985 599999999 89999999999999999999887 68899999999997
Q ss_pred ccccCCCCC-hHHHHHHHcC-----cHHHHHHHHH-hcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCccccccc
Q 037666 84 AMVPGGDGT-LPIVRAAALG-----QRQTVVLLYE-KTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRD 154 (375)
Q Consensus 84 ~~~~d~~g~-tpLh~Aa~~g-----~~~iv~~Ll~-~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d 154 (375)
+.+|.+|. ||||+|+..+ +.+++++|++ .++ ++.+|..|+||||+|++.++.++++.|+.. ....+.+|
T Consensus 108 -n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~-~~~~~~~~ 184 (186)
T 3t8k_A 108 -TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY-IKKYNLKE 184 (186)
T ss_dssp -SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH-HHHHTCCC
T ss_pred -CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH-HHHHhccc
Confidence 89999999 9999999944 4679999999 888 999999999999999999999999998876 33344443
No 92
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=4.5e-25 Score=208.37 Aligned_cols=158 Identities=15% Similarity=0.033 Sum_probs=130.6
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhh---HhchhcCCChHHHHHHHcCcHHHHHHHHccCCCC--ccccCCCCCh
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTED---LAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDI--AMVPGGDGTL 93 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~---~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~--~~~~d~~g~t 93 (375)
+.+++||||+|++.|+.++|++|+++ +.. .+..|..|.||||+|++.|+.++|++|++.+++. .+..+.+ .|
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~--ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~T 165 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLL--LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YH 165 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC----CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHc--CCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CC
Confidence 55678999999999999999999998 541 2234556789999999999999999999999752 1223333 99
Q ss_pred HHHHHHHcCcHHHHHHHHHhcc-CCc--ccchhhHHHHHHH-hcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcC
Q 037666 94 PIVRAAALGQRQTVVLLYEKTK-GSL--TDDECIELLVKLI-ETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNL 169 (375)
Q Consensus 94 pLh~Aa~~g~~~iv~~Ll~~~~-~~~--~d~~g~t~Lh~A~-~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~ 169 (375)
|||+|+.+|+.+++++|+++++ .+. .|.+|.||||+|+ .+|+.+++++|++. |. +|+||||+|+++|+
T Consensus 166 pLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~-ga-------~~~taL~~Aa~~g~ 237 (376)
T 2aja_A 166 AFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC-PV-------MLAYAEIHEFEYGE 237 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS-HH-------HHHHHHHCTTTTTT
T ss_pred HHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC-CC-------ccchHHHHHHHCCC
Confidence 9999999999999999999998 555 8889999999999 99999999999985 43 38999999999998
Q ss_pred CCCCCCccchhhcc--chhhHhhhcCC
Q 037666 170 TSSNQNPCGVENVV--PKKLAEAINTG 194 (375)
Q Consensus 170 ~~~~~~~~~v~~~L--~~~~~~~~n~~ 194 (375)
. +++++| .+++++.++..
T Consensus 238 ~-------evv~lL~~~ga~~~~~~~~ 257 (376)
T 2aja_A 238 K-------YVNPFIARHVNRLKEMHDA 257 (376)
T ss_dssp T-------THHHHHHHHHHHHHHHHTT
T ss_pred H-------HHHHHHHhcCcccccccHH
Confidence 8 888888 56666666543
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=6.4e-24 Score=195.07 Aligned_cols=139 Identities=14% Similarity=0.034 Sum_probs=121.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCChhhHhc------hhcCCChHHHHHHHc---CcHHHHHHHHccCCCCccccCCCCC
Q 037666 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAK------KNKIGCTAFFYAAGS---GMVEIVEEAMKGNKDIAMVPGGDGT 92 (375)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~------~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~g~ 92 (375)
+.++||.|+..|+.+.++.|++. +.+++. .|..|+||||+|+.. |+.+++++|++.++++ +.+|.+|+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~ 227 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGN 227 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhc--CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCC
Confidence 45789999999999999999988 788887 688999999999997 8999999999999996 88999999
Q ss_pred hHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCC
Q 037666 93 LPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLT 170 (375)
Q Consensus 93 tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~ 170 (375)
||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..++.+++++|++. +.+ .|.||||+|++.|+.
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~-ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA-QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHH-HHH------TTSSCCC--------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-cCC------CCCChhHHHHhcCCc
Confidence 99999999999999999999999 889999999999999999999999999987 432 689999999998864
No 94
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=1e-23 Score=170.41 Aligned_cols=123 Identities=18% Similarity=0.128 Sum_probs=113.6
Q ss_pred chhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHH
Q 037666 52 KKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKL 130 (375)
Q Consensus 52 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A 130 (375)
.....|.||||+|++.|+.++++.|++.++++ +.+|.+|.||||+|+..|+.+++++|++.++ ++..|.+|+||||+|
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 34567899999999999999999999999996 8899999999999999999999999999998 888999999999999
Q ss_pred HhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666 131 IETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV 183 (375)
Q Consensus 131 ~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L 183 (375)
+..++.+++++|+++ +.+++.+|.+|+||||+|++.++. ++.++|
T Consensus 88 ~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~~~-------~~~~~L 132 (136)
T 2jab_A 88 AFIGHLEIAEVLLKH-GADVNAQDKFGKTAFDISIGNGNE-------DLAEIL 132 (136)
T ss_dssp HHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHH
T ss_pred HHcCCHHHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCCCH-------HHHHHH
Confidence 999999999999998 999999999999999999999977 777765
No 95
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.89 E-value=9.5e-25 Score=206.14 Aligned_cols=186 Identities=11% Similarity=0.032 Sum_probs=133.3
Q ss_pred HHHHHHhhCccccc--cccCCCCCcHHHHHHHcCCHHHHHHHHHcCChhh---HhchhcCCChHHHHHHHcCcHHHHHHH
Q 037666 2 VAKDIYDKYEDEIG--QEITNLGNTALHVAAQANCIDFVKELLKMMSTED---LAKKNKIGCTAFFYAAGSGMVEIVEEA 76 (375)
Q Consensus 2 ~v~~lL~~~~~~~~--~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~---~~~~d~~g~tpLh~Aa~~g~~~iv~~L 76 (375)
+++++|.++|.... ...|..|+||||+|+..|+.++|++|+++ +++ .+..+.+ .||||+|++.|+.+++++|
T Consensus 106 e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~--gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~L 182 (376)
T 2aja_A 106 SALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL--APTEIMAMIQAEN-YHAFRLAAENGHLHVLNRL 182 (376)
T ss_dssp HHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS--CTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC--CCCccccccCCCC-CCHHHHHHHCCCHHHHHHH
Confidence 46777888887211 01245688999999999999999999999 543 2333333 9999999999999999999
Q ss_pred HccCCCCccc--cCCCCChHHHHHH-HcCcHHHHHHHHHhccCCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccc--
Q 037666 77 MKGNKDIAMV--PGGDGTLPIVRAA-ALGQRQTVVLLYEKTKGSLTDDECIELLVKLIETDLYAVALRLLKDRPQLAT-- 151 (375)
Q Consensus 77 l~~~~~~~~~--~d~~g~tpLh~Aa-~~g~~~iv~~Ll~~~~~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~-- 151 (375)
++.+++. +. +|.+|.||||+|+ .+|+.+++++|++.+ ..|+||||.|+++|+.+++++|++. +.+++
T Consensus 183 l~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g------a~~~taL~~Aa~~g~~evv~lL~~~-ga~~~~~ 254 (376)
T 2aja_A 183 CELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP------VMLAYAEIHEFEYGEKYVNPFIARH-VNRLKEM 254 (376)
T ss_dssp HHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH------HHHHHHHHCTTTTTTTTHHHHHHHH-HHHHHHH
T ss_pred HHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC------CccchHHHHHHHCCCHHHHHHHHhc-Ccccccc
Confidence 9999986 55 7888999999999 999999999999865 3589999999999999999888875 22221
Q ss_pred -----------------------------------------------------------cccCCCCcHHHHHHHhcCCCC
Q 037666 152 -----------------------------------------------------------KRDRNEETALHVLARKNLTSS 172 (375)
Q Consensus 152 -----------------------------------------------------------~~d~~G~T~Lh~A~~~~~~~~ 172 (375)
..++.++||||+|++.|+.
T Consensus 255 ~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~-- 332 (376)
T 2aja_A 255 HDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQ-- 332 (376)
T ss_dssp HTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCT--
T ss_pred cHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcH--
Confidence 1224566778888888777
Q ss_pred CCCccchhhccchhhHhhhcCCCCChhhhhHHHH
Q 037666 173 NQNPCGVENVVPKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 173 ~~~~~~v~~~L~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
+++++|.+. ...++..|+||++++..++
T Consensus 333 -----e~v~lLl~~-~~v~~~~~~~~~~~~~~~~ 360 (376)
T 2aja_A 333 -----GACALLLSI-PSVLALTKANNYYINETGG 360 (376)
T ss_dssp -----THHHHHTTS-HHHHHSCC-----------
T ss_pred -----HHHHHHHcC-hHHHHHHHHhccccccccc
Confidence 677766332 3556677778877765543
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=3.4e-24 Score=190.98 Aligned_cols=137 Identities=20% Similarity=0.172 Sum_probs=115.0
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccC-CCCChHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPG-GDGTLPIVR 97 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~ 97 (375)
+.+|+||||+|+..|+.++++.|++ +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+| ..|.||||+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~---~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE---DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT---TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc---CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHH
Confidence 3468899999999999999999997 3678888999999999999999999999999998886 5666 779999999
Q ss_pred HHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCc
Q 037666 98 AAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNP 176 (375)
Q Consensus 98 Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~ 176 (375)
|+..|+.+++++|+++++ ++.+|.+|+||||+|+..+ .+..|.||||+|++.|+.
T Consensus 118 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~------------------~~~~~~~~l~~a~~~g~~------ 173 (244)
T 3ui2_A 118 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL------------------KTTPKGNPMQFGRRIGLE------ 173 (244)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH------------------TTCCCSSHHHHHHHHHHH------
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH------------------hccCCCCHHHHHHHcChH------
Confidence 999999999999999888 8888899999999988632 235778999999988877
Q ss_pred cchhhccc
Q 037666 177 CGVENVVP 184 (375)
Q Consensus 177 ~~v~~~L~ 184 (375)
++.++|.
T Consensus 174 -~iv~~L~ 180 (244)
T 3ui2_A 174 -KVINVLE 180 (244)
T ss_dssp -HHHHHHH
T ss_pred -HHHHHHH
Confidence 7777763
No 97
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=3.4e-23 Score=164.16 Aligned_cols=119 Identities=25% Similarity=0.281 Sum_probs=112.7
Q ss_pred CCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcC
Q 037666 56 IGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETD 134 (375)
Q Consensus 56 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~ 134 (375)
+|+||||+|++.|+.++++.|++.++++ +.+|..|.||||+|+..|+.+++++|++.+. ++.+|..|+||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC
Confidence 5899999999999999999999999986 8889999999999999999999999999998 8889999999999999999
Q ss_pred cHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc
Q 037666 135 LYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV 183 (375)
Q Consensus 135 ~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L 183 (375)
+.+++++|+++ +.+++.+|.+|+||||+|++.++. ++.++|
T Consensus 80 ~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~-------~~~~~L 120 (126)
T 1n0r_A 80 HLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHL-------EVVKLL 120 (126)
T ss_dssp CHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHH
T ss_pred hHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCcH-------HHHHHH
Confidence 99999999998 999999999999999999999877 777776
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=2.6e-24 Score=191.70 Aligned_cols=160 Identities=16% Similarity=0.042 Sum_probs=136.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
...+.+++.+++..|+.+.++.+... +.+ .+.+|.||||+|++.|+.++++.|++ +.++ +.+|.+|+||||+|
T Consensus 12 ~~~~~~~~l~~~~~g~~~~~~~~~~~--~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A 84 (244)
T 3ui2_A 12 AGEGAMEYLIEWKDGHSPSWVPSSYI--AAD---VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFV 84 (244)
T ss_dssp ETTTEEEEEEEESSCCCCEEEEGGGS--CHH---HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHH
T ss_pred cCCCccHHHHHHHcCCCccccccccc--ccc---cccCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHH
Confidence 34567777788888876665554444 333 34678999999999999999999999 8875 88999999999999
Q ss_pred HHcCcHHHHHHHHHhcc-CCccc-chhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCc
Q 037666 99 AALGQRQTVVLLYEKTK-GSLTD-DECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNP 176 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~-~~~~d-~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~ 176 (375)
+..|+.+++++|+++++ ++.+| ..|+||||+|+.+|+.++++.|+++ |.+++.+|.+|+||||+|++.+..
T Consensus 85 ~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~l~~A~~~~~~------ 157 (244)
T 3ui2_A 85 AGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILKT------ 157 (244)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHHTT------
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHHHhc------
Confidence 99999999999999999 77777 8899999999999999999999998 999999999999999999987532
Q ss_pred cchhhccchhhHhhhcCCCCChhhhhHHHHHH
Q 037666 177 CGVENVVPKKLAEAINTGGLTPTALFSEKHKE 208 (375)
Q Consensus 177 ~~v~~~L~~~~~~~~n~~g~tpl~~a~~~~~~ 208 (375)
..+.||++++.+....
T Consensus 158 ----------------~~~~~~l~~a~~~g~~ 173 (244)
T 3ui2_A 158 ----------------TPKGNPMQFGRRIGLE 173 (244)
T ss_dssp ----------------CCCSSHHHHHHHHHHH
T ss_pred ----------------cCCCCHHHHHHHcChH
Confidence 4678999998776543
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=2.5e-23 Score=165.03 Aligned_cols=113 Identities=19% Similarity=0.175 Sum_probs=104.2
Q ss_pred hhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHH
Q 037666 53 KNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLI 131 (375)
Q Consensus 53 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~ 131 (375)
.+..|.||||+|+..|+.++++.|++.++++ +.+|.+|+||||+|+..|+.+++++|++.+. ++.+|.+|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3567899999999999999999999999986 8899999999999999999999999999998 8889999999999999
Q ss_pred hcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHh
Q 037666 132 ETDLYAVALRLLKDRPQLATKRDRNEETALHVLARK 167 (375)
Q Consensus 132 ~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~ 167 (375)
..++.++++.|+++ +.+++.+|.+|+||||+|...
T Consensus 82 ~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 82 YEGHVSCVKLLLSK-GADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCCCH
T ss_pred HcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHhCCH
Confidence 99999999999998 999999999999999999544
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=9.8e-23 Score=173.26 Aligned_cols=130 Identities=18% Similarity=0.059 Sum_probs=117.6
Q ss_pred hhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCccc-chhhHHHHHH
Q 037666 53 KNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTD-DECIELLVKL 130 (375)
Q Consensus 53 ~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d-~~g~t~Lh~A 130 (375)
.|.+|.||||+|++.|+.++++.|++ +.++ +.+|.+|+||||+|+..|+.+++++|++.++ ++.+| .+|+||||+|
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHH
Confidence 46789999999999999999999999 8775 8899999999999999999999999999998 77777 8899999999
Q ss_pred HhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccchhhHhhhcCCCCChhhhhHHHHH
Q 037666 131 IETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKHK 207 (375)
Q Consensus 131 ~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~~~~~~~n~~g~tpl~~a~~~~~ 207 (375)
+..|+.++++.|+++ |.+++.+|.+|+||||+|++.+.. ..+.+|++++.+...
T Consensus 118 ~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~----------------------~~~~~~l~~a~~~~~ 171 (183)
T 3deo_A 118 AGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILKT----------------------TPKGNPMQFGRRIGL 171 (183)
T ss_dssp HHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHHHT----------------------CCCCSHHHHHHHHHH
T ss_pred HhcCcHHHHHHHHHc-CCCCcCCCCCCCCHHHHHHHhccC----------------------cccccHHHHHHHcCH
Confidence 999999999999998 999999999999999999988633 356788888776643
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=1.9e-23 Score=183.20 Aligned_cols=168 Identities=11% Similarity=0.066 Sum_probs=130.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcC-------------ChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCcc
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMM-------------STEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAM 85 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~-------------~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~ 85 (375)
|.+++++.+++.+.|+...+..+.+.. +...++..|.+|.||||+|+..|+.++++.|++.+.++ +
T Consensus 22 d~~~~~~~el~~~~Gd~~~v~~~~~~~w~~~~~~g~~gl~p~~~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~ 100 (222)
T 3ehr_A 22 TFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-N 100 (222)
T ss_dssp CCCCSSTTBCCCCTTCEEEEEECCSSSEEEEEETTEEEEEEHHHHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-T
T ss_pred CcCCCCCCcccccCCCEEEEeccccchhHhcccCCcceeechhhccccccccccccccccccCcHHHHHHHHhCCCCc-c
Confidence 556677777777666643332221110 01235667888999999999999999999999999996 8
Q ss_pred ccCCCCChHHHHHHHcCcHHHHHHHHHh-cc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHH
Q 037666 86 VPGGDGTLPIVRAAALGQRQTVVLLYEK-TK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHV 163 (375)
Q Consensus 86 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~-~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~ 163 (375)
.+|..|.||||+|+..|+.+++++|++. +. ++.+|.+|+||||+|+..|+.+++++|+++ |.+++.+|.+|+||||+
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~ 179 (222)
T 3ehr_A 101 GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK-GARTDLRNIEKKLAFDM 179 (222)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCSCCCCTTSCCHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCCHHHH
Confidence 8999999999999999999999999998 66 888999999999999999999999999999 99999999999999999
Q ss_pred HHHhcCCCCCCCccchhhcc--chhhHhhhcCCC
Q 037666 164 LARKNLTSSNQNPCGVENVV--PKKLAEAINTGG 195 (375)
Q Consensus 164 A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g 195 (375)
|+..+.. ++.+.+ .++..+.+|.+|
T Consensus 180 A~~~~~~-------~~l~~l~~~~~~~~~~~~~~ 206 (222)
T 3ehr_A 180 ATNAACA-------SLLKKKQGTDAVRTLSNAED 206 (222)
T ss_dssp CCSHHHH-------HHHC----------------
T ss_pred hcchhHH-------HHHHHHhccchhhhccchhh
Confidence 9998876 676666 445555555444
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=6.8e-22 Score=148.71 Aligned_cols=92 Identities=33% Similarity=0.444 Sum_probs=85.5
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHH
Q 037666 21 LGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAA 100 (375)
Q Consensus 21 ~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~ 100 (375)
+|+||||+|+..|+.+++++|+++ +.+++.+|.+|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHH
Confidence 489999999999999999999999 8999999999999999999999999999999999996 8899999999999999
Q ss_pred cCcHHHHHHHHHhcc
Q 037666 101 LGQRQTVVLLYEKTK 115 (375)
Q Consensus 101 ~g~~~iv~~Ll~~~~ 115 (375)
.|+.+++++|++.++
T Consensus 78 ~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGA 92 (93)
T ss_dssp TTCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999999998874
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=4.7e-22 Score=187.08 Aligned_cols=145 Identities=17% Similarity=0.151 Sum_probs=116.4
Q ss_pred CCCCcHHHHHHHc-CCHHHHHHHHHcCChhhHhchh--cCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHH
Q 037666 20 NLGNTALHVAAQA-NCIDFVKELLKMMSTEDLAKKN--KIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIV 96 (375)
Q Consensus 20 ~~g~tpLh~A~~~-g~~~~v~~Ll~~~~~~~~~~~d--~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh 96 (375)
..+.||||.|+.. |+.++++.|+++ +.+++..| ..|.||||+|+..|+.+++++|++.++++ +.+|.+|+||||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~--Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh 273 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAH--GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLH 273 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHT--TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHc--CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHH
Confidence 3456899999999 999999999999 89999888 89999999999999999999999999997 889999999999
Q ss_pred HHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc--CCcccccccCCCCcHHHHHHHh
Q 037666 97 RAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD--RPQLATKRDRNEETALHVLARK 167 (375)
Q Consensus 97 ~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~--~~~~~~~~d~~G~T~Lh~A~~~ 167 (375)
+|+..|+.+++++|+++++ ++.+|.+|+||||+|+..++.+++++|+.. .+......+..+.|+++++...
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------------------
T ss_pred HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHH
Confidence 9999999999999999999 889999999999999999999999999876 2334445677888999887665
No 104
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.85 E-value=3.8e-21 Score=176.50 Aligned_cols=137 Identities=15% Similarity=0.028 Sum_probs=118.9
Q ss_pred CChHHHHHHHcCcHHHHHHHHccCCCCccc------cCCCCChHHHHHHHc---CcHHHHHHHHHhcc-CCcccchhhHH
Q 037666 57 GCTAFFYAAGSGMVEIVEEAMKGNKDIAMV------PGGDGTLPIVRAAAL---GQRQTVVLLYEKTK-GSLTDDECIEL 126 (375)
Q Consensus 57 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~------~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~-~~~~d~~g~t~ 126 (375)
+.++||.|+..|+.+.++.|++.++++ +. .|..|+||||+|+.. |+.+++++|++.++ ++.+|.+|+||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCH
Confidence 446799999999999999999999986 44 688999999999997 89999999999999 88899999999
Q ss_pred HHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccchhhHhhhcCCCCChhhhhHHHH
Q 037666 127 LVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPKKLAEAINTGGLTPTALFSEKH 206 (375)
Q Consensus 127 Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~~~~~~~n~~g~tpl~~a~~~~ 206 (375)
||+|+..|+.++++.|++. |.+++.+|.+|+||||+|+..++. +++++|.....+ .|.||+++|.+..
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~~~~-------~iv~~Ll~~ga~----~g~tpLh~A~~~g 297 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHK-------ECEELLEQAQAG----TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHT-TCCCSCCCTTSCCHHHHHHHHTCH-------HHHHHHHHHHHH----TTSSCCC------
T ss_pred HHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCH-------HHHHHHHHhcCC----CCCChhHHHHhcC
Confidence 9999999999999999998 999999999999999999999988 888888443322 6899999987653
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=3.4e-21 Score=189.12 Aligned_cols=136 Identities=14% Similarity=0.036 Sum_probs=116.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCChhhHhch------hcCCChHHHHHHH---cCcHHHHHHHHccCCCCccccCCCCC
Q 037666 22 GNTALHVAAQANCIDFVKELLKMMSTEDLAKK------NKIGCTAFFYAAG---SGMVEIVEEAMKGNKDIAMVPGGDGT 92 (375)
Q Consensus 22 g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~------d~~g~tpLh~Aa~---~g~~~iv~~Ll~~~~~~~~~~d~~g~ 92 (375)
..+.||.|+..|+.+.++.|++. +.+++.. |..|+||||+|++ .|+.+++++|++.|+++ +.+|.+|+
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~--g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~ 208 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGN 208 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHT--TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSC
T ss_pred cHHHHHHHHhccCHHHHHHHHhh--cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCC
Confidence 34789999999999999999999 8888877 8899999999966 99999999999999997 89999999
Q ss_pred hHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHh
Q 037666 93 LPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARK 167 (375)
Q Consensus 93 tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~ 167 (375)
||||+|+..|+.+++++|+++++ ++.+|.+|+||||+|+..|+.++++.|++. |++++. ||+|.+...
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~~~------~~~h~~~~~ 277 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA-QAGTFA------FPLHVDYSW 277 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHT-CC-------------------
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-CCCCCC------Ccceeeccc
Confidence 99999999999999999999999 899999999999999999999999999998 777765 577766543
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=2.4e-21 Score=175.81 Aligned_cols=120 Identities=15% Similarity=0.057 Sum_probs=107.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCChhh------HhchhcCCChHHHHHHHc---CcHHHHHHHHccCCCCccccCCCCCh
Q 037666 23 NTALHVAAQANCIDFVKELLKMMSTED------LAKKNKIGCTAFFYAAGS---GMVEIVEEAMKGNKDIAMVPGGDGTL 93 (375)
Q Consensus 23 ~tpLh~A~~~g~~~~v~~Ll~~~~~~~------~~~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~~~~~~~d~~g~t 93 (375)
.++||.|+..|+.+.++.+++. +.+ ++..|..|+||||+|+.. |+.+++++|++.++++ +.+|.+|+|
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~--g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~T 207 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYAD--GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT--TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCCC
T ss_pred hhhhhhHhhhcccHHHHHHHHh--hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCCC
Confidence 4689999999999999999988 666 444578899999999998 8999999999999986 888999999
Q ss_pred HHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHHHHHHhc
Q 037666 94 PIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVALRLLKD 145 (375)
Q Consensus 94 pLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v~~LL~~ 145 (375)
|||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..|+.++++.|++.
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 9999999999999999999998 888999999999999999999999999887
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=2.2e-21 Score=151.79 Aligned_cols=104 Identities=30% Similarity=0.306 Sum_probs=71.7
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRA 98 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 98 (375)
|.+|+||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSK--GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLA 82 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTT--TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHH
Confidence 66777777777777777777777776 6667777777777777777777777777777777765 66677777777777
Q ss_pred HHcCcHHHHHHHHHhcc-CCcccchhhH
Q 037666 99 AALGQRQTVVLLYEKTK-GSLTDDECIE 125 (375)
Q Consensus 99 a~~g~~~iv~~Ll~~~~-~~~~d~~g~t 125 (375)
+..|+.+++++|+++++ ++.++..|.+
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~ 110 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARSWGSSH 110 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHSCCCC-
T ss_pred HHCCCHHHHHHHHHcCCCCCcCCccccc
Confidence 77777777777766665 4444444443
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=8e-21 Score=178.67 Aligned_cols=144 Identities=15% Similarity=0.120 Sum_probs=113.7
Q ss_pred hhcCCChHHHHHHHc-CcHHHHHHHHccCCCCccccC--CCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHH
Q 037666 53 KNKIGCTAFFYAAGS-GMVEIVEEAMKGNKDIAMVPG--GDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLV 128 (375)
Q Consensus 53 ~d~~g~tpLh~Aa~~-g~~~iv~~Ll~~~~~~~~~~d--~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh 128 (375)
.+..+.||||.|+.. |+.++++.|++.++++ +..| .+|.||||+|+..|+.+++++|+++++ ++..|.+|+||||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLH 273 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 344567899999999 9999999999999997 7777 889999999999999999999999999 8899999999999
Q ss_pred HHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccch-----hhHhhhcCCCCChhhhhH
Q 037666 129 KLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPK-----KLAEAINTGGLTPTALFS 203 (375)
Q Consensus 129 ~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~-----~~~~~~n~~g~tpl~~a~ 203 (375)
+|+..|+.+++++|+++ |.+++.+|.+|+||||+|+..++. +++++|.. .+....+..+.|+++++.
T Consensus 274 ~A~~~g~~~~v~~LL~~-Gad~~~~d~~G~TpL~~A~~~g~~-------~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 274 HATILGHTGLACLFLKR-GADLGARDSEGRDPLTIAMETANA-------DIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp HHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHHHHHHC--------------------
T ss_pred HHHHcCcHHHHHHHHHC-cCCCCCcCCCCCCHHHHHHHCCCH-------HHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 99999999999999998 999999999999999999999988 88888732 333455677888888865
Q ss_pred HH
Q 037666 204 EK 205 (375)
Q Consensus 204 ~~ 205 (375)
..
T Consensus 346 ~~ 347 (368)
T 3jue_A 346 DF 347 (368)
T ss_dssp --
T ss_pred HH
Confidence 43
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=8.4e-21 Score=148.44 Aligned_cols=108 Identities=19% Similarity=0.120 Sum_probs=100.5
Q ss_pred chhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHH
Q 037666 52 KKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKL 130 (375)
Q Consensus 52 ~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A 130 (375)
.+|.+|+||||+|+..|+.++++.|++.++++ +.+|..|.||||+|+..|+.+++++|++.++ .+.+|.+|+||||+|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 57889999999999999999999999999996 8899999999999999999999999999998 888999999999999
Q ss_pred HhcCcHHHHHHHHhcCCcccccccCCCCcHH
Q 037666 131 IETDLYAVALRLLKDRPQLATKRDRNEETAL 161 (375)
Q Consensus 131 ~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~L 161 (375)
+..++.+++++|+++ |.++|.+|..|.||-
T Consensus 83 ~~~~~~~~~~~Ll~~-ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAK-GADVNARSWGSSHHH 112 (115)
T ss_dssp HTTTCHHHHHHHHTT-SSSHHHHSCCCC---
T ss_pred HHCCCHHHHHHHHHc-CCCCCcCCccccccc
Confidence 999999999999988 999999999999873
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=3.9e-20 Score=138.98 Aligned_cols=89 Identities=25% Similarity=0.257 Sum_probs=84.3
Q ss_pred CCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcC
Q 037666 56 IGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIELLVKLIETD 134 (375)
Q Consensus 56 ~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~ 134 (375)
+|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..|+.+++++|++.++ ++.+|.+|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999999996 8899999999999999999999999999999 8889999999999999999
Q ss_pred cHHHHHHHHhc
Q 037666 135 LYAVALRLLKD 145 (375)
Q Consensus 135 ~~~~v~~LL~~ 145 (375)
+.+++++|++.
T Consensus 80 ~~~~~~~Ll~~ 90 (93)
T 1n0q_A 80 HLEVVKLLLEA 90 (93)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHc
Confidence 99999999987
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.81 E-value=8e-20 Score=165.82 Aligned_cols=160 Identities=14% Similarity=0.073 Sum_probs=132.5
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCC------hh---h-------Hh-------------chhcCCChHHHHHHHcC
Q 037666 18 ITNLGNTALHVAAQANCIDFVKELLKMMS------TE---D-------LA-------------KKNKIGCTAFFYAAGSG 68 (375)
Q Consensus 18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~------~~---~-------~~-------------~~d~~g~tpLh~Aa~~g 68 (375)
.|..+.++|+.+...|+..+.+.+....+ |. + +. ..+....++||.|+..|
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 47788999999999999766655542210 00 0 00 00112347899999999
Q ss_pred cHHHHHHHHccCCCCc-----cccCCCCChHHHHHHHc---CcHHHHHHHHHhcc-CCcccchhhHHHHHHHhcCcHHHH
Q 037666 69 MVEIVEEAMKGNKDIA-----MVPGGDGTLPIVRAAAL---GQRQTVVLLYEKTK-GSLTDDECIELLVKLIETDLYAVA 139 (375)
Q Consensus 69 ~~~iv~~Ll~~~~~~~-----~~~d~~g~tpLh~Aa~~---g~~~iv~~Ll~~~~-~~~~d~~g~t~Lh~A~~~~~~~~v 139 (375)
+.+.++.+++.+.+.. +..|..|+||||+|+.. |+.+++++|+++++ ++.+|.+|+||||+|+..|+.+++
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v 221 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECL 221 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHH
Confidence 9999999999998852 34588999999999999 89999999999999 889999999999999999999999
Q ss_pred HHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhccch
Q 037666 140 LRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVVPK 185 (375)
Q Consensus 140 ~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L~~ 185 (375)
+.|+++ |.+++.+|.+|+||||+|+..++. +++++|..
T Consensus 222 ~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~-------~~v~~Ll~ 259 (278)
T 1dcq_A 222 KLLLRG-KASIEIANESGETPLDIAKRLKHE-------HCEELLTQ 259 (278)
T ss_dssp HHHHHT-TCCTTCCCTTSCCHHHHHHHTTCH-------HHHHHHHH
T ss_pred HHHHHc-CCCCCCccCCCCCHHHHHHHcCCH-------HHHHHHHH
Confidence 999997 999999999999999999999988 88888843
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=9.6e-20 Score=178.78 Aligned_cols=135 Identities=16% Similarity=0.025 Sum_probs=112.3
Q ss_pred CChHHHHHHHcCcHHHHHHHHccCCCCcccc------CCCCChHHHHHHH---cCcHHHHHHHHHhcc-CCcccchhhHH
Q 037666 57 GCTAFFYAAGSGMVEIVEEAMKGNKDIAMVP------GGDGTLPIVRAAA---LGQRQTVVLLYEKTK-GSLTDDECIEL 126 (375)
Q Consensus 57 g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~------d~~g~tpLh~Aa~---~g~~~iv~~Ll~~~~-~~~~d~~g~t~ 126 (375)
..+.||.|+..|+.+.++.|++.++++ +.+ |..|.||||+|+. .|+.+++++|+++++ ++.+|.+|+||
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~Tp 210 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTA 210 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCH
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcH
Confidence 347899999999999999999999986 555 8899999999966 999999999999999 99999999999
Q ss_pred HHHHHhcCcHHHHHHHHhcCCcccccccCCCCcHHHHHHHhcCCCCCCCccchhhcc--chhhHhhhcCCCCChhh
Q 037666 127 LVKLIETDLYAVALRLLKDRPQLATKRDRNEETALHVLARKNLTSSNQNPCGVENVV--PKKLAEAINTGGLTPTA 200 (375)
Q Consensus 127 Lh~A~~~~~~~~v~~LL~~~~~~~~~~d~~G~T~Lh~A~~~~~~~~~~~~~~v~~~L--~~~~~~~~n~~g~tpl~ 200 (375)
||+|+.+|+.++++.|+++ |++++.+|.+|+||||+|+..++. ++.++| .+++++..+..+.+++.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~-------~~~~~Ll~~ga~~~~~~~h~~~~~~ 278 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHK-------ECEELLEQAQAGTFAFPLHVDYSWV 278 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHT-CCCCSCCCTTCCCHHHHHHHTTCH-------HHHHHHHHTCC--------------
T ss_pred HHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCH-------HHHHHHHHhCCCCCCCcceeecccc
Confidence 9999999999999999998 999999999999999999999988 888887 56666654444444433
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=4.3e-19 Score=137.75 Aligned_cols=90 Identities=24% Similarity=0.240 Sum_probs=81.0
Q ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHH
Q 037666 18 ITNLGNTALHVAAQANCIDFVKELLKMMSTEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVR 97 (375)
Q Consensus 18 ~d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~ 97 (375)
.|.+|.||||+|+..|+.+++++|+++ +.+++.+|..|+||||+|+..|+.+++++|++.++++ +.+|.+|.||||+
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMAN--GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDI 96 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHc--CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHH
Confidence 378899999999999999999999998 7889999999999999999999999999999999886 7889999999999
Q ss_pred HHHcCcHHHHHHH
Q 037666 98 AAALGQRQTVVLL 110 (375)
Q Consensus 98 Aa~~g~~~iv~~L 110 (375)
|+..|+.+++++|
T Consensus 97 A~~~~~~~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHh
Confidence 9999999998876
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=6.5e-18 Score=131.00 Aligned_cols=95 Identities=20% Similarity=0.108 Sum_probs=82.4
Q ss_pred hhhHhchhcCCChHHHHHHHcCcHHHHHHHHccCCCCccccCCCCChHHHHHHHcCcHHHHHHHHHhcc-CCcccchhhH
Q 037666 47 TEDLAKKNKIGCTAFFYAAGSGMVEIVEEAMKGNKDIAMVPGGDGTLPIVRAAALGQRQTVVLLYEKTK-GSLTDDECIE 125 (375)
Q Consensus 47 ~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~Aa~~g~~~iv~~Ll~~~~-~~~~d~~g~t 125 (375)
+......|.+|.||||+|+..|+.+++++|++.++++ +.+|.+|.||||+|+..|+.+++++|+++++ ++.+|..|+|
T Consensus 14 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 92 (110)
T 2zgd_A 14 VPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKT 92 (110)
T ss_dssp --------CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCc
Confidence 3456678899999999999999999999999999986 8889999999999999999999999999998 8889999999
Q ss_pred HHHHHHhcCcHHHHHHH
Q 037666 126 LLVKLIETDLYAVALRL 142 (375)
Q Consensus 126 ~Lh~A~~~~~~~~v~~L 142 (375)
|||+|+..|+.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999998765
No 115
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=29.52 E-value=64 Score=28.86 Aligned_cols=21 Identities=10% Similarity=0.059 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHhhhhee
Q 037666 308 ATLFVAIAAMMVVFSATSYIV 328 (375)
Q Consensus 308 ~~l~~s~~~m~~af~~~~~~v 328 (375)
.+..+|++.+..+|.+|+|-+
T Consensus 281 ~LTiit~IflP~T~IaGiyGM 301 (339)
T 4ev6_A 281 ILTMVTTIFAVPMWITGIYGM 301 (339)
T ss_dssp HHHHHHHHSSHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhccC
Confidence 356778888999999999985
No 116
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=25.16 E-value=88 Score=27.99 Aligned_cols=53 Identities=17% Similarity=0.129 Sum_probs=23.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCChhhHh-chhcCCChHHHHHHHcCcHH
Q 037666 19 TNLGNTALHVAAQANCIDFVKELLKMMSTEDLA-KKNKIGCTAFFYAAGSGMVE 71 (375)
Q Consensus 19 d~~g~tpLh~A~~~g~~~~v~~Ll~~~~~~~~~-~~d~~g~tpLh~Aa~~g~~~ 71 (375)
|..|+..+.-....|..+....+++...|.-+. ..|..|...+--+......+
T Consensus 70 d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~ 123 (351)
T 3gvo_A 70 DVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSD 123 (351)
T ss_dssp STTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHH
T ss_pred ChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHH
Confidence 555555555555555555444444432111111 23444544444444444433
No 117
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=23.58 E-value=49 Score=30.01 Aligned_cols=21 Identities=24% Similarity=0.218 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHhhhhee
Q 037666 308 ATLFVAIAAMMVVFSATSYIV 328 (375)
Q Consensus 308 ~~l~~s~~~m~~af~~~~~~v 328 (375)
.+..+|++.+..+|++|+|-+
T Consensus 305 ~LTiit~IflP~T~IaGiyGM 325 (363)
T 2iub_A 305 VLTIIATIFMPLTFIAGIYGM 325 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHHHHHHhhhcc
Confidence 456778889999999999985
No 118
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=22.91 E-value=60 Score=18.77 Aligned_cols=17 Identities=29% Similarity=0.161 Sum_probs=12.0
Q ss_pred HHHHHHcCcHHHHHHHH
Q 037666 61 FFYAAGSGMVEIVEEAM 77 (375)
Q Consensus 61 Lh~Aa~~g~~~iv~~Ll 77 (375)
+..||+.|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45677778877777664
Done!