BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037669
         (98 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P0C6E4|VM2JN_PROJR Zinc metalloproteinase/disintegrin OS=Protobothrops jerdonii PE=1
           SV=1
          Length = 483

 Score = 30.4 bits (67), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 1   MSRATKNWKTLKELEKAIQVYWSA-KDRLPPRAVKIDINIE 40
           M   T+NW++ + ++KA Q+Y +  + R P R VK+ I ++
Sbjct: 166 MCGVTQNWESDESIKKASQLYLTPEQQRFPQRYVKLAIVVD 206


>sp|P33363|BGLX_ECOLI Periplasmic beta-glucosidase OS=Escherichia coli (strain K12)
           GN=bglX PE=1 SV=2
          Length = 765

 Score = 30.4 bits (67), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 9   KTLKELEKAIQVYWSAKDRLPPRAVKIDINI---ERDLAYALKVKECPQILFLLGNRILY 65
           +T K+ +  + V   A+      + + DI I   +RDL  ALK    P +L L+  R L 
Sbjct: 497 QTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLA 556

Query: 66  REKEFRTADELVQ 78
             KE + AD +++
Sbjct: 557 LVKEDQQADAILE 569


>sp|E9NW28|VM1P3_PROMU Zinc metalloproteinase-disintegrin PMMP-3 OS=Protobothrops
           mucrosquamatus PE=2 SV=1
          Length = 411

 Score = 30.4 bits (67), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 1   MSRATKNWKTLKELEKAIQVYWSA-KDRLPPRAVKIDINIE 40
           M   T+NW++ + ++KA Q+Y +  + R P R VK+ I ++
Sbjct: 166 MCGVTQNWESDESIKKASQLYLTPEQQRFPQRYVKLAIVVD 206


>sp|Q90YA6|VM2E2_PROEL Zinc metalloproteinase/disintegrin OS=Protobothrops elegans PE=1
           SV=1
          Length = 481

 Score = 30.4 bits (67), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 1   MSRATKNWKTLKELEKAIQVYWSA-KDRLPPRAVKIDINIERDL 43
           M   T+NW++ + ++KA Q+Y +  + R P R +K+ I ++  +
Sbjct: 166 MCGVTQNWESDESIKKASQLYLTPEQQRFPQRYIKLAIVVDHGM 209


>sp|P17349|VM2E1_PROEL Zinc metalloproteinase/disintegrin OS=Protobothrops elegans PE=1
           SV=2
          Length = 481

 Score = 30.4 bits (67), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 1   MSRATKNWKTLKELEKAIQVYWSA-KDRLPPRAVKIDINIERDL 43
           M   T+NW++ + ++KA Q+Y +  + R P R +K+ I ++  +
Sbjct: 166 MCGVTQNWESDESIKKASQLYLTPEQQRFPQRYIKLAIVVDHGM 209


>sp|O57413|VM2T3_PROMU Zinc metalloproteinase/disintegrin OS=Protobothrops mucrosquamatus
           PE=1 SV=1
          Length = 481

 Score = 30.0 bits (66), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 1   MSRATKNWKTLKELEKAIQVYWSA-KDRLPPRAVKIDINIERDL 43
           M   T+NW++ + ++KA Q+Y +  + R P R +K+ I ++  +
Sbjct: 166 MCGVTQNWESDESIKKASQLYLTPEQQRFPQRYIKLAIVVDHGM 209


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.136    0.412 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,143,978
Number of Sequences: 539616
Number of extensions: 1129212
Number of successful extensions: 2555
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2555
Number of HSP's gapped (non-prelim): 10
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)