Query 037671
Match_columns 187
No_of_seqs 124 out of 1141
Neff 10.5
Searched_HMMs 13730
Date Mon Mar 25 04:46:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037671.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037671hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2astb2 c.10.1.3 (B:2136-2419) 99.8 5.4E-19 4E-23 129.1 16.6 145 34-185 49-197 (284)
2 d2astb2 c.10.1.3 (B:2136-2419) 99.8 1.2E-18 8.5E-23 127.3 13.9 145 34-185 74-222 (284)
3 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.4 3.2E-13 2.3E-17 103.1 11.4 120 57-184 3-132 (460)
4 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 2.3E-12 1.7E-16 95.7 15.2 120 53-178 183-316 (344)
5 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.4 4E-12 2.9E-16 96.9 15.4 145 35-185 259-418 (460)
6 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 7.9E-12 5.8E-16 92.8 13.9 147 34-186 124-295 (344)
7 d1pgva_ c.10.1.1 (A:) Tropomod 99.3 1.3E-11 9.4E-16 82.5 12.7 127 46-176 5-143 (167)
8 d1io0a_ c.10.1.1 (A:) Tropomod 99.3 7E-11 5.1E-15 78.8 15.2 129 46-178 7-146 (166)
9 d1pgva_ c.10.1.1 (A:) Tropomod 99.3 4E-11 2.9E-15 80.1 11.4 101 84-185 12-124 (167)
10 d1io0a_ c.10.1.1 (A:) Tropomod 99.1 5.1E-10 3.7E-14 74.5 12.3 102 84-186 14-126 (166)
11 d1a9na_ c.10.2.4 (A:) Spliceso 98.8 7E-10 5.1E-14 73.5 3.6 131 33-180 20-153 (162)
12 d1m9la_ c.10.3.1 (A:) Outer ar 98.7 1E-09 7.4E-14 75.1 0.2 109 52-177 44-153 (198)
13 d1fs1a1 a.158.1.1 (A:109-149) 98.7 3E-09 2.2E-13 53.4 1.8 30 1-31 11-41 (41)
14 d1dcea3 c.10.2.2 (A:444-567) R 98.7 3.5E-09 2.5E-13 66.9 2.2 62 111-177 41-103 (124)
15 d1a9na_ c.10.2.4 (A:) Spliceso 98.6 5.5E-09 4E-13 69.1 2.3 109 55-178 17-126 (162)
16 d2omxa2 c.10.2.1 (A:37-235) In 98.5 1.7E-07 1.2E-11 63.7 7.6 126 34-178 43-186 (199)
17 d1m9la_ c.10.3.1 (A:) Outer ar 98.4 1.4E-08 1E-12 69.3 0.1 125 34-178 51-186 (198)
18 d1dcea3 c.10.2.2 (A:444-567) R 98.4 1E-07 7.3E-12 60.0 4.1 119 35-170 2-123 (124)
19 d1h6ta2 c.10.2.1 (A:31-240) In 98.3 1.1E-06 8.1E-11 60.0 8.0 125 34-178 49-192 (210)
20 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.2 7.8E-08 5.7E-12 65.1 0.2 110 56-177 29-139 (192)
21 d2omxa2 c.10.2.1 (A:37-235) In 98.1 5.2E-06 3.8E-10 56.1 8.1 103 55-177 39-141 (199)
22 d1h6ta2 c.10.2.1 (A:31-240) In 98.1 3.3E-06 2.4E-10 57.6 6.8 78 56-149 46-123 (210)
23 d1h6ua2 c.10.2.1 (A:36-262) In 98.0 5.3E-06 3.9E-10 57.1 6.8 126 34-178 66-209 (227)
24 d1p22a1 a.158.1.1 (A:135-252) 98.0 8.3E-07 6E-11 55.1 1.7 32 1-33 25-57 (118)
25 d2omza2 c.10.2.1 (A:33-416) In 98.0 9.1E-06 6.6E-10 59.8 7.4 124 34-178 222-365 (384)
26 d1nexb1 a.158.1.1 (B:270-369) 97.9 9.1E-07 6.6E-11 53.3 0.9 33 1-34 16-50 (100)
27 d1ozna_ c.10.2.7 (A:) Reticulo 97.9 1.4E-06 1E-10 62.2 1.7 87 86-177 152-238 (284)
28 d2omza2 c.10.2.1 (A:33-416) In 97.9 1.3E-05 9.1E-10 59.0 6.8 126 34-174 244-383 (384)
29 d2ovrb1 a.158.1.1 (B:2263-2364 97.8 1.5E-06 1.1E-10 52.4 0.6 32 1-33 29-61 (102)
30 d1koha1 c.10.2.3 (A:201-362) m 97.8 3.4E-06 2.5E-10 55.2 2.3 83 84-170 62-152 (162)
31 d1xkua_ c.10.2.7 (A:) Decorin 97.8 2.3E-06 1.7E-10 61.5 1.6 89 85-178 193-286 (305)
32 d1h6ua2 c.10.2.1 (A:36-262) In 97.8 2.8E-05 2.1E-09 53.3 7.1 79 84-173 148-226 (227)
33 d1koha1 c.10.2.3 (A:201-362) m 97.8 1.5E-05 1.1E-09 52.0 5.3 89 48-144 57-152 (162)
34 d1w8aa_ c.10.2.7 (A:) Slit {Fr 97.8 6.8E-07 5E-11 60.2 -1.5 88 86-177 28-115 (192)
35 d1p9ag_ c.10.2.7 (G:) von Will 97.7 5.3E-06 3.9E-10 58.5 2.0 17 161-177 145-161 (266)
36 d1xkua_ c.10.2.7 (A:) Decorin 97.7 4.3E-06 3.1E-10 60.1 1.0 110 53-178 147-256 (305)
37 d1p9ag_ c.10.2.7 (G:) von Will 97.6 4.6E-06 3.4E-10 58.9 0.8 14 163-176 194-207 (266)
38 d1ozna_ c.10.2.7 (A:) Reticulo 97.6 4.6E-06 3.3E-10 59.4 0.4 113 53-177 102-214 (284)
39 d1ogqa_ c.10.2.8 (A:) Polygala 97.2 1.3E-06 9.7E-11 63.1 -6.5 35 112-147 100-134 (313)
40 d2ifga3 c.10.2.7 (A:36-191) Hi 97.2 2E-05 1.5E-09 51.1 -0.5 39 86-126 55-93 (156)
41 d1ogqa_ c.10.2.8 (A:) Polygala 97.0 1.9E-05 1.4E-09 56.8 -2.6 133 34-177 53-187 (313)
42 d1xwdc1 c.10.2.7 (C:18-259) Fo 96.8 3E-05 2.2E-09 53.5 -2.5 111 56-176 29-140 (242)
43 d1jl5a_ c.10.2.6 (A:) Leucine 96.7 0.00051 3.7E-08 49.3 3.6 96 56-177 38-133 (353)
44 d2ifga3 c.10.2.7 (A:36-191) Hi 96.6 0.00046 3.3E-08 44.4 2.3 88 85-177 29-116 (156)
45 d1xwdc1 c.10.2.7 (C:18-259) Fo 96.5 8.2E-05 6E-09 51.2 -2.1 85 34-126 32-116 (242)
46 d1jl5a_ c.10.2.6 (A:) Leucine 96.2 0.0011 8.1E-08 47.5 2.8 55 112-177 283-337 (353)
47 d1dqaa1 d.58.20.1 (A:587-703) 22.6 26 0.0019 20.2 2.2 25 129-154 81-105 (117)
No 1
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=5.4e-19 Score=129.08 Aligned_cols=145 Identities=19% Similarity=0.328 Sum_probs=103.8
Q ss_pred ceeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCC
Q 037671 34 KNLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRAS 113 (187)
Q Consensus 34 ~~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 113 (187)
++++++++.+++..+..+...+++|++|++++ +.+++.++..++ .+++|++|++++|..+++.++..+.+.++
T Consensus 49 ~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~----~~l~~~~~~~l~---~~~~L~~L~Ls~c~~itd~~l~~l~~~~~ 121 (284)
T d2astb2 49 QHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG----LRLSDPIVNTLA---KNSNLVRLNLSGCSGFSEFALQTLLSSCS 121 (284)
T ss_dssp CEEECTTCEECHHHHHHHHTTBCCCSEEECTT----CBCCHHHHHHHT---TCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred CEEECCCCccCHHHHHHHHHhCCCcccccccc----cCCCcHHHHHHh---cCCCCcCccccccccccccccchhhHHHH
Confidence 45677777778777888888888888888874 367777776652 36778888887777777777777777777
Q ss_pred CCCEEEecC-CCCCHHHHHH-HHhcCCccceeeccCC-CCCcHHHHHHHHhcCCCCcEEEeeCC-CCCHHHHHhhh
Q 037671 114 SLQHLNIGG-TFITDESLYA-IANSCPQLKSIVLWSC-RQVTGNGLLFLVNKCGRLESINVWGT-RLPLDCFIGLL 185 (187)
Q Consensus 114 ~L~~L~l~~-~~~~~~~~~~-l~~~~~~L~~L~l~~~-~~~~~~~~~~l~~~~~~L~~L~l~~~-~i~~~~~~~L~ 185 (187)
+|++|++++ ..++++++.. +...++.|++|++++| ..+++.++..++..||+|++|++++| .++++++..+.
T Consensus 122 ~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~ 197 (284)
T d2astb2 122 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF 197 (284)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG
T ss_pred hccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhc
Confidence 788887777 4677766643 4455567777777765 35777777777777777777777776 56777666554
No 2
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.2e-18 Score=127.28 Aligned_cols=145 Identities=18% Similarity=0.271 Sum_probs=115.4
Q ss_pred ceeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHh-cC
Q 037671 34 KNLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLIS-RA 112 (187)
Q Consensus 34 ~~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~-~~ 112 (187)
+++.+.++.+++.....+. .+++|++|+++++. .+++.++..+ ...|++|++|++++|..+++.++..... .+
T Consensus 74 ~~L~L~~~~l~~~~~~~l~-~~~~L~~L~Ls~c~---~itd~~l~~l--~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~ 147 (284)
T d2astb2 74 QNLSLEGLRLSDPIVNTLA-KNSNLVRLNLSGCS---GFSEFALQTL--LSSCSRLDELNLSWCFDFTEKHVQVAVAHVS 147 (284)
T ss_dssp SEEECTTCBCCHHHHHHHT-TCTTCSEEECTTCB---SCCHHHHHHH--HHHCTTCCEEECCCCTTCCHHHHHHHHHHSC
T ss_pred ccccccccCCCcHHHHHHh-cCCCCcCccccccc---cccccccchh--hHHHHhccccccccccccccccchhhhcccc
Confidence 5678888888877776654 57889999998643 6888888776 3558899999999888788888765444 46
Q ss_pred CCCCEEEecC--CCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCC-CCCHHHHHhhh
Q 037671 113 SSLQHLNIGG--TFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGT-RLPLDCFIGLL 185 (187)
Q Consensus 113 ~~L~~L~l~~--~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~-~i~~~~~~~L~ 185 (187)
++|+.|++++ ..+++.++..++.+||+|++|++++|..+++.++..++ .+|+|++|++++| .++++++..|.
T Consensus 148 ~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~-~~~~L~~L~L~~C~~i~~~~l~~L~ 222 (284)
T d2astb2 148 ETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF-QLNYLQHLSLSRCYDIIPETLLELG 222 (284)
T ss_dssp TTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG-GCTTCCEEECTTCTTCCGGGGGGGG
T ss_pred cccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhc-ccCcCCEEECCCCCCCChHHHHHHh
Confidence 7899999987 36888888888888999999999888888888877776 4888999999887 78888877664
No 3
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=3.2e-13 Score=103.14 Aligned_cols=120 Identities=15% Similarity=0.206 Sum_probs=65.4
Q ss_pred CCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHH---hcCCCCCEEEecCCCCCHHHHHHH
Q 037671 57 SLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLI---SRASSLQHLNIGGTFITDESLYAI 133 (187)
Q Consensus 57 ~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~---~~~~~L~~L~l~~~~~~~~~~~~l 133 (187)
+|+.||++.+ .+++.++..+. ..+++++.|++++|. +++.++..+. +.+++|+.|+++++.+++.++..+
T Consensus 3 ~l~~ld~~~~----~i~~~~~~~l~--~~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l 75 (460)
T d1z7xw1 3 DIQSLDIQCE----ELSDARWAELL--PLLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSNELGDVGVHCV 75 (460)
T ss_dssp EEEEEEEESC----CCCHHHHHHHH--HHHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHH
T ss_pred CCCEEEeeCC----cCChHHHHHHH--HhCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHH
Confidence 4556666543 55555554442 234556666666554 5555554333 345666666666666666655555
Q ss_pred HhcC----CccceeeccCCCCCcHHHHHHHHh---cCCCCcEEEeeCCCCCHHHHHhh
Q 037671 134 ANSC----PQLKSIVLWSCRQVTGNGLLFLVN---KCGRLESINVWGTRLPLDCFIGL 184 (187)
Q Consensus 134 ~~~~----~~L~~L~l~~~~~~~~~~~~~l~~---~~~~L~~L~l~~~~i~~~~~~~L 184 (187)
+..+ +.|++|++++| .+++.++..+++ .+++|++|++++|.+++.++..+
T Consensus 76 ~~~l~~~~~~L~~L~L~~n-~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l 132 (460)
T d1z7xw1 76 LQGLQTPSCKIQKLSLQNC-CLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLL 132 (460)
T ss_dssp HHTTCSTTCCCCEEECTTS-CCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHH
T ss_pred HHHHhcCCCCCCEEECCCC-Cccccccccccchhhccccccccccccccchhhhhhhh
Confidence 5433 24666666654 456555554443 34556666666666665554433
No 4
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.44 E-value=2.3e-12 Score=95.67 Aligned_cols=120 Identities=16% Similarity=0.179 Sum_probs=61.6
Q ss_pred hcCCCCcEEEeeeccCCcccchhhhhhh-hh-hccCCCccEEEecCCCCCCHHHHHHHH---hcCCCCCEEEecCCCCCH
Q 037671 53 GYAYSLKELEISRSRWGCQITDNGLYRM-SF-AKCISNLTSISLWGLTGITDKGVVQLI---SRASSLQHLNIGGTFITD 127 (187)
Q Consensus 53 ~~~~~L~~L~l~~~~~~~~~~~~~l~~l-~~-~~~~~~L~~L~l~~~~~~~~~~~~~~~---~~~~~L~~L~l~~~~~~~ 127 (187)
+.++.++.|++++| .+++.+...+ .. ...+++|+.|+++++. +++.+...+. +.+++|+.|++++|.+++
T Consensus 183 ~~~~~L~~L~L~~n----~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~-i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~ 257 (344)
T d2ca6a1 183 QSHRLLHTVKMVQN----GIRPEGIEHLLLEGLAYCQELKVLDLQDNT-FTHLGSSALAIALKSWPNLRELGLNDCLLSA 257 (344)
T ss_dssp HHCTTCCEEECCSS----CCCHHHHHHHHHTTGGGCTTCCEEECCSSC-CHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred hhhhhhcccccccc----cccccccccchhhhhcchhhhccccccccc-ccccccccccccccccccchhhhhhcCccCc
Confidence 33455666666543 4454443221 11 1335556666665553 5555443332 345566666666666666
Q ss_pred HHHHHHHhc-----CCccceeeccCCCCCcHHHHHHHHh----cCCCCcEEEeeCCCCCH
Q 037671 128 ESLYAIANS-----CPQLKSIVLWSCRQVTGNGLLFLVN----KCGRLESINVWGTRLPL 178 (187)
Q Consensus 128 ~~~~~l~~~-----~~~L~~L~l~~~~~~~~~~~~~l~~----~~~~L~~L~l~~~~i~~ 178 (187)
+++..++.. .+.|++|+++++ .++++++..+++ .+++|+.|++++|.+++
T Consensus 258 ~g~~~l~~~l~~~~~~~L~~L~ls~N-~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 258 RGAAAVVDAFSKLENIGLQTLRLQYN-EIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHHHHHHHHHHTCSSCCCCEEECCSS-CCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred hhhHHHHHHhhhccCCCCCEEECCCC-cCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 655555432 234666666553 566655554443 34556666666665543
No 5
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.41 E-value=4e-12 Score=96.95 Aligned_cols=145 Identities=17% Similarity=0.197 Sum_probs=92.3
Q ss_pred eeeecccccCHHHHH---HHHhcCCCCcEEEeeeccCCcccchhhhhhhhhh--ccCCCccEEEecCCCCCCHHHHHHH-
Q 037671 35 NLSFAGWKMDDDSTA---RLVGYAYSLKELEISRSRWGCQITDNGLYRMSFA--KCISNLTSISLWGLTGITDKGVVQL- 108 (187)
Q Consensus 35 ~l~~~~~~l~~~~~~---~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~--~~~~~L~~L~l~~~~~~~~~~~~~~- 108 (187)
.+++.++.+...... ......+.++.++++++ .+++.++..++.. ...+.|+.+.++.+. ++..++..+
T Consensus 259 ~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n----~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~-l~~~~~~~l~ 333 (460)
T d1z7xw1 259 TLWIWECGITAKGCGDLCRVLRAKESLKELSLAGN----ELGDEGARLLCETLLEPGCQLESLWVKSCS-FTAACCSHFS 333 (460)
T ss_dssp EEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTC----CCHHHHHHHHHHHHTSTTCCCCEEECTTSC-CBGGGHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccc----cccccccchhhccccccccccccccccccc-hhhhhhhhcc
Confidence 445555555544332 22334566777777654 5666666655422 234567788887765 666655444
Q ss_pred --HhcCCCCCEEEecCCCCCHHHHHHHHh----cCCccceeeccCCCCCcHHHHHHHHh---cCCCCcEEEeeCCCCCHH
Q 037671 109 --ISRASSLQHLNIGGTFITDESLYAIAN----SCPQLKSIVLWSCRQVTGNGLLFLVN---KCGRLESINVWGTRLPLD 179 (187)
Q Consensus 109 --~~~~~~L~~L~l~~~~~~~~~~~~l~~----~~~~L~~L~l~~~~~~~~~~~~~l~~---~~~~L~~L~l~~~~i~~~ 179 (187)
...+++|+.|+++++.++++++..++. ..+.|++|++++| .++++++..+++ .+++|++|++++|.++++
T Consensus 334 ~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~ 412 (460)
T d1z7xw1 334 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC-DVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 412 (460)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS-CCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred cccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCC-CCChHHHHHHHHHHhcCCCCCEEECCCCcCCHH
Confidence 345677888888887787777666653 3455888888876 677777666643 367788888888888887
Q ss_pred HHHhhh
Q 037671 180 CFIGLL 185 (187)
Q Consensus 180 ~~~~L~ 185 (187)
|+..|+
T Consensus 413 g~~~l~ 418 (460)
T d1z7xw1 413 GILQLV 418 (460)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
No 6
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.37 E-value=7.9e-12 Score=92.75 Aligned_cols=147 Identities=18% Similarity=0.261 Sum_probs=114.7
Q ss_pred ceeeecccccCHHHHHHH------------HhcCCCCcEEEeeeccCCcccchhhhhhhhhh-ccCCCccEEEecCCCCC
Q 037671 34 KNLSFAGWKMDDDSTARL------------VGYAYSLKELEISRSRWGCQITDNGLYRMSFA-KCISNLTSISLWGLTGI 100 (187)
Q Consensus 34 ~~l~~~~~~l~~~~~~~~------------~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~-~~~~~L~~L~l~~~~~~ 100 (187)
+++.+.++.+++.+...+ ....+.++.++++++ .+++.++..++.. ..++.|+.|+++.+. +
T Consensus 124 ~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n----~i~~~~~~~l~~~l~~~~~L~~L~L~~n~-i 198 (344)
T d2ca6a1 124 EHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN----RLENGSMKEWAKTFQSHRLLHTVKMVQNG-I 198 (344)
T ss_dssp CEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS----CCTGGGHHHHHHHHHHCTTCCEEECCSSC-C
T ss_pred hheecccccccccccccccccccccccccccccCcccceeecccc----cccccccccccchhhhhhhhccccccccc-c
Confidence 567777777765543333 234678999999865 7788887776432 457899999999886 8
Q ss_pred CHHHHHHH----HhcCCCCCEEEecCCCCCHHHHHHHH---hcCCccceeeccCCCCCcHHHHHHHHhc-----CCCCcE
Q 037671 101 TDKGVVQL----ISRASSLQHLNIGGTFITDESLYAIA---NSCPQLKSIVLWSCRQVTGNGLLFLVNK-----CGRLES 168 (187)
Q Consensus 101 ~~~~~~~~----~~~~~~L~~L~l~~~~~~~~~~~~l~---~~~~~L~~L~l~~~~~~~~~~~~~l~~~-----~~~L~~ 168 (187)
++.++..+ ...+++|+.|+++++.+++.+...++ ..+++|++|++++| .+++.++..+++. .+.|++
T Consensus 199 ~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n-~i~~~g~~~l~~~l~~~~~~~L~~ 277 (344)
T d2ca6a1 199 RPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDC-LLSARGAAAVVDAFSKLENIGLQT 277 (344)
T ss_dssp CHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTC-CCCHHHHHHHHHHHHTCSSCCCCE
T ss_pred cccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcC-ccCchhhHHHHHHhhhccCCCCCE
Confidence 88876543 34689999999999999998877665 56788999999996 8999998888754 257999
Q ss_pred EEeeCCCCCHHHHHhhhc
Q 037671 169 INVWGTRLPLDCFIGLLT 186 (187)
Q Consensus 169 L~l~~~~i~~~~~~~L~~ 186 (187)
|++++|.++++++..|..
T Consensus 278 L~ls~N~i~~~~~~~l~~ 295 (344)
T d2ca6a1 278 LRLQYNEIELDAVRTLKT 295 (344)
T ss_dssp EECCSSCCBHHHHHHHHH
T ss_pred EECCCCcCChHHHHHHHH
Confidence 999999999999877653
No 7
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.35 E-value=1.3e-11 Score=82.54 Aligned_cols=127 Identities=18% Similarity=0.179 Sum_probs=99.3
Q ss_pred HHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhh-ccCCCccEEEecCCCCCCHHHHHHHH---hcCCCCCEEEec
Q 037671 46 DSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFA-KCISNLTSISLWGLTGITDKGVVQLI---SRASSLQHLNIG 121 (187)
Q Consensus 46 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~---~~~~~L~~L~l~ 121 (187)
..+..+....+.|+.|+|+++. .++++++..++.+ ...++|++|++++|. +++.++..++ +..+.|+.|+++
T Consensus 5 ~~l~~l~~n~~~L~~L~L~~~~---~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~-l~~~~~~~la~~L~~n~~L~~L~L~ 80 (167)
T d1pgva_ 5 SCINRLREDDTDLKEVNINNMK---RVSKERIRSLIEAACNSKHIEKFSLANTA-ISDSEARGLIELIETSPSLRVLNVE 80 (167)
T ss_dssp HHHHHHHTTCSSCCEEECTTCC---SSCHHHHHHHHHHHTTCSCCCEEECTTSC-CBHHHHTTHHHHHHHCSSCCEEECC
T ss_pred HHHHHHHhCCCCCcEEEeCCCC---CCCHHHHHHHHHHHhhCCccceeeccccc-cchhHHHHHhhhhhhcccccceeee
Confidence 3467788888999999998532 6888888877533 456889999999886 9888775544 468999999999
Q ss_pred CCCCCHHHHHHHHhcC---CccceeeccCC--CCCcHHHHHHHHh---cCCCCcEEEeeCCCC
Q 037671 122 GTFITDESLYAIANSC---PQLKSIVLWSC--RQVTGNGLLFLVN---KCGRLESINVWGTRL 176 (187)
Q Consensus 122 ~~~~~~~~~~~l~~~~---~~L~~L~l~~~--~~~~~~~~~~l~~---~~~~L~~L~l~~~~i 176 (187)
++.++++++..++..+ +.|++|+++++ ..+++++...+++ ..++|+.|+++.+..
T Consensus 81 ~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 81 SNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp SSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred hhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 9999999998887655 55999999864 2467777665554 478999999987744
No 8
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.32 E-value=7e-11 Score=78.79 Aligned_cols=129 Identities=18% Similarity=0.177 Sum_probs=102.3
Q ss_pred HHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhh-ccCCCccEEEecCCCCCCHHHHHHHHh---cCCCCCEEEec
Q 037671 46 DSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFA-KCISNLTSISLWGLTGITDKGVVQLIS---RASSLQHLNIG 121 (187)
Q Consensus 46 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~~---~~~~L~~L~l~ 121 (187)
..+..+....+.|++|+++++ ..+++.++..++.+ ..+++|++|+++++. +++.++..++. ..+.++.++++
T Consensus 7 ~~l~~~~~~~~~L~~L~L~~~---~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~-l~~~~~~~L~~~l~~~~~l~~l~l~ 82 (166)
T d1io0a_ 7 ETLKRIQNNDPDLEEVNLNNI---MNIPVPTLKACAEALKTNTYVKKFSIVGTR-SNDPVAFALAEMLKVNNTLKSLNVE 82 (166)
T ss_dssp HHHHHHHTTCTTCCEEECTTC---TTCCHHHHHHHHHHHTTCCSCCEEECTTSC-CCHHHHHHHHHHHHHCSSCCEEECC
T ss_pred HHHHHHHhcCCCCcEEEcCCC---CCCCHHHHHHHHHHHhcCCccCeeeccCCc-ccHHHHHHHHHHHhhcccchhhhhc
Confidence 346777778899999999853 27899999888644 457899999999985 99988876554 57899999999
Q ss_pred CCCCCHHHHHHHHhc---CCccceeeccCC-CCCcHHHHHHHHh---cCCCCcEEEeeCCCCCH
Q 037671 122 GTFITDESLYAIANS---CPQLKSIVLWSC-RQVTGNGLLFLVN---KCGRLESINVWGTRLPL 178 (187)
Q Consensus 122 ~~~~~~~~~~~l~~~---~~~L~~L~l~~~-~~~~~~~~~~l~~---~~~~L~~L~l~~~~i~~ 178 (187)
++.++++++..++.. .+.|+.+++..+ +.+++++...++. .+++|++|+++.+...+
T Consensus 83 ~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~~~ 146 (166)
T d1io0a_ 83 SNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 146 (166)
T ss_dssp SSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred cccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCCcH
Confidence 999999998888744 566888777543 4788988777764 68999999998875543
No 9
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.26 E-value=4e-11 Score=80.11 Aligned_cols=101 Identities=13% Similarity=0.206 Sum_probs=83.5
Q ss_pred ccCCCccEEEecCCCCCCHHHHHHHHh---cCCCCCEEEecCCCCCHHHHHHHHh---cCCccceeeccCCCCCcHHHHH
Q 037671 84 KCISNLTSISLWGLTGITDKGVVQLIS---RASSLQHLNIGGTFITDESLYAIAN---SCPQLKSIVLWSCRQVTGNGLL 157 (187)
Q Consensus 84 ~~~~~L~~L~l~~~~~~~~~~~~~~~~---~~~~L~~L~l~~~~~~~~~~~~l~~---~~~~L~~L~l~~~~~~~~~~~~ 157 (187)
...++|++|+++++..+++.++..++. ..++|++|+++++.++++++..++. ..+.|++|++++| .+++.|+.
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n-~i~~~g~~ 90 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESN-FLTPELLA 90 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSS-BCCHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehh-hcchHHHH
Confidence 457999999999876699998877665 5688999999999999998776654 4678999999996 89999999
Q ss_pred HHHhcC---CCCcEEEeeCC---CCCHHHHHhhh
Q 037671 158 FLVNKC---GRLESINVWGT---RLPLDCFIGLL 185 (187)
Q Consensus 158 ~l~~~~---~~L~~L~l~~~---~i~~~~~~~L~ 185 (187)
.+++.+ ++|++|+++++ .+++++...|+
T Consensus 91 ~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~ 124 (167)
T d1pgva_ 91 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMM 124 (167)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHH
T ss_pred HHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHH
Confidence 887665 67999999877 46677776665
No 10
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.15 E-value=5.1e-10 Score=74.49 Aligned_cols=102 Identities=20% Similarity=0.227 Sum_probs=84.6
Q ss_pred ccCCCccEEEecCCCCCCHHHHHHHHh---cCCCCCEEEecCCCCCHHHHHHHHh---cCCccceeeccCCCCCcHHHHH
Q 037671 84 KCISNLTSISLWGLTGITDKGVVQLIS---RASSLQHLNIGGTFITDESLYAIAN---SCPQLKSIVLWSCRQVTGNGLL 157 (187)
Q Consensus 84 ~~~~~L~~L~l~~~~~~~~~~~~~~~~---~~~~L~~L~l~~~~~~~~~~~~l~~---~~~~L~~L~l~~~~~~~~~~~~ 157 (187)
...|+|++|++++...+++.++..+++ .++.|+.|+++++.++++++..++. ..+.++.+++.+| .++++++.
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~-~~~~~g~~ 92 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESN-FISGSGIL 92 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSS-CCCHHHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccc-cccchhHH
Confidence 457999999999876799999887776 5789999999999999998877654 4577999999885 89999988
Q ss_pred HHHhc---CCCCcEEEe--eCCCCCHHHHHhhhc
Q 037671 158 FLVNK---CGRLESINV--WGTRLPLDCFIGLLT 186 (187)
Q Consensus 158 ~l~~~---~~~L~~L~l--~~~~i~~~~~~~L~~ 186 (187)
.+++. .++|+++++ ++|.++++|...|+.
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~ 126 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIAN 126 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHH
T ss_pred HHHHHHHhCccccEEeeccCCCcCcHHHHHHHHH
Confidence 88754 578988666 567899999888763
No 11
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=7e-10 Score=73.52 Aligned_cols=131 Identities=15% Similarity=0.203 Sum_probs=88.9
Q ss_pred cceeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcC
Q 037671 33 RKNLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRA 112 (187)
Q Consensus 33 ~~~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 112 (187)
-+++++.+++++.- +.+...+++|+.|++++| .+++- ..+ ..+++|+.|+++++. ++.-.- .+...+
T Consensus 20 lr~L~L~~n~I~~i--~~~~~~l~~L~~L~Ls~N----~i~~l--~~~---~~l~~L~~L~ls~N~-i~~l~~-~~~~~l 86 (162)
T d1a9na_ 20 DRELDLRGYKIPVI--ENLGATLDQFDAIDFSDN----EIRKL--DGF---PLLRRLKTLLVNNNR-ICRIGE-GLDQAL 86 (162)
T ss_dssp CEEEECTTSCCCSC--CCGGGGTTCCSEEECCSS----CCCEE--CCC---CCCSSCCEEECCSSC-CCEECS-CHHHHC
T ss_pred CcEEECCCCCCCcc--CccccccccCCEEECCCC----CCCcc--CCc---ccCcchhhhhccccc-ccCCCc-cccccc
Confidence 36788888877643 345567889999999987 44432 112 347899999999886 554221 233458
Q ss_pred CCCCEEEecCCCCCHH-HHHHHHhcCCccceeeccCCCCCcHH-HH-HHHHhcCCCCcEEEeeCCCCCHHH
Q 037671 113 SSLQHLNIGGTFITDE-SLYAIANSCPQLKSIVLWSCRQVTGN-GL-LFLVNKCGRLESINVWGTRLPLDC 180 (187)
Q Consensus 113 ~~L~~L~l~~~~~~~~-~~~~l~~~~~~L~~L~l~~~~~~~~~-~~-~~l~~~~~~L~~L~l~~~~i~~~~ 180 (187)
++|+.|++++|.+++- .+..+ ..+|+|++|++.+| .+++. +. ..+...+|+|+.|| +..|+++.
T Consensus 87 ~~L~~L~L~~N~i~~~~~l~~l-~~l~~L~~L~l~~N-~i~~~~~~r~~~i~~lp~L~~LD--~~~i~~~e 153 (162)
T d1a9na_ 87 PDLTELILTNNSLVELGDLDPL-ASLKSLTYLCILRN-PVTNKKHYRLYVIYKVPQVRVLD--FQKVKLKE 153 (162)
T ss_dssp TTCCEEECCSCCCCCGGGGGGG-GGCTTCCEEECCSS-GGGGSTTHHHHHHHHCTTCSEET--TEECCHHH
T ss_pred cccccceecccccccccccccc-ccccccchhhcCCC-ccccccchHHHHHHHCCCcCeeC--CCCCCHHH
Confidence 9999999999887753 23333 45899999999986 44432 22 33456799999988 44676654
No 12
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.68 E-value=1e-09 Score=75.10 Aligned_cols=109 Identities=23% Similarity=0.213 Sum_probs=59.7
Q ss_pred HhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHH
Q 037671 52 VGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLY 131 (187)
Q Consensus 52 ~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 131 (187)
+..+++|++|++++| .+++- ..+ ..+++|+.|+++++. ++.- ..+....++|+.|++++|.+++ +.
T Consensus 44 l~~L~~L~~L~Ls~n----~I~~i--~~l---~~l~~L~~L~Ls~N~-i~~i--~~~~~~~~~L~~L~l~~N~i~~--l~ 109 (198)
T d1m9la_ 44 LSTLKACKHLALSTN----NIEKI--SSL---SGMENLRILSLGRNL-IKKI--ENLDAVADTLEELWISYNQIAS--LS 109 (198)
T ss_dssp HHHTTTCCEEECSEE----EESCC--CCH---HHHTTCCEEECCEEE-ECSC--SSHHHHHHHCCEEECSEEECCC--HH
T ss_pred HhcccccceeECccc----CCCCc--ccc---cCCccccChhhcccc-cccc--cccccccccccccccccccccc--cc
Confidence 345678888888866 44431 112 225778888887664 3321 1122223467777777766654 22
Q ss_pred HHHhcCCccceeeccCCCCCcHHH-HHHHHhcCCCCcEEEeeCCCCC
Q 037671 132 AIANSCPQLKSIVLWSCRQVTGNG-LLFLVNKCGRLESINVWGTRLP 177 (187)
Q Consensus 132 ~l~~~~~~L~~L~l~~~~~~~~~~-~~~l~~~~~~L~~L~l~~~~i~ 177 (187)
.+ ..+++|++|+++++ .+++-. +..+ ..+|+|+.|++++|+++
T Consensus 110 ~~-~~l~~L~~L~L~~N-~i~~~~~~~~l-~~l~~L~~L~L~~N~l~ 153 (198)
T d1m9la_ 110 GI-EKLVNLRVLYMSNN-KITNWGEIDKL-AALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HH-HHHHHSSEEEESEE-ECCCHHHHHHH-TTTTTCSEEEECSSHHH
T ss_pred cc-cccccccccccccc-hhccccccccc-cCCCccceeecCCCccc
Confidence 22 23566777777663 454432 2333 35677777777776553
No 13
>d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.68 E-value=3e-09 Score=53.44 Aligned_cols=30 Identities=37% Similarity=0.493 Sum_probs=25.3
Q ss_pred CccccccchhHHHHHHHhhHHHHHHh-hhhhc
Q 037671 1 FLFVFVIPFVCLLRVSSVCKKWKLGV-KQSLA 31 (187)
Q Consensus 1 ~I~~~l~~~~~~~~~~~vck~w~~~~-~~~l~ 31 (187)
+||+||+. +|++++++|||+|++++ .+.+|
T Consensus 11 ~If~~L~~-~dl~~~~~Vcr~w~~l~~~~~lW 41 (41)
T d1fs1a1 11 GIFSCLCL-PELLKVSGVCKRWYRLASDESLW 41 (41)
T ss_dssp HHHTTSCG-GGHHHHHTTCHHHHHHHTCGGGC
T ss_pred HHHHcCCH-HHHHHHHHHHHHHHHHhCCcccC
Confidence 48999995 99999999999999977 44443
No 14
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.67 E-value=3.5e-09 Score=66.94 Aligned_cols=62 Identities=19% Similarity=0.307 Sum_probs=26.9
Q ss_pred cCCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHH-HHHHHHhcCCCCcEEEeeCCCCC
Q 037671 111 RASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGN-GLLFLVNKCGRLESINVWGTRLP 177 (187)
Q Consensus 111 ~~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~-~~~~l~~~~~~L~~L~l~~~~i~ 177 (187)
.+++|+.|++++|.+++- .. ...+|+|++|+++++ .+++. .+..+ ..+|+|+.|++++|+++
T Consensus 41 ~l~~L~~L~l~~N~i~~l--~~-~~~l~~L~~L~l~~N-~i~~~~~~~~l-~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 41 ALRCLEVLQASDNALENV--DG-VANLPRLQELLLCNN-RLQQSAAIQPL-VSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp GCTTCCEEECCSSCCCCC--GG-GTTCSSCCEEECCSS-CCCSSSTTGGG-GGCTTCCEEECTTSGGG
T ss_pred hhhccccccccccccccc--Cc-cccccccCeEECCCC-ccCCCCCchhh-cCCCCCCEEECCCCcCC
Confidence 345555555555444421 11 123455555555542 33322 12222 23555555555555443
No 15
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.62 E-value=5.5e-09 Score=69.10 Aligned_cols=109 Identities=14% Similarity=0.115 Sum_probs=76.2
Q ss_pred CCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHH
Q 037671 55 AYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYAIA 134 (187)
Q Consensus 55 ~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~ 134 (187)
...++.|++++| .++.-. .+ ...+++|+.|+++++. ++.- . -...+++|++|++++|.++.-.. .+.
T Consensus 17 ~~~lr~L~L~~n----~I~~i~--~~--~~~l~~L~~L~Ls~N~-i~~l--~-~~~~l~~L~~L~ls~N~i~~l~~-~~~ 83 (162)
T d1a9na_ 17 AVRDRELDLRGY----KIPVIE--NL--GATLDQFDAIDFSDNE-IRKL--D-GFPLLRRLKTLLVNNNRICRIGE-GLD 83 (162)
T ss_dssp TTSCEEEECTTS----CCCSCC--CG--GGGTTCCSEEECCSSC-CCEE--C-CCCCCSSCCEEECCSSCCCEECS-CHH
T ss_pred cCcCcEEECCCC----CCCccC--cc--ccccccCCEEECCCCC-CCcc--C-CcccCcchhhhhcccccccCCCc-ccc
Confidence 456899999976 444321 11 1336899999999886 6542 1 13468999999999987764211 233
Q ss_pred hcCCccceeeccCCCCCcHH-HHHHHHhcCCCCcEEEeeCCCCCH
Q 037671 135 NSCPQLKSIVLWSCRQVTGN-GLLFLVNKCGRLESINVWGTRLPL 178 (187)
Q Consensus 135 ~~~~~L~~L~l~~~~~~~~~-~~~~l~~~~~~L~~L~l~~~~i~~ 178 (187)
..+|.|++|+++++ .+++- .+..+ ..+|+|++|++++|++++
T Consensus 84 ~~l~~L~~L~L~~N-~i~~~~~l~~l-~~l~~L~~L~l~~N~i~~ 126 (162)
T d1a9na_ 84 QALPDLTELILTNN-SLVELGDLDPL-ASLKSLTYLCILRNPVTN 126 (162)
T ss_dssp HHCTTCCEEECCSC-CCCCGGGGGGG-GGCTTCCEEECCSSGGGG
T ss_pred ccccccccceeccc-ccccccccccc-ccccccchhhcCCCcccc
Confidence 56899999999995 55543 33333 469999999999998864
No 16
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.51 E-value=1.7e-07 Score=63.67 Aligned_cols=126 Identities=18% Similarity=0.188 Sum_probs=68.8
Q ss_pred ceeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHH-------
Q 037671 34 KNLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVV------- 106 (187)
Q Consensus 34 ~~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~------- 106 (187)
+.+++.++.+++- . -.+++++|+.|++++| .+++-. .+ ..+++|+.|+++++......++.
T Consensus 43 ~~L~l~~~~i~~l--~-~l~~l~nL~~L~Ls~N----~l~~~~--~l---~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~ 110 (199)
T d2omxa2 43 TTLQADRLGIKSI--D-GVEYLNNLTQINFSNN----QLTDIT--PL---KNLTKLVDILMNNNQIADITPLANLTNLTG 110 (199)
T ss_dssp CEEECTTSCCCCC--T-TGGGCTTCCEEECCSS----CCCCCG--GG---TTCTTCCEEECCSSCCCCCGGGTTCTTCSE
T ss_pred CEEECCCCCCCCc--c-ccccCCCcCcCccccc----cccCcc--cc---cCCccccccccccccccccccccccccccc
Confidence 4566666666542 1 1356788888888876 333311 11 12445555555444311111110
Q ss_pred -----------HHHhcCCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCCC
Q 037671 107 -----------QLISRASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTR 175 (187)
Q Consensus 107 -----------~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~ 175 (187)
.....+++|+.|+++++.+..- .. ...++.++.|++.+| .+++-. . ..++++|++|++++|+
T Consensus 111 L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~-l~~~~~L~~L~l~~n-~l~~l~--~-l~~l~~L~~L~ls~N~ 183 (199)
T d2omxa2 111 LTLFNNQITDIDPLKNLTNLNRLELSSNTISDI--SA-LSGLTSLQQLNFSSN-QVTDLK--P-LANLTTLERLDISSNK 183 (199)
T ss_dssp EECCSSCCCCCGGGTTCTTCSEEECCSSCCCCC--GG-GTTCTTCSEEECCSS-CCCCCG--G-GTTCTTCCEEECCSSC
T ss_pred ccccccccccccccchhhhhHHhhhhhhhhccc--cc-ccccccccccccccc-cccCCc--c-ccCCCCCCEEECCCCC
Confidence 0123456677777776555431 11 234677777877764 444322 1 3468899999999998
Q ss_pred CCH
Q 037671 176 LPL 178 (187)
Q Consensus 176 i~~ 178 (187)
+++
T Consensus 184 i~~ 186 (199)
T d2omxa2 184 VSD 186 (199)
T ss_dssp CCC
T ss_pred CCC
Confidence 876
No 17
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.42 E-value=1.4e-08 Score=69.26 Aligned_cols=125 Identities=15% Similarity=0.190 Sum_probs=82.0
Q ss_pred ceeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccchh-hhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcC
Q 037671 34 KNLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITDN-GLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRA 112 (187)
Q Consensus 34 ~~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~-~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 112 (187)
..+++.+++++.- .. +..+++|+.|++++| .+++- ++.. ..++|+.|+++++. ++.- .. ...+
T Consensus 51 ~~L~Ls~n~I~~i--~~-l~~l~~L~~L~Ls~N----~i~~i~~~~~-----~~~~L~~L~l~~N~-i~~l--~~-~~~l 114 (198)
T d1m9la_ 51 KHLALSTNNIEKI--SS-LSGMENLRILSLGRN----LIKKIENLDA-----VADTLEELWISYNQ-IASL--SG-IEKL 114 (198)
T ss_dssp CEEECSEEEESCC--CC-HHHHTTCCEEECCEE----EECSCSSHHH-----HHHHCCEEECSEEE-CCCH--HH-HHHH
T ss_pred ceeECcccCCCCc--cc-ccCCccccChhhccc----cccccccccc-----cccccccccccccc-cccc--cc-cccc
Confidence 4566666666542 22 456789999999987 45431 2211 24679999998775 6642 22 3347
Q ss_pred CCCCEEEecCCCCCHH-HHHHHHhcCCccceeeccCCCCCcHH---------HHHHHHhcCCCCcEEEeeCCCCCH
Q 037671 113 SSLQHLNIGGTFITDE-SLYAIANSCPQLKSIVLWSCRQVTGN---------GLLFLVNKCGRLESINVWGTRLPL 178 (187)
Q Consensus 113 ~~L~~L~l~~~~~~~~-~~~~l~~~~~~L~~L~l~~~~~~~~~---------~~~~l~~~~~~L~~L~l~~~~i~~ 178 (187)
++|+.|++++|.+++- .+..+ ..+|+|+.|+++++ .+... .-..+...+|+|+.|| +..|++
T Consensus 115 ~~L~~L~L~~N~i~~~~~~~~l-~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD--~~~I~~ 186 (198)
T d1m9la_ 115 VNLRVLYMSNNKITNWGEIDKL-AALDKLEDLLLAGN-PLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHSSEEEESEEECCCHHHHHHH-TTTTTCSEEEECSS-HHHHHHCTTTTHHHHHHHHHHHCSSCCEES--SGGGTT
T ss_pred ccccccccccchhccccccccc-cCCCccceeecCCC-ccccCcccccchhhHHHHHHHHCCCcCEeC--CccCCH
Confidence 8999999999888764 34444 45999999999985 33221 1223456799999987 445553
No 18
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.42 E-value=1e-07 Score=59.97 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=79.6
Q ss_pred eeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCC
Q 037671 35 NLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASS 114 (187)
Q Consensus 35 ~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 114 (187)
.+++++++++.- .. ...++.|++|++++| .++.-. ..+ ..+++|+.|+++++. ++.- .. ...+++
T Consensus 2 ~L~Ls~n~l~~l--~~-l~~l~~L~~L~ls~N----~l~~lp-~~~---~~l~~L~~L~l~~N~-i~~l--~~-~~~l~~ 66 (124)
T d1dcea3 2 VLHLAHKDLTVL--CH-LEQLLLVTHLDLSHN----RLRALP-PAL---AALRCLEVLQASDNA-LENV--DG-VANLPR 66 (124)
T ss_dssp EEECTTSCCSSC--CC-GGGGTTCCEEECCSS----CCCCCC-GGG---GGCTTCCEEECCSSC-CCCC--GG-GTTCSS
T ss_pred EEEcCCCCCCCC--cc-cccCCCCCEEECCCC----ccCcch-hhh---hhhhccccccccccc-cccc--Cc-cccccc
Confidence 355666666532 22 456789999999987 343311 112 237899999999875 5542 22 356899
Q ss_pred CCEEEecCCCCCHH-HHHHHHhcCCccceeeccCCCCCcHH--HHHHHHhcCCCCcEEE
Q 037671 115 LQHLNIGGTFITDE-SLYAIANSCPQLKSIVLWSCRQVTGN--GLLFLVNKCGRLESIN 170 (187)
Q Consensus 115 L~~L~l~~~~~~~~-~~~~l~~~~~~L~~L~l~~~~~~~~~--~~~~l~~~~~~L~~L~ 170 (187)
|+.|++++|.+++- .+..+ ..+|+|+.|+++++ .+++. ....+...+|+|+.|.
T Consensus 67 L~~L~l~~N~i~~~~~~~~l-~~~~~L~~L~l~~N-~i~~~~~~~~~l~~~lp~L~~Ll 123 (124)
T d1dcea3 67 LQELLLCNNRLQQSAAIQPL-VSCPRLVLLNLQGN-SLCQEEGIQERLAEMLPSVSSIL 123 (124)
T ss_dssp CCEEECCSSCCCSSSTTGGG-GGCTTCCEEECTTS-GGGGSSSCTTHHHHHCTTCSEEE
T ss_pred cCeEECCCCccCCCCCchhh-cCCCCCCEEECCCC-cCCcCccHHHHHHHHCcCcceEe
Confidence 99999999887753 23333 45899999999984 55432 2455677789998874
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.32 E-value=1.1e-06 Score=60.05 Aligned_cols=125 Identities=14% Similarity=0.164 Sum_probs=68.2
Q ss_pred ceeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCC
Q 037671 34 KNLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRAS 113 (187)
Q Consensus 34 ~~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 113 (187)
..+.+.++.++... . .+++++|++|++++| .+++-. .+ ..+++|+.|+++++. ++.- .. ...++
T Consensus 49 ~~L~l~~~~i~~l~--~-l~~l~~L~~L~L~~n----~i~~l~--~~---~~l~~L~~L~l~~n~-i~~l--~~-l~~l~ 112 (210)
T d1h6ta2 49 DQIIANNSDIKSVQ--G-IQYLPNVTKLFLNGN----KLTDIK--PL---ANLKNLGWLFLDENK-VKDL--SS-LKDLK 112 (210)
T ss_dssp CEEECTTSCCCCCT--T-GGGCTTCCEEECCSS----CCCCCG--GG---TTCTTCCEEECCSSC-CCCG--GG-GTTCT
T ss_pred cEEECcCCCCCCch--h-HhhCCCCCEEeCCCc----cccCcc--cc---ccCcccccccccccc-cccc--cc-ccccc
Confidence 45666666655321 1 457888888888865 444321 11 235667777776654 4431 11 22345
Q ss_pred CCCEEEecCCCCCHH-HHH------------------HHHhcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCC
Q 037671 114 SLQHLNIGGTFITDE-SLY------------------AIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGT 174 (187)
Q Consensus 114 ~L~~L~l~~~~~~~~-~~~------------------~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~ 174 (187)
+|+.|+++++.+.+- .+. .....+++|++++++++ .+++- .. ...+++|++|++++|
T Consensus 113 ~L~~L~l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n-~l~~i--~~-l~~l~~L~~L~Ls~N 188 (210)
T d1h6ta2 113 KLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDN-QISDI--VP-LAGLTKLQNLYLSKN 188 (210)
T ss_dssp TCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSS-CCCCC--GG-GTTCTTCCEEECCSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccc--cc-ccCCCCCCEEECCCC
Confidence 555555555332210 000 11234677888888774 44432 12 346788888888888
Q ss_pred CCCH
Q 037671 175 RLPL 178 (187)
Q Consensus 175 ~i~~ 178 (187)
.+++
T Consensus 189 ~i~~ 192 (210)
T d1h6ta2 189 HISD 192 (210)
T ss_dssp CCCB
T ss_pred CCCC
Confidence 7764
No 20
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.22 E-value=7.8e-08 Score=65.06 Aligned_cols=110 Identities=18% Similarity=0.138 Sum_probs=71.3
Q ss_pred CCCcEEEeeeccCCcccchhh-hhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHH
Q 037671 56 YSLKELEISRSRWGCQITDNG-LYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYAIA 134 (187)
Q Consensus 56 ~~L~~L~l~~~~~~~~~~~~~-l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~ 134 (187)
+++++|+|++| .++... ...+ ...++|++|+++++. +..... ......++|+.|++++|.++.-.. ...
T Consensus 29 ~~l~~L~Ls~N----~i~~~~~~~~f---~~l~~L~~L~L~~N~-i~~~~~-~~~~~~~~L~~L~Ls~N~l~~l~~-~~F 98 (192)
T d1w8aa_ 29 LHTTELLLNDN----ELGRISSDGLF---GRLPHLVKLELKRNQ-LTGIEP-NAFEGASHIQELQLGENKIKEISN-KMF 98 (192)
T ss_dssp TTCSEEECCSC----CCCSBCCSCSG---GGCTTCCEEECCSSC-CCCBCT-TTTTTCTTCCEEECCSCCCCEECS-SSS
T ss_pred CCCCEEEeCCC----CCccccccccc---CCCceEeeeeccccc-cccccc-cccccccccceeeeccccccccCH-HHH
Confidence 56999999987 343211 1111 236889999998765 443222 223457899999999987663111 123
Q ss_pred hcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCCCCC
Q 037671 135 NSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTRLP 177 (187)
Q Consensus 135 ~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~i~ 177 (187)
.+++.|++|+++++ .++.-.- ..+..+++|++|++++|.+.
T Consensus 99 ~~l~~L~~L~L~~N-~l~~i~~-~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 99 LGLHQLKTLNLYDN-QISCVMP-GSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp TTCTTCCEEECCSS-CCCEECT-TSSTTCTTCCEEECTTCCBC
T ss_pred hCCCcccccccCCc-cccccCH-HHhcCCcccccccccccccc
Confidence 56889999999884 6554321 12346889999999999765
No 21
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.14 E-value=5.2e-06 Score=56.06 Aligned_cols=103 Identities=15% Similarity=0.225 Sum_probs=66.0
Q ss_pred CCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHH
Q 037671 55 AYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYAIA 134 (187)
Q Consensus 55 ~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~ 134 (187)
++.++.|+++++ .+++ +..+ ..+++|+.|+++++. ++... . ...+++|+.|+++++.+..-. . .
T Consensus 39 l~~l~~L~l~~~----~i~~--l~~l---~~l~nL~~L~Ls~N~-l~~~~--~-l~~l~~L~~L~l~~n~~~~~~--~-l 102 (199)
T d2omxa2 39 LDQVTTLQADRL----GIKS--IDGV---EYLNNLTQINFSNNQ-LTDIT--P-LKNLTKLVDILMNNNQIADIT--P-L 102 (199)
T ss_dssp HTTCCEEECTTS----CCCC--CTTG---GGCTTCCEEECCSSC-CCCCG--G-GTTCTTCCEEECCSSCCCCCG--G-G
T ss_pred hcCCCEEECCCC----CCCC--cccc---ccCCCcCcCcccccc-ccCcc--c-ccCCccccccccccccccccc--c-c
Confidence 478999999865 4444 1222 347999999999875 65422 2 456889999999986554321 1 2
Q ss_pred hcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCCCCC
Q 037671 135 NSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTRLP 177 (187)
Q Consensus 135 ~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~i~ 177 (187)
..++.|+.|+++++......+ ...+++|+.|++++|.++
T Consensus 103 ~~l~~L~~L~l~~~~~~~~~~----~~~l~~L~~L~l~~n~l~ 141 (199)
T d2omxa2 103 ANLTNLTGLTLFNNQITDIDP----LKNLTNLNRLELSSNTIS 141 (199)
T ss_dssp TTCTTCSEEECCSSCCCCCGG----GTTCTTCSEEECCSSCCC
T ss_pred ccccccccccccccccccccc----cchhhhhHHhhhhhhhhc
Confidence 357778888887654433222 234666777777766554
No 22
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.12 E-value=3.3e-06 Score=57.58 Aligned_cols=78 Identities=22% Similarity=0.256 Sum_probs=54.9
Q ss_pred CCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHHh
Q 037671 56 YSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYAIAN 135 (187)
Q Consensus 56 ~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~ 135 (187)
..+++|+++++ .+++- ..+ ..+++|++|+++++. ++... . ...+++|+.|+++++.+++ +.. ..
T Consensus 46 ~~L~~L~l~~~----~i~~l--~~l---~~l~~L~~L~L~~n~-i~~l~--~-~~~l~~L~~L~l~~n~i~~--l~~-l~ 109 (210)
T d1h6ta2 46 NSIDQIIANNS----DIKSV--QGI---QYLPNVTKLFLNGNK-LTDIK--P-LANLKNLGWLFLDENKVKD--LSS-LK 109 (210)
T ss_dssp HTCCEEECTTS----CCCCC--TTG---GGCTTCCEEECCSSC-CCCCG--G-GTTCTTCCEEECCSSCCCC--GGG-GT
T ss_pred cCccEEECcCC----CCCCc--hhH---hhCCCCCEEeCCCcc-ccCcc--c-cccCccccccccccccccc--ccc-cc
Confidence 57899999865 44432 112 347999999999885 65422 2 2468999999999988875 222 34
Q ss_pred cCCccceeeccCCC
Q 037671 136 SCPQLKSIVLWSCR 149 (187)
Q Consensus 136 ~~~~L~~L~l~~~~ 149 (187)
.+++|+.|++.++.
T Consensus 110 ~l~~L~~L~l~~~~ 123 (210)
T d1h6ta2 110 DLKKLKSLSLEHNG 123 (210)
T ss_dssp TCTTCCEEECTTSC
T ss_pred cccccccccccccc
Confidence 57889999998763
No 23
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.05 E-value=5.3e-06 Score=57.11 Aligned_cols=126 Identities=12% Similarity=0.167 Sum_probs=72.0
Q ss_pred ceeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHH--------
Q 037671 34 KNLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGV-------- 105 (187)
Q Consensus 34 ~~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~-------- 105 (187)
+.++++++.+.... -...++.++.++++++ .+++ +..+ ..+++|+.+.++.+.......+
T Consensus 66 ~~L~ls~n~i~~~~---~l~~l~~l~~l~~~~n----~~~~--i~~l---~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~ 133 (227)
T d1h6ua2 66 IGLELKDNQITDLA---PLKNLTKITELELSGN----PLKN--VSAI---AGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133 (227)
T ss_dssp CEEECCSSCCCCCG---GGTTCCSCCEEECCSC----CCSC--CGGG---TTCTTCCEEECTTSCCCCCGGGTTCTTCCE
T ss_pred cEeecCCceeeccc---cccccccccccccccc----cccc--cccc---cccccccccccccccccccchhccccchhh
Confidence 34555555544321 1456677888888765 2222 1112 1245566666654431111110
Q ss_pred ----------HHHHhcCCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCCC
Q 037671 106 ----------VQLISRASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTR 175 (187)
Q Consensus 106 ----------~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~ 175 (187)
......+++|+.|+++++.+++.. . ..++++|++|++++| .+++-. . ...+|+|++|++++|+
T Consensus 134 l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~--~-l~~l~~L~~L~Ls~n-~l~~l~--~-l~~l~~L~~L~Ls~N~ 206 (227)
T d1h6ua2 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLT--P-LANLSKLTTLKADDN-KISDIS--P-LASLPNLIEVHLKNNQ 206 (227)
T ss_dssp EECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCG--G-GTTCTTCCEEECCSS-CCCCCG--G-GGGCTTCCEEECTTSC
T ss_pred hhchhhhhchhhhhccccccccccccccccccch--h-hcccccceecccCCC-ccCCCh--h-hcCCCCCCEEECcCCc
Confidence 011234678999999887665421 1 345888999999885 555422 2 3568999999999998
Q ss_pred CCH
Q 037671 176 LPL 178 (187)
Q Consensus 176 i~~ 178 (187)
+++
T Consensus 207 lt~ 209 (227)
T d1h6ua2 207 ISD 209 (227)
T ss_dssp CCB
T ss_pred CCC
Confidence 764
No 24
>d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.01 E-value=8.3e-07 Score=55.13 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=28.0
Q ss_pred CccccccchhHHHHHHHhhHHHHHHh-hhhhccc
Q 037671 1 FLFVFVIPFVCLLRVSSVCKKWKLGV-KQSLARR 33 (187)
Q Consensus 1 ~I~~~l~~~~~~~~~~~vck~w~~~~-~~~l~~~ 33 (187)
+||+||+ .+|++.+++|||+|++++ .+.+|+.
T Consensus 25 ~Ils~Ld-~~dL~~~s~Vck~W~~l~~d~~lWk~ 57 (118)
T d1p22a1 25 NILSYLD-AKSLCAAELVCKEWYRVTSDGMLWKK 57 (118)
T ss_dssp HHHTTCC-HHHHHHHHHHCHHHHHHHHHTTHHHH
T ss_pred HHHHcCC-HHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 4899999 599999999999999977 5677765
No 25
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=97.98 E-value=9.1e-06 Score=59.81 Aligned_cols=124 Identities=18% Similarity=0.222 Sum_probs=72.0
Q ss_pred ceeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHH----------
Q 037671 34 KNLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDK---------- 103 (187)
Q Consensus 34 ~~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~---------- 103 (187)
+.+.+.++.+++.. ....+++++.++++++ .+++-. .+ ..+++|+.|+++++. ++..
T Consensus 222 ~~L~l~~n~l~~~~---~l~~l~~L~~L~l~~n----~l~~~~--~~---~~~~~L~~L~l~~~~-l~~~~~~~~~~~l~ 288 (384)
T d2omza2 222 DELSLNGNQLKDIG---TLASLTNLTDLDLANN----QISNLA--PL---SGLTKLTELKLGANQ-ISNISPLAGLTALT 288 (384)
T ss_dssp CEEECCSSCCCCCG---GGGGCTTCSEEECCSS----CCCCCG--GG---TTCTTCSEEECCSSC-CCCCGGGTTCTTCS
T ss_pred CEEECCCCCCCCcc---hhhcccccchhccccC----ccCCCC--cc---cccccCCEeeccCcc-cCCCCccccccccc
Confidence 34566666555421 2345677777777755 333211 11 224566666665442 1110
Q ss_pred ----------HHHHHHhcCCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeC
Q 037671 104 ----------GVVQLISRASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWG 173 (187)
Q Consensus 104 ----------~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~ 173 (187)
++. ....+++++.|+++++.+++- .. ...+|+|++|++++| .+++-. .+ ..+|+|++|++++
T Consensus 289 ~l~~~~n~l~~~~-~~~~~~~l~~L~ls~n~l~~l--~~-l~~l~~L~~L~L~~n-~l~~l~--~l-~~l~~L~~L~l~~ 360 (384)
T d2omza2 289 NLELNENQLEDIS-PISNLKNLTYLTLYFNNISDI--SP-VSSLTKLQRLFFANN-KVSDVS--SL-ANLTNINWLSAGH 360 (384)
T ss_dssp EEECCSSCCSCCG-GGGGCTTCSEEECCSSCCSCC--GG-GGGCTTCCEEECCSS-CCCCCG--GG-GGCTTCCEEECCS
T ss_pred ccccccccccccc-ccchhcccCeEECCCCCCCCC--cc-cccCCCCCEEECCCC-CCCCCh--hH-cCCCCCCEEECCC
Confidence 011 134467888888888776642 12 356888999999886 555432 23 4688899999988
Q ss_pred CCCCH
Q 037671 174 TRLPL 178 (187)
Q Consensus 174 ~~i~~ 178 (187)
|++++
T Consensus 361 N~l~~ 365 (384)
T d2omza2 361 NQISD 365 (384)
T ss_dssp SCCCB
T ss_pred CcCCC
Confidence 88764
No 26
>d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.94 E-value=9.1e-07 Score=53.26 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=27.8
Q ss_pred CccccccchhHHHHHHHhhHHHHHHh-h-hhhcccc
Q 037671 1 FLFVFVIPFVCLLRVSSVCKKWKLGV-K-QSLARRK 34 (187)
Q Consensus 1 ~I~~~l~~~~~~~~~~~vck~w~~~~-~-~~l~~~~ 34 (187)
+||+||+ .+|++++++|||+|++++ . +.+|++.
T Consensus 16 ~I~s~Ld-~~dL~~~s~Vcr~W~~~~~~d~~LWr~l 50 (100)
T d1nexb1 16 KIFNYLQ-FEDIINSLGVSQNWNKIIRKSTSLWKKL 50 (100)
T ss_dssp HHHTTSC-HHHHHHHTTTCHHHHHHHHTCSHHHHHH
T ss_pred HHHHCCC-HHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 4899999 599999999999999976 3 4688653
No 27
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.91 E-value=1.4e-06 Score=62.18 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=53.4
Q ss_pred CCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcCCC
Q 037671 86 ISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGR 165 (187)
Q Consensus 86 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~ 165 (187)
+++|+.|+++++. ++...- .....+++|+.++++++.++.-.- .....+++|++|+++++ .+....... ...+++
T Consensus 152 ~~~L~~L~l~~N~-l~~l~~-~~f~~l~~L~~l~l~~N~l~~i~~-~~f~~l~~L~~L~l~~N-~i~~~~~~~-~~~~~~ 226 (284)
T d1ozna_ 152 LGNLTHLFLHGNR-ISSVPE-RAFRGLHSLDRLLLHQNRVAHVHP-HAFRDLGRLMTLYLFAN-NLSALPTEA-LAPLRA 226 (284)
T ss_dssp CTTCCEEECCSSC-CCEECT-TTTTTCTTCCEEECCSSCCCEECT-TTTTTCTTCCEEECCSS-CCSCCCHHH-HTTCTT
T ss_pred ccchhhcccccCc-ccccch-hhhccccccchhhhhhccccccCh-hHhhhhhhccccccccc-ccccccccc-cccccc
Confidence 5667777777664 433211 122346778888888766553211 12345778888888874 555444333 346888
Q ss_pred CcEEEeeCCCCC
Q 037671 166 LESINVWGTRLP 177 (187)
Q Consensus 166 L~~L~l~~~~i~ 177 (187)
|+.|++++|++.
T Consensus 227 L~~L~l~~N~l~ 238 (284)
T d1ozna_ 227 LQYLRLNDNPWV 238 (284)
T ss_dssp CCEEECCSSCEE
T ss_pred cCEEEecCCCCC
Confidence 888988888664
No 28
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=97.89 E-value=1.3e-05 Score=59.04 Aligned_cols=126 Identities=17% Similarity=0.219 Sum_probs=80.8
Q ss_pred ceeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccch--------------hhhhhhhhhccCCCccEEEecCCCC
Q 037671 34 KNLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITD--------------NGLYRMSFAKCISNLTSISLWGLTG 99 (187)
Q Consensus 34 ~~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~--------------~~l~~l~~~~~~~~L~~L~l~~~~~ 99 (187)
..+.+.++.++... -...+++|+.++++++... .+.. ..+..+.....+++++.|+++++.
T Consensus 244 ~~L~l~~n~l~~~~---~~~~~~~L~~L~l~~~~l~-~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~- 318 (384)
T d2omza2 244 TDLDLANNQISNLA---PLSGLTKLTELKLGANQIS-NISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNN- 318 (384)
T ss_dssp SEEECCSSCCCCCG---GGTTCTTCSEEECCSSCCC-CCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSC-
T ss_pred chhccccCccCCCC---cccccccCCEeeccCcccC-CCCccccccccccccccccccccccccchhcccCeEECCCCC-
Confidence 45666666554321 1345788888888765311 0000 011111112457889999998775
Q ss_pred CCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCC
Q 037671 100 ITDKGVVQLISRASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGT 174 (187)
Q Consensus 100 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~ 174 (187)
+++.. . ...+++|+.|++++|.+++ +..+ ..+|+|++|++++| .+++-. . ...+++|+.|++++|
T Consensus 319 l~~l~--~-l~~l~~L~~L~L~~n~l~~--l~~l-~~l~~L~~L~l~~N-~l~~l~--~-l~~l~~L~~L~L~~N 383 (384)
T d2omza2 319 ISDIS--P-VSSLTKLQRLFFANNKVSD--VSSL-ANLTNINWLSAGHN-QISDLT--P-LANLTRITQLGLNDQ 383 (384)
T ss_dssp CSCCG--G-GGGCTTCCEEECCSSCCCC--CGGG-GGCTTCCEEECCSS-CCCBCG--G-GTTCTTCSEEECCCE
T ss_pred CCCCc--c-cccCCCCCEEECCCCCCCC--ChhH-cCCCCCCEEECCCC-cCCCCh--h-hccCCCCCEeeCCCC
Confidence 55432 2 4569999999999988775 2234 45899999999885 665432 2 357899999999986
No 29
>d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.83 E-value=1.5e-06 Score=52.39 Aligned_cols=32 Identities=25% Similarity=0.622 Sum_probs=27.6
Q ss_pred CccccccchhHHHHHHHhhHHHHHHh-hhhhccc
Q 037671 1 FLFVFVIPFVCLLRVSSVCKKWKLGV-KQSLARR 33 (187)
Q Consensus 1 ~I~~~l~~~~~~~~~~~vck~w~~~~-~~~l~~~ 33 (187)
+||+||++ +|++++++|||+|++++ .+.+|+.
T Consensus 29 ~Ils~Ld~-~dL~~~~~vcr~w~~l~~~~~lW~~ 61 (102)
T d2ovrb1 29 YVLSFLEP-KDLLQAAQTCRYWRILAEDNLLWRE 61 (102)
T ss_dssp HHHTTSCH-HHHHHHTTSCHHHHHHHTCSHHHHH
T ss_pred HHHHcCCH-HHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 48999995 99999999999999977 5577754
No 30
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.82 E-value=3.4e-06 Score=55.21 Aligned_cols=83 Identities=18% Similarity=0.261 Sum_probs=55.8
Q ss_pred ccCCCccEEEecCCCCCCH-HHHHHHHhcCCCCCEEEecCCCCCHH-HHHHHHhcCCccceeeccCCCCCc------HHH
Q 037671 84 KCISNLTSISLWGLTGITD-KGVVQLISRASSLQHLNIGGTFITDE-SLYAIANSCPQLKSIVLWSCRQVT------GNG 155 (187)
Q Consensus 84 ~~~~~L~~L~l~~~~~~~~-~~~~~~~~~~~~L~~L~l~~~~~~~~-~~~~l~~~~~~L~~L~l~~~~~~~------~~~ 155 (187)
..+++|+.|+++++. ++. .++......+++|+.|++++|.+++- .+..+. .+.|++|++.++ .++ ...
T Consensus 62 ~~~~~L~~L~Ls~N~-i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~--~~~L~~L~L~~N-pl~~~~~~~~~y 137 (162)
T d1koha1 62 ENIPELLSLNLSNNR-LYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIK--GLKLEELWLDGN-SLSDTFRDQSTY 137 (162)
T ss_dssp HHCTTCCCCCCCSSC-CCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHT--TCCCSSCCCTTS-TTSSSSSSHHHH
T ss_pred HhCCCCCEeeCCCcc-ccCCchhHHHHhhCCcccccccccCccccchhhhhhh--ccccceeecCCC-CcCcCcccchhH
Confidence 457888888888775 544 23444456688999999999877752 333332 446888888874 332 234
Q ss_pred HHHHHhcCCCCcEEE
Q 037671 156 LLFLVNKCGRLESIN 170 (187)
Q Consensus 156 ~~~l~~~~~~L~~L~ 170 (187)
...+.+.+|+|+.||
T Consensus 138 ~~~i~~~~P~L~~LD 152 (162)
T d1koha1 138 ISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHTTSTTCCEET
T ss_pred HHHHHHHCCCCCEEC
Confidence 556677889998886
No 31
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.82 E-value=2.3e-06 Score=61.52 Aligned_cols=89 Identities=10% Similarity=0.130 Sum_probs=52.2
Q ss_pred cCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHH-----H
Q 037671 85 CISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLF-----L 159 (187)
Q Consensus 85 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~-----l 159 (187)
.++.++.|+++++. ++.... .....+++|++|+++++.++. +..-...+++|++|+++++ .++.-+-.. .
T Consensus 193 ~~~~l~~L~~s~n~-l~~~~~-~~~~~l~~L~~L~L~~N~L~~--lp~~l~~l~~L~~L~Ls~N-~i~~i~~~~f~~~~~ 267 (305)
T d1xkua_ 193 GLNNLAKLGLSFNS-ISAVDN-GSLANTPHLRELHLNNNKLVK--VPGGLADHKYIQVVYLHNN-NISAIGSNDFCPPGY 267 (305)
T ss_dssp TCTTCCEEECCSSC-CCEECT-TTGGGSTTCCEEECCSSCCSS--CCTTTTTCSSCCEEECCSS-CCCCCCTTSSSCSSC
T ss_pred cccccccccccccc-cccccc-ccccccccceeeecccccccc--cccccccccCCCEEECCCC-ccCccChhhccCcch
Confidence 35677777777664 444322 222357888888888866552 1111234778888888874 554322111 1
Q ss_pred HhcCCCCcEEEeeCCCCCH
Q 037671 160 VNKCGRLESINVWGTRLPL 178 (187)
Q Consensus 160 ~~~~~~L~~L~l~~~~i~~ 178 (187)
....++|+.|++++|++..
T Consensus 268 ~~~~~~L~~L~L~~N~~~~ 286 (305)
T d1xkua_ 268 NTKKASYSGVSLFSNPVQY 286 (305)
T ss_dssp CTTSCCCSEEECCSSSSCG
T ss_pred hcccCCCCEEECCCCcCcc
Confidence 2334678888888887653
No 32
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=97.81 E-value=2.8e-05 Score=53.29 Aligned_cols=79 Identities=19% Similarity=0.228 Sum_probs=58.2
Q ss_pred ccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcC
Q 037671 84 KCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKC 163 (187)
Q Consensus 84 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~ 163 (187)
..+++|+.|+++++. +++.. . ...+++|+.|+++++.+++ +.. ...+|+|++|++++| .+++-. . .+.+
T Consensus 148 ~~~~~L~~L~l~~n~-~~~~~--~-l~~l~~L~~L~Ls~n~l~~--l~~-l~~l~~L~~L~Ls~N-~lt~i~--~-l~~l 216 (227)
T d1h6ua2 148 AGLTNLQYLSIGNAQ-VSDLT--P-LANLSKLTTLKADDNKISD--ISP-LASLPNLIEVHLKNN-QISDVS--P-LANT 216 (227)
T ss_dssp GGCTTCCEEECCSSC-CCCCG--G-GTTCTTCCEEECCSSCCCC--CGG-GGGCTTCCEEECTTS-CCCBCG--G-GTTC
T ss_pred ccccccccccccccc-cccch--h-hcccccceecccCCCccCC--Chh-hcCCCCCCEEECcCC-cCCCCc--c-cccC
Confidence 447889999998775 43321 1 3568999999999987765 222 356899999999996 676543 2 3579
Q ss_pred CCCcEEEeeC
Q 037671 164 GRLESINVWG 173 (187)
Q Consensus 164 ~~L~~L~l~~ 173 (187)
++|+.|++++
T Consensus 217 ~~L~~L~lsn 226 (227)
T d1h6ua2 217 SNLFIVTLTN 226 (227)
T ss_dssp TTCCEEEEEE
T ss_pred CCCCEEEeeC
Confidence 9999999974
No 33
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.81 E-value=1.5e-05 Score=52.05 Aligned_cols=89 Identities=18% Similarity=0.232 Sum_probs=62.2
Q ss_pred HHHHHhcCCCCcEEEeeeccCCcccchh-hhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCC
Q 037671 48 TARLVGYAYSLKELEISRSRWGCQITDN-GLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFIT 126 (187)
Q Consensus 48 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~-~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 126 (187)
+..+...++.|+.|++++| .+++- ++... ...+++|+.|+++++. +++-.-....+ ...|+.|++++|.+.
T Consensus 57 l~~~~~~~~~L~~L~Ls~N----~i~~l~~~~~~--~~~l~~L~~L~Ls~N~-i~~l~~l~~l~-~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 57 LRIIEENIPELLSLNLSNN----RLYRLDDMSSI--VQKAPNLKILNLSGNE-LKSERELDKIK-GLKLEELWLDGNSLS 128 (162)
T ss_dssp HHHHHHHCTTCCCCCCCSS----CCCCCSGGGTH--HHHSTTCCCCCCTTSC-CCCGGGHHHHT-TCCCSSCCCTTSTTS
T ss_pred hHHHHHhCCCCCEeeCCCc----cccCCchhHHH--HhhCCcccccccccCc-cccchhhhhhh-ccccceeecCCCCcC
Confidence 3455567899999999987 55543 22111 2458999999999886 55432223333 567999999998765
Q ss_pred H------HHHHHHHhcCCccceee
Q 037671 127 D------ESLYAIANSCPQLKSIV 144 (187)
Q Consensus 127 ~------~~~~~l~~~~~~L~~L~ 144 (187)
. .....+...+|+|+.||
T Consensus 129 ~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 129 DTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp SSSSSHHHHHHHHHTTSTTCCEET
T ss_pred cCcccchhHHHHHHHHCCCCCEEC
Confidence 2 34567788899999987
No 34
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.80 E-value=6.8e-07 Score=60.24 Aligned_cols=88 Identities=11% Similarity=0.110 Sum_probs=61.6
Q ss_pred CCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcCCC
Q 037671 86 ISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGR 165 (187)
Q Consensus 86 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~ 165 (187)
.+++++|+++++. ++...........++|+.|+++++.+..-.. .....++.|++|+++++ .++.-.- ..+.++++
T Consensus 28 p~~l~~L~Ls~N~-i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~-~~~~~~~~L~~L~Ls~N-~l~~l~~-~~F~~l~~ 103 (192)
T d1w8aa_ 28 PLHTTELLLNDNE-LGRISSDGLFGRLPHLVKLELKRNQLTGIEP-NAFEGASHIQELQLGEN-KIKEISN-KMFLGLHQ 103 (192)
T ss_dssp CTTCSEEECCSCC-CCSBCCSCSGGGCTTCCEEECCSSCCCCBCT-TTTTTCTTCCEEECCSC-CCCEECS-SSSTTCTT
T ss_pred CCCCCEEEeCCCC-CcccccccccCCCceEeeeeccccccccccc-cccccccccceeeeccc-cccccCH-HHHhCCCc
Confidence 4689999999875 6432222233568999999999976653211 22345788999999985 6654332 23457899
Q ss_pred CcEEEeeCCCCC
Q 037671 166 LESINVWGTRLP 177 (187)
Q Consensus 166 L~~L~l~~~~i~ 177 (187)
|++|+|++|.++
T Consensus 104 L~~L~L~~N~l~ 115 (192)
T d1w8aa_ 104 LKTLNLYDNQIS 115 (192)
T ss_dssp CCEEECCSSCCC
T ss_pred ccccccCCcccc
Confidence 999999999875
No 35
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.71 E-value=5.3e-06 Score=58.55 Aligned_cols=17 Identities=18% Similarity=0.303 Sum_probs=11.7
Q ss_pred hcCCCCcEEEeeCCCCC
Q 037671 161 NKCGRLESINVWGTRLP 177 (187)
Q Consensus 161 ~~~~~L~~L~l~~~~i~ 177 (187)
..+++|+.+++++|.++
T Consensus 145 ~~l~~l~~l~l~~N~l~ 161 (266)
T d1p9ag_ 145 TPTPKLEKLSLANNNLT 161 (266)
T ss_dssp TTCTTCCEEECTTSCCS
T ss_pred cccccchhccccccccc
Confidence 34567788888877654
No 36
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.67 E-value=4.3e-06 Score=60.07 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=68.6
Q ss_pred hcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHH
Q 037671 53 GYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYA 132 (187)
Q Consensus 53 ~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 132 (187)
..++.|+.++++++ .++. +. ...+++|+.|+++++. .+.... .....++.++.|+++++.++.-.. .
T Consensus 147 ~~l~~L~~l~l~~n----~l~~-----l~-~~~~~~L~~L~l~~n~-~~~~~~-~~~~~~~~l~~L~~s~n~l~~~~~-~ 213 (305)
T d1xkua_ 147 QGMKKLSYIRIADT----NITT-----IP-QGLPPSLTELHLDGNK-ITKVDA-ASLKGLNNLAKLGLSFNSISAVDN-G 213 (305)
T ss_dssp GGCTTCCEEECCSS----CCCS-----CC-SSCCTTCSEEECTTSC-CCEECT-GGGTTCTTCCEEECCSSCCCEECT-T
T ss_pred ccccccCccccccC----Cccc-----cC-cccCCccCEEECCCCc-CCCCCh-hHhhcccccccccccccccccccc-c
Confidence 34556666666644 2221 11 1225788888887764 333222 223457889999999877664322 2
Q ss_pred HHhcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCCCCCH
Q 037671 133 IANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTRLPL 178 (187)
Q Consensus 133 l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~i~~ 178 (187)
...++++|++|++++| .++.-. .. ...+++|+.|++++|+++.
T Consensus 214 ~~~~l~~L~~L~L~~N-~L~~lp-~~-l~~l~~L~~L~Ls~N~i~~ 256 (305)
T d1xkua_ 214 SLANTPHLRELHLNNN-KLVKVP-GG-LADHKYIQVVYLHNNNISA 256 (305)
T ss_dssp TGGGSTTCCEEECCSS-CCSSCC-TT-TTTCSSCCEEECCSSCCCC
T ss_pred cccccccceeeecccc-cccccc-cc-cccccCCCEEECCCCccCc
Confidence 2346899999999986 554221 12 3458999999999998763
No 37
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.64 E-value=4.6e-06 Score=58.88 Aligned_cols=14 Identities=14% Similarity=-0.002 Sum_probs=7.1
Q ss_pred CCCCcEEEeeCCCC
Q 037671 163 CGRLESINVWGTRL 176 (187)
Q Consensus 163 ~~~L~~L~l~~~~i 176 (187)
.++|+.|+|++|+.
T Consensus 194 ~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 194 SHLLPFAFLHGNPW 207 (266)
T ss_dssp TCCCSEEECCSCCB
T ss_pred CCCCCEEEecCCCC
Confidence 44555555555543
No 38
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.61 E-value=4.6e-06 Score=59.40 Aligned_cols=113 Identities=16% Similarity=0.157 Sum_probs=68.4
Q ss_pred hcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHH
Q 037671 53 GYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYA 132 (187)
Q Consensus 53 ~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 132 (187)
..+++|+.|+++++ .+....... ....++|+.++++++. ++...- ...+.+++|+.|+++++.++.-.. .
T Consensus 102 ~~l~~L~~L~l~~n----~~~~~~~~~---~~~~~~L~~l~l~~N~-l~~i~~-~~f~~~~~L~~L~l~~N~l~~l~~-~ 171 (284)
T d1ozna_ 102 HGLGRLHTLHLDRC----GLQELGPGL---FRGLAALQYLYLQDNA-LQALPD-DTFRDLGNLTHLFLHGNRISSVPE-R 171 (284)
T ss_dssp TTCTTCCEEECTTS----CCCCCCTTT---TTTCTTCCEEECCSSC-CCCCCT-TTTTTCTTCCEEECCSSCCCEECT-T
T ss_pred cccccCCEEecCCc----ccccccccc---cchhcccchhhhcccc-ccccCh-hHhccccchhhcccccCcccccch-h
Confidence 45577888888765 222211111 1235778888887654 433211 123457889999999877653111 1
Q ss_pred HHhcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCCCCC
Q 037671 133 IANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTRLP 177 (187)
Q Consensus 133 l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~i~ 177 (187)
....++.|++++++++ .++...- .....+++|++|++++|.++
T Consensus 172 ~f~~l~~L~~l~l~~N-~l~~i~~-~~f~~l~~L~~L~l~~N~i~ 214 (284)
T d1ozna_ 172 AFRGLHSLDRLLLHQN-RVAHVHP-HAFRDLGRLMTLYLFANNLS 214 (284)
T ss_dssp TTTTCTTCCEEECCSS-CCCEECT-TTTTTCTTCCEEECCSSCCS
T ss_pred hhccccccchhhhhhc-cccccCh-hHhhhhhhcccccccccccc
Confidence 2245788999999875 5543321 22456889999999999664
No 39
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=97.24 E-value=1.3e-06 Score=63.09 Aligned_cols=35 Identities=14% Similarity=0.069 Sum_probs=15.0
Q ss_pred CCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccC
Q 037671 112 ASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWS 147 (187)
Q Consensus 112 ~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~ 147 (187)
+++|++|+++++.+..... .....++.|+.+++++
T Consensus 100 L~~L~~L~Ls~N~l~~~~~-~~~~~~~~L~~l~l~~ 134 (313)
T d1ogqa_ 100 LTQLHYLYITHTNVSGAIP-DFLSQIKTLVTLDFSY 134 (313)
T ss_dssp CTTCSEEEEEEECCEEECC-GGGGGCTTCCEEECCS
T ss_pred ccccchhhhcccccccccc-ccccchhhhccccccc
Confidence 5555555555543332111 1122344455555544
No 40
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.18 E-value=2e-05 Score=51.05 Aligned_cols=39 Identities=10% Similarity=0.087 Sum_probs=19.3
Q ss_pred CCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCC
Q 037671 86 ISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFIT 126 (187)
Q Consensus 86 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 126 (187)
.++|+.|+++++. ++...-. .+...++|++|+|++|.++
T Consensus 55 l~~L~~L~Ls~N~-l~~i~~~-~f~~l~~L~~L~Ls~N~l~ 93 (156)
T d2ifga3 55 LGELRNLTIVKSG-LRFVAPD-AFHFTPRLSRLNLSFNALE 93 (156)
T ss_dssp CCCCSEEECCSSC-CCEECTT-GGGSCSCCCEEECCSSCCS
T ss_pred ccccCcceeeccc-cCCcccc-cccccccccceeccCCCCc
Confidence 4566666665553 3332111 1233566666666665443
No 41
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=96.95 E-value=1.9e-05 Score=56.82 Aligned_cols=133 Identities=14% Similarity=0.123 Sum_probs=79.1
Q ss_pred ceeeecccccCHH-HHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcC
Q 037671 34 KNLSFAGWKMDDD-STARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRA 112 (187)
Q Consensus 34 ~~l~~~~~~l~~~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 112 (187)
..+++.+..+.-. .+..-+..+++|+.|+++++. .++..-...+ ..+++|++|+++++. +..... ......
T Consensus 53 ~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N---~l~g~iP~~i---~~L~~L~~L~Ls~N~-l~~~~~-~~~~~~ 124 (313)
T d1ogqa_ 53 NNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGIN---NLVGPIPPAI---AKLTQLHYLYITHTN-VSGAIP-DFLSQI 124 (313)
T ss_dssp EEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEET---TEESCCCGGG---GGCTTCSEEEEEEEC-CEEECC-GGGGGC
T ss_pred EEEECCCCCCCCCCCCChHHhcCcccccccccccc---cccccccccc---ccccccchhhhcccc-cccccc-ccccch
Confidence 4566666654421 122345578999999998621 3332222223 347899999998775 433211 223458
Q ss_pred CCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcCCC-CcEEEeeCCCCC
Q 037671 113 SSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGR-LESINVWGTRLP 177 (187)
Q Consensus 113 ~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~-L~~L~l~~~~i~ 177 (187)
+.|+.++++++.+....-.. ...++.++.++++++ .++...-..+. ..+. ++.+++++|.++
T Consensus 125 ~~L~~l~l~~N~~~~~~p~~-l~~l~~L~~l~l~~n-~l~~~ip~~~~-~l~~l~~~l~~~~n~l~ 187 (313)
T d1ogqa_ 125 KTLVTLDFSYNALSGTLPPS-ISSLPNLVGITFDGN-RISGAIPDSYG-SFSKLFTSMTISRNRLT 187 (313)
T ss_dssp TTCCEEECCSSEEESCCCGG-GGGCTTCCEEECCSS-CCEEECCGGGG-CCCTTCCEEECCSSEEE
T ss_pred hhhcccccccccccccCchh-hccCcccceeecccc-ccccccccccc-ccccccccccccccccc
Confidence 89999999986443221112 245889999999885 44432212223 3444 588999988664
No 42
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.80 E-value=3e-05 Score=53.54 Aligned_cols=111 Identities=8% Similarity=0.008 Sum_probs=56.1
Q ss_pred CCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecC-CCCCHHHHHHHH
Q 037671 56 YSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGG-TFITDESLYAIA 134 (187)
Q Consensus 56 ~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~~~~~~l~ 134 (187)
++++.|++++| .++.-....+ ..+++|++|+++++. +....-......+++++.+.+.+ +.+..... ...
T Consensus 29 ~~l~~L~Ls~n----~i~~l~~~~f---~~l~~L~~L~ls~n~-~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~-~~~ 99 (242)
T d1xwdc1 29 RNAIELRFVLT----KLRVIQKGAF---SGFGDLEKIEISQND-VLEVIEADVFSNLPKLHEIRIEKANNLLYINP-EAF 99 (242)
T ss_dssp SCCSEEEEESC----CCCEECTTTT---TTCTTCCEEEEESCT-TCCEECSSSEESCTTCCEEEEECCTTCCEECT-TSE
T ss_pred CCCCEEECcCC----cCCccChhHh---hccchhhhhhhcccc-ccceeecccccccccccccccccccccccccc-ccc
Confidence 46888888876 3332111111 236788888888765 22210011123467788887765 44432111 123
Q ss_pred hcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCCCC
Q 037671 135 NSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTRL 176 (187)
Q Consensus 135 ~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~i 176 (187)
..+++|+++++.++ .+++..........+.+..+....+.+
T Consensus 100 ~~l~~L~~l~l~~~-~l~~~~~~~~~~~l~~l~~~~~~n~~l 140 (242)
T d1xwdc1 100 QNLPNLQYLLISNT-GIKHLPDVHKIHSLQKVLLDIQDNINI 140 (242)
T ss_dssp ECCTTCCEEEEESC-CCCSCCCCTTTCBSSCEEEEEESCTTC
T ss_pred cccccccccccchh-hhccccccccccccccccccccccccc
Confidence 55788888888775 444332221222233444444444443
No 43
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=96.72 E-value=0.00051 Score=49.33 Aligned_cols=96 Identities=17% Similarity=0.158 Sum_probs=57.9
Q ss_pred CCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHHh
Q 037671 56 YSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYAIAN 135 (187)
Q Consensus 56 ~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~ 135 (187)
.++++|+++++ .++. +. ...++|++|+++++. ++.- ....++|+.|++.++.++. +..
T Consensus 38 ~~l~~LdLs~~----~L~~-----lp--~~~~~L~~L~Ls~N~-l~~l-----p~~~~~L~~L~l~~n~l~~-----l~~ 95 (353)
T d1jl5a_ 38 RQAHELELNNL----GLSS-----LP--ELPPHLESLVASCNS-LTEL-----PELPQSLKSLLVDNNNLKA-----LSD 95 (353)
T ss_dssp HTCSEEECTTS----CCSC-----CC--SCCTTCSEEECCSSC-CSSC-----CCCCTTCCEEECCSSCCSC-----CCS
T ss_pred cCCCEEEeCCC----CCCC-----CC--CCCCCCCEEECCCCC-Cccc-----ccchhhhhhhhhhhcccch-----hhh
Confidence 46888888865 3331 11 124778888887654 5421 1235688888888865542 122
Q ss_pred cCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCCCCC
Q 037671 136 SCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTRLP 177 (187)
Q Consensus 136 ~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~i~ 177 (187)
-.+.|++|+++++ .+..-. . ...+++|+.|+++++.++
T Consensus 96 lp~~L~~L~L~~n-~l~~lp--~-~~~l~~L~~L~l~~~~~~ 133 (353)
T d1jl5a_ 96 LPPLLEYLGVSNN-QLEKLP--E-LQNSSFLKIIDVDNNSLK 133 (353)
T ss_dssp CCTTCCEEECCSS-CCSSCC--C-CTTCTTCCEEECCSSCCS
T ss_pred hcccccccccccc-cccccc--c-hhhhccceeecccccccc
Confidence 2345888888875 444321 1 234678888888877553
No 44
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.60 E-value=0.00046 Score=44.38 Aligned_cols=88 Identities=15% Similarity=0.077 Sum_probs=56.8
Q ss_pred cCCCccEEEecCCCCCCHHHHHHHHhcCCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcCC
Q 037671 85 CISNLTSISLWGLTGITDKGVVQLISRASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCG 164 (187)
Q Consensus 85 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~ 164 (187)
..++|++|.+.+...++...... +...++|+.|+++++.++.-.- .....+++|++|+++++ .++.-.-. +.+ ..
T Consensus 29 ~l~~l~~L~l~~n~~l~~i~~~~-f~~l~~L~~L~Ls~N~l~~i~~-~~f~~l~~L~~L~Ls~N-~l~~l~~~-~~~-~~ 103 (156)
T d2ifga3 29 GAENLTELYIENQQHLQHLELRD-LRGLGELRNLTIVKSGLRFVAP-DAFHFTPRLSRLNLSFN-ALESLSWK-TVQ-GL 103 (156)
T ss_dssp SCSCCSEEECCSCSSCCEECGGG-SCSCCCCSEEECCSSCCCEECT-TGGGSCSCCCEEECCSS-CCSCCCST-TTC-SC
T ss_pred CccccCeeecCCCccccccCchh-hccccccCcceeeccccCCccc-ccccccccccceeccCC-CCcccChh-hhc-cc
Confidence 35788899887554454432222 2457899999999977663211 12355889999999884 55532211 122 34
Q ss_pred CCcEEEeeCCCCC
Q 037671 165 RLESINVWGTRLP 177 (187)
Q Consensus 165 ~L~~L~l~~~~i~ 177 (187)
+|+.|+|++|.+.
T Consensus 104 ~l~~L~L~~Np~~ 116 (156)
T d2ifga3 104 SLQELVLSGNPLH 116 (156)
T ss_dssp CCCEEECCSSCCC
T ss_pred cccccccCCCccc
Confidence 6999999999774
No 45
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.48 E-value=8.2e-05 Score=51.22 Aligned_cols=85 Identities=19% Similarity=0.064 Sum_probs=48.4
Q ss_pred ceeeecccccCHHHHHHHHhcCCCCcEEEeeeccCCcccchhhhhhhhhhccCCCccEEEecCCCCCCHHHHHHHHhcCC
Q 037671 34 KNLSFAGWKMDDDSTARLVGYAYSLKELEISRSRWGCQITDNGLYRMSFAKCISNLTSISLWGLTGITDKGVVQLISRAS 113 (187)
Q Consensus 34 ~~l~~~~~~l~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~l~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 113 (187)
..+++.+.+++.-. ...+..+++|+.|++++|.....+....+ ..+++++++.+..+..+...... ....++
T Consensus 32 ~~L~Ls~n~i~~l~-~~~f~~l~~L~~L~ls~n~~~~~i~~~~f------~~l~~l~~l~~~~~n~l~~~~~~-~~~~l~ 103 (242)
T d1xwdc1 32 IELRFVLTKLRVIQ-KGAFSGFGDLEKIEISQNDVLEVIEADVF------SNLPKLHEIRIEKANNLLYINPE-AFQNLP 103 (242)
T ss_dssp SEEEEESCCCCEEC-TTTTTTCTTCCEEEEESCTTCCEECSSSE------ESCTTCCEEEEECCTTCCEECTT-SEECCT
T ss_pred CEEECcCCcCCccC-hhHhhccchhhhhhhccccccceeecccc------ccccccccccccccccccccccc-cccccc
Confidence 45666666654211 11345689999999998732111222222 23577788877655434333221 224578
Q ss_pred CCCEEEecCCCCC
Q 037671 114 SLQHLNIGGTFIT 126 (187)
Q Consensus 114 ~L~~L~l~~~~~~ 126 (187)
+|+.+++.++.++
T Consensus 104 ~L~~l~l~~~~l~ 116 (242)
T d1xwdc1 104 NLQYLLISNTGIK 116 (242)
T ss_dssp TCCEEEEESCCCC
T ss_pred cccccccchhhhc
Confidence 8888888886655
No 46
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=96.23 E-value=0.0011 Score=47.48 Aligned_cols=55 Identities=16% Similarity=0.198 Sum_probs=41.5
Q ss_pred CCCCCEEEecCCCCCHHHHHHHHhcCCccceeeccCCCCCcHHHHHHHHhcCCCCcEEEeeCCCCC
Q 037671 112 ASSLQHLNIGGTFITDESLYAIANSCPQLKSIVLWSCRQVTGNGLLFLVNKCGRLESINVWGTRLP 177 (187)
Q Consensus 112 ~~~L~~L~l~~~~~~~~~~~~l~~~~~~L~~L~l~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~i~ 177 (187)
+++|++|++++|.++. +...+++|++|++++| .+++- .+.+++|++|++++|+++
T Consensus 283 ~~~L~~L~Ls~N~l~~-----lp~~~~~L~~L~L~~N-~L~~l-----~~~~~~L~~L~L~~N~L~ 337 (353)
T d1jl5a_ 283 PPSLEELNVSNNKLIE-----LPALPPRLERLIASFN-HLAEV-----PELPQNLKQLHVEYNPLR 337 (353)
T ss_dssp CTTCCEEECCSSCCSC-----CCCCCTTCCEEECCSS-CCSCC-----CCCCTTCCEEECCSSCCS
T ss_pred CCCCCEEECCCCccCc-----cccccCCCCEEECCCC-cCCcc-----ccccCCCCEEECcCCcCC
Confidence 4789999999987652 3345788999999885 56532 244678999999999775
No 47
>d1dqaa1 d.58.20.1 (A:587-703) NAD-binding domain of HMG-CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.57 E-value=26 Score=20.24 Aligned_cols=25 Identities=12% Similarity=0.250 Sum_probs=12.9
Q ss_pred HHHHHHhcCCccceeeccCCCCCcHH
Q 037671 129 SLYAIANSCPQLKSIVLWSCRQVTGN 154 (187)
Q Consensus 129 ~~~~l~~~~~~L~~L~l~~~~~~~~~ 154 (187)
....|...+|.++.+.|++ +..+|+
T Consensus 81 a~~~i~~~~p~~~~~~lsG-N~ctDK 105 (117)
T d1dqaa1 81 ALSKLHEYFPEMQILAVSG-NYCTDK 105 (117)
T ss_dssp HHHHHHHHCTTCEEEESCC-SSSCCS
T ss_pred HHHHHHHhCCCCeEEEEec-cccccc
Confidence 3344445566666666655 344443
Done!